BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 004733
         (733 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/725 (65%), Positives = 589/725 (81%), Gaps = 2/725 (0%)

Query: 10  IAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN 69
           I   +  + E L+K+N  LA L+RS H   ++ LFVQIHSS+ LKPD ++LS+TL ACAN
Sbjct: 6   IVKTTKNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACAN 65

Query: 70  LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF 129
           LR AA GNQLHAY+++ GLKAY HV NT+LS Y  ++DLVSV+RVF+EI+NPDVYSWTT 
Sbjct: 66  LRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTL 125

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           LSACTK+G + YAC +F++ P R +PV +NA+ITGC EN + +I + LFREMH+L VR D
Sbjct: 126 LSACTKLGQIGYACHLFNQTP-RMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHD 184

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            Y+FASVLS+C   LL+FGR++H+LV K+GF    SV+NAL+TMYFN G V DA +VFEE
Sbjct: 185 KYTFASVLSLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEE 244

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY 308
           A+  V D I++NVM+ GLASVGR EEALI F++M  A LRP+ELTFVSVMS+C   RV +
Sbjct: 245 AESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSH 304

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           QVHAQA+K GFEA T VSNAA+TMYSSCG +    M+F RL+EKD++SWN +I  YAQ N
Sbjct: 305 QVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGN 364

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
             R AILA+L+MQ  GI PDEFT GSLLASS  +E+V+M  A V  NG+ + I+VSNAL+
Sbjct: 365 FYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALV 424

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           SA++K+ +I+QAYQ+F+NMS  N+I+WNT+I+GFL NGF +QGL+ F ELLMS L+P+ Y
Sbjct: 425 SAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAY 484

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TLS+ LS CA IS+LRHGKQIHGY+L++ + S  SLGNA+IT+YAKCGDLD SLR+FN+M
Sbjct: 485 TLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVM 544

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +D +SWNA+ISAYAQHG+GKEAV  FKAMQD G +KPDQATFTAVLSACSHAGLVDDG
Sbjct: 545 NGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDG 604

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
           TRIF+SMVNDYGF P  DHLSC++DLLGRAGYL+EAER+INS+H++  S  WW LFSACA
Sbjct: 605 TRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACA 664

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
           AHGNLRLGRI+AG LLE EQ+ P+VYVLLSNIYAAAG WEEAAN R+L+++T V KQPGC
Sbjct: 665 AHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGC 724

Query: 729 SWIGS 733
           SWIGS
Sbjct: 725 SWIGS 729


>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/720 (59%), Positives = 555/720 (77%), Gaps = 2/720 (0%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSH--KLKPDIYSLSTTLAACANLR 71
           + ++ + LL+ N  LA L RS  Y D+L LF QIHSSH   +KPD Y+LSTTLA CAN R
Sbjct: 15  AESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFR 74

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           + AFG+QLH YA+R+GLK YPHVANT+LSLY    D VS+KR F EI+ PDVYSWTT LS
Sbjct: 75  DIAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLS 134

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           ACTKMGH++YA E+FD MP  ++  +NAMITG  E+G + + +  F EMHK+ V+ DNYS
Sbjct: 135 ACTKMGHIEYASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYS 194

Query: 192 FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           FA +LS+C   + + GRQ+HS V K+G+    SVVNALITMYF+  N+ DA +VFE  + 
Sbjct: 195 FACILSLCTKEIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTES 254

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
            V D I+YNVM+DGL  V R EEALI F+DM  A L P+ELTFVS+MS+C   +V  QVH
Sbjct: 255 EVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSIIQVAQQVH 314

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           +QA+K GFE++T V N+ ITMY+SCG+   A  +F  L EKD++SWN +IS+Y Q N G+
Sbjct: 315 SQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGK 374

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           SA+LA+L+MQ  GI PDEFTFGSLL  S FIE+VEM+HA+V+ NG+I  I++ NAL+SAY
Sbjct: 375 SAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKNGLILIIEILNALVSAY 434

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK  ++KQ+ Q+F  ++ +NII+WNT+I GFLLNG P+Q L+HFS+L+MS+L+P  +TLS
Sbjct: 435 AKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLS 494

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           + LS CA IS+L  GKQIHGY+L++   S+ SL N +IT+Y+KCG L  SLR FN+MIE+
Sbjct: 495 IVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIER 554

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SWN++ISAYAQHG+GKEAV CFKAMQD+  I PDQATFT +LSACSHAGLV++  +I
Sbjct: 555 DIVSWNSIISAYAQHGQGKEAVDCFKAMQDMPSIMPDQATFTTILSACSHAGLVEEACQI 614

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            D M+ DY  +P+ D LSC++DL+GR+GY+D+AE VI S      +  WWALFSACAAH 
Sbjct: 615 LDIMLIDYRAVPSVDQLSCIVDLIGRSGYIDQAESVIESAQYGEHTHVWWALFSACAAHE 674

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           NLRLGRI+A +LLE+E+D PSVYV+LSNIYA+AG WEEAAN+REL+K+TG +KQPGCSWI
Sbjct: 675 NLRLGRIVARILLEKERDNPSVYVVLSNIYASAGCWEEAANVRELIKKTGSMKQPGCSWI 734


>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
          Length = 690

 Score =  907 bits (2345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/725 (61%), Positives = 551/725 (76%), Gaps = 47/725 (6%)

Query: 10  IAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN 69
           I   +  + E L+K+N  LA L+RS H   ++ LFVQIHSS+ LKPD ++LS+TL ACAN
Sbjct: 12  IVKTTKNAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACAN 71

Query: 70  LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF 129
           LR AA GNQLHAY+++ GLKAY HV NT+LS Y  ++DLVSV+RVF+EI+NPDVYSWTT 
Sbjct: 72  LRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTL 131

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           LSACTK+G + YAC +F++ P R +PV +NA+ITGC EN + +I + LFREMH+L VR D
Sbjct: 132 LSACTKLGQIGYACHLFNQTP-RMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHD 190

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            Y+FASVLS+C   LL+FGR++H+LV K+GF    SV+NAL+TMYFN G V DA +VFEE
Sbjct: 191 KYTFASVLSLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEVFEE 250

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY 308
           A+  V D I++NVM+ GLASVGR EEALI F++M  A LRP+ELTFVSVMS+C   RV +
Sbjct: 251 AESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSARVSH 310

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           QVHAQA+K GFEA T VSNAA+TMYSSCG +    M+F RL                  N
Sbjct: 311 QVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLG-----------------N 353

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
             R AILA+L+MQ  GI PDEFT GSLLASS  +E+V+M  A V  NG+ + I+VSNAL+
Sbjct: 354 FYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVSNALV 413

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           SA++K+ +I+QAYQ                            GL+ F ELLMS L+P+ Y
Sbjct: 414 SAFSKHGQIEQAYQ----------------------------GLEQFYELLMSTLKPNAY 445

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TLS+ LS CA IS+LRHGKQIHGY+L++ + S  SLGNA+IT+YAKCGDLD SLR+FN+M
Sbjct: 446 TLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVM 505

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +D +SWNA+ISAYAQHG+GKEAV  FKAMQD G +KPDQATFTAVLSACSHAGLVDDG
Sbjct: 506 NGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDG 565

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
           TRIF+SMVNDYGF P  DHLSC++DLLGRAGYL+EAER+INS+H++  S  WW LFSACA
Sbjct: 566 TRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACA 625

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
           AHGNLRLGRI+AG LLE EQ+ P+VYVLLSNIYAAAG WEEAAN R+L+++T V KQPGC
Sbjct: 626 AHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGC 685

Query: 729 SWIGS 733
           SWIGS
Sbjct: 686 SWIGS 690


>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Glycine max]
          Length = 722

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/716 (57%), Positives = 542/716 (75%), Gaps = 5/716 (0%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           KE  +KLN  LA L+RS  +  +L LFV  HSS    PD Y LST + A AN R AAFG 
Sbjct: 8   KEPHIKLNHMLAALARSNQHTQSLKLFVHAHSS--FTPDHYILSTAITAAANARRAAFGA 65

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNA-RDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           QLHA A+R GL A+ HVAN++LSLY  A RDL SVK  F EI  PD YSWTT LSAC K+
Sbjct: 66  QLHALAVRTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKL 125

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
             V++A +VFD +P   + V+NA+ITGC E G  D   GLFR+M+K+ V+ D Y+FA++L
Sbjct: 126 DSVEHALKVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATML 185

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK-GYVCD 255
           S+C   L ++GR +HS+V KSGF    SVVN+LITMYF CG VVDAC+VFEEA+ G   D
Sbjct: 186 SLCSLELFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRD 245

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM 315
           ++SYN M+DG ASV R E+A + FRDM      P+E+TFVSVMS+C   R G Q  +QA+
Sbjct: 246 YVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCSSLRAGCQAQSQAI 305

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K GF    +V+NA +TMYS  G++ E   IF  ++E+D+VSWN M+S + Q NL   A+L
Sbjct: 306 KMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNIMVSMFLQENLEEEAML 365

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +YL+M+  GI PDEFT+GSLLA++  +++VEMIH+ +  +G++  I+V NAL+SAY ++ 
Sbjct: 366 SYLKMRREGIEPDEFTYGSLLAATDSLQVVEMIHSLLCKSGLV-KIEVLNALVSAYCRHG 424

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +IK+A+QIF  +  +++I+WN++I+GFL+NG P+QGL+ FS LL ++++P+ Y+LS+ LS
Sbjct: 425 KIKRAFQIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLS 484

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C+ +S++ HGKQ+HGY+L++   S++SLGNA++T+YAKCG LD +LRVF+ M+E+DTI+
Sbjct: 485 ICSSMSAMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTIT 544

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+ISAYAQHG G+EAV CF+AMQ    IKPDQATFT+VLSACSHAGLVDDG RIFD+M
Sbjct: 545 WNAIISAYAQHGRGEEAVCCFEAMQTSPGIKPDQATFTSVLSACSHAGLVDDGIRIFDTM 604

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
           V  YGF+P+ DH SC++DLLGR+GYLDEAERVI S +  A S+  W+LFSACAAHGNL L
Sbjct: 605 VKVYGFVPSVDHFSCIVDLLGRSGYLDEAERVIKSGYFGAHSNICWSLFSACAAHGNLGL 664

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +A L+LER+ + PSVYVLLSNI AAAG WEEAAN+RE+++  G IKQPGCSWI
Sbjct: 665 GRTVARLILERDHNNPSVYVLLSNICAAAGQWEEAANLREMMREFGTIKQPGCSWI 720


>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
 gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
 gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 737

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/729 (54%), Positives = 530/729 (72%), Gaps = 10/729 (1%)

Query: 8   ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAAC 67
           + IA NS T    LL LN  L  L+RSG  ++AL LF  +H    L+PD YS+S  +   
Sbjct: 12  SAIAENSTT----LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTA 67

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT 127
            +LR+  FG Q+H YA+R+GL  + HV+NT+LSLY+   +L S+K+ F EI  PDVYSWT
Sbjct: 68  RHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWT 127

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRD-LPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T LSA  K+G ++YA EVFDKMP+RD + ++NAMITGC E+GY +  + LFREMHKL VR
Sbjct: 128 TLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR 187

Query: 187 RDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            D + FA++LS+CD G L+FG+Q+HSLV K+GF    SVVNALITMYFNC  VVDAC VF
Sbjct: 188 HDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
           EE    V D +++NV++DGLA   R +E+L+ FR ML ASLRP++LTFVSVM +C C  +
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G+QVH  A+K+G+E YT VSNA +TMYSS      A  +F  L+EKD+V+WNTMIS+Y Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
             LG+SA+  Y  M  +G++PDEFTFGSLLA+S  ++++EM+ A +   G+ + I++SNA
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNA 426

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-- 484
           LISAY+KN +I++A  +F     +N+I+WN +I+GF  NGFP +GL+ FS LL SE+R  
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD YTLS  LS C   SSL  G Q H YVL++    +  +GNA+I +Y++CG +  SL V
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           FN M EKD +SWN+LISAY++HGEG+ AV+ +K MQD G++ PD ATF+AVLSACSHAGL
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV--INSQHIQARSDNWWA 662
           V++G  IF+SMV  +G I   DH SC++DLLGRAG+LDEAE +  I+ + I +R D WWA
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWA 666

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           LFSACAAHG+L+LG+++A LL+E+E+D PSVYV LSNIYA AG+W+EA   R  +   G 
Sbjct: 667 LFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGA 726

Query: 723 IKQPGCSWI 731
           +KQ GCSW+
Sbjct: 727 MKQRGCSWM 735


>gi|297816220|ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321831|gb|EFH52252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 731

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/733 (54%), Positives = 527/733 (71%), Gaps = 10/733 (1%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           R+  + I  +S T    LL LN  L  L+RSG  ++AL LF  +H    L+PD YS+S  
Sbjct: 2   RKALSAIGESSTT----LLNLNRRLTALTRSGENRNALKLFADVHRCITLRPDQYSVSLA 57

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           + A  +LR+  FG Q+H YA+R+GL  + HV+NT+LSLY    +L S+KR F EI  PDV
Sbjct: 58  ITAAGHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYARLGNLASLKRKFEEIIEPDV 117

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRD-LPVYNAMITGCTENGYEDIGIGLFREMHK 182
           YSWTT LSA  K+G ++YA EVFDKMP+RD + V+NAMITGC E+GY    I LFREMHK
Sbjct: 118 YSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAVWNAMITGCKESGYHGTSIELFREMHK 177

Query: 183 LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           L VR D + FA+VLS+C  G L+FG+Q+HSLV K+GF    SVVNALITMYFNC  VVDA
Sbjct: 178 LGVRHDKFGFATVLSMCYYGSLDFGKQVHSLVIKAGFFVASSVVNALITMYFNCQVVVDA 237

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
             VFEEA   V D +++NV++DGLA   R EE+L+ FR M+ A LRP++LTFVSVMS+C 
Sbjct: 238 RLVFEEADVAVRDQVTFNVVIDGLAGFKR-EESLLVFRQMVEAGLRPTDLTFVSVMSSCS 296

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           C  +G+QVH  ++K+G+E YT VSN+ +TMYSS      A  +F  L+EKD+++WNTMIS
Sbjct: 297 CETMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMIS 356

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQ 422
            Y Q NLG+SA+L Y  M  +G++PDEFTFGSLLASS  ++ +EM+ A V   G+ + I+
Sbjct: 357 GYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDLDALEMVQACVIKFGLSSKIE 416

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +SNALISAY+K+ +I +A  IF +   +N+I+WN +I+GF  NGF  +GL+ FS LL +E
Sbjct: 417 ISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGFYHNGFSFEGLERFSCLLEAE 476

Query: 483 LR--PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           +   PD YTLS+ LS C  ISSL  G+Q H Y L++    +  +GNA I +Y++CG L  
Sbjct: 477 VLIIPDAYTLSILLSICVDISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQK 536

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           SL VF+ M +KDT+SWN+LISAYA+HG+G+ AV  +K MQD G++ PD AT +AVLSAC 
Sbjct: 537 SLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQDEGKVDPDAATLSAVLSACG 596

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV--INSQHIQARSD 658
           HAGLV +G  IF+SMV  +G IP  DH SC++DLLGRAG+LDEAE +  I+ + I +R D
Sbjct: 597 HAGLVKEGLEIFNSMVEFHGLIPNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD 656

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            WWALFSACAAHG+L+LG+++A LL+E+E++ PSVYV LSNIYA AGLW+EA   R+ + 
Sbjct: 657 VWWALFSACAAHGDLKLGKMVARLLMEKEKNDPSVYVQLSNIYAGAGLWKEAEETRKAIN 716

Query: 719 RTGVIKQPGCSWI 731
             G +KQ GCSW+
Sbjct: 717 MIGAMKQRGCSWM 729


>gi|255579533|ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529857|gb|EEF31789.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/599 (60%), Positives = 455/599 (75%), Gaps = 1/599 (0%)

Query: 6   ITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHS-SHKLKPDIYSLSTTL 64
           +T   A N +  ++ LLKLN  LA L+ S  Y+DALHLF +I S  + LKPD Y+LSTTL
Sbjct: 14  LTEATAKNLHEQQQQLLKLNRQLAKLTHSTQYKDALHLFDKIRSLYYYLKPDHYTLSTTL 73

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            ACANL +  FGN+LHAYA+++ LK Y HVANT+LSLY  A+++ SVK VF E +NPDVY
Sbjct: 74  TACANLCDTTFGNKLHAYAIKSSLKTYTHVANTLLSLYAKAKEIDSVKWVFGETENPDVY 133

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           S+ T +SAC K+GHVDYAC +FD MP RD+ V+NA+ITGC E+G E+IG+  FR+M +  
Sbjct: 134 SYATLVSACAKLGHVDYACVLFDVMPQRDVVVWNALITGCMESGNEEIGLNYFRDMCRSG 193

Query: 185 VRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           VR DNYS ASVLS C   ++ FG Q+HSLV KSG     SV+NALITMYFNC NV+D   
Sbjct: 194 VRHDNYSLASVLSGCKLVMVNFGMQVHSLVIKSGSLVEPSVINALITMYFNCENVLDGYL 253

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VFEEA+  V D I+YNVM+DGL SVGR+EEALI  R ML + LRP+ELTFVS+MS+CL  
Sbjct: 254 VFEEAEDSVRDQITYNVMIDGLVSVGRIEEALIICRKMLGSCLRPNELTFVSLMSSCLHA 313

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            +GYQ HAQA+K GFEA TS+SNA ITMYSSC  +  A  +F RL+ KD VSWNTMIS+Y
Sbjct: 314 EIGYQFHAQAIKMGFEASTSLSNATITMYSSCKDLHAARKVFERLERKDPVSWNTMISSY 373

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS 424
            Q N GR AILAYLEM+  G  PDEFTFGSLLASS  +E VEMIHA VF N +I+NIQVS
Sbjct: 374 TQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSELLETVEMIHALVFRNSLISNIQVS 433

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL SAY+K+  ++Q+YQIF +MS R++I+WN++I+GFLLNG P+ GL+ FSEL MSE +
Sbjct: 434 NALASAYSKHGNMEQSYQIFSDMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQMSEFK 493

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            +EYTL++ LS CA I +L  GKQ+HGY++++   S++SLGN +IT YAKCG +D S RV
Sbjct: 494 SNEYTLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRV 553

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           F  + +KDT+SWNALISAYAQHG+G EA+  F+AMQ    ++PD ATF  VLSACSHA 
Sbjct: 554 FTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAMQHSSEVQPDDATFKIVLSACSHAA 612


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/711 (34%), Positives = 399/711 (56%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S++G+ ++A+HLF ++H++  + P  Y  S+ L+ C  ++    G QLHA   + G
Sbjct: 185 ISGFSQNGYEEEAIHLFCEMHTA-GIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYG 243

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V N +++LY    + VS ++VFS                               
Sbjct: 244 SSLETYVCNALVTLYSRMPNFVSAEKVFS------------------------------- 272

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           KM  +D   +N++I+G  + G+ D  + LF +M +  ++ D  + AS+LS C + G L  
Sbjct: 273 KMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCK 332

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLHS V K+G S  + V  AL+ +Y NC ++  A ++F  A+    + + +NVM+   
Sbjct: 333 GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE--NVVLWNVMLVAF 390

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
             +  + E+   FR M +  L P++ T+ S++  C       +G Q+H Q +K+GF+   
Sbjct: 391 GKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV 450

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +  I MY+  GK+D A +I   L E D+VSW  +IS YAQ NL   A+  + EM + 
Sbjct: 451 YVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNR 510

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GI+ D   F S +++   I+ +     IHA  +++G   ++ + NAL+S YA+  RIK+A
Sbjct: 511 GIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEA 570

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           Y  F  +  ++ I+WN LI+GF  +G+    L+ F+++  ++L    +T   A+S+ A I
Sbjct: 571 YLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANI 630

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++++ GKQIH  ++K    S + + NA+IT YAKCG ++ + R F  M EK+ +SWNA+I
Sbjct: 631 ANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMI 690

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y+QHG G EAV+ F+ M+ VG + P+  TF  VLSACSH GLV  G   F+SM  ++G
Sbjct: 691 TGYSQHGYGNEAVNLFEKMKQVGEM-PNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHG 749

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
            +P   H +C++DL+ RAG+L  A + I    I+  +  W  L SAC  H N+ +G   A
Sbjct: 750 LVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAA 809

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E +  + YVLLSN+YA +G W+     R++++  GV K+PG SWI
Sbjct: 810 QHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWI 860



 Score =  286 bits (732), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 187/629 (29%), Positives = 316/629 (50%), Gaps = 48/629 (7%)

Query: 53  LKPDIYSLSTTLAACANLR-NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           + P   S ++ L AC+  R    +  Q+HA  +  GL   P ++N ++ LY     ++S 
Sbjct: 107 VSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISA 166

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           ++VF  +   D  SW                                AMI+G ++NGYE+
Sbjct: 167 RKVFDNLCTKDSVSWV-------------------------------AMISGFSQNGYEE 195

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
             I LF EMH   +    Y F+SVLS C    L + G QLH+LV K G S    V NAL+
Sbjct: 196 EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALV 255

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           T+Y    N V A KVF + +    D +S+N ++ GLA  G  + AL  F  M    L+P 
Sbjct: 256 TLYSRMPNFVSAEKVFSKMQSK--DEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313

Query: 291 ELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            +T  S++SAC     LC   G Q+H+  +K+G  +   V  A + +Y +C  I  A  +
Sbjct: 314 CVTVASLLSACASNGALCK--GEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F   Q +++V WN M+  + + +    +   + +MQ  G+ P++FT+ S+L    S G +
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           ++ E IH  V   G   N+ V + LI  YAK+ ++  A+ I   ++  ++++W  LI+G+
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGY 491

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +    + L+HF E+L   ++ D    S A+S+CA I +L  G+QIH     +     +
Sbjct: 492 AQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDL 551

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           S+GNA+++LYA+CG +  +   F  +  KD+ISWN LIS +AQ G  ++A+  F  M + 
Sbjct: 552 SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQM-NR 610

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
            +++    TF + +SA ++   +  G +I  +M+   GF    +  + ++    + G ++
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQI-HAMIIKRGFDSDIEVSNALITFYAKCGSIE 669

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHG 671
           +A R    +  +    +W A+ +  + HG
Sbjct: 670 DARREF-CEMPEKNDVSWNAMITGYSQHG 697



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 180/619 (29%), Positives = 303/619 (48%), Gaps = 49/619 (7%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
           +G +D   +VF+ MP+R +  ++ +I+G  E    +  + LF  M + +V     SFASV
Sbjct: 58  LGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASV 117

Query: 196 LSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L  C      + +  Q+H+ +   G  C   + N LI +Y   G ++ A KVF+     +
Sbjct: 118 LRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDN----L 173

Query: 254 C--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGY 308
           C  D +S+  M+ G +  G  EEA+  F +M  A + P+   F SV+S C   +   VG 
Sbjct: 174 CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGE 233

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA   K G    T V NA +T+YS       A  +F+++Q KD VS+N++IS  AQ+ 
Sbjct: 234 QLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQG 293

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
               A+  + +M+   ++PD  T  SLL   AS+G +   E +H++V   GI +++ V  
Sbjct: 294 FSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEG 353

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+  Y     IK A+++F      N++ WN ++  F       +  + F ++ +  L P
Sbjct: 354 ALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP 413

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +++T    L +C  + +L  G+QIH  V+K      + + + +I +YAK G LD +  + 
Sbjct: 414 NQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL 473

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             + E D +SW ALIS YAQH    EA+  FK M + G I+ D   F++ +SAC+    +
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRG-IQSDNIGFSSAISACAGIQAL 532

Query: 606 DDGTRIF-DSMVNDYG---------------------------FIPAEDHLSC--MLDLL 635
           + G +I   S V+ Y                             I A+D +S   ++   
Sbjct: 533 NQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGF 592

Query: 636 GRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP- 691
            ++GY ++A +V   +N   ++A    + +  SA A   N++ G+ I  ++++R  D   
Sbjct: 593 AQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDI 652

Query: 692 SVYVLLSNIYAAAGLWEEA 710
            V   L   YA  G  E+A
Sbjct: 653 EVSNALITFYAKCGSIEDA 671



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 245/488 (50%), Gaps = 13/488 (2%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           ++  +L +C ++G L   ++LH  + K GF     + N L+ +YF  G++    KVFE+ 
Sbjct: 12  TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY- 308
                   S++ ++ G          L  F  M+  ++ P+E++F SV+ AC   R+G  
Sbjct: 72  PNRSVR--SWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIR 129

Query: 309 ---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
              Q+HA+ +  G      +SN  I +Y+  G I  A  +F  L  KD VSW  MIS ++
Sbjct: 130 YAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFS 189

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQ 422
           Q      AI  + EM + GI P  + F S+L+    I++    E +HA VF  G      
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V NAL++ Y++      A ++F  M  ++ +++N+LI+G    GF    L+ F+++    
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDY 309

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           L+PD  T++  LS+CA   +L  G+Q+H YV+K  + S M +  A++ LY  C D+  + 
Sbjct: 310 LKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAH 369

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F     ++ + WN ++ A+ +     E+   F+ MQ  G I P+Q T+ ++L  C+  
Sbjct: 370 EMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI-PNQFTYPSILRTCTSV 428

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           G +D G +I   ++   GF       S ++D+  + G LD A  ++ +   +    +W A
Sbjct: 429 GALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL-TEDDVVSWTA 486

Query: 663 LFSACAAH 670
           L S  A H
Sbjct: 487 LISGYAQH 494


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 249/724 (34%), Positives = 402/724 (55%), Gaps = 42/724 (5%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N ++  +   N  +    + G+ ++AL L  ++   H L     +    L++C +     
Sbjct: 203 NHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQ-HGLALGRATTMRLLSSCKSPSALE 261

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H  A++A L    +VAN IL++Y                                
Sbjct: 262 CGREIHVEAMKARLLFDVNVANCILNMY-------------------------------A 290

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +  A EVFDKM  + +  +  +I G  + G+ +I   +F++M +  V  +  ++ +
Sbjct: 291 KCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYIN 350

Query: 195 VLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL+       L++G+ +HS +  +G    ++V  AL+ MY  CG+  D  +VFE+     
Sbjct: 351 VLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNR- 409

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQV 310
            D I++N M+ GLA  G  EEA   +  M    + P+++T+V +++AC+ P     G ++
Sbjct: 410 -DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREI 468

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H++ +K GF    SV NA I+MY+ CG I +A ++F ++  KDI+SW  MI   A+  LG
Sbjct: 469 HSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLG 528

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  + +MQ  G++P+  T+ S+L   +S   ++    IH  V   G+ T+  V+N L
Sbjct: 529 AEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTL 588

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           ++ Y+    +K A Q+F  M+ R+I+ +N +I G+  +    + L+ F  L    L+PD+
Sbjct: 589 VNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDK 648

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T    L++CA   SL   K+IH  VLK+  +S  SLGNA+++ YAKCG    +L VF+ 
Sbjct: 649 VTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDK 708

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M++++ ISWNA+I   AQHG G++ +  F+ M+  G IKPD  TF ++LSACSHAGL+++
Sbjct: 709 MMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG-IKPDIVTFVSLLSACSHAGLLEE 767

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G R F SM  D+G  P  +H  CM+DLLGRAG LDE E +I +   QA +  W AL  AC
Sbjct: 768 GRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGAC 827

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGN+ +    A   L+ + D  +VYV LS++YAAAG+W+ AA +R+L+++ GV K+PG
Sbjct: 828 RIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPG 887

Query: 728 CSWI 731
            SWI
Sbjct: 888 RSWI 891



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 181/646 (28%), Positives = 334/646 (51%), Gaps = 33/646 (5%)

Query: 106 RDLVSVKRVFSEIQNP----DVYSWTTFLSACTKMGHVDYACEVFDKM--PDRDLPVYNA 159
           +DLV+ + V   I       D Y+    ++   + G ++ A +V++K+   +R +  +NA
Sbjct: 155 KDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNA 214

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG 218
           M+ G  + GY +  + L REM +  +     +   +LS C +   LE GR++H    K+ 
Sbjct: 215 MVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKAR 274

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEAL 276
               V+V N ++ MY  CG++ +A +VF+  E K  V    S+ +++ G A  G  E A 
Sbjct: 275 LLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVV----SWTIIIGGYADCGHSEIAF 330

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F+ M    + P+ +T+++V++A   P   + G  VH+  + +G E+  +V  A + MY
Sbjct: 331 EIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMY 390

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG   +   +F +L  +D+++WNTMI   A+      A   Y +MQ  G+ P++ T+ 
Sbjct: 391 AKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYV 450

Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
            LL    +   +     IH+ V  +G + +I V NALIS YA+   IK A  +F+ M  +
Sbjct: 451 ILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK 510

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           +II+W  +I G   +G   + L  F ++  + L+P+  T +  L++C+  ++L  G++IH
Sbjct: 511 DIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIH 570

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             V++  L +   + N ++ +Y+ CG +  + +VF+ M ++D +++NA+I  YA H  GK
Sbjct: 571 QQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGK 630

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           EA+  F  +Q+ G +KPD+ T+  +L+AC+++G ++    I   ++ D G++      + 
Sbjct: 631 EALKLFDRLQEEG-LKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLGNA 688

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL--LEREQ 688
           ++    + G   +A  V + + ++    +W A+   CA HG    G+ +  L   ++ E 
Sbjct: 689 LVSTYAKCGSFSDALLVFD-KMMKRNVISWNAIIGGCAQHGR---GQDVLQLFERMKMEG 744

Query: 689 DKPSVYVLLSNIYAA--AGLWEEAANIRELLKR----TGVIKQPGC 728
            KP +   +S + A   AGL EE       + R    T  I+  GC
Sbjct: 745 IKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 248/704 (35%), Positives = 386/704 (54%), Gaps = 42/704 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G+ + AL L  Q+   H L PD  ++ + L++C +     +G ++H  A++AGL     V
Sbjct: 105 GYIEKALKLLRQMQQ-HGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKV 163

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN IL++Y                                K G ++ A EVFDKM  + +
Sbjct: 164 ANCILNMY-------------------------------AKCGSIEEAREVFDKMEKKSV 192

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSL 213
             +   I G  + G  +    +F++M +  V  +  ++ SVL+       L++G+ +HS 
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           +  +G     +V  AL+ MY  CG+  D  +VFE+      D I++N M+ GLA  G  E
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR--DLIAWNTMIGGLAEGGYWE 310

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           EA   +  M    + P+++T+V +++AC+       G ++H++  K+GF +   V NA I
Sbjct: 311 EASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALI 370

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           +MYS CG I +A ++F ++  KD++SW  MI   A+   G  A+  Y EMQ  G+ P+  
Sbjct: 371 SMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRV 430

Query: 391 TFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T+ S+L   +S   +E    IH  V   G+ T+  V N L++ Y+    +K A Q+F  M
Sbjct: 431 TYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM 490

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             R+I+ +N +I G+  +    + L+ F  L    L+PD+ T    L++CA   SL   +
Sbjct: 491 IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAR 550

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           +IH  V K    S  S+GNA+++ YAKCG    +  VF  M +++ ISWNA+I   AQHG
Sbjct: 551 EIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHG 610

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
            G++A+  F+ M+  G +KPD  TF ++LSACSHAGL+++G R F SM  D+  IP  +H
Sbjct: 611 RGQDALQLFERMKMEG-VKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEH 669

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
             CM+DLLGRAG LDEAE +I +   QA +  W AL  AC  HGN+ +    A   L+ +
Sbjct: 670 YGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLD 729

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            D   VYV LS++YAAAG+W+ AA +R+L+++ GV K+PG SWI
Sbjct: 730 LDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWI 773



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 181/623 (29%), Positives = 331/623 (53%), Gaps = 27/623 (4%)

Query: 106 RDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMP--DRDLPVYNA 159
           +DLV+ ++V   I      PD Y+    ++   + G ++ A +V+ K+   +R +  +NA
Sbjct: 37  KDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNA 96

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG 218
           M+ G  + GY +  + L R+M +  +  D  +  S LS C + G LE+GR++H    ++G
Sbjct: 97  MVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAG 156

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
               V V N ++ MY  CG++ +A +VF++ +      +S+ + + G A  GR E A   
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSV--VSWTITIGGYADCGRSETAFEI 214

Query: 279 FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F+ M    + P+ +T++SV++A   P   + G  VH++ + +G E+ T+V  A + MY+ 
Sbjct: 215 FQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAK 274

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG   +   +F +L  +D+++WNTMI   A+      A   Y +MQ  G+ P++ T+  L
Sbjct: 275 CGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVIL 334

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L    +S  +   + IH+ V   G  ++I V NALIS Y++   IK A  +F  M  +++
Sbjct: 335 LNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDV 394

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           I+W  +I G   +GF  + L  + E+  + + P+  T +  L++C+  ++L  G++IH  
Sbjct: 395 ISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQ 454

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           V++  L +   +GN ++ +Y+ CG +  + +VF+ MI++D +++NA+I  YA H  GKEA
Sbjct: 455 VVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEA 514

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F  +Q+ G +KPD+ T+  +L+AC+++G + +  R   ++V   GF       + ++
Sbjct: 515 LKLFDRLQEEG-LKPDKVTYINMLNACANSGSL-EWAREIHTLVRKGGFFSDTSVGNALV 572

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER---EQD 689
               + G   +A  ++  +  +    +W A+    A HG  +     A  L ER   E  
Sbjct: 573 STYAKCGSFSDAS-IVFEKMTKRNVISWNAIIGGSAQHGRGQ----DALQLFERMKMEGV 627

Query: 690 KPSVYVLLSNIYAA--AGLWEEA 710
           KP +   +S + A   AGL EE 
Sbjct: 628 KPDIVTFVSLLSACSHAGLLEEG 650



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 156/559 (27%), Positives = 275/559 (49%), Gaps = 43/559 (7%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ ++   I++   +  G  + A  +F Q      + P+  +  + L A ++     +G 
Sbjct: 189 KKSVVSWTITIGGYADCGRSETAFEIF-QKMEQEGVVPNRITYISVLNAFSSPAALKWGK 247

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H+  L AG ++   V   ++ +Y         ++VF ++ N D+ +W T +    + G
Sbjct: 248 AVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGG 307

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           + + A EV++                               +M +  V  +  ++  +L+
Sbjct: 308 YWEEASEVYN-------------------------------QMQREGVMPNKITYVILLN 336

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C ++  L +G+++HS V K+GF+  + V NALI+MY  CG++ DA  VF+  K    D 
Sbjct: 337 ACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD--KMVRKDV 394

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           IS+  M+ GLA  G   EAL  +++M  A + P+ +T+ S+++AC  P     G ++H Q
Sbjct: 395 ISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQ 454

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +++G      V N  + MYS CG + +A  +F R+ ++DIV++N MI  YA  NLG+ A
Sbjct: 455 VVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEA 514

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  +Q  G++PD+ T+ ++L   A+SG +E    IH  V   G  ++  V NAL+S 
Sbjct: 515 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVST 574

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK      A  +F  M+ RN+I+WN +I G   +G     LQ F  + M  ++PD  T 
Sbjct: 575 YAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTF 634

Query: 491 SVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLD-CSLRVFNMM 548
              LS+C+    L  G++    + ++  +I  +     M+ L  + G LD     +  M 
Sbjct: 635 VSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMP 694

Query: 549 IEKDTISWNALISAYAQHG 567
            + +T  W AL+ A   HG
Sbjct: 695 FQANTRIWGALLGACRIHG 713



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/526 (29%), Positives = 276/526 (52%), Gaps = 18/526 (3%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GRQ+H  + +         VNALI MY  CG++ +A +V+++         S+N M+ G 
Sbjct: 42  GRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGY 101

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
              G +E+AL   R M    L P   T +S +S+C  P     G ++H QAM++G     
Sbjct: 102 IQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDV 161

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+N  + MY+ CG I+EA  +F ++++K +VSW   I  YA      +A   + +M+  
Sbjct: 162 KVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQE 221

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ P+  T+ S+L   +S   ++  + +H+ +   G  ++  V  AL+  YAK    K  
Sbjct: 222 GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDC 281

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            Q+F  +  R++I WNT+I G    G+  +  + ++++    + P++ T  + L++C   
Sbjct: 282 RQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNS 341

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++L  GK+IH  V K    S + + NA+I++Y++CG +  +  VF+ M+ KD ISW A+I
Sbjct: 342 AALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMI 401

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
              A+ G G EA++ ++ MQ  G ++P++ T+T++L+ACS    ++ G RI   +V    
Sbjct: 402 GGLAKSGFGAEALTVYQEMQQAG-VEPNRVTYTSILNACSSPAALEWGRRIHQQVVE--A 458

Query: 621 FIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
            +  + H+ + ++++    G + +A +V + + IQ     + A+    AAH    LG+  
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFD-RMIQRDIVAYNAMIGGYAAH---NLGKEA 514

Query: 680 AGLL--LEREQDKPS--VYVLLSNIYAAAGLWEEAANIRELLKRTG 721
             L   L+ E  KP    Y+ + N  A +G  E A  I  L+++ G
Sbjct: 515 LKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGG 560



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 232/489 (47%), Gaps = 55/489 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +  L+  G++++A  ++ Q+     + P+  +    L AC N     +G ++H
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQRE-GVMPNKITYVILLNACVNSAALHWGKEIH 351

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +   +AG  +   V N ++S+Y     +   + VF ++   DV SWT             
Sbjct: 352 SRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWT------------- 398

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                             AMI G  ++G+    + +++EM +  V  +  ++ S+L+ C 
Sbjct: 399 ------------------AMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACS 440

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   LE+GR++H  V ++G +    V N L+ MY  CG+V DA +VF+  +    D ++Y
Sbjct: 441 SPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFD--RMIQRDIVAY 498

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           N M+ G A+    +EAL  F  +    L+P ++T++++++AC          ++H    K
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRK 558

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            GF + TSV NA ++ Y+ CG   +A ++F ++ +++++SWN +I   AQ   G+ A+  
Sbjct: 559 GGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQL 618

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIE-----MVEMIHAFVFINGIITNIQVSNALI 428
           +  M+  G++PD  TF SLL++   +G +E        M   F     II  I+    ++
Sbjct: 619 FERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDF----AIIPTIEHYGCMV 674

Query: 429 SAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG-FPVQGLQHFSELLMSELRPD 486
               +  ++ +A  +   M  + N   W  L+    ++G  PV      S L   +L  D
Sbjct: 675 DLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSL---KLDLD 731

Query: 487 EYTLSVALS 495
              + VALS
Sbjct: 732 NAVVYVALS 740



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 86/159 (54%), Gaps = 6/159 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEK 551
           L  C  +  L  G+Q+H +++++  +      NA+I +Y +CG ++ + +V+  +  +E+
Sbjct: 30  LKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMER 89

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              SWNA++  Y Q+G  ++A+   + MQ  G + PD+ T  + LS+C   G ++ G  I
Sbjct: 90  TVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG-LAPDRTTIMSFLSSCKSPGALEWGREI 148

Query: 612 -FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            F +M    G +      +C+L++  + G ++EA  V +
Sbjct: 149 HFQAM--QAGLLFDVKVANCILNMYAKCGSIEEAREVFD 185


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 250/727 (34%), Positives = 398/727 (54%), Gaps = 50/727 (6%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           + L LK ++S    ++ LS++G   +A+ LF Q+H S  + P  Y  S+ L+AC  +   
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI-PTPYVFSSVLSACTKIELF 229

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G QLH + ++ GL +   V N +++LY    +L++ +++FS                 
Sbjct: 230 KLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFS----------------- 272

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                         KM  RD   YN++I+G  + G+ D  + LF +M    ++ D  + A
Sbjct: 273 --------------KMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVA 318

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAK 250
           S+LS C   G    G+QLHS V K G S  + +  +L+ +Y  C ++  A + F   E +
Sbjct: 319 SLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETE 378

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG 307
             V     +NVM+     +G + E+   F  M +  L P++ T+ S++  C       +G
Sbjct: 379 NVVL----WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLG 434

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+H Q +KSGF+    V +  I MY+  G++D A  I  RL+E+D+VSW  MI+ Y Q 
Sbjct: 435 EQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQH 494

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
           +L   A+  + EM++ GIR D   F S +++   I+ +   + IHA  +I+G   ++ + 
Sbjct: 495 DLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIG 554

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL+S YA+  R + AY  F  +  ++ I+WN LI+GF  +G   + LQ FS++  + + 
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            + +T   A+S+ A  ++++ GKQIH  ++K    S+    N +ITLY+KCG ++ + R 
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKRE 674

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  M EK+ +SWNA+I+ Y+QHG G EAVS F+ M+ +G + P+  TF  VLSACSH GL
Sbjct: 675 FFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLG-LMPNHVTFVGVLSACSHVGL 733

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           V++G   F SM  ++G +P  +H  C++DLLGRA  L  A   I    I+  +  W  L 
Sbjct: 734 VNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLL 793

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           SAC  H N+ +G   A  LLE E +  + YVLLSN+YA +G W+     R+++K  GV K
Sbjct: 794 SACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKK 853

Query: 725 QPGCSWI 731
           +PG SWI
Sbjct: 854 EPGRSWI 860



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 189/631 (29%), Positives = 316/631 (50%), Gaps = 46/631 (7%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           +  + PD  + ++ L AC+  + A F    Q+HA  +  G  + P V N ++ LY     
Sbjct: 104 TENVTPDESTFASVLRACSGGK-APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLY----- 157

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
                                     +K GHVD A  VF+++  +D   + AMI+G ++N
Sbjct: 158 --------------------------SKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVV 226
           G ED  I LF +MHK  V    Y F+SVLS C    L + G QLH  + K G S    V 
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NAL+T+Y   GN++ A ++F  +K +  D ISYN ++ GLA  G  + AL  F  M +  
Sbjct: 252 NALVTLYSRWGNLIAAEQIF--SKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309

Query: 287 LRPSELTFVSVMSACLCPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           ++P  +T  S++SAC     GY   Q+H+  +K G  +   +  + + +Y  C  I+ A 
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
             F   + +++V WN M+  Y Q      +   +L+MQ  G+ P+++T+ S+L    S G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +++ E IH  V  +G   N+ V + LI  YAK+  +  A  I   +   ++++W  +I 
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  +    + L+ F E+    +R D    S A+S+CA I +L  G+QIH     +    
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            +S+GNA+++LYA+CG    +   F  +  KD ISWNALIS +AQ G  +EA+  F  M 
Sbjct: 550 DLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMN 609

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G ++ +  TF + +SA ++   +  G +I   M+   G+    +  + ++ L  + G 
Sbjct: 610 QAG-VEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGS 667

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +++A+R    +  +    +W A+ +  + HG
Sbjct: 668 IEDAKREF-FEMPEKNVVSWNAMITGYSQHG 697



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 175/624 (28%), Positives = 315/624 (50%), Gaps = 47/624 (7%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G VD A ++FD +P  ++  +N +I+G          +GLF  M   +V  D  +FASVL
Sbjct: 59  GEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118

Query: 197 SVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
             C  G   F    Q+H+ +   GF     V N LI +Y   G+V  A  VFE  + ++ 
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFE--RLFLK 176

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVH 311
           D +S+  M+ GL+  GR +EA++ F  M  +++ P+   F SV+SAC      ++G Q+H
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +K G  + T V NA +T+YS  G +  A  IF+++  +D +S+N++IS  AQR    
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSD 296

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  + +MQ   ++PD  T  SLL   AS G     + +H++V   G+ +++ +  +L+
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K   I+ A++ F      N++ WN ++  +   G   +    F ++ +  L P++Y
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T    L +C  + +L  G+QIH  V+K+     + + + +I +YAK G+LD +  +   +
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            E+D +SW A+I+ Y QH    EA+  F+ M++ G I+ D   F++ +SAC+    ++ G
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG-IRSDNIGFSSAISACAGIQALNQG 535

Query: 609 TRIF---------------DSMVNDYGF-------------IPAEDHLS--CMLDLLGRA 638
            +I                +++V+ Y               I A+D++S   ++    ++
Sbjct: 536 QQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQS 595

Query: 639 GYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS-VY 694
           G+ +EA +V   +N   ++A    + +  SA A   N++ G+ I  ++++   D  +   
Sbjct: 596 GHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEAS 655

Query: 695 VLLSNIYAAAGLWEEAANIRELLK 718
            +L  +Y+  G  E+A   RE  +
Sbjct: 656 NVLITLYSKCGSIEDAK--REFFE 677



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 250/479 (52%), Gaps = 14/479 (2%)

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  +R +  ++  +   C ++G L   ++LH+ + KSGF     + + LI +Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 239 VVDACKVFEEAKGYVCDHISY-NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           V +A K+F++       ++S+ N ++ GL +     + L  F  M+  ++ P E TF SV
Sbjct: 61  VDNAIKLFDDIPS---SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117

Query: 298 MSACLCPRVGYQV----HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           + AC   +  +QV    HA+ +  GF +   V N  I +YS  G +D A ++F RL  KD
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHA 410
            VSW  MIS  +Q      AIL + +M    + P  + F S+L++   IE+    E +H 
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           F+   G+ +   V NAL++ Y++   +  A QIF  M  R+ I++N+LI+G    GF  +
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            LQ F ++ +  ++PD  T++  LS+CA + +   GKQ+H YV+K  + S + +  +++ 
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LY KC D++ +   F     ++ + WN ++ AY Q G   E+   F  MQ  G + P+Q 
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQY 416

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           T+ ++L  C+  G +D G +I   ++   GF       S ++D+  + G LD A  ++ 
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQ 474


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/735 (32%), Positives = 401/735 (54%), Gaps = 51/735 (6%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           GN+N++K++  ++        N+ L    +   Y++A  L  Q+     +KPD Y+    
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQM-VQDGVKPDKYTFVYM 211

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA+ +N   G +L +  L AG                                + D+
Sbjct: 212 LNACADAKNVDKGGELFSLILNAGW-------------------------------DTDL 240

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +  T  ++   K G VD A +VF+ +P RDL  + +MITG   +        LF+ M + 
Sbjct: 241 FVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEE 300

Query: 184 DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V+ D  +F S+L  C+    LE G+++H+ + + G    + V  AL++MY  CG++ DA
Sbjct: 301 GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDA 360

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF   KG   + +S+  M+ G A  GR+EEA + F  M+ + + P+ +TF+S++ AC 
Sbjct: 361 LEVFNLVKGR--NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACS 418

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P   + G Q+H + +K+G+     V  A ++MY+ CG + +A  +F R+ ++++V+WN 
Sbjct: 419 RPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNA 478

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           MI+ Y Q     +A+  +  +   GI+PD  TF S+L    S   +E+ + + + +   G
Sbjct: 479 MITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG 538

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             +++ + NAL+S +     +  A  +F++M  R++++WNT+I GF+ +G       +F 
Sbjct: 539 FESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFK 598

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +  S ++PD+ T +  L++CA   +L  G+++H  + +  L   + +G  +I++Y KCG
Sbjct: 599 MMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCG 658

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +D +  VF+ + +K+  SW ++I+ YAQHG GKEA+  F  MQ  G +KPD  TF   L
Sbjct: 659 SIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEG-VKPDWITFVGAL 717

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SAC+HAGL+ +G   F+SM  D+   P  +H  CM+DL GRAG L EA   IN   ++  
Sbjct: 718 SACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPD 776

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           S  W AL  AC  H ++ L   +A   LE + +   VYV+LSNIYAAAG+W+E   +R++
Sbjct: 777 SRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKV 836

Query: 717 LKRTGVIKQPGCSWI 731
           +   GV+K+PG SWI
Sbjct: 837 MLDRGVVKKPGQSWI 851



 Score =  299 bits (765), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 202/725 (27%), Positives = 359/725 (49%), Gaps = 65/725 (8%)

Query: 12  GNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR 71
           GN     +   + N  L  LS++G   +A+ + + + S H ++    + S+ L  C   +
Sbjct: 60  GNEFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPH-IQIHRQTYSSLLQLCIKHK 118

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           N   G ++H            H+                    FS+IQ PD++ W   +S
Sbjct: 119 NLGDGERIHN-----------HIK-------------------FSKIQ-PDIFMWNMLIS 147

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
              K G+ + A ++FD+MPD+D+  +N ++ G  ++   +    L  +M +  V+ D Y+
Sbjct: 148 MYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYT 207

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           F  +L+ C DA  ++ G +L SL+  +G+   + V  ALI M+  CG V DA KVF    
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLP 267

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---G 307
               D I++  M+ GLA   + ++A   F+ M    ++P ++ FVS++ AC  P     G
Sbjct: 268 RR--DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQG 325

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            +VHA+  + G +    V  A ++MY+ CG +++A  +F  ++ +++VSW  MI+ +AQ 
Sbjct: 326 KRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVS 424
                A L + +M   GI P+  TF S+L +      ++    IH  +   G IT+ +V 
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            AL+S YAK   +  A  +F  +S +N++ WN +I  ++ +      +  F  LL   ++
Sbjct: 446 TALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD  T +  L+ C    +L  GK +   +++    S + + NA+++++  CGDL  ++ +
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           FN M E+D +SWN +I+ + QHGE + A   FK MQ+ G +KPDQ TFT +L+AC+    
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG-VKPDQITFTGLLNACASPEA 624

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSC-------MLDLLGRAGYLDEAERVINSQHIQARS 657
           + +G R+       +  I  E  L C       ++ +  + G +D+A  V ++   +   
Sbjct: 625 LTEGRRL-------HALI-TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNV 675

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KPSVYVLLSNIYAA--AGLWEEAANI 713
            +W ++ +  A HG    G+    L  + +Q+  KP     +  + A   AGL +E  + 
Sbjct: 676 YSWTSMITGYAQHGR---GKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHH 732

Query: 714 RELLK 718
            E +K
Sbjct: 733 FESMK 737



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 234/472 (49%), Gaps = 16/472 (3%)

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
           N  ++ L+  G++ EA++    +    ++    T+ S++  C+  +    G ++H     
Sbjct: 73  NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S  +    + N  I+MY+ CG  + A  IF  + +KD+ SWN ++  Y Q      A   
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRL 192

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   G++PD++TF  +L   A +  ++    + + +   G  T++ V  ALI+ + K
Sbjct: 193 HEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIK 252

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +  A ++F+N+  R++ITW ++I G   +    Q    F  +    ++PD+      
Sbjct: 253 CGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +C    +L  GK++H  + +  L +++ +G A++++Y KCG ++ +L VFN++  ++ 
Sbjct: 313 LKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNV 372

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW A+I+ +AQHG  +EA   F  M + G I+P++ TF ++L ACS    +  G +I D
Sbjct: 373 VSWTAMIAGFAQHGRMEEAFLFFNKMIESG-IEPNRVTFMSILGACSRPSALKQGRQIHD 431

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAH 670
            ++   G+I  +   + +L +  + G L +A  V   I+ Q++ A    W A+ +A   H
Sbjct: 432 RIIK-AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVA----WNAMITAYVQH 486

Query: 671 GNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
                       LL E  +   S +  + N+  +    E    ++ L+ R G
Sbjct: 487 EKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG 538


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/735 (31%), Positives = 405/735 (55%), Gaps = 51/735 (6%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           GN+ ++K++   +        N+ L    + G Y++A  L  Q+     +KPD  +  + 
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM-VQDSVKPDKRTFVSM 217

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA+ RN   G +L+   L+AG                                + D+
Sbjct: 218 LNACADARNVDKGRELYNLILKAGW-------------------------------DTDL 246

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +  T  ++   K G +  A +VFD +P RDL  + +MITG   +G       LF+ M + 
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306

Query: 184 DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V+ D  +F S+L  C+    LE G+++H+ + + G+   + V  A+++MY  CG++ DA
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+  KG   + +S+  M+ G A  GR++EA + F  M+ + + P+ +TF+S++ AC 
Sbjct: 367 LEVFDLVKGR--NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P   + G Q+    +++G+ +   V  A ++MY+ CG + +A  +F ++ ++++V+WN 
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           MI+ Y Q     +A+  +  +   GI+P+  TF S+L    SS  +E+ + +H  +   G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           + +++ VSNAL+S +     +  A  +F++M  R++++WNT+I GF+ +G       +F 
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +  S ++PD+ T +  L++CA   +L  G+++H  + +      + +G  +I++Y KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++ + +VF+ + +K+  SW ++I+ YAQHG GKEA+  F  MQ  G +KPD  TF   L
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEG-VKPDWITFVGAL 723

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SAC+HAGL+++G   F SM  ++   P  +H  CM+DL GRAG L+EA   I    ++  
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           S  W AL  AC  H N+ L    A   LE + +   V+V+LSNIYAAAG+W+E A +R++
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842

Query: 717 LKRTGVIKQPGCSWI 731
           +   GV+K+PG SWI
Sbjct: 843 MLDRGVVKKPGQSWI 857



 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 195/701 (27%), Positives = 364/701 (51%), Gaps = 55/701 (7%)

Query: 23  KLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIY--SLSTTLAACANLRNAAFGNQLH 80
           K N  L  LS++G + +A+ +  ++ SSH     IY  + S  L  C   +N   G +++
Sbjct: 77  KANAVLNRLSKAGQFNEAMQVLERVDSSH---IQIYRQTYSALLQLCIKFKNLGDGERIY 133

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +  ++G++                               PD++ W T ++   K G+  
Sbjct: 134 NHIKKSGVQ-------------------------------PDIFMWNTLINMYAKCGNTI 162

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A ++FD M ++D+  +N ++ G  ++G  +    L  +M +  V+ D  +F S+L+ C 
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           DA  ++ GR+L++L+ K+G+   + V  ALI M+  CG++ DA KVF+       D +++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP--TRDLVTW 280

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             M+ GLA  GR ++A   F+ M    ++P ++ FVS++ AC  P     G +VHA+  +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G++    V  A ++MY+ CG +++A  +F  ++ +++VSW  MI+ +AQ      A L 
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   GI P+  TF S+L   +S   ++  + I   +   G  ++ +V  AL+S YAK
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +K A+++F  +S +N++ WN +I  ++ +      L  F  LL   ++P+  T +  
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L+ C    SL  GK +H  ++K  L S + + NA+++++  CGDL  +  +FN M ++D 
Sbjct: 521 LNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN +I+ + QHG+ + A   FK MQ+ G IKPD+ TFT +L+AC+    + +G R+  
Sbjct: 581 VSWNTIIAGFVQHGKNQVAFDYFKMMQESG-IKPDKITFTGLLNACASPEALTEGRRLH- 638

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +++ +  F       + ++ +  + G +++A +V + +  +    +W ++ +  A HG  
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFH-KLPKKNVYSWTSMITGYAQHGR- 696

Query: 674 RLGRIIAGLLLEREQD--KPSVYVLLSNIYAA--AGLWEEA 710
             G+    L  + +Q+  KP     +  + A   AGL EE 
Sbjct: 697 --GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 223/437 (51%), Gaps = 19/437 (4%)

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
           C VF + K    D    N +++ L+  G+  EA+     +  + ++    T+ +++  C+
Sbjct: 66  CVVFADIK----DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCI 121

Query: 303 CPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             +    G +++    KSG +    + N  I MY+ CG    A  IF  ++EKD+ SWN 
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           ++  Y Q  L   A   + +M    ++PD+ TF S+L   A +  ++    ++  +   G
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             T++ V  ALI+ + K   I  A ++F N+  R+++TW ++I G   +G   Q    F 
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +    ++PD+      L +C    +L  GK++H  + +    +++ +G A++++Y KCG
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++ +L VF+++  ++ +SW A+I+ +AQHG   EA   F  M + G I+P++ TF ++L
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSIL 420

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHI 653
            ACS    +  G +I D ++ + G+   +   + +L +  + G L +A RV   I+ Q++
Sbjct: 421 GACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV 479

Query: 654 QARSDNWWALFSACAAH 670
            A    W A+ +A   H
Sbjct: 480 VA----WNAMITAYVQH 492



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 175/357 (49%), Gaps = 43/357 (12%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-----RNLGRSAILAY 377
           T  +NA +   S  G+ +EA  +  R+    I  +    S   Q     +NLG    + Y
Sbjct: 75  TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI-Y 133

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
             ++  G++PD F +                                N LI+ YAK    
Sbjct: 134 NHIKKSGVQPDIFMW--------------------------------NTLINMYAKCGNT 161

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A QIF +M  +++ +WN L+ G++ +G   +  +   +++   ++PD+ T    L++C
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A   ++  G++++  +LK    + + +G A+I ++ KCGD+  + +VF+ +  +D ++W 
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+  A+HG  K+A + F+ M++ G ++PD+  F ++L AC+H   ++ G ++   M  
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKVHARM-K 339

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNL 673
           + G+       + +L +  + G +++A  V +   ++ R+  +W A+ +  A HG +
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL--VKGRNVVSWTAMIAGFAQHGRI 394


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/735 (31%), Positives = 405/735 (55%), Gaps = 51/735 (6%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           GN+ ++K++   +        N+ L    + G Y++A  L  Q+     +KPD  +  + 
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQM-VQDSVKPDKRTFVSM 217

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA+ RN   G +L+   L+AG                                + D+
Sbjct: 218 LNACADARNVDKGRELYNLILKAGW-------------------------------DTDL 246

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +  T  ++   K G +  A +VFD +P RDL  + +MITG   +G       LF+ M + 
Sbjct: 247 FVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEE 306

Query: 184 DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V+ D  +F S+L  C+    LE G+++H+ + + G+   + V  A+++MY  CG++ DA
Sbjct: 307 GVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDA 366

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+  KG   + +S+  M+ G A  GR++EA + F  M+ + + P+ +TF+S++ AC 
Sbjct: 367 LEVFDLVKGR--NVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACS 424

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P   + G Q+    +++G+ +   V  A ++MY+ CG + +A  +F ++ ++++V+WN 
Sbjct: 425 SPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNA 484

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           MI+ Y Q     +A+  +  +   GI+P+  TF S+L    SS  +E+ + +H  +   G
Sbjct: 485 MITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG 544

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           + +++ VSNAL+S +     +  A  +F++M  R++++WNT+I GF+ +G       +F 
Sbjct: 545 LESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFK 604

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +  S ++PD+ T +  L++CA   +L  G+++H  + +      + +G  +I++Y KCG
Sbjct: 605 MMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCG 664

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++ + +VF+ + +K+  SW ++I+ YAQHG GKEA+  F  MQ  G +KPD  TF   L
Sbjct: 665 SIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEG-VKPDWITFVGAL 723

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SAC+HAGL+++G   F SM  ++   P  +H  CM+DL GRAG L+EA   I    ++  
Sbjct: 724 SACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPD 782

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           S  W AL  AC  H N+ L    A   LE + +   V+V+LSNIYAAAG+W+E A +R++
Sbjct: 783 SRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKV 842

Query: 717 LKRTGVIKQPGCSWI 731
           +   GV+K+PG SWI
Sbjct: 843 MLDRGVVKKPGQSWI 857



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 194/701 (27%), Positives = 363/701 (51%), Gaps = 55/701 (7%)

Query: 23  KLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIY--SLSTTLAACANLRNAAFGNQLH 80
           K N  L  LS++G + +A+ +  ++ SSH     IY  + S  L  C   +N   G +++
Sbjct: 77  KANAVLNRLSKAGQFNEAMQVLERVDSSH---IQIYRQTYSALLQLCIKFKNLGDGERIY 133

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +  ++G++                               PD++   T ++   K G+  
Sbjct: 134 NHIKKSGVQ-------------------------------PDIFMRNTLINMYAKCGNTI 162

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A ++FD M ++D+  +N ++ G  ++G  +    L  +M +  V+ D  +F S+L+ C 
Sbjct: 163 SAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACA 222

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           DA  ++ GR+L++L+ K+G+   + V  ALI M+  CG++ DA KVF+       D +++
Sbjct: 223 DARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP--TRDLVTW 280

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             M+ GLA  GR ++A   F+ M    ++P ++ FVS++ AC  P     G +VHA+  +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G++    V  A ++MY+ CG +++A  +F  ++ +++VSW  MI+ +AQ      A L 
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   GI P+  TF S+L   +S   ++  + I   +   G  ++ +V  AL+S YAK
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +K A+++F  +S +N++ WN +I  ++ +      L  F  LL   ++P+  T +  
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L+ C    SL  GK +H  ++K  L S + + NA+++++  CGDL  +  +FN M ++D 
Sbjct: 521 LNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDL 580

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN +I+ + QHG+ + A   FK MQ+ G IKPD+ TFT +L+AC+    + +G R+  
Sbjct: 581 VSWNTIIAGFVQHGKNQVAFDYFKMMQESG-IKPDKITFTGLLNACASPEALTEGRRLH- 638

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +++ +  F       + ++ +  + G +++A +V + +  +    +W ++ +  A HG  
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFH-KLPKKNVYSWTSMIAGYAQHGR- 696

Query: 674 RLGRIIAGLLLEREQD--KPSVYVLLSNIYAA--AGLWEEA 710
             G+    L  + +Q+  KP     +  + A   AGL EE 
Sbjct: 697 --GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEG 735



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 223/437 (51%), Gaps = 19/437 (4%)

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
           C VF + K    D    N +++ L+  G+  EA+     +  + ++    T+ +++  C+
Sbjct: 66  CVVFADIK----DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCI 121

Query: 303 CPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             +    G +++    KSG +    + N  I MY+ CG    A  IF  ++EKD+ SWN 
Sbjct: 122 KFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNL 181

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           ++  Y Q  L   A   + +M    ++PD+ TF S+L   A +  ++    ++  +   G
Sbjct: 182 LLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             T++ V  ALI+ + K   I  A ++F N+  R+++TW ++I G   +G   Q    F 
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +    ++PD+      L +C    +L  GK++H  + +    +++ +G A++++Y KCG
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG 361

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++ +L VF+++  ++ +SW A+I+ +AQHG   EA   F  M + G I+P++ TF ++L
Sbjct: 362 SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESG-IEPNRVTFMSIL 420

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHI 653
            ACS    +  G +I D ++ + G+   +   + +L +  + G L +A RV   I+ Q++
Sbjct: 421 GACSSPSALKRGQQIQDHII-EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNV 479

Query: 654 QARSDNWWALFSACAAH 670
            A    W A+ +A   H
Sbjct: 480 VA----WNAMITAYVQH 492



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 175/357 (49%), Gaps = 43/357 (12%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-----RNLGRSAILAY 377
           T  +NA +   S  G+ +EA  +  R+    I  +    S   Q     +NLG    + Y
Sbjct: 75  TQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI-Y 133

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
             ++  G++PD F                                + N LI+ YAK    
Sbjct: 134 NHIKKSGVQPDIF--------------------------------MRNTLINMYAKCGNT 161

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A QIF +M  +++ +WN L+ G++ +G   +  +   +++   ++PD+ T    L++C
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A   ++  G++++  +LK    + + +G A+I ++ KCGD+  + +VF+ +  +D ++W 
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+  A+HG  K+A + F+ M++ G ++PD+  F ++L AC+H   ++ G ++   M  
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEG-VQPDKVAFVSLLRACNHPEALEQGKKVHARM-K 339

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNL 673
           + G+       + +L +  + G +++A  V +   ++ R+  +W A+ +  A HG +
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL--VKGRNVVSWTAMIAGFAQHGRI 394


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 248/711 (34%), Positives = 394/711 (55%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+ LS+SG  ++A+ LF Q+H+S  + P  Y  S+ L+AC  +     G QLH   L+ G
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTS-GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V N +++LY                               +++G+   A +VF+
Sbjct: 302 FSLETYVCNALVTLY-------------------------------SRLGNFIPAEQVFN 330

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  RD   YN++I+G ++ GY D  + LF++M    ++ D  + AS+LS C + G L  
Sbjct: 331 AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q HS   K+G S  + +  AL+ +Y  C ++  A + F   +    + + +NVM+   
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTE--TENVVLWNVMLVAY 448

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
             +  + E+   F  M +  + P++ T+ S++  C   R   +G Q+H Q +K+GF+   
Sbjct: 449 GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV 508

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VS+  I MY+  GK+D A  IF RL+EKD+VSW  MI+ YAQ      A+  + EMQ  
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQ 568

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GI  D   F S +++   I+ +   + IHA   ++G   ++ V NAL+S YA+  +++ A
Sbjct: 569 GIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDA 628

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           Y  F  +  ++ I+WN+LI+GF  +G   + L  FS++  +    + +T   A+S+ A +
Sbjct: 629 YFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANV 688

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++++ GKQIH  ++K    S+  + N +ITLYAKCG++D + R F  M EK+ ISWNA++
Sbjct: 689 ANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAML 748

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y+QHG G +A+S F+ M+ +G + P+  TF  VLSACSH GLVD+G + F SM   +G
Sbjct: 749 TGYSQHGHGFKALSLFEDMKQLG-VLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHG 807

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
            +P  +H +C++DLLGR+G L  A R +    IQ  +     L SAC  H N+ +G   A
Sbjct: 808 LVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAA 867

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E    + YVLLSN+YA  G W      R+++K  GV K+PG SWI
Sbjct: 868 SHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWI 918



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 188/633 (29%), Positives = 311/633 (49%), Gaps = 52/633 (8%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           K+KPD  + +  L  C    +  F    ++HA  +  G +    V N ++ LY       
Sbjct: 164 KVKPDERTYAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLY------- 215

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
                                    K G ++ A +VFD +  RD   + AM++G +++G 
Sbjct: 216 ------------------------FKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGC 251

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
           E+  + LF +MH   V    Y F+SVLS C      + G QLH LV K GFS    V NA
Sbjct: 252 EEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNA 311

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+T+Y   GN + A +VF        D +SYN ++ GL+  G  ++AL  F+ M +  L+
Sbjct: 312 LVTLYSRLGNFIPAEQVFNAMLQR--DEVSYNSLISGLSQQGYSDKALELFKKMCLDCLK 369

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P  +T  S++SAC       VG Q H+ A+K+G  +   +  A + +Y  C  I  A   
Sbjct: 370 PDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEF 429

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F   + +++V WN M+  Y   +    +   + +MQ  GI P++FT+ S+L   +S   +
Sbjct: 430 FLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV 489

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           ++ E IH  V   G   N+ VS+ LI  YAK  ++  A +IF  +  +++++W  +I G+
Sbjct: 490 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGY 549

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +    + L  F E+    +  D    + A+S+CA I +L  G+QIH     +     +
Sbjct: 550 AQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDL 609

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           S+GNA+++LYA+CG +  +   F+ +  KD ISWN+LIS +AQ G  +EA+S F  M   
Sbjct: 610 SVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKA 669

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G+ + +  TF   +SA ++   V  G +I  +M+   G     +  + ++ L  + G +D
Sbjct: 670 GQ-EINSFTFGPAVSAAANVANVKLGKQI-HAMIIKTGHDSETEVSNVLITLYAKCGNID 727

Query: 643 EAERVINSQHIQARSDN---WWALFSACAAHGN 672
           +AER    Q  +    N   W A+ +  + HG+
Sbjct: 728 DAER----QFFEMPEKNEISWNAMLTGYSQHGH 756



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 168/553 (30%), Positives = 286/553 (51%), Gaps = 29/553 (5%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G +D A  VFD+MP R L  +N ++            +GLFR M +  V+ D  ++A V
Sbjct: 116 FGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGV 175

Query: 196 LSVCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L  C  G + F    ++H+     G+   + V N LI +YF  G +  A KVF+  +   
Sbjct: 176 LRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKR- 234

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+  M+ GL+  G  EEA++ F  M  + + P+   F SV+SAC      +VG Q+
Sbjct: 235 -DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQL 293

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K GF   T V NA +T+YS  G    A  +F  + ++D VS+N++IS  +Q+   
Sbjct: 294 HGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYS 353

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  + +M    ++PD  T  SLL   +S G + + +  H++    G+ ++I +  AL
Sbjct: 354 DKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGAL 413

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K   IK A++ F +    N++ WN ++  + L     +  + F+++ M  + P++
Sbjct: 414 LDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQ 473

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C+ + ++  G+QIH  VLK      + + + +I +YAK G LD +L++F  
Sbjct: 474 FTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRR 533

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + EKD +SW A+I+ YAQH +  EA++ FK MQD G I  D   F + +SAC+    ++ 
Sbjct: 534 LKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQG-IHSDNIGFASAISACAGIQALNQ 592

Query: 608 GTRIF-DSMVNDYGFIPAEDHLS---CMLDLLGRAGYLDEA----ERVINSQHIQARSDN 659
           G +I   + V+ Y      D LS    ++ L  R G + +A    +++ +  +I     +
Sbjct: 593 GQQIHAQACVSGY-----SDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNI-----S 642

Query: 660 WWALFSACAAHGN 672
           W +L S  A  G+
Sbjct: 643 WNSLISGFAQSGH 655



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 245/508 (48%), Gaps = 17/508 (3%)

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
           GI     M +  VR ++ ++  +L  C  +G    G +LH  + K GF   V +   L+ 
Sbjct: 52  GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111

Query: 232 MYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +Y   G++  A  VF+E   +   C    +N ++    +       L  FR ML   ++P
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSC----WNKVLHRFVAGKMAGRVLGLFRRMLQEKVKP 167

Query: 290 SELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            E T+  V+  C    V +    ++HA+ +  G+E    V N  I +Y   G ++ A  +
Sbjct: 168 DERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKV 227

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F  LQ++D VSW  M+S  +Q      A+L + +M + G+ P  + F S+L++   +E  
Sbjct: 228 FDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFY 287

Query: 406 ---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
              E +H  V   G      V NAL++ Y++      A Q+F+ M  R+ +++N+LI+G 
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGL 347

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
              G+  + L+ F ++ +  L+PD  T++  LS+C+ + +L  GKQ H Y +K  + S +
Sbjct: 348 SQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDI 407

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            L  A++ LY KC D+  +   F     ++ + WN ++ AY       E+   F  MQ  
Sbjct: 408 ILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQME 467

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G I+P+Q T+ ++L  CS    VD G +I  + V   GF       S ++D+  + G LD
Sbjct: 468 G-IEPNQFTYPSILRTCSSLRAVDLGEQI-HTQVLKTGFQFNVYVSSVLIDMYAKLGKLD 525

Query: 643 EAERVINSQHIQARSDNWWALFSACAAH 670
            A ++      +    +W A+ +  A H
Sbjct: 526 HALKIFRRLK-EKDVVSWTAMIAGYAQH 552


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/581 (36%), Positives = 335/581 (57%), Gaps = 10/581 (1%)

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
           V+   I G  +NG+ +  + L+ +M +  +  D   F SV+  C +   L+ GR++H  +
Sbjct: 87  VWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDI 146

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
              GF   V V  AL +MY  CG++ +A +VF+       D +S+N ++ G +  G+  E
Sbjct: 147 IARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKR--DVVSWNAIIAGYSQNGQPYE 204

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           AL  F +M V  ++P+  T VSVM  C   L    G Q+H  A++SG E+   V N  + 
Sbjct: 205 ALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVN 264

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG ++ A  +F R+  +D+ SWN +I  Y+  +    A+  +  MQ  GI+P+  T
Sbjct: 265 MYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSIT 324

Query: 392 FGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             S+L +   +   E  + IH +   +G  +N  V NAL++ YAK   +  AY++F  M 
Sbjct: 325 MVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP 384

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            +N++ WN +I+G+  +G P + L  F E+    ++PD + +   L +CA   +L  GKQ
Sbjct: 385 KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQ 444

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           IHGY +++   S + +G  ++ +YAKCG+++ + ++F  M E+D +SW  +I AY  HG 
Sbjct: 445 IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGH 504

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G++A++ F  MQ+ G  K D   FTA+L+ACSHAGLVD G + F  M +DYG  P  +H 
Sbjct: 505 GEDALALFSKMQETG-TKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHY 563

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +C++DLLGRAG+LDEA  +I +  ++  ++ W AL  AC  H N+ LG   A  L E + 
Sbjct: 564 ACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDP 623

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           D    YVLLSNIYA A  WE+ A +R+++K  GV KQPGCS
Sbjct: 624 DNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCS 664



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 167/580 (28%), Positives = 284/580 (48%), Gaps = 58/580 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +  AL L+ Q+  +  + PD     + + AC +  +   G ++H   +  G ++  
Sbjct: 97  KNGFWNKALRLYYQMQRT-GINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFES-- 153

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                                        DV   T   S  TK G ++ A +VFD+MP R
Sbjct: 154 -----------------------------DVIVGTALASMYTKCGSLENARQVFDRMPKR 184

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLH 211
           D+  +NA+I G ++NG     + LF EM    ++ ++ +  SV+ VC   L LE G+Q+H
Sbjct: 185 DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIH 244

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               +SG    V VVN L+ MY  CGNV  A K+FE     + D  S+N ++ G +   +
Sbjct: 245 CYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMP--IRDVASWNAIIGGYSLNSQ 302

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
             EAL  F  M V  ++P+ +T VSV+ AC        G Q+H  A++SGFE+   V NA
Sbjct: 303 HHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA 362

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG ++ A  +F R+ +K++V+WN +IS Y+Q      A+  ++EMQ+ GI+PD
Sbjct: 363 LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPD 422

Query: 389 EFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            F   S+L +      +E  + IH +   +G  +N+ V   L+  YAK   +  A ++F 
Sbjct: 423 SFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFE 482

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  +++++W T+I  + ++G     L  FS++  +  + D    +  L++C+    +  
Sbjct: 483 RMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQ 542

Query: 506 GKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISA 562
           G Q +   +K++  L  K+     ++ L  + G LD +  +  NM +E D   W AL+ A
Sbjct: 543 GLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601

Query: 563 YAQH-----GEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              H     GE        +A + +  + PD A +  +LS
Sbjct: 602 CRIHCNIELGE--------QAAKHLFELDPDNAGYYVLLS 633



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 226/489 (46%), Gaps = 47/489 (9%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  +A  S++G   +AL LF ++  +  +KP+  +L + +  CA+L     G 
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVN-GIKPNSSTLVSVMPVCAHLLALEQGK 241

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+H YA+R+G+++   V N ++++Y    ++ +  ++F                      
Sbjct: 242 QIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLF---------------------- 279

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                    ++MP RD+  +NA+I G + N      +  F  M    ++ ++ +  SVL 
Sbjct: 280 ---------ERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLP 330

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C A L  LE G+Q+H    +SGF     V NAL+ MY  CGNV  A K+FE       +
Sbjct: 331 AC-AHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK--N 387

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            +++N ++ G +  G   EAL  F +M    ++P     VSV+ AC   L    G Q+H 
Sbjct: 388 VVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHG 447

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             ++SGFE+   V    + +Y+ CG ++ A  +F R+ E+D+VSW TMI  Y     G  
Sbjct: 448 YTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGED 507

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALI 428
           A+  + +MQ  G + D   F ++L +     +V+  +  F  +    G+   ++    L+
Sbjct: 508 ALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLV 567

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
               +   + +A  I  NMS   +   W  L+    ++     G Q    L   EL PD 
Sbjct: 568 DLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLF--ELDPDN 625

Query: 488 YTLSVALSS 496
               V LS+
Sbjct: 626 AGYYVLLSN 634



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 196/391 (50%), Gaps = 17/391 (4%)

Query: 342 ACMIFARLQEKDI----VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
           AC    +  + DI    V W   I  Y +      A+  Y +MQ  GI PD+  F S++ 
Sbjct: 69  ACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIK 128

Query: 398 SSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           + G    ++    +H  +   G  +++ V  AL S Y K   ++ A Q+F  M  R++++
Sbjct: 129 ACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVS 188

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN +I G+  NG P + L  FSE+ ++ ++P+  TL   +  CA + +L  GKQIH Y +
Sbjct: 189 WNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAI 248

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           ++ + S + + N ++ +YAKCG+++ + ++F  M  +D  SWNA+I  Y+ + +  EA++
Sbjct: 249 RSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALA 308

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  MQ  G IKP+  T  +VL AC+H   ++ G +I    +   GF   +   + ++++
Sbjct: 309 FFNRMQVRG-IKPNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNM 366

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KPS 692
             + G ++ A ++   +  +     W A+ S  + HG+         L +E +    KP 
Sbjct: 367 YAKCGNVNSAYKLF-ERMPKKNVVAWNAIISGYSQHGHPHEA---LALFIEMQAQGIKPD 422

Query: 693 VYVLLSNIYAAAGL--WEEAANIRELLKRTG 721
            + ++S + A A     E+   I     R+G
Sbjct: 423 SFAIVSVLPACAHFLALEQGKQIHGYTIRSG 453



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 173/405 (42%), Gaps = 58/405 (14%)

Query: 12  GNSNTSKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           GN NT+ +L  ++ I         +   S +  + +AL  F ++     +KP+  ++ + 
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR-GIKPNSITMVSV 328

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA+L     G Q+H YA+R+G ++   V N ++++Y    ++ S  ++F  +   +V
Sbjct: 329 LPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNV 388

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            +W   +S  ++ GH   A                               + LF EM   
Sbjct: 389 VAWNAIISGYSQHGHPHEA-------------------------------LALFIEMQAQ 417

Query: 184 DVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            ++ D+++  SVL  C   L LE G+Q+H    +SGF   V V   L+ +Y  CGNV  A
Sbjct: 418 GIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTA 477

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            K+FE       D +S+  M+      G  E+AL  F  M     +   + F ++++AC 
Sbjct: 478 QKLFERMPEQ--DVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACS 535

Query: 303 CPRV---GYQVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVS 356
              +   G Q + Q MKS +     + + A  + +    G +DEA  I   +  E D   
Sbjct: 536 HAGLVDQGLQ-YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANV 594

Query: 357 WNTMIST---YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           W  ++     +    LG  A     E+      PD   +  LL++
Sbjct: 595 WGALLGACRIHCNIELGEQAAKHLFELD-----PDNAGYYVLLSN 634


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/725 (32%), Positives = 390/725 (53%), Gaps = 46/725 (6%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +EL  + N+S    L+  +++G  ++AL L+ Q+H +  + P  Y LS+ L++C      
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELF 159

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           A G  +HA   + G  +   V N +++LY                               
Sbjct: 160 AQGRLIHAQGYKHGFCSEIFVGNAVITLY------------------------------- 188

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G    A  VF  MP RD   +N +I+G  + G+ +  + +F EM    +  D  + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+L+ C + G L+ G QLHS + K+G S    +  +L+ +Y  CG+V  A  +F  +   
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-- 306

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
             + + +N+M+     +  + ++   F  M  A +RP++ T+  ++  C C R   +G Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+ ++K+GFE+   VS   I MYS  G +++A  +   L+EKD+VSW +MI+ Y Q   
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + A+ A+ EMQ  GI PD     S ++    I  +     IHA ++++G   ++ + NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ YA+  RI++A+  F  +  ++ ITWN L++GF  +G   + L+ F  +  S ++ +
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T   ALS+ A ++ ++ GKQIH  V+K     +  +GNA+I+LY KCG  + +   F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E++ +SWN +I++ +QHG G EA+  F  M+  G IKP+  TF  VL+ACSH GLV+
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVE 665

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F SM ++YG  P  DH +C++D+ GRAG LD A++ I    I A +  W  L SA
Sbjct: 666 EGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ +G   A  LLE E    + YVLLSN YA    W     +R++++  GV K+P
Sbjct: 726 CKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP 785

Query: 727 GCSWI 731
           G SWI
Sbjct: 786 GRSWI 790



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 307/620 (49%), Gaps = 44/620 (7%)

Query: 60  LSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            +  L AC  N R      ++HA A+  GL  Y  V N ++ LY     ++  +RVF E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              D  SW                                AM++G  +NG  +  +GL+R
Sbjct: 104 SARDNVSWV-------------------------------AMLSGYAQNGLGEEALGLYR 132

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +MH+  V    Y  +SVLS C  A L   GR +H+   K GF   + V NA+IT+Y  CG
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCG 192

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           +   A +VF +      D +++N ++ G A  G  E AL  F +M  + L P  +T  S+
Sbjct: 193 SFRLAERVFCDMPHR--DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 298 MSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC      + G Q+H+   K+G  +   +  + + +Y  CG ++ A +IF      ++
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAF 411
           V WN M+  + Q N    +   + +MQ+ GIRP++FT+  +L +   +  I++ E IH+ 
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  +++ VS  LI  Y+K   +++A ++   +  +++++W ++I G++ +      
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+    + PD   L+ A+S CA I+++R G QIH  +  +     +S+ NA++ L
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YA+CG +  +   F  +  KD I+WN L+S +AQ G  +EA+  F  M   G +K +  T
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFT 549

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F + LSA ++   +  G +I   ++   G     +  + ++ L G+ G  ++A ++  S+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDA-KMEFSE 607

Query: 652 HIQARSDNWWALFSACAAHG 671
             +    +W  + ++C+ HG
Sbjct: 608 MSERNEVSWNTIITSCSQHG 627


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 237/725 (32%), Positives = 390/725 (53%), Gaps = 46/725 (6%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +EL  + N+S    L+  +++G  ++AL L+ Q+H +  + P  Y LS+ L++C      
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELF 159

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           A G  +HA   + G  +   V N +++LY                               
Sbjct: 160 AQGRLIHAQGYKHGFCSEIFVGNAVITLY------------------------------- 188

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G    A  VF  MP RD   +N +I+G  + G+ +  + +F EM    +  D  + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+L+ C + G L+ G QLHS + K+G S    +  +L+ +Y  CG+V  A  +F  +   
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-- 306

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
             + + +N+M+     +  + ++   F  M  A +RP++ T+  ++  C C R   +G Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+ ++K+GFE+   VS   I MYS  G +++A  +   L+EKD+VSW +MI+ Y Q   
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + A+ A+ EMQ  GI PD     S ++    I  +     IHA ++++G   ++ + NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ YA+  RI++A+  F  +  ++ ITWN L++GF  +G   + L+ F  +  S ++ +
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T   ALS+ A ++ ++ GKQIH  V+K     +  +GNA+I+LY KCG  + +   F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E++ +SWN +I++ +QHG G EA+  F  M+  G IKP+  TF  VL+ACSH GLV+
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVE 665

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F SM ++YG  P  DH +C++D+ GRAG LD A++ I    I A +  W  L SA
Sbjct: 666 EGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ +G   A  LLE E    + YVLLSN YA    W     +R++++  GV K+P
Sbjct: 726 CKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP 785

Query: 727 GCSWI 731
           G SWI
Sbjct: 786 GRSWI 790



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 307/620 (49%), Gaps = 44/620 (7%)

Query: 60  LSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            +  L AC  N R      ++HA A+  GL  Y  V N ++ LY     ++  +RVF E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              D  SW                                AM++G  +NG  +  +GL+R
Sbjct: 104 SARDNVSWV-------------------------------AMLSGYAQNGLGEEALGLYR 132

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +MH+  V    Y  +SVLS C  A L   GR +H+   K GF   + V NA+IT+Y  CG
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCG 192

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           +   A +VF +      D +++N ++ G A  G  E AL  F +M  + L P  +T  S+
Sbjct: 193 SFRLAERVFCDMPHR--DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 298 MSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC      + G Q+H+   K+G  +   +  + + +Y  CG ++ A +IF      ++
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAF 411
           V WN M+  + Q N    +   + +MQ+ GIRP++FT+  +L +   +  I++ E IH+ 
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  +++ VS  LI  Y+K   +++A ++   +  +++++W ++I G++ +      
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+    + PD   L+ A+S CA I+++R G QIH  +  +     +S+ NA++ L
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YA+CG +  +   F  +  KD I+WN L+S +AQ G  +EA+  F  M   G +K +  T
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFT 549

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F + LSA ++   +  G +I   ++   G     +  + ++ L G+ G  ++A ++  S+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDA-KMEFSE 607

Query: 652 HIQARSDNWWALFSACAAHG 671
             +    +W  + ++C+ HG
Sbjct: 608 MSERNEVSWNTIITSCSQHG 627


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/722 (34%), Positives = 383/722 (53%), Gaps = 49/722 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++   + +  L+  G  Q+A HLF+Q+       P+ Y+  + L A A+     +  ++H
Sbjct: 285 VISWTVMIGGLAHYGRGQEAFHLFLQMQRE-GFIPNSYTYVSILNANASAGALEWVKEVH 343

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++A+ AGL     V N ++ +Y                                K G +D
Sbjct: 344 SHAVNAGLALDLRVGNALVHMY-------------------------------AKSGSID 372

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL---S 197
            A  VFD M +RD+  +  MI G  ++G       LF +M +     +  ++ S+L   +
Sbjct: 373 DARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASA 432

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH- 256
           +     LE+ + +H    ++GF   + + NALI MY  CG++ DA  VF+     +CD  
Sbjct: 433 IASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDG----MCDRD 488

Query: 257 -ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS---ACLCPRVGYQVHA 312
            IS+N MM GLA  G   EA   F  M    L P   T++S+++   +        +VH 
Sbjct: 489 VISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHK 548

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+++G  +   V +A I MY  CG ID+A ++F +L  + + +WN MI   AQ+  GR 
Sbjct: 549 HAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGRE 608

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A+  +L+MQ  G  PD  TF ++L+++     +E V+ +H+     G++ +++V NAL+ 
Sbjct: 609 ALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLV-DLRVGNALVH 667

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+K   +K A Q+F +M  RN+ TW  +I G   +G       HF ++L   + PD  T
Sbjct: 668 TYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATT 727

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               LS+CA   +L   K++H + +   L+S + +GNA++ +YAKCG +D +  VF+ M+
Sbjct: 728 YVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV 787

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E+D  SW  +I   AQHG G EA+  F  M+  G  KP+  ++ AVL+ACSHAGLVD+G 
Sbjct: 788 ERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEG-FKPNGYSYVAVLTACSHAGLVDEGR 846

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R F SM  DYG  P  +H +CM+DLLGRAG L+EAE  I +  I+     W AL  AC  
Sbjct: 847 RQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVT 906

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +GNL +    A   L+ +    S YVLLSNIYAA G WE+   +R +++R G+ K+PG S
Sbjct: 907 YGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRS 966

Query: 730 WI 731
           WI
Sbjct: 967 WI 968



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 176/607 (28%), Positives = 296/607 (48%), Gaps = 62/607 (10%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           +DA+ + ++I     +  D +S    L  C    +     Q+H   +++G++   +VAN 
Sbjct: 100 KDAVAM-LKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANK 158

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L +Y     L   ++VF ++   ++Y WTT +    + GH + A  V+DKM        
Sbjct: 159 LLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQE----- 213

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTK 216
                 C +                     +  ++ S+L  C   + L++G+++H+ + +
Sbjct: 214 ------CGQP--------------------NEITYLSILKACCCPVNLKWGKKIHAHIIQ 247

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           SGF   V V  AL+ MY  CG++ DA  +F+  K    + IS+ VM+ GLA  GR +EA 
Sbjct: 248 SGFQSDVRVETALVNMYVKCGSIEDAQLIFD--KMVERNVISWTVMIGGLAHYGRGQEAF 305

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F  M      P+  T+VS+++A           +VH+ A+ +G      V NA + MY
Sbjct: 306 HLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMY 365

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           +  G ID+A ++F  + E+DI SW  MI   AQ   G+ A   +L+MQ  G  P+  T+ 
Sbjct: 366 AKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYL 425

Query: 394 SLL-----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           S+L     AS+  +E V+++H      G I+++++ NALI  YAK   I  A  +F  M 
Sbjct: 426 SILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMC 485

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            R++I+WN ++ G   NG   +    F ++    L PD  T    L++     +L    +
Sbjct: 486 DRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNE 545

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H + ++  LIS   +G+A I +Y +CG +D +  +F+ +  +   +WNA+I   AQ   
Sbjct: 546 VHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRC 605

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSA----------------CSHAGLVDDGTRIF 612
           G+EA+S F  MQ  G I PD  TF  +LSA                 + AGLVD   R+ 
Sbjct: 606 GREALSLFLQMQREGFI-PDATTFINILSANVDEEALEWVKEVHSHATDAGLVD--LRVG 662

Query: 613 DSMVNDY 619
           +++V+ Y
Sbjct: 663 NALVHTY 669



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 193/716 (26%), Positives = 338/716 (47%), Gaps = 57/716 (7%)

Query: 21  LLKLNI-----SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           LLK NI      +   +  GH +DA+ ++ ++        +I  LS  L AC    N  +
Sbjct: 179 LLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSI-LKACCCPVNLKW 237

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++HA+ +++G ++   V   ++++Y     +   + +F ++   +V SWT        
Sbjct: 238 GKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTV------- 290

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                   MI G    G       LF +M +     ++Y++ S+
Sbjct: 291 ------------------------MIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSI 326

Query: 196 LSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L+    AG LE+ +++HS    +G +  + V NAL+ MY   G++ DA  VF+       
Sbjct: 327 LNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER-- 384

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----YQ 309
           D  S+ VM+ GLA  GR +EA   F  M      P+  T++S+++A              
Sbjct: 385 DIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKV 444

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH  A ++GF +   + NA I MY+ CG ID+A ++F  + ++D++SWN M+   AQ   
Sbjct: 445 VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGC 504

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNA 426
           G  A   +L+MQ  G+ PD  T+ SLL + G    +E V  +H      G+I++ +V +A
Sbjct: 505 GHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSA 564

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
            I  Y +   I  A  +F  +S R++ TWN +I G        + L  F ++      PD
Sbjct: 565 FIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPD 624

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             T    LS+     +L   K++H +     L+  + +GNA++  Y+KCG++  + +VF+
Sbjct: 625 ATTFINILSANVDEEALEWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFD 683

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M+E++  +W  +I   AQHG G +A S F  M   G I PD  T+ ++LSAC+  G ++
Sbjct: 684 DMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREG-IVPDATTYVSILSACASTGALE 742

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
               + +  V+  G +      + ++ +  + G +D+A  V +   ++    +W  +   
Sbjct: 743 WVKEVHNHAVS-AGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGG 800

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLKRT 720
            A HG   L  +   + ++ E  KP+ Y  ++ + A   AGL +E    R+ L  T
Sbjct: 801 LAQHGR-GLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGR--RQFLSMT 853



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/548 (29%), Positives = 280/548 (51%), Gaps = 27/548 (4%)

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRR----DNYSFASVLSVC-DAGLLEFGRQLHS 212
           NA + G  E  +  I       M K+ V++    D++S+ ++L  C     +   +Q+H 
Sbjct: 83  NASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASV 269
            + KSG    + V N L+ +Y  CG +  A +VF+   +   Y+     +  M+ G A  
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYI-----WTTMIGGYAEY 197

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G  E+A+  +  M     +P+E+T++S++ AC CP   + G ++HA  ++SGF++   V 
Sbjct: 198 GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A + MY  CG I++A +IF ++ E++++SW  MI   A    G+ A   +L+MQ  G  
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P+ +T+ S+L   AS+G +E V+ +H+     G+  +++V NAL+  YAK+  I  A  +
Sbjct: 318 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 377

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL--SSCARIS 501
           F  M+ R+I +W  +I G   +G   +    F ++  +   P+  T    L  S+ A  S
Sbjct: 378 FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTS 437

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L   K +H +  +   IS + +GNA+I +YAKCG +D +  VF+ M ++D ISWNA++ 
Sbjct: 438 ALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMG 497

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
             AQ+G G EA + F  MQ  G + PD  T+ ++L+       ++    +    V + G 
Sbjct: 498 GLAQNGCGHEAFTVFLQMQQEGLV-PDSTTYLSLLNTHGSTDALEWVNEVHKHAV-ETGL 555

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
           I      S  + +  R G +D+A  + +   ++  +  W A+    A     R GR    
Sbjct: 556 ISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVT-TWNAMIGGAAQQ---RCGREALS 611

Query: 682 LLLEREQD 689
           L L+ +++
Sbjct: 612 LFLQMQRE 619



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 229/482 (47%), Gaps = 16/482 (3%)

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
           VC + S +   +   +V   ++A+   +  +   +     ++V+++  CL      +  Q
Sbjct: 80  VCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQ 139

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH   +KSG E    V+N  + +Y  CG++  A  +F +L +K+I  W TMI  YA+   
Sbjct: 140 VHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGH 199

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNA 426
              A+  Y +M+    +P+E T+ S+L +      ++  + IHA +  +G  ++++V  A
Sbjct: 200 AEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETA 259

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ Y K   I+ A  IF  M  RN+I+W  +I G    G   +    F ++      P+
Sbjct: 260 LVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPN 319

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            YT    L++ A   +L   K++H + +   L   + +GNA++ +YAK G +D +  VF+
Sbjct: 320 SYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD 379

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E+D  SW  +I   AQHG G+EA S F  MQ  G + P+  T+ ++L+A + A    
Sbjct: 380 GMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCL-PNLTTYLSILNASAIASTSA 438

Query: 607 -DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            +  ++      + GFI      + ++ +  + G +D+A  V +         +W A+  
Sbjct: 439 LEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM-CDRDVISWNAMMG 497

Query: 666 ACAAHGNLRLGRIIAGLLLEREQD----KPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
             A +G    G     + L+ +Q+      + Y+ L N + +    E    + +    TG
Sbjct: 498 GLAQNG---CGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554

Query: 722 VI 723
           +I
Sbjct: 555 LI 556


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 238/728 (32%), Positives = 389/728 (53%), Gaps = 52/728 (7%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT-----LAACANL 70
           T+   ++  N  +A L++ GH  +A   +      ++++ D  +L+ T     L AC+  
Sbjct: 290 TADRDVVVYNALIAALAQHGHNVEAFEQY------YRMRSDGVALNRTTYLSILNACSTS 343

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           +    G  +H++    G  +   + N ++S+Y    DL   +                  
Sbjct: 344 KALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR------------------ 385

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
                        E+F  MP RDL  +NA+I G          + L+++M    V+    
Sbjct: 386 -------------ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F  +LS C ++     G+ +H  + +SG      + NAL+ MY  CG++++A  VFE  
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGT 492

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
           +    D IS+N M+ G A  G  E A   F++M    L P  +TF SV+S C  P    +
Sbjct: 493 QAR--DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALEL 550

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H +  +SG +   ++ NA I MY  CG + +A  +F  LQ +D++SW  MI   A 
Sbjct: 551 GKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCAD 610

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
           +     AI  + +MQ+ G RP + TF S+L    SS  ++  + + A++  +G   +  V
Sbjct: 611 QGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGV 670

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            NALISAY+K+  +  A ++F  M  R+I++WN +I G+  NG     ++   ++   ++
Sbjct: 671 GNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P++++    L++C+  S+L  GK++H  ++K  L   + +G A+I++YAKCG    +  
Sbjct: 731 VPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQE 790

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF+ +IEK+ ++WNA+I+AYAQHG   +A+  F  M+  G IKPD +TFT++LSAC+HAG
Sbjct: 791 VFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEG-IKPDGSTFTSILSACNHAG 849

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV +G +IF SM ++YG +P  +H  C++ LLGRA    EAE +IN       +  W  L
Sbjct: 850 LVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETL 909

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             AC  HGN+ L    A   L+     P+VY+LLSN+YAAAG W++ A IR +++  G+ 
Sbjct: 910 LGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIR 969

Query: 724 KQPGCSWI 731
           K+PG SWI
Sbjct: 970 KEPGRSWI 977



 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 165/593 (27%), Positives = 301/593 (50%), Gaps = 42/593 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G  + A  LF ++ ++  + P+  +  + L AC +      G ++H+  ++AG +  
Sbjct: 104 AQQGFKKKAFQLFEEMQNAGFI-PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           P V N++LS+Y    DL   ++VF+ I                                 
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGIS-------------------------------P 191

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQL 210
           RD+  YN M+    +  Y    +GLF +M    +  D  ++ ++L +     +L+ G+++
Sbjct: 192 RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  + G +  + V  AL+TM   CG+V  A + F+       D + YN ++  LA  G
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR--DVVVYNALIAALAQHG 309

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
              EA  ++  M    +  +  T++S+++AC   +    G  +H+   + G  +   + N
Sbjct: 310 HNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGN 369

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I+MY+ CG + +A  +F  + ++D++SWN +I+ YA+R     A+  Y +MQS G++P
Sbjct: 370 ALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKP 429

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
              TF  LL   A+S      +MIH  +  +GI +N  ++NAL++ Y +   + +A  +F
Sbjct: 430 GRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVF 489

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                R++I+WN++I G   +G      + F E+   EL PD  T +  LS C    +L 
Sbjct: 490 EGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALE 549

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GKQIHG + ++ L   ++LGNA+I +Y +CG L  +  VF+ +  +D +SW A+I   A
Sbjct: 550 LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA 609

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
             GE  +A+  F  MQ+ G  +P ++TF+++L  C+ +  +D+G ++   ++N
Sbjct: 610 DQGEDMKAIELFWQMQNEG-FRPVKSTFSSILKVCTSSACLDEGKKVIAYILN 661



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 172/636 (27%), Positives = 313/636 (49%), Gaps = 48/636 (7%)

Query: 47  IHSSHKLKPDIYSLSTTLA---ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK 103
           + ++H+ +P     +T +A    C   R      ++HA  + A +     ++N ++++Y 
Sbjct: 14  VSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYV 73

Query: 104 NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
             R ++   +VF E+   DV SW + +S         YA                     
Sbjct: 74  KCRSVLDAHQVFKEMPRRDVISWNSLISC--------YA--------------------- 104

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL 222
             + G++     LF EM       +  ++ S+L+ C     LE G+++HS + K+G+   
Sbjct: 105 --QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
             V N+L++MY  CG++  A +VF  A     D +SYN M+   A    V+E L  F  M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220

Query: 283 LVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
               + P ++T+++++ A   P +   G ++H   ++ G  +   V  A +TM   CG +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL--- 396
           D A   F    ++D+V +N +I+  AQ      A   Y  M+S G+  +  T+ S+L   
Sbjct: 281 DSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           ++S  +E  ++IH+ +  +G  +++Q+ NALIS YA+   + +A ++F+ M  R++I+WN
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G+       + ++ + ++    ++P   T    LS+CA  S+   GK IH  +L++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            + S   L NA++ +Y +CG L  +  VF     +D ISWN++I+ +AQHG  + A   F
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + MQ+   ++PD  TF +VLS C +   ++ G +I    + + G     +  + ++++  
Sbjct: 521 QEMQNE-ELEPDNITFASVLSGCKNPEALELGKQIH-GRITESGLQLDVNLGNALINMYI 578

Query: 637 RAGYLDEAERVINS-QHIQARSDNWWALFSACAAHG 671
           R G L +A  V +S QH    S  W A+   CA  G
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMS--WTAMIGGCADQG 612



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 238/480 (49%), Gaps = 46/480 (9%)

Query: 288 RPSEL---TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           RP+E    T+V+++  C   R+     ++HAQ +++       +SN  I MY  C  + +
Sbjct: 21  RPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLD 80

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---S 398
           A  +F  +  +D++SWN++IS YAQ+   + A   + EMQ+ G  P++ T+ S+L    S
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
              +E  + IH+ +   G   + +V N+L+S Y K   + +A Q+F  +SPR+++++NT+
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           +  +    +  + L  F ++    + PD+ T    L +    S L  GK+IH   ++  L
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S + +G A++T+  +CGD+D + + F    ++D + +NALI+A AQHG   EA   +  
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 579 MQDVGRIKPDQATFTAVLSACS-----------HAGLVDDG----TRIFDSMVNDYG--- 620
           M+  G +  ++ T+ ++L+ACS           H+ + +DG     +I +++++ Y    
Sbjct: 321 MRSDG-VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 621 ----------FIPAEDHLSCMLDLLGRAGYLDEAE-----RVINSQHIQARSDNWWALFS 665
                      +P  D +S    + G A   D  E     + + S+ ++     +  L S
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           ACA       G++I   +L R   K + ++   L N+Y   G   EA N+ E  +   VI
Sbjct: 440 ACANSSAYADGKMIHEDIL-RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 235/714 (32%), Positives = 381/714 (53%), Gaps = 42/714 (5%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N  +A L++ GHY++A   + Q+ S   +      LS  L AC+  +    G  +H++  
Sbjct: 354  NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSV-LNACSTSKALGAGELIHSHIS 412

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              G  +   + N+++S+Y    DL   +                               E
Sbjct: 413  EVGHSSDVQIGNSLISMYARCGDLPRAR-------------------------------E 441

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
            +F+ MP RDL  +NA+I G          + L+++M    V+    +F  +LS C ++  
Sbjct: 442  LFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSA 501

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               G+ +H  + +SG      + NAL+ MY  CG++++A  VFE  +    D IS+N M+
Sbjct: 502  YSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR--DIISWNSMI 559

Query: 264  DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
             G A  G  E A   F +M    L P ++TF SV+  C  P    +G Q+H   ++SG +
Sbjct: 560  AGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQ 619

Query: 321  AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               ++ NA I MY  CG + +A  +F  L+ ++++SW  MI  +A +   R A   + +M
Sbjct: 620  LDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQM 679

Query: 381  QSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
            Q+ G +P + TF S+L    SS  ++  + + A +  +G   +  V NALISAY+K+  +
Sbjct: 680  QNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSM 739

Query: 438  KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
              A ++F  M  R+I++WN +I G+  NG     LQ   ++    +  ++++    L++C
Sbjct: 740  TDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNAC 799

Query: 498  ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            +  S+L  GK++H  ++K  +   + +G A+I++YAKCG L+ +  VF+   EK+ ++WN
Sbjct: 800  SSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWN 859

Query: 558  ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            A+I+AYAQHG   +A+  F  M   G IKPD +TFT++LSAC+H+GLV +G RIF S+ +
Sbjct: 860  AMINAYAQHGLASKALDFFNCMDKEG-IKPDGSTFTSILSACNHSGLVMEGNRIFSSLES 918

Query: 618  DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
             +G  P  +H  C++ LLGRAG   EAE +IN       +  W  L  AC  HGN+ L  
Sbjct: 919  QHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAE 978

Query: 678  IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              A   L+     P+VYVLLSN+YAAAG W++ A IR +++  G+ K+PG SWI
Sbjct: 979  HAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 1032



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 174/626 (27%), Positives = 316/626 (50%), Gaps = 45/626 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G  + A  LF ++ ++  +   I  +S  L AC +     +G ++H+  + AG +  
Sbjct: 159 AQQGFKKKAFQLFEEMQTAGFIPSKITYISI-LTACCSPAELEYGKKIHSKIIEAGYQRD 217

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           P V N++L++Y    DL S ++VFS I   DV S+ T L                     
Sbjct: 218 PRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLG-------------------- 257

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQL 210
             L    A +  C         IGLF +M    +  D  ++ ++L +     +L+ G+++
Sbjct: 258 --LYAQKAYVEEC---------IGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRI 306

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L    G +  + V  AL TM+  CG+V  A +  E       D + YN ++  LA  G
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR--DVVVYNALIAALAQHG 364

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
             EEA  ++  M    +  +  T++SV++AC   +    G  +H+   + G  +   + N
Sbjct: 365 HYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGN 424

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + I+MY+ CG +  A  +F  + ++D++SWN +I+ YA+R     A+  Y +MQS G++P
Sbjct: 425 SLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKP 484

Query: 388 DEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
              TF  LL+    SS + +  +MIH  +  +GI +N  ++NAL++ Y +   I +A  +
Sbjct: 485 GRVTFLHLLSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F     R+II+WN++I G   +G      + F E+    L PD+ T +  L  C    +L
Sbjct: 544 FEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEAL 603

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+QIH  ++++ L   ++LGNA+I +Y +CG L  +  VF+ +  ++ +SW A+I  +
Sbjct: 604 ELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGF 663

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A  GE ++A   F  MQ+ G  KP ++TF+++L AC  +  +D+G ++   ++N  G+  
Sbjct: 664 ADQGEDRKAFELFWQMQNDG-FKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYEL 721

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVIN 649
                + ++    ++G + +A +V +
Sbjct: 722 DTGVGNALISAYSKSGSMTDARKVFD 747



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 161/616 (26%), Positives = 298/616 (48%), Gaps = 45/616 (7%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C   R+ A   ++HA  + AG+     ++N ++++Y   R +    +VF ++   DV SW
Sbjct: 92  CTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISW 151

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
            + +S         YA                       + G++     LF EM      
Sbjct: 152 NSLISC--------YA-----------------------QQGFKKKAFQLFEEMQTAGFI 180

Query: 187 RDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
               ++ S+L+  C    LE+G+++HS + ++G+     V N+L+ MY  C ++  A +V
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F     Y  D +SYN M+   A    VEE +  F  M    + P ++T+++++ A   P 
Sbjct: 241 FSGI--YRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS 298

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           +   G ++H  A+  G  +   V  A  TM+  CG +  A        ++D+V +N +I+
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
             AQ      A   Y +M+S G+  +  T+ S+L   ++S  +   E+IH+ +   G  +
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSS 418

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++Q+ N+LIS YA+   + +A ++F+ M  R++I+WN +I G+       + ++ + ++ 
Sbjct: 419 DVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQ 478

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              ++P   T    LS+C   S+   GK IH  +L++ + S   L NA++ +Y +CG + 
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIM 538

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  VF     +D ISWN++I+ +AQHG  + A   F  M+  G ++PD+ TF +VL  C
Sbjct: 539 EAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEG-LEPDKITFASVLVGC 597

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS-QHIQARSD 658
            +   ++ G +I   ++ + G     +  + ++++  R G L +A  V +S +H    S 
Sbjct: 598 KNPEALELGRQIH-MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMS- 655

Query: 659 NWWALFSACAAHGNLR 674
            W A+    A  G  R
Sbjct: 656 -WTAMIGGFADQGEDR 670



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 5/169 (2%)

Query: 484 RPDEYTLSV---ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           RP E   +     + +C R  SL   K+IH  +++  +   + L N +I +Y KC  +  
Sbjct: 76  RPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSD 135

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + +VF  M  +D ISWN+LIS YAQ G  K+A   F+ MQ  G I P + T+ ++L+AC 
Sbjct: 136 AHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI-PSKITYISILTACC 194

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
               ++ G +I   ++ + G+       + +L++ G+   L  A +V +
Sbjct: 195 SPAELEYGKKIHSKII-EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFS 242


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 237/725 (32%), Positives = 389/725 (53%), Gaps = 46/725 (6%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +EL  + N+S    L+  +++G  ++AL L+ Q+H +  + P  Y LS+ L++C      
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRA-GVVPTPYVLSSVLSSCTKAELF 159

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           A G  +HA   + G  +   V N +++LY                               
Sbjct: 160 AQGRLIHAQGYKHGFCSEIFVGNAVITLY------------------------------- 188

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G    A  VF  MP RD   +N +I+G  + G+ +  + +F EM    +  D  + +
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+L+ C + G L+ G QLHS + K+G S    +  +L+ +Y  CG+V  A  +F  +   
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-- 306

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
             + + +N+M+     +  + ++   F  M  A +RP++ T+  ++  C C R   +G Q
Sbjct: 307 RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQ 366

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+ ++K+GFE+   VS   I MYS  G +++A  +   L+EKD+VSW +MI+ Y Q   
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEC 426

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + A+ A+ EMQ  GI PD     S ++    I  +     IHA ++++G   ++ + NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ YA+  RI++A+  F  M  ++ IT N L++GF  +G   + L+ F  +  S ++ +
Sbjct: 487 LVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T   ALS+ A ++ ++ GKQIH  V+K     +  +GNA+I+LY KCG  + +   F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E++ +SWN +I++ +QHG G EA+  F  M+  G IKP+  TF  VL+ACSH GLV+
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEG-IKPNDVTFIGVLAACSHVGLVE 665

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F SM ++YG  P  DH +C++D+ GRAG LD A++ I    I A +  W  L SA
Sbjct: 666 EGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSA 725

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ +G   A  LLE E    + YVLLSN YA    W     +R++++  GV K+P
Sbjct: 726 CKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEP 785

Query: 727 GCSWI 731
           G SWI
Sbjct: 786 GRSWI 790



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 173/620 (27%), Positives = 306/620 (49%), Gaps = 44/620 (7%)

Query: 60  LSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            +  L AC  N R      ++HA A+  GL  Y  V N ++ LY     ++  +RVF E+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEEL 103

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              D  SW                                AM++G  +NG  +  +GL+R
Sbjct: 104 SARDNVSWV-------------------------------AMLSGYAQNGLGEEALGLYR 132

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +MH+  V    Y  +SVLS C  A L   GR +H+   K GF   + V NA+IT+Y  CG
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCG 192

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           +   A +VF +      D +++N ++ G A  G  E AL  F +M  + L P  +T  S+
Sbjct: 193 SFRLAERVFCDMPHR--DTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSL 250

Query: 298 MSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC      + G Q+H+   K+G  +   +  + + +Y  CG ++ A +IF      ++
Sbjct: 251 LAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNV 310

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAF 411
           V WN M+  + Q N    +   + +MQ+ GIRP++FT+  +L +   +  I++ E IH+ 
Sbjct: 311 VLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSL 370

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  +++ VS  LI  Y+K   +++A ++   +  +++++W ++I G++ +      
Sbjct: 371 SVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDA 430

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+    + PD   L+ A+S CA I+++R G QIH  +  +     +S+ NA++ L
Sbjct: 431 LAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNL 490

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YA+CG +  +   F  M  KD I+ N L+S +AQ G  +EA+  F  M   G +K +  T
Sbjct: 491 YARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFT 549

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F + LSA ++   +  G +I   ++   G     +  + ++ L G+ G  ++A ++  S+
Sbjct: 550 FVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDA-KMEFSE 607

Query: 652 HIQARSDNWWALFSACAAHG 671
             +    +W  + ++C+ HG
Sbjct: 608 MSERNEVSWNTIITSCSQHG 627


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 244/722 (33%), Positives = 384/722 (53%), Gaps = 49/722 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++   + +  L+  G  Q+A H F+Q+       P+ Y+  + L A A+     +  ++H
Sbjct: 96  VISWTVMIGGLAHYGRGQEAFHRFLQMQRE-GFIPNSYTYVSILNANASAGALEWVKEVH 154

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++A+ AGL     V N ++ +Y                                K G +D
Sbjct: 155 SHAVNAGLALDLRVGNALVHMY-------------------------------AKSGSID 183

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL---S 197
            A  VFD M +RD+  +  MI G  ++G       LF +M +     +  ++ S+L   +
Sbjct: 184 DARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASA 243

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH- 256
           +   G LE+ +++H    K+GF   + V NALI MY  CG++ DA  VF+     +CD  
Sbjct: 244 ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDG----MCDRD 299

Query: 257 -ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG---YQVHA 312
            IS+N M+ GLA  G   EA   F  M      P   T++S+++  +         +VH 
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A++ G  +   V +A + MY  CG ID+A +IF +L  +++ +WN MI   AQ+  GR 
Sbjct: 360 HAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGRE 419

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A+  +L+M+  G  PD  TF ++L+++     +E V+ +H++    G++ +++V NAL+ 
Sbjct: 420 ALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLV-DLRVGNALVH 478

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK      A Q+F +M  RN+ TW  +I+G   +G   +    F ++L   + PD  T
Sbjct: 479 MYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               LS+CA   +L   K++H + +   L+S + +GNA++ +YAKCG +D + RVF+ M+
Sbjct: 539 YVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML 598

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E+D  SW  +I   AQHG G +A+  F  M+  G  KP+  +F AVLSACSHAGLVD+G 
Sbjct: 599 ERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEG-FKPNGYSFVAVLSACSHAGLVDEGR 657

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R F S+  DYG  P  +H +CM+DLLGRAG L+EA+  I +  I+     W AL  AC  
Sbjct: 658 RQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVT 717

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +GNL +    A   L+ +    S YVLLSNIYAA G WE+   +R +++R G+ K+PG S
Sbjct: 718 YGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRS 777

Query: 730 WI 731
           WI
Sbjct: 778 WI 779



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 202/705 (28%), Positives = 344/705 (48%), Gaps = 54/705 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   +  G+ +DA+ ++ Q+        +I  LS  L AC +  +  +G ++HA+ +++G
Sbjct: 2   IGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSI-LKACCSPVSLKWGKKIHAHIIQSG 60

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V   ++++Y                                K G +D A  +FD
Sbjct: 61  FQSDVRVETALVNMY-------------------------------VKCGSIDDAQLIFD 89

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
           KM +R++  +  MI G    G        F +M +     ++Y++ S+L+    AG LE+
Sbjct: 90  KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV-CDHISYNVMMDG 265
            +++HS    +G +  + V NAL+ MY   G++ DA  VF+   G V  D  S+ VM+ G
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFD---GMVERDIFSWTVMIGG 206

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----YQVHAQAMKSGFE 320
           LA  GR +EA   F  M      P+  T++S+++A      G      +VH  A K+GF 
Sbjct: 207 LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFI 266

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V NA I MY+ CG ID+A ++F  + ++D++SWN MI   AQ   G  A   +L+M
Sbjct: 267 SDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKM 326

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G  PD  T+ SLL    S+G  E V+ +H      G++++++V +A +  Y +   I
Sbjct: 327 QQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSI 386

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  IF  ++ RN+ TWN +I G        + L  F ++      PD  T    LS+ 
Sbjct: 387 DDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSAN 446

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
               +L   K++H Y +   L+  + +GNA++ +YAKCG+   + +VF+ M+E++  +W 
Sbjct: 447 VGEEALEWVKEVHSYAIDAGLVD-LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWT 505

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +IS  AQHG G EA S F  M   G I PD  T+ ++LSAC+  G ++    +    VN
Sbjct: 506 VMISGLAQHGCGHEAFSLFLQMLREG-IVPDATTYVSILSACASTGALEWVKEVHSHAVN 564

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
             G +      + ++ +  + G +D+A RV +   ++    +W  +    A HG   L  
Sbjct: 565 A-GLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHGR-GLDA 621

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLKRT 720
           +   + ++ E  KP+ Y  ++ + A   AGL +E    R+ L  T
Sbjct: 622 LDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGR--RQFLSLT 664



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/537 (29%), Positives = 267/537 (49%), Gaps = 47/537 (8%)

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSG 218
           MI G  E GY +  + ++ +M +   + +  ++ S+L  C + + L++G+++H+ + +SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   V V  AL+ MY  CG++ DA  +F+  K    + IS+ VM+ GLA  GR +EA  R
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFD--KMVERNVISWTVMIGGLAHYGRGQEAFHR 118

Query: 279 FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F  M      P+  T+VS+++A           +VH+ A+ +G      V NA + MY+ 
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
            G ID+A ++F  + E+DI SW  MI   AQ   G+ A   +L+M+  G  P+  T+ S+
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 396 L-----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           L      S+G +E V+ +H      G I++++V NALI  YAK   I  A  +F  M  R
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           ++I+WN +I G   NG   +    F ++      PD  T    L++     +    K++H
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
            + ++  L+S + +G+A + +Y +CG +D +  +F+ +  ++  +WNA+I   AQ   G+
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSA----------------CSHAGLVDDGTRIFDS 614
           EA+S F  M+  G   PD  TF  +LSA                   AGLVD   R+ ++
Sbjct: 419 EALSLFLQMRREGFF-PDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVD--LRVGNA 475

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +V+ Y          C   +  +  + D  ER + +         W  + S  A HG
Sbjct: 476 LVHMYA--------KCGNTMYAKQVFDDMVERNVTT---------WTVMISGLAQHG 515



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 237/459 (51%), Gaps = 18/459 (3%)

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           M+ G A  G  E+A+  +  M     +P+E+T++S++ AC  P   + G ++HA  ++SG
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F++   V  A + MY  CG ID+A +IF ++ E++++SW  MI   A    G+ A   +L
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +MQ  G  P+ +T+ S+L   AS+G +E V+ +H+     G+  +++V NAL+  YAK+ 
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A  +F  M  R+I +W  +I G   +G   +    F ++      P+  T    L+
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 496 SCARISS--LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           + A  S+  L   K++H +  K   IS + +GNA+I +YAKCG +D +  VF+ M ++D 
Sbjct: 241 ASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDV 300

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           ISWNA+I   AQ+G G EA + F  MQ  G + PD  T+ ++L+     G  +    +  
Sbjct: 301 ISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFV-PDSTTYLSLLNTHVSTGAWEWVKEVHK 359

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
             V + G +      S  + +  R G +D+A+ + +   ++  +  W A+    A     
Sbjct: 360 HAV-EVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVT-TWNAMIGGVAQQ--- 414

Query: 674 RLGRIIAGLLLE--REQDKPSVYVLLSNIYAAAGLWEEA 710
           + GR    L L+  RE   P     ++ + A  G  EEA
Sbjct: 415 KCGREALSLFLQMRREGFFPDATTFVNILSANVG--EEA 451



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 178/373 (47%), Gaps = 15/373 (4%)

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFING 416
           MI  YA+      A+  Y +M+  G +P+E T+ S+L    S   ++  + IHA +  +G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++++V  AL++ Y K   I  A  IF  M  RN+I+W  +I G    G   +    F 
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++      P+ YT    L++ A   +L   K++H + +   L   + +GNA++ +YAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +D +  VF+ M+E+D  SW  +I   AQHG G+EA S F  M+  G + P+  T+ ++L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCL-PNLTTYLSIL 239

Query: 597 --SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
             SA +  G + +  +         GFI      + ++ +  + G +D+A R++      
Sbjct: 240 NASAITSTGAL-EWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDA-RLVFDGMCD 297

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD----KPSVYVLLSNIYAAAGLWEEA 710
               +W A+    A +G    G     + L+ +Q+      + Y+ L N + + G WE  
Sbjct: 298 RDVISWNAMIGGLAQNG---CGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWV 354

Query: 711 ANIRELLKRTGVI 723
             + +     G++
Sbjct: 355 KEVHKHAVEVGLV 367


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/686 (33%), Positives = 385/686 (56%), Gaps = 44/686 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D   L + L  C + +    G  +H   +  GL+    +  ++++LY +     S K VF
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             I+NP                               D+ ++N ++  CT+N     G+ 
Sbjct: 62  QTIENP------------------------------LDITLWNGLMAACTKNFIFIEGLE 91

Query: 176 LF-REMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           +F R +H   ++ D +++ SVL  C   G + +G+ +H+ V KSGF+  V V+++ + MY
Sbjct: 92  VFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMY 151

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C    DA K+F+E      D  S+N ++      G+ E+AL  F +M V+  +P  +T
Sbjct: 152 AKCNVFEDAIKLFDEMPER--DVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVT 209

Query: 294 FVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             +V+S+C   L    G ++H + ++SGF     VS+A + MY  CG ++ A  +F ++Q
Sbjct: 210 LTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQ 269

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
            K++VSWN+MI+ Y+ +   +S I  +  M   GIRP   T  S+L   + S  +++ + 
Sbjct: 270 RKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKF 329

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH ++  N +  +I V+++LI  Y K   I  A  +F NM   N+++WN +I+G++  G 
Sbjct: 330 IHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGS 389

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGN 526
            ++ L  F+++  + ++PD  T +  L +C++++ L  GK+IH +++++ L I+++ +G 
Sbjct: 390 YLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG- 448

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCG +D +L +FN + E+D +SW ++I+AY  HG+  EA+  F+ MQ     K
Sbjct: 449 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQ-SDAK 507

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD+ TF A+LSACSHAGLVD+G   F+ M+ +YGF PA +H SC++DLLGR G L EA  
Sbjct: 508 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 567

Query: 647 VIN-SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           ++  +  I+        LFSAC  H  L LG  I  LL+E++ D PS Y++LSN+YA+  
Sbjct: 568 ILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 627

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E   +R  +K  G+ K PGCSWI
Sbjct: 628 KWDEVRKVRLKIKELGLKKNPGCSWI 653



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 278/591 (47%), Gaps = 73/591 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +++  + + L +F ++     LKPD ++  + L AC+ L    +G  +H + +++G
Sbjct: 77  MAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V ++ + +Y           VF +                        A ++FD
Sbjct: 137 FAMDVVVMSSAVGMYAKCN-------VFED------------------------AIKLFD 165

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
           +MP+RD+  +N +I+   ++G  +  + LF EM     + D+ +  +V+S C   L LE 
Sbjct: 166 EMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 225

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+++H  + +SGF+    V +AL+ MY  CG +  A +VFE+ +    + +S+N M+ G 
Sbjct: 226 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGY 283

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  G  +  +  FR M    +RP+  T  S++ AC   +  ++G  +H   +++  EA  
Sbjct: 284 SLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI 343

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+++ I +Y  CG I  A  +F  + + ++VSWN MIS Y +      A++ + +M+  
Sbjct: 344 FVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA 403

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G++PD  TF S+L +   + ++E    IH F+  + +  N  V  AL+  YAK   + +A
Sbjct: 404 GVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 463

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF+ +  R+ ++W ++I  +  +G   + L+ F ++  S+ +PD+ T    LS+C+  
Sbjct: 464 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 523

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             +  G     Y             N MI  Y            F   +E     ++ LI
Sbjct: 524 GLVDEG----CYYF-----------NQMIAEYG-----------FKPAVEH----YSCLI 553

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
               + G  +EA   ++ +Q    I+ D    + + SAC     +D G +I
Sbjct: 554 DLLGRVGRLREA---YEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQI 601


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/713 (34%), Positives = 387/713 (54%), Gaps = 46/713 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++G  ++A+ LF  +H+S ++ P  Y LS+ L+A   ++    G QLH   ++ G
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHAS-EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N +++LY  +R L+S +R+FS                               
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFS------------------------------- 320

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            M  RD   YN++I+G  + G+ D  + LF +M +  ++ D  + AS+LS C   G L  
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAKGYVCDHISYNVMMD 264
           G QLHS   K+G S  + +  +L+ +Y  C +V  A K F   E +  V     +NVM+ 
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVL----WNVMLV 436

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
               +  + ++   FR M +  + P++ T+ S++  C       +G Q+H   +K+GF+ 
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +  I MY+  G++  A  I  RL E D+VSW  MI+ Y Q ++   A+  + EM+
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556

Query: 382 SVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             GI+ D   F S +++   I  +   + IHA  +  G   ++ ++NALIS YA+  RI+
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +AY  F  +  +N I+WN+L++G   +G+  + LQ F  +L +E   + +T   A+S+ A
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +++++ G+QIH  VLK    S+  + N++I+LYAK G +  + R FN M E++ ISWNA
Sbjct: 677 SLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNA 736

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I+ Y+QHG G EA+  F+ M+  G I P+  TF  VLSACSH GLV +G   F+SM   
Sbjct: 737 MITGYSQHGCGMEALRLFEEMKVCG-IMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI 795

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +  +P  +H  C++DLLGRAG LD A   I    I A +  W  L SAC  H N+ +G  
Sbjct: 796 HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  LLE E +  + YVL+SNIYA +  W      R+L+K  GV K+PG SWI
Sbjct: 856 AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWI 908



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/628 (28%), Positives = 305/628 (48%), Gaps = 46/628 (7%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           + P+ Y+ +  L AC    + AF    Q+H+     G  + P VAN ++ LY        
Sbjct: 155 ITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY-------- 205

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                  +K G+++ A +VF+ +  +D+  + AMI+G ++NG E
Sbjct: 206 -----------------------SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  I LF +MH  ++    Y  +SVLS      L E G QLH LV K GF     V N L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + +Y     ++ A ++F        D +SYN ++ GL   G  + AL  F  M    L+P
Sbjct: 303 VALYSRSRKLISAERIFSTMNSR--DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 290 SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
             +T  S++SAC        G Q+H+ A+K+G  A   +  + + +YS C  ++ A   F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
              + ++IV WN M+  Y Q +    +   + +MQ  G+ P++FT+ S+L    S G + 
Sbjct: 421 LXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           + E IH  V   G   N+ V + LI  YAK  ++  A +I   +   ++++W  +I G++
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            +    + LQ F E+    ++ D    + A+S+CA I +LR G+QIH         + +S
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + NA+I+LYA+CG +  +   F  + +K+ ISWN+L+S  AQ G  +EA+  F  M    
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT- 659

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             + +  T+ + +SA +    +  G +I  SMV   G+    +  + ++ L  ++G + +
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISD 718

Query: 644 AERVINSQHIQARSDNWWALFSACAAHG 671
           A R  N    +    +W A+ +  + HG
Sbjct: 719 AWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 251/483 (51%), Gaps = 12/483 (2%)

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           I L   M +  VR +  ++  +L  C  +G L    +LH  ++KSGF     ++++L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           YF  G+   A KVF+E         S+N M+    +     +    FR ML   + P+  
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSV--FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 293 TFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           TF  V+ AC+   + +    QVH++    GF++   V+N  I +YS  G I+ A  +F  
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
           +  KDIV+W  MIS  +Q  L   AIL + +M +  I P  +   S+L++S  I++ E+ 
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 408 --IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H  V   G  +   V N L++ Y+++ ++  A +IF  M+ R+ +++N+LI+G +  
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           GF  + L+ F+++    L+PD  T++  LS+CA + +L  G Q+H + +K  + + + L 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            +++ LY+KC D++ + + F     ++ + WN ++ AY Q     ++   F+ MQ  G I
Sbjct: 401 GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            P+Q T+ ++L  C+  G +  G +I   ++   GF       S ++D+  + G L  A 
Sbjct: 461 -PNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALAL 518

Query: 646 RVI 648
           R++
Sbjct: 519 RIL 521



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 167/608 (27%), Positives = 280/608 (46%), Gaps = 56/608 (9%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +LH    ++G    P + ++++  Y    D     +VF E  N  V+SW        KM 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSW-------NKMI 131

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           HV  A          +  V+      C           LFR M    +  + Y+FA VL 
Sbjct: 132 HVFVA-------QKSNFQVF------C-----------LFRRMLAEGITPNGYTFAGVLK 167

Query: 198 VCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC- 254
            C  G + F   +Q+HS     GF     V N LI +Y   G +  A KVF      +C 
Sbjct: 168 ACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF----NCICM 223

Query: 255 -DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D +++  M+ GL+  G  EEA++ F DM  + + P+     SV+SA    +   +G Q+
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K GF + T V N  + +YS   K+  A  IF+ +  +D VS+N++IS   Q+   
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  + +MQ   ++PD  T  SLL   AS G +     +H+     G+  +I +  +L
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+K   ++ A++ F      NI+ WN ++  +          + F ++ M  + P++
Sbjct: 404 LDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C  + +L  G+QIH +V+K      + + + +I +YAK G L  +LR+   
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + E D +SW A+I+ Y QH    EA+  F+ M+  G I+ D   F + +SAC+    +  
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG-IQFDNIGFASAISACAGIRALRQ 582

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA----ERVINSQHIQARSDNWWAL 663
           G +I  +     GF       + ++ L  R G + EA    E++ +  +I     +W +L
Sbjct: 583 GQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI-----SWNSL 636

Query: 664 FSACAAHG 671
            S  A  G
Sbjct: 637 VSGLAQSG 644



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 41/214 (19%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  ++ L++SG++++AL +FV++  + + + ++++  + ++A A+L N   G Q+H+
Sbjct: 631 ISWNSLVSGLAQSGYFEEALQVFVRMLRT-EAEVNMFTYGSAISAAASLANIKQGQQIHS 689

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
             L+ G  +   V+N+++SLY  +  +    R F+++   +V SW               
Sbjct: 690 MVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISW--------------- 734

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD- 200
                           NAMITG +++G     + LF EM    +  ++ +F  VLS C  
Sbjct: 735 ----------------NAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSH 778

Query: 201 AGLLEFGR-------QLHSLVTKSG-FSCLVSVV 226
            GL++ G        ++H LV KS  + C+V ++
Sbjct: 779 IGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLL 812


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 244/713 (34%), Positives = 387/713 (54%), Gaps = 46/713 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++G  ++A+ LF  +H+S ++ P  Y LS+ L+A   ++    G QLH   ++ G
Sbjct: 233 ISGLSQNGLEEEAILLFCDMHAS-EIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWG 291

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N +++LY  +R L+S +R+FS                               
Sbjct: 292 FHSETYVCNGLVALYSRSRKLISAERIFS------------------------------- 320

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            M  RD   YN++I+G  + G+ D  + LF +M +  ++ D  + AS+LS C   G L  
Sbjct: 321 TMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHK 380

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAKGYVCDHISYNVMMD 264
           G QLHS   K+G S  + +  +L+ +Y  C +V  A K F   E +  V     +NVM+ 
Sbjct: 381 GMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVL----WNVMLV 436

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
               +  + ++   FR M +  + P++ T+ S++  C       +G Q+H   +K+GF+ 
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +  I MY+  G++  A  I  RL E D+VSW  MI+ Y Q ++   A+  + EM+
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556

Query: 382 SVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             GI+ D   F S +++   I  +   + IHA  +  G   ++ ++NALIS YA+  RI+
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +AY  F  +  +N I+WN+L++G   +G+  + LQ F  +L +E   + +T   A+S+ A
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +++++ G+QIH  VLK    S+  + N++I+LYAK G +  + R FN M E++ ISWNA
Sbjct: 677 SLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNA 736

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I+ Y+QHG G EA+  F+ M+  G I P+  TF  VLSACSH GLV +G   F+SM   
Sbjct: 737 MITGYSQHGCGMEALRLFEEMKVCG-IMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKI 795

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +  +P  +H  C++DLLGRAG LD A   I    I A +  W  L SAC  H N+ +G  
Sbjct: 796 HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  LLE E +  + YVL+SNIYA +  W      R+L+K  GV K+PG SWI
Sbjct: 856 AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWI 908



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/628 (28%), Positives = 305/628 (48%), Gaps = 46/628 (7%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           + P+ Y+ +  L AC    + AF    Q+H+     G  + P VAN ++ LY        
Sbjct: 155 ITPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLY-------- 205

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                  +K G+++ A +VF+ +  +D+  + AMI+G ++NG E
Sbjct: 206 -----------------------SKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLE 242

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  I LF +MH  ++    Y  +SVLS      L E G QLH LV K GF     V N L
Sbjct: 243 EEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGL 302

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + +Y     ++ A ++F        D +SYN ++ GL   G  + AL  F  M    L+P
Sbjct: 303 VALYSRSRKLISAERIFSTMNSR--DGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKP 360

Query: 290 SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
             +T  S++SAC        G Q+H+ A+K+G  A   +  + + +YS C  ++ A   F
Sbjct: 361 DCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF 420

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
              + ++IV WN M+  Y Q +    +   + +MQ  G+ P++FT+ S+L    S G + 
Sbjct: 421 LTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY 480

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           + E IH  V   G   N+ V + LI  YAK  ++  A +I   +   ++++W  +I G++
Sbjct: 481 LGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYV 540

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            +    + LQ F E+    ++ D    + A+S+CA I +LR G+QIH         + +S
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + NA+I+LYA+CG +  +   F  + +K+ ISWN+L+S  AQ G  +EA+  F  M    
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRT- 659

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             + +  T+ + +SA +    +  G +I  SMV   G+    +  + ++ L  ++G + +
Sbjct: 660 EAEVNMFTYGSAISAAASLANIKQGQQI-HSMVLKTGYDSEREVSNSLISLYAKSGSISD 718

Query: 644 AERVINSQHIQARSDNWWALFSACAAHG 671
           A R  N    +    +W A+ +  + HG
Sbjct: 719 AWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 251/483 (51%), Gaps = 12/483 (2%)

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           I L   M +  VR +  ++  +L  C  +G L    +LH  ++KSGF     ++++L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           YF  G+   A KVF+E         S+N M+    +     +    FR ML   + P+  
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSV--FSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160

Query: 293 TFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           TF  V+ AC+   + +    QVH++    GF++   V+N  I +YS  G I+ A  +F  
Sbjct: 161 TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
           +  KDIV+W  MIS  +Q  L   AIL + +M +  I P  +   S+L++S  I++ E+ 
Sbjct: 221 ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 408 --IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H  V   G  +   V N L++ Y+++ ++  A +IF  M+ R+ +++N+LI+G +  
Sbjct: 281 EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           GF  + L+ F+++    L+PD  T++  LS+CA + +L  G Q+H + +K  + + + L 
Sbjct: 341 GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            +++ LY+KC D++ + + F     ++ + WN ++ AY Q     ++   F+ MQ  G I
Sbjct: 401 GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            P+Q T+ ++L  C+  G +  G +I   ++   GF       S ++D+  + G L  A 
Sbjct: 461 -PNQFTYPSILRTCTSLGALYLGEQIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALAL 518

Query: 646 RVI 648
           R++
Sbjct: 519 RIL 521



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 167/608 (27%), Positives = 280/608 (46%), Gaps = 56/608 (9%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +LH    ++G    P + ++++  Y    D     +VF E  N  V+SW        KM 
Sbjct: 79  RLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSW-------NKMI 131

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           HV  A          +  V+      C           LFR M    +  + Y+FA VL 
Sbjct: 132 HVFVA-------QKSNFQVF------C-----------LFRRMLAEGITPNGYTFAGVLK 167

Query: 198 VCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC- 254
            C  G + F   +Q+HS     GF     V N LI +Y   G +  A KVF      +C 
Sbjct: 168 ACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVF----NCICM 223

Query: 255 -DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D +++  M+ GL+  G  EEA++ F DM  + + P+     SV+SA    +   +G Q+
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K GF + T V N  + +YS   K+  A  IF+ +  +D VS+N++IS   Q+   
Sbjct: 284 HCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFS 343

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  + +MQ   ++PD  T  SLL   AS G +     +H+     G+  +I +  +L
Sbjct: 344 DRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSL 403

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+K   ++ A++ F      NI+ WN ++  +          + F ++ M  + P++
Sbjct: 404 LDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQ 463

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C  + +L  G+QIH +V+K      + + + +I +YAK G L  +LR+   
Sbjct: 464 FTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRR 523

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + E D +SW A+I+ Y QH    EA+  F+ M+  G I+ D   F + +SAC+    +  
Sbjct: 524 LPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRG-IQFDNIGFASAISACAGIRALRQ 582

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA----ERVINSQHIQARSDNWWAL 663
           G +I  +     GF       + ++ L  R G + EA    E++ +  +I     +W +L
Sbjct: 583 GQQI-HAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNI-----SWNSL 636

Query: 664 FSACAAHG 671
            S  A  G
Sbjct: 637 VSGLAQSG 644



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 45/217 (20%)

Query: 23  KLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           K NIS    ++ L++SG++++AL +FV++  + + + ++++  + ++A A+L N   G Q
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRT-EAEVNMFTYGSAISAAASLANIKQGQQ 686

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H+  L+ G  +   V+N+++SLY  +  +    R F+++   +V SW            
Sbjct: 687 IHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISW------------ 734

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              NAMITG +++G     + LF EM    +  ++ +F  VLS 
Sbjct: 735 -------------------NAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSA 775

Query: 199 CD-AGLLEFGR-------QLHSLVTKSG-FSCLVSVV 226
           C   GL++ G        ++H LV KS  + C+V ++
Sbjct: 776 CSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLL 812


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/683 (33%), Positives = 361/683 (52%), Gaps = 41/683 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D Y     L +C   ++ A G Q+H + LR G+K                          
Sbjct: 43  DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMK-------------------------- 76

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                P+VY   T L      G V+ A  +FDK  ++ +  +N MI+G    G       
Sbjct: 77  -----PNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFN 131

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF  M +  +  D ++F S+LS C +   L +GR++H  V ++G +   +V NALI+MY 
Sbjct: 132 LFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYA 191

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG+V DA +VF+       D +S+  +    A  G  +E+L  +  ML   +RPS +T+
Sbjct: 192 KCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITY 249

Query: 295 VSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           ++V+SAC        G Q+HAQ ++S   +   VS A   MY  CG + +A  +F  L  
Sbjct: 250 MNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPN 309

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMI 408
           +D+++WNTMI           A   +  M    + PD  T+ ++L   A  G +   + I
Sbjct: 310 RDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEI 369

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA    +G++++++  NALI+ Y+K   +K A Q+F  M  R++++W  L+ G+   G  
Sbjct: 370 HARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQV 429

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
           V+    F ++L   +  ++ T    L +C+   +L+ GK+IH  V+K  + + +++ NA+
Sbjct: 430 VESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANAL 489

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +++Y KCG ++ ++RV   M  +D ++WN LI   AQ+G G EA+  F+ M+    ++P+
Sbjct: 490 MSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKS-EEMRPN 548

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             TF  V+SAC    LV++G R F SM  DYG +P E H +CM+D+L RAG+L EAE VI
Sbjct: 549 ATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVI 608

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
            +   +  +  W AL +AC AHGN+ +G   A   L+ E      YV LS IYAAAG+W 
Sbjct: 609 LTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWR 668

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           + A +R+L+K  GV K+PG SWI
Sbjct: 669 DVAKLRKLMKERGVKKEPGRSWI 691



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 160/574 (27%), Positives = 276/574 (48%), Gaps = 47/574 (8%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S + ++  N+ ++  +  G  Q+A +LF  +     L+PD ++  + L+AC++     +G
Sbjct: 106 SNKSVVSWNVMISGYAHRGLGQEAFNLFT-LMQQEGLEPDKFTFVSILSACSSPAALNWG 164

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++H   + AGL     V N ++S+Y     +   +RVF  + + D  SWTT   A    
Sbjct: 165 REVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA---- 220

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
               YA                       E+GY    +  +  M +  VR    ++ +VL
Sbjct: 221 ----YA-----------------------ESGYAQESLKTYHAMLQEGVRPSRITYMNVL 253

Query: 197 SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C +   LE G+Q+H+ + +S     V V  AL  MY  CG V DA +VFE       D
Sbjct: 254 SACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNR--D 311

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
            I++N M+ GL   G++EEA   F  ML   + P  +T+++++SAC  P     G ++HA
Sbjct: 312 VIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHA 371

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           +A+K G  +     NA I MYS  G + +A  +F R+ ++D+VSW  ++  YA       
Sbjct: 372 RAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVE 431

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALIS 429
           +   + +M   G+  ++ T+  +L +      ++  + IHA V   GI  ++ V+NAL+S
Sbjct: 432 SFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMS 491

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   ++ A ++   MS R+++TWNTLI G   NG  ++ LQ F  +   E+RP+  T
Sbjct: 492 MYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATT 551

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNM 547
               +S+C   + +  G++    + K+  ++        M+ + A+ G L +    +  M
Sbjct: 552 FVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTM 611

Query: 548 MIEKDTISWNALISAYAQHGE---GKEAVS-CFK 577
             +     W AL++A   HG    G++A   C K
Sbjct: 612 PFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLK 645


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 228/690 (33%), Positives = 368/690 (53%), Gaps = 43/690 (6%)

Query: 51  HKLKP--DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           H+  P  D Y     L +C   ++ A G Q+H + LR G+K                   
Sbjct: 20  HRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVK------------------- 60

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
                       P+VY   T L      G V+ A ++FDK  ++ +  +N MI+G    G
Sbjct: 61  ------------PNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRG 108

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVN 227
                  LF  M +  +  D ++F S+LS C +  +L +GR++H  V ++G +   +V N
Sbjct: 109 LAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN 168

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           ALI+MY  CG+V DA +VF+       D +S+  +    A  G  EE+L  +  ML   +
Sbjct: 169 ALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYGEESLKTYHAMLQERV 226

Query: 288 RPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           RPS +T+++V+SAC        G Q+HA  ++S + +   VS A   MY  CG   +A  
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  L  +D+++WNTMI  +        A   +  M   G+ PD  T+ ++L   A  G 
Sbjct: 287 VFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGG 346

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   + IHA    +G++++++  NALI+ Y+K   +K A Q+F  M  R++++W TL+  
Sbjct: 347 LARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGR 406

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +      V+    F ++L   ++ ++ T    L +C+   +L+ GK+IH  V+K  L++ 
Sbjct: 407 YADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           +++ NA++++Y KCG ++ ++RVF  M  +D ++WN LI    Q+G G EA+  ++ M+ 
Sbjct: 467 LAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKS 526

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
            G ++P+ ATF  VLSAC    LV++G R F  M  DYG +P E H +CM+D+L RAG+L
Sbjct: 527 EG-MRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHL 585

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
            EAE VI +  ++  +  W AL +AC  H N+ +G   A   L+ E     +YV LS IY
Sbjct: 586 REAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIY 645

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AAAG+W + A +R+ +K  GV K+PG SWI
Sbjct: 646 AAAGMWRDVAKLRKFMKERGVKKEPGRSWI 675



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 299/631 (47%), Gaps = 73/631 (11%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G+ N +++L  K         N+ ++  +  G  Q+A +LF  +    +L+PD ++  + 
Sbjct: 77  GSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFT-LMQQERLEPDKFTFVSI 135

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+AC++     +G ++H   + AGL     V N ++S+Y     +   +RVF  + + D 
Sbjct: 136 LSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDE 195

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SWTT   A        YA                       E+GY +  +  +  M + 
Sbjct: 196 VSWTTLTGA--------YA-----------------------ESGYGEESLKTYHAMLQE 224

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            VR    ++ +VLS C +   LE G+Q+H+ + +S +   V V  AL  MY  CG   DA
Sbjct: 225 RVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDA 284

Query: 243 CKVFEEAKGYVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
            +VFE      C    D I++N M+ G    G++EEA   F  ML   + P   T+ +V+
Sbjct: 285 REVFE------CLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVL 338

Query: 299 SACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           SAC  P     G ++HA+A K G  +     NA I MYS  G + +A  +F R+ ++D+V
Sbjct: 339 SACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV 398

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFV 412
           SW T++  YA  +    +   + +M   G++ ++ T+  +L +      ++  + IHA V
Sbjct: 399 SWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEV 458

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G++ ++ V+NAL+S Y K   ++ A ++F  MS R+++TWNTLI G   NG  ++ L
Sbjct: 459 VKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEAL 518

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
           Q +  +    +RP+  T    LS+C   + +  G++   ++ K+  ++        M+ +
Sbjct: 519 QRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDI 578

Query: 532 YAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH-----GEGKEAVSCFKAMQDVGRI 585
            A+ G L +    +  + ++     W AL++A   H     GE + A  C K       +
Sbjct: 579 LARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGE-RAAEHCLK-------L 630

Query: 586 KPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
           +P  A     LSA  + AG+  D  ++   M
Sbjct: 631 EPQNAGLYVSLSAIYAAAGMWRDVAKLRKFM 661


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 379/714 (53%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   + G +Q+++ LFV++ +   + PD  + +  L +C+ L   + G Q+HA A+
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+      + ++ +Y   R L                               D A  
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSL-------------------------------DDALC 205

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F  MP+R+   + A I GC +N     G+ LF EM +L +     S+AS    C A   
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GRQLH+   K+ FS    V  A++ +Y    ++ DA + F     +  +  + N MM
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE--TSNAMM 323

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            GL   G   EA+  F+ M+ +S+R   ++   V SAC   +    G QVH  A+KSGF+
Sbjct: 324 VGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD 383

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NA + +Y  C  + EA +IF  +++KD VSWN +I+   Q       IL + EM
Sbjct: 384 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 443

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
              G++PD+FT+GS+L +   +  +E   M+H  V  +G+ ++  V++ ++  Y K   I
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 503

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++   +  + +++WN +++GF LN    +  + FSE+L   L+PD +T +  L +C
Sbjct: 504 DEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC 563

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A ++++  GKQIHG ++K  ++    + + ++ +YAKCGD+  SL VF  + ++D +SWN
Sbjct: 564 ANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWN 623

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I  YA HG G EA+  F+ MQ    + P+ ATF AVL ACSH GL DDG R F  M  
Sbjct: 624 AMICGYALHGLGVEALRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            Y   P  +H +CM+D+LGR+    EA + INS   QA +  W  L S C    ++ +  
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  +L  + D  SVY+LLSN+YA +G W + +  R LLK+  + K+PGCSWI
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 287/595 (48%), Gaps = 16/595 (2%)

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           +G      V+N +L +Y         +RVF  +   D  SW T L+A +  G +  A  +
Sbjct: 46  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLL 204
           FD MPD D+  +NA+++G  + G     + LF EM +  V  D  +FA +L  C A   L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G Q+H+L  K+G    V   +AL+ MY  C ++ DA   F        + +S+   + 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWVSWGAAIA 223

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
           G     +    L  F +M    L  S+ ++ S   +C    C   G Q+HA A+K+ F +
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V  A + +Y+    + +A   F  L    + + N M+    +  LG  A+  +  M 
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 382 SVGIRPDEFT----FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              IR D  +    F +   + G+ +  + +H     +G   +I V+NA++  Y K + +
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +AY IF  M  ++ ++WN +I     NG     + HF+E+L   ++PD++T    L +C
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + SL +G  +H  V+K+ L S   + + ++ +Y KCG +D + ++ + +  +  +SWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A++S ++ + E +EA   F  M D+G +KPD  TF  VL  C++   ++ G +I   ++ 
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMG-LKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
               +  E   S ++D+  + G  D  + ++  + ++ R   +W A+    A HG
Sbjct: 582 QE-MLDDEYISSTLVDMYAKCG--DMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 379/714 (53%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   + G +Q+++ LFV++ +   + PD  + +  L +C+ L   + G Q+HA A+
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 176

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+      + ++ +Y   R L                               D A  
Sbjct: 177 KTGLEIDVRTGSALVDMYGKCRSL-------------------------------DDALC 205

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F  MP+R+   + A I GC +N     G+ LF EM +L +     S+AS    C A   
Sbjct: 206 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 265

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GRQLH+   K+ FS    V  A++ +Y    ++ DA + F     +  +  + N MM
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE--TSNAMM 323

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            GL   G   EA+  F+ M+ +S+R   ++   V SAC   +    G QVH  A+KSGF+
Sbjct: 324 VGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD 383

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NA + +Y  C  + EA +IF  +++KD VSWN +I+   Q       IL + EM
Sbjct: 384 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 443

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
              G++PD+FT+GS+L +   +  +E   M+H  V  +G+ ++  V++ ++  Y K   I
Sbjct: 444 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 503

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++   +  + +++WN +++GF LN    +  + FSE+L   L+PD +T +  L +C
Sbjct: 504 DEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC 563

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A ++++  GKQIHG ++K  ++    + + ++ +YAKCGD+  SL VF  + ++D +SWN
Sbjct: 564 ANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWN 623

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I  YA HG G EA+  F+ MQ    + P+ ATF AVL ACSH GL DDG R F  M  
Sbjct: 624 AMICGYALHGLGVEALRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 682

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            Y   P  +H +CM+D+LGR+    EA + INS   QA +  W  L S C    ++ +  
Sbjct: 683 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 742

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  +L  + D  SVY+LLSN+YA +G W + +  R LLK+  + K+PGCSWI
Sbjct: 743 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 796



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 287/595 (48%), Gaps = 16/595 (2%)

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           +G      V+N +L +Y         +RVF  +   D  SW T L+A +  G +  A  +
Sbjct: 46  SGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLL 204
           FD MPD D+  +NA+++G  + G     + LF EM +  V  D  +FA +L  C A   L
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G Q+H+L  K+G    V   +AL+ MY  C ++ DA   F        + +S+   + 
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWVSWGAAIA 223

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
           G     +    L  F +M    L  S+ ++ S   +C    C   G Q+HA A+K+ F +
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V  A + +Y+    + +A   F  L    + + N M+    +  LG  A+  +  M 
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343

Query: 382 SVGIRPDEFT----FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              IR D  +    F +   + G+ +  + +H     +G   +I V+NA++  Y K + +
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 402

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +AY IF  M  ++ ++WN +I     NG     + HF+E+L   ++PD++T    L +C
Sbjct: 403 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 462

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + SL +G  +H  V+K+ L S   + + ++ +Y KCG +D + ++ + +  +  +SWN
Sbjct: 463 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 522

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A++S ++ + E +EA   F  M D+G +KPD  TF  VL  C++   ++ G +I   ++ 
Sbjct: 523 AILSGFSLNKESEEAQKFFSEMLDMG-LKPDHFTFATVLDTCANLATIELGKQIHGQIIK 581

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
               +  E   S ++D+  + G  D  + ++  + ++ R   +W A+    A HG
Sbjct: 582 QE-MLDDEYISSTLVDMYAKCG--DMPDSLLVFEKVEKRDFVSWNAMICGYALHG 633


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/714 (33%), Positives = 379/714 (53%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   + G +Q+++ LFV++ +   + PD  + +  L +C+ L   + G Q+HA A+
Sbjct: 160 NALVSGYCQRGMFQESVDLFVEM-ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAV 218

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+      + ++ +Y   R L                               D A  
Sbjct: 219 KTGLEIDVRTGSALVDMYGKCRSL-------------------------------DDALC 247

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F  MP+R+   + A I GC +N     G+ LF EM +L +     S+AS    C A   
Sbjct: 248 FFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSC 307

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GRQLH+   K+ FS    V  A++ +Y    ++ DA + F     +  +  + N MM
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVE--TSNAMM 365

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            GL   G   EA+  F+ M+ +S+R   ++   V SAC   +    G QVH  A+KSGF+
Sbjct: 366 VGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD 425

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NA + +Y  C  + EA +IF  +++KD VSWN +I+   Q       IL + EM
Sbjct: 426 VDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEM 485

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
              G++PD+FT+GS+L +   +  +E   M+H  V  +G+ ++  V++ ++  Y K   I
Sbjct: 486 LRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGII 545

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++   +  + +++WN +++GF LN    +  + FSE+L   L+PD +T +  L +C
Sbjct: 546 DEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTC 605

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A ++++  GKQIHG ++K  ++    + + ++ +YAKCGD+  SL VF  + ++D +SWN
Sbjct: 606 ANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWN 665

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I  YA HG G EA+  F+ MQ    + P+ ATF AVL ACSH GL DDG R F  M  
Sbjct: 666 AMICGYALHGLGVEALRMFERMQK-ENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTT 724

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            Y   P  +H +CM+D+LGR+    EA + INS   QA +  W  L S C    ++ +  
Sbjct: 725 HYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAE 784

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  +L  + D  SVY+LLSN+YA +G W + +  R LLK+  + K+PGCSWI
Sbjct: 785 LAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWI 838



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 161/595 (27%), Positives = 287/595 (48%), Gaps = 16/595 (2%)

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           +G      V+N +L +Y         +RVF  +   D  SW T L+A +  G +  A  +
Sbjct: 88  SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 147

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLL 204
           FD MPD D+  +NA+++G  + G     + LF EM +  V  D  +FA +L  C A   L
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G Q+H+L  K+G    V   +AL+ MY  C ++ DA   F        + +S+   + 
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER--NWVSWGAAIA 265

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
           G     +    L  F +M    L  S+ ++ S   +C    C   G Q+HA A+K+ F +
Sbjct: 266 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V  A + +Y+    + +A   F  L    + + N M+    +  LG  A+  +  M 
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385

Query: 382 SVGIRPDEFT----FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              IR D  +    F +   + G+ +  + +H     +G   +I V+NA++  Y K + +
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQG-QQVHCLAIKSGFDVDICVNNAVLDLYGKCKAL 444

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +AY IF  M  ++ ++WN +I     NG     + HF+E+L   ++PD++T    L +C
Sbjct: 445 MEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKAC 504

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + SL +G  +H  V+K+ L S   + + ++ +Y KCG +D + ++ + +  +  +SWN
Sbjct: 505 AALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN 564

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A++S ++ + E +EA   F  M D+G +KPD  TF  VL  C++   ++ G +I   ++ 
Sbjct: 565 AILSGFSLNKESEEAQKFFSEMLDMG-LKPDHFTFATVLDTCANLATIELGKQIHGQIIK 623

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
               +  E   S ++D+  + G  D  + ++  + ++ R   +W A+    A HG
Sbjct: 624 QE-MLDDEYISSTLVDMYAKCG--DMPDSLLVFEKVEKRDFVSWNAMICGYALHG 675


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 226/667 (33%), Positives = 378/667 (56%), Gaps = 44/667 (6%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +H   +  GL+    +  ++++LY +     S K VF  I+NP             
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENP------------- 259

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF-REMHKLDVRRDNYSFA 193
                             D+ ++N ++  CT+N     G+ +F R +H   ++ D +++ 
Sbjct: 260 -----------------LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYP 302

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           SVL  C   G + +G+ +H+ V KSGF+  V V+++ + MY  C    DA K+F+E    
Sbjct: 303 SVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER 362

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
             D  S+N ++      G+ E+AL  F +M V+  +P  +T  +V+S+C   L    G +
Sbjct: 363 --DVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKE 420

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H + ++SGF     VS+A + MY  CG ++ A  +F ++Q K++VSWN+MI+ Y+ +  
Sbjct: 421 IHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD 480

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
            +S I  +  M   GIRP   T  S+L   + S  +++ + IH ++  N +  +I V+++
Sbjct: 481 SKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS 540

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI  Y K   I  A  +F NM   N+++WN +I+G++  G  ++ L  F+++  + ++PD
Sbjct: 541 LIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPD 600

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVF 545
             T +  L +C++++ L  GK+IH +++++ L I+++ +G A++ +YAKCG +D +L +F
Sbjct: 601 AITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIF 659

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           N + E+D +SW ++I+AY  HG+  EA+  F+ MQ     KPD+ TF A+LSACSHAGLV
Sbjct: 660 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQ-SDAKPDKVTFLAILSACSHAGLV 718

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN-SQHIQARSDNWWALF 664
           D+G   F+ M+ +YGF PA +H SC++DLLGR G L EA  ++  +  I+        LF
Sbjct: 719 DEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLF 778

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           SAC  H  L LG  I  LL+E++ D PS Y++LSN+YA+   W+E   +R  +K  G+ K
Sbjct: 779 SACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKK 838

Query: 725 QPGCSWI 731
            PGCSWI
Sbjct: 839 NPGCSWI 845



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 278/591 (47%), Gaps = 73/591 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +++  + + L +F ++     LKPD ++  + L AC+ L    +G  +H + +++G
Sbjct: 269 MAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG 328

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V ++ + +Y           VF +                        A ++FD
Sbjct: 329 FAMDVVVMSSAVGMYAKCN-------VFED------------------------AIKLFD 357

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
           +MP+RD+  +N +I+   ++G  +  + LF EM     + D+ +  +V+S C   L LE 
Sbjct: 358 EMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLER 417

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+++H  + +SGF+    V +AL+ MY  CG +  A +VFE+ +    + +S+N M+ G 
Sbjct: 418 GKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGY 475

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  G  +  +  FR M    +RP+  T  S++ AC   +  ++G  +H   +++  EA  
Sbjct: 476 SLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADI 535

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+++ I +Y  CG I  A  +F  + + ++VSWN MIS Y +      A++ + +M+  
Sbjct: 536 FVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA 595

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G++PD  TF S+L +   + ++E    IH F+  + +  N  V  AL+  YAK   + +A
Sbjct: 596 GVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEA 655

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF+ +  R+ ++W ++I  +  +G   + L+ F ++  S+ +PD+ T    LS+C+  
Sbjct: 656 LHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHA 715

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             +  G     Y             N MI  Y            F   +E     ++ LI
Sbjct: 716 GLVDEG----CYYF-----------NQMIAEYG-----------FKPAVEH----YSCLI 745

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
               + G  +EA   ++ +Q    I+ D    + + SAC     +D G +I
Sbjct: 746 DLLGRVGRLREA---YEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQI 793



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 36/170 (21%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N  K  ++  N+ ++   + G Y +AL +F  +  +  +KPD  + ++ L AC+ L    
Sbjct: 560 NMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKA-GVKPDAITFTSVLPACSQLAVLE 618

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNA---------------RDLVS--------- 110
            G ++H + + + L+    V   +L +Y                  RD VS         
Sbjct: 619 KGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYG 678

Query: 111 -------VKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKM 149
                    ++F ++Q     PD  ++   LSAC+  G VD  C  F++M
Sbjct: 679 SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQM 728


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 236/725 (32%), Positives = 387/725 (53%), Gaps = 46/725 (6%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +EL ++ N+S    L+  +++G  ++A+ L+ ++H S  + P  Y LS+ L+AC      
Sbjct: 101 EELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRS-GVVPTPYVLSSILSACTKTELF 159

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  +H    + G  +   V N ++SLY   R      RVF ++   D  +        
Sbjct: 160 QLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVT-------- 211

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                  +N +I+G  + G+ D  +G+F EM    +  D+ + A
Sbjct: 212 -----------------------FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIA 248

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+L+ C A G L  G+QLHS + K+G S    +  +L+ +Y   G++ +A ++F+   G 
Sbjct: 249 SLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS--GD 306

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
             + + +N+M+     +  + ++   F  ML A +RP++ T+  ++  C       +G Q
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ 366

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+  +K+GF++   VS   I MYS  G +D+A  I   ++EKD+VSW +MI+ Y Q   
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEF 426

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + A+  + EMQ+ GI PD     S +++   I+ V     IHA V+++G   ++ + N 
Sbjct: 427 CKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNG 486

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  YA+    K+A+  F  +  +  ITWN LI+GF  +G   + L+ F ++  +  + +
Sbjct: 487 LVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYN 546

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T   ++S+ A ++ ++ GKQIH  V+K    S+  + NA+I+LY KCG ++ +   F 
Sbjct: 547 VFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFF 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M +++ +SWN +I+  +QHG G EA+  F  M+  G +KP   TF  VL+ACSH GLV+
Sbjct: 607 EMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQG-LKPSDVTFVGVLTACSHVGLVE 665

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F SM N++G  P  DH +C++D+LGRAG LD A+R +    I A S  W  L SA
Sbjct: 666 EGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H NL +G   A  LLE E    + YVLLSN YA  G W     IR+++K  GV K+P
Sbjct: 726 CKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEP 785

Query: 727 GCSWI 731
           G SWI
Sbjct: 786 GRSWI 790



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 174/622 (27%), Positives = 310/622 (49%), Gaps = 48/622 (7%)

Query: 60  LSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            +  L AC  + R      ++HA A+  GL  Y  + N ++ LY                
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLY---------------- 87

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                           K G V  A  VF+++  RD   + A+++G  +NG  +  + L+R
Sbjct: 88  ---------------AKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EMH+  V    Y  +S+LS C    L + GR +H  V K GF     V NALI++Y  C 
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCR 192

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           +   A +VF +     CD +++N ++ G A  G  + AL  F +M ++ L P  +T  S+
Sbjct: 193 SFRLADRVFCDM--LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASL 250

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC      R G Q+H+  +K+G      +  + + +Y   G I+EA  IF      ++
Sbjct: 251 LAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNV 310

Query: 355 VSWNTMISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHA 410
           V WN M+  Y Q  +L +S  + Y  M + G+RP++FT+  +L +   +G I + E IH+
Sbjct: 311 VLWNLMLVAYGQIDDLAKSFDIFY-RMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHS 369

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
               NG  +++ VS  LI  Y+K   + +A +I   +  +++++W ++I G++ + F  +
Sbjct: 370 LTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKE 429

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F E+    + PD   L+ A+S+CA I ++  G QIH  V  +   + +S+ N ++ 
Sbjct: 430 ALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVY 489

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LYA+CG    +   F  +  K+ I+WN LIS +AQ G  +EA+  F  M   G  K +  
Sbjct: 490 LYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAG-AKYNVF 548

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF + +SA ++   +  G +I   ++   G+    +  + ++ L G+ G +++A+  ++ 
Sbjct: 549 TFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDAK--MDF 605

Query: 651 QHIQARSD-NWWALFSACAAHG 671
             +  R++ +W  + + C+ HG
Sbjct: 606 FEMTKRNEVSWNTIITCCSQHG 627


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/708 (33%), Positives = 376/708 (53%), Gaps = 44/708 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ +G + +AL L+ +     +L+PD Y+  + + ACA L +      +H   L  G  +
Sbjct: 90  LTHNGLFSEALSLYSETQRI-RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGS 148

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             ++ N ++ +Y    DL                               D A +VF++MP
Sbjct: 149 DLYIGNALIDMYCRFNDL-------------------------------DKARKVFEEMP 177

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQ 209
            RD+  +N++I+G   NGY +  + ++     L V  D+Y+ +SVL  C   G +E G  
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 237

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H L+ K G    V V N L++MY     ++D  ++F+  K  + D +S+N M+ G + V
Sbjct: 238 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD--KMVLRDAVSWNTMICGYSQV 295

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G  EE++  F +M V   +P  LT  S++ AC        G  VH   + SG+E  T+ S
Sbjct: 296 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 354

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I MY+ CG +  +  +F+ ++ KD VSWN+MI+ Y Q N      +   +M    ++
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ-NGSFDEAMKLFKMMKTDVK 413

Query: 387 PDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD  T+  LL+ S   G + + + +H  +   G  +NI VSN L+  YAK   +  + ++
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 473

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F NM  R+IITWNT+I   + +     GL+  S +    + PD  T+   L  C+ +++ 
Sbjct: 474 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 533

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK+IHG + K  L S + +GN +I +Y+KCG L  S +VF +M  KD ++W ALISA 
Sbjct: 534 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC 593

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +GEGK+AV  F  M+  G I PD   F A++ ACSH+GLV++G   F  M  DY   P
Sbjct: 594 GMYGEGKKAVRAFGEMEAAG-IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEP 652

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLL R+  LD+AE  I S  ++  S  W AL SAC   G+  +   ++  +
Sbjct: 653 RIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERI 712

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +E   D    YVL+SNIYAA G W++  +IR+ +K  G+ K PGCSW+
Sbjct: 713 IELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 760



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 51/352 (14%)

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIIT 454
           LAS+     +  +H+ +   G+  ++  S  LI+ YA       ++ +F   SP  N+  
Sbjct: 23  LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL 82

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN++I     NG   + L  +SE     L+PD YT    +++CA +      K IH  VL
Sbjct: 83  WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
                S + +GNA+I +Y +  DLD + +VF  M  +D +SWN+LIS Y  +G   EA+ 
Sbjct: 143 DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 202

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVD---------------------------- 606
            +   +++G + PD  T ++VL AC   G V+                            
Sbjct: 203 IYYRFRNLG-VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 261

Query: 607 -------DGTRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARS 657
                  DG RIFD MV         D +S   M+    + G  +E+ ++      Q + 
Sbjct: 262 CKFNGLIDGRRIFDKMV-------LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP 314

Query: 658 D--NWWALFSACAAHGNLRLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAG 705
           D     ++  AC   G+L  G+ +   ++    E D  +  +L+ N+YA  G
Sbjct: 315 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMYAKCG 365


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 238/708 (33%), Positives = 377/708 (53%), Gaps = 44/708 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ +G + +AL L+ +     +L+PD Y+  + + ACA L +      +H   L  G  +
Sbjct: 149 LTHNGLFSEALSLYSETQRI-RLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGS 207

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             ++ N ++ +Y    DL                               D A +VF++MP
Sbjct: 208 DLYIGNALIDMYCRFNDL-------------------------------DKARKVFEEMP 236

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQ 209
            RD+  +N++I+G   NGY +  + ++     L V  D+Y+ +SVL  C   G +E G  
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H L+ K G    V V N L++MY     ++D  ++F+  K  + D +S+N M+ G + V
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD--KMVLRDAVSWNTMICGYSQV 354

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G  EE++  F +M V   +P  LT  S++ AC        G  VH   + SG+E  T+ S
Sbjct: 355 GLYEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 413

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I MY+ CG +  +  +F+ ++ KD VSWN+MI+ Y Q N      +   +M    ++
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ-NGSFDEAMKLFKMMKTDVK 472

Query: 387 PDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD  T+  LL+ S   G + + + +H  +   G  +NI VSN L+  YAK   +  + ++
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 532

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F NM  R+IITWNT+I   + +     GL+  S +    + PD  T+   L  C+ +++ 
Sbjct: 533 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK+IHG + K  L S + +GN +I +Y+KCG L  S +VF +M  KD ++W ALISA 
Sbjct: 593 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC 652

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +GEGK+AV  F  M+  G I PD   F A++ ACSH+GLV++G   F  M  DY   P
Sbjct: 653 GMYGEGKKAVRAFGEMEAAG-IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEP 711

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLL R+  LD+AE  I S  ++  S  W AL SAC   G+  + + ++  +
Sbjct: 712 RIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERI 771

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +E   D    YVL+SN+YAA G W++  +IR+ +K  G+ K PGCSW+
Sbjct: 772 IELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 819



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 155/352 (44%), Gaps = 51/352 (14%)

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIIT 454
           LAS+     +  +H+ +   G+  ++  S  LI+ YA       ++ +F   SP  N+  
Sbjct: 82  LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYX 141

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN++I     NG   + L  +SE     L+PD YT    +++CA +      K IH  VL
Sbjct: 142 WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 201

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
                S + +GNA+I +Y +  DLD + +VF  M  +D +SWN+LIS Y  +G   EA+ 
Sbjct: 202 XMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 261

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVD---------------------------- 606
            +   +++G + PD  T ++VL AC   G V+                            
Sbjct: 262 IYYRFRNLG-VVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY 320

Query: 607 -------DGTRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARS 657
                  DG RIFD MV         D +S   M+    + G  +E+ ++      Q + 
Sbjct: 321 CKFNGLIDGRRIFDKMV-------LRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQFKP 373

Query: 658 D--NWWALFSACAAHGNLRLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAG 705
           D     ++  AC   G+L  G+ +   ++    E D  +  +L+ N+YA  G
Sbjct: 374 DLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI-NMYAKCG 424


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/735 (31%), Positives = 400/735 (54%), Gaps = 48/735 (6%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   ++   N S   +L      +  +R+G  ++A+ L+ Q+H S  + P  Y LS+ 
Sbjct: 97  RRVFEQLSARDNVSWVAML------SGYARNGLGEEAVGLYHQMHCS-GVVPTPYVLSSV 149

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+AC        G  +HA   + G  +   V N +++LY     L   +RVFSE+   D 
Sbjct: 150 LSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDR 209

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            ++ T +S   + G+ + A E+F++M           ++G T                  
Sbjct: 210 VTFNTLISRHAQCGNGESALEIFEEM----------RLSGWTP----------------- 242

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               D  + AS+L+ C + G L  G+QLHS + K+G S    +  +L+ +Y  CG +V+A
Sbjct: 243 ----DCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEA 298

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            ++F+   G   + + +N+M+     +  + ++   F  M+ A +RP+E T+  ++  C 
Sbjct: 299 LEIFK--SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCT 356

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                 +G Q+H  ++K+GFE+   VS   I MYS  G +D+A  I   L+ KD+VSW +
Sbjct: 357 YAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTS 416

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
           MI+ Y Q    + A+  + +MQ  GI PD     S +++   I+ +   + IH+ V+++G
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              ++ + NAL++ YA+  R K+A+ +F  +  ++ ITWN +++GF  +G   + L+ F 
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++  + ++ + +T   ++S+ A ++ ++ GKQIH  V+K    S+  + NA+I+LY KCG
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCG 596

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++ +   F  M E++ +SWN +I++ +QHG G EA+  F  M+  G +KP+  TF  VL
Sbjct: 597 SIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEG-LKPNDVTFIGVL 655

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           +ACSH GLV++G   F SM +++G  P  DH +C++D+LGRAG LD A + +    + A 
Sbjct: 656 AACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSAN 715

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W  L SAC  H N+ +G + A  LLE E    + YVLLSN YA  G W    ++R++
Sbjct: 716 AMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKM 775

Query: 717 LKRTGVIKQPGCSWI 731
           +K  GV K+PG SWI
Sbjct: 776 MKDRGVRKEPGRSWI 790



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 168/549 (30%), Positives = 291/549 (53%), Gaps = 22/549 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A  VF+++  RD   + AM++G   NG  +  +GL+ +MH   V    Y  +S
Sbjct: 89  KKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSS 148

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGY 252
           VLS C  A L E GR +H+ V K G SC  +VV NALI +Y   G++  A +VF E    
Sbjct: 149 VLSACTKAALFEQGRLVHAQVYKQG-SCSETVVGNALIALYLRFGSLSLAERVFSEMP-- 205

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
            CD +++N ++   A  G  E AL  F +M ++   P  +T  S+++AC        G Q
Sbjct: 206 YCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQ 265

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RN 368
           +H+  +K+G      +  + + +Y  CG I EA  IF      ++V WN M+  Y Q  +
Sbjct: 266 LHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISD 325

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSN 425
           L +S  L + +M + G+RP+EFT+  LL +   +G I + E IH      G  +++ VS 
Sbjct: 326 LAKSFDL-FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSG 384

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            LI  Y+K   + +A +I   +  +++++W ++I G++ + F  + L+ F ++ +  + P
Sbjct: 385 VLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWP 444

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   L+ A+S+CA I ++R G+QIH  V  +   + +S+ NA++ LYA+CG    +  +F
Sbjct: 445 DNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLF 504

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +  KD I+WN ++S +AQ G  +EA+  F  M   G +K +  TF + +SA ++   +
Sbjct: 505 EAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG-VKYNVFTFVSSISASANLADI 563

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWA 662
             G +I  +++   G     +  + ++ L G+ G +++A+     Q  +    N   W  
Sbjct: 564 KQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKM----QFFEMSERNHVSWNT 618

Query: 663 LFSACAAHG 671
           + ++C+ HG
Sbjct: 619 IITSCSQHG 627



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 174/343 (50%), Gaps = 5/343 (1%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA+A+  G        N  I +Y+  G +  A  +F +L  +D VSW  M+S YA+  L
Sbjct: 64  IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNA 426
           G  A+  Y +M   G+ P  +   S+L++   +   E   ++HA V+  G  +   V NA
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI+ Y +   +  A ++F  M   + +T+NTLI+     G     L+ F E+ +S   PD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             T++  L++CA I  L  GKQ+H Y+LK  +     +  +++ LY KCG +  +L +F 
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
                + + WN ++ AY Q  +  ++   F  M   G ++P++ T+  +L  C++AG ++
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAG-VRPNEFTYPCLLRTCTYAGEIN 362

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            G +I    +   GF         ++D+  + G+LD+A R++ 
Sbjct: 363 LGEQIHLLSIKT-GFESDMYVSGVLIDMYSKYGWLDKARRILE 404



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 130/247 (52%), Gaps = 2/247 (0%)

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           +V +IHA     G+  +    N LI  YAK   +++A ++F  +S R+ ++W  +++G+ 
Sbjct: 60  LVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYA 119

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NG   + +  + ++  S + P  Y LS  LS+C + +    G+ +H  V K    S+  
Sbjct: 120 RNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETV 179

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +GNA+I LY + G L  + RVF+ M   D +++N LIS +AQ G G+ A+  F+ M+  G
Sbjct: 180 VGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSG 239

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
              PD  T  ++L+AC+  G ++ G ++   ++   G  P       +LDL  + G + E
Sbjct: 240 -WTPDCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVE 297

Query: 644 AERVINS 650
           A  +  S
Sbjct: 298 ALEIFKS 304


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 228/725 (31%), Positives = 389/725 (53%), Gaps = 45/725 (6%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +NT+  +    N  +      G  ++A+ L  +   S   +  + S  + L  CA  ++ 
Sbjct: 54  TNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK---SKSYELGLNSYCSVLQLCAEKKSL 110

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G ++H+  +  G+     +   ++ +Y N  DLV  +++F +I N  V+ W   +S  
Sbjct: 111 EDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 170

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K+G+   +                               + LF++M KL V  + Y+F 
Sbjct: 171 AKIGNFRES-------------------------------VSLFKKMQKLGVVGNCYTFT 199

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            VL    A G ++  +++H  V K GF    +VVN+LI  YF  G V  A  +F+E    
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 259

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
             D +S+N M++G    G     L  F  ML+  +     T VSV+ AC       +G  
Sbjct: 260 --DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRA 317

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +K+ F      SN  + MYS CG ++ A  +F ++ +  IVSW ++I+ Y +  L
Sbjct: 318 LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGL 377

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
              AI  + EMQS G+RPD +T  S++   A S  ++    +H++V  NG+ +N+ V+NA
Sbjct: 378 YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA 437

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI+ YAK   +++A  +F  +  ++I++WNT+I G+  N  P + L+ F ++   + +PD
Sbjct: 438 LINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPD 496

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           + T++  L +CA +++L  G++IHG++L+    S + +  A++ +YAKCG L  +  +F+
Sbjct: 497 DITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFD 556

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           M+ +KD ISW  +I+ Y  HG G EA+S F  M+  G I+PD+++F+A+L+ACSH+GL++
Sbjct: 557 MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-IEPDESSFSAILNACSHSGLLN 615

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G + F+SM N+ G  P  +H +C++DLL R G L +A + I S  I+  +  W  L S 
Sbjct: 616 EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 675

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H +++L   +A  + E E D    YV+L+N+YA A  WEE   +R+ +++ G  + P
Sbjct: 676 CRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNP 735

Query: 727 GCSWI 731
           GCSWI
Sbjct: 736 GCSWI 740


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 378/710 (53%), Gaps = 42/710 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L + SR+ H ++ALHLF  +HSS  L  D  +LS  L  C  L +   G Q+H  +L++G
Sbjct: 76  LFDFSRNNHDREALHLFKDLHSS-GLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSG 134

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V  +++ +Y    D    + +F E+   +V SWT+ LS                
Sbjct: 135 FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS---------------- 178

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
                          G   NG  D  I L  +M    V  + ++FA+VL ++ D  ++E 
Sbjct: 179 ---------------GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H+++ K+GF     V NALI MY     V DA  VF+     V D +++N+M+ G 
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM--VVRDSVTWNIMIGGY 281

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           A++G   E    F  M +A ++ S   F + +  C   R      Q+H   +K+G+E   
Sbjct: 282 AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ 341

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +  A +  YS C  +DEA  +F+      ++V+W  MI  + Q N  + A+  + +M  
Sbjct: 342 DIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSR 401

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            G+RP+ FT+ ++LA      ++  +HA +          V+ AL+ AY K   + ++ +
Sbjct: 402 EGVRPNHFTYSTVLAGKP-SSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC-ARIS 501
           +F+++  ++I+ W+ ++ G        + ++ F +L+   ++P+EYT S  +++C +  +
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++ HGKQIH   +K+   + + + +A++T+Y+K G+++ + +VF    E+D +SWN++I+
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y QHG+ K+A+  F+ MQ+ G +  D  TF  VL+AC+HAGLV++G + F+ M+ DY  
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQG-LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHI 639

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
               +H SCM+DL  RAG  D+A  +IN     A    W  L +AC  H NL LG++ A 
Sbjct: 640 DKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAE 699

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L+  + +    YVLLSNI+A AG WEE A++R+L+    V K+ GCSWI
Sbjct: 700 KLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 280/582 (48%), Gaps = 23/582 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA ++FD+ P +D+  YN ++   + N ++   + LF+++H   +  D  + +  L VC 
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 201 AGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               +  GRQ+H    KSGF   VSV  +L+ MY    +  D   +F+E    + + +S+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMG--IKNVVSW 173

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             ++ G A  G  +E +     M +  + P+  TF +V+ A     +   G QVHA  +K
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +GFE  T V NA I MY     + +A  +F  +  +D V+WN MI  YA           
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 377 YLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  M+  G++     F +   L +    +   + +H  V  NG      +  AL+  Y+K
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 434 NERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
              + +A+++F    +  N++TW  +I GF+ N    + +  F ++    +RP+ +T S 
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYST 413

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L+   + SSL    Q+H  ++K       S+  A++  Y K G++  S RVF  +  KD
Sbjct: 414 VLA--GKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
            ++W+A+++  AQ  + ++A+  F  +   G +KP++ TF++V++AC S A  V+ G +I
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEG-VKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             + V   G   A    S +L +  + G ++ AE+V   Q  +    +W ++ +    HG
Sbjct: 529 HATAVKS-GKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHG 586

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGLWEEA 710
           + +  + +    + + Q  P   V    +  A   AGL EE 
Sbjct: 587 DAK--KALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEG 626



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           R + A+Q+F     ++I  +N L+  F  N    + L  F +L  S L  D  TLS AL 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C  +     G+Q+H   LK+  +  +S+G +++ +Y K  D +    +F+ M  K+ +S
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W +L+S YA++G   E +     MQ  G + P+  TF  VL A +   +++ G ++  +M
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEG-VNPNGFTFATVLGALADESIIEGGVQV-HAM 230

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +   GF       + ++ +  ++  + +AE V +S  ++  S  W  +    AA G
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMIGGYAAIG 285


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/676 (35%), Positives = 361/676 (53%), Gaps = 45/676 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C   R A+ G+++H+Y  +   +    + N +LS++    DLV              
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVE------------- 147

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                             A  VF KM +RDL  +N ++ G  + GY D  + L+  M  +
Sbjct: 148 ------------------AWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +R D Y+F  VL  C  GL  L  GR++H  V + GF   V VVNALITMY  CG++  
Sbjct: 190 GIRPDVYTFPCVLRTC-GGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  VF+       D IS+N M+ G        E L  F  M    + P  +T  SV+SAC
Sbjct: 249 ARLVFDRMPRR--DRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISAC 306

Query: 302 LC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                 R+G +VH   +K+GF A  SV+N+ I M+SS G  DEA M+F++++ KD+VSW 
Sbjct: 307 EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWT 366

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
            MIS Y +  L   A+  Y  M+  G+ PDE T  S+L   A  G ++   M+H F    
Sbjct: 367 AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRT 426

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+ + + V+N+LI  Y+K   I +A ++FH +  +N+I+W ++I G  LN    + L  F
Sbjct: 427 GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFF 486

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++++S L+P+  TL   LS+CARI +L  GK+IH + L+  L     L NA++ +Y +C
Sbjct: 487 QQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRC 545

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G ++ +   FN   EKD  SWN L++ YAQ G+G  AV  F  M +   + PD+ TFT++
Sbjct: 546 GRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIE-SDVNPDEITFTSL 603

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L ACS +G+V DG   F+SM + +   P   H + ++DLLGRAG L++A   I    I  
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP 663

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W AL +AC  + N+ LG + A  + E +      Y+LL N+YA +G W+E A +R+
Sbjct: 664 DPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRK 723

Query: 716 LLKRTGVIKQPGCSWI 731
           +++   +   PGCSW+
Sbjct: 724 IMRENRLTVDPGCSWV 739



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 268/555 (48%), Gaps = 53/555 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N+ +   +++G++ +AL+L+ ++     ++PD+Y+    L  C  L + A G ++H
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWV-GIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +R G ++   V N ++++Y    D+ S + VF                         
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF------------------------- 253

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                 D+MP RD   +NAMI+G  EN     G+ LF  M +  V  D  +  SV+S C+
Sbjct: 254 ------DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           A G    GR++H  V K+GF   VSV N+LI M+ + G   +A  VF  +K    D +S+
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF--SKMEFKDLVSW 365

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             M+ G    G  E+A+  +  M    + P E+T  SV+SAC    +   G  +H  A +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G  +Y  V+N+ I MYS C  ID+A  +F R+  K+++SW ++I    + N      L 
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSFEALF 484

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +   + ++P+  T  S+L   A  G +   + IHA     G+  +  + NAL+  Y +
Sbjct: 485 FFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R++ A+  F N   +++ +WN L+ G+   G     ++ F +++ S++ PDE T +  
Sbjct: 545 CGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 494 LSSCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNM 547
           L +C+R   +  G +      H + +  NL    S+    + L  + G L D    +  M
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV----VDLLGRAGRLEDAYEFIKKM 659

Query: 548 MIEKDTISWNALISA 562
            I+ D   W AL++A
Sbjct: 660 PIDPDPAIWGALLNA 674



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 190/345 (55%), Gaps = 7/345 (2%)

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
           G +E+ALI    M    +   E T+++++  C   R    G +VH+   K+       + 
Sbjct: 73  GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ++M+   G + EA  +F ++ E+D+ SWN ++  YA+      A+  Y  M  VGIR
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD +TF  +L + G +  +     +H  V   G  +++ V NALI+ Y K   I  A  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M  R+ I+WN +I+G+  N   ++GL+ F  +    + PD  T++  +S+C  +   
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R G+++HGYV+K   ++++S+ N++I +++  G  D +  VF+ M  KD +SW A+IS Y
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            ++G  ++AV  +  M+  G + PD+ T  +VLSAC+  GL+D G
Sbjct: 373 EKNGLPEKAVETYTIMEHEG-VVPDEITIASVLSACAGLGLLDKG 416



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 181/375 (48%), Gaps = 19/375 (5%)

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL--------ASSGFIEMVEMIH 409
           N++I     +     A++    MQ + +  +E T+ +LL        AS G       +H
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEG-----SRVH 117

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           ++V        +++ NAL+S + +   + +A+ +F  M+ R++ +WN L+ G+   G+  
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD 177

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  +  +L   +RPD YT    L +C  +  L  G+++H +V++    S + + NA+I
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           T+Y KCGD+  +  VF+ M  +D ISWNA+IS Y ++    E +  F  M++   + PD 
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDL 296

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            T T+V+SAC   G    G  +   ++   GF+      + ++ +    G  DEAE V +
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKT-GFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLW 707
               +    +W A+ S    +G L    +    ++E E   P    + S + A A  GL 
Sbjct: 356 KMEFKDLV-SWTAMISGYEKNG-LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413

Query: 708 EEAANIRELLKRTGV 722
           ++   + E   RTG+
Sbjct: 414 DKGIMLHEFADRTGL 428


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 239/676 (35%), Positives = 361/676 (53%), Gaps = 45/676 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C   R A+ G+++H+Y  +   +    + N +LS++    DLV              
Sbjct: 101 LRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVE------------- 147

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                             A  VF KM +RDL  +N ++ G  + GY D  + L+  M  +
Sbjct: 148 ------------------AWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +R D Y+F  VL  C  GL  L  GR++H  V + GF   V VVNALITMY  CG++  
Sbjct: 190 GIRPDVYTFPCVLRTC-GGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  VF+       D IS+N M+ G        E L  F  M    + P  +T  SV+SAC
Sbjct: 249 ARLVFDRMPRR--DRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISAC 306

Query: 302 LC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                 R+G +VH   +K+GF A  SV+N+ I M+SS G  DEA M+F++++ KD+VSW 
Sbjct: 307 EALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWT 366

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
            MIS Y +  L   A+  Y  M+  G+ PDE T  S+L   A  G ++   M+H F    
Sbjct: 367 AMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRT 426

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+ + + V+N+LI  Y+K   I +A ++FH +  +N+I+W ++I G  LN    + L  F
Sbjct: 427 GLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFF 486

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++++S L+P+  TL   LS+CARI +L  GK+IH + L+  L     L NA++ +Y +C
Sbjct: 487 QQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRC 545

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G ++ +   FN   EKD  SWN L++ YAQ G+G  AV  F  M +   + PD+ TFT++
Sbjct: 546 GRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIE-SDVNPDEITFTSL 603

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L ACS +G+V DG   F+SM + +   P   H + ++DLLGRAG L++A   I    I  
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP 663

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W AL +AC  + N+ LG + A  + E +      Y+LL N+YA +G W+E A +R+
Sbjct: 664 DPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRK 723

Query: 716 LLKRTGVIKQPGCSWI 731
           +++   +   PGCSW+
Sbjct: 724 IMRENRLTVDPGCSWV 739



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 152/555 (27%), Positives = 269/555 (48%), Gaps = 53/555 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N+ +   +++G++ +AL+L+ ++     ++PD+Y+    L  C  L + A G ++H
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWV-GIRPDVYTFPCVLRTCGGLPDLARGREVH 218

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +R G ++   V N ++++Y    D+ S + VF                         
Sbjct: 219 LHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF------------------------- 253

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                 D+MP RD   +NAMI+G  EN     G+ LF  M +  V  D  +  SV+S C+
Sbjct: 254 ------DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACE 307

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           A G    GR++H  V K+GF   VSV N+LI M+ + G   +A  VF  +K    D +S+
Sbjct: 308 ALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVF--SKMEFKDLVSW 365

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             M+ G    G  E+A+  +  M    + P E+T  SV+SAC    +   G  +H  A +
Sbjct: 366 TAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADR 425

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G  +Y  V+N+ I MYS C  ID+A  +F R+  K+++SW ++I    + N      L 
Sbjct: 426 TGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSFEALF 484

Query: 377 YLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +   + ++P+  T  S+L++    G +   + IHA     G+  +  + NAL+  Y +
Sbjct: 485 FFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVR 544

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R++ A+  F N   +++ +WN L+ G+   G     ++ F +++ S++ PDE T +  
Sbjct: 545 CGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSL 603

Query: 494 LSSCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           L +C+R   +  G +      H + +  NL    S+    + L  + G L+ +      M
Sbjct: 604 LCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASV----VDLLGRAGRLEDAYEFIKKM 659

Query: 549 -IEKDTISWNALISA 562
            I+ D   W AL++A
Sbjct: 660 PIDPDPAIWGALLNA 674



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 190/345 (55%), Gaps = 7/345 (2%)

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
           G +E+ALI    M    +   E T+++++  C   R    G +VH+   K+       + 
Sbjct: 73  GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ++M+   G + EA  +F ++ E+D+ SWN ++  YA+      A+  Y  M  VGIR
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIR 192

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD +TF  +L + G +  +     +H  V   G  +++ V NALI+ Y K   I  A  +
Sbjct: 193 PDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLV 252

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M  R+ I+WN +I+G+  N   ++GL+ F  +    + PD  T++  +S+C  +   
Sbjct: 253 FDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDE 312

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R G+++HGYV+K   ++++S+ N++I +++  G  D +  VF+ M  KD +SW A+IS Y
Sbjct: 313 RLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGY 372

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            ++G  ++AV  +  M+  G + PD+ T  +VLSAC+  GL+D G
Sbjct: 373 EKNGLPEKAVETYTIMEHEG-VVPDEITIASVLSACAGLGLLDKG 416



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 181/375 (48%), Gaps = 19/375 (5%)

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL--------ASSGFIEMVEMIH 409
           N++I     +     A++    MQ + +  +E T+ +LL        AS G       +H
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEG-----SRVH 117

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           ++V        +++ NAL+S + +   + +A+ +F  M+ R++ +WN L+ G+   G+  
Sbjct: 118 SYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFD 177

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  +  +L   +RPD YT    L +C  +  L  G+++H +V++    S + + NA+I
Sbjct: 178 EALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALI 237

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           T+Y KCGD+  +  VF+ M  +D ISWNA+IS Y ++    E +  F  M++   + PD 
Sbjct: 238 TMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF-FVDPDL 296

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            T T+V+SAC   G    G  +   ++   GF+      + ++ +    G  DEAE V +
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKT-GFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLW 707
               +    +W A+ S    +G L    +    ++E E   P    + S + A A  GL 
Sbjct: 356 KMEFKDLV-SWTAMISGYEKNG-LPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLL 413

Query: 708 EEAANIRELLKRTGV 722
           ++   + E   RTG+
Sbjct: 414 DKGIMLHEFADRTGL 428


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 251/745 (33%), Positives = 400/745 (53%), Gaps = 55/745 (7%)

Query: 6   ITATIA-GNSNTSKELLLKL---NISLANLSRSGHYQ-----DALHLFVQIHSSHKLKPD 56
           ITA +  G  + + +L +++   N+   N+  SGH +     +A+  F  +  +  +K  
Sbjct: 290 ITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKT-GVKST 348

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
             +L + L+A A+L    +G  +HA A++ GL +  +V ++++++Y              
Sbjct: 349 RSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMY-------------- 394

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                         + C KM   + A +VFD + +R+L ++NAM+ G  +NGY    + L
Sbjct: 395 --------------AKCEKM---EAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKL 437

Query: 177 FREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           F EM       D +++ S+LS C     LE GRQLHS + K  F   + V N L+ MY  
Sbjct: 438 FSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAK 497

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG + +A + FE  +    D++S+N ++ G       +EA   FR M++  + P E++  
Sbjct: 498 CGALEEARQQFEFIRNR--DNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLA 555

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S++S C   +    G QVH   +KSG +      ++ I MY  CG I+ A  +F+ +  +
Sbjct: 556 SILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSR 615

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSG--FIEMVEMIH 409
            +VS N +I+ YAQ +L   AI  + EMQ+ G+ P E TF SLL A +G   + +   IH
Sbjct: 616 SVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIH 674

Query: 410 AFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGF 467
             +   G++ +   +  +L+  Y  ++R   A  +F     P++ I W  +I+G   NG 
Sbjct: 675 CLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGC 734

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + LQ + E+  +  RPD+ T +  L +C+ ++SL  G+ IH  +    L S    G+A
Sbjct: 735 SEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSA 794

Query: 528 MITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +YAKCGD+  S++VF  M  K D ISWN++I  +A++G  + A+  F  M+   RI+
Sbjct: 795 VVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHT-RIR 853

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  TF  VL+ACSHAG V +G  IFD MV+ Y  +P  DH +CM+DLLGR G+L EAE 
Sbjct: 854 PDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEE 913

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I+  + +  +  W  L  AC  HG+   GR  A  L+E E +  S YVLLSNIYAA+G 
Sbjct: 914 FIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGN 973

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W+E  ++R  ++  G+ K PGCSWI
Sbjct: 974 WDEVNSVRRAMREKGLRKLPGCSWI 998



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 189/698 (27%), Positives = 322/698 (46%), Gaps = 50/698 (7%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  +L  N  L+  SR G  +  +  F  + +   + P+ ++ +  L++CA L +   G 
Sbjct: 144 KRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNC-GVSPNQFTYAIVLSSCARLVDIDLGK 202

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT---------- 127
           Q+H   ++ G +       +++ +Y     LV  +++F  + +PD  SWT          
Sbjct: 203 QVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVG 262

Query: 128 -------------------------TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT 162
                                    T ++AC  +G +D AC++F +MP+ ++  +N MI+
Sbjct: 263 LPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMIS 322

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSC 221
           G  + G +   I  F+ M K  V+    +  SVLS +     L +G  +H+   K G + 
Sbjct: 323 GHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNS 382

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            V V ++LI MY  C  +  A KVF+       + + +N M+ G A  G   + +  F +
Sbjct: 383 NVYVGSSLINMYAKCEKMEAAKKVFDALDER--NLVLWNAMLGGYAQNGYASKVMKLFSE 440

Query: 282 MLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M      P E T+ S++SAC    C  +G Q+H+  +K  FE    V N  + MY+ CG 
Sbjct: 441 MRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGA 500

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
           ++EA   F  ++ +D VSWN +I  Y Q      A   +  M   GI PDE +  S+L  
Sbjct: 501 LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSG 560

Query: 397 -ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            A+   +E  E +H F+  +G+ T +   ++LI  Y K   I+ A  +F  M  R++++ 
Sbjct: 561 CANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSM 620

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N +I G+  N   V+ +  F E+    L P E T +  L +C     L  G+QIH  + K
Sbjct: 621 NAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQK 679

Query: 516 NNLISKMS-LGNAMITLYAKCG-DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
             L+     LG +++ +Y       D  +        K TI W A+IS + Q+G  +EA+
Sbjct: 680 RGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEAL 739

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             ++ M      +PDQATF +VL ACS    + DG R+  S++   G    E   S ++D
Sbjct: 740 QLYQEMHR-NNARPDQATFASVLRACSILASLGDG-RMIHSLIFHVGLDSDELTGSAVVD 797

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +  + G +  + +V      +    +W ++    A +G
Sbjct: 798 MYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNG 835



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 141/481 (29%), Positives = 258/481 (53%), Gaps = 39/481 (8%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G+V++A + F+++  RD+  +N++++  +  G  +  I  F  +    V  + +++A 
Sbjct: 128 KCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAI 187

Query: 195 VLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C   + ++ G+Q+H  V K GF        +LI MY  CG++VDA K+F+      
Sbjct: 188 VLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDP- 246

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            D +S+  M+ G   VG  EEAL  F DM    L P ++ FV+V++AC+           
Sbjct: 247 -DTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACV----------- 294

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
                                  G++D+AC +F ++   ++V+WN MIS + +R     A
Sbjct: 295 ---------------------GLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEA 333

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           I  +  M   G++    T GS+L++   +E +    ++HA     G+ +N+ V ++LI+ 
Sbjct: 334 IDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINM 393

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK E+++ A ++F  +  RN++ WN ++ G+  NG+  + ++ FSE+      PDE+T 
Sbjct: 394 YAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTY 453

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LS+CA +  L  G+Q+H +++K+N    + + N ++ +YAKCG L+ + + F  +  
Sbjct: 454 TSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRN 513

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D +SWNA+I  Y Q  +  EA + F+ M   G I PD+ +  ++LS C++   ++ G +
Sbjct: 514 RDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDG-IAPDEVSLASILSGCANLQALEQGEQ 572

Query: 611 I 611
           +
Sbjct: 573 V 573



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 234/486 (48%), Gaps = 55/486 (11%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H+   K GF     + +A++ +Y  CGNV  A K F + +    D +++N ++   +
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKR--DILAWNSVLSMYS 158

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
             G +E+ +  F  +    + P++ T+  V+S+C   +   +G QVH   +K GFE  + 
Sbjct: 159 RQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSF 218

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
              + I MYS CG + +A  IF  + + D VSW  MI+ Y Q  L   A+  + +MQ +G
Sbjct: 219 CEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLG 278

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           + PD+  F            V +I A V +                     R+  A  +F
Sbjct: 279 LVPDQVAF------------VTVITACVGLG--------------------RLDDACDLF 306

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M   N++ WN +I+G +  G  ++ +  F  +  + ++    TL   LS+ A + +L 
Sbjct: 307 VQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALN 366

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           +G  +H   +K  L S + +G+++I +YAKC  ++ + +VF+ + E++ + WNA++  YA
Sbjct: 367 YGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYA 426

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           Q+G   + +  F  M+  G   PD+ T+T++LSAC+    ++ G R   S +  + F   
Sbjct: 427 QNGYASKVMKLFSEMRGCG-FWPDEFTYTSILSACACLECLEMG-RQLHSFIIKHNFEYN 484

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
               + ++D+  + G L+EA +    + I+ R +  W                II G + 
Sbjct: 485 LFVENTLVDMYAKCGALEEARQQF--EFIRNRDNVSW--------------NAIIVGYVQ 528

Query: 685 EREQDK 690
           E ++D+
Sbjct: 529 EEDEDE 534



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 195/455 (42%), Gaps = 81/455 (17%)

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R    +HAQ +K GF +   + +A + +Y+ CG ++ A   F +L+++DI++WN+++S Y
Sbjct: 98  RTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMY 157

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNI 421
           +++      I  +  +Q+ G+ P++FT+  +L+S      I++ + +H  V   G   N 
Sbjct: 158 SRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNS 217

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
               +LI  Y+K   +  A +IF  +   + ++W  +I G++  G P + L+ F ++   
Sbjct: 218 FCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKL 277

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            L PD+      +++C  +                                   G LD +
Sbjct: 278 GLVPDQVAFVTVITACVGL-----------------------------------GRLDDA 302

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS- 600
             +F  M   + ++WN +IS + + G   EA+  FK M   G +K  ++T  +VLSA + 
Sbjct: 303 CDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTG-VKSTRSTLGSVLSAIAS 361

Query: 601 ----------HAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLL----------- 635
                     HA  +  G      +  S++N Y      +    + D L           
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421

Query: 636 ----GRAGYLDEAERVINSQHIQARSDNWW-------ALFSACAAHGNLRLGRIIAGLLL 684
                + GY  +  ++ +    + R   +W       ++ SACA    L +GR +   ++
Sbjct: 422 LGGYAQNGYASKVMKLFS----EMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFII 477

Query: 685 ERE-QDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
           +   +    V   L ++YA  G  EEA    E ++
Sbjct: 478 KHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIR 512



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 106/201 (52%), Gaps = 19/201 (9%)

Query: 481 SELRPDEYTLSVALSSCARISSLRH---------------GKQIHGYVLKNNLISKMSLG 525
           SE +   + L + L  C RI  +RH                K IH   LK    SK  LG
Sbjct: 61  SEHKIFTHLLKICLQQCQRIK-IRHPFDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLG 119

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A++ LYAKCG+++ + + FN + ++D ++WN+++S Y++ G  ++ + CF ++Q+ G +
Sbjct: 120 SAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCG-V 178

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            P+Q T+  VLS+C+    +D G ++   ++   GF         ++D+  + G L +A 
Sbjct: 179 SPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK-MGFEFNSFCEGSLIDMYSKCGSLVDAR 237

Query: 646 RVINSQHIQARSDNWWALFSA 666
           ++ ++  +   + +W A+ + 
Sbjct: 238 KIFDAV-VDPDTVSWTAMIAG 257


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 229/712 (32%), Positives = 378/712 (53%), Gaps = 86/712 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++G+ ++A+ LF QI                L+AC  +    FG QLH   L+ G
Sbjct: 237 ISGLSQNGYEEEAMLLFCQI---------------VLSACTKVEFFEFGKQLHGLVLKQG 281

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N +++LY                               ++ G++  A ++F 
Sbjct: 282 FSSETYVCNALVTLY-------------------------------SRSGNLSSAEQIFH 310

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVLSVC-DAGLLE 205
            M  RD   YN++I+G  + GY +  + LF++M+ LD ++ D  + AS+LS C   G L 
Sbjct: 311 CMSQRDRVSYNSLISGLAQQGYINRALALFKKMN-LDCQKPDCVTVASLLSACASVGALP 369

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+Q HS   K+G +  + V  +L+ +Y  C ++  A + F      +C           
Sbjct: 370 NGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF------LC----------- 412

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAY 322
              +  + ++   F  M +  + P++ T+ S++  C       +G Q+H Q +K+GF+  
Sbjct: 413 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 472

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             VS+  I MY+  GK+D A  IF RL+E D+VSW  MI+ Y Q +    A+  + EMQ 
Sbjct: 473 VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 532

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            GI+ D   F S +++   I+ ++    IHA   ++G   ++ + NAL+S YA+  ++++
Sbjct: 533 QGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVRE 592

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           AY  F  +  ++ ++WN+L++GF  +G+  + L  F+++  + L  + +T   A+S+ A 
Sbjct: 593 AYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAAN 652

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           I+++R GKQIHG + K    S+  + NA+ITLYAKCG +D              ISWN++
Sbjct: 653 IANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTID-------------DISWNSM 699

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I+ Y+QHG G EA+  F+ M+ +  + P+  TF  VLSACSH GLVD+G   F SM   +
Sbjct: 700 ITGYSQHGCGFEALKLFEDMKQLD-VLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAH 758

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
             +P  +H +C++DLLGR+G L  A+R +    IQ  +  W  L SAC  H N+ +G   
Sbjct: 759 NLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFA 818

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  LLE E    + YVL+SN+YA +G W+     R+++K  GV K+PG SW+
Sbjct: 819 ASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWV 870



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 284/593 (47%), Gaps = 74/593 (12%)

Query: 60  LSTTLAACA-NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            +  L  C+ N  +  F  Q+HA  + +G ++   + N ++ LY     L S K+VF  +
Sbjct: 166 FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL 225

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           +  D  SW                                AMI+G ++NGYE+  + LF 
Sbjct: 226 KARDSVSWV-------------------------------AMISGLSQNGYEEEAMLLFC 254

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           ++              VLS C      EFG+QLH LV K GFS    V NAL+T+Y   G
Sbjct: 255 QI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSG 300

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           N+  A ++F        D +SYN ++ GLA  G +  AL  F+ M +   +P  +T  S+
Sbjct: 301 NLSSAEQIFHCMSQR--DRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASL 358

Query: 298 MSACLC----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           +SAC      P  G Q H+ A+K+G  +   V  + + +Y  C  I  A   F    + D
Sbjct: 359 LSACASVGALPN-GKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLD 417

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHA 410
                         NL +S  + + +MQ  GI P++FT+ S+L +    G  ++ E IH 
Sbjct: 418 --------------NLNKSFQI-FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHT 462

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            V   G   N+ VS+ LI  YAK+ ++  A +IF  +   ++++W  +I G+  +    +
Sbjct: 463 QVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTE 522

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F E+    ++ D    + A+S+CA I +L  G+QIH     +     +S+GNA+++
Sbjct: 523 ALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVS 582

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LYA+CG +  +   F+ +  KD +SWN+L+S +AQ G  +EA++ F  M   G ++ +  
Sbjct: 583 LYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG-LEINSF 641

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           TF + +SA ++   V  G +I   M+   G+    +  + ++ L  + G +D+
Sbjct: 642 TFGSAVSAAANIANVRIGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDD 693



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/609 (29%), Positives = 290/609 (47%), Gaps = 68/609 (11%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G ++ A  VFD+MP R L  +N +              GLFR M   +V  D   FA V
Sbjct: 110 FGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVV 169

Query: 196 LSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L  C  +A    F  Q+H+    SGF     + N LI +YF  G +  A KVFE  K   
Sbjct: 170 LRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKAR- 228

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            D +S+  M+ GL+  G  EEA++ F  +++++    E               G Q+H  
Sbjct: 229 -DSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFF-----------EFGKQLHGL 276

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K GF + T V NA +T+YS  G +  A  IF  + ++D VS+N++IS  AQ+     A
Sbjct: 277 VLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRA 336

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  + +M     +PD  T  SLL   AS G +   +  H++    G+ ++I V  +L+  
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   IK A++ F        + +  L N   LN    +  Q F+++ +  + P+++T 
Sbjct: 397 YVKCSDIKTAHEFF--------LCYGQLDN---LN----KSFQIFTQMQIEGIVPNQFTY 441

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              L +C  + +   G+QIH  VLK      + + + +I +YAK G LD +L++F  + E
Sbjct: 442 PSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKE 501

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            D +SW A+I+ Y QH +  EA++ FK MQD G IK D   F + +SAC+    +D G +
Sbjct: 502 NDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQG-IKSDNIGFASAISACAGIQALDQGRQ 560

Query: 611 IF---------------DSMVNDYGF-------------IPAEDHLS--CMLDLLGRAGY 640
           I                +++V+ Y               I A+D++S   ++    ++GY
Sbjct: 561 IHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGY 620

Query: 641 LDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS-VYVL 696
            +EA  +   +N   ++  S  + +  SA A   N+R+G+ I G++ +   D  + V   
Sbjct: 621 FEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNA 680

Query: 697 LSNIYAAAG 705
           L  +YA  G
Sbjct: 681 LITLYAKCG 689



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 277/588 (47%), Gaps = 110/588 (18%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L++ G+   AL LF +++   + KPD  ++++ L+ACA++     G Q H+YA+
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQ-KPDCVTVASLLSACASVGALPNGKQFHSYAI 379

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVK----------------RVFSEIQ----NPDVY 124
           +AG+ +   V  ++L LY    D+ +                  ++F+++Q     P+ +
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQF 439

Query: 125 SWTTFLSACT-----------------------------------KMGHVDYACEVFDKM 149
           ++ + L  CT                                   K G +D+A ++F ++
Sbjct: 440 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRL 499

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFG 207
            + D+  + AMI G T++      + LF+EM    ++ DN  FAS +S C AG+  L+ G
Sbjct: 500 KENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISAC-AGIQALDQG 558

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           RQ+H+    SG+S  +S+ NAL+++Y  CG V +A   F++   Y  D++S+N ++ G A
Sbjct: 559 RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQI--YAKDNVSWNSLVSGFA 616

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
             G  EEAL  F  M  A L  +  TF S +SA       R+G Q+H    K+G+++ T 
Sbjct: 617 QSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETE 676

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           VSNA IT+Y+ CG ID+             +SWN+MI+ Y+Q   G  A+  + +M+ + 
Sbjct: 677 VSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLD 723

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           + P+  TF  +L++   + +V+         GI     +S A                  
Sbjct: 724 VLPNHVTFVGVLSACSHVGLVD--------EGISYFRSMSEA------------------ 757

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           HN+ P+    +  +++    +G   +  +   E+    ++PD       LS+C    ++ 
Sbjct: 758 HNLVPKP-EHYACVVDLLGRSGLLSRAKRFVEEM---PIQPDAMVWRTLLSACNVHKNID 813

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMIT-LYAKCGDLDCSLRVFNMMIEK 551
            G+    ++L+  L  K S    +++ +YA  G  DC  R   MM ++
Sbjct: 814 IGEFAASHLLE--LEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDR 859



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 238/532 (44%), Gaps = 75/532 (14%)

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +S++ F +      H D      D++P+++    N M    +       GIG    M + 
Sbjct: 33  FSFSAFSNTALNYAHND------DEIPEKE----NEMDGNAS-------GIGYLHLMEQH 75

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            VR ++ +F  +L  C             L ++S +  L      LI  Y   G++  A 
Sbjct: 76  GVRANSQTFLWLLEGC-------------LNSRSFYDGL-----KLIDFYLAFGDLNCAV 117

Query: 244 KVFEEA--KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            VF+E   +   C +  +N  +     +GRV      FR ML  ++   E  F  V+  C
Sbjct: 118 NVFDEMPIRSLSCWNRIFNTFI-AERLMGRVPGL---FRRMLTKNVEFDERIFAVVLRGC 173

Query: 302 LCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
               V +    Q+HA+ + SGFE+ T + N  I +Y   G +  A  +F  L+ +D VSW
Sbjct: 174 SGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSW 233

Query: 358 NTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFING 416
             MIS  +Q      A+L + ++  S   + + F FG            + +H  V   G
Sbjct: 234 VAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFG------------KQLHGLVLKQG 281

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             +   V NAL++ Y+++  +  A QIFH MS R+ +++N+LI+G    G+  + L  F 
Sbjct: 282 FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFK 341

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++ +   +PD  T++  LS+CA + +L +GKQ H Y +K  + S + +  +++ LY KC 
Sbjct: 342 KMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 401

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           D+  +   F                 Y Q     ++   F  MQ  G I P+Q T+ ++L
Sbjct: 402 DIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEG-IVPNQFTYPSIL 445

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             C+  G  D G +I  + V   GF       S ++D+  + G LD A ++ 
Sbjct: 446 KTCTTLGATDLGEQI-HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIF 496


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 377/710 (53%), Gaps = 42/710 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L + SR+ H ++ALHLF  +HSS  L  D  +LS  L  C  L +   G Q+H  +L++G
Sbjct: 76  LFDFSRNNHDREALHLFKDLHSS-GLGVDGLTLSCALKVCGVLFDQVVGRQVHCQSLKSG 134

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V  +++ +Y    D    + +F E+   +V SWT+ LS                
Sbjct: 135 FLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLS---------------- 178

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
                          G   NG  D  I L  +M    V  + ++FA+VL ++ D  ++E 
Sbjct: 179 ---------------GYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEG 223

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H+++ K+GF     V NALI MY     V DA  VF+     V D +++N+M+ G 
Sbjct: 224 GVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSM--VVRDSVTWNIMIGGY 281

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           A++G   E    F  M +A ++ S   F + +  C   R      Q+H   +K+G+E   
Sbjct: 282 AAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQ 341

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +  A +  YS C  +DEA  +F+      ++V+W  MI  + Q N    A+  + +M  
Sbjct: 342 DIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSR 401

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            G+RP+ FT+ ++LA      ++  +HA +          V+ AL+ AY K   + ++ +
Sbjct: 402 EGVRPNHFTYSTVLAGKP-SSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC-ARIS 501
           +F+++  ++I+ W+ ++ G        + ++ F +L+   ++P+EYT S  +++C +  +
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++ HGKQIH   +K+   + + + +A++T+Y+K G+++ + +VF    E+D +SWN++I+
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y QHG+ K+A+  F+ MQ+ G +  D  TF  VL+AC+HAGLV++G + F+ M+ DY  
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQG-LPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHI 639

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
               +H SCM+DL  RAG  D+A  +IN     A    W  L +AC  H NL LG++ A 
Sbjct: 640 DKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAE 699

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L+  + +    YVLLSNI+A AG WEE A++R+L+    V K+ GCSWI
Sbjct: 700 KLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 266/543 (48%), Gaps = 18/543 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA ++FD+ P +D+  YN ++   + N ++   + LF+++H   +  D  + +  L VC 
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 201 AGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               +  GRQ+H    KSGF   VSV  +L+ MY    +  D   +F+E    + + +S+
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMG--IKNVVSW 173

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
             ++ G A  G  +E +     M +  + P+  TF +V+ A     +   G QVHA  +K
Sbjct: 174 TSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVK 233

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +GFE  T V NA I MY     + +A  +F  +  +D V+WN MI  YA           
Sbjct: 234 NGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQM 293

Query: 377 YLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  M+  G++     F +   L +    +   + +H  V  NG      +  AL+  Y+K
Sbjct: 294 FHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSK 353

Query: 434 NERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
              + +A+++F    +  N++TW  +I GF+ N    + +  F ++    +RP+ +T S 
Sbjct: 354 CSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYST 413

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L+   + SSL    Q+H  ++K       S+  A++  Y K G++  S RVF  +  KD
Sbjct: 414 VLA--GKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
            ++W+A+++  AQ  + ++A+  F  +   G +KP++ TF++V++AC S A  V+ G +I
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEG-VKPNEYTFSSVINACSSSAATVEHGKQI 528

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             + V   G   A    S +L +  + G ++ AE+V   Q  +    +W ++ +    HG
Sbjct: 529 HATAVKS-GKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQHG 586

Query: 672 NLR 674
           + +
Sbjct: 587 DAK 589



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 219/470 (46%), Gaps = 17/470 (3%)

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A ++F+E       H  YN ++   +      EAL  F+D+  + L    LT    +  C
Sbjct: 57  AHQLFDETPLKDISH--YNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 302 ---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                  VG QVH Q++KSGF    SV  + + MY      ++   IF  +  K++VSW 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFIN 415
           +++S YA+  L    I    +MQ  G+ P+ FTF ++   LA    IE    +HA +  N
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G      V NALI  Y K+E +  A  +F +M  R+ +TWN +I G+   GF ++G Q F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + ++ ++        AL  C++   L   KQ+H  V+KN       +  A++  Y+KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354

Query: 536 GDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
             +D + ++F+M     + ++W A+I  + Q+   ++AV  F  M   G ++P+  T++ 
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREG-VRPNHFTYST 413

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           VL+    + L     +I  +    Y  +P+    + +LD   + G + E+ RV  S  I 
Sbjct: 414 VLAGKPSSLLSQLHAQIIKAY---YEKVPSV--ATALLDAYVKTGNVVESARVFYS--IP 466

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           A+    W+      A        +   + L +E  KP+ Y   S I A +
Sbjct: 467 AKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACS 516



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 3/236 (1%)

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           R + A+Q+F     ++I  +N L+  F  N    + L  F +L  S L  D  TLS AL 
Sbjct: 53  RPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALK 112

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C  +     G+Q+H   LK+  +  +S+G +++ +Y K  D +    +F+ M  K+ +S
Sbjct: 113 VCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVS 172

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W +L+S YA++G   E +     MQ  G + P+  TF  VL A +   +++ G ++  +M
Sbjct: 173 WTSLLSGYARNGLNDEVIHLINQMQMEG-VNPNGFTFATVLGALADESIIEGGVQV-HAM 230

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +   GF       + ++ +  ++  + +AE V +S  ++  S  W  +    AA G
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVR-DSVTWNIMIGGYAAIG 285


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/711 (31%), Positives = 376/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+  ++SG  ++A  L+ Q+H +  + P  Y LS+ L+AC   +  A G  +HA   +  
Sbjct: 116 LSGYAQSGLGKEAFRLYSQMHWTAVI-PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +   V N +++LY                                  G    A  VF 
Sbjct: 175 FCSETFVGNALIALY-------------------------------LGFGSFKLAERVFC 203

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            M   D   +N +I+G  + G+ +  + +F EM    +R D  + AS+L+ C   G L+ 
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLHS + K+G S       +L+ +Y  CG++  A  +F    G   + + +N+M+   
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN--LGDRTNVVLWNLMLVAY 321

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
             +  + ++   F  M    + P++ T+  ++  C C     +G Q+H+ ++K+GFE+  
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VS   I MYS  G +D+A  I   L+++D+VSW +MI+ Y Q +    A+  + EMQ  
Sbjct: 382 YVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ PD     S  ++   I+ +     IHA V+++G   +I + N L++ YA+  R ++A
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEA 501

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           + +F  +  ++ ITWN LI+GF  +    Q L  F ++  +  + + +T   A+S+ A +
Sbjct: 502 FSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANL 561

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           + ++ GKQ+HG  +K    S+  + NA+I+LY KCG ++ +  +F+ M  ++ +SWN +I
Sbjct: 562 ADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           ++ +QHG G EA+  F  M+  G +KP+  TF  VL+ACSH GLV++G   F SM N YG
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEG-LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  DH +C++D+LGRAG LD A R ++   I A +  W  L SAC  H N+ +G + A
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E    + YVLLSN YA  G W     +R+++K  G+ K+PG SWI
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 184/664 (27%), Positives = 317/664 (47%), Gaps = 45/664 (6%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA-A 74
           T +E+   L+ SLA      + +  L L V   +SH        L+  L AC    N   
Sbjct: 2   TCREVAASLHRSLAKFIVPDNPEKILSL-VAAKASHHRALGSADLTCALQACRGRGNRWP 60

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
              ++HA ++  GL A   + N ++ LY                                
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLY-------------------------------A 89

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A +VF ++  RD   + AM++G  ++G       L+ +MH   V    Y  +S
Sbjct: 90  KNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSS 149

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C  G L   GR +H+ V K  F     V NALI +Y   G+   A +VF +     
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM--LF 207

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
           CD +++N ++ G A  G  E AL  F +M ++ LRP  +T  S+++AC      + G Q+
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+  +K+G         + + +Y  CG I+ A  IF      ++V WN M+  Y Q +  
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             +   + +MQ+ GI P++FT+  +L +   +G IE+ E IH+    NG  +++ VS  L
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y+K   + +A +I   +  R++++W ++I G++ + F  + L  F E+    + PD 
Sbjct: 388 IDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
             L+ A S+CA I ++R G QIH  V  +   + +S+ N ++ LYA+CG  + +  +F  
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD I+WN LIS + Q    K+A+  F  M   G  K +  TF + +SA ++   +  
Sbjct: 508 IEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAG-AKYNVFTFISAISALANLADIKQ 566

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G ++    V   G     +  + ++ L G+ G +++A+ + +   ++    +W  + ++C
Sbjct: 567 GKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV-SWNTIITSC 624

Query: 668 AAHG 671
           + HG
Sbjct: 625 SQHG 628


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/724 (32%), Positives = 386/724 (53%), Gaps = 49/724 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  ++  +R+  ++DA+ +F ++ S  + KPD ++L   + ACA L +   G  +H
Sbjct: 65  LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A +  L +   V N ++++Y                                K G V+
Sbjct: 125 GMATKMDLVSDVFVGNALIAMY-------------------------------GKCGLVE 153

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM--HKLDVRRDNYSFASVLSV 198
            A +VF+ MP+R+L  +N++I G +ENG+       FREM   +     D  +  +VL V
Sbjct: 154 EAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPV 213

Query: 199 CDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           C AG   +E G  +H L  K G +  + V N+LI MY  C  + +A  +F+  K    + 
Sbjct: 214 C-AGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD--KNDKKNI 270

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSACLCPRVGYQ----V 310
           +S+N M+ G A    V       + M    A ++  E T ++V+  CL  R   Q    +
Sbjct: 271 VSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCL-ERSELQSLKEL 329

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  + + G ++   V+NA I  Y+ CG +  +  +F  +  K + SWN ++  YAQ +  
Sbjct: 330 HGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDP 389

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
           R A+  YL+M   G+ PD FT GSLL +   ++ +   E IH F   NG+  +  +  +L
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S Y    +   A  +F  M  R++++WN +I G+  NG P + +  F ++L   ++P E
Sbjct: 450 LSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYE 509

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
             +     +C+++S+LR GK++H + LK +L   + + +++I +YAK G +  S R+F+ 
Sbjct: 510 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 569

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + EKD  SWN +I+ Y  HG GKEA+  F+ M  +G +KPD  TFT +L ACSHAGLV+D
Sbjct: 570 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG-LKPDDFTFTGILMACSHAGLVED 628

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ M+N +   P  +H +C++D+LGRAG +D+A R+I        S  W +L S+C
Sbjct: 629 GLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSC 688

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGNL LG  +A  LLE E +KP  YVL+SN++A +G W++   +R  +K  G+ K  G
Sbjct: 689 RIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAG 748

Query: 728 CSWI 731
           CSWI
Sbjct: 749 CSWI 752



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/470 (31%), Positives = 259/470 (55%), Gaps = 17/470 (3%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGL 203
           VFDK+  ++L  +NA+++  T N   +  + +F E+  + + + DN++   V+  C AGL
Sbjct: 56  VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC-AGL 114

Query: 204 LE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           L+   G+ +H + TK      V V NALI MY  CG V +A KVFE       + +S+N 
Sbjct: 115 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER--NLVSWNS 172

Query: 262 MMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           ++ G +  G ++E+   FR+MLV   S  P   T V+V+  C        G  VH  A+K
Sbjct: 173 IICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK 232

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA-QRNLGRS-AI 374
            G      V+N+ I MYS C  + EA ++F +  +K+IVSWN+MI  YA + ++ R+  +
Sbjct: 233 LGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYL 292

Query: 375 LAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           L  ++ +   ++ DEFT  ++L        ++ ++ +H + + +G+ +N  V+NA I+AY
Sbjct: 293 LQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAY 352

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            +   +  + ++F  M  + + +WN L+ G+  N  P + L  + ++  S L PD +T+ 
Sbjct: 353 TRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +C+R+ SL +G++IHG+ L+N L     +G ++++LY  CG    +  +F+ M  +
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             +SWN +I+ Y+Q+G   EA++ F+ M   G I+P +     V  ACS 
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDG-IQPYEIAIMCVCGACSQ 521



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 209/413 (50%), Gaps = 23/413 (5%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNA-LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +E GR+LH +V+ S   C   V+N  +ITMY  CG+  D+  VF++ +    +   +N +
Sbjct: 14  IEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK--NLFQWNAI 71

Query: 263 MDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           +         E+A+  F +++ V   +P   T   V+ AC   L   +G  +H  A K  
Sbjct: 72  VSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMD 131

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
             +   V NA I MY  CG ++EA  +F  + E+++VSWN++I  +++    + +  A+ 
Sbjct: 132 LVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFR 191

Query: 379 EM--QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           EM        PD  T  ++L   A    IE    +H      G+   + V+N+LI  Y+K
Sbjct: 192 EMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSK 251

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNG------FPVQGLQHFSELLMSELRPDE 487
              + +A  +F     +NI++WN++I G+          + +Q +Q       ++++ DE
Sbjct: 252 CRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED----AKMKADE 307

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T+   L  C   S L+  K++HGY  ++ L S   + NA I  Y +CG L  S RVF++
Sbjct: 308 FTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDL 367

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           M  K   SWNAL+  YAQ+ + ++A+  +  M D G + PD  T  ++L ACS
Sbjct: 368 MDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG-LDPDWFTIGSLLLACS 419



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 8/220 (3%)

Query: 490 LSVALSSCARISSLRHGKQIHGYV-LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           + V L +C +   +  G+++H  V       +   L   +IT+Y+ CG    S  VF+ +
Sbjct: 1   MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             K+   WNA++SAY ++   ++A+S F  +  V   KPD  T   V+ AC  AGL+D G
Sbjct: 61  RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLG 118

Query: 609 T-RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSA 666
             +I   M      +      + ++ + G+ G ++EA +V   +H+  R+  +W ++   
Sbjct: 119 LGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVF--EHMPERNLVSWNSIICG 176

Query: 667 CAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            + +G L+        +L+  E   P V  L++ +   AG
Sbjct: 177 FSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAG 216


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 243/730 (33%), Positives = 384/730 (52%), Gaps = 51/730 (6%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIH---SSHKLKPDIYSLSTTLAACANL 70
           SN SKEL    N  +  L +  HY++AL  F   H   S+   +P  Y+  + + ACAN 
Sbjct: 118 SNLSKEL--PTNSYIIFLCKQHHYKEALEAF-DFHLKNSNSHFEPSTYT--SLVLACANF 172

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           R+  +  ++H + L++  +    + N ++++Y     +   ++VF  +Q P+V SWT   
Sbjct: 173 RSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWT--- 229

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
                                       +MI+G ++NG  +  I ++ +M +     D  
Sbjct: 230 ----------------------------SMISGYSQNGQANDAIIMYIQMTRSGQFPDQL 261

Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F SV+  C  AG ++ GRQLH+ V KS F   ++  NALI+MY N G +  A  VF   
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC---LCPR 305
                D IS+  M+ G   +G   EAL  FRD+L   + +P+E  F SV SAC   L   
Sbjct: 322 P--TKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELE 379

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G QVH   +K G         +   MY+  G +  A M F +++  DIVSWN +I+ +A
Sbjct: 380 YGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 439

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQ 422
                  AI  + +M  +G+ PD  T+ SLL + G    +     IH+++   G    I 
Sbjct: 440 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEIT 499

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
           V N+L++ Y K   +  A  +F ++S   N+++WN +++  L      +  + + E+  S
Sbjct: 500 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 559

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +PD  T++  L +CA ++SL  G Q+H Y +K+ LI  +S+ N +I +YAKCG L  +
Sbjct: 560 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHA 619

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF+     D +SW++LI  YAQ G G EA++ F+ M ++G ++P++ T+   LSACSH
Sbjct: 620 RDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLG-VQPNEVTYLGALSACSH 678

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GLV++G R++ SM  ++G  P  +H SC++DLL RAG L EAE  I    + A    W 
Sbjct: 679 IGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWK 738

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L +AC  H N+ +    AG +L+ +    +  V+L NI+A+AG WEE A +R+L+K+ G
Sbjct: 739 TLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMG 798

Query: 722 VIKQPGCSWI 731
           V K PG SWI
Sbjct: 799 VQKVPGQSWI 808


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 225/672 (33%), Positives = 361/672 (53%), Gaps = 41/672 (6%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C  LR+AA G Q+  + ++ G +   +  NT++ LY                        
Sbjct: 67  CTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY------------------------ 102

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
               S C   G+V  A ++FD + ++ +  +NA+I G  + G+      LFR+M    + 
Sbjct: 103 ----SIC---GNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLE 155

Query: 187 RDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
               +F SVL  C +   L +G+++H+ V  +GF     +  AL++MY   G++ DA +V
Sbjct: 156 PSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQV 215

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F+    ++ D  ++NVM+ G A  G  E+A   F  M    L+P++++F+S++  C  P 
Sbjct: 216 FDGL--HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPE 273

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G  VHAQ M +G      V+ + I MY++CG I+ A  +F  ++ +D+VSW  MI 
Sbjct: 274 ALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIE 333

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            YA+      A   +  MQ  GI+PD  T+  ++   A S  +     IH+ V I G  T
Sbjct: 334 GYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGT 393

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ VS AL+  YAK   IK A Q+F  M  R++++W+ +I  ++ NG+  +  + F  + 
Sbjct: 394 DLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMK 453

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            S + PD  T    L++C  + +L  G +I+   +K +L+S + LGNA+I + AK G ++
Sbjct: 454 RSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVE 513

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  +F+ M+ +D I+WNA+I  Y+ HG  +EA+  F  M    R +P+  TF  VLSAC
Sbjct: 514 RARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLK-ERFRPNSVTFVGVLSAC 572

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           S AG VD+G R F  ++   G +P      CM+DLLGRAG LDEAE +I S  ++  S  
Sbjct: 573 SRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSI 632

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W +L  AC  HGNL +    A   L  +    +VYV LS++YAAAG+WE  A +R++++ 
Sbjct: 633 WSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMES 692

Query: 720 TGVIKQPGCSWI 731
            G+ K+ GC+WI
Sbjct: 693 RGIRKEQGCTWI 704



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 282/576 (48%), Gaps = 51/576 (8%)

Query: 9   TIAGNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSL 60
           +I GN   ++++        ++  N  +A  ++ GH ++A  LF Q+     L+P I + 
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQM-VDEGLEPSIITF 161

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
            + L AC++     +G ++HA  + AG  +   +   ++S+Y                  
Sbjct: 162 LSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMY------------------ 203

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
                         K G +D A +VFD +  RD+  +N M+ G  ++G  +    LF  M
Sbjct: 204 -------------VKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRM 250

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            ++ ++ +  SF S+L  C     L +G+ +H+    +G    + V  +LI MY  CG++
Sbjct: 251 QQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSI 310

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A +VF+  K  V D +S+ VM++G A  G +E+A   F  M    ++P  +T++ +M+
Sbjct: 311 EGARRVFDNMK--VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMN 368

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC          ++H+Q   +GF     VS A + MY+ CG I +A  +F  +  +D+VS
Sbjct: 369 ACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVS 428

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVF 413
           W+ MI  Y +   G  A   +  M+   I PD  T+ +LL + G +  +++   I+    
Sbjct: 429 WSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAI 488

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +++++ + NALI   AK+  +++A  IF  M  R++ITWN +I G+ L+G   + L 
Sbjct: 489 KADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALY 548

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLY 532
            F  +L    RP+  T    LS+C+R   +  G++   Y+L+   ++  + L   M+ L 
Sbjct: 549 LFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLL 608

Query: 533 AKCGDLD-CSLRVFNMMIEKDTISWNALISAYAQHG 567
            + G+LD   L + +M ++  +  W++L+ A   HG
Sbjct: 609 GRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHG 644



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 195/389 (50%), Gaps = 17/389 (4%)

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T+V +   C   R   +G QV    ++ G +      N  I +YS CG + EA  IF  +
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
           + K +V+WN +I+ YAQ    + A   + +M   G+ P   TF S+L   +S   +   +
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +HA V   G +++ ++  AL+S Y K   +  A Q+F  +  R++ T+N ++ G+  +G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              +  + F  +    L+P++ +    L  C    +L  GK +H   +   L+  + +  
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +Y  CG ++ + RVF+ M  +D +SW  +I  YA++G  ++A   F  MQ+ G I+
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG-IQ 357

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRAGYLDEA 644
           PD+ T+  +++AC+ +  ++    I  S V+  GF    D L  + ++ +  + G + +A
Sbjct: 358 PDRITYMHIMNACAISANLNHAREIH-SQVDIAGF--GTDLLVSTALVHMYAKCGAIKDA 414

Query: 645 ERVINSQHIQARSD--NWWALFSACAAHG 671
            +V ++     R D  +W A+  A   +G
Sbjct: 415 RQVFDA---MPRRDVVSWSAMIGAYVENG 440



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 2/169 (1%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  T       C  +     GKQ+  ++++      +   N +I LY+ CG++  + ++F
Sbjct: 56  DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + +  K  ++WNALI+ YAQ G  KEA + F+ M D G ++P   TF +VL ACS    +
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEG-LEPSIITFLSVLDACSSPAGL 174

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           + G  +   +V   GF+      + ++ +  + G +D+A +V +  HI+
Sbjct: 175 NWGKEVHAQVVT-AGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/725 (31%), Positives = 386/725 (53%), Gaps = 45/725 (6%)

Query: 14   SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
            +NT+  +    N  +      G  ++A+ L  +   S   +  + S  + L  CA  ++ 
Sbjct: 329  TNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK---SKSYELGLNSYCSVLQLCAEKKSL 385

Query: 74   AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
              G ++H+  +  G+     +   ++ +Y N  DLV  +++F +I N  V+ W   +S  
Sbjct: 386  EDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY 445

Query: 134  TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
             K+G+   +                               + LF++M KL V  + Y+F 
Sbjct: 446  AKIGNFRES-------------------------------VSLFKKMQKLGVVGNCYTFT 474

Query: 194  SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             VL    A G ++  +++H  V K GF    +VVN+LI  YF  G V  A  +F+E    
Sbjct: 475  CVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEP 534

Query: 253  VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
              D +S+N M++G    G     L  F  ML+  +     T VSV+ A        +G  
Sbjct: 535  --DVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRA 592

Query: 310  VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
            +H   +K+ F      SN  + MYS CG ++ A  +F ++ +  IVSW + I+ Y +  L
Sbjct: 593  LHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGL 652

Query: 370  GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
               AI  + EMQS G+RPD +T  S++   A S  ++    +H++V  NG+ +N+ V+NA
Sbjct: 653  YSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNA 712

Query: 427  LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
            LI+ YAK   +++A  +F  +  ++I++WNT+I G+  N  P + L+ F ++   + +PD
Sbjct: 713  LINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPD 771

Query: 487  EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            + T++  L +CA +++L  G++IHG++L+    S + +  A++ +YAKCG L  +  +F+
Sbjct: 772  DITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFD 831

Query: 547  MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M+ +KD ISW  +I+ Y  HG G EA+S F  M+  G I+PD+++F+ +L+ACSH+GL++
Sbjct: 832  MIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG-IEPDESSFSVILNACSHSGLLN 890

Query: 607  DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            +G + F+SM N+ G  P  +H +C++DLL R G L +A + I S  I+  +  W  L S 
Sbjct: 891  EGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSG 950

Query: 667  CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
            C  H +++L   +A  + E E D    YV+L+N+YA A  WEE   +R+ +++ G  + P
Sbjct: 951  CRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNP 1010

Query: 727  GCSWI 731
            GCSWI
Sbjct: 1011 GCSWI 1015



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 203/453 (44%), Gaps = 82/453 (18%)

Query: 12   GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
            GN N + E+ +K+          ++A   R G Y DA+ LF ++ S   ++PDIY++++ 
Sbjct: 620  GNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK-GVRPDIYTVTSI 678

Query: 64   LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
            + ACA   +   G  +H+Y ++ G+ +   V N ++++Y     +   + VFS+I   D+
Sbjct: 679  VHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDI 738

Query: 124  YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
             SW                               N MI G ++N   +  + LF +M K 
Sbjct: 739  VSW-------------------------------NTMIGGYSQNSLPNEALELFLDMQK- 766

Query: 184  DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
              + D+ + A VL  C AGL  L+ GR++H  + + G+   + V  AL+ MY  CG +V 
Sbjct: 767  QFKPDDITMACVLPAC-AGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVL 825

Query: 242  ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            A  +F+       D IS+ VM+ G    G   EA+  F +M +A + P E +F  +++AC
Sbjct: 826  AQLLFDMIPKK--DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNAC 883

Query: 302  LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                     H+  +  G++ + S+ N        CG             E  +  +  ++
Sbjct: 884  --------SHSGLLNEGWKFFNSMRN-------ECG------------VEPKLEHYACVV 916

Query: 362  STYAQR-NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGI 417
               A+  NL +    AY  ++S+ I+PD   +G LL+       +++ E +   +F    
Sbjct: 917  DLLARMGNLSK----AYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF-ELE 971

Query: 418  ITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
              N +    L + YA+ E+ ++  ++   M  R
Sbjct: 972  PDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKR 1004


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 242/717 (33%), Positives = 387/717 (53%), Gaps = 46/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +++ HY++AL  F Q+ S H +K    +L++ L+A A+L     G  +HA+A+
Sbjct: 186 NVMISGHAKTAHYEEALAFFHQM-SKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI 244

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G ++  +VA++++++Y              + Q PD                   A +
Sbjct: 245 KQGFESSIYVASSLINMY-------------GKCQMPD------------------DARQ 273

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VFD +  +++ V+NAM+   ++NG+    + LF +M    +  D +++ S+LS C     
Sbjct: 274 VFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEY 333

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GRQLHS + K  F+  + V NALI MY   G + +A K FE       DHIS+N ++
Sbjct: 334 LEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYR--DHISWNAII 391

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G         A   FR M++  + P E++  S++SAC   +V   G Q H  ++K G E
Sbjct: 392 VGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLE 451

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                 ++ I MYS CG I +A   ++ + E+ +VS N +I+ YA +N   S  L + EM
Sbjct: 452 TNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKNTKESINLLH-EM 510

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNER 436
           Q +G++P E TF SL+     S  + +   IH  +   G++   + +  +L+  Y  ++R
Sbjct: 511 QILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQR 570

Query: 437 IKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A  +F   S  ++I+ W  LI+G + N      L  + E+  + + PD+ T    L 
Sbjct: 571 LADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQ 630

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTI 554
           +CA +SSL  G++IH  +            +A++ +YAKCGD+  S++VF  +  +KD I
Sbjct: 631 ACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVI 690

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I  +A++G  K A+  F  M     I PD  TF  VL+ACSHAG V +G +IFD 
Sbjct: 691 SWNSMIVGFAKNGYAKCALKVFDEMTQ-SCITPDDVTFLGVLTACSHAGWVYEGRQIFDV 749

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MVN YG  P  DH +CM+DLLGR G+L EAE  I+   ++  +  W  L  AC  HG+ +
Sbjct: 750 MVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEK 809

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+  A  L+E E    S YVLLSN+YAA+G W+EA ++R  + +  + K PGCSWI
Sbjct: 810 RGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWI 866



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 190/715 (26%), Positives = 326/715 (45%), Gaps = 72/715 (10%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           R+    + G  + S E +L+   S  N   SGH                  PD ++ + T
Sbjct: 14  RQWNWRVQGTKHYSSERVLQFYASFMN---SGH-----------------SPDQFTFAVT 53

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+ACA L+N   G  +H+  +++GL++       ++ LY     L   + +F+    P +
Sbjct: 54  LSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHL 113

Query: 124 Y--SWT----------------------------------TFLSACTKMGHVDYACEVFD 147
           +  SWT                                  T L+A   +G +D AC++F 
Sbjct: 114 HTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQ 173

Query: 148 KM--PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLL 204
           +M  P R++  +N MI+G  +  + +  +  F +M K  V+    + ASVLS +     L
Sbjct: 174 QMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAAL 233

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G  +H+   K GF   + V ++LI MY  C    DA +VF+       + I +N M+ 
Sbjct: 234 NHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQK--NMIVWNAMLG 291

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEA 321
             +  G +   +  F DM+   + P E T+ S++S C C     VG Q+H+  +K  F +
Sbjct: 292 VYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTS 351

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V+NA I MY+  G + EA   F  +  +D +SWN +I  Y Q  +   A   +  M 
Sbjct: 352 NLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMI 411

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             GI PDE +  S+L++ G I+++E     H      G+ TN+   ++LI  Y+K   IK
Sbjct: 412 LDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIK 471

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A++ + +M  R++++ N LI G+ L     + +    E+ +  L+P E T +  +  C 
Sbjct: 472 DAHKTYSSMPERSVVSVNALIAGYALKNTK-ESINLLHEMQILGLKPSEITFASLIDVCK 530

Query: 499 RISSLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISW 556
             + +  G QIH  ++K  L+     LG +++ +Y     L D ++        K  + W
Sbjct: 531 GSAKVILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMW 590

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            ALIS + Q+     A++ ++ M+D   I PDQATF  VL AC+    + DG  I  S++
Sbjct: 591 TALISGHIQNECSDVALNLYREMRD-NNISPDQATFVTVLQACALLSSLHDGREI-HSLI 648

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
              GF   E   S ++D+  + G +  + +V      +    +W ++    A +G
Sbjct: 649 FHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNG 703



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 17/261 (6%)

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           LQ ++  + S   PD++T +V LS+CA++ +L  G+ +H  V+K+ L S      A+I L
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHL 91

Query: 532 YAKCGDLDCSLRVFNM--MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           YAKC  L C+  +F         T+SW ALIS Y Q G   EA+  F  M++     PDQ
Sbjct: 92  YAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSA--VPDQ 149

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERV 647
                VL+A    G +DD  ++F  M      IP  + ++   M+    +  + +EA   
Sbjct: 150 VALVTVLNAYISLGKLDDACQLFQQMP-----IPIRNVVAWNVMISGHAKTAHYEEALAF 204

Query: 648 IN--SQH-IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL--LSNIYA 702
            +  S+H +++      ++ SA A+   L  G ++    + ++  + S+YV   L N+Y 
Sbjct: 205 FHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAI-KQGFESSIYVASSLINMYG 263

Query: 703 AAGLWEEAANIRELLKRTGVI 723
              + ++A  + + + +  +I
Sbjct: 264 KCQMPDDARQVFDAISQKNMI 284


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 226/626 (36%), Positives = 342/626 (54%), Gaps = 17/626 (2%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
            P ++     L    K G  D A ++FD+MP R++  +N++I+G T+ G+    + LF+E
Sbjct: 51  KPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKE 110

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
               D+R D ++F++ LSVC   L L  GR +H+L+T SG    V + N+LI MY  CG 
Sbjct: 111 ARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGR 170

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A  VFE A     D +S+N ++ G   +G  +E L     ML   L  +     S +
Sbjct: 171 IDWARLVFESADEL--DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSAL 228

Query: 299 SAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            AC          G  +H  A+K G +    V  A +  Y+  G +++A  IF  + + +
Sbjct: 229 KACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPN 288

Query: 354 IVSWNTMISTYAQ-----RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
           +V +N MI+ + Q           A+  + EMQS G++P EFTF S+L +   IE  E  
Sbjct: 289 VVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECG 348

Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             IHA +F   + ++  + NAL+  Y+ +  I+   + FH+    ++++W +LI G + N
Sbjct: 349 KQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQN 408

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G    GL  F ELL S  +PDE+T+S+ LS+CA +++++ G+QIH Y +K  + +   + 
Sbjct: 409 GQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQ 468

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N+ I +YAKCGD+D +   F      D +SW+ +IS+ AQHG  KEAV  F+ M+  G I
Sbjct: 469 NSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG-I 527

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            P+  TF  VL ACSH GLV++G R F+ M  D+G  P   H +C++DLLGRAG L EAE
Sbjct: 528 APNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 587

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             I     +     W +L SAC  H     G+ +A  ++E E +  + YVLL NIY  AG
Sbjct: 588 SFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAG 647

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
           +   A  IR L+K  GV K+PG SWI
Sbjct: 648 IQMPATEIRNLMKDRGVKKEPGLSWI 673



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/549 (27%), Positives = 260/549 (47%), Gaps = 29/549 (5%)

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            G L  G+  H  + K+ F   + ++N L+ MY  CG    A K+F+       + +S+N
Sbjct: 32  TGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKR--NVVSWN 89

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            ++ G   +G   E +  F++  ++ LR  + TF + +S C   L  R+G  +HA    S
Sbjct: 90  SLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVS 149

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G      ++N+ I MY  CG+ID A ++F    E D VSWN++I+ Y +       +   
Sbjct: 150 GLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLL 209

Query: 378 LEMQSVGIRPDEFTFGSLLASSG-----FIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           ++M   G+  + +  GS L + G      IE  +M+H      G+  ++ V  AL+  YA
Sbjct: 210 VKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYA 269

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFL-----LNGFPVQGLQHFSELLMSELRPDE 487
           K   ++ A +IF  M   N++ +N +I GFL      + F  + +  F E+    ++P E
Sbjct: 270 KIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSE 329

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T S  L +C+ I +   GKQIH  + K NL S   +GNA++ LY+  G ++  L+ F+ 
Sbjct: 330 FTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHS 389

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
             + D +SW +LI  + Q+G+ +  ++ F  +   GR KPD+ T + +LSAC++   V  
Sbjct: 390 TPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR-KPDEFTISIMLSACANLAAVKS 448

Query: 608 GTRIFDSMVND--YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           G +I    +      F   ++   CM     + G +D A              +W  + S
Sbjct: 449 GEQIHAYAIKTGIGNFTIIQNSQICM---YAKCGDIDSANMTFKETK-NPDIVSWSVMIS 504

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKR---- 719
           + A HG  +   +    L++     P+    L  + A +  GL EE     E++K+    
Sbjct: 505 SNAQHGCAKEA-VDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGI 563

Query: 720 TGVIKQPGC 728
           T  +K   C
Sbjct: 564 TPNVKHSAC 572



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 146/629 (23%), Positives = 272/629 (43%), Gaps = 62/629 (9%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G ++ +K+L  ++        N  ++  ++ G Y + ++LF +   S  L+ D ++ S  
Sbjct: 68  GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMS-DLRLDKFTFSNA 126

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+ C    +   G  +HA    +GL     + N+++ +Y                     
Sbjct: 127 LSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMY--------------------- 165

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                      K G +D+A  VF+   + D   +N++I G    G  D  + L  +M + 
Sbjct: 166 ----------CKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRH 215

Query: 184 DVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            +  ++Y+  S L  C +     +E G+ LH    K G    V V  AL+  Y   G++ 
Sbjct: 216 GLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLE 275

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRV-----EEALIRFRDMLVASLRPSELTFV 295
           DA K+F+       + + YN M+ G   +  +      EA+  F +M    ++PSE TF 
Sbjct: 276 DATKIFKLMPDP--NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFS 333

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S++ AC        G Q+HAQ  K   ++   + NA + +YS  G I++    F    + 
Sbjct: 334 SILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKL 393

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIH 409
           D+VSW ++I  + Q       +  + E+   G +PDEFT   +L++   +  V   E IH
Sbjct: 394 DVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIH 453

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A+    GI     + N+ I  YAK   I  A   F      +I++W+ +I+    +G   
Sbjct: 454 AYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAK 513

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-M 528
           + +  F  +  S + P+  T    L +C+    +  G +    + K++ I+     +A +
Sbjct: 514 EAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACI 573

Query: 529 ITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           + L  + G L +    + +   E D + W +L+SA   H   K   +  +  + V  ++P
Sbjct: 574 VDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVH---KATDTGKRVAERVIELEP 630

Query: 588 D-QATFTAVLSACSHAGLVDDGTRIFDSM 615
           +  A++  + +  + AG+    T I + M
Sbjct: 631 EAAASYVLLYNIYNDAGIQMPATEIRNLM 659



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 17/201 (8%)

Query: 485 PDEYTLSVALSSCA---------RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
           P  Y L + L S           R  SL HGK  H +++K      + L N ++ +Y KC
Sbjct: 8   PQPYYLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC 67

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G+ D + ++F+ M +++ +SWN+LIS Y Q G   E ++ FK  + +  ++ D+ TF+  
Sbjct: 68  GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEAR-MSDLRLDKFTFSNA 126

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LS C     +  G R+  +++   G        + ++D+  + G +D A  V  S   + 
Sbjct: 127 LSVCGRTLDLRLG-RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-EL 184

Query: 656 RSDNWWALFSACAAHGNLRLG 676
            S +W +L +     G +R+G
Sbjct: 185 DSVSWNSLIA-----GYVRIG 200


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 225/711 (31%), Positives = 374/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+  ++ G  ++A  L+ Q+H +  + P  Y LS+ L+AC   +  A G  +HA   +  
Sbjct: 116 LSGYAQRGLGKEAFRLYSQMHWTAVI-PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA 174

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +   V N +++LY                                  G    A  VF 
Sbjct: 175 FCSETFVGNALIALY-------------------------------LGFGSFKLAERVFC 203

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            M   D   +N +I+G  + G+ +  + +F EM    +R D  + AS+L+ C   G L+ 
Sbjct: 204 DMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQK 263

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLHS + K+G S       +L+ +Y  CG++  A  +F    G   + + +N+M+   
Sbjct: 264 GKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN--LGDRTNVVLWNLMLVAY 321

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
             +  + ++   F  M    + P++ T+  ++  C C     +G Q+H+ ++K+GFE+  
Sbjct: 322 GQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDM 381

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VS   I MYS    +D+A  I   L+++D+VSW +MI+ Y Q +    A+  + EMQ  
Sbjct: 382 YVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDC 441

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ PD     S  ++   I+ +     IHA V+++G   +I + N L++ YA+  R ++A
Sbjct: 442 GVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEA 501

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           + +F  +  ++ ITWN LI+GF  +    Q L  F ++  +  + + +T   A+S+ A +
Sbjct: 502 FSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANL 561

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           + ++ GKQ+HG  +K    S+  + NA+I+LY KCG ++ +  +F+ M  ++ +SWN +I
Sbjct: 562 ADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTII 621

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           ++ +QHG G EA+  F  M+  G +KP+  TF  VL+ACSH GLV++G   F SM N YG
Sbjct: 622 TSCSQHGRGLEALDLFDQMKQEG-LKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  DH +C++D+LGRAG LD A R ++   I A +  W  L SAC  H N+ +G + A
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E    + YVLLSN YA  G W     +R+++K  G+ K+PG SWI
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 183/664 (27%), Positives = 316/664 (47%), Gaps = 45/664 (6%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA-A 74
           T +E+   L+ SLA      + +  L L V   +SH        L+  L AC    N   
Sbjct: 2   TCREVAASLHRSLAKFIVPDNPEKILSL-VAAKASHHRALGSADLTCALQACRGRGNRWP 60

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
              ++HA ++  GL A   + N ++ LY                                
Sbjct: 61  LVLEIHATSVVRGLGADRLIGNLLIDLY-------------------------------A 89

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A +VF ++  RD   + AM++G  + G       L+ +MH   V    Y  +S
Sbjct: 90  KNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSS 149

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C  G L   GR +H+ V K  F     V NALI +Y   G+   A +VF +     
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDM--LF 207

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
           CD +++N ++ G A  G  E AL  F +M ++ LRP  +T  S+++AC      + G Q+
Sbjct: 208 CDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+  +K+G         + + +Y  CG I+ A  IF      ++V WN M+  Y Q +  
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             +   + +MQ+ GI P++FT+  +L +   +G IE+ E IH+    NG  +++ VS  L
Sbjct: 328 AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y+K   + +A +I   +  R++++W ++I G++ + F  + L  F E+    + PD 
Sbjct: 388 IDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
             L+ A S+CA I ++R G QIH  V  +   + +S+ N ++ LYA+CG  + +  +F  
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD I+WN LIS + Q    ++A+  F  M   G  K +  TF + +SA ++   +  
Sbjct: 508 IDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAG-AKYNVFTFISAISALANLADIKQ 566

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G ++    V   G     +  + ++ L G+ G +++A+ + +   ++    +W  + ++C
Sbjct: 567 GKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV-SWNTIITSC 624

Query: 668 AAHG 671
           + HG
Sbjct: 625 SQHG 628


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/624 (34%), Positives = 343/624 (54%), Gaps = 15/624 (2%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I   D+      L    K GH+  A  +FDKM  +D   +  +I+G          + LF
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 178 REMH-KLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           + M  +  +R D +  +     C  GL   + +G  LH    K+G    V V +AL+ MY
Sbjct: 104 KNMRVESGLRIDPFILSLAHKAC--GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMY 161

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G + +  +VF E    + + +S+  ++ GL   G  +EAL+ F +M  + +     T
Sbjct: 162 TKNGKIFEGRRVFHEMP--MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYT 219

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F   + AC        G ++HAQAMK GF+  + V+N   TMY+ CGK++    +F ++ 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
            +D+VSW T+I+T  Q      A+ A++ M+   + P+E+TF +++   A+   IE  E 
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA +   G+  ++ V N++++ YAK  ++  +  IFH M+ R+I++W+T+I G+   G 
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGH 399

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             +  +  S + M   +P E+ L+  LS+C  ++ L HGKQ+H YVL   L     + +A
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSA 459

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y KCG ++ + R+F+     D +SW A+I+ YA+HG  +E +  F+ +  VG ++P
Sbjct: 460 LINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRP 518

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  VLSACSHAGLVD G R F++M   Y   P+++H  CM+DLL RAG L +AE +
Sbjct: 519 DSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHM 578

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +         W  L  AC  HG++  GR  A  +L+ E +    ++ L+NIYA+ G W
Sbjct: 579 IEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKW 638

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
            EAA+IR+L+K  GVIK+PG SWI
Sbjct: 639 REAADIRKLMKSKGVIKEPGWSWI 662



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 263/542 (48%), Gaps = 48/542 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF  +     L+ D + LS    AC    +  +G  LH YA++ GL     V + +
Sbjct: 98  EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y     +   +RVF E+   +V SWT                               
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWT------------------------------- 186

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           A+ITG    GY    +  F EM +  V  D+Y+FA  L  C D+G L +GR++H+   K 
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V N L TMY  CG +     +FE  K  + D +S+  ++  L  +G+ E A+ 
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFE--KMSMRDVVSWTTIITTLVQMGQEECAVQ 304

Query: 278 RFRDMLVASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F  M  + + P+E TF +V+S C    R+  G Q+HA  +  G  A  SV N+ +TMY+
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA--ILAYLEMQSVGIRPDEFTF 392
            CG++  + +IF  +  +DIVSW+T+I+ Y+Q      A  +L+++ M+  G +P EF  
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRME--GPKPTEFAL 422

Query: 393 GSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            S+L++ G + ++E    +HA+V   G+     V +ALI+ Y K   I++A +IF     
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            +I++W  +ING+  +G+  + +  F ++    LRPD  T    LS+C+    +  G + 
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRY 542

Query: 510 HGYVLKNNLI--SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
              + K   I  SK   G  MI L  + G L D    +  M   +D + W+ L+ A   H
Sbjct: 543 FNAMSKKYQISPSKEHYG-CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601

Query: 567 GE 568
           G+
Sbjct: 602 GD 603



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 226/470 (48%), Gaps = 49/470 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L R+G+ ++AL  F ++  S +++ D Y+ +  L ACA+     +G ++HA A++ G
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRS-RVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VANT+ ++Y     L     +F ++   DV SWTT ++   +MG  + A + F 
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           +M +                                DV  + Y+FA+V+S C +   +E+
Sbjct: 308 RMRES-------------------------------DVSPNEYTFAAVISGCANLARIEW 336

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLH+L+   G +  +SV N+++TMY  CG +  +  +F E      D +S++ ++ G 
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR--DIVSWSTIIAGY 394

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
           +  G V EA      M +   +P+E    SV+SAC    +   G Q+HA  +  G E   
Sbjct: 395 SQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I MY  CG I+EA  IF   +  DIVSW  MI+ YA+    R  I  + ++  V
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV 514

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERI 437
           G+RPD  TF  +L++     +V++   F + N +    Q+S +      +I    +  R+
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDL--GFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRL 572

Query: 438 KQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
             A  +   M   R+ + W+TL+    ++G   +G +    +L  +L P+
Sbjct: 573 SDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL--QLEPN 620


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 230/734 (31%), Positives = 389/734 (52%), Gaps = 49/734 (6%)

Query: 6   ITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLA 65
           ++AT++    T   + +  N  +      G  ++A+ L  +   S + + ++ +  + L 
Sbjct: 11  VSATLS--ETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSR---SQRSELELNTYCSVLQ 65

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
            CA L++   G ++H+     G+     +   ++ +Y N  DLV  +R+F  I N  ++ 
Sbjct: 66  LCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFL 125

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W   +S   K+G+                              Y +  +GLF +M +L +
Sbjct: 126 WNLLMSEYAKIGN------------------------------YRE-SVGLFEKMQELGI 154

Query: 186 RRDNYSFASVLS--VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           R D+Y+F  VL      A + E  R +H  V K GF    +VVN+LI  YF CG V  A 
Sbjct: 155 RGDSYTFTCVLKGFAASAKVRECKR-VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESAR 213

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
            +F+E      D +S+N M+ G    G     L  F  ML   +     T V+V+ AC  
Sbjct: 214 ILFDELSDR--DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACAN 271

Query: 304 P---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
                +G  +HA  +K+GF      +N  + MYS CG ++ A  +F ++ E  IVSW ++
Sbjct: 272 VGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSI 331

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           I+ + +  L   AI  + EMQS G+RPD +   S++   A S  ++    +H  +  N +
Sbjct: 332 IAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNM 391

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +N+ VSNAL++ YAK   +++A  IF  +  +NI++WNT+I G+  N  P + LQ F +
Sbjct: 392 GSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLD 451

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
            +  +L+PD+ T++  L +CA +++L  G++IHG++L+    S + +  A++ +Y KCG 
Sbjct: 452 -MQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGL 510

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  + ++F+M+ +KD I W  +I+ Y  HG GKEA+S F+ M+  G I+P++++FT++L 
Sbjct: 511 LVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAG-IEPEESSFTSILY 569

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC+H+GL+ +G ++FDSM ++    P  +H +CM+DLL R+G L  A + I +  I+  +
Sbjct: 570 ACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDA 629

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W AL S C  H ++ L   +A  + E E +    YVLL+N+YA A  WEE   I+  +
Sbjct: 630 AIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRI 689

Query: 718 KRTGVIKQPGCSWI 731
            + G+    GCSWI
Sbjct: 690 SKGGLKNDQGCSWI 703


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/624 (34%), Positives = 342/624 (54%), Gaps = 15/624 (2%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I   D+      L    K GH+  A  +FDKM  +D   +  +I+G          + LF
Sbjct: 44  ISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLF 103

Query: 178 REMH-KLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           + M  +  +R D +  +     C  GL   + +G  LH    K+G    V V +AL+ MY
Sbjct: 104 KNMRVESGLRIDPFILSLAHKAC--GLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMY 161

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G + +  +VF E    + + +S+  ++ GL   G  +EAL+ F +M  + +     T
Sbjct: 162 TKNGKIFEGRRVFHEMP--MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYT 219

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F   + AC        G ++HAQAMK GF+  + V+N   TMY+ CGK++    +F ++ 
Sbjct: 220 FAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMS 279

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
            +D+VSW T+I+T  Q      A+ A++ M+   + P+E+TF +++   A+   IE  E 
Sbjct: 280 MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQ 339

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA +   G+  ++ V N++++ YAK  ++  +  IFH M+ R+I++W+T+I G+   G 
Sbjct: 340 LHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGH 399

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             +  +  S + M   +P E+ L+  LS+C  ++ L HGKQ+H YVL   L     + +A
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSA 459

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y KCG ++ + R+F+     D +SW A+I+ YA+HG  +E +  F+ +  VG ++P
Sbjct: 460 LINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVG-LRP 518

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  VLSACSHAGLVD G   F++M   Y   P+++H  CM+DLL RAG L +AE +
Sbjct: 519 DSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHM 578

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +         W  L  AC  HG++  GR  A  +L+ E +    ++ L+NIYA+ G W
Sbjct: 579 IEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKW 638

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
            EAA+IR+L+K  GVIK+PG SWI
Sbjct: 639 REAADIRKLMKSKGVIKEPGWSWI 662



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/542 (30%), Positives = 261/542 (48%), Gaps = 48/542 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF  +     L+ D + LS    AC    +  +G  LH YA++ GL     V + +
Sbjct: 98  EALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSAL 157

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y     +   +RVF E+   +V SWT                               
Sbjct: 158 LDMYTKNGKIFEGRRVFHEMPMRNVVSWT------------------------------- 186

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           A+ITG    GY    +  F EM +  V  D+Y+FA  L  C D+G L +GR++H+   K 
Sbjct: 187 AIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKK 246

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V N L TMY  CG +     +FE  K  + D +S+  ++  L  +G+ E A+ 
Sbjct: 247 GFDVSSFVANTLATMYNKCGKLEYGLTLFE--KMSMRDVVSWTTIITTLVQMGQEECAVQ 304

Query: 278 RFRDMLVASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F  M  + + P+E TF +V+S C    R+  G Q+HA  +  G  A  SV N+ +TMY+
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA--ILAYLEMQSVGIRPDEFTF 392
            CG++  + +IF  +  +DIVSW+T+I+ Y Q      A  +L+++ M+  G +P EF  
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRME--GPKPTEFAL 422

Query: 393 GSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            S+L++ G + ++E    +HA+V   G+     V +ALI+ Y K   I++A +IF     
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN 482

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            +I++W  +ING+  +G+  + +  F ++    LRPD  T    LS+C+    +  G   
Sbjct: 483 DDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHY 542

Query: 510 HGYVLKNNLI--SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
              + K   I  SK   G  MI L  + G L D    +  M   +D + W+ L+ A   H
Sbjct: 543 FNAMSKKYQISPSKEHYG-CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601

Query: 567 GE 568
           G+
Sbjct: 602 GD 603



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 225/470 (47%), Gaps = 49/470 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L R+G+ ++AL  F ++  S +++ D Y+ +  L ACA+     +G ++HA A++ G
Sbjct: 189 ITGLVRAGYNKEALVYFSEMWRS-RVEYDSYTFAIALKACADSGALNYGREIHAQAMKKG 247

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VANT+ ++Y     L     +F ++   DV SWTT ++   +MG  + A + F 
Sbjct: 248 FDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFI 307

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           +M +                                DV  + Y+FA+V+S C +   +E+
Sbjct: 308 RMRES-------------------------------DVSPNEYTFAAVISGCANLARIEW 336

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLH+L+   G +  +SV N+++TMY  CG +  +  +F E      D +S++ ++ G 
Sbjct: 337 GEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRR--DIVSWSTIIAGY 394

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
              G V EA      M +   +P+E    SV+SAC    +   G Q+HA  +  G E   
Sbjct: 395 XQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA 454

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I MY  CG I+EA  IF   +  DIVSW  MI+ YA+    R  I  + ++  V
Sbjct: 455 MVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV 514

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERI 437
           G+RPD  TF  +L++     +V++   F + N +    Q+S +      +I    +  R+
Sbjct: 515 GLRPDSVTFIGVLSACSHAGLVDL--GFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRL 572

Query: 438 KQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
             A  +   M   R+ + W+TL+    ++G   +G +    +L  +L P+
Sbjct: 573 SDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERIL--QLEPN 620


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 373/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++    +A+ LF  ++    + P  Y+ S+ L+AC  + +   G QLH   L+ G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N ++SLY +  +L+S + +FS                               
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFS------------------------------- 347

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  RD   YN +I G ++ GY +  + LF+ MH   +  D+ + AS++  C A G L  
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH+  TK GF+    +  AL+ +Y  C ++  A   F E +  V + + +NVM+   
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE--VENVVLWNVMLVAY 465

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
             +  +  +   FR M +  + P++ T+ S++  C+      +G Q+H+Q +K+ F+   
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +  I MY+  GK+D A  I  R   KD+VSW TMI+ Y Q N    A+  + +M   
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GIR DE    + +++   ++ +   + IHA   ++G  +++   NAL++ Y++  +I+++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           Y  F      + I WN L++GF  +G   + L+ F  +    +  + +T   A+ + +  
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++++ GKQ+H  + K    S+  + NA+I++YAKCG +  + + F  +  K+ +SWNA+I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           +AY++HG G EA+  F  M     ++P+  T   VLSACSH GLVD G   F+SM ++YG
Sbjct: 766 NAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H  C++D+L RAG L  A+  I    I+  +  W  L SAC  H N+ +G   A
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E +  + YVLLSN+YA +  W+     R+ +K  GV K+PG SWI
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 187/645 (28%), Positives = 318/645 (49%), Gaps = 53/645 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVAN 96
           +   LFV++  S  + P+  + S  L AC    + AF    Q+HA  L  GL+    V N
Sbjct: 169 EVFGLFVRM-VSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCN 226

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ LY                               ++ G VD A  VFD +  +D   
Sbjct: 227 PLIDLY-------------------------------SRNGFVDLARRVFDGLRLKDHSS 255

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           + AMI+G ++N  E   I LF +M+ L +    Y+F+SVLS C     LE G QLH LV 
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K GFS    V NAL+++YF+ GN++ A  +F        D ++YN +++GL+  G  E+A
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR--DAVTYNTLINGLSQCGYGEKA 373

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F+ M +  L P   T  S++ AC        G Q+HA   K GF +   +  A + +
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ C  I+ A   F   + +++V WN M+  Y   +  R++   + +MQ   I P+++T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493

Query: 393 GSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            S+L +    G +E+ E IH+ +       N  V + LI  YAK  ++  A+ I    + 
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++++W T+I G+    F  + L  F ++L   +R DE  L+ A+S+CA + +L+ G+QI
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H     +   S +   NA++TLY++CG ++ S   F      D I+WNAL+S + Q G  
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           +EA+  F  M   G I  +  TF + + A S    +  G ++  +++   G+    +  +
Sbjct: 674 EEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCN 731

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHG 671
            ++ +  + G + +AE+    Q ++  + N   W A+ +A + HG
Sbjct: 732 ALISMYAKCGSISDAEK----QFLEVSTKNEVSWNAIINAYSKHG 772



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 169/597 (28%), Positives = 286/597 (47%), Gaps = 24/597 (4%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A +VFD+MP+R +  +N MI             GLF  M   +V  +  +F+ VL  C  
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198

Query: 202 GLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           G + F    Q+H+ +   G      V N LI +Y   G V  A +VF+  +  + DH S+
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSW 256

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK 316
             M+ GL+      EA+  F DM V  + P+   F SV+SAC       +G Q+H   +K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            GF + T V NA +++Y   G +  A  IF+ + ++D V++NT+I+  +Q   G  A+  
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  M   G+ PD  T  SL+   ++ G +   + +HA+    G  +N ++  AL++ YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              I+ A   F      N++ WN ++  + L        + F ++ + E+ P++YT    
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +C R+  L  G+QIH  ++K N      + + +I +YAK G LD +  +      KD 
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW  +I+ Y Q+    +A++ F+ M D G I+ D+   T  +SAC+    + +G +I  
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHA 615

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHG 671
                 GF       + ++ L  R G ++E+   +  +  +A  DN  W AL S     G
Sbjct: 616 QACVS-GFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEA-GDNIAWNALVSGFQQSG 671

Query: 672 NLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           N     R+   + + RE    + +   S + AA+    E AN+++  +   VI + G
Sbjct: 672 NNEEALRVF--VRMNREGIDNNNFTFGSAVKAAS----ETANMKQGKQVHAVITKTG 722



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 232/473 (49%), Gaps = 13/473 (2%)

Query: 185 VRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           +R ++ +   +L  C    G L+ GR+LHS + K G      +   L   Y   G++  A
Sbjct: 80  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            KVF+E         ++N M+  LAS   + E    F  M+  ++ P+E TF  V+ AC 
Sbjct: 140 FKVFDEMPERTI--FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197

Query: 303 CPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              V +    Q+HA+ +  G    T V N  I +YS  G +D A  +F  L+ KD  SW 
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN 415
            MIS  ++      AI  + +M  +GI P  + F S+L++   IE +E+   +H  V   
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  ++  V NAL+S Y     +  A  IF NMS R+ +T+NTLING    G+  + ++ F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + +  L PD  TL+  + +C+   +L  G+Q+H Y  K    S   +  A++ LYAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
            D++ +L  F     ++ + WN ++ AY    + + +   F+ MQ +  I P+Q T+ ++
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSI 496

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           L  C   G ++ G +I   ++    F       S ++D+  + G LD A  ++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +SG+ ++AL +FV+++    +  + ++  + + A +   N   G Q+HA   
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 719

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V N ++S+Y     +   ++ F E+   +  SW   ++A +K G    A +
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779

Query: 145 VFDKMPDRDLPVYNAMITG----CTENGYEDIGIGLFREMH 181
            FD+M   ++   +  + G    C+  G  D GI  F  M+
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 231/731 (31%), Positives = 392/731 (53%), Gaps = 49/731 (6%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
           N++  K L L  N  L+   R+  ++DA+ +FV++ S  +  PD ++L   + AC  + +
Sbjct: 153 NASRRKNLFL-WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYD 211

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
              G  +H +AL+  + +   V N ++++Y                              
Sbjct: 212 VRLGEAVHGFALKTKVLSDVFVGNALIAMY------------------------------ 241

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNY 190
             K G V+ A +VFDKMP R+L  +N+++  C ENG  +   GLF+ +   D  +  D  
Sbjct: 242 -GKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVA 300

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +  +V+ +C   G +  G   H L  K G    + V ++L+ MY  CG + +A  +F+  
Sbjct: 301 TMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTN 360

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCPRVGY 308
           +  V   IS+N M+ G +       A    R M +   ++ +E+T ++V+  C    + +
Sbjct: 361 EKNV---ISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCE-EEIQF 416

Query: 309 ----QVHAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
               ++H  A++ GF ++   V+NA +  Y+ CG +  A  +F  ++ K + SWN +I  
Sbjct: 417 LKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGG 476

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN 420
           + Q    R A+  YL M+  G+ PD FT  SLL++   ++ +   + IH  +  NG   +
Sbjct: 477 HVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELD 536

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
             +  +L+S Y +  +I  A   F NM  +N++ WNT+INGF  N FP   L  F ++L 
Sbjct: 537 EFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S++ PDE ++  AL +C+++S+LR GK++H + +K++L     +  ++I +YAKCG ++ 
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQ 656

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           S  +F+ +  K  ++WN LI+ Y  HG G++A+  FK+MQ+ G  +PD  TF A+L+AC+
Sbjct: 657 SQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAG-FRPDSVTFIALLTACN 715

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           HAGLV +G      M + +G  P  +H +C++D+LGRAG L+EA  ++N    +  S  W
Sbjct: 716 HAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIW 775

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            +L S+C  + +L +G  +A  LLE   DK   YVL+SN YA  G W+E   +R+ +K  
Sbjct: 776 SSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEI 835

Query: 721 GVIKQPGCSWI 731
           G+ K  GCSWI
Sbjct: 836 GLQKDAGCSWI 846



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 179/668 (26%), Positives = 313/668 (46%), Gaps = 67/668 (10%)

Query: 30  NLSRSGHYQDALHLFVQ-----IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NL  +G+   A + F+Q     + SS   KP    +   L  C   +N   G ++H +  
Sbjct: 63  NLCNTGNLNQAFN-FLQSNLNDVVSSSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNF-- 118

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              +   PH  N          D+V + R+             T  S C        +C 
Sbjct: 119 ---ISTSPHFQN----------DVVLITRL------------VTMYSICDSPYD---SCL 150

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGL 203
           VF+    ++L ++NA+++G   N      + +F EM  L +   DN++   V+  C  G+
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC-VGV 209

Query: 204 --LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             +  G  +H    K+     V V NALI MY   G V  A KVF++      + +S+N 
Sbjct: 210 YDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQR--NLVSWNS 267

Query: 262 MMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           +M      G  EE+   F+ +L     L P   T V+V+  C      R+G   H  A+K
Sbjct: 268 VMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALK 327

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G      V+++ + MYS CG + EA ++F    EK+++SWN+MI  Y++    R A   
Sbjct: 328 LGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFEL 386

Query: 377 YLEMQ-SVGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQ-VSNALISA 430
             +MQ    ++ +E T  ++L        F+++ E IH +   +G I + + V+NA ++ 
Sbjct: 387 LRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE-IHGYALRHGFIQSDELVANAFVAG 445

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   +  A  +F  M  + + +WN LI G + NGFP + L  +  +  S L PD +T+
Sbjct: 446 YAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTI 505

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LS+CAR+ SL  GK+IHG +L+N       +  ++++LY +CG +  +   F+ M E
Sbjct: 506 ASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEE 565

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K+ + WN +I+ ++Q+    +A+  F  M    +I PD+ +    L ACS    +  G  
Sbjct: 566 KNLVCWNTMINGFSQNEFPFDALDMFHQMLS-SKIWPDEISIIGALGACSQVSALRLGKE 624

Query: 611 I----FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +      S + ++ F+        ++D+  + G +++++ + +  H++     W  L + 
Sbjct: 625 LHCFAVKSHLTEHSFVTCS-----LIDMYAKCGCMEQSQNIFDRVHLKGEV-TWNVLITG 678

Query: 667 CAAHGNLR 674
              HG+ R
Sbjct: 679 YGIHGHGR 686


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 373/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++    +A+ LF  ++    + P  Y+ S+ L+AC  + +   G QLH   L+ G
Sbjct: 220 ISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 278

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N ++SLY +  +L+S + +FS                               
Sbjct: 279 FSSDTYVCNALVSLYFHLGNLISAEHIFS------------------------------- 307

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  RD   YN +I G ++ GY +  + LF+ MH   +  D+ + AS++  C A G L  
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 367

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH+  TK GF+    +  AL+ +Y  C ++  A   F E +  V + + +NVM+   
Sbjct: 368 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE--VENVVLWNVMLVAY 425

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
             +  +  +   FR M +  + P++ T+ S++  C+      +G Q+H+Q +K+ F+   
Sbjct: 426 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 485

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +  I MY+  GK+D A  I  R   KD+VSW TMI+ Y Q N    A+  + +M   
Sbjct: 486 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 545

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GIR DE    + +++   ++ +   + IHA   ++G  +++   NAL++ Y++  +I+++
Sbjct: 546 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 605

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           Y  F      + I WN L++GF  +G   + L+ F  +    +  + +T   A+ + +  
Sbjct: 606 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 665

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++++ GKQ+H  + K    S+  + NA+I++YAKCG +  + + F  +  K+ +SWNA+I
Sbjct: 666 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 725

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           +AY++HG G EA+  F  M     ++P+  T   VLSACSH GLVD G   F+SM ++YG
Sbjct: 726 NAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 784

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H  C++D+L RAG L  A+  I    I+  +  W  L SAC  H N+ +G   A
Sbjct: 785 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 844

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E +  + YVLLSN+YA +  W+     R+ +K  GV K+PG SWI
Sbjct: 845 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895



 Score =  276 bits (707), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 187/645 (28%), Positives = 318/645 (49%), Gaps = 53/645 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVAN 96
           +   LFV++  S  + P+  + S  L AC    + AF    Q+HA  L  GL+    V N
Sbjct: 129 EVFGLFVRM-VSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCN 186

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ LY                               ++ G VD A  VFD +  +D   
Sbjct: 187 PLIDLY-------------------------------SRNGFVDLARRVFDGLRLKDHSS 215

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           + AMI+G ++N  E   I LF +M+ L +    Y+F+SVLS C     LE G QLH LV 
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K GFS    V NAL+++YF+ GN++ A  +F        D ++YN +++GL+  G  E+A
Sbjct: 276 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR--DAVTYNTLINGLSQCGYGEKA 333

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F+ M +  L P   T  S++ AC        G Q+HA   K GF +   +  A + +
Sbjct: 334 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 393

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ C  I+ A   F   + +++V WN M+  Y   +  R++   + +MQ   I P+++T+
Sbjct: 394 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 453

Query: 393 GSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            S+L +    G +E+ E IH+ +       N  V + LI  YAK  ++  A+ I    + 
Sbjct: 454 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 513

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++++W T+I G+    F  + L  F ++L   +R DE  L+ A+S+CA + +L+ G+QI
Sbjct: 514 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 573

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H     +   S +   NA++TLY++CG ++ S   F      D I+WNAL+S + Q G  
Sbjct: 574 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 633

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           +EA+  F  M   G I  +  TF + + A S    +  G ++  +++   G+    +  +
Sbjct: 634 EEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCN 691

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHG 671
            ++ +  + G + +AE+    Q ++  + N   W A+ +A + HG
Sbjct: 692 ALISMYAKCGSISDAEK----QFLEVSTKNEVSWNAIINAYSKHG 732



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 169/597 (28%), Positives = 286/597 (47%), Gaps = 24/597 (4%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A +VFD+MP+R +  +N MI             GLF  M   +V  +  +F+ VL  C  
Sbjct: 99  AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158

Query: 202 GLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           G + F    Q+H+ +   G      V N LI +Y   G V  A +VF+  +  + DH S+
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSW 216

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK 316
             M+ GL+      EA+  F DM V  + P+   F SV+SAC       +G Q+H   +K
Sbjct: 217 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 276

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            GF + T V NA +++Y   G +  A  IF+ + ++D V++NT+I+  +Q   G  A+  
Sbjct: 277 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 336

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  M   G+ PD  T  SL+   ++ G +   + +HA+    G  +N ++  AL++ YAK
Sbjct: 337 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 396

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              I+ A   F      N++ WN ++  + L        + F ++ + E+ P++YT    
Sbjct: 397 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 456

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +C R+  L  G+QIH  ++K N      + + +I +YAK G LD +  +      KD 
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 516

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW  +I+ Y Q+    +A++ F+ M D G I+ D+   T  +SAC+    + +G +I  
Sbjct: 517 VSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHA 575

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHG 671
                 GF       + ++ L  R G ++E+   +  +  +A  DN  W AL S     G
Sbjct: 576 QACVS-GFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEA-GDNIAWNALVSGFQQSG 631

Query: 672 NLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           N     R+   + + RE    + +   S + AA+    E AN+++  +   VI + G
Sbjct: 632 NNEEALRVF--VRMNREGIDNNNFTFGSAVKAAS----ETANMKQGKQVHAVITKTG 682



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 232/473 (49%), Gaps = 13/473 (2%)

Query: 185 VRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           +R ++ +   +L  C    G L+ GR+LHS + K G      +   L   Y   G++  A
Sbjct: 40  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            KVF+E         ++N M+  LAS   + E    F  M+  ++ P+E TF  V+ AC 
Sbjct: 100 FKVFDEMPERTI--FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 157

Query: 303 CPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              V +    Q+HA+ +  G    T V N  I +YS  G +D A  +F  L+ KD  SW 
Sbjct: 158 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 217

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN 415
            MIS  ++      AI  + +M  +GI P  + F S+L++   IE +E+   +H  V   
Sbjct: 218 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 277

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  ++  V NAL+S Y     +  A  IF NMS R+ +T+NTLING    G+  + ++ F
Sbjct: 278 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 337

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + +  L PD  TL+  + +C+   +L  G+Q+H Y  K    S   +  A++ LYAKC
Sbjct: 338 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 397

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
            D++ +L  F     ++ + WN ++ AY    + + +   F+ MQ +  I P+Q T+ ++
Sbjct: 398 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSI 456

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           L  C   G ++ G +I   ++    F       S ++D+  + G LD A  ++
Sbjct: 457 LKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL 508



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +SG+ ++AL +FV+++    +  + ++  + + A +   N   G Q+HA   
Sbjct: 621 NALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 679

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V N ++S+Y     +   ++ F E+   +  SW   ++A +K G    A +
Sbjct: 680 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 739

Query: 145 VFDKMPDRDLPVYNAMITG----CTENGYEDIGIGLFREMH 181
            FD+M   ++   +  + G    C+  G  D GI  F  M+
Sbjct: 740 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 780


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/611 (36%), Positives = 343/611 (56%), Gaps = 14/611 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            LS   + G V  A  VF +M +RDL  +N ++ G T+ G+ D  + L+  +    +R D
Sbjct: 75  LLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPD 134

Query: 189 NYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            Y+F SVL  C AG ++   GR++H+ V +  F   V VVNALITMY  CG+VV A  +F
Sbjct: 135 VYTFPSVLRSC-AGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC--- 303
           ++      D IS+N M+ G        E L  F  M   S+ P  +T  SV+SAC     
Sbjct: 194 DKMPTR--DRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGD 251

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            R+G Q+H+  +++ ++   SV N+ I MY S G   EA  +F+ ++ +D+VSW T+IS 
Sbjct: 252 ERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISG 311

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
                L   A+  Y  M+  G  PDE T  S+L   AS G ++M   +H      G I  
Sbjct: 312 CVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILY 371

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V+N+LI  Y+K +RI++A +IFH +  +++I+W ++ING  +N    + L  F ++++
Sbjct: 372 VVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMIL 431

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
              +P+  TL  ALS+CAR+ +L  GK+IH + LK  +     L NA++ LY +CG +  
Sbjct: 432 KS-KPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRT 490

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +L  FN+  EKD  +WN L++ YAQ G+G   +  FK M +   I PD  TF ++L ACS
Sbjct: 491 ALNQFNLN-EKDVGAWNILLTGYAQKGKGAMVMELFKRMVE-SEINPDDVTFISLLCACS 548

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            +G+V +G   F  M  +Y   P   H +C++DLLGRAG L+EA   I    I+     W
Sbjct: 549 RSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIW 608

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            AL +AC  H ++ LG + A  + +++ +    Y+LL N+YA +G W+E A +R  +K  
Sbjct: 609 GALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEE 668

Query: 721 GVIKQPGCSWI 731
           G+I  PGCSW+
Sbjct: 669 GLIVDPGCSWV 679



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 243/480 (50%), Gaps = 27/480 (5%)

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVV-----NALITMYF 234
           M ++ +  +   F +++ +C+    + G      V K+  S LV+++     NAL++M+ 
Sbjct: 24  MQEVKIPVEEDCFVALIRLCEN---KRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFV 80

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G+V +A  VF        D  S+NV++ G    G  +EAL  +  +L A +RP   TF
Sbjct: 81  RFGDVGNAWNVFGRMGER--DLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTF 138

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            SV+ +C        G +VHA  ++  F+    V NA ITMY  CG +  A M+F ++  
Sbjct: 139 PSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPT 198

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMI 408
           +D +SWN MIS Y + +     +  +  M+ + I PD  T  S++++   +    +   +
Sbjct: 199 RDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQL 258

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H++V       NI V N+LI  Y      K+A  +F  M  R++++W T+I+G + N  P
Sbjct: 259 HSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLP 318

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + L+ +  + ++   PDE T++  LS+CA +  L  G ++H    +   I  + + N++
Sbjct: 319 DKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSL 378

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           I +Y+KC  ++ +L +F+ + +KD ISW ++I+    +    EA+  F+ M  + + KP+
Sbjct: 379 IDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKM--ILKSKPN 436

Query: 589 QATFTAVLSACSHAGLVDDGTRI----FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             T  + LSAC+  G +  G  I      + +   GF+P     + +LDL  R G +  A
Sbjct: 437 SVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLP-----NAILDLYVRCGRMRTA 491



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 268/556 (48%), Gaps = 47/556 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N+ +   +++G + +AL L+ +I  +  ++PD+Y+  + L +CA   +   G ++H
Sbjct: 100 LFSWNVLVGGYTKAGFFDEALCLYHRILWA-GIRPDVYTFPSVLRSCAGAMDLVRGREVH 158

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ +R        V N ++++Y    D+VS + +F                         
Sbjct: 159 AHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF------------------------- 193

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                 DKMP RD   +NAMI+G  EN     G+ LF  M +L +  D  +  SV+S C+
Sbjct: 194 ------DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHIS 258
             G    G QLHS V ++ +   +SV N+LI MY + G+  +A  VF    G  C D +S
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVF---SGMECRDVVS 304

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAM 315
           +  ++ G       ++AL  ++ M +    P E+T  SV+SAC       +G ++H  A 
Sbjct: 305 WTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAE 364

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++G   Y  V+N+ I MYS C +I++A  IF ++ +KD++SW ++I+     N    A++
Sbjct: 365 RTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALI 424

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + +M  +  +P+  T  S L   A  G +   + IHA     G+  +  + NA++  Y 
Sbjct: 425 FFRKM-ILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYV 483

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           +  R++ A   F N++ +++  WN L+ G+   G     ++ F  ++ SE+ PD+ T   
Sbjct: 484 RCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFIS 542

Query: 493 ALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
            L +C+R   +  G +    +  N ++   +     ++ L  + G L+ +      M I+
Sbjct: 543 LLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIK 602

Query: 551 KDTISWNALISAYAQH 566
            D   W AL++A   H
Sbjct: 603 PDPAIWGALLNACRIH 618



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 178/352 (50%), Gaps = 10/352 (2%)

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV---- 325
           G +E+AL     M    +   E  FV+++  C   R GY       K+   +  ++    
Sbjct: 12  GNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKR-GYSEGEYVWKAVLSSLVTLLSVR 70

Query: 326 -SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
             NA ++M+   G +  A  +F R+ E+D+ SWN ++  Y +      A+  Y  +   G
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 385 IRPDEFTFGSLLAS-SGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           IRPD +TF S+L S +G +++V    +HA V       ++ V NALI+ Y K   +  A 
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSAR 190

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  M  R+ I+WN +I+G+  N   ++GL+ F  +    + PD  T++  +S+C  + 
Sbjct: 191 MLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLG 250

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
             R G Q+H YV++      +S+ N++I +Y   G    +  VF+ M  +D +SW  +IS
Sbjct: 251 DERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIIS 310

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
               +    +A+  +K M+  G + PD+ T  +VLSAC+  G +D G ++ +
Sbjct: 311 GCVDNLLPDKALETYKTMEITGTM-PDEVTIASVLSACASLGQLDMGMKLHE 361



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 172/353 (48%), Gaps = 16/353 (4%)

Query: 380 MQSVGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           MQ V I  +E  F +L+       G+ E   +  A +     + ++++ NAL+S + +  
Sbjct: 24  MQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFG 83

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +  A+ +F  M  R++ +WN L+ G+   GF  + L  +  +L + +RPD YT    L 
Sbjct: 84  DVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLR 143

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           SCA    L  G+++H +V++ +    + + NA+IT+Y KCGD+  +  +F+ M  +D IS
Sbjct: 144 SCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRIS 203

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+IS Y ++ E  E +  F  M+++  I PD  T T+V+SAC   G    GT++   +
Sbjct: 204 WNAMISGYFENDECLEGLELFFRMRELS-IDPDLMTMTSVISACELLGDERLGTQLHSYV 262

Query: 616 VNDY--GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           V     G I   + L   + +    G+  EAE V +    +    +W  + S C    NL
Sbjct: 263 VRTAYDGNISVYNSL---IQMYLSVGHWKEAESVFSGMECRDVV-SWTTIISGCV--DNL 316

Query: 674 RLGRIIAGL-LLEREQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRTGVI 723
              + +     +E     P    + S + A A  G  +    + EL +RTG I
Sbjct: 317 LPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHI 369


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 226/708 (31%), Positives = 372/708 (52%), Gaps = 43/708 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G  + A  LF ++ ++    P+  +  + L AC +      G ++H+  ++AG +  
Sbjct: 104 AQQGFKKKAFQLFEEMQNA-GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           P V N++LS+Y    DL   ++VF+ I                                 
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGIS-------------------------------P 191

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQL 210
           RD+  YN M+    +  Y    +GLF +M    +  D  ++ ++L +     +L+ G+++
Sbjct: 192 RDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRI 251

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV-CDHISYNVMMDGLASV 269
           H L  + G +  + V  AL+TM   CG+V  A + F   KG    D + YN ++  LA  
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAF---KGIADRDVVVYNALIAALAQH 308

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
           G   EA  ++  M    +  +  T++S+++AC   +    G  +H+   + G  +   + 
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA I+MY+ CG + +A  +F  + ++D++SWN +I+ YA+R     A+  Y +MQS G++
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P   TF  LL   A+S      +MIH  +  +GI +N  ++NAL++ Y +   + +A  +
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F     R++I+WN++I G   +G      + F E+   EL PD  T +  LS C    +L
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GKQIHG + ++ L   ++LGNA+I +Y +CG L  +  VF+ +  +D +SW A+I   
Sbjct: 549 ELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGC 608

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A  GE  +A+  F  MQ+ G   PD +TFT++LSAC+HAGLV +G +IF SM ++YG +P
Sbjct: 609 ADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLP 668

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H  C++ LLGRA    EAE +IN       +  W  L  AC  HGN+ L    A   
Sbjct: 669 TIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNA 728

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L+     P+VY+LLSN+YAAAG W++ A IR +++  G+ K+PG SWI
Sbjct: 729 LKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 776



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/636 (27%), Positives = 314/636 (49%), Gaps = 48/636 (7%)

Query: 47  IHSSHKLKP---DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK 103
           + ++H+ +P   D  +    L  C   R      ++HA  + AG+     ++N ++++Y 
Sbjct: 14  VSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYV 73

Query: 104 NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
             R ++   +VF E+   DV SW + +S         YA                     
Sbjct: 74  KCRSVLDAHQVFKEMPRRDVISWNSLISC--------YA--------------------- 104

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL 222
             + G++     LF EM       +  ++ S+L+ C     LE G+++HS + K+G+   
Sbjct: 105 --QQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
             V N+L++MY  CG++  A +VF  A     D +SYN M+   A    V+E L  F  M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVF--AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQM 220

Query: 283 LVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
               + P ++T+++++ A   P +   G ++H   ++ G  +   V  A +TM   CG +
Sbjct: 221 SSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDV 280

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL--- 396
           D A   F  + ++D+V +N +I+  AQ      A   Y  M+S G+  +  T+ S+L   
Sbjct: 281 DSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNAC 340

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           ++S  +E  ++IH+ +  +G  +++Q+ NALIS YA+   + +A ++F+ M  R++I+WN
Sbjct: 341 STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWN 400

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G+       + ++ + ++    ++P   T    LS+CA  S+   GK IH  +L++
Sbjct: 401 AIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS 460

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            + S   L NA++ +Y +CG L  +  VF     +D ISWN++I+ +AQHG  + A   F
Sbjct: 461 GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + MQ+   ++PD  TF +VLS C +   ++ G +I    + + G     +  + ++++  
Sbjct: 521 QEMQNE-ELEPDNITFASVLSGCKNPEALELGKQIH-GRITESGLQLDVNLGNALINMYI 578

Query: 637 RAGYLDEAERVINS-QHIQARSDNWWALFSACAAHG 671
           R G L +A  V +S QH    S  W A+   CA  G
Sbjct: 579 RCGSLQDARNVFHSLQHRDVMS--WTAMIGGCADQG 612



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 240/480 (50%), Gaps = 46/480 (9%)

Query: 288 RPSEL---TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           RP+E    T+V+++  C   R+     ++HAQ +++G      +SN  I MY  C  + +
Sbjct: 21  RPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLD 80

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---S 398
           A  +F  +  +D++SWN++IS YAQ+   + A   + EMQ+ G  P++ T+ S+L    S
Sbjct: 81  AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYS 140

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
              +E  + IH+ +   G   + +V N+L+S Y K   + +A Q+F  +SPR+++++NT+
Sbjct: 141 PAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           +  +    +  + L  F ++    + PD+ T    L +    S L  GK+IH   ++  L
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S + +G A++T+  +CGD+D + + F  + ++D + +NALI+A AQHG   EA   +  
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 579 MQDVGRIKPDQATFTAVLSACS-----------HAGLVDDG----TRIFDSMVNDYG--- 620
           M+  G +  ++ T+ ++L+ACS           H+ + +DG     +I +++++ Y    
Sbjct: 321 MRSDG-VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG 379

Query: 621 ----------FIPAEDHLSCMLDLLGRAGYLDEAE-----RVINSQHIQARSDNWWALFS 665
                      +P  D +S    + G A   D  E     + + S+ ++     +  L S
Sbjct: 380 DLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           ACA       G++I   +L R   K + ++   L N+Y   G   EA N+ E  +   VI
Sbjct: 440 ACANSSAYADGKMIHEDIL-RSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 44/312 (14%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  L+  N  +A  +R     +A+ L+ Q+ S   +KP   +    L+ACAN    A G 
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSE-GVKPGRVTFLHLLSACANSSAYADGK 451

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H   LR+G+K+  H+AN ++++Y+    L+  + VF   Q  DV SW + ++     G
Sbjct: 452 MIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA-----G 506

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           H  +                     G  E  Y+     LF+EM   ++  DN +FASVLS
Sbjct: 507 HAQH---------------------GSYETAYK-----LFQEMQNEELEPDNITFASVLS 540

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C +   LE G+Q+H  +T+SG    V++ NALI MY  CG++ DA  VF   +    D 
Sbjct: 541 GCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR--DV 598

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCPRVGYQVHAQAM 315
           +S+  M+ G A  G   +A+  F  M     RP +  TF S++SAC         HA  +
Sbjct: 599 MSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSAC--------NHAGLV 650

Query: 316 KSGFEAYTSVSN 327
             G++ ++S+ +
Sbjct: 651 LEGYQIFSSMES 662


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 240/717 (33%), Positives = 382/717 (53%), Gaps = 46/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  ++ G+  +A+  F  +  +  +K    +L + L+A A+L    FG  +HA AL
Sbjct: 296 NLMISGHAKGGYGVEAIEFFQNMRKA-GIKSTRSTLGSVLSAIASLAALDFGLLVHAEAL 354

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +  +V ++++S+Y                                K G ++ A +
Sbjct: 355 KQGLHSNVYVGSSLVSMY-------------------------------AKCGKMEAAKK 383

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VFD + ++++ ++NAM+ G  +NGY +  + LF  M       D+++++S+LS C     
Sbjct: 384 VFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKY 443

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G QLHS++ K+ F+  + V NAL+ MY   G + DA + FE  +    D++S+NV++
Sbjct: 444 LDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNR--DNVSWNVII 501

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G        EA   FR M +  + P E++  S++SAC   R    G QVH  ++K+G E
Sbjct: 502 VGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQE 561

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                 ++ I MY+ CG ID A  I A + E+ +VS N +I+ YAQ NL   A+  + +M
Sbjct: 562 TKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDM 620

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNER 436
              GI   E TF SLL +      + +   IH+ +   G+  + + +  +L+  Y  + R
Sbjct: 621 LVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLR 680

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
              A  +F   S P++ + W  +I+G   N   V  LQ + E+    + PD+ T   AL 
Sbjct: 681 TTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALR 740

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI-EKDTI 554
           +CA +SS++ G + H  +      S     +A++ +YAKCGD+  S++VF  M  +KD I
Sbjct: 741 ACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVI 800

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I  +A++G  ++A+  F  M+    + PD  TF  VL+ACSH+G V +G  IFD 
Sbjct: 801 SWNSMIVGFAKNGYAEDALRVFDEMKQ-SHVTPDDVTFLGVLTACSHSGRVSEGRLIFDM 859

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MVN YG  P  DH +CM+DLLGR G L EAE  IN  + +  +  W  +  AC  HG+  
Sbjct: 860 MVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDI 919

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+  A  L+E E    S YVLLSNIYAA+G W+E   +R  ++  GV K PGCSWI
Sbjct: 920 RGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWI 976



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 165/624 (26%), Positives = 297/624 (47%), Gaps = 93/624 (14%)

Query: 48  HSSHKLKPDIYS--LSTTLAACANLRNAAFGNQL--------------HAYALRAGLKAY 91
           H SH LKP IY+  L   L     ++  +  +++              HA +L+ G  + 
Sbjct: 34  HPSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSK 93

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             + N I+ LY    D+   +R F ++++ D+ +W + LS  +K                
Sbjct: 94  GVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSK---------------- 137

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                           G+  + +  F  +    V  + ++FA VLS C    +++ GRQ+
Sbjct: 138 ---------------QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQV 182

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V K GF  +     ALI MY  C  + DA  +F+ A     D +S+  M+ G   VG
Sbjct: 183 HCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGA--VELDKVSWTSMIGGYIKVG 240

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
             EEA+  F++M      P ++ FV+V++A                              
Sbjct: 241 LPEEAVKVFQEMEKVGQEPDQVAFVTVINA------------------------------ 270

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
             Y   G++D A  +F+R+  +++V+WN MIS +A+   G  AI  +  M+  GI+    
Sbjct: 271 --YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRS 328

Query: 391 TFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T GS+L   AS   ++   ++HA     G+ +N+ V ++L+S YAK  +++ A ++F  +
Sbjct: 329 TLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTL 388

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           + +N++ WN ++ G++ NG+  + ++ F  +      PD++T S  LS+CA +  L  G 
Sbjct: 389 NEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGH 448

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+H  ++KN   S + +GNA++ +YAK G L+ + + F ++  +D +SWN +I  Y Q  
Sbjct: 449 QLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEE 508

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
           +  EA   F+ M  +G I PD+ +  ++LSAC+    ++ G ++    V        E  
Sbjct: 509 DEVEAFHLFRRMNLLG-ILPDEVSLASILSACASVRGLEQGKQVHCLSVK----TGQETK 563

Query: 628 L---SCMLDLLGRAGYLDEAERVI 648
           L   S ++D+  + G +D A +++
Sbjct: 564 LYSGSSLIDMYAKCGAIDSAHKIL 587



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 188/750 (25%), Positives = 330/750 (44%), Gaps = 98/750 (13%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK-- 112
           P+ ++ +  L++CA L     G Q+H   ++ G ++  +    ++ +Y     L   +  
Sbjct: 158 PNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSI 217

Query: 113 -----------------------------RVFSEI----QNPDVYSWTTFLSACTKMGHV 139
                                        +VF E+    Q PD  ++ T ++A   +G +
Sbjct: 218 FDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRL 277

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-V 198
           D A ++F +MP+R++  +N MI+G  + GY    I  F+ M K  ++    +  SVLS +
Sbjct: 278 DNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAI 337

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                L+FG  +H+   K G    V V ++L++MY  CG +  A KVF+       + + 
Sbjct: 338 ASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ--NVVL 395

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAM 315
           +N M+ G    G   E +  F +M      P + T+ S++SAC C +   +G+Q+H+  +
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+ F +   V NA + MY+  G +++A   F  ++ +D VSWN +I  Y Q      A  
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  M  +GI PDE +  S+L   AS   +E  + +H      G  T +   ++LI  YA
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   I  A++I   M  R++++ N LI G+       Q +  F ++L+  +   E T + 
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFAS 634

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKC-GDLDCSLRVFNMMIE 550
            L +C     L  G+QIH  +LK  L +    LG +++ +Y       D S+        
Sbjct: 635 LLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNP 694

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K  + W A+IS  +Q+     A+  +K M+    + PDQATF + L AC+    + DGT 
Sbjct: 695 KSAVVWTAMISGLSQNDCSVVALQLYKEMRSC-NVLPDQATFVSALRACAVVSSIKDGTE 753

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDL--------------------------------LGRA 638
              S++   GF   E   S ++D+                                  + 
Sbjct: 754 TH-SLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812

Query: 639 GYLDEAERVINS---QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GY ++A RV +     H+      +  + +AC+  G +  GR+I              + 
Sbjct: 813 GYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLI--------------FD 858

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           ++ N+Y      +  A + +LL R G +K+
Sbjct: 859 MMVNLYGMQPRADHCACMVDLLGRWGSLKE 888



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 16/332 (4%)

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           S F    ++IHA     G  +   + N ++  YAK   +  A + F  +  ++I+ WN++
Sbjct: 72  SQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSI 131

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           ++     GFP   +++F  L  S + P+E+T ++ LSSCAR+  ++ G+Q+H  V+K   
Sbjct: 132 LSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF 191

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S      A+I +YAKC  L  +  +F+  +E D +SW ++I  Y + G  +EAV  F+ 
Sbjct: 192 ESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQE 251

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M+ VG+ +PDQ  F  V++A    G +D+ + +F  M       P  + ++  L + G A
Sbjct: 252 MEKVGQ-EPDQVAFVTVINAYVDLGRLDNASDLFSRM-------PNRNVVAWNLMISGHA 303

Query: 639 --GYLDEAERVINSQH---IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
             GY  EA     +     I++      ++ SA A+   L  G ++    L ++    +V
Sbjct: 304 KGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEAL-KQGLHSNV 362

Query: 694 YV--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           YV   L ++YA  G  E A  + + L    V+
Sbjct: 363 YVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/611 (35%), Positives = 346/611 (56%), Gaps = 14/611 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            LS   + G++  A  VF KM +RD+  +N ++ G  + G  D  + L+  M   ++R +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 189 NYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            Y+F SVL  C AG+ +   G+++H+ V + GF   V V NALITMY  CG++ +A  +F
Sbjct: 198 VYTFPSVLKTC-AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC--- 303
           ++      D IS+N M+ G    G   E L  F  M   S+ P  +T  +V SAC     
Sbjct: 257 DKMPKR--DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            R+G  VH   +KS F    S++N+ I MYSS G+++EA  +F+R++ KD+VSW  MI++
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN 420
                L   A+  Y  M+  GI PDE T  S+L++   I  +++   +H      G++++
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + VSN+LI  Y+K + +  A ++F N+S +N+++W +LI G  +N    + L  F ++  
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE 494

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S ++P+  TL   LS+CARI +L  GK+IH + L+  +     L NA++ +Y +CG    
Sbjct: 495 S-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +L  FN   +KD  +WN L++ YAQ G+ K AV  F  M ++  I PD+ TF ++L ACS
Sbjct: 554 ALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACS 611

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            +G+V +G   F+ M N Y   P   H +C++D+LGRAG LD+A   I    I+  +  W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            AL +AC  H N+ LG I A  + E++      Y+LL N+YA  G W++ + +R L++  
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 721 GVIKQPGCSWI 731
           G+   PGCSW+
Sbjct: 732 GLSADPGCSWV 742



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 151/562 (26%), Positives = 276/562 (49%), Gaps = 51/562 (9%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  +   N+ +   +++G + +AL+L+ ++  + +++P++Y+  + L  CA + + A G
Sbjct: 159 SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA-EIRPNVYTFPSVLKTCAGVSDIARG 217

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++HA+ +R G ++   V N ++++Y    D+ + + +F +                   
Sbjct: 218 KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK------------------- 258

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                       MP RD   +NAMI+G  ENG    G+ LF  M +L V  D  +  +V 
Sbjct: 259 ------------MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVA 306

Query: 197 SVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           S C+  LL+    GR +H  V KS F   +S+ N+LI MY + G + +A  VF   +   
Sbjct: 307 SACE--LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK- 363

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            D +S+  M+  L S     +A+  ++ M +  + P E+T VSV+SAC C     +G ++
Sbjct: 364 -DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+K+G  ++  VSN+ I MYS C  +D A  +F  +  K++VSW ++I      N  
Sbjct: 423 HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS 482

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A+L + +M+   ++P+  T  S+L++   I  +   + IHA     G+  +  + NA+
Sbjct: 483 FEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y +  R   A   F N   +++  WN L+ G+   G     ++ F ++L  E+ PDE
Sbjct: 542 LDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLR-V 544
            T    L +C++   +  G +    ++KN  NL   +     ++ +  + G LD +   +
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFN-IMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFI 659

Query: 545 FNMMIEKDTISWNALISAYAQH 566
            +M I  D   W AL++A   H
Sbjct: 660 QDMPIRPDAAIWGALLNACRIH 681



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 238/478 (49%), Gaps = 23/478 (4%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           + N+ +  L   G +E+A+ R   ML   +   E  +++++  C     P  G +V+   
Sbjct: 64  TQNLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELV 123

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
             S       + NA ++M+   G + +A  +F ++ E+D+ SWN ++  YA+      A+
Sbjct: 124 SSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEAL 183

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
             Y  M    IRP+ +TF S+L +   +  +   + IHA V   G  +++ V NALI+ Y
Sbjct: 184 NLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMY 243

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   I  A  +F  M  R+ I+WN +I+G+  NG  ++GL+ FS +    + PD  T++
Sbjct: 244 VKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMT 303

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
              S+C  + + R G+ +HGYV+K+     +S+ N++I +Y+  G L+ +  VF+ M  K
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SW A+I++   H    +AV  +K M+  G I PD+ T  +VLSAC+  G +D G R+
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEG-ILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAH 670
            +  +   G +      + ++D+  +   +D A  V   ++I  ++  +W +L       
Sbjct: 423 HEIAIKT-GLVSHVIVSNSLIDMYSKCKCVDNALEVF--RNISGKNVVSWTSLILG---- 475

Query: 671 GNLRL-GRIIAGLLLER---EQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRTGV 722
             LR+  R    LL  R   E  KP+   L+S + A A  G       I     RTGV
Sbjct: 476 --LRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 165/310 (53%), Gaps = 16/310 (5%)

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           +++ NAL+S + +   +  A+ +F  MS R++ +WN L+ G+   G   + L  +  +L 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           +E+RP+ YT    L +CA +S +  GK+IH +V++    S + +GNA+IT+Y KCGD+  
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  +F+ M ++D ISWNA+IS Y ++G G E +  F  M+++  + PD  T T V SAC 
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS-VDPDLITMTTVASACE 310

Query: 601 HAGLVDD---GTRIFDSMVNDY--GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
              L+D+   G  +   +V     G I   + L  M   LGR   L+EAE V  S+    
Sbjct: 311 ---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR---LEEAETVF-SRMESK 363

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAANI 713
              +W A+ ++  +H  L    +    ++E E   P    L+S + A A  G  +    +
Sbjct: 364 DVVSWTAMIASLVSH-KLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 714 RELLKRTGVI 723
            E+  +TG++
Sbjct: 423 HEIAIKTGLV 432


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/611 (35%), Positives = 346/611 (56%), Gaps = 14/611 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            LS   + G++  A  VF KM +RD+  +N ++ G  + G  D  + L+  M   ++R +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 189 NYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            Y+F SVL  C AG+ +   G+++H+ V + GF   V V NALITMY  CG++ +A  +F
Sbjct: 198 VYTFPSVLKTC-AGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC--- 303
           ++      D IS+N M+ G    G   E L  F  M   S+ P  +T  +V SAC     
Sbjct: 257 DKMPKR--DRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            R+G  VH   +KS F    S++N+ I MYSS G+++EA  +F+R++ KD+VSW  MI++
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN 420
                L   A+  Y  M+  GI PDE T  S+L++   I  +++   +H      G++++
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSH 434

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + VSN+LI  Y+K + +  A ++F N+S +N+++W +LI G  +N    + L  F ++  
Sbjct: 435 VIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE 494

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S ++P+  TL   LS+CARI +L  GK+IH + L+  +     L NA++ +Y +CG    
Sbjct: 495 S-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVP 553

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +L  FN   +KD  +WN L++ YAQ G+ K AV  F  M ++  I PD+ TF ++L ACS
Sbjct: 554 ALNQFNSQ-KKDVTAWNILLTGYAQQGQAKLAVELFDKMLEL-EIHPDEITFISLLCACS 611

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            +G+V +G   F+ M N Y   P   H +C++D+LGRAG LD+A   I    I+  +  W
Sbjct: 612 KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIW 671

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            AL +AC  H N+ LG I A  + E++      Y+LL N+YA  G W++ + +R L++  
Sbjct: 672 GALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRER 731

Query: 721 GVIKQPGCSWI 731
           G+   PGCSW+
Sbjct: 732 GLSADPGCSWV 742



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/562 (27%), Positives = 277/562 (49%), Gaps = 51/562 (9%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  +   N+ +   +++G + +AL+L+ ++  + +++P++Y+  + L  CA + + A G
Sbjct: 159 SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWA-EIRPNVYTFPSVLKTCAGVSDIARG 217

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++HA+ +R G ++   V N ++++Y    D+ + + +F                     
Sbjct: 218 KEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF--------------------- 256

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                     DKMP RD   +NAMI+G  ENG    G+ LF  M +L V  D  +  +V 
Sbjct: 257 ----------DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVA 306

Query: 197 SVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           S C+  LL+    GR +H  V KS F   +S+ N+LI MY + G + +A  VF   +   
Sbjct: 307 SACE--LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK- 363

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            D +S+  M+  L S     +A+  ++ M +  + P E+T VSV+SAC C     +G ++
Sbjct: 364 -DVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+K+G  ++  VSN+ I MYS C  +D A  +F  +  K++VSW ++I      N  
Sbjct: 423 HEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRS 482

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A+L + +M+   ++P+  T  S+L++   I  +   + IHA     G+  +  + NA+
Sbjct: 483 FEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y +  R   A   F N   +++  WN L+ G+   G     ++ F ++L  E+ PDE
Sbjct: 542 LDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLR-V 544
            T    L +C++   +  G +    ++KN  NL   +     ++ +  + G LD +   +
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFN-IMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFI 659

Query: 545 FNMMIEKDTISWNALISAYAQH 566
            +M I  D   W AL++A   H
Sbjct: 660 QDMPIRPDAAIWGALLNACRIH 681



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 238/478 (49%), Gaps = 23/478 (4%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           + N+ +  L   G +E+A+ R   ML   +   E  +++++  C     P  G +V+   
Sbjct: 64  TQNLELRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELV 123

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
             S       + NA ++M+   G + +A  +F ++ E+D+ SWN ++  YA+      A+
Sbjct: 124 SSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEAL 183

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
             Y  M    IRP+ +TF S+L +   +  +   + IHA V   G  +++ V NALI+ Y
Sbjct: 184 NLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMY 243

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   I  A  +F  M  R+ I+WN +I+G+  NG  ++GL+ FS +    + PD  T++
Sbjct: 244 VKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMT 303

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
              S+C  + + R G+ +HGYV+K+     +S+ N++I +Y+  G L+ +  VF+ M  K
Sbjct: 304 TVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESK 363

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SW A+I++   H    +AV  +K M+  G I PD+ T  +VLSAC+  G +D G R+
Sbjct: 364 DVVSWTAMIASLVSHKLPFKAVETYKMMELEG-ILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAH 670
            +  +   G +      + ++D+  +   +D A  V   ++I  ++  +W +L       
Sbjct: 423 HEIAIKT-GLVSHVIVSNSLIDMYSKCKCVDNALEVF--RNISGKNVVSWTSLILG---- 475

Query: 671 GNLRL-GRIIAGLLLER---EQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRTGV 722
             LR+  R    LL  R   E  KP+   L+S + A A  G       I     RTGV
Sbjct: 476 --LRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 165/310 (53%), Gaps = 16/310 (5%)

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           +++ NAL+S + +   +  A+ +F  MS R++ +WN L+ G+   G   + L  +  +L 
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           +E+RP+ YT    L +CA +S +  GK+IH +V++    S + +GNA+IT+Y KCGD+  
Sbjct: 192 AEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISN 251

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  +F+ M ++D ISWNA+IS Y ++G G E +  F  M+++  + PD  T T V SAC 
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELS-VDPDLITMTTVASACE 310

Query: 601 HAGLVDD---GTRIFDSMVNDY--GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
              L+D+   G  +   +V     G I   + L  M   LGR   L+EAE V  S+    
Sbjct: 311 ---LLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGR---LEEAETVF-SRMESK 363

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAANI 713
              +W A+ ++  +H  L    +    ++E E   P    L+S + A A  G  +    +
Sbjct: 364 DVVSWTAMIASLVSH-KLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRL 422

Query: 714 RELLKRTGVI 723
            E+  +TG++
Sbjct: 423 HEIAIKTGLV 432


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/725 (30%), Positives = 383/725 (52%), Gaps = 43/725 (5%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +T K  ++  N  L+   ++G  + ++ +F+ +  S ++  D  + +  L AC+ L +  
Sbjct: 134 DTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGG 193

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G Q+H   +R G              YK                  DV + +  L    
Sbjct: 194 LGIQVHGLIVRMGF-------------YK------------------DVVTGSALLDMYA 222

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K   +D + ++F ++P ++   ++A+I GC +N    +G+ LF+EM K+ +      +AS
Sbjct: 223 KCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYAS 282

Query: 195 VLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           V   C AGL  L+ G QLH+   K  F   ++V  A + MY  CG++ DA ++F     +
Sbjct: 283 VFRSC-AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH 341

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
                 YN ++ G     +  EAL  F+ +L + L  +E++     SAC   +    G Q
Sbjct: 342 SLQ--CYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQ 399

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+ ++KS   +   V+N+ + MY  C  + EAC +F  ++ +D VSWN +I+ + Q   
Sbjct: 400 LHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGN 459

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
               +  +  M  + + PD+FT+GS+L +    + +     IH  +  +G+  +  V  A
Sbjct: 460 EEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGA 519

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI  Y K   I++A +I   +  + +++WN +I GF L          F E+L   ++PD
Sbjct: 520 LIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPD 579

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T ++ L +CA ++S+  GKQIHG ++K  L S + + + ++ +Y+KCG++  S  VF 
Sbjct: 580 NFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFE 639

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
               KD ++WNA+I  YAQHG G+EA+  F+ MQ +  ++P+ ATF ++L AC+H G +D
Sbjct: 640 KAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQ-LENVRPNHATFVSILRACAHMGFID 698

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            G   F++M+ +YG  P  +H SCM+D++GR+G + EA ++I     +A +  W  L S 
Sbjct: 699 KGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSI 758

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN+ +       +L+ E +  S  +LLSNIYA AG+W + + +R++++   + K+P
Sbjct: 759 CKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEP 818

Query: 727 GCSWI 731
           GCSWI
Sbjct: 819 GCSWI 823



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 176/677 (25%), Positives = 319/677 (47%), Gaps = 46/677 (6%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           KL   I + S  +  C++  +   G Q HA  + +G     +++N ++ +Y     L   
Sbjct: 38  KLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYA 97

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
            +VF ++   DV S+ T +S     G ++ A E F   P RD+  +N+M++G  +NG   
Sbjct: 98  YKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECR 157

Query: 172 IGIGLFREMHK-LDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVV 226
             I +F +M +  +V  D  +FA VL  C    D GL   G Q+H L+ + GF   V   
Sbjct: 158 KSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGL---GIQVHGLIVRMGFYKDVVTG 214

Query: 227 NALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           +AL+ MY  C  + D+ K+F E   K +VC    ++ ++ G          L  F++M  
Sbjct: 215 SALLDMYAKCKRLDDSLKIFSEIPVKNWVC----WSAIIAGCVQNDEHILGLELFKEMQK 270

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             +  S+  + SV  +C      +VG Q+HA A+K  F +  +V  A + MY+ CG + +
Sbjct: 271 VGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLAD 330

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A  IF  L +  +  +N +I    +   G  A+  +  +   G+  +E +     ++   
Sbjct: 331 AQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACAS 390

Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           I+       +H+    + + +NI V+N+++  Y K E + +A  +F  M  R+ ++WN +
Sbjct: 391 IKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAV 450

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I     NG   + L  F+ +L   + PD++T    L +C+   +L  G +IH  ++K+ L
Sbjct: 451 IAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGL 510

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                +G A+I +Y KCG ++ + ++ + + ++  +SWNA+I+ +      ++A S F  
Sbjct: 511 GLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYE 570

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH-----LSCMLD 633
           M  +  +KPD  T+  VL AC++   V  G +I   +      I  E H      S ++D
Sbjct: 571 MLKMS-VKPDNFTYAIVLDACANLASVGLGKQIHGQI------IKLELHSDVYITSTLVD 623

Query: 634 LLGRAGYLDEA----ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL--LERE 687
           +  + G + ++    E+  N   +      W A+    A HG   LG    G    ++ E
Sbjct: 624 MYSKCGNMQDSALVFEKAPNKDFV-----TWNAMICGYAQHG---LGEEALGYFERMQLE 675

Query: 688 QDKPSVYVLLSNIYAAA 704
             +P+    +S + A A
Sbjct: 676 NVRPNHATFVSILRACA 692


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/710 (31%), Positives = 375/710 (52%), Gaps = 48/710 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ +G +  AL  + ++    KL+PD ++  + + +CA + +   G  +H +A+  G ++
Sbjct: 96  LTHNGLFTQALGYYTEMRE-KKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFES 154

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             ++ N ++ +Y    DL + + VF E+ N D  SW                        
Sbjct: 155 DLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW------------------------ 190

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQ 209
                  N++I+G   NG+ +  + ++ +     +  D ++ +SVL  C + + ++ G  
Sbjct: 191 -------NSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVA 243

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H ++ K G +  V + N L++MYF    + +A +VF  +K  V D +++N M+ G A +
Sbjct: 244 VHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF--SKMAVKDSVTWNTMICGYAQL 301

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           GR E ++  F DM +    P  L+  S + AC      +VG  VH   + SGFE  T   
Sbjct: 302 GRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I MY+ CG +  A  +F   + KD V+WN++I+ Y Q    +  + ++ +M  +  +
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERK 419

Query: 387 PDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           PD  TF  LL  S F ++ ++     IH  V   G    + + N+L+  YAK   +    
Sbjct: 420 PDSVTFVLLL--SIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  MS  +II+WNT+I   +       G Q  +E+    L PDE T+   L  C+ ++
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
             R GK+IHGY+ K+   S + +GNA+I +Y+KCG L+  ++VF  M EKD ++W ALIS
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A+  +GEGK+A+  F+ M+  G + PD   F A + ACSH+G+V +G R FD M  DY  
Sbjct: 598 AFGMYGEGKKALKAFQDMELSG-VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNL 656

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H +C++DLL R+G L +AE  I S  ++  +  W AL SAC A GN  + + ++ 
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +LE   D    YVL+SNIYA  G W++   +R  +K  G+ K+PG SWI
Sbjct: 717 KILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWI 766



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 235/469 (50%), Gaps = 13/469 (2%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +HSL+  SG S  V     LI+ Y    + + +  VF         ++ +N ++  L 
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYL-WNSIIRALT 97

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
             G   +AL  + +M    L+P   TF SV+++C   L   +G  VH  AM+ GFE+   
Sbjct: 98  HNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLY 157

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           + NA I MYS    +D A  +F  +  +D VSWN++IS Y        A+  Y + +  G
Sbjct: 158 IGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG 217

Query: 385 IRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + PD FT  S+L + G +  V+    +H  +   GI  ++ + N L+S Y K ER+++A 
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREAR 277

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  M+ ++ +TWNT+I G+   G     ++ F +++     PD  +++  + +C +  
Sbjct: 278 RVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSG 336

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L+ GK +H Y++ +         N +I +YAKCGDL  +  VF+    KD+++WN+LI+
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLIN 396

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y Q G  KE +  FK M+     KPD  TF  +LS  S    ++ G  I   ++  +GF
Sbjct: 397 GYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGF 453

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
                  + +LD+  + G +D+  +V +  ++ A     W    A + H
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFS--YMSAHDIISWNTVIASSVH 500



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 196/396 (49%), Gaps = 13/396 (3%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRN 368
           VH+  + SG       S   I+ Y+       +  +F  +    ++  WN++I       
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
           L   A+  Y EM+   ++PD FTF S++ S   I  +E+   +H      G  +++ + N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI  Y++   +  A  +F  MS R+ ++WN+LI+G+  NGF    L  + +  M+ + P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D +T+S  L +C  + +++ G  +HG + K  +   + +GN ++++Y K   L  + RVF
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + M  KD+++WN +I  YAQ G  + +V  F  M D G + PD  + T+ + AC  +G +
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID-GFV-PDMLSITSTIRACGQSGDL 338

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSC--MLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
             G  +   ++   GF    D ++C  ++D+  + G L  A+ V ++   +  S  W +L
Sbjct: 339 QVGKFVHKYLIGS-GF--ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSL 394

Query: 664 FSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLS 698
            +     G  + G      + +ER+ D  +  +LLS
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLS 430



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 124/227 (54%), Gaps = 5/227 (2%)

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           EF   SLL   +S+     +  +H+ +  +G+  ++  S  LIS YA+ +    +  +F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 446 NMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           ++SP  N+  WN++I     NG   Q L +++E+   +L+PD +T    ++SCARI  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G  +H + ++    S + +GNA+I +Y++  DLD +  VF  M  +D++SWN+LIS Y 
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +G  ++A+  +   +  G + PD  T ++VL AC     V +G  +
Sbjct: 199 SNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAV 244


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/727 (31%), Positives = 381/727 (52%), Gaps = 45/727 (6%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N   + L++ N  ++  +R+G Y D + +F+ + S    +PD ++  + + AC  + +  
Sbjct: 104 NMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVR 163

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +H   ++ GL     V N ++ +Y                                
Sbjct: 164 LGEVIHGMVIKMGLVLDVFVGNALVGMY-------------------------------G 192

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFA 193
           K G VD A +VFD MP+ +L  +N+MI   +ENG+      L  EM  +  +  D  +  
Sbjct: 193 KCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVV 252

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           ++L VC   G ++ G  +H L  K G S  V V NA++ MY  CG + +A   F   K  
Sbjct: 253 TILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSF--VKNN 310

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSACLCP---RVG 307
             + +S+N M+   +  G V EA    ++M +    ++ +E+T ++V+ ACL     R  
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL 370

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            ++H  + +  F+ +  +SNA I  Y+ CG ++ A  +F  + +K + SWN +I  +AQ 
Sbjct: 371 KELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQN 429

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVS 424
              R A+    +M   G +PD FT  SLL +   ++ ++    IH +V  NG+ T+  V 
Sbjct: 430 GDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVG 489

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            +L+S Y    +   A  +F  M  +N+++WN +I+G+  NG P + L  F + L   ++
Sbjct: 490 TSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQ 549

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
             E  +     +C+++S+LR GK+ HGYVLK        +G ++I +YAK G +  S +V
Sbjct: 550 SHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKV 609

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ + +K+  SWNA+I A+  HG GKEA+  ++ M+ VG++ PD+ T+  +L AC HAGL
Sbjct: 610 FDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQM-PDRFTYIGILMACGHAGL 668

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           V++G + F  M N     P  +H +C++D+L RAG LD+A R++N    +A +  W +L 
Sbjct: 669 VEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
            +C   G L +G  +A  LLE E DK   YVLLSN+YA  G W+    +R+++K  G+ K
Sbjct: 729 RSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQK 788

Query: 725 QPGCSWI 731
             GCSWI
Sbjct: 789 DAGCSWI 795



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 289/545 (53%), Gaps = 29/545 (5%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREM-HKLDVRRDNYSFASVLSVCDAG 202
           VFD M  ++L  +NA+++G T NG Y D+ + +F ++    D + DN++F SV+  C  G
Sbjct: 101 VFDNMETKNLIQWNALVSGYTRNGLYGDV-VKVFMDLVSDTDFQPDNFTFPSVIKAC-GG 158

Query: 203 LLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +L+   G  +H +V K G    V V NAL+ MY  CG V +A KVF+       + +S+N
Sbjct: 159 ILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPE--TNLVSWN 216

Query: 261 VMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
            M+   +  G   ++     +ML    L P  +T V+++  C       +G  +H  A+K
Sbjct: 217 SMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK 276

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA--I 374
            G      V+NA + MYS CG ++EA M F +   K++VSWNTMIS ++       A  +
Sbjct: 277 LGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNL 336

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           L  +++Q   ++ +E T  ++L +      +  ++ +H + F +    ++++SNA I AY
Sbjct: 337 LQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH-CFQHVELSNAFILAY 395

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   +  A ++FH +  + + +WN LI G   NG P + L    ++  S  +PD +T+S
Sbjct: 396 AKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTIS 455

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +CA + SL++GK+IHGYVL+N L +   +G ++++ Y  CG    +  +F+ M +K
Sbjct: 456 SLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDK 515

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR- 610
           + +SWNA+IS Y+Q+G   E+++ F+     G I+  +    +V  ACS    +  G   
Sbjct: 516 NLVSWNAMISGYSQNGLPYESLALFRKSLSEG-IQSHEIAIVSVFGACSQLSALRLGKEA 574

Query: 611 ---IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
              +  ++  +  F+        ++D+  ++G + E+ +V +    +  + +W A+  A 
Sbjct: 575 HGYVLKALQTEDAFVGCS-----IIDMYAKSGCIKESRKVFDGLKDKNVA-SWNAIIVAH 628

Query: 668 AAHGN 672
             HG+
Sbjct: 629 GIHGH 633



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 216/419 (51%), Gaps = 15/419 (3%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNA-LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +E GR+LH  V+ S       V+N  LI MY  CG+ +D+  VF+  +    + I +N +
Sbjct: 59  IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNME--TKNLIQWNAL 116

Query: 263 MDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           + G    G   + +  F D++     +P   TF SV+ AC   L  R+G  +H   +K G
Sbjct: 117 VSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMG 176

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V NA + MY  CG +DEA  +F  + E ++VSWN+MI  +++    R +    +
Sbjct: 177 LVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLM 236

Query: 379 EM-QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           EM    G+ PD  T  ++L   A  G +++   IH      G+   + V+NA++  Y+K 
Sbjct: 237 EMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKC 296

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM--SELRPDEYTLSV 492
             + +A   F   + +N+++WNT+I+ F L G   +      E+ +   E++ +E T+  
Sbjct: 297 GYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILN 356

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L +C     LR  K++HGY  + +    + L NA I  YAKCG L+ + +VF+ + +K 
Sbjct: 357 VLPACLDKLQLRSLKELHGYSFR-HCFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKT 415

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
             SWNALI  +AQ+G+ ++A+     M   G+ +PD  T +++L AC+H   +  G  I
Sbjct: 416 VSSWNALIGGHAQNGDPRKALHLLFQMTYSGQ-QPDWFTISSLLLACAHLKSLQYGKEI 473



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 3/246 (1%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNA-LISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           IE    +H FV  +    N  V N  LI  YA       +  +F NM  +N+I WN L++
Sbjct: 59  IETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVS 118

Query: 461 GFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
           G+  NG     ++ F +L+  ++ +PD +T    + +C  I  +R G+ IHG V+K  L+
Sbjct: 119 GYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLV 178

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
             + +GNA++ +Y KCG +D +++VF+ M E + +SWN++I A++++G  +++      M
Sbjct: 179 LDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEM 238

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
                + PD  T   +L  C+  G VD G  I    V   G        + M+ +  + G
Sbjct: 239 LGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVK-LGLSEEVMVNNAMVYMYSKCG 297

Query: 640 YLDEAE 645
           YL+EA+
Sbjct: 298 YLNEAQ 303


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/710 (31%), Positives = 375/710 (52%), Gaps = 48/710 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ +G +  AL  + ++    KL+PD ++  + + +CA + +   G  +H +A+  G ++
Sbjct: 96  LTHNGLFTQALGYYTEMREK-KLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFES 154

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             ++ N ++ +Y    DL + + VF E+ N D  SW                        
Sbjct: 155 DLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSW------------------------ 190

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQ 209
                  N++I+G   NG+ +  + ++ +     +  D ++ +SVL  C + + ++ G  
Sbjct: 191 -------NSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVA 243

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H ++ K G +  V + N L++MYF    + +A +VF  +K  V D +++N M+ G A +
Sbjct: 244 VHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF--SKMAVKDSVTWNTMICGYAQL 301

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           GR E ++  F DM +    P  L+  S + AC      +VG  VH   + SGFE  T   
Sbjct: 302 GRHEASVKLFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I MY+ CG +  A  +F   + KD V+WN++I+ Y Q    +  + ++ +M  +  +
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERK 419

Query: 387 PDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           PD  TF  LL  S F ++ ++     IH  V   G    + + N+L+  YAK   +    
Sbjct: 420 PDSVTFVLLL--SIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLL 477

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  MS  +II+WNT+I   +       G Q  +E+    L PDE T+   L  C+ ++
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
             R GK+IHGY+ K+   S + +GNA+I +Y+KCG L+  ++VF  M EKD ++W ALIS
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A+  +GEGK+A+  F+ M+  G + PD   F A + ACSH+G+V +G R FD M  DY  
Sbjct: 598 AFGMYGEGKKALKAFQDMELSG-VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNL 656

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H +C++DLL R+G L +AE  I S  ++  +  W AL SAC A GN  + + ++ 
Sbjct: 657 EPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSK 716

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +LE   D    YVL+SNIYA  G W++   +R  +K  G+ K+PG SWI
Sbjct: 717 KILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWI 766



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 235/469 (50%), Gaps = 13/469 (2%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +HSL+  SG S  V     LI+ Y    + + +  VF         ++ +N ++  L 
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYL-WNSIIRALT 97

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
             G   +AL  + +M    L+P   TF SV+++C   L   +G  VH  AM+ GFE+   
Sbjct: 98  HNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLY 157

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           + NA I MYS    +D A  +F  +  +D VSWN++IS Y        A+  Y + +  G
Sbjct: 158 IGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTG 217

Query: 385 IRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + PD FT  S+L + G +  V+    +H  +   GI  ++ + N L+S Y K ER+++A 
Sbjct: 218 MVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREAR 277

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  M+ ++ +TWNT+I G+   G     ++ F +++     PD  +++  + +C +  
Sbjct: 278 RVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSG 336

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L+ GK +H Y++ +         N +I +YAKCGDL  +  VF+    KD+++WN+LI+
Sbjct: 337 DLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLIN 396

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y Q G  KE +  FK M+     KPD  TF  +LS  S    ++ G  I   ++  +GF
Sbjct: 397 GYTQSGYYKEGLESFKMMK--MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK-FGF 453

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
                  + +LD+  + G +D+  +V +  ++ A     W    A + H
Sbjct: 454 EAELIIGNSLLDVYAKCGEMDDLLKVFS--YMSAHDIISWNTVIASSVH 500



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 194/396 (48%), Gaps = 13/396 (3%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRN 368
           VH+  + SG       S   I+ Y+       +  +F  +    ++  WN++I       
Sbjct: 41  VHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNG 100

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
           L   A+  Y EM+   ++PD FTF S++ S   I  +E+   +H      G  +++ + N
Sbjct: 101 LFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGN 160

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI  Y++   +  A  +F  MS R+ ++WN+LI+G+  NGF    L  + +  M+ + P
Sbjct: 161 ALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVP 220

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D +T+S  L +C  + +++ G  +HG + K  +   + +GN ++++Y K   L  + RVF
Sbjct: 221 DCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVF 280

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + M  KD+++WN +I  YAQ G  + +V  F  M D     PD  + T+ + AC  +G +
Sbjct: 281 SKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMID--GFVPDMLSITSTIRACGQSGDL 338

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSC--MLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
             G  +   ++   GF    D ++C  ++D+  + G L  A+ V ++   +  S  W +L
Sbjct: 339 QVGKFVHKYLIGS-GF--ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK-DSVTWNSL 394

Query: 664 FSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLS 698
            +     G  + G      + +ER+ D  +  +LLS
Sbjct: 395 INGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLS 430



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 124/227 (54%), Gaps = 5/227 (2%)

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           EF   SLL   +S+     +  +H+ +  +G+  ++  S  LIS YA+ +    +  +F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 446 NMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           ++SP  N+  WN++I     NG   Q L +++E+   +L+PD +T    ++SCARI  L 
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G  +H + ++    S + +GNA+I +Y++  DLD +  VF  M  +D++SWN+LIS Y 
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +G  ++A+  +   +  G + PD  T ++VL AC     V +G  +
Sbjct: 199 SNGFWEDALDMYHKFRMTGMV-PDCFTMSSVLLACGSLMAVKEGVAV 244


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/725 (31%), Positives = 383/725 (52%), Gaps = 46/725 (6%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+L L  N  L+  SR+  ++DA+ LF+++ S+  L PD ++L     ACA + +   G 
Sbjct: 157 KDLFL-YNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGE 215

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +HA AL+AG  +   V N ++++Y                                K G
Sbjct: 216 AVHALALKAGGFSDAFVGNALIAMY-------------------------------GKCG 244

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFAS 194
            V+ A +VF+ M +R+L  +N+++  C+ENG      G+F+ +    +  +  D  +  +
Sbjct: 245 FVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVT 304

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+  C A G +  G  +H L  K G +  V+V N+L+ MY  CG + +A  +F+   G  
Sbjct: 305 VIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGK- 363

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRVGY---Q 309
            + +S+N ++ G +  G         ++M     +R +E+T ++V+ AC          +
Sbjct: 364 -NVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKE 422

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H  A + GF     V+NA +  Y+ C  +D A  +F  ++ K + SWN +I  +AQ   
Sbjct: 423 IHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGF 482

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
              ++  +L M   G+ PD FT GSLL   A   F+   + IH F+  NG+  +  +  +
Sbjct: 483 PGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGIS 542

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+S Y +   +     IF  M  ++++ WN +I GF  N  P + L  F ++L   ++P 
Sbjct: 543 LMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQ 602

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E  ++  L +C+++S+LR GK++H + LK +L     +  A+I +YAKCG ++ S  +F+
Sbjct: 603 EIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFD 662

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            + EKD   WN +I+ Y  HG G +A+  F+ MQ+ G  +PD  TF  VL AC+HAGLV 
Sbjct: 663 RVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGG-RPDSFTFLGVLIACNHAGLVT 721

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G +    M N YG  P  +H +C++D+LGRAG L EA +++N    +  S  W +L S+
Sbjct: 722 EGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSS 781

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  +G+L +G  ++  LLE E +K   YVLLSN+YA  G W+E   +R+ +K  G+ K  
Sbjct: 782 CRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDA 841

Query: 727 GCSWI 731
           GCSWI
Sbjct: 842 GCSWI 846



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 205/726 (28%), Positives = 349/726 (48%), Gaps = 69/726 (9%)

Query: 8   ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYS-------L 60
           +++  ++ T   +L +L+    NL  SG+  DAL+L      SH     + S       +
Sbjct: 44  SSLTSHTKTHSPILQRLH----NLCDSGNLNDALNLL----HSHAQNGTVSSSDISKEAI 95

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
              L AC + +N   G ++HA                + + +K   D+V   R+ +    
Sbjct: 96  GILLRACGHHKNIHVGRKVHAL---------------VSASHKLRNDVVLSTRIIA---- 136

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE- 179
                     SAC   G    +  VFD   ++DL +YNA+++G + N      I LF E 
Sbjct: 137 --------MYSAC---GSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLEL 185

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +   D+  DN++   V   C AG+  +E G  +H+L  K+G      V NALI MY  CG
Sbjct: 186 LSATDLAPDNFTLPCVAKAC-AGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCG 244

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS---LRPSELTF 294
            V  A KVFE  +    + +S+N +M   +  G   E    F+ +L++    L P   T 
Sbjct: 245 FVESAVKVFETMRNR--NLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATM 302

Query: 295 VSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+V+ AC      R+G  VH  A K G     +V+N+ + MYS CG + EA  +F     
Sbjct: 303 VTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGG 362

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLL-ASSGFIEMVEM-- 407
           K++VSWNT+I  Y++    R       EMQ    +R +E T  ++L A SG  +++ +  
Sbjct: 363 KNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKE 422

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH + F +G + +  V+NA ++AYAK   +  A ++F  M  + + +WN LI     NGF
Sbjct: 423 IHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGF 482

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           P + L  F  ++ S + PD +T+   L +CAR+  LR GK+IHG++L+N L     +G +
Sbjct: 483 PGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGIS 542

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +++LY +C  +     +F+ M  K  + WN +I+ ++Q+    EA+  F+ M   G IKP
Sbjct: 543 LMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLS-GGIKP 601

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAER 646
            +   T VL ACS    +  G  +    +  +  +  +  ++C ++D+  + G +++++ 
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHSFALKAH--LSEDAFVTCALIDMYAKCGCMEQSQN 659

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--A 704
           + +  + +     W  + +    HG+  L  I    L++ +  +P  +  L  + A   A
Sbjct: 660 IFDRVN-EKDEAVWNVIIAGYGIHGH-GLKAIELFELMQNKGGRPDSFTFLGVLIACNHA 717

Query: 705 GLWEEA 710
           GL  E 
Sbjct: 718 GLVTEG 723


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/718 (31%), Positives = 373/718 (51%), Gaps = 76/718 (10%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD ++ ++ L  C  LR+   G Q+H+  +  G K    V N ++ +Y    D  S    
Sbjct: 274 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES---- 329

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                             C K         VFD+M +R+   +N++I+   + G+ +  +
Sbjct: 330 ------------------CLK---------VFDEMGERNQVTWNSIISAEAQFGHFNDAL 362

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITM 232
            LF  M +   + + ++  S+L +  AGL + G  R+LH  + ++  +  + + +AL+ M
Sbjct: 363 VLFLRMQESGYKSNRFNLGSIL-MASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDM 421

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSE 291
           Y  CG V +A +VF        + +SYN ++ G    G+ EEAL  + DM     ++P +
Sbjct: 422 YSKCGMVEEAHQVFRSLLER--NEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQ 479

Query: 292 LTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF ++++ C   R    G Q+HA  +++       V    + MYS CG+++ A  IF R
Sbjct: 480 FTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNR 539

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---------- 398
           + E++  SWN+MI  Y Q    + A+  + +MQ  GI+PD F+  S+L+S          
Sbjct: 540 MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKG 599

Query: 399 --------------SGFIEMV---------EMIHAF-VFINGIITNIQVSNALISAYAKN 434
                          G +++V          M +A+ V+   I  ++ ++N ++SA+  +
Sbjct: 600 RELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNS 659

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            R   A  +F  M  RN   WN+++ G+   G   +   HF E+L S++  D  T+   +
Sbjct: 660 GRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 719

Query: 495 SSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           + C+ + +L HG Q+H  ++K   ++  + L  A++ +Y+KCG +  +  VF+ M  K+ 
Sbjct: 720 NLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNI 779

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWNA+IS Y++HG  KEA+  ++ M   G + P++ TF A+LSACSH GLV++G RIF 
Sbjct: 780 VSWNAMISGYSKHGCSKEALILYEEMPKKG-MYPNEVTFLAILSACSHTGLVEEGLRIFT 838

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           SM  DY      +H +CM+DLLGRAG L++A+  +    I+     W AL  AC  H ++
Sbjct: 839 SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDM 898

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +GR+ A  L E +   P  YV++SNIYAAAG W+E  +IR+++K  GV K PG SWI
Sbjct: 899 DMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 956



 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 164/543 (30%), Positives = 296/543 (54%), Gaps = 23/543 (4%)

Query: 120 NPDVYSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTE-NGYEDIGIG 175
           NPD Y  T  L    + G +D   YA ++F++MP+R+L  +N MI      + Y ++ + 
Sbjct: 103 NPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEV-LR 161

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMY 233
           L+  M       D ++F SV+  C A + + G  RQL S V K+G +C + V  AL+  Y
Sbjct: 162 LYGRMRGSGNFSDKFTFPSVIKACIA-MEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGY 220

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G + DA    +E +G     +++N ++ G   +   EEA   F  ML   + P   T
Sbjct: 221 ARFGWMDDAVTSLDEIEGTSV--VTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFT 278

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-IFARL 349
           F S +  C   R    G QVH++ +  GF+  T V NA I MY+ C   +E+C+ +F  +
Sbjct: 279 FASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDD-EESCLKVFDEM 337

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS-LLASSGFIEMVE-- 406
            E++ V+WN++IS  AQ      A++ +L MQ  G + + F  GS L+AS+G  ++ +  
Sbjct: 338 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGR 397

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H  +  N + ++I + +AL+  Y+K   +++A+Q+F ++  RN +++N L+ G++  G
Sbjct: 398 ELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEG 457

Query: 467 FPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
              + L+ + ++   + ++PD++T +  L+ CA   +   G+QIH ++++ N+   + + 
Sbjct: 458 KAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
             ++ +Y++CG L+ +  +FN M E++  SWN++I  Y Q+GE +EA+  FK MQ  G I
Sbjct: 518 TELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG-I 576

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLGRAGYLDEA 644
           KPD  + +++LS+C        G  + + +V +   +  E  L  +L D+  + G +D A
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT--MEEEGILQVVLVDMYAKCGSMDYA 634

Query: 645 ERV 647
            +V
Sbjct: 635 WKV 637



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 233/464 (50%), Gaps = 14/464 (3%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC---KVFE 247
           ++S++  C D+   + G+ +H+ +  +G++    ++  ++ +Y   G + D C   K+FE
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRV 306
           E      +  ++N M+   A V    E L  +  M  +     + TF SV+ AC+    +
Sbjct: 134 EMPER--NLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191

Query: 307 G--YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           G   Q+ +  +K+G      V  A +  Y+  G +D+A      ++   +V+WN +I+ Y
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNI 421
            +      A   +  M  +G+ PD FTF S L   G +   +    +H+ +   G   + 
Sbjct: 252 VKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDT 311

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V NALI  YAK +  +   ++F  M  RN +TWN++I+     G     L  F  +  S
Sbjct: 312 FVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQES 371

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             + + + L   L + A ++ +  G+++HG++++N L S + LG+A++ +Y+KCG ++ +
Sbjct: 372 GYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEA 431

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            +VF  ++E++ +S+NAL++ Y Q G+ +EA+  +  MQ    I+PDQ TFT +L+ C++
Sbjct: 432 HQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN 491

Query: 602 AGLVDDGTRIFDSMV--NDYGFIPAEDHLSCMLDLLGRAGYLDE 643
               + G +I   ++  N    I  E  L  M    GR  Y  E
Sbjct: 492 QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 535



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 193/416 (46%), Gaps = 65/416 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA   + G  ++AL L+  + S   ++PD ++ +T L  CAN RN   G Q+HA+ +
Sbjct: 447 NALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 506

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           RA +     V   ++ +Y     L   K +F+ +   + YSW                  
Sbjct: 507 RANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSW------------------ 548

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                        N+MI G  +NG     + LF++M    ++ D +S +S+LS C     
Sbjct: 549 -------------NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSD 595

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHIS--- 258
            + GR+LH+ + ++       +   L+ MY  CG++  A KV+++   K  + +++    
Sbjct: 596 SQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSA 655

Query: 259 ------------------------YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
                                   +N ++ G A+ G  +E+   F +ML + +    LT 
Sbjct: 656 FVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTM 715

Query: 295 VSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSV-SNAAITMYSSCGKIDEACMIFARLQ 350
           V++++ C   P +  G Q+H+  +K GF   + V   A + MYS CG I +A  +F  + 
Sbjct: 716 VTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMN 775

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            K+IVSWN MIS Y++    + A++ Y EM   G+ P+E TF ++L++     +VE
Sbjct: 776 GKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVE 831



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 187/371 (50%), Gaps = 17/371 (4%)

Query: 292 LTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC---MI 345
           L + S++  C+     + G  +H Q + +G+     +    + +Y+  G +D+ C    +
Sbjct: 72  LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKL 131

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE-- 403
           F  + E+++ +WNTMI  YA+ +     +  Y  M+  G   D+FTF S++ +   +E  
Sbjct: 132 FEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDM 191

Query: 404 -MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
             V  + + V   G+  N+ V  AL+  YA+   +  A      +   +++TWN +I G+
Sbjct: 192 GGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGY 251

Query: 463 --LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
             +L+     G+  F  +L   + PD +T + AL  C  + S   GKQ+H  ++      
Sbjct: 252 VKILSWEEAWGI--FDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKG 309

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              +GNA+I +YAKC D +  L+VF+ M E++ ++WN++ISA AQ G   +A+  F  MQ
Sbjct: 310 DTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQ 369

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAG 639
           + G  K ++    ++L A +    +  G  +   +V +   + ++  L S ++D+  + G
Sbjct: 370 ESG-YKSNRFNLGSILMASAGLADIGKGRELHGHLVRN--LLNSDIILGSALVDMYSKCG 426

Query: 640 YLDEAERVINS 650
            ++EA +V  S
Sbjct: 427 MVEEAHQVFRS 437



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 23/175 (13%)

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD- 539
           S++ P  Y  S  +  C   +S + GK IH  ++ N       L   ++ LYA+ G LD 
Sbjct: 67  SDVNPLPY--SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124

Query: 540 -CSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            C  R +F  M E++  +WN +I AYA+  +  E +  +  M+  G    D+ TF +V+ 
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFS-DKFTFPSVIK 183

Query: 598 ACSHAGLVD-DGTRIFDSMVNDYGFIPAEDHLSC-------MLDLLGRAGYLDEA 644
           AC    + D  G R   S V   G       L+C       ++D   R G++D+A
Sbjct: 184 AC--IAMEDMGGVRQLQSSVVKAG-------LNCNLFVGGALVDGYARFGWMDDA 229


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 372/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L   G   D+++LF ++ +   + P+ ++L+T L AC+       G Q+HA A + G
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNE-GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V + ++ LY                                K G ++ A ++F 
Sbjct: 244 LLLDLFVGSALVDLY-------------------------------AKCGEIELASKMFI 272

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            MP+++   +N ++ G  + G     + LF  M +LDV+ + ++  +VL  C ++  L+ 
Sbjct: 273 GMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQ 332

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +HSL+ K G+     +   L+ MY  CG  +DA  VF+  K    D + ++ ++  L
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKP--DIVVWSALITCL 390

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
              G+ EE++  F  M +    P++ T  S++SA       + G  +HA   K GFE   
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDV 450

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +VSNA +TMY   G + +   ++  + ++D++SWN  +S      +    +  +  M   
Sbjct: 451 AVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE 510

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G  P+ +TF S+L S   +  V     +HA +  N +  N  V  ALI  YAK   ++ A
Sbjct: 511 GFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
              F+ +S R++ TW  +I  +       + L +F ++    ++P+E+TL+  LS C+ +
Sbjct: 571 DVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSL 630

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +SL  G+Q+H  V K+  +S M +G+A++ +YAKCG ++ +  +F  +I +DTI+WN +I
Sbjct: 631 ASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTII 690

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YAQ+G+G +A++ F+ M D G I PD  TFT +LSACSH GLV++G   F+SM  D+G
Sbjct: 691 CGYAQNGQGNKALTAFRMMLDEG-ISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG 749

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  DH +CM+D+LGR G  DE E  I    +   +  W  +  A   H NL LG   A
Sbjct: 750 ISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAA 809

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L E + ++ S Y+LLSNI+A  G W++   +R L+   GV K+PGCSW+
Sbjct: 810 NKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWV 860



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 304/588 (51%), Gaps = 20/588 (3%)

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV----FSEIQNPDVYSWTTF 129
           A GNQ+  ++ +  LK Y    +++L    + R L   K +      ++ NPD + W + 
Sbjct: 99  AKGNQV-CWSSKKKLKYY----SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSL 153

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           ++   K  +  YA  V  KMPDRD+  + A+I G    G+ +  I LF+EM    +  + 
Sbjct: 154 VNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNE 213

Query: 190 YSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           ++ A+ L  C   + L+ G+Q+H+   K G    + V +AL+ +Y  CG +  A K+F  
Sbjct: 214 FTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIG 273

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---R 305
                 + +++NV+++G A  G V   L  F  M+   ++ +E T  +V+  C      +
Sbjct: 274 MPEQ--NDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLK 331

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G  +H+  +K G+E    +    + MYS CG   +A  +F  +++ DIV W+ +I+   
Sbjct: 332 QGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLD 391

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQ 422
           Q+     +I  +  M+     P+++T  SLL++   +G ++  + IHA V+  G  T++ 
Sbjct: 392 QQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVA 451

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           VSNAL++ Y KN  +    +++ +M  R++I+WN  ++G    G   + L  F  +L   
Sbjct: 452 VSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEG 511

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
             P+ YT    L SC+ +  + +G+Q+H +++KN L     +  A+I +YAKC  L+ + 
Sbjct: 512 FIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDAD 571

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
             FN +  +D  +W  +I+ YAQ  +G++A++ F+ MQ  G +KP++ T    LS CS  
Sbjct: 572 VAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-VKPNEFTLAGCLSGCSSL 630

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             ++ G ++  SMV   G +      S ++D+  + G ++EAE +  +
Sbjct: 631 ASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEA 677



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 164/598 (27%), Positives = 279/598 (46%), Gaps = 49/598 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L   ++ G     L LF  +     +K + ++L+T L  CAN +N   G  +H+  +
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMEL-DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +    +   ++ +Y      +    VF  I+ PD+  W+                 
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWS----------------- 384

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                         A+IT   + G  +  I LF  M   D   + Y+  S+LS   + G 
Sbjct: 385 --------------ALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L++G+ +H+ V K GF   V+V NAL+TMY   G V D  K++E       D IS+N  +
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR--DLISWNAYL 488

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
            GL   G  +  L  F  ML     P+  TF+S++ +C C      G QVHA  +K+  +
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ C  +++A + F RL  +D+ +W  +I+ YAQ N G  A+  + +M
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G++P+EFT    L   +S   +E  + +H+ VF +G ++++ V +AL+  YAK   +
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCM 668

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           ++A  +F  +  R+ I WNT+I G+  NG   + L  F  +L   + PD  T +  LS+C
Sbjct: 669 EEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVF--NMMIEKDTI 554
           +    +  GK+    + ++  IS      A M+ +  + G  D  L  F   M + ++ +
Sbjct: 729 SHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD-ELEDFIQKMQLSQNAL 787

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
            W  ++ A   H      V   KA   +  ++P++ +   +LS   +  G  DD  R+
Sbjct: 788 IWETVLGASKMH---NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 251/521 (48%), Gaps = 31/521 (5%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           ++S+L  C +   L   + +H L+ K        V+N    ++ +  NV   C+    A+
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKD-------VINPDSHLWVSLVNVYAKCRYSAYAR 167

Query: 251 GYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCP 304
             +      D +S+  ++ GL + G   +++  F++M    + P+E T  + + AC LC 
Sbjct: 168 LVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCM 227

Query: 305 --RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+HAQA K G      V +A + +Y+ CG+I+ A  +F  + E++ V+WN +++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            YAQR      +  +  M  + ++ +EFT  ++L   A+S  ++  ++IH+ +   G   
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N  +   L+  Y+K      A  +F  +   +I+ W+ LI      G   + ++ F  + 
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           + +  P++YT+   LS+     +L++G+ IH  V K    + +++ NA++T+Y K G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
              +++  M+++D ISWNA +S     G     ++ F  M + G I P+  TF ++L +C
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI-PNMYTFISILGSC 526

Query: 600 SHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           S    V  G +    I  + ++D  F+      + ++D+  +  YL++A+   N   +  
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFV-----CTALIDMYAKCMYLEDADVAFN--RLSV 579

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R    W +     A  N     +     +++E  KP+ + L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 179/412 (43%), Gaps = 56/412 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+ L   G Y   L +F  +       P++Y+  + L +C+ L +  +G Q+H
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ ++  L     V   ++ +Y                            + C  +   D
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMY----------------------------AKCMYLEDAD 571

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A   F+++  RDL  +  +IT   +    +  +  FR+M +  V+ + ++ A  LS C 
Sbjct: 572 VA---FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   LE G+QLHS+V KSG    + V +AL+ MY  CG + +A  +FE       D I++
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR--DTIAW 686

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM 315
           N ++ G A  G+  +AL  FR ML   + P  +TF  ++SA  C   G     + H  +M
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA--CSHQGLVEEGKEHFNSM 744

Query: 316 KSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN---L 369
              F    +V + A  + +    GK DE      ++Q  ++ + W T++      N   L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804

Query: 370 GRSAILAYLEMQSVGIRPDE----FTFGSLLASSGFIEMVEMIHAFVFINGI 417
           G  A     E+Q     P+E        ++ A+ G  + V+ + + +   G+
Sbjct: 805 GEKAANKLFELQ-----PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGV 851


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 372/711 (52%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L   G   D+++LF ++ +   + P+ ++L+T L AC+       G Q+HA A + G
Sbjct: 185 IQGLVAEGFANDSIYLFQEMQNE-GIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLG 243

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V + ++ LY                                K G ++ A ++F 
Sbjct: 244 LLLDLFVGSALVDLY-------------------------------AKCGEIELASKMFI 272

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            MP+++   +N ++ G  + G     + LF  M +LDV+ + ++  +VL  C ++  L+ 
Sbjct: 273 GMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQ 332

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +HSL+ K G+     +   L+ MY  CG  +DA  VF+  K    D + ++ ++  L
Sbjct: 333 GQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKP--DIVVWSALITCL 390

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
              G+ EE++  F  M +    P++ T  S++SA       + G  +HA   K GFE   
Sbjct: 391 DQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDV 450

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +VSNA +TMY   G + +   ++  + ++D++SWN  +S      +    +  +  M   
Sbjct: 451 AVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE 510

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G  P+ +TF S+L S   +  V     +HA +  N +  N  V  ALI  YAK   ++ A
Sbjct: 511 GFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDA 570

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
              F+ +S R++ TW  +I  +       + L +F ++    ++P+E+TL+  LS C+ +
Sbjct: 571 DVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSL 630

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +SL  G+Q+H  V K+  +S M +G+A++ +YAKCG ++ +  +F  +I +DTI+WN +I
Sbjct: 631 ASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTII 690

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YAQ+G+G +A++ F+ M D G I PD  TFT +LSACSH GLV++G   F+SM  D+G
Sbjct: 691 CGYAQNGQGNKALTAFRMMLDEG-ISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG 749

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  DH +CM+D+LGR G  DE E  I    +   +  W  +  A   H NL LG   A
Sbjct: 750 ISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAA 809

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L E + ++ S Y+LLSNI+A  G W++   +R L+   GV K+PGCSW+
Sbjct: 810 NKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWV 860



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 285/544 (52%), Gaps = 11/544 (2%)

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +  ++ NPD + W + ++   K  +  YA  V  KMPDRD+  + A+I G    G+ +  
Sbjct: 138 IVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDS 197

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           I LF+EM    +  + ++ A+ L  C   + L+ G+Q+H+   K G    + V +AL+ +
Sbjct: 198 IYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDL 257

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  CG +  A K+F        + +++NV+++G A  G V   L  F  M+   ++ +E 
Sbjct: 258 YAKCGEIELASKMFIGMPEQ--NDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEF 315

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  +V+  C      + G  +H+  +K G+E    +    + MYS CG   +A  +F  +
Sbjct: 316 TLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVE 406
           ++ DIV W+ +I+   Q+     +I  +  M+     P+++T  SLL++   +G ++  +
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IHA V+  G  T++ VSNAL++ Y KN  +    +++ +M  R++I+WN  ++G    G
Sbjct: 436 SIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCG 495

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L  F  +L     P+ YT    L SC+ +  + +G+Q+H +++KN L     +  
Sbjct: 496 MYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCT 555

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+I +YAKC  L+ +   FN +  +D  +W  +I+ YAQ  +G++A++ F+ MQ  G +K
Sbjct: 556 ALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEG-VK 614

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P++ T    LS CS    ++ G ++  SMV   G +      S ++D+  + G ++EAE 
Sbjct: 615 PNEFTLAGCLSGCSSLASLEGGQQL-HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEA 673

Query: 647 VINS 650
           +  +
Sbjct: 674 LFEA 677



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 164/598 (27%), Positives = 279/598 (46%), Gaps = 49/598 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L   ++ G     L LF  +     +K + ++L+T L  CAN +N   G  +H+  +
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMEL-DVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +    +   ++ +Y      +    VF  I+ PD+  W+                 
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWS----------------- 384

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                         A+IT   + G  +  I LF  M   D   + Y+  S+LS   + G 
Sbjct: 385 --------------ALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L++G+ +H+ V K GF   V+V NAL+TMY   G V D  K++E       D IS+N  +
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDR--DLISWNAYL 488

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
            GL   G  +  L  F  ML     P+  TF+S++ +C C      G QVHA  +K+  +
Sbjct: 489 SGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLD 548

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ C  +++A + F RL  +D+ +W  +I+ YAQ N G  A+  + +M
Sbjct: 549 DNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQM 608

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G++P+EFT    L   +S   +E  + +H+ VF +G ++++ V +AL+  YAK   +
Sbjct: 609 QQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCM 668

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           ++A  +F  +  R+ I WNT+I G+  NG   + L  F  +L   + PD  T +  LS+C
Sbjct: 669 EEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVF--NMMIEKDTI 554
           +    +  GK+    + ++  IS      A M+ +  + G  D  L  F   M + ++ +
Sbjct: 729 SHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFD-ELEDFIQKMQLSQNAL 787

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
            W  ++ A   H      V   KA   +  ++P++ +   +LS   +  G  DD  R+
Sbjct: 788 IWETVLGASKMH---NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRV 842



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/521 (24%), Positives = 251/521 (48%), Gaps = 31/521 (5%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           ++S+L  C +   L   + +H L+ K        V+N    ++ +  NV   C+    A+
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKD-------VINPDSHLWVSLVNVYAKCRYSAYAR 167

Query: 251 GYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCP 304
             +      D +S+  ++ GL + G   +++  F++M    + P+E T  + + AC LC 
Sbjct: 168 LVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCM 227

Query: 305 --RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+HAQA K G      V +A + +Y+ CG+I+ A  +F  + E++ V+WN +++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            YAQR      +  +  M  + ++ +EFT  ++L   A+S  ++  ++IH+ +   G   
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N  +   L+  Y+K      A  +F  +   +I+ W+ LI      G   + ++ F  + 
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMR 407

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           + +  P++YT+   LS+     +L++G+ IH  V K    + +++ NA++T+Y K G + 
Sbjct: 408 LGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVH 467

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
              +++  M+++D ISWNA +S     G     ++ F  M + G I P+  TF ++L +C
Sbjct: 468 DGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFI-PNMYTFISILGSC 526

Query: 600 SHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           S    V  G +    I  + ++D  F+      + ++D+  +  YL++A+   N   +  
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFV-----CTALIDMYAKCMYLEDADVAFN--RLSV 579

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R    W +     A  N     +     +++E  KP+ + L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 179/412 (43%), Gaps = 56/412 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+ L   G Y   L +F  +       P++Y+  + L +C+ L +  +G Q+H
Sbjct: 481 LISWNAYLSGLHDCGMYDRPLTIFYHM-LEEGFIPNMYTFISILGSCSCLFDVHYGRQVH 539

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ ++  L     V   ++ +Y                            + C  +   D
Sbjct: 540 AHIIKNQLDDNNFVCTALIDMY----------------------------AKCMYLEDAD 571

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A   F+++  RDL  +  +IT   +    +  +  FR+M +  V+ + ++ A  LS C 
Sbjct: 572 VA---FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCS 628

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   LE G+QLHS+V KSG    + V +AL+ MY  CG + +A  +FE       D I++
Sbjct: 629 SLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRR--DTIAW 686

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM 315
           N ++ G A  G+  +AL  FR ML   + P  +TF  ++SA  C   G     + H  +M
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSA--CSHQGLVEEGKEHFNSM 744

Query: 316 KSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN---L 369
              F    +V + A  + +    GK DE      ++Q  ++ + W T++      N   L
Sbjct: 745 YRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVL 804

Query: 370 GRSAILAYLEMQSVGIRPDE----FTFGSLLASSGFIEMVEMIHAFVFINGI 417
           G  A     E+Q     P+E        ++ A+ G  + V+ + + +   G+
Sbjct: 805 GEKAANKLFELQ-----PEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGV 851


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 238/729 (32%), Positives = 396/729 (54%), Gaps = 35/729 (4%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKP--DIYSLSTTLAACANLRNAAF 75
           KE  L   +S ++L+ +   +   ++ V++ SS K+    ++  L   +    + +N+ F
Sbjct: 89  KEYELFSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNF 148

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS----WTTFLS 131
              L AY              +IL L    + +   +RV S I++  V          + 
Sbjct: 149 --DLGAYC-------------SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVF 193

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
              K G +     VFDK+ +  + ++N MI+  + +G     I LF++M +L ++ ++Y+
Sbjct: 194 MYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYT 253

Query: 192 FASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           F+S+L  C A +  +E GRQ+H L+ K GF+   +VVN+LI+ YF    V  A K+F+E 
Sbjct: 254 FSSILK-CFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDEL 312

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
                D IS+N M+ G    G  +  +  F  MLV  +     T V+V  AC       +
Sbjct: 313 TDR--DVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLL 370

Query: 307 GYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           G  +H+ ++K+   +     +N  + MYS CG ++ A  +F R+ EK +VSW +MI+ Y 
Sbjct: 371 GKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYV 430

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
           +  L   AI  + EM+S G+ PD +   S+L   A +G ++  +++H ++  N + TN  
Sbjct: 431 REGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSF 490

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           VSNAL   YAK   +K A+ +F +M  +++I+WNT+I G+  N  P + L  F+E+   E
Sbjct: 491 VSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEM-QRE 549

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
            +PD  T++  L +CA +++L  G++IHGY L+N       + NA++ +Y KCG L  + 
Sbjct: 550 SKPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLAR 609

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+M+  KD +SW  +I+ Y  HG G EA++ F  M+  G I+PD+ +F ++L ACSH+
Sbjct: 610 SLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTG-IEPDEVSFISILYACSHS 668

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GL+D+G +IF+ M  +    P  +H +CM+DLL R G L +A + I +  I+  +  W A
Sbjct: 669 GLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGA 728

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L   C  H +++L   +A  + E E +    YVLL+NIYA A  WEE   +R+ + + G+
Sbjct: 729 LLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGL 788

Query: 723 IKQPGCSWI 731
            K PGCSWI
Sbjct: 789 KKNPGCSWI 797


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 231/717 (32%), Positives = 378/717 (52%), Gaps = 42/717 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  L   SR    Q+ALHLFV ++ S  L PD Y++S  L+ CA   N   G Q+H
Sbjct: 67  LKQHNQLLFRYSRCDQTQEALHLFVSLYRS-GLSPDSYTMSCVLSVCAGSFNGTVGEQVH 125

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ GL  +  V N+++ +Y    ++   +RVF E+ + DV SW              
Sbjct: 126 CQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSW-------------- 171

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVC 199
                            N+++TG + N + D    LF  M     R D Y+ ++V+ ++ 
Sbjct: 172 -----------------NSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALA 214

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G +  G Q+H+LV K GF     V N+LI+M    G + DA  VF+  +    D +S+
Sbjct: 215 NQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENK--DSVSW 272

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
           N M+ G    G+  EA   F +M +A  +P+  TF SV+ +C   +   +   +H + +K
Sbjct: 273 NSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLK 332

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAIL 375
           SG     +V  A +   + C +ID+A  +F+ +   + +VSW  MIS Y Q      A+ 
Sbjct: 333 SGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVN 392

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            +  M+  G++P+ FT+ ++L     + + E IHA V       +  V  AL+ A+ K  
Sbjct: 393 LFSLMRREGVKPNHFTYSTILTVQHAVFISE-IHAEVIKTNYEKSSSVGTALLDAFVKIG 451

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A ++F  +  +++I W+ ++ G+   G   +  + F +L    ++P+E+T    ++
Sbjct: 452 NISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIIN 511

Query: 496 SC-ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           +C A  +S+  GKQ H Y +K  L + + + ++++TLYAK G+++ +  +F    E+D +
Sbjct: 512 ACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLV 571

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++IS YAQHG+ K+A+  F+ MQ    ++ D  TF  V+SAC+HAGLV  G   F+ 
Sbjct: 572 SWNSMISGYAQHGQAKKALEVFEEMQK-RNLEVDAITFIGVISACAHAGLVGKGQNYFNI 630

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M+ND+   P  +H SCM+DL  RAG L +A  +IN       +  W  + +A   H N+ 
Sbjct: 631 MINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIE 690

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LG++ A  ++  E    + YVLLSNIYAAAG W E  N+R+L+ +  V K+PG SWI
Sbjct: 691 LGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWI 747



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 162/569 (28%), Positives = 284/569 (49%), Gaps = 26/569 (4%)

Query: 120 NPDVYSWTTFLSACTKMGHVD--YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           NP + S    L+A T +   D  +A ++FD+ P RDL  +N ++   +        + LF
Sbjct: 31  NPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLF 90

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             +++  +  D+Y+ + VLSVC AG      G Q+H    K G    +SV N+L+ MY  
Sbjct: 91  VSLYRSGLSPDSYTMSCVLSVC-AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTK 149

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
            GNV D  +VF+E      D +S+N ++ G +     ++    F  M V   RP   T  
Sbjct: 150 TGNVRDGRRVFDEMGDR--DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVS 207

Query: 296 SVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           +V++A        +G Q+HA  +K GFE    V N+ I+M S  G + +A ++F  ++ K
Sbjct: 208 TVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENK 267

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIH 409
           D VSWN+MI+ +        A   +  MQ  G +P   TF S++ S   ++   +V ++H
Sbjct: 268 DSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLH 327

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFP 468
                +G+ TN  V  AL+ A  K + I  A+ +F  M   +++++W  +I+G+L NG  
Sbjct: 328 CKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDT 387

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG---KQIHGYVLKNNLISKMSLG 525
            Q +  FS +    ++P+ +T S  L       +++H     +IH  V+K N     S+G
Sbjct: 388 DQAVNLFSLMRREGVKPNHFTYSTIL-------TVQHAVFISEIHAEVIKTNYEKSSSVG 440

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            A++  + K G++  +++VF ++  KD I+W+A+++ YAQ GE +EA   F  +   G I
Sbjct: 441 TALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREG-I 499

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KP++ TF ++++AC+      +  + F +         A    S ++ L  + G ++ A 
Sbjct: 500 KPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAH 559

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLR 674
            +   Q  +    +W ++ S  A HG  +
Sbjct: 560 EIFKRQK-ERDLVSWNSMISGYAQHGQAK 587



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 192/389 (49%), Gaps = 11/389 (2%)

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           YQ+H  A     +++    NA   +  S  +   A  +F +   +D+   N ++  Y++ 
Sbjct: 24  YQLHCHA-NPLLQSHVVALNARTLLRDSDPRF--AQQLFDQTPLRDLKQHNQLLFRYSRC 80

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLA--SSGFIEMV-EMIHAFVFINGIITNIQVS 424
           +  + A+  ++ +   G+ PD +T   +L+  +  F   V E +H      G++ ++ V 
Sbjct: 81  DQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVG 140

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+L+  Y K   ++   ++F  M  R++++WN+L+ G+  N F  Q  + F  + +   R
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD YT+S  +++ A   ++  G QIH  V+K    ++  + N++I++ +K G L  +  V
Sbjct: 201 PDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVV 260

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M  KD++SWN++I+ +  +G+  EA   F  MQ  G  KP  ATF +V+ +C  A L
Sbjct: 261 FDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAG-AKPTHATFASVIKSC--ASL 317

Query: 605 VDDG-TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
            + G  R+        G    ++ L+ ++  L +   +D+A  + +  H      +W A+
Sbjct: 318 KELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAM 377

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPS 692
            S    +G+      +   L+ RE  KP+
Sbjct: 378 ISGYLQNGDTDQAVNLFS-LMRREGVKPN 405


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/610 (34%), Positives = 342/610 (56%), Gaps = 11/610 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRD 188
           L    K GH++ A ++FDKM  RD   +  +I+G          + LF +M  +  +  D
Sbjct: 8   LKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMD 67

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +  +  L  C   + + FG  LH    K+ F   V V +AL+ MY   G V + C VF+
Sbjct: 68  PFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFK 127

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CP 304
           E    + + +S+  ++ GL   G  +EAL  F DM +  +     TF S + AC      
Sbjct: 128 EMP--LRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGAL 185

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G ++H Q +K GF A + V+N   TMY+ CGK+D    +F  + ++D+VSW T+I + 
Sbjct: 186 NYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSN 245

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
            Q     +A+ A+  M+   + P+EFTF +++   A+ G IE  E +HA V   G++ ++
Sbjct: 246 VQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSL 305

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+N++++ Y+K  ++  A  +F  +S R+II+W+T+I+G+   G   +   + S +   
Sbjct: 306 SVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRRE 365

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             RP+E+  +  LS C  ++ L  GKQ+H +VL   L     + +A+I +Y+KCG +  +
Sbjct: 366 GPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEA 425

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F+     + +SW A+I+ YA+HG  +EA+  FK +  VG ++PD  TF AVL+ACSH
Sbjct: 426 SKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVG-LRPDSVTFIAVLAACSH 484

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGLVD G   F+S+   +   P++DH  CM+DLL RAG L++AE +I S   Q     W 
Sbjct: 485 AGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWS 544

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HG++  G+  A  +L+ + +    ++ L+N+YAA G W+EAA +R+++K  G
Sbjct: 545 TLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKG 604

Query: 722 VIKQPGCSWI 731
           V+K+PG SWI
Sbjct: 605 VVKEPGWSWI 614



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/563 (30%), Positives = 272/563 (48%), Gaps = 49/563 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++     L  D + LS  L AC    + +FG  LH Y+++        V + +
Sbjct: 50  EALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSAL 109

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + +Y                                K+G VD  C VF +MP R++  + 
Sbjct: 110 VDMY-------------------------------MKIGKVDEGCIVFKEMPLRNVVSWT 138

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           A+I G    GY    +  F +M    V  D Y+F+S L  C D+G L +GR++H    K 
Sbjct: 139 AIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKK 198

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF+ +  V N L TMY  CG +    ++FE       D +S+  ++     +G+ E A+ 
Sbjct: 199 GFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQR--DVVSWTTIIMSNVQIGQEENAVK 256

Query: 278 RFRDMLVASLRPSELTFVSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            FR M    + P+E TF +V+S C    R+  G Q+HA  ++ G     SV+N+ + MYS
Sbjct: 257 AFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYS 316

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C ++D A  +F  L  +DI+SW+TMIS YAQ   G  A      M+  G RP+EF F S
Sbjct: 317 KCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFAS 376

Query: 395 LLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L+  G    +E  + +HA V   G+  N  V +ALI+ Y+K   IK+A +IF      N
Sbjct: 377 VLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNN 436

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           I++W  +ING+  +G+  + +  F +L    LRPD  T    L++C+    +  G     
Sbjct: 437 IVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFN 496

Query: 512 YVLKNNLI--SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
            + K + I  SK   G  MI L  + G L D    + +M  ++D + W+ L+ A   HG+
Sbjct: 497 SLSKVHQICPSKDHYG-CMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGD 555

Query: 569 GKEAVSCFK-AMQDVGRIKPDQA 590
               V C K A + + ++ P+ A
Sbjct: 556 ----VDCGKRAAEKILQLDPNCA 574



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 220/464 (47%), Gaps = 51/464 (10%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           KE+ L+  +S    +A L R+G+ ++AL  F  +    K+  D Y+ S+ L ACA+    
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWI-QKVGCDTYTFSSALKACADSGAL 185

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            +G ++H   L+ G  A   VANT+ ++Y     L    R+F  +   DV SWTT + + 
Sbjct: 186 NYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSN 245

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            ++G  + A + F +M                                + DV  + ++FA
Sbjct: 246 VQIGQEENAVKAFRRM-------------------------------RETDVSPNEFTFA 274

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +V+S C   G +E+G QLH+ V + G    +SV N+++ MY  C  +  A  VF+     
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR 334

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
             D IS++ M+ G A  G  EEA      M     RP+E  F SV+S C        G Q
Sbjct: 335 --DIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQ 392

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA  +  G E  T V +A I MYS CG I EA  IF   +  +IVSW  MI+ YA+   
Sbjct: 393 LHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGY 452

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA--- 426
            + AI  + ++  VG+RPD  TF ++LA+     +V++   F + N +    Q+  +   
Sbjct: 453 SQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDL--GFHYFNSLSKVHQICPSKDH 510

Query: 427 ---LISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
              +I    +  R+  A  +  +M   R+ + W+TL+    ++G
Sbjct: 511 YGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHG 554



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 175/362 (48%), Gaps = 57/362 (15%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S T ++++    I ++N+ + G  ++A+  F ++  +  + P+ ++ +  ++ CA L   
Sbjct: 229 SMTQRDVVSWTTIIMSNV-QIGQEENAVKAFRRMRET-DVSPNEFTFAAVISGCATLGRI 286

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            +G QLHA+ +R GL     VAN+I+++Y     L     VF  +   D+ SW+T +S  
Sbjct: 287 EWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGY 346

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            +                           GC E  ++         M +   R + ++FA
Sbjct: 347 AQ--------------------------GGCGEEAFD-----YLSWMRREGPRPNEFAFA 375

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           SVLSVC +  +LE G+QLH+ V   G      V +ALI MY  CG++ +A K+F+EA+  
Sbjct: 376 SVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAE-- 433

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA 312
             + +S+  M++G A  G  +EA+  F+ +    LRP  +TF++V++AC         HA
Sbjct: 434 YNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAAC--------SHA 485

Query: 313 QAMKSGFEAYTSVSNA------------AITMYSSCGKIDEA-CMIFARLQEKDIVSWNT 359
             +  GF  + S+S               I +    G++++A  MI +   ++D V W+T
Sbjct: 486 GLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWST 545

Query: 360 MI 361
           ++
Sbjct: 546 LL 547



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 119/231 (51%), Gaps = 3/231 (1%)

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           +Q  N ++    K   +  A Q+F  M  R+ I+W T+I+G++      + L  FS++ +
Sbjct: 1   MQEINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60

Query: 481 SE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              L  D + LS+AL +C    S+  G+ +HGY +K + ++ + +G+A++ +Y K G +D
Sbjct: 61  EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               VF  M  ++ +SW A+I+   + G  KEA++ F  M  + ++  D  TF++ L AC
Sbjct: 121 EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMW-IQKVGCDTYTFSSALKAC 179

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           + +G ++ G  I    +   GF       + +  +  + G LD   R+  S
Sbjct: 180 ADSGALNYGREIHCQTLKK-GFTAVSFVANTLATMYNKCGKLDYGLRLFES 229


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/710 (32%), Positives = 374/710 (52%), Gaps = 42/710 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   SR G  Q+A  LF+ IH    ++ D    S+ L   A L +  FG QLH   ++ G
Sbjct: 65  LFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V  +++  Y    +    ++VF                               D
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVF-------------------------------D 152

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
           +M +R++  +  +I+G   N   D  + LF  M     + ++++FA+ L V  + G+   
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H++V K+G    + V N+LI +Y  CGNV  A  +F++ +  V   +++N M+ G 
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE--VKSVVTWNSMISGY 270

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
           A+ G   EAL  F  M +  +R SE +F SV+  C      R   Q+H   +K GF    
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           ++  A +  YS C  + +A  +F  +    ++VSW  MIS + Q +    A+  + EM+ 
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            G+RP+EFT+  +L +   I   E +HA V       +  V  AL+ AY K  ++++A +
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI-S 501
           +F  +  ++I+ W+ ++ G+   G     ++ F EL    ++P+E+T S  L+ CA   +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           S+  GKQ HG+ +K+ L S + + +A++T+YAK G+++ +  VF    EKD +SWN++IS
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            YAQHG+  +A+  FK M+   ++K D  TF  V +AC+HAGLV++G + FD MV D   
Sbjct: 570 GYAQHGQAMKALDVFKEMKK-RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P ++H SCM+DL  RAG L++A +VI +    A S  W  + +AC  H    LGR+ A 
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            ++  + +  + YVLLSN+YA +G W+E A +R+L+    V K+PG SWI
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 171/595 (28%), Positives = 291/595 (48%), Gaps = 33/595 (5%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV--- 198
           A  +FDK P RD   Y +++ G + +G       LF  +H+L +  D   F+SVL V   
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            CD     FGRQLH    K GF   VSV  +L+  Y    N  D  KVF+E K    + +
Sbjct: 106 LCDE---LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER--NVV 160

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           ++  ++ G A     +E L  F  M     +P+  TF + +       V   G QVH   
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K+G +    VSN+ I +Y  CG + +A ++F + + K +V+WN+MIS YA   L   A+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280

Query: 375 LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             +  M+   +R  E +F S++   A+   +   E +H  V   G + +  +  AL+ AY
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           +K   +  A ++F  +    N+++W  +I+GFL N    + +  FSE+    +RP+E+T 
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           SV L++   IS      ++H  V+K N     ++G A++  Y K G ++ + +VF+ + +
Sbjct: 401 SVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           KD ++W+A+++ YAQ GE + A+  F  +   G IKP++ TF+++L+ C+         +
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGK 515

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            F           +    S +L +  + G ++ AE V   Q  +    +W ++ S  A H
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574

Query: 671 GNLRLGRIIAGLLLEREQDKPSVY---VLLSNIYAA---AGLWEEAANIRELLKR 719
                G+ +  L + +E  K  V    V    ++AA   AGL EE     +++ R
Sbjct: 575 -----GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 196/365 (53%), Gaps = 10/365 (2%)

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-- 298
           +A  +F+++ G   D  SY  ++ G +  GR +EA   F ++    +      F SV+  
Sbjct: 45  NAHNLFDKSPGR--DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 299 SACLCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           SA LC  + G Q+H Q +K GF    SV  + +  Y       +   +F  ++E+++V+W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFI 414
            T+IS YA+ ++    +  ++ MQ+ G +P+ FTF +   +LA  G       +H  V  
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           NG+   I VSN+LI+ Y K   +++A  +F     ++++TWN++I+G+  NG  ++ L  
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  + ++ +R  E + +  +  CA +  LR  +Q+H  V+K   +   ++  A++  Y+K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342

Query: 535 CGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           C  +  +LR+F  +    + +SW A+IS + Q+   +EAV  F  M+  G ++P++ T++
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYS 401

Query: 594 AVLSA 598
            +L+A
Sbjct: 402 VILTA 406



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 146/291 (50%), Gaps = 5/291 (1%)

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
           S  ++  A  +F +   +D  S+ +++  +++    + A   +L +  +G+  D   F S
Sbjct: 39  SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98

Query: 395 LLASSGFI--EMV-EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L  S  +  E+    +H      G + ++ V  +L+  Y K    K   ++F  M  RN
Sbjct: 99  VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           ++TW TLI+G+  N    + L  F  +     +P+ +T + AL   A       G Q+H 
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            V+KN L   + + N++I LY KCG++  +  +F+    K  ++WN++IS YA +G   E
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           A+  F +M+ +  ++  +++F +V+  C++   +    ++  S+V  YGF+
Sbjct: 279 ALGMFYSMR-LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFL 327


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 221/711 (31%), Positives = 369/711 (51%), Gaps = 42/711 (5%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++    +A+ LF  ++    + P  Y+ S+ L+AC  + +   G QLH   L+ G
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +  +V N ++SLY +   L+S + +FS                               
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFS------------------------------- 330

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  RD   YN +I G ++ GY +  + LF+ M    +  D+ + AS++  C + G L  
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH+  TK GF+    +  AL+ +Y  C ++  A   F E +  V + + +NVM+   
Sbjct: 391 GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETE--VENVVLWNVMLVAY 448

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
             +  +  +   FR M +  + P++ T+ S++  C+      +G Q+H+Q +K+ F+   
Sbjct: 449 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA 508

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +  I MY+  GK+D A  I  R   KD+VSW TMI+ Y Q N    A+  + +M   
Sbjct: 509 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 568

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GIR DE    + +++   ++ +   + IHA   ++G  +++   NAL++ Y+K   I++A
Sbjct: 569 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEA 628

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           Y  F      + I WN L++GF  +G   + L+ F+ +    +  + +T   A+ + +  
Sbjct: 629 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASET 688

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++++ GKQ+H  + K    S+  + NA+I++YAKCG +  + + F  +  K+ +SWNA+I
Sbjct: 689 ANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMI 748

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           +AY++HG G EA+  F  M     ++P+  T   VLSACSH GLVD G   F+SM  +YG
Sbjct: 749 NAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYG 807

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H  C++D+L RAG L  A+  I    I+  +  W  L SAC  H N+ +G   A
Sbjct: 808 LAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAA 867

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E +  + YVLLSN+YA    W+     R+ +K  GV K+PG SWI
Sbjct: 868 HHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 180/634 (28%), Positives = 311/634 (49%), Gaps = 52/634 (8%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           +  + P+  + S  L AC    + AF    Q+HA  +  GL     V N ++ LY     
Sbjct: 162 NENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLY----- 215

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
                                     ++ G VD A  VFD +  +D   + AMI+G ++N
Sbjct: 216 --------------------------SRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKN 249

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVV 226
             E   I LF +M+ L +    Y+F+SVLS C     LE G QLH LV K GFS    V 
Sbjct: 250 ECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 309

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NAL+++YF+ G+++ A  +F        D ++YN +++GL+  G  E+A+  F+ M +  
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNMSQR--DAVTYNTLINGLSQCGYGEKAMELFKRMQLDG 367

Query: 287 LRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           L P   T  S++ AC        G Q+HA   K GF +   +  A + +Y+ C  I+ A 
Sbjct: 368 LEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETAL 427

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---G 400
             F   + +++V WN M+  Y   +  R++   + +MQ   I P+++T+ S+L +    G
Sbjct: 428 NYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 487

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +E+ E IH+ +       N  V + LI  YAK  ++  A+ I    + +++++W T+I 
Sbjct: 488 DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+    F  + L  F ++L   +R DE  L+ A+S+CA + +L+ G+QIH     +   S
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 607

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            +   NA++TLY+KCG+++ +   F      D I+WNAL+S + Q G  +EA+  F  M 
Sbjct: 608 DLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMN 667

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G I  +  TF + + A S    +  G ++  +++   G+    +  + ++ +  + G 
Sbjct: 668 REG-IDSNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNAIISMYAKCGS 725

Query: 641 LDEAERVINSQHIQARSDN---WWALFSACAAHG 671
           + +A++    Q ++    N   W A+ +A + HG
Sbjct: 726 ISDAKK----QFLELSMKNEVSWNAMINAYSKHG 755



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 173/602 (28%), Positives = 289/602 (48%), Gaps = 24/602 (3%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +D A +VFD+MP+R +  +N MI              LF  M   +V  +  +F+ VL
Sbjct: 117 GDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVL 176

Query: 197 SVCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
             C  G + F    Q+H+ +   G      V N LI +Y   G V  A +VF+    Y+ 
Sbjct: 177 EACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGL--YLK 234

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVH 311
           DH S+  M+ GL+      EA+  F DM V  + P+   F SV+SAC       +G Q+H
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 294

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +K GF + T V NA +++Y   G +  A  IF+ + ++D V++NT+I+  +Q   G 
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 354

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  +  MQ  G+ PD  T  SL+   +S G +   + +HA+    G  +N ++  AL+
Sbjct: 355 KAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALL 414

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK   I+ A   F      N++ WN ++  + L        + F ++ + E+ P++Y
Sbjct: 415 NLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 474

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T    L +C R+  L  G+QIH  ++K +      + + +I +YAK G LD +  +    
Sbjct: 475 TYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 534

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             KD +SW  +I+ Y Q+    +A++ F+ M D G I+ D+   T  +SAC+    + +G
Sbjct: 535 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEG 593

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSA 666
            +I        GF       + ++ L  + G ++EA   +  +  +A  DN  W AL S 
Sbjct: 594 QQIHAQACVS-GFSSDLPFQNALVTLYSKCGNIEEA--YLAFEQTEA-GDNIAWNALVSG 649

Query: 667 CAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
               GN     R+ A   + RE    + +   S + AA+    E AN+++  +   VI +
Sbjct: 650 FQQSGNNEEALRVFA--RMNREGIDSNNFTFGSAVKAAS----ETANMKQGKQVHAVITK 703

Query: 726 PG 727
            G
Sbjct: 704 TG 705



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 232/473 (49%), Gaps = 13/473 (2%)

Query: 185 VRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           +R ++ +   +L  C    G L+ GR+LHS + K GF     +   L+  Y   G++  A
Sbjct: 63  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            KVF+E         ++N M+  LAS     +    F  M+  ++ P+E TF  V+ AC 
Sbjct: 123 LKVFDEMPERTI--FTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACR 180

Query: 303 CPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              V +    Q+HA+ +  G    T V N  I +YS  G +D A  +F  L  KD  SW 
Sbjct: 181 GGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWV 240

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN 415
            MIS  ++      AI  + +M  +GI P  + F S+L++   IE +E+   +H  V   
Sbjct: 241 AMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 300

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  ++  V NAL+S Y     +  A  IF NMS R+ +T+NTLING    G+  + ++ F
Sbjct: 301 GFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 360

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + +  L PD  TL+  + +C+   +L  G+Q+H Y  K    S   +  A++ LYAKC
Sbjct: 361 KRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKC 420

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
            D++ +L  F     ++ + WN ++ AY    + + +   F+ MQ +  I P+Q T+ ++
Sbjct: 421 SDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSI 479

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           L  C   G ++ G +I   ++    F       S ++D+  + G LD A  ++
Sbjct: 480 LKTCIRLGDLELGEQIHSQIIKT-SFQLNAYVCSVLIDMYAKLGKLDTAWDIL 531



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 212/468 (45%), Gaps = 79/468 (16%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SN S+   +  N  +  LS+ G+ + A+ LF ++     L+PD  +L++ + AC++    
Sbjct: 330 SNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLD-GLEPDSNTLASLVVACSSDGTL 388

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF--SEIQN----------- 120
             G QLHAY  + G  +   +   +L+LY    D+ +    F  +E++N           
Sbjct: 389 FSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAY 448

Query: 121 ----------------------PDVYSWTTFLSACTKMGHVD------------------ 140
                                 P+ Y++ + L  C ++G ++                  
Sbjct: 449 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNA 508

Query: 141 YACEVFDKM-----------------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           Y C V   M                   +D+  +  MI G T+  ++D  +  FR+M   
Sbjct: 509 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 568

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +R D     + +S C AGL  L+ G+Q+H+    SGFS  +   NAL+T+Y  CGN+ +
Sbjct: 569 GIRSDEVGLTNAVSAC-AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEE 627

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVM 298
           A   FE+ +    D+I++N ++ G    G  EEAL  F  M    +  +  TF   V   
Sbjct: 628 AYLAFEQTEA--GDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAA 685

Query: 299 SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
           S     + G QVHA   K+G+++ T V NA I+MY+ CG I +A   F  L  K+ VSWN
Sbjct: 686 SETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWN 745

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            MI+ Y++   G  A+ ++ +M    +RP+  T   +L++   I +V+
Sbjct: 746 AMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVD 793


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/714 (31%), Positives = 384/714 (53%), Gaps = 44/714 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  L + SR    ++AL+LFV + HSS  L+PD  +LS     CA   +   G Q+H   
Sbjct: 62  NQLLFSYSRDKQTKEALNLFVSLLHSS--LQPDESTLSCVFNICAGSLDGKLGRQVHCQC 119

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ GL  +  V  +++ +Y    ++   +RVF E+   +V SWT+ L+  +  G   Y  
Sbjct: 120 VKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVW 179

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
           E+F +M                   YE              V  + Y+ ++V+ ++ + G
Sbjct: 180 ELFCQMQ------------------YE-------------GVLPNRYTVSTVIAALVNEG 208

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           ++  G Q+H++V K GF   + V N+LI++Y   G + DA  VF++ +  + D +++N M
Sbjct: 209 VVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKME--IRDWVTWNSM 266

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G    G+  E    F  M +A ++P+ +TF SV+ +C   R   +   +  +A+KSGF
Sbjct: 267 IAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGF 326

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYL 378
                V  A +   S C ++D+A  +F+ ++E K++VSW  MIS   Q      A+  + 
Sbjct: 327 TTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFS 386

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           +M+  G++P+ FT+ ++L     + + EM HA V       +  V  AL+ AY K     
Sbjct: 387 QMRREGVKPNHFTYSAILTVHYPVFVSEM-HAEVIKTNYERSSSVGTALLDAYVKLGNTI 445

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F  +  ++++ W+ ++ G+   G   +  + F +L+   ++P+E+T S  +++CA
Sbjct: 446 DAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACA 505

Query: 499 R-ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
              ++   GKQ H Y +K  L + + + +A++T+YAK G++D +  VF    E+D +SWN
Sbjct: 506 SPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWN 565

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++IS Y+QHG+ K+A+  F  MQ    +  D  TF  V++AC+HAGLV+ G + F+SM+N
Sbjct: 566 SMISGYSQHGQAKKALEVFDEMQK-RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIN 624

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           D+   P   H SCM+DL  RAG L++A  +IN       +  W  L  A   H N+ LG 
Sbjct: 625 DHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGE 684

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  L+  + +  + YVLLSN+YAAAG W+E  N+R+L+ +  V K+PG SWI
Sbjct: 685 LAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWI 738



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 4/217 (1%)

Query: 440 AYQIFHNMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           A+ +F  +   P  +   N L+  +  +    + L  F  LL S L+PDE TLS   + C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A     + G+Q+H   +K  L+  +S+G +++ +Y K  +++   RVF+ M E++ +SW 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           +L++ Y+ +G        F  MQ  G + P++ T + V++A  + G+V  G ++  +MV 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEG-VLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVV 221

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
            +GF  A    + ++ L  R G L +A  V +   I+
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR 258


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/719 (31%), Positives = 377/719 (52%), Gaps = 48/719 (6%)

Query: 22   LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
            L  N  +      G  ++A+ L   +  S K + D+ + S+ L  CA  +    G  +H+
Sbjct: 419  LDENTKICKFCEVGDLRNAVEL---LRMSQKSELDLNAYSSILQLCAEHKCLQEGKMVHS 475

Query: 82   YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI-QNPDVYSWTTFLSACTKMGHVD 140
                 G+     +   ++ +Y +   L   +R+F  I  +  V+ W   +S   K+G  D
Sbjct: 476  VISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIG--D 533

Query: 141  YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            Y   ++                             LF++M KL +  ++Y+F+ +L  C 
Sbjct: 534  YRESIY-----------------------------LFKKMQKLGITGNSYTFSCILK-CF 563

Query: 201  AGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            A L   G  +++H  V K GF    +VVN+LI  YF  G V  A K+F+E      D +S
Sbjct: 564  ATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDR--DVVS 621

Query: 259  YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
            +N M+ G    G    AL  F  ML+  +     T V+ ++AC       +G  +H Q +
Sbjct: 622  WNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGV 681

Query: 316  KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
            K+ F      +N  + MYS CG +++A   F ++ +K +VSW ++I+ Y +  L   AI 
Sbjct: 682  KACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIR 741

Query: 376  AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
             + EM+S G+ PD ++  S+L   A    ++    +H ++  N +   + VSNAL+  YA
Sbjct: 742  LFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYA 801

Query: 433  KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
            K   +++AY +F  +  ++I++WNT+I G+  N  P + L+ F+E+   E RPD  T++ 
Sbjct: 802  KCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKESRPDGITMAC 860

Query: 493  ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
             L +C  +++L  G+ IHG +L+N   S++ + NA+I +Y KCG L  +  +F+M+ EKD
Sbjct: 861  LLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKD 920

Query: 553  TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
             I+W  +IS    HG G EA++ F+ M+  G IKPD+ TFT++L ACSH+GL+++G   F
Sbjct: 921  LITWTVMISGCGMHGLGNEAIATFQKMRIAG-IKPDEITFTSILYACSHSGLLNEGWGFF 979

Query: 613  DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            +SM+++    P  +H +CM+DLL R G L +A  +I +  I+  +  W AL   C  H +
Sbjct: 980  NSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHD 1039

Query: 673  LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + L   +A  + E E D    YVLL+NIYA A  WEE   +RE + + G+ K PGCSWI
Sbjct: 1040 VELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWI 1098



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   S++    +AL LF ++    +  PD  +++  L AC +L     G  +H
Sbjct: 821 IVSWNTMIGGYSKNSLPNEALKLFAEMQKESR--PDGITMACLLPACGSLAALEIGRGIH 878

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              LR G  +  HVAN ++ +Y     LV  + +F  I   D+ +WT  +S C   G  +
Sbjct: 879 GCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGN 938

Query: 141 YACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            A   F KM      PD     + +++  C+ +G  + G G F  M
Sbjct: 939 EAIATFQKMRIAGIKPDE--ITFTSILYACSHSGLLNEGWGFFNSM 982


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 222/709 (31%), Positives = 371/709 (52%), Gaps = 42/709 (5%)

Query: 30  NLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           ++   G+ ++AL +FV +       P+ + L++ + AC  L     G QLH + +R+G  
Sbjct: 10  DMEDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF- 68

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
                                         + DVY  T+ +   +K G ++ A  VFD++
Sbjct: 69  ------------------------------DQDVYVGTSLIDFYSKNGBIEVARLVFDQL 98

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGR 208
            ++    +  +I G T+ G   + + LF +M + +V  D Y  +SVLS C     LE G+
Sbjct: 99  LEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGK 158

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H+ V + G    VSVVN LI  Y  C  V    K+F++    V + IS+  M+ G   
Sbjct: 159 QIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM--VVKNIISWTTMISGYMQ 216

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
                EA+  F +M     +P      SV+++C        G QVHA  +K+  E+   V
Sbjct: 217 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFV 276

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            N  I MY+    + +A  +F  + E++++S+N MI  Y+ +     A+  + EM+    
Sbjct: 277 KNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 336

Query: 386 RPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P   TF SLL  S     +E+ + IH  +   G+  ++   +ALI  Y+K   +K A  
Sbjct: 337 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARH 396

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M+ ++I+ WN +  G+  +    + L+ +S L  S  +P+E+T +  +++ + ++S
Sbjct: 397 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 456

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           LRHG+Q H  ++K  L     + NA++ +YAKCG ++ + ++FN  I +D + WN++IS 
Sbjct: 457 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 516

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +AQHGE +EA+  F+ M   G I+P+  TF AVLSACSHAG V+DG   F+SM   +G  
Sbjct: 517 HAQHGEAEEALGMFREMMKEG-IQPNYVTFVAVLSACSHAGXVEDGLNHFNSMPG-FGIK 574

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H +C++ LLGR+G L EA+  I    I+  +  W +L SAC   GN+ LG+  A +
Sbjct: 575 PGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEM 634

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +  +      Y+LLSNI+A+ G+W +   +R+ +  + V+K+PG SWI
Sbjct: 635 AISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 683


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/715 (31%), Positives = 372/715 (52%), Gaps = 44/715 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   + G ++D++ L V++ +   + PD  +L+  L AC  L + A G Q+HA A+
Sbjct: 105 NALLSGYCQRGMFRDSVGLSVEM-ARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAV 163

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+      + ++ +Y   R L    R F  +   +  SW                  
Sbjct: 164 KTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSW------------------ 205

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                         A I GC +N     G+ LF +M +L +     ++ASV   C A   
Sbjct: 206 -------------GAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITC 252

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   RQLH+   K+ FS    V  A++ +Y    ++VDA + F     +     + N MM
Sbjct: 253 LSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQ--ACNAMM 310

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            GL   G   EAL  F+ M  + +    ++   V SAC   +    G QVH  A+KSGF+
Sbjct: 311 VGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFD 370

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL-E 379
               V NA + +Y  C  + EA ++F  ++++D VSWN +I+   Q       I AYL E
Sbjct: 371 VDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTI-AYLNE 429

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNER 436
           M   G+ PD+FT+GS+L +   ++ +E   ++H     +G+  +  VS+ ++  Y K   
Sbjct: 430 MLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGM 489

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I +A ++   +  + +++WN++I+GF LN    +  + FSE+L   ++PD +T +  L +
Sbjct: 490 ITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDT 549

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA ++++  GKQIHG ++K  ++    + + ++ +YAKCG++  SL +F    + D +SW
Sbjct: 550 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSW 609

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA+I  YA HG+G EA+  F+ MQ    + P+ ATF AVL ACSH GL+DDG R F  M 
Sbjct: 610 NAMICGYALHGQGFEALEMFERMQQ-ANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMT 668

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
           + Y   P  +H +CM+D+LGR+    EA + I S  ++A +  W  L S C    ++ + 
Sbjct: 669 SRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVA 728

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              A  +L  + D  SVY+LLSN+YA +G W + +  R L+++  + K+PGCSWI
Sbjct: 729 ETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 783



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 287/619 (46%), Gaps = 18/619 (2%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L A A     A G   HA  L +G      V+N +L +Y         + VF  + + D 
Sbjct: 11  LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW T L+A    G    A  +F  MPD D+  +NA+++G  + G     +GL  EM + 
Sbjct: 71  VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            V  D  + A +L  C  GL  L  G Q+H++  K+G    V   +AL+ MY  C ++ D
Sbjct: 131 GVAPDRTTLAVLLKAC-GGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLED 189

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A + F        + +S+   + G     +    L  F  M    L  S+  + SV  +C
Sbjct: 190 ALRFFHGMGER--NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSC 247

Query: 302 ---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
               C     Q+HA A+K+ F A   V  A + +Y+    + +A   F  L    + + N
Sbjct: 248 AAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACN 307

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHAFVFI 414
            M+    +  LG  A+  +  M   GI  D  +   + ++     G+++ ++ +H     
Sbjct: 308 AMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ-VHCLAIK 366

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           +G   ++ V NA++  Y K + + +AY +F  M  R+ ++WN +I     N      + +
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAY 426

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
            +E+L   + PD++T    L +CA + SL +G  +HG  +K+ L     + + ++ +Y K
Sbjct: 427 LNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCK 486

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG +  + ++ + +  ++ +SWN++IS ++ + + +EA   F  M D+G +KPD  T+  
Sbjct: 487 CGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIG-VKPDHFTYAT 545

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI-NSQHI 653
           VL  C++   ++ G +I   ++     +  E   S ++D+  + G + ++  +   +Q +
Sbjct: 546 VLDTCANLATIELGKQIHGQIIKQE-MLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKL 604

Query: 654 QARSDNWWALFSACAAHGN 672
              S  W A+    A HG 
Sbjct: 605 DFVS--WNAMICGYALHGQ 621


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/710 (31%), Positives = 378/710 (53%), Gaps = 47/710 (6%)

Query: 34  SGHYQDALH--LFVQIHSSHKL--KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SG+ Q+ L     +  H  H L  K + ++ S+ L AC+ +++   G Q+H   + +G +
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VANT++ +Y    + +  KR+F EI   +V SW    S   +   +D+  E     
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ---IDFCGE----- 241

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--G 207
                                   +GLF EM    ++ + +S +S+++ C  GL +   G
Sbjct: 242 -----------------------AVGLFYEMVLSGIKPNEFSLSSMVNAC-TGLRDSSRG 277

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H  + K G+       NAL+ MY   G++ DA  VFE+ K    D +S+N ++ G  
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ--PDIVSWNAVIAGCV 335

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS 324
                E+AL     M  + + P+  T  S + AC       +G Q+H+  MK   E+   
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           VS   + MYS C  +++A M F  L EKD+++WN +IS Y+Q      A+  ++EM   G
Sbjct: 396 VSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEG 455

Query: 385 IRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I  ++ T  ++L S+  +++V +   +H     +G  ++I V N+LI +Y K   ++ A 
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           +IF   +  +++++ ++I  +   G   + L+ F E+   EL+PD +  S  L++CA +S
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +   GKQ+H ++LK   +  +  GN+++ +YAKCG +D + R F+ + E+  +SW+A+I 
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
             AQHG G++A+  F  M   G + P+  T  +VL AC+HAGLV +    F+SM   +GF
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEG-VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGF 694

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P ++H +CM+DLLGRAG ++EA  ++N    +A +  W AL  A   H ++ LGR  A 
Sbjct: 695 KPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAE 754

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +L   E +K   +VLL+NIYA+AG WE  A +R L++ + V K+PG SWI
Sbjct: 755 MLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWI 804



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/665 (26%), Positives = 334/665 (50%), Gaps = 46/665 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P   S S  L+ C   ++   G Q+HA+  ++GL   P + N +++LY   R+    +++
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
             E   PD+ S                               ++A+I+G  +NG     +
Sbjct: 114 VDESSEPDLVS-------------------------------WSALISGYAQNGLGGGAL 142

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
             F EMH L V+ + ++F+SVL  C     L  G+Q+H +V  SGF   V V N L+ MY
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C   +D+ ++F+E      + +S+N +      +    EA+  F +M+++ ++P+E +
Sbjct: 203 AKCDEFLDSKRLFDEIPER--NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFS 260

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S+++AC   R    G  +H   +K G++     +NA + MY+  G + +A  +F +++
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK 320

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           + DIVSWN +I+          A+    +M+  GI P+ FT  S L   A  G  E+   
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQ 380

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+ +    + +++ VS  L+  Y+K + ++ A   F+ +  +++I WN +I+G+     
Sbjct: 381 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 440

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
            ++ L  F E+    +  ++ TLS  L S A +  +   +Q+HG  +K+   S + + N+
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 500

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I  Y KC  ++ + R+F      D +S+ ++I+AYAQ+G+G+EA+  F  MQD+  +KP
Sbjct: 501 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM-ELKP 559

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+   +++L+AC++    + G ++   ++  YGF+      + ++++  + G +D+A R 
Sbjct: 560 DRFVCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRA 618

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AG 705
             S+  +    +W A+    A HG+ R    +   +L +E   P+   L+S + A   AG
Sbjct: 619 F-SELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML-KEGVSPNHITLVSVLGACNHAG 676

Query: 706 LWEEA 710
           L  EA
Sbjct: 677 LVTEA 681


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/709 (31%), Positives = 379/709 (53%), Gaps = 44/709 (6%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+  Y DA+ +FV++ +  +   D ++    + AC    +   G  +H   ++ GL    
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y                                K G VD A +VF  MP R
Sbjct: 67  FVGNALIAMY-------------------------------GKFGFVDAAVKVFHYMPVR 95

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFASVLSVCDAGL-LEFGRQ 209
           +L  +N++I+G +ENG+      +  EM   +  +  D  +  +VL VC   + ++ G +
Sbjct: 96  NLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR 155

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H L  K G S  V V N+L+ MY  CG + +A  +F+  K    + +S+N M+ GL + 
Sbjct: 156 IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD--KNNRKNAVSWNTMIGGLCTK 213

Query: 270 GRVEEALIRFRDM-LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
           G + EA   FR+M +   +  +E+T ++++ ACL     R   ++H  +++ GF+    V
Sbjct: 214 GYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELV 273

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +N  +  Y+ CG +  A  +F  ++ K + SWN +I   AQ    R A+  Y++M   G+
Sbjct: 274 ANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGL 333

Query: 386 RPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD FT GSLL +S  ++ +   + +H FV  +G+  +  +  +L+S Y        A  
Sbjct: 334 VPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARL 393

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  ++ ++WN +I+G+  NG P   L  F +L+    +P +  +   L +C++ S+
Sbjct: 394 LFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSA 453

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           LR GK+ H Y LK  L+  + +  + I +YAK G +  S  VF+ +  KD  SWNA+I+A
Sbjct: 454 LRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAA 513

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y  HG+G+E++  F+ M+ VG++ PD  TF  +L+ CSHAGLV++G + F+ M N +G  
Sbjct: 514 YGVHGDGEESIELFERMRKVGQM-PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIE 572

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H +C++D+LGRAG LD+A R+++    Q  S  W +L S C   G L +G+I+A  
Sbjct: 573 PKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEK 632

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E      YV LSN+YA +G W++   +R+++K  G+ K  GCSWI
Sbjct: 633 LLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWI 681



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 132/565 (23%), Positives = 250/565 (44%), Gaps = 56/565 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  ++  S +G  +D   + V++ +  + L PDI +L T L  CA   +   G ++
Sbjct: 97  LVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRI 156

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H  A++ GL     V N+++ +Y     L   + +F +    +  SW             
Sbjct: 157 HGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSW------------- 203

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSV 198
                             N MI G    GY      LFREM  + D+  +  +  ++L  
Sbjct: 204 ------------------NTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPA 245

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C +   L   ++LH    + GF     V N  +  Y  CG ++ A +VF   +    +  
Sbjct: 246 CLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN-- 303

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           S+N ++ G A  G   +AL  +  M  + L P   T  S++ A       R G +VH   
Sbjct: 304 SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           ++ G E  + +  + +++Y  CG+   A ++F  ++EK  VSWN MIS Y+Q  L   A+
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           + + ++ S G +P +    S+L +      + + +  H +     ++ ++ V+ + I  Y
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK+  IK++  +F  +  +++ +WN +I  + ++G   + ++ F  +      PD +T  
Sbjct: 484 AKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFI 543

Query: 492 VALSSCARISSLRHG-------KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
             L+ C+    +  G       +  HG      +  K+     ++ +  + G LD +LR+
Sbjct: 544 GILTVCSHAGLVEEGLKYFNEMQNFHG------IEPKLEHYACVMDMLGRAGRLDDALRL 597

Query: 545 FNMMIEK-DTISWNALISAYAQHGE 568
            + M E+ D+  W++L+S     GE
Sbjct: 598 VHEMPEQPDSRVWSSLLSFCRNFGE 622



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 223/484 (46%), Gaps = 50/484 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L   G+  +A +LF ++     ++ +  ++   L AC  +       +LH Y++
Sbjct: 204 NTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSI 263

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G +    VAN  ++ Y     L+  +RVF  ++   V SW                  
Sbjct: 264 RHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSW------------------ 305

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
                        NA+I GC +NG     + L+ +M    +  D ++  S+L +  A L 
Sbjct: 306 -------------NALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLL-LASAHLK 351

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYN 260
            L +G+++H  V + G      +  +L+++Y +CG    A  +F+  E K  V    S+N
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSV----SWN 407

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            M+ G +  G  E+ALI FR ++    +PS++  VSV+ AC      R+G + H  A+K+
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
                  V+ + I MY+  G I E+  +F  L+ KD+ SWN +I+ Y     G  +I  +
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELF 527

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
             M+ VG  PD FTF  +L   + +G +E  ++  +     +GI   ++    ++    +
Sbjct: 528 ERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGR 587

Query: 434 NERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
             R+  A ++ H M  + +   W++L++ F  N   ++  Q  +E L+ EL P      V
Sbjct: 588 AGRLDDALRLVHEMPEQPDSRVWSSLLS-FCRNFGELEIGQIVAEKLL-ELEPKNVENYV 645

Query: 493 ALSS 496
           +LS+
Sbjct: 646 SLSN 649


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/714 (31%), Positives = 370/714 (51%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +  G +  AL  + ++     L PD Y+    + AC  L + A G  +H    
Sbjct: 116 NWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    V ++++  Y                               ++ G +  A  
Sbjct: 175 FMGFELDVFVGSSLIKFY-------------------------------SENGCIHDARY 203

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD+MP +D  ++N M+ G  +NG  D   G+F EM + +   ++ +FA VLSVC + ++
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FG QLH LV  SG      V N L+ MY  CG++ DA ++F+       D +++N M+
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK--TDLVTWNGMI 321

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVS---VMSACLCPRVGYQVHAQAMKSGFE 320
            G    G ++EA   F +M+ A ++P  +TF S   ++S     R G ++H   +++G  
Sbjct: 322 SGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVS 381

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + +A I +Y  C  ++ A  IF +    DIV    MIS Y    +  +A+  +  +
Sbjct: 382 LDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 441

Query: 381 QSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               +R +  T  S+L A +G   + + + +H  +  NG   +  V +A++  YAK  R+
Sbjct: 442 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRL 501

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A+Q F  +S ++ + WN++I     NG P + +  F ++ M+  + D  ++S ALS+C
Sbjct: 502 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +L +GK+IH ++++    S +   +A+I +Y+KCG+LD + RVF+ M EK+ +SWN
Sbjct: 562 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWN 621

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+AY  HG  K++++ F  M   G I+PD  TF A++SAC HAG VD+G   F  M  
Sbjct: 622 SIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTE 680

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           + G +   +H +CM+DL GRAG L+EA  +INS      +  W  L  AC  HGN+ L  
Sbjct: 681 ELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAE 740

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L + +      YVLLSN++A AG WE    IR L+K  GV K PGCSWI
Sbjct: 741 VASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWI 794



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 180/636 (28%), Positives = 304/636 (47%), Gaps = 48/636 (7%)

Query: 47  IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNAR 106
           IH+   L P + S+   L  C +    + G Q HA  L  G+     +   +L +Y    
Sbjct: 39  IHNDDSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCG 95

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
             +  K +F +++      W   +   T MG  D+A   + KM                 
Sbjct: 96  AFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM----------------- 138

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVS 224
                +G G            D Y+F  V+  C  GL  +  GR +H  +   GF   V 
Sbjct: 139 -----LGCGTL---------PDKYTFPYVIKAC-GGLNSVALGRVVHDKIQFMGFELDVF 183

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V ++LI  Y   G + DA  +F+       D + +NVM++G    G  + A   F +M  
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241

Query: 285 ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
               P+ +TF  V+S C   +    G Q+H   + SG E  + V+N  + MY+ CG + +
Sbjct: 242 TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFD 301

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLAS 398
           A  +F  + + D+V+WN MIS Y Q      A   + EM S  ++PD  TF S   LL+ 
Sbjct: 302 ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSE 361

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
              +   + IH ++  NG+  ++ + +ALI  Y K   ++ A +IF   +P +I+    +
Sbjct: 362 GATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAM 421

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+G++LNG     L+ F  LL   +R +  TL+  L +CA +++L  GK++HG++LKN  
Sbjct: 422 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 481

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                +G+A++ +YAKCG LD + + F  + +KD + WN++I++ +Q+G+ +EA+  F+ 
Sbjct: 482 GGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ 541

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M   G  K D  + +A LSAC++   +  G  I   M+    F       S ++D+  + 
Sbjct: 542 MGMAG-TKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKC 599

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           G LD A RV ++   +    +W ++ +A   HG L+
Sbjct: 600 GNLDLACRVFDTME-EKNEVSWNSIIAAYGNHGRLK 634



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 222/460 (48%), Gaps = 47/460 (10%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  L+  N  ++   ++G   +A  LF ++ S+ ++KPD  + S+ L   +       G 
Sbjct: 311 KTDLVTWNGMISGYVQNGFMDEASCLFHEMISA-RMKPDSITFSSFLPLLSEGATLRQGK 369

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H Y +R G+     + + ++ +Y   RD                              
Sbjct: 370 EIHCYIIRNGVSLDVFLKSALIDIYFKCRD------------------------------ 399

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            V+ A ++FD+    D+ V  AMI+G   NG  +  + +FR + +  +R ++ + ASVL 
Sbjct: 400 -VEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLP 458

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C AGL  L  G++LH  + K+G      V +A++ MY  CG +  A + F        D
Sbjct: 459 AC-AGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK--D 515

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRVGY--QVHA 312
            + +N M+   +  G+ EEA+  FR M +A  +   ++  + +SAC   P + Y  ++HA
Sbjct: 516 AVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHA 575

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             M+  F +     +A I MYS CG +D AC +F  ++EK+ VSWN++I+ Y      + 
Sbjct: 576 FMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKD 635

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFIN---GIITNIQVSNALI 428
           ++  +  M   GI+PD  TF +++++ G    V E IH F  +    GI+  ++    ++
Sbjct: 636 SLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMV 695

Query: 429 SAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
             + +  R+ +A+ + ++M  SP +   W TL+    L+G
Sbjct: 696 DLFGRAGRLNEAFGMINSMPFSP-DAGVWGTLLGACRLHG 734


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/704 (30%), Positives = 371/704 (52%), Gaps = 42/704 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G+   A++LF ++     ++ + ++ +T L AC+   +  FG Q+HA A++ G  +   V
Sbjct: 208 GYGSGAVNLFCEMRR-EGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFV 266

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + ++ LY    ++V  +RVF  +   +  SW   L+   +MG  +              
Sbjct: 267 GSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKV------------ 314

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                              + LF  M   ++    ++ ++VL  C ++G L  G+ +HSL
Sbjct: 315 -------------------LNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSL 355

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             + G      +   L+ MY  CG   DA KVF   +    D +S++ ++  L   G+  
Sbjct: 356 AIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDP--DVVSWSAIITCLDQKGQSR 413

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           EA   F+ M  + + P++ T  S++SA         G  +HA   K GFE   +V NA +
Sbjct: 414 EAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALV 473

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           TMY   G + + C +F     +D++SWN ++S +       + +  + +M + G  P+ +
Sbjct: 474 TMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMY 533

Query: 391 TFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           TF S+L S   +  V++   +HA +  N +  N  V  AL+  YAKN  ++ A  IF+ +
Sbjct: 534 TFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL 593

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             R++  W  ++ G+  +G   + ++ F ++    ++P+E+TL+ +LS C+RI++L  G+
Sbjct: 594 IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGR 653

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+H   +K      M + +A++ +YAKCG ++ +  VF+ ++ +DT+SWN +I  Y+QHG
Sbjct: 654 QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHG 713

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
           +G +A+  F+AM D G + PD+ TF  VLSACSH GL+++G + F+S+   YG  P  +H
Sbjct: 714 QGGKALKAFEAMLDEGTV-PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 772

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
            +CM+D+LGRAG   E E  I    + +    W  +  AC  HGN+  G   A  L E E
Sbjct: 773 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 832

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +  S Y+LLSN++AA G+W++  N+R L+   GV K+PGCSW+
Sbjct: 833 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 876



 Score =  297 bits (761), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/563 (31%), Positives = 304/563 (53%), Gaps = 20/563 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           NPD + W + ++   K G  +YAC+VF ++P+RD+  + A+ITG    GY    + LF E
Sbjct: 160 NPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCE 219

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  V  + +++A+ L  C   L LEFG+Q+H+   K G    + V +AL+ +Y  CG 
Sbjct: 220 MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGE 279

Query: 239 VVDACKVFEEAKGYVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           +V A +VF      +C    + +S+N +++G A +G  E+ L  F  M  + +  S+ T 
Sbjct: 280 MVLAERVF------LCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTL 333

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+  C      R G  VH+ A++ G E    +S   + MYS CG   +A  +F R+++
Sbjct: 334 STVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIED 393

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMI 408
            D+VSW+ +I+   Q+   R A   +  M+  G+ P++FT  SL++++   G +   E I
Sbjct: 394 PDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESI 453

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA V   G   +  V NAL++ Y K   ++   ++F   + R++I+WN L++GF  N   
Sbjct: 454 HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETC 513

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
             GL+ F+++L     P+ YT    L SC+ +S +  GKQ+H  ++KN+L     +G A+
Sbjct: 514 DTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTAL 573

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +YAK   L+ +  +FN +I++D  +W  +++ YAQ G+G++AV CF  MQ  G +KP+
Sbjct: 574 VDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREG-VKPN 632

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           + T  + LS CS    +D G R   SM    G        S ++D+  + G +++AE V 
Sbjct: 633 EFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 691

Query: 649 NSQHIQARSDNWWALFSACAAHG 671
           +   +   + +W  +    + HG
Sbjct: 692 DGL-VSRDTVSWNTIICGYSQHG 713



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 261/559 (46%), Gaps = 43/559 (7%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+  +  N  L   ++ G  +  L+LF ++  S ++    ++LST L  CAN  N   G 
Sbjct: 292 KQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGS-EINFSKFTLSTVLKGCANSGNLRAGQ 350

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H+ A+R G +    ++  ++ +Y          +VF  I++PDV SW+  ++   + G
Sbjct: 351 IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKG 410

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
               A EV                               F+ M    V  + ++ AS++S
Sbjct: 411 QSREAAEV-------------------------------FKRMRHSGVIPNQFTLASLVS 439

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
              D G L +G  +H+ V K GF    +V NAL+TMY   G+V D C+VFE       D 
Sbjct: 440 AATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR--DL 497

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQ 313
           IS+N ++ G       +  L  F  ML     P+  TF+S++ +C       +G QVHAQ
Sbjct: 498 ISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQ 557

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K+  +    V  A + MY+    +++A  IF RL ++D+ +W  +++ YAQ   G  A
Sbjct: 558 IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKA 617

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           +  +++MQ  G++P+EFT  S L+    I  ++    +H+     G   ++ V++AL+  
Sbjct: 618 VKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDM 677

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   ++ A  +F  +  R+ ++WNT+I G+  +G   + L+ F  +L     PDE T 
Sbjct: 678 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTF 737

Query: 491 SVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMM 548
              LS+C+ +  +  GK+    + K   +   +     M+ +  + G   +    +  M 
Sbjct: 738 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 797

Query: 549 IEKDTISWNALISAYAQHG 567
           +  + + W  ++ A   HG
Sbjct: 798 LTSNVLIWETVLGACKMHG 816



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 200/403 (49%), Gaps = 7/403 (1%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G  +H Q +KSG    + + N+ + +Y+ CG  + AC +F  + E+D+VSW  +I+ +  
Sbjct: 147 GKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVA 206

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQV 423
              G  A+  + EM+  G+  +EFT+ + L +      +E  + +HA     G  +++ V
Sbjct: 207 EGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFV 266

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            +AL+  YAK   +  A ++F  M  +N ++WN L+NGF   G   + L  F  +  SE+
Sbjct: 267 GSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEI 326

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
              ++TLS  L  CA   +LR G+ +H   ++        +   ++ +Y+KCG    +L+
Sbjct: 327 NFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALK 386

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  + + D +SW+A+I+   Q G+ +EA   FK M+  G I P+Q T  +++SA +  G
Sbjct: 387 VFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI-PNQFTLASLVSAATDLG 445

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
            +  G  I  + V  YGF       + ++ +  + G + +  RV  +        +W AL
Sbjct: 446 DLYYGESI-HACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEAT-TNRDLISWNAL 503

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            S    +     G  I   +L  E   P++Y  +S + + + L
Sbjct: 504 LSGFHDNETCDTGLRIFNQMLA-EGFNPNMYTFISILRSCSSL 545



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 135/252 (53%), Gaps = 2/252 (0%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           AS G +   + IH  V  +GI  +  + N+L++ YAK      A ++F  +  R++++W 
Sbjct: 139 ASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWT 198

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            LI GF+  G+    +  F E+    +  +E+T + AL +C+    L  GKQ+H   +K 
Sbjct: 199 ALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKV 258

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
              S + +G+A++ LYAKCG++  + RVF  M +++ +SWNAL++ +AQ G+ ++ ++ F
Sbjct: 259 GDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLF 318

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M     I   + T + VL  C+++G +  G +I  S+    G    E    C++D+  
Sbjct: 319 CRMTG-SEINFSKFTLSTVLKGCANSGNLRAG-QIVHSLAIRIGCELDEFISCCLVDMYS 376

Query: 637 RAGYLDEAERVI 648
           + G   +A +V 
Sbjct: 377 KCGLAGDALKVF 388



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 37/255 (14%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +CA    L  GK IHG V+K+ +     L N+++ +YAKCG  + + +VF  + E+D 
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS------------- 600
           +SW ALI+ +   G G  AV+ F  M+  G ++ ++ T+   L ACS             
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREG-VEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 601 HAGLVDDGTRIF--DSMVNDYG----FIPAEDHLSCMLD--------LLGRAGYLDEAER 646
            A  V D + +F   ++V+ Y      + AE    CM          LL     + +AE+
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313

Query: 647 VIN------SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER--EQDKPSVYVLLS 698
           V+N         I         +   CA  GNLR G+I+  L +    E D+  +   L 
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDE-FISCCLV 372

Query: 699 NIYAAAGLWEEAANI 713
           ++Y+  GL  +A  +
Sbjct: 373 DMYSKCGLAGDALKV 387


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/717 (31%), Positives = 365/717 (50%), Gaps = 42/717 (5%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           L  N  +   S  G +  AL  F ++  S+ + PD Y+    + AC  L N      +H 
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSN-VAPDKYTFPYVIKACGGLNNVPLCKMVHE 201

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A   G      + ++++ LY                               T  G++  
Sbjct: 202 LARSMGFHMDLFIGSSLIKLY-------------------------------TDNGYIHD 230

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A  +FD++P RD  ++N M+ G  +NG  +  +G F+EM    V+ ++ SF  +LSVC  
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCAT 290

Query: 202 -GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            G++  G QLH LV +SGF    +V N +ITMY  CGN+ DA K+F+       D +++N
Sbjct: 291 RGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQ--TDTVTWN 348

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS 317
            ++ G    G  +EA+  F+ M+ + ++   +TF S + + L     +   +VH+  ++ 
Sbjct: 349 GLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRH 408

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G      + +A + +Y   G ++ AC  F +    D+     MIS Y    L   A+  +
Sbjct: 409 GVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLF 468

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             +   G+ P+  T  S+L   A+   +++ + +H  +   G+    QV +++   YAK+
Sbjct: 469 RWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKS 528

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            R+  AYQ F  M  ++ + WN +I  F  NG P   +  F ++  S  + D  +LS  L
Sbjct: 529 GRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATL 588

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S+CA   +L +GK++H +V++N+ IS   + + +I +Y+KCG L  +  VF+MM  K+ +
Sbjct: 589 SACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEV 648

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I+AY  HG  +E +  F  M + G I+PD  TF  ++SAC HAGLVD+G   F  
Sbjct: 649 SWNSIIAAYGNHGRPRECLDLFHEMVEAG-IQPDHVTFLVIMSACGHAGLVDEGIYYFRC 707

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  +YG     +H +CM+DL GRAG L EA   I S      +  W +L  AC  HGN+ 
Sbjct: 708 MTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVE 767

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L ++ +  L+E + +    YVLLSN++A AG WE    +R L+K  GV K PG SWI
Sbjct: 768 LAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWI 824



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 207/403 (51%), Gaps = 17/403 (4%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           RQ+H+ V   G +  +++ + ++ MY  C +  D   +F   +  +C  + +N ++ G +
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQ--LCYSLPWNWLIRGFS 153

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQVHAQAMKSGFE 320
            +G  + AL+ F  ML +++ P + TF  V+ AC       LC      VH  A   GF 
Sbjct: 154 MLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCK----MVHELARSMGFH 209

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + ++ I +Y+  G I +A  +F  L  +D + WN M++ Y +     SA+  + EM
Sbjct: 210 MDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEM 269

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           ++  ++P+  +F  LL   A+ G +     +H  V  +G  ++  V+N +I+ Y+K   +
Sbjct: 270 RNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNL 329

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A +IF  M   + +TWN LI G++ NGF  + +  F  ++ S ++ D  T +  L S 
Sbjct: 330 FDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSV 389

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            +  SL++ K++H Y++++ +   + L +A++ +Y K GD++ + + F      D     
Sbjct: 390 LKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCT 449

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           A+IS Y  +G   EA++ F+ +   G + P+  T  +VL AC+
Sbjct: 450 AMISGYVLNGLNVEALNLFRWLIQEGMV-PNCLTMASVLPACA 491



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 200/407 (49%), Gaps = 41/407 (10%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA+ +  G     ++ +  + MY  C    +   +F RLQ    + WN +I  ++   
Sbjct: 97  QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSN 425
               A++ +  M    + PD++TF  ++ + G    + + +M+H      G   ++ + +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LI  Y  N  I  A  +F  +  R+ I WN ++NG++ NG     L  F E+  S ++P
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  +    LS CA    +R G Q+HG V+++   S  ++ N +IT+Y+KCG+L  + ++F
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           ++M + DT++WN LI+ Y Q+G   EAV+ FKAM   G +K D  TF + L +   +G +
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSG-VKLDSITFASFLPSVLKSGSL 395

Query: 606 DDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAER------------------ 646
                +   +V  +G +P + +L S ++D+  + G ++ A +                  
Sbjct: 396 KYCKEVHSYIVR-HG-VPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453

Query: 647 --VINSQHIQARSDNWW--------------ALFSACAAHGNLRLGR 677
             V+N  +++A +   W              ++  ACAA  +L+LG+
Sbjct: 454 GYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGK 500


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 223/707 (31%), Positives = 372/707 (52%), Gaps = 42/707 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S+ G+ ++AL +FV +       P+ + L++ + AC  L     G QLH + +R+G    
Sbjct: 104 SQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGF--- 160

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                                       + DVY  T+ +   +K G+++ A  VFD++ +
Sbjct: 161 ----------------------------DQDVYVGTSLIDFYSKNGNIEEARLVFDQLSE 192

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           +    +  +I G T+ G   + + LF +M + +V  D Y  +SVLS C     LE G+Q+
Sbjct: 193 KTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQI 252

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+ V + G    VSVVN LI  Y  C  V    K+F++    V + IS+  M+ G     
Sbjct: 253 HAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM--VVKNIISWTTMISGYMQNS 310

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
              EA+  F +M     +P      SV+++C        G QVHA  +K+  E+   V N
Sbjct: 311 FDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKN 370

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             I MY+    + +A  +F  + E++++S+N MI  Y+ +     A+  + EM+     P
Sbjct: 371 GLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPP 430

Query: 388 DEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
              TF SLL  S     +E+ + IH  +   G+  ++   +ALI  Y+K   +K A  +F
Sbjct: 431 SLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVF 490

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M+ ++I+ WN +  G+  +    + L+ +S L  S  +P+E+T +  +++ + ++SLR
Sbjct: 491 EEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLR 550

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           HG+Q H  ++K  L     + NA++ +YAKCG ++ + ++FN  I +D + WN++IS +A
Sbjct: 551 HGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHA 610

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHGE +EA+  F+ M   G I+P+  TF AVLSACSHAG V+DG   F+SM   +G  P 
Sbjct: 611 QHGEAEEALGMFREMMKEG-IQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPG 668

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H +C++ LLGR+G L EA+  I    I+  +  W +L SAC   GN+ LG+  A + +
Sbjct: 669 TEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAI 728

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +      Y+LLSNI+A+ G+W +   +R+ +  + V+K+PG SWI
Sbjct: 729 STDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 775



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/559 (29%), Positives = 282/559 (50%), Gaps = 15/559 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +     ++ C+K   VD A  VFDKMP ++L  +++M++  ++ GY +  + +F ++ 
Sbjct: 61  DTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ 120

Query: 182 KLDVRRDN-YSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           +      N +  ASV+  C   G++E G QLH  V +SGF   V V  +LI  Y   GN+
Sbjct: 121 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 180

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A  VF++        +++  ++ G    GR   +L  F  M   ++ P      SV+S
Sbjct: 181 EEARLVFDQLSEKTA--VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLS 238

Query: 300 ACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G Q+HA  ++ G E   SV N  I  Y+ C ++     +F ++  K+I+S
Sbjct: 239 ACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIIS 298

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF 413
           W TMIS Y Q +    A+  + EM  +G +PD F   S+L S G  E +E    +HA+  
Sbjct: 299 WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTI 358

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              + ++  V N LI  YAK+  +  A ++F  M+ +N+I++N +I G+       + L+
Sbjct: 359 KANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALE 418

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F E+ +    P   T    L   A + +L   KQIHG ++K  +   +  G+A+I +Y+
Sbjct: 419 LFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYS 478

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  +  +  VF  M EKD + WNA+   Y QH E +EA+  +  +Q   R KP++ TF 
Sbjct: 479 KCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ-FSRQKPNEFTFA 537

Query: 594 AVLSACSHAGLVDDGTRIFDSMVN-DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
           A+++A S+   +  G +  + +V     F P   +   ++D+  + G ++EA ++ NS  
Sbjct: 538 ALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSS- 594

Query: 653 IQARSDNWWALFSACAAHG 671
           I      W ++ S  A HG
Sbjct: 595 IWRDVVCWNSMISTHAQHG 613



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 185/335 (55%), Gaps = 8/335 (2%)

Query: 284 VASLRPSELTFVSVMSACLC--PRVGYQV-HAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           + +LRP    F +++   +   P + Y++ H Q + SG ++ T ++N  I + S   ++D
Sbjct: 20  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 79

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASS 399
            A ++F ++  K++++W++M+S Y+Q+     A++ ++++Q   G  P+EF   S++ + 
Sbjct: 80  NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 139

Query: 400 ---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
              G +E    +H FV  +G   ++ V  +LI  Y+KN  I++A  +F  +S +  +TW 
Sbjct: 140 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 199

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           T+I G+   G     L+ F+++  + + PD Y +S  LS+C+ +  L  GKQIH YVL+ 
Sbjct: 200 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 259

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                +S+ N +I  Y KC  +    ++F+ M+ K+ ISW  +IS Y Q+    EA+  F
Sbjct: 260 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 319

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
             M  +G  KPD    T+VL++C     ++ G ++
Sbjct: 320 GEMNRLG-WKPDGFACTSVLTSCGSREALEQGRQV 353



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 113/235 (48%), Gaps = 12/235 (5%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           L +  LRP     +  L      + + H K IHG ++ + L S   L N +I + +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D +  VF+ M  K+ I+W++++S Y+Q G  +EA+  F  +Q      P++    +V+ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC+  G+V+ G ++   +V   GF       + ++D   + G ++EA R++  Q  +  +
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTA 195

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLL---EREQD-KPSVYVLLSNIYAAAGLWE 708
             W  + +     G  + GR    L L    RE +  P  YV +S++ +A  + E
Sbjct: 196 VTWTTIIA-----GYTKCGRSAVSLELFAQMRETNVVPDRYV-VSSVLSACSMLE 244


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/706 (31%), Positives = 370/706 (52%), Gaps = 44/706 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G ++  + +F+Q+     +  D  + +  L +C++L +   G Q+H  A++ G      
Sbjct: 152 NGDHRKVIDVFLQMGRMGTVF-DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVV 210

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
             + +L +Y   + L                               D + + F  MP+++
Sbjct: 211 TGSALLDMYAKCKKL-------------------------------DCSIQFFHSMPEKN 239

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLH 211
              ++A+I GC +N     G+ LF+EM K  V     +FASV   C AGL  L  G QLH
Sbjct: 240 WVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC-AGLSALRLGSQLH 298

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K+ F   V +  A + MY  C N+ DA K+F     +  +  SYN ++ G A   +
Sbjct: 299 GHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNH--NLQSYNAIIVGYARSDK 356

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
             EAL  FR +  + L   E++      AC   +    G QVH  +MKS  ++   V+NA
Sbjct: 357 GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 416

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG + EAC++F  +  +D VSWN +I+ + Q       +  ++ M   G+ PD
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 476

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           EFT+GS+L +    + +     IH  +  + +  +  V  ALI  Y+K   +++A ++  
Sbjct: 477 EFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHD 536

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            ++ + +++WN +I+GF L     +  + FS++L   + PD +T +  L +CA + ++  
Sbjct: 537 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 596

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GKQIH  ++K  L S   + + ++ +Y+KCG++     +F     +D ++WNA++  YAQ
Sbjct: 597 GKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG G+EA+  F+ MQ +  +KP+ ATF AVL AC H GLV+ G   F SM+++YG  P  
Sbjct: 657 HGLGEEALKIFEYMQ-LENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 715

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H SC++D++GR+G + +A  +I     +A +  W  L S C  HGN+ +    A  +L+
Sbjct: 716 EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQ 775

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +  + YVLLSNIYA AG+W E   +R++++  G+ K+PGCSWI
Sbjct: 776 LEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWI 821



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 172/639 (26%), Positives = 305/639 (47%), Gaps = 29/639 (4%)

Query: 49  SSHKLKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           SS++  P    + S     C++ +    G Q HA  +    K    V N ++ +Y    D
Sbjct: 33  SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSD 92

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L    +VF  +   D  SW   L      G +  A ++FD MP+RD+  +N++I+G   N
Sbjct: 93  LEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHN 152

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVS 224
           G     I +F +M ++    D  +FA VL  C +  LE    G Q+H L  K GF C V 
Sbjct: 153 GDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSS--LEDHGGGIQIHGLAVKMGFDCDVV 210

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
             +AL+ MY  C  +  + + F        + +S++ ++ G      +   L  F++M  
Sbjct: 211 TGSALLDMYAKCKKLDCSIQFFHSMPEK--NWVSWSAIIAGCVQNDDLRGGLELFKEMQK 268

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           A +  S+ TF SV  +C      R+G Q+H  A+K+ F     +  A + MY  C  + +
Sbjct: 269 AGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSD 328

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT----FGSLLA 397
           A  +F  L   ++ S+N +I  YA+ + G  A+  +  +Q  G+  DE +    F +   
Sbjct: 329 AQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAV 388

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             G +E ++ +H     +   +NI V+NA++  Y K   + +A  +F  M  R+ ++WN 
Sbjct: 389 IKGDLEGLQ-VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNA 447

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I     NG   + L  F  +L S + PDE+T    L +CA   +L  G +IH  ++K+ 
Sbjct: 448 IIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSR 507

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L     +G A+I +Y+KCG ++ + ++ + + E+  +SWNA+IS ++   + +EA   F 
Sbjct: 508 LGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFS 567

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLG 636
            M ++G + PD  T+  +L  C++   V+ G +I   ++     + ++ ++S  L D+  
Sbjct: 568 KMLEMG-VDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYS 624

Query: 637 RAGYLDE----AERVINSQHIQARSDNWWALFSACAAHG 671
           + G + +     E+  N   +      W A+    A HG
Sbjct: 625 KCGNMQDFQLIFEKAPNRDFV-----TWNAMVCGYAQHG 658



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 208/452 (46%), Gaps = 49/452 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   +RS    +AL +F  +  S  L  D  SLS    ACA ++    G Q+H
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKS-GLGLDEVSLSGAFRACAVIKGDLEGLQVH 399

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             ++++  ++   VAN IL +Y     LV    VF E+ + D  SW              
Sbjct: 400 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSW-------------- 445

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NA+I    +NG E+  + LF  M +  +  D +++ SVL  C 
Sbjct: 446 -----------------NAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC- 487

Query: 201 AGL--LEFGRQLHSLVTKS--GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           AG   L  G ++H+ + KS  G    V +  ALI MY  CG +  A K+ +         
Sbjct: 488 AGWQALNCGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQTV-- 543

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           +S+N ++ G +   + EEA   F  ML   + P   T+ +++  C   +   +G Q+HAQ
Sbjct: 544 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 603

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K   ++   +S+  + MYS CG + +  +IF +   +D V+WN M+  YAQ  LG  A
Sbjct: 604 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 663

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALIS 429
           +  +  MQ   ++P+  TF ++L + G + +VE      H+ +   G+   ++  + ++ 
Sbjct: 664 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 723

Query: 430 AYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
              ++ ++ +A ++   M    + + W TL++
Sbjct: 724 IMGRSGQVSKALELIEGMPFEADAVIWRTLLS 755



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 195/423 (46%), Gaps = 52/423 (12%)

Query: 293 TFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC----------- 336
           TF  +   C     LCP  G Q HA+ + + F+    V+N  I MY  C           
Sbjct: 44  TFSHIFQECSDRKALCP--GKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101

Query: 337 --------------------GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
                               G I  A  +F  + E+D+VSWN++IS Y      R  I  
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK 433
           +L+M  +G   D  TF  +L S   +E       IH      G   ++   +AL+  YAK
Sbjct: 162 FLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAK 221

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
            +++  + Q FH+M  +N ++W+ +I G + N     GL+ F E+  + +   + T +  
Sbjct: 222 CKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
             SCA +S+LR G Q+HG+ LK +  + + +G A + +Y KC +L  + ++FN +   + 
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI-- 611
            S+NA+I  YA+  +G EA+  F+ +Q  G +  D+ + +    AC+      +G ++  
Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFRLLQKSG-LGLDEVSLSGAFRACAVIKGDLEGLQVHG 400

Query: 612 --FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
               S+      +      + +LD+ G+ G L EA  V   + +   + +W A+ +A   
Sbjct: 401 LSMKSLCQSNICVA-----NAILDMYGKCGALVEACLVFE-EMVSRDAVSWNAIIAAHEQ 454

Query: 670 HGN 672
           +GN
Sbjct: 455 NGN 457


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/694 (32%), Positives = 366/694 (52%), Gaps = 38/694 (5%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL LF Q+       P+ ++ S+ L ACA L    FG  +  + ++ G      V   I+
Sbjct: 232 ALDLFCQM-CCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAII 290

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            LY   RD+                               D A + F +MP R++  +  
Sbjct: 291 DLYAKCRDM-------------------------------DQAVKEFLRMPIRNVVSWTT 319

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           +I+G  +          F+EM K+  + +NY+  SVL+ C +  +++   QLHS + K+G
Sbjct: 320 IISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTG 379

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F    +V +ALI MY   G V  + +VF E +    +   + VM+   A  G    A+  
Sbjct: 380 FYLDSNVSSALINMYSKIGVVDLSERVFREMES-TKNLAMWAVMISAFAQSGSTGRAVEL 438

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           F+ ML   LRP +    SV+S      +G  +H   +K G     SV ++  TMYS CG 
Sbjct: 439 FQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGS 498

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           ++E+  +F ++ +KD VSW +MI+ +++ +    A+  + EM    IRPD+ T  + L +
Sbjct: 499 LEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTA 558

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
              +  +E    +H +     +   + V  AL++ Y+K   I  A ++F  +  ++  + 
Sbjct: 559 CSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSC 618

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           ++L++G+  NG+    L  F E+ M++L  D +T+S  + + A ++SL  G Q+H  V K
Sbjct: 619 SSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTK 678

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L +++S+G++++T+Y+KCG +D   +VF  + + D ISW A+I +YAQHG+G EA+  
Sbjct: 679 MGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKV 738

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           +  M+  G  KPD  TF  VLSACSH G+V++G    +SM  +YG  P   H +CM+DLL
Sbjct: 739 YDLMRKEG-TKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLL 797

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GR+G L EAER IN+  I+  +  W  L +AC  HG++ LGR+ A  ++E E  +   YV
Sbjct: 798 GRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYV 857

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            LSNI A  G WE+   IR L++ TGV K+PG S
Sbjct: 858 TLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWS 891



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 184/715 (25%), Positives = 358/715 (50%), Gaps = 48/715 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  NI ++  +++  ++D+   F ++  S    P+ ++  + L+AC  L +  +G  ++
Sbjct: 112 VISWNILISGCNQNFSFEDSWRNFCKMRFS-GFDPNQFTYGSVLSACTALGSPLYGELVY 170

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           + AL+ G  +  +V   ++ L+          RVF ++   +V  W              
Sbjct: 171 SLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCW-------------- 216

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NA+I+G  +N    + + LF +M       ++++F+S+L+ C 
Sbjct: 217 -----------------NAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACA 259

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           A   LEFGR +   V K G    V V  A+I +Y  C ++  A K F   +  + + +S+
Sbjct: 260 ALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF--LRMPIRNVVSW 317

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
             ++ G         A   F++M     + +  T  SV++AC  P   +   Q+H+   K
Sbjct: 318 TTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFK 377

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAIL 375
           +GF   ++VS+A I MYS  G +D +  +F  ++  K++  W  MIS +AQ      A+ 
Sbjct: 378 TGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVE 437

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            +  M   G+RPD+F   S+L+    + +  +IH ++   G+ T+I V ++L + Y+K  
Sbjct: 438 LFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCG 497

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++++Y +F  M  ++ ++W ++I GF  +    Q +Q F E+L+ E+RPD+ TL+ AL+
Sbjct: 498 SLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALT 557

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +C+ + SL  GK++HGY L+  +  ++ +G A++ +Y+KCG +  + RVF+M+ +KD  S
Sbjct: 558 ACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFS 617

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            ++L+S YAQ+G  ++A+  F  ++ +  +  D  T ++V+ A +    +D GT++  + 
Sbjct: 618 CSSLVSGYAQNGYIEDALLLFHEIR-MADLWIDSFTVSSVIGAVAILNSLDIGTQL-HAC 675

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
           V   G        S ++ +  + G +DE  +V   Q  +    +W A+  + A HG    
Sbjct: 676 VTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFE-QIEKPDLISWTAMIVSYAQHGKGAE 734

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEA-ANIRELLKRTGVIKQPG 727
              +   L+ +E  KP     +  + A +  G+ EE  +++  + K  G+  +PG
Sbjct: 735 ALKVYD-LMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGI--EPG 786



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 231/490 (47%), Gaps = 18/490 (3%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           + N+L+  Y    ++V A ++F++      + IS+N+++ G       E++   F  M  
Sbjct: 83  MTNSLMGWYCKSNSMVHALRLFDKTPHP--NVISWNILISGCNQNFSFEDSWRNFCKMRF 140

Query: 285 ASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           +   P++ T+ SV+SAC     P  G  V++ A+K+GF +   V    I +++     ++
Sbjct: 141 SGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFED 200

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A  +F  +  +++V WN +IS   +      A+  + +M      P+ FTF S+L +   
Sbjct: 201 ALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAA 260

Query: 402 IEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +E +E    +  +V   G   ++ V  A+I  YAK   + QA + F  M  RN+++W T+
Sbjct: 261 LEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTI 320

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+GF+     +     F E+     + + YT++  L++C     ++   Q+H ++ K   
Sbjct: 321 ISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGF 380

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
               ++ +A+I +Y+K G +D S RVF  M   K+   W  +ISA+AQ G    AV  F+
Sbjct: 381 YLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQ 440

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G ++PD+   ++VLS      L     R+    +   G        S +  +  +
Sbjct: 441 RMLQEG-LRPDKFCSSSVLSIIDSLSL----GRLIHCYILKIGLFTDISVGSSLFTMYSK 495

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVL 696
            G L+E+  V   Q     + +W ++ +  + H +     ++   +LL  E+ +P    L
Sbjct: 496 CGSLEESYTVFE-QMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLL--EEIRPDQMTL 552

Query: 697 LSNIYAAAGL 706
            + + A + L
Sbjct: 553 TAALTACSAL 562



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 310 VHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           +HA  +K+   ++ T ++N+ +  Y     +  A  +F +    +++SWN +IS   Q  
Sbjct: 67  LHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNF 126

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSN 425
               +   + +M+  G  P++FT+GS+L++    G     E++++    NG  +N  V  
Sbjct: 127 SFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRA 186

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            +I  +AK    + A ++F ++   N++ WN +I+G + N      L  F ++      P
Sbjct: 187 GMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMP 246

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           + +T S  L++CA +  L  G+ + G+V+K      + +G A+I LYAKC D+D +++ F
Sbjct: 247 NSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEF 306

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M  ++ +SW  +IS + Q  +   A   FK M+ VG  K +  T T+VL+AC+   ++
Sbjct: 307 LRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGE-KINNYTITSVLTACTEPVMI 365

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            +  ++  S +   GF    +  S ++++  + G +D +ERV            W  + S
Sbjct: 366 KEAVQL-HSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424

Query: 666 ACAAHGN 672
           A A  G+
Sbjct: 425 AFAQSGS 431



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 56/412 (13%)

Query: 23  KLNISLANL----SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           K N+S A++    S   H + A+ LF ++    +++PD  +L+  L AC+ L +   G +
Sbjct: 512 KDNVSWASMITGFSEHDHAEQAVQLFREMLL-EEIRPDQMTLTAALTACSALHSLEKGKE 570

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H YALRA +     V   ++++Y     +V  +RVF                       
Sbjct: 571 VHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVF----------------------- 607

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-S 197
                   D +P +D    +++++G  +NGY +  + LF E+   D+  D+++ +SV+ +
Sbjct: 608 --------DMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGA 659

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           V     L+ G QLH+ VTK G +  VSV ++L+TMY  CG++ +  KVFE+ +    D I
Sbjct: 660 VAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKP--DLI 717

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGY-QVHAQ 313
           S+  M+   A  G+  EAL  +  M     +P  +TFV V+SAC        GY  +++ 
Sbjct: 718 SWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSM 777

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNL 369
           A + G E         + +    G++ EA      +  E D + W  +++    +    L
Sbjct: 778 AKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIEL 837

Query: 370 GRSAILAYLEMQSVGIRPDE----FTFGSLLASSGFIEMVEMIHAFVFINGI 417
           GR A    +E++     P E     T  ++ A  G+ E V  I + +   G+
Sbjct: 838 GRLAAKRVIELE-----PCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGV 884


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 241/719 (33%), Positives = 382/719 (53%), Gaps = 56/719 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFV-QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           LN S+    R     +AL LF  Q+        D  +++  L AC    ++  G Q+HA+
Sbjct: 46  LNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG--DSKLGCQIHAF 103

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A+ +G  ++  V N+++++Y  A        VF  + NPD+ SW T LS   +       
Sbjct: 104 AISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR------- 156

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
                                       D  +     M+   V  D  +  +VL+ C D 
Sbjct: 157 ---------------------------SDDALNFALRMNFTGVAFDAVTCTTVLAFCSDH 189

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
               FG QLHS + K G  C V V NALITMY  C  +V+A +VF+E +    D +S+N 
Sbjct: 190 EGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNK--DLVSWNA 247

Query: 262 MMDGLASVGRVE-EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
           M+ G A  G    EA++ F +ML   ++   ++F   +SAC   +   +G Q+H+ A+K 
Sbjct: 248 MLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKI 307

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G++ +  V N  I+ YS C  I++A ++F  + ++++VSW TMIS   +      A   +
Sbjct: 308 GYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLF 362

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            EM+  G+ P++ TF  L+ +      +E  +MIH        ++ + VSN+LI+ YAK 
Sbjct: 363 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 422

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           E +  + ++F  ++ R II+WN+LI+G+  NG   + LQ F   LM E RP+E+T    L
Sbjct: 423 ESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALM-ESRPNEFTFGSVL 481

Query: 495 SSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           SS A     S+RHG++ H ++LK  L +   + +A++ +YAK G +  SL VF+    K+
Sbjct: 482 SSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKN 541

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ++W A+ISA+A+HG+ +  ++ FK M+  G +KPD  TF AV++AC   G+VD G ++F
Sbjct: 542 EVAWTAIISAHARHGDYEAVMNLFKDMEREG-VKPDSITFLAVITACGRKGMVDTGYQLF 600

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +SMV D+   P+ +H S M+D+LGRAG L EAE  +      A      +L  AC  HGN
Sbjct: 601 NSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGN 660

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + + +A  L+E E      YVL+SN+YA  G WE+ A IR+ ++  GV K+ G SW+
Sbjct: 661 VDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 719



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 183/676 (27%), Positives = 310/676 (45%), Gaps = 105/676 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  L+   RS    DAL+  ++++ +  +  D  + +T LA C++     FG QLH
Sbjct: 144 IVSWNTVLSGFQRS---DDALNFALRMNFT-GVAFDAVTCTTVLAFCSDHEGFIFGFQLH 199

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  L+ GL     V N ++++Y     LV  +RVF E++N D+ SW              
Sbjct: 200 SRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSW-------------- 245

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC 199
                            NAM++G  + G   +  I +F EM K  ++ D+ SF   +S C
Sbjct: 246 -----------------NAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC 288

Query: 200 DAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-- 256
             G   E GRQ+HSL  K G+   V V N LI+ Y  C ++ DA  VFE     + D   
Sbjct: 289 GHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFES----IIDRNV 344

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +S+  M+    S+   E+A   F +M    + P+++TFV ++ A     +   G  +H  
Sbjct: 345 VSWTTMI----SISE-EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGV 399

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K+ F +  +VSN+ ITMY+    + ++  +F  L  ++I+SWN++IS YAQ  L + A
Sbjct: 400 CVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEA 459

Query: 374 ILAYLE--MQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNA 426
           +  +L   M+S   RP+EFTFGS+L+S    E + M      H+ +   G+ TN  VS+A
Sbjct: 460 LQTFLSALMES---RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSA 516

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  YAK   I ++  +F     +N + W  +I+    +G     +  F ++    ++PD
Sbjct: 517 LLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPD 576

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS---------LGNA---------- 527
             T    +++C R   +  G Q+   ++K++LI             LG A          
Sbjct: 577 SITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFV 636

Query: 528 -----------MITLYAKC---GDLDCSLRVFNMMIEKDTI---SWNALISAYAQHGEGK 570
                      + +L   C   G++D + RV + +IE + +   S+  + + YA+ GE +
Sbjct: 637 GQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWE 696

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           +     K M++ G  K    ++  V  A        DG+       +D  F P  + +  
Sbjct: 697 KVAKIRKGMRERGVRKEIGFSWVDVGDA--------DGSLYLHGFSSDDKFHPQSEEIYR 748

Query: 631 MLDLLGRAGYLDEAER 646
           M + LG      E ER
Sbjct: 749 MAETLGLEMKFLEKER 764


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/643 (32%), Positives = 356/643 (55%), Gaps = 8/643 (1%)

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N +L+    +  +   +++F ++   D YSW T +S+   +G +  A E+FD    +  
Sbjct: 68  TNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
             ++++I+G  + G +     LFR M     +   ++  SVL VC + GL++ G  +H  
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K+GF   V VV  L+ MY  C  V +A  +F+  +    +H+ +  M+ G A  G   
Sbjct: 188 VVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 247

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           +A+  FR M    +  ++ TF ++++AC   L    G QVH   +KSGF +   V +A +
Sbjct: 248 KAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALV 307

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG +  A  +   +++ D+VSWN+++  + +  L   A+  +  M    ++ D++
Sbjct: 308 DMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDY 367

Query: 391 TFGSLLASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           TF S+L     G I   + +H  +   G      VSNAL+  YAK   +  AY +F  M 
Sbjct: 368 TFPSVLNCCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKML 426

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            +++I+W +L+ G+  N    + L+ F ++ ++ + PD++ ++  LS+CA ++ L  GKQ
Sbjct: 427 EKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQ 486

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H   +K+ L    S+ N+++ +YAKCG LD +  +F  M  KD I+W A+I  YAQ+G+
Sbjct: 487 VHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGK 546

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G+ ++  + AM   G  +PD  TF  +L ACSHAGLVD+G + F  M   YG  P  +H 
Sbjct: 547 GRNSLKFYDAMVSSG-TRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHY 605

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +CM+DL GR+G LDEA+++++   ++  +  W +L SAC  H NL L    A  L E E 
Sbjct: 606 ACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEP 665

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                YV+LSN+Y+A+  W + A IR+L+K  G++K+PGCSW+
Sbjct: 666 MNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWL 708



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 212/437 (48%), Gaps = 43/437 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G    A+  F  +H+   ++ + Y+  T L AC+++    FG Q+H + +++G  + 
Sbjct: 241 AQNGDGYKAVEFFRYMHA-QGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN 299

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            +V + ++ +Y    DL + K +   +++ DV SW                         
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW------------------------- 334

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
                 N+++ G   +G E+  + LF+ MH  +++ D+Y+F SVL+ C  G +   + +H
Sbjct: 335 ------NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSIN-PKSVH 387

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L+ K+GF     V NAL+ MY   G++  A  VFE  K    D IS+  ++ G A    
Sbjct: 388 GLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFE--KMLEKDVISWTSLVTGYAQNNS 445

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            EE+L  F DM V  + P +    S++SAC        G QVH   +KSG     SV N+
Sbjct: 446 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 505

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG +D+A  IF  +Q KD+++W  +I  YAQ   GR+++  Y  M S G RPD
Sbjct: 506 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPD 565

Query: 389 EFTFGSLLASSGFIEMVEMIHAFV----FINGIITNIQVSNALISAYAKNERIKQAYQIF 444
             TF  LL +     +V+    +      + GI    +    +I  + ++ ++ +A Q+ 
Sbjct: 566 FITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 625

Query: 445 HNMSPR-NIITWNTLIN 460
             M  + +   W +L++
Sbjct: 626 DQMDVKPDATVWKSLLS 642



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 163/320 (50%), Gaps = 45/320 (14%)

Query: 321 AYTSV--SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR------- 371
           +Y S+  +N  +   S  G++++A  +F ++ +KD  SWNTMIS+Y   N+GR       
Sbjct: 61  SYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYV--NVGRLVEAREL 118

Query: 372 --------------------------SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
                                      A   +  M+  G +  +FT GS+L   +S G I
Sbjct: 119 FDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLI 178

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLIN 460
           +  EMIH FV  NG   N+ V   L+  YAK + + +A  +F  +    +N + W  ++ 
Sbjct: 179 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 238

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  NG   + ++ F  +    +  ++YT    L++C+ + +   G+Q+HG+++K+   S
Sbjct: 239 GYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGS 298

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + + +A++ +YAKCGDL  +  +   M + D +SWN+L+  + +HG  +EA+  FK M 
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 358

Query: 581 DVGR-IKPDQATFTAVLSAC 599
             GR +K D  TF +VL+ C
Sbjct: 359 --GRNMKIDDYTFPSVLNCC 376



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 165/380 (43%), Gaps = 53/380 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +    R G  ++AL LF  +H  + +K D Y+  + L  C  +  +     +H
Sbjct: 331 VVSWNSLMVGFVRHGLEEEALRLFKNMHGRN-MKIDDYTFPSVLNCC--VVGSINPKSVH 387

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ G + Y  V+N ++ +Y    D+     VF ++   DV SWT+            
Sbjct: 388 GLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTS------------ 435

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                              ++TG  +N   +  + +F +M    V  D +  AS+LS C 
Sbjct: 436 -------------------LVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACA 476

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +  LLEFG+Q+H    KSG     SV N+L+ MY  CG + DA  +F   +  V D I++
Sbjct: 477 ELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ--VKDVITW 534

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ--- 313
             ++ G A  G+   +L  +  M+ +  RP  +TF+ ++ AC    +   G +   Q   
Sbjct: 535 TAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNK 594

Query: 314 --AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMIS---TYAQR 367
              +K G E Y  +    I ++   GK+DEA  +  ++  K D   W +++S    +   
Sbjct: 595 VYGIKPGPEHYACM----IDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENL 650

Query: 368 NLGRSAILAYLEMQSVGIRP 387
            L   A     E++ +   P
Sbjct: 651 ELAERAATNLFELEPMNAMP 670



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 87/174 (50%), Gaps = 9/174 (5%)

Query: 18  KELLLKLNISLANL----SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +++L K  IS  +L    +++  ++++L +F  +  +  + PD + +++ L+ACA L   
Sbjct: 423 EKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT-GVNPDQFIVASILSACAELTLL 481

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            FG Q+H   +++GL+    V N+++++Y     L     +F  +Q  DV +WT  +   
Sbjct: 482 EFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGY 541

Query: 134 TKMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            + G    + + +D M       D   +  ++  C+  G  D G   F++M+K+
Sbjct: 542 AQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKV 595


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/715 (31%), Positives = 371/715 (51%), Gaps = 45/715 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L     SG+ ++A+ L   +H S K   D  +L + L  CA+ ++   G ++  +  
Sbjct: 65  NTQLRRFCESGNLKNAVKL---LHVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G     ++ + +  +Y N  DL    RVF +++      W   ++   K G  D++  
Sbjct: 122 GNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAKSG--DFSG- 178

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGL 203
                                        IGLF++M    V  D+Y+F+ V  S      
Sbjct: 179 ----------------------------SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G QLH  + KSGF    SV N+L+  Y     V  A KVF+E      D IS+N ++
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTER--DVISWNSII 268

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
           +G  S G  E+ L  F  ML + +     T VSV + C   R   +G  VH   +K+ F 
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                 N  + MYS CG +D A ++F  +  + +VS+ +MI+ YA+  L   A+  + EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  GI PD +T  ++L   A +  ++  + +H ++  N +  +I VSNAL+  YAK   +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSS 496
           ++A  +F  M  ++II+WNT+I G+  N +  + L  F+ LL+ +   PDE T++  L +
Sbjct: 449 REAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPA 508

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA +S+   G++IHGY+++N   S   + N+++ +YAKCG L  +  +F+ +  KD +SW
Sbjct: 509 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSW 568

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
             +I+ Y  HG GKEA++ F  M+  G I+PD+ +F ++L ACSH+GLVD+G R F+ M 
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAG-IEPDEISFVSLLYACSHSGLVDEGWRFFNIMR 627

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
           ++    P  +H +C++D+L R G L +A R I +  I   +  W AL   C  H +++L 
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +A  + E E +    YVL++NIYA A  WEE   +R+ + + G+ K PGCSWI
Sbjct: 688 ERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWI 742



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 280/591 (47%), Gaps = 51/591 (8%)

Query: 19  ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           E  L  NI +  L++SG +  ++ LF ++ SS  ++ D Y+ S    + ++LR+   G Q
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVNGGEQ 216

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH Y L++G      V N++++ Y     + S ++VF E+   DV SW            
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISW------------ 264

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              N++I G   NG  + G+ +F +M    +  D  +  SV + 
Sbjct: 265 -------------------NSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAG 305

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C D+ L+  GR +H    K+ FS      N L+ MY  CG++  A  VF E  G     +
Sbjct: 306 CADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSV--V 363

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SY  M+ G A  G   EA+  F +M    + P   T  +V++ C   R+   G +VH   
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423

Query: 315 MKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            ++  GF+ +  VSNA + MY+ CG + EA ++F+ ++ KDI+SWNT+I  Y++      
Sbjct: 424 KENDMGFDIF--VSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481

Query: 373 AI-LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           A+ L  L +      PDE T   +L   AS    +    IH ++  NG  ++  V+N+L+
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK   +  A  +F +++ +++++W  +I G+ ++GF  + +  F+++  + + PDE 
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFN 546
           +    L +C+    +  G +    +     I       A ++ + A+ G+L  + R + N
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIEN 661

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           M I  D   W AL+     H + K A    +  + V  ++P+   +  +++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAE---RVAEKVFELEPENTGYYVLMA 709


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/685 (32%), Positives = 360/685 (52%), Gaps = 43/685 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD Y+    +  C  L N   G  +    L  G      VA++++ LY +          
Sbjct: 8   PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADN--------- 58

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G ++ A   FDKM D+D  ++N MI G  + G  D  I
Sbjct: 59  ----------------------GCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAI 96

Query: 175 GLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LF++M   + + D+ +FA VLS+ C   ++E+GRQLH LV +SG   +  V N L+T+Y
Sbjct: 97  KLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVY 156

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
                + DA K+F+       D + +N M+ G    G +++A + F +M+ A ++P  +T
Sbjct: 157 SKGRQLGDARKLFDMMPQI--DLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSIT 214

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F S + +       +   ++H   ++ G      +++A I +Y  C     AC +F    
Sbjct: 215 FTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLST 274

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--- 407
           + DIV +  MIS Y    + + A+  +  +    + P+  TF S+L +   +  +++   
Sbjct: 275 KFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRE 334

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H ++  N +     V +A+++ YAK  R+  A+ IF  +S ++ I WN++I  F  +G 
Sbjct: 335 LHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGK 394

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           P + +  F ++ M  ++ D  T+S ALS+CA I +L +GK+IHG+++K    S +   +A
Sbjct: 395 PEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSA 454

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +YAKCG L+ +  VFN+M EK+ ++WN++I+AY  HG   ++++ F  M + G I+P
Sbjct: 455 LINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEG-IQP 513

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAER 646
           D  TF  +LS+C HAG V+DG R F  M  +YG IPA+ +H +CM DL GRAG+LDEA  
Sbjct: 514 DHITFLTILSSCGHAGQVEDGVRYFRCMTEEYG-IPAQMEHYACMADLFGRAGHLDEAFE 572

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           VI S      +  W  L  AC  HGN+ L  + +  LL+ E      Y+LL+++ A AG 
Sbjct: 573 VITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGK 632

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W     I+ L+K  GV K PGCSWI
Sbjct: 633 WRSVHKIQHLMKERGVQKVPGCSWI 657



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 261/552 (47%), Gaps = 43/552 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +    + G    A+ LF  + SS   KPD  + +  L+   +     +G QLH   +
Sbjct: 80  NVMINGYVQCGESDSAIKLFKDMMSSEA-KPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+GL   P V NT++++Y   R L   +++F                             
Sbjct: 139 RSGLDFVPLVGNTLVTVYSKGRQLGDARKLF----------------------------- 169

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
             D MP  DL V+N MI G  +NG+ D    LF EM    ++ D+ +F S L S+ ++  
Sbjct: 170 --DMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSS 227

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+  +++H  + + G    V + +ALI +YF C + V ACK+F  +  +  D + Y  M+
Sbjct: 228 LKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKF--DIVIYTAMI 285

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G    G  ++AL  FR +L   + P+ LTF S++ AC      ++G ++H   +K+  E
Sbjct: 286 SGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELE 345

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V +A + MY+ CG++D A +IF R+  KD + WN++I++++Q      AI  + +M
Sbjct: 346 EKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQM 405

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              G++ D  T  + L++   I  +   + IH F+      +++   +ALI+ YAK  ++
Sbjct: 406 GMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKL 465

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  +F+ M  +N + WN++I  +  +G+    L  F  +L   ++PD  T    LSSC
Sbjct: 466 NIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSC 525

Query: 498 ARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
                +  G +       +  + ++M     M  L+ + G LD +  V   M      S 
Sbjct: 526 GHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASV 585

Query: 556 WNALISAYAQHG 567
           W  L+ A   HG
Sbjct: 586 WGTLLGACRVHG 597



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 198/382 (51%), Gaps = 14/382 (3%)

Query: 282 MLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           ML   + P + TF  V+  C      R+G  +    ++ GF+    V+++ I +Y+  G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA- 397
           I++A   F ++ +KD V WN MI+ Y Q     SAI  + +M S   +PD  TF  +L+ 
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 398 --SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
             S   +E    +H  V  +G+     V N L++ Y+K  ++  A ++F  M   +++ W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N +I G++ NGF       F+E++ + ++PD  T +  L S A  SSL+  K+IHGY+++
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVR 240

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           + +I  + L +A+I LY KC D   + ++FN+  + D + + A+IS Y  +G  K+A+  
Sbjct: 241 HGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEI 300

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCML 632
           F+ +    ++ P+  TF+++L AC+    +  G  +   ++ +      E+     S ++
Sbjct: 301 FRWLLQ-KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKN----ELEEKCPVGSAIM 355

Query: 633 DLLGRAGYLDEAERVINSQHIQ 654
           ++  + G LD A  +     I+
Sbjct: 356 NMYAKCGRLDLAHLIFGRISIK 377


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/705 (31%), Positives = 371/705 (52%), Gaps = 55/705 (7%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y++  HL V          D Y+    L AC  + +   G ++H  A++ G  ++  V N
Sbjct: 46  YREMRHLGVSF--------DSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVN 97

Query: 97  TILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           ++++LY    D+   +++F  +    DV SW                             
Sbjct: 98  SLVALYAKCNDINGARKLFDRMYVRNDVVSW----------------------------- 128

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
             N++I+  + NG     + LF EM K  V  + Y+FA+ L  C D+  ++ G Q+H+ +
Sbjct: 129 --NSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAI 186

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            KSG    V V NAL+ MY   G + +A  +F   +G   D +++N M+ G    G   E
Sbjct: 187 LKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGK--DIVTWNSMLTGFIQNGLYSE 244

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGFEAYTSVSNAA 329
           AL  F D+  A L+P +++ +S++ A    R+GY     ++HA A+K+GF++   V N  
Sbjct: 245 ALEFFYDLQNADLKPDQVSIISIIVAS--GRLGYLLNGKEIHAYAIKNGFDSNILVGNTL 302

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I MY+ C  +      F  +  KD++SW T  + YAQ      A+    ++Q  G+  D 
Sbjct: 303 IDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362

Query: 390 FTFGS-LLASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
              GS LLA  G   +  ++ IH +  I G +++  + N +I  Y +   I  A +IF +
Sbjct: 363 TMIGSILLACRGLNCLGKIKEIHGYT-IRGGLSDPVLQNTIIDVYGECGIIDYAVRIFES 421

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +  +++++W ++I+ ++ NG   + L+ FS +  + L PD  TL   LS+   +S+L+ G
Sbjct: 422 IECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKG 481

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IHG++++   I + S+ N ++ +YA+CG ++ + ++F     ++ I W A+ISAY  H
Sbjct: 482 KEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMH 541

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G+ AV  F  M+D  +I PD  TF A+L ACSH+GLV++G    + M  +Y   P  +
Sbjct: 542 GYGEAAVELFMRMKD-EKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPE 600

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +C++DLLGR   L+EA +++ S   +   + W AL  AC  H N  +G + A  LLE 
Sbjct: 601 HYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLEL 660

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + D P  YVL+SN++AA G W++   +R  +K +G+ K PGCSWI
Sbjct: 661 DLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWI 705



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 185/601 (30%), Positives = 313/601 (52%), Gaps = 31/601 (5%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A  +FDKM +R +  +NAM+ G   NG     + ++REM  L V  D+Y+F  
Sbjct: 4   KCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPV 63

Query: 195 VLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           +L  C  G++E    G ++H L  K G    V VVN+L+ +Y  C ++  A K+F+  + 
Sbjct: 64  LLKAC--GIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFD--RM 119

Query: 252 YV-CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVG 307
           YV  D +S+N ++   +  G   EAL  F +ML A +  +  TF + + AC      ++G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+HA  +KSG      V+NA + MY   GK+ EA +IF  L+ KDIV+WN+M++ + Q 
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
            L   A+  + ++Q+  ++PD+ +  S++ +SG +  +   + IHA+   NG  +NI V 
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N LI  YAK   +    + F  M+ +++I+W T   G+  N   +Q L+   +L M  + 
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            D   +   L +C  ++ L   K+IHGY ++  L S   L N +I +Y +CG +D ++R+
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRI 418

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  +  KD +SW ++IS Y  +G   +A+  F +M++ G ++PD  T  ++LSA      
Sbjct: 419 FESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETG-LEPDYVTLVSILSAVCSLST 477

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WW 661
           +  G  I   ++   GFI      + ++D+  R G +++A ++        ++ N   W 
Sbjct: 478 LKKGKEIHGFIIRK-GFILEGSISNTLVDMYARCGSVEDAYKIFTC----TKNRNLILWT 532

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDK--PSVYVLLSNIYAA--AGLWEEAANIRELL 717
           A+ SA   HG    G     L +  + +K  P     L+ +YA   +GL  E  +  E++
Sbjct: 533 AMISAYGMHG---YGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIM 589

Query: 718 K 718
           K
Sbjct: 590 K 590



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 232/449 (51%), Gaps = 14/449 (3%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG+V+DA  +F++         ++N MM G  S G    AL  +R+M    +    
Sbjct: 1   MYGKCGSVLDAEMIFDKMSER--SIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDS 58

Query: 292 LTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF  ++ AC        G ++H  A+K G +++  V N+ + +Y+ C  I+ A  +F R
Sbjct: 59  YTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDR 118

Query: 349 LQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM 404
           +  + D+VSWN++IS Y+   +   A+  + EM   G+  + +TF + L +   S FI++
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              IHA +  +G + ++ V+NAL++ Y +  ++ +A  IF N+  ++I+TWN+++ GF+ 
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NG   + L+ F +L  ++L+PD+ ++   + +  R+  L +GK+IH Y +KN   S + +
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GN +I +YAKC  +    R F++M  KD ISW    + YAQ+    +A+   + +Q  G 
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEG- 357

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +  D     ++L AC     +     I    +   G +      + ++D+ G  G +D A
Sbjct: 358 MDVDATMIGSILLACRGLNCLGKIKEIHGYTIR--GGLSDPVLQNTIIDVYGECGIIDYA 415

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNL 673
            R+  S  I+ +    W    +C  H  L
Sbjct: 416 VRIFES--IECKDVVSWTSMISCYVHNGL 442



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/490 (24%), Positives = 214/490 (43%), Gaps = 42/490 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S +G   +AL LF ++  +  +  + Y+ +  L AC +      G Q+HA  L
Sbjct: 129 NSIISAYSGNGMCTEALCLFSEMLKA-GVVTNTYTFAAALQACEDSSFIKLGMQIHAAIL 187

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++G     +VAN ++++Y     +     +F  ++  D+ +W                  
Sbjct: 188 KSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTW------------------ 229

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                        N+M+TG  +NG     +  F ++   D++ D  S  S++      G 
Sbjct: 230 -------------NSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGY 276

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+++H+   K+GF   + V N LI MY  C  +    + F+       D IS+    
Sbjct: 277 LLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHK--DLISWTTAA 334

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G A      +AL   R + +  +        S++ AC    C     ++H   ++ G  
Sbjct: 335 AGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS 394

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + N  I +Y  CG ID A  IF  ++ KD+VSW +MIS Y    L   A+  +  M
Sbjct: 395 D-PVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM 453

Query: 381 QSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+ PD  T  S+L+   S   ++  + IH F+   G I    +SN L+  YA+   +
Sbjct: 454 KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSV 513

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + AY+IF     RN+I W  +I+ + ++G+    ++ F  +   ++ PD  T    L +C
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573

Query: 498 ARISSLRHGK 507
           +    +  GK
Sbjct: 574 SHSGLVNEGK 583



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 194/445 (43%), Gaps = 51/445 (11%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N   + ++  N  L    ++G Y +AL  F  + ++  LKPD  S+ + + A   L    
Sbjct: 220 NLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNA-DLKPDQVSIISIIVASGRLGYLL 278

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++HAYA++ G  +   V NT++ +Y     +    R F  + + D+ SWTT      
Sbjct: 279 NGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTT-----A 333

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G+    C +                            + L R++    +  D     S
Sbjct: 334 AAGYAQNKCYL--------------------------QALELLRQLQMEGMDVDATMIGS 367

Query: 195 VLSVCDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAK 250
           +L  C  GL   G  +++H    + G S  V + N +I +Y  CG +  A ++FE  E K
Sbjct: 368 ILLAC-RGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYGECGIIDYAVRIFESIECK 425

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RV 306
               D +S+  M+      G   +AL  F  M    L P  +T VS++SA +C     + 
Sbjct: 426 ----DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSA-VCSLSTLKK 480

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G ++H   ++ GF    S+SN  + MY+ CG +++A  IF   + ++++ W  MIS Y  
Sbjct: 481 GKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGM 540

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQV--- 423
              G +A+  ++ M+   I PD  TF +LL +     +V    +F+ I      ++    
Sbjct: 541 HGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPE 600

Query: 424 -SNALISAYAKNERIKQAYQIFHNM 447
               L+    +   +++AYQI  +M
Sbjct: 601 HYTCLVDLLGRRNCLEEAYQIVKSM 625


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/597 (36%), Positives = 329/597 (55%), Gaps = 17/597 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFG 207
           MP R++  +N++I+G T+ G+    + LF+E    D+R D ++F++ LSVC   L L  G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +H+L+T SG    V + N+LI MY  CG +  A  VFE A     D +S+N ++ G  
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL--DSVSWNSLIAGYV 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAY 322
            +G  +E L     ML   L  +     S + AC          G  +H  A+K G +  
Sbjct: 119 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 178

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-----RNLGRSAILAY 377
             V  A +  Y+  G +++A  IF  + + ++V +N MI+ + Q           A+  +
Sbjct: 179 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 238

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKN 434
            EMQS G++P EFTF S+L +   IE  E    IHA +F   + ++  + NAL+  Y+ +
Sbjct: 239 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLS 298

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             I+   + FH+    ++++W +LI G + NG    GL  F ELL S  +PDE+T+S+ L
Sbjct: 299 GSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIML 358

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S+CA +++++ G+QIH Y +K  + +   + N+ I +YAKCGD+D +   F      D +
Sbjct: 359 SACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIV 418

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SW+ +IS+ AQHG  KEAV  F+ M+  G I P+  TF  VL ACSH GLV++G R F+ 
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSG-IAPNHITFLGVLVACSHGGLVEEGLRYFEI 477

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  D+G  P   H +C++DLLGRAG L EAE  I     +     W +L SAC  H    
Sbjct: 478 MKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATD 537

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+ +A  ++E E +  + YVLL NIY  AG+   A  IR L+K  GV K+PG SWI
Sbjct: 538 TGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 594



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 144/615 (23%), Positives = 266/615 (43%), Gaps = 54/615 (8%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  ++  ++ G Y + ++LF +   S  L+ D ++ S  L+ C    +   G 
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMS-DLRLDKFTFSNALSVCGRTLDLRLGR 61

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +HA    +GL     + N+++ +Y                                K G
Sbjct: 62  LIHALITVSGLGGPVLLTNSLIDMY-------------------------------CKCG 90

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            +D+A  VF+   + D   +N++I G    G  D  + L  +M +  +  ++Y+  S L 
Sbjct: 91  RIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALK 150

Query: 198 VCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            C +     +E G+ LH    K G    V V  AL+  Y   G++ DA K+F+       
Sbjct: 151 ACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDP-- 208

Query: 255 DHISYNVMMDGLASVGRV-----EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV--- 306
           + + YN M+ G   +  +      EA+  F +M    ++PSE TF S++ AC        
Sbjct: 209 NVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFEC 268

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+HAQ  K   ++   + NA + +YS  G I++    F    + D+VSW ++I  + Q
Sbjct: 269 GKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQ 328

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQV 423
                  +  + E+   G +PDEFT   +L++   +  V   E IHA+    GI     +
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTII 388

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N+ I  YAK   I  A   F      +I++W+ +I+    +G   + +  F  +  S +
Sbjct: 389 QNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGI 448

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL-DCS 541
            P+  T    L +C+    +  G +    + K++ I+     +A ++ L  + G L +  
Sbjct: 449 APNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAE 508

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD-QATFTAVLSACS 600
             + +   E D + W +L+SA   H   K   +  +  + V  ++P+  A++  + +  +
Sbjct: 509 SFIMDSGFEGDPVMWRSLLSACRVH---KATDTGKRVAERVIELEPEAAASYVLLYNIYN 565

Query: 601 HAGLVDDGTRIFDSM 615
            AG+    T I + M
Sbjct: 566 DAGIQMPATEIRNLM 580


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 242/738 (32%), Positives = 389/738 (52%), Gaps = 49/738 (6%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLST 62
           +I AT +  S    E L+  N  + +L R+  Y++AL  F   Q +SS K++   Y   +
Sbjct: 14  QIPATSSVVSTIKTEELM--NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYI--S 69

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            + AC++ R+ A G ++H + L +  K    + N ILS+Y                    
Sbjct: 70  LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG------------------- 110

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                       K G +  A EVFD MP+R+L  Y ++ITG ++NG E   I L+ +M +
Sbjct: 111 ------------KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQ 158

Query: 183 LDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            D+  D ++F S++  C  AG +  G+QLH+ V K   S  +   NALI MY     + D
Sbjct: 159 ADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 218

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSA 300
           A KVF        D IS++ ++ G + +G   EAL   ++ML      P+E  F S + A
Sbjct: 219 ASKVFYGIPAK--DLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKA 276

Query: 301 C---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C   L P  G Q+H   +K           +   MY+ CG +D A  +F +++  D  SW
Sbjct: 277 CSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASW 336

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFI 414
           N +I+  A       A+  + EM++ G  PD  +  SLL A +  + + +   IH+F+  
Sbjct: 337 NVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIK 396

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQ 473
            G + ++ V N+L++ Y     +   + +F +   + + ++WN ++   L +  PV+ L+
Sbjct: 397 CGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPVEMLR 456

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +L+SE  PD  T+   L  C  ISSL+ G Q+H Y  K  L+ +  + N +I +YA
Sbjct: 457 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSWKTGLVLEQFIKNGLIDMYA 516

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG L  + R+F+ M   D +SW+ LI  YAQ G G+EA+  F+ M+  G I+P+  TF 
Sbjct: 517 KCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGEEALILFREMKSSG-IEPNHVTFV 575

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            VL+ACSH GLV++G +++  M  ++G  P ++H SC++DLL RAG+L+EAER I+   +
Sbjct: 576 GVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCVVDLLARAGHLNEAERFIDEMKL 635

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +     W  L SAC   GN+ L +  A  +L+ +    + +VLL +++A++G WE+AA +
Sbjct: 636 EPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWEDAALL 695

Query: 714 RELLKRTGVIKQPGCSWI 731
           R  +K+  V K PG SWI
Sbjct: 696 RSSMKKHDVKKIPGQSWI 713


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 230/722 (31%), Positives = 365/722 (50%), Gaps = 46/722 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPD-----IYSLSTTLAACANLRNAAF 75
           L+    +++  ++ G   DAL LF    S+    PD      + L++ L ACA  R A F
Sbjct: 96  LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H  A + GL A   V   +++LY                                K
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLY-------------------------------AK 184

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G +D A  VFD +P R+   + A+ITG ++ G   + + LF  M    VR D +  AS 
Sbjct: 185 AGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASA 244

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            S C   G +E GRQ+H    ++      SVVNALI +Y  C  ++ A ++F+  +    
Sbjct: 245 ASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENR-- 302

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           + +S+  M+ G        EA+  F  +  A  +P      S++++C        G QVH
Sbjct: 303 NLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVH 362

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  +K+  E+   V NA I MY+ C  + EA  +F  L E D +S+N MI  YA+     
Sbjct: 363 AHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLT 422

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  + +M+   ++P   TF SLL   +S   +E+ + IH  +  +G   ++   +ALI
Sbjct: 423 GAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALI 482

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y+K   +  A  +F  M  R+++ WN +I G   N    + ++ F+ L +S L P+E+
Sbjct: 483 DVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEF 542

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T    ++  + ++S+ HG+Q H  ++K    S   + NA+I +YAKCG ++    +F   
Sbjct: 543 TFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFEST 602

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
           + KD I WN++IS YAQHG  +EA+  F  M+  G ++P+  TF +VLSAC+HAGLVD+G
Sbjct: 603 LGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAG-VEPNYVTFVSVLSACAHAGLVDEG 661

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
              F+SM   Y   P  +H + +++L GR+G L  A+  I    I+  +  W +L SAC 
Sbjct: 662 LHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACH 721

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
             GN+ +GR    + L  +       VL+SNIYA+ GLW +A  +R+ +   GV+K+PG 
Sbjct: 722 LFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGY 781

Query: 729 SW 730
           SW
Sbjct: 782 SW 783



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/607 (27%), Positives = 293/607 (48%), Gaps = 25/607 (4%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PD++     L   +K+G +  A  +FD MP R+L  + + I+   ++G ED  + LF   
Sbjct: 63  PDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGREDDALLLFAAF 122

Query: 181 HKLDVRR------DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                        + +  AS L  C  +    FG Q+H +  K G    V V  AL+ +Y
Sbjct: 123 PSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLY 182

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G +  A  VF+       + +++  ++ G +  G+   AL  F  M +  +RP    
Sbjct: 183 AKAGRIDAAMSVFDALPAR--NPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFV 240

Query: 294 FVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S  SAC        G Q+H  A ++  E+  SV NA I +Y  C ++  A  +F  ++
Sbjct: 241 LASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSME 300

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EM 407
            +++VSW TMI+ Y Q +L   A+  + ++   G +PD F   S+L S G +  +     
Sbjct: 301 NRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQ 360

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA V    + ++  V NALI  YAK E + +A  +F  ++  + I++N +I G+   G 
Sbjct: 361 VHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGD 420

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               ++ F ++    L+P   T    L   +  S L   KQIHG ++K+     +  G+A
Sbjct: 421 LTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSA 480

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+K   +D +  VF++M  +D + WNA+I   AQ+  G+EAV  F  ++ V  + P
Sbjct: 481 LIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLR-VSGLTP 539

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAER 646
           ++ TF A+++  S    +  G + F + +   G   ++ H+S  ++D+  + G+++E  R
Sbjct: 540 NEFTFVALVTVASTLASIFHGQQ-FHAQIIKAG-ADSDPHISNALIDMYAKCGFIEEG-R 596

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--- 703
           ++    +      W ++ S  A HG+      + G ++E    +P+ YV   ++ +A   
Sbjct: 597 LLFESTLGKDVICWNSMISTYAQHGHAEEALHVFG-MMEGAGVEPN-YVTFVSVLSACAH 654

Query: 704 AGLWEEA 710
           AGL +E 
Sbjct: 655 AGLVDEG 661



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 208/424 (49%), Gaps = 17/424 (4%)

Query: 191 SFASVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           S A +L  C AG  L       H+    SG    + + N L+  Y   G + DA ++F+ 
Sbjct: 31  SLAQLLLSCLAGDRLRRVLPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDS 90

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL------RPSELTFVSVMSACL 302
                 + +S+   +   A  GR ++AL+ F     A         P+E    S + AC 
Sbjct: 91  MPSR--NLVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACA 148

Query: 303 ---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                R G QVH  A K G +A   V  A + +Y+  G+ID A  +F  L  ++ V+W  
Sbjct: 149 QSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTA 208

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFING 416
           +I+ Y+Q      A+  +  M   G+RPD F   S  ++    GF+E    IH + +   
Sbjct: 209 VITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTA 268

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++  V NALI  Y K  R+  A ++F +M  RN+++W T+I G++ N    + +  F 
Sbjct: 269 AESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFW 328

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +L  +  +PD +  +  L+SC  ++++  G+Q+H +V+K +L S   + NA+I +YAKC 
Sbjct: 329 QLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCE 388

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            L  +  VF  + E D IS+NA+I  YA+ G+   AV  F  M+    +KP   TF ++L
Sbjct: 389 HLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYC-SLKPSLLTFVSLL 447

Query: 597 SACS 600
              S
Sbjct: 448 GVSS 451


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/672 (31%), Positives = 352/672 (52%), Gaps = 41/672 (6%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C  LR+A  G Q+  + +++G +   +  NT++ L+    +++  ++ F  ++N  V +W
Sbjct: 71  CMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTW 130

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
                                          NA+I G  + G+      LFR+M    + 
Sbjct: 131 -------------------------------NAIIAGYAQLGHVKEAFALFRQMVDEAME 159

Query: 187 RDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
               +F  VL  C +   L+ G++ H+ V K GF     +  AL++MY   G++  A +V
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F+    Y  D  ++NVM+ G A  G  E+A   F  M     +P+ ++F+S++  C  P 
Sbjct: 220 FDGL--YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPE 277

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G  VHAQ M +G      V+ A I MY  CG I+ A  +F +++ +D+VSW  MI 
Sbjct: 278 ALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIR 337

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            YA+ +    A   +  MQ  GI+PD  T+  ++   ASS  + +   IH+ V   G  T
Sbjct: 338 GYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGT 397

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ V  AL+  YAK   IK A Q+F  MS R++++W+ +I  ++ NG   +  + F  + 
Sbjct: 398 DLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMK 457

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            + + PD  T    L++C  + +L  G +I+   +K +L+S + +GNA+I +  K G ++
Sbjct: 458 RNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIE 517

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  +F  M+++D ++WN +I  Y+ HG  +EA+  F  M    R +P+  TF  VLSAC
Sbjct: 518 RARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLK-ERFRPNSVTFVGVLSAC 576

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           S AG V++G R F  +++  G +P  +   CM+DLLGRAG LDEAE +IN   ++  S  
Sbjct: 577 SRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSI 636

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W  L +AC  +GNL +    A   L  E    +VYV LS++YAAAG+WE  A +R++++ 
Sbjct: 637 WSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMES 696

Query: 720 TGVIKQPGCSWI 731
            GV K+ GC+WI
Sbjct: 697 RGVRKEQGCTWI 708



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 272/562 (48%), Gaps = 43/562 (7%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +   + ++  N  +A  ++ GH ++A  LF Q+     ++P I +    L AC++     
Sbjct: 121 SVENKTVVTWNAIIAGYAQLGHVKEAFALFRQM-VDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G + HA  ++ G  +   +   ++S+Y                                
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMY-------------------------------V 208

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +D A +VFD +  RD+  +N MI G  ++G  +    LF  M +   + +  SF S
Sbjct: 209 KGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLS 268

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L  C     L +G+ +H+    +G    V V  ALI MY  CG++  A +VF++ K  V
Sbjct: 269 ILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK--V 326

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            D +S+ VM+ G A    +E+A   F  M    ++P  +T++ +++AC       +  ++
Sbjct: 327 RDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREI 386

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+Q +++GF     V  A + MY+ CG I +A  +F  +  +D+VSW+ MI  Y +   G
Sbjct: 387 HSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCG 446

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNAL 427
             A   +  M+   + PD  T+ +LL + G +  +++   I+       ++++I V NAL
Sbjct: 447 EEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNAL 506

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+   K+  I++A  IF NM  R+++TWN +I G+ L+G   + L  F  +L    RP+ 
Sbjct: 507 INMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNS 566

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLD-CSLRVF 545
            T    LS+C+R   +  G++   Y+L    ++  M L   M+ L  + G+LD   L + 
Sbjct: 567 VTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLIN 626

Query: 546 NMMIEKDTISWNALISAYAQHG 567
            M ++ ++  W+ L++A   +G
Sbjct: 627 RMPLKPNSSIWSTLLAACRIYG 648



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 2/165 (1%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  T       C  +     GKQ+  +++++     +   N +I L++ CG++  + + F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + +  K  ++WNA+I+ YAQ G  KEA + F+ M D   ++P   TF  VL ACS    +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEA-MEPSIITFLIVLDACSSPAGL 178

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             G   F + V   GF+      + ++ +  + G +D A +V + 
Sbjct: 179 KLGKE-FHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG 222


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/689 (32%), Positives = 360/689 (52%), Gaps = 41/689 (5%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           ++L   IY+ S  +  C  L +    + +  +    G       +N +LS       +  
Sbjct: 2   YRLNLGIYTFSRKV--CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDD 59

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
            +++F  + + D  SW T + A    G ++ A ++F + P R    ++++I+G    G +
Sbjct: 60  ARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCD 119

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNAL 229
              + LF EM     R + +++ SVL VC    LLE G+Q+H+   K+ F     VV  L
Sbjct: 120 VEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGL 179

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + MY  C  +++A  +FE A     +H+ +  M+ G +  G   +A+  FRDM    +  
Sbjct: 180 VDMYAKCKCILEAEYLFELAPDKR-NHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIEC 238

Query: 290 SELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           ++ TF S+++AC     C   G QVH   ++SGF A   V +A + MYS CG +  A  +
Sbjct: 239 NQFTFPSILTACGSISACG-FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRM 297

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
              ++  D VSWN+MI    ++ LG  A+  +  M    ++ DEFT+ S+L    F+  +
Sbjct: 298 LETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDM 357

Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                +H+ +   G      V+NAL+  YAK      A+ +F  M+ +++I+W +L+ G 
Sbjct: 358 RNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGC 417

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + NG   + L+ F E+ +  + PD+  ++  LS+CA ++ L  GKQ+H   LK+ L S +
Sbjct: 418 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSL 477

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           S+ N+++++YAKCG ++ + +VF+ M  +D I+W ALI  YAQ+G G++           
Sbjct: 478 SVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD----------- 526

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
                             HAGLV+ G   F SM   YG  P  +H +CM+DLLGR+G L 
Sbjct: 527 ------------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLM 568

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EA+ ++N   +Q  +  W AL +AC  HGN+ LG   A  L E E      YVLLSN+Y+
Sbjct: 569 EAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYS 628

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AAG WEEAA  R L+K  GV K+PGCSWI
Sbjct: 629 AAGKWEEAAKTRRLMKLRGVSKEPGCSWI 657


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/631 (31%), Positives = 347/631 (54%), Gaps = 16/631 (2%)

Query: 112 KRVFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
           K +F  I+N   PD + W++ ++   K   +  A +V ++MP +D+  +N  ++      
Sbjct: 10  KIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPY 69

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVN 227
                + LF  M    +R + + FAS++S   + G   +G  +H+ V K GF   + + N
Sbjct: 70  PLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISN 129

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           A +TMY    +V +  + F   K  + +++ S N ++ G       ++       +LV  
Sbjct: 130 AFVTMYMKTQSVENGWQFF---KAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG 186

Query: 287 LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
             P+  TF+S++  C        G  +H Q +KSG    + + N+ + +Y+ CG  + AC
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 246

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F  + E+D+VSW  +I+ +     G S +  + +M + G  P+ +TF S+L S   + 
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 305

Query: 404 MVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            V++   +HA +  N +  N  V  AL+  YAKN  ++ A  IF+ +  R++  W  ++ 
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  +G   + ++ F ++    ++P+E+TL+ +LS C+RI++L  G+Q+H   +K     
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 425

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            M + +A++ +YAKCG ++ +  VF+ ++ +DT+SWN +I  Y+QHG+G +A+  F+AM 
Sbjct: 426 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAML 485

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           D G + PD+ TF  VLSACSH GL+++G + F+S+   YG  P  +H +CM+D+LGRAG 
Sbjct: 486 DEGTV-PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGK 544

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
             E E  I    + +    W  +  AC  HGN+  G   A  L E E +  S Y+LLSN+
Sbjct: 545 FHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNM 604

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +AA G+W++  N+R L+   GV K+PGCSW+
Sbjct: 605 FAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 635



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 171/399 (42%), Gaps = 62/399 (15%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y   L +F Q+  +    P++Y+  + L +C++L +   G Q+HA  ++  L     V  
Sbjct: 272 YGSGLRIFNQM-LAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT 330

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ +Y   R L   + +F+ +   D+++WT                             
Sbjct: 331 ALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV---------------------------- 362

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
              ++ G  ++G  +  +  F +M +  V+ + ++ AS LS C     L+ GRQLHS+  
Sbjct: 363 ---IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAI 419

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEE 274
           K+G S  + V +AL+ MY  CG V DA  VF+   G V  D +S+N ++ G +  G+  +
Sbjct: 420 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFD---GLVSRDTVSWNTIICGYSQHGQGGK 476

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN------- 327
           AL  F  ML     P E+TF+ V+SAC         H   ++ G + + S+S        
Sbjct: 477 ALKAFEAMLDEGTVPDEVTFIGVLSAC--------SHMGLIEEGKKHFNSLSKIYGITPT 528

Query: 328 -----AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSAILAYL 378
                  + +    GK  E       ++   +++ W T++     +     G  A +   
Sbjct: 529 IEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF 588

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
           E++   I  +     ++ A+ G  + V  + A +   G+
Sbjct: 589 ELEP-EIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGV 626



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 81/170 (47%), Gaps = 5/170 (2%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  L    + +A  ++ G  + A+  F+Q+     +KP+ ++L+++L+ C+ +     G 
Sbjct: 354 KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQRE-GVKPNEFTLASSLSGCSRIATLDSGR 412

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           QLH+ A++AG      VA+ ++ +Y     +   + VF  + + D  SW T +   ++ G
Sbjct: 413 QLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHG 472

Query: 138 HVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
               A + F+ M D     D   +  +++ C+  G  + G   F  + K+
Sbjct: 473 QGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 522



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 39/235 (16%)

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+I   V+KN +     L ++++ +Y KC  L C+ +V   M  +D   WN  +S+    
Sbjct: 9   KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI--------FDSMV-- 616
              +EAV  F  M+   RI+ +Q  F +++SA +  G    G  I        F+S +  
Sbjct: 69  YPLQEAVQLFYLMRHT-RIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILI 127

Query: 617 ---------------NDYGFIPAE--DHLSCMLDLLGRAGY-----LDEAERVINSQHIQ 654
                          N + F  A   ++L+   +LL  +G+      D+  R++    ++
Sbjct: 128 SNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLL--SGFCDTETCDQGPRILIQLLVE 185

Query: 655 ARSDNWWALFS---ACAAHGNLRLGRIIAGLLLEREQDKPS-VYVLLSNIYAAAG 705
               N +   S    CA+ G+L  G+ I G +++   +  S ++  L N+YA  G
Sbjct: 186 GFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/736 (31%), Positives = 386/736 (52%), Gaps = 53/736 (7%)

Query: 13  NSNTSKELLLKL------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA 66
            +N  + +L KL      N  + +L +   + +A+  F  +         + + +  ++A
Sbjct: 13  TNNVKETVLSKLRAEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISA 72

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVA--NTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           C+ LR+   G ++H + L++  K++P +   N IL++Y   + L   ++VF         
Sbjct: 73  CSYLRSLEHGKKIHDHMLKS--KSHPDLTLQNHILNMYGKCKSLKDAQKVF--------- 121

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
                                 D MP+R++  + ++I G ++NG     +  + +M +  
Sbjct: 122 ----------------------DAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSG 159

Query: 185 VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  D ++F S++  C + G +  GRQLH+ V KS F   +   NALI+MY     ++DA 
Sbjct: 160 VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDAL 219

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSAC- 301
            VF  ++    D IS+  M+ G + +G   EAL  F++ML   +  P+E  F SV SAC 
Sbjct: 220 DVF--SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 302 --LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             L P  G Q+H  ++K G         +   MY+ CG +  A ++F ++   D+V+WN 
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNA 337

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFING 416
           +I+ +A     + AI  + +M+  G+ PDE T  SLL A +   E+ +   +H ++   G
Sbjct: 338 IIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG 397

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHF 475
           +  ++ V N L++ YAK   ++ A   F  M    ++++WN ++   + +    +  +  
Sbjct: 398 LDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLL 457

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + +S+ RPD  TL+  L + A   S+  G Q+H Y LK  L    S+ N +I LYAKC
Sbjct: 458 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKC 517

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L  + ++F+ MI  D +SW++LI  YAQ G G+EA+  FK M+ +  +KP+  TF  V
Sbjct: 518 GSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD-VKPNHVTFVGV 576

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L+ACSH GLV++G +++ +M  ++G  P  +H SCM+DLL RAG L+EAE  I+      
Sbjct: 577 LTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDP 636

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W  L +AC  HGN+ +G+  A  +L+ +    + +VLL NIYA+ G WE+ A +R 
Sbjct: 637 DIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRS 696

Query: 716 LLKRTGVIKQPGCSWI 731
           L+K+ GV K PG SWI
Sbjct: 697 LMKQRGVRKVPGQSWI 712


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/708 (32%), Positives = 365/708 (51%), Gaps = 42/708 (5%)

Query: 32  SRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           ++ G  +DA+ LF     +S    P+ + L++ L ACA  R  +FG Q+H  A+R GL  
Sbjct: 88  AQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDG 147

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             +V   +++LY                                K+G +D A  VFD +P
Sbjct: 148 NVYVGTALINLY-------------------------------AKVGCIDAAMLVFDALP 176

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQ 209
            ++   + A+ITG ++ G   + + LF +M    VR D +  AS +S C A G LE GRQ
Sbjct: 177 VKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQ 236

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            H    +       SV+NALI +Y  C  +  A K+F+  +    + +S+  M+ G    
Sbjct: 237 THGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENR--NLVSWTTMIAGYMQN 294

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
               EA+  F  +     +P      S++++C        G QVHA A+K+  E+   V 
Sbjct: 295 SCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVK 354

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N+ I MY+ C  + EA  +F  L E D +S+N MI  Y++      AI  + +M+   ++
Sbjct: 355 NSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLK 414

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P   TF SLL   +S   IE+ + IH  +  +G   ++   ++LI  Y+K   ++ A  +
Sbjct: 415 PSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAV 474

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ M  R+++ WN +I G   N    + ++ F++L +S L P+E+T    ++  + + S+
Sbjct: 475 FNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSM 534

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            HG+Q H  ++K    S   + NA+I +YAKCG +     +F   + KD I WN++IS Y
Sbjct: 535 FHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTY 594

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           AQHG+ +EA+  F+ M   G ++P+  TF  VLSAC+HAGLVD+G R FD M   Y   P
Sbjct: 595 AQHGQAEEALYVFRMMGGTG-VEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEP 653

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H + +++L GR+G L  A+  I    I+  +  W +L SAC   GN+ +GR    + 
Sbjct: 654 GTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMA 713

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L  +       VL+SNIYA+ GLW +A  +R+ +   GV+K+PG SWI
Sbjct: 714 LLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWI 761



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 168/624 (26%), Positives = 304/624 (48%), Gaps = 30/624 (4%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PD++     L A +K+G V  A  +FD+MP ++L  + + I+   ++G E+  + LF   
Sbjct: 44  PDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAF 103

Query: 181 HKLDVRR--DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            +       + +  AS L  C  +  + FG+Q+H +  + G    V V  ALI +Y   G
Sbjct: 104 QRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVG 163

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A  VF+     V + +++  ++ G + +G+   AL  F  M +  +RP      S 
Sbjct: 164 CIDAAMLVFDALP--VKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASA 221

Query: 298 MSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +SAC        G Q H  A +   E   SV NA I +Y  C ++  A  +F  ++ +++
Sbjct: 222 VSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNL 281

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAF 411
           VSW TMI+ Y Q +    A+  + ++   G +PD F   S+L S G +  +     +HA 
Sbjct: 282 VSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAH 341

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
                + ++  V N+LI  YAK E + +A  +F  ++  + I++N +I G+   G     
Sbjct: 342 AIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGA 401

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           +  FS++    L+P   T    L   +  S++   KQIHG ++K+     +  G+++I +
Sbjct: 402 IDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDV 461

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y+K   ++ +  VFN+M  +D + WNA+I   AQ+ +G+EAV  F  +Q V  + P++ T
Sbjct: 462 YSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQ-VSGLAPNEFT 520

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAERVINS 650
           F A+++  S    +  G + F + +   G   ++ H+S  ++D+  + G++ E  R++  
Sbjct: 521 FVALVTVASTLVSMFHGQQ-FHAQIIKAG-ADSDHHVSNALIDMYAKCGFIKEG-RLLFE 577

Query: 651 QHIQARSDNWWALFSACAAHGN----LRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--- 703
             +      W ++ S  A HG     L + R++ G  +E     P+ YV    + +A   
Sbjct: 578 STLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVE-----PN-YVTFVGVLSACAH 631

Query: 704 AGLWEEAANIRELLKRTGVIKQPG 727
           AGL +E     + +K    I +PG
Sbjct: 632 AGLVDEGLRHFDFMKTKYAI-EPG 654



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA+A+ +G      ++N  +  YS  G++ +A  +F R+  K++VSW + IS +AQ    
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 371 RSAILAYLEMQ--SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
             A+  +   Q  S G  P+EF   S L   A S  +   + +H      G+  N+ V  
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI+ YAK   I  A  +F  +  +N +TW  +I G+   G     L+ F ++ +  +RP
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D + L+ A+S+C+ +  L  G+Q HGY  +  + +  S+ NA+I LY KC  L  + ++F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + M  ++ +SW  +I+ Y Q+    EA++ F  +   G  +PD     ++L++C     +
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEG-WQPDVFACASILNSCGSLAAI 332

Query: 606 DDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINS 650
             G ++    +     + +++++ + ++D+  +  +L EA  V  +
Sbjct: 333 WQGRQVHAHAIK--ANLESDEYVKNSLIDMYAKCEHLTEARAVFEA 376



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 123/219 (56%), Gaps = 3/219 (1%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
           S LA      ++ + HA   + G + ++ ++N L+ AY+K  R++ A ++F  M  +N++
Sbjct: 19  SCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLV 78

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +W + I+    +G     +  F+    +     P+E+ L+ AL +CA+  ++  G+Q+HG
Sbjct: 79  SWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHG 138

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
             ++  L   + +G A+I LYAK G +D ++ VF+ +  K+ ++W A+I+ Y+Q G+G  
Sbjct: 139 VAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGV 198

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           A+  F  M   G ++PD+    + +SACS  G ++ G +
Sbjct: 199 ALELFGKMGLDG-VRPDRFVLASAVSACSALGFLEGGRQ 236



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 95/203 (46%), Gaps = 14/203 (6%)

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H   +    +  + L N ++  Y+K G +  + R+F+ M  K+ +SW + IS +AQHG  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 570 KEAVSCFKAMQDV-GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           ++AV+ F A Q   G   P++    + L AC+ +  V  G ++    V     I  + ++
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVR----IGLDGNV 149

Query: 629 ---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
              + +++L  + G +D A  V ++  ++     W A+ +  +  G    G +   L  +
Sbjct: 150 YVGTALINLYAKVGCIDAAMLVFDALPVK-NPVTWTAVITGYSQIGQ---GGVALELFGK 205

Query: 686 REQD--KPSVYVLLSNIYAAAGL 706
              D  +P  +VL S + A + L
Sbjct: 206 MGLDGVRPDRFVLASAVSACSAL 228


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/706 (32%), Positives = 381/706 (53%), Gaps = 64/706 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSV 111
           +KPD Y+    L A A+L++   G Q+HA+  + G       VANT+++LY+   D  +V
Sbjct: 93  IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYE 170
            +VF                               D++ +R+   +N++I+  C+   +E
Sbjct: 153 YKVF-------------------------------DRISERNQVSWNSLISSLCSFEKWE 181

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-----AGLLEFGRQLHSLVTKSGFSCLVSV 225
            + +  FR M   +V   +++  SV++ C       GL+  G+Q+H+   + G      +
Sbjct: 182 -MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-ELNSFI 238

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+ MY   G +  +  +     G   D +++N ++  L    ++ EAL   R+M++ 
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
            + P E T  SV+ AC      R G ++HA A+K+G  +  + V +A + MY +C ++  
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS-- 398
              +F  + ++ I  WN MI+ Y+Q    + A+L ++ M+ S G+  +  T   ++ +  
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG     E IH FV   G+  +  V N L+  Y++  +I  A +IF  M  R+++TWNT
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 458 LINGFLLNGFPVQGLQHFSELLMSE-----------LRPDEYTLSVALSSCARISSLRHG 506
           +I G++ +      L    ++   E           L+P+  TL   L SCA +S+L  G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IH Y +KNNL + +++G+A++ +YAKCG L  S +VF+ + +K+ I+WN +I AY  H
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G+EA+   + M   G +KP++ TF +V +ACSH+G+VD+G RIF  M  DYG  P+ D
Sbjct: 597 GNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           H +C++DLLGRAG + EA +++N       ++  W +L  A   H NL +G I A  L++
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +  S YVLL+NIY++AGLW++A  +R  +K  GV K+PGCSWI
Sbjct: 716 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 197/387 (50%), Gaps = 13/387 (3%)

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT-SVSN 327
           + EA++ + DM+V  ++P    F +++ A    +   +G Q+HA   K G+   + +V+N
Sbjct: 78  LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + +Y  CG       +F R+ E++ VSWN++IS+         A+ A+  M    + P
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197

Query: 388 DEFTFGSLLASSGFIEMVE------MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             FT  S++ +   + M E       +HA+    G + +  + N L++ Y K  ++  + 
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +  +   R+++TWNT+++    N   ++ L++  E+++  + PDE+T+S  L +C+ + 
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316

Query: 502 SLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            LR GK++H Y LKN  + + S +G+A++ +Y  C  +    RVF+ M ++    WNA+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y+Q+   KEA+  F  M++   +  +  T   V+ AC  +G       I   +V   G
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RG 435

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERV 647
                   + ++D+  R G +D A R+
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRI 462



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 142/269 (52%), Gaps = 9/269 (3%)

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-- 407
           Q +    W  ++ +  + NL R A+L Y++M  +GI+PD + F +LL +   ++ +E+  
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 408 -IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            IHA V+  G  + ++ V+N L++ Y K       Y++F  +S RN ++WN+LI+     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI---SSLRHGKQIHGYVLKNNLISKM 522
                 L+ F  +L   + P  +TL   +++C+ +     L  GKQ+H Y L+   ++  
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + N ++ +Y K G L  S  +      +D ++WN ++S+  Q+ +  EA+   + M   
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           G ++PD+ T ++VL ACSH  ++  G  +
Sbjct: 297 G-VEPDEFTISSVLPACSHLEMLRTGKEL 324



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 139/280 (49%), Gaps = 27/280 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  +A  S++ H ++AL LF+ +  S  L  +  +++  + AC  +R+ AF  +  +H +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--VRSGAFSRKEAIHGF 430

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            ++ GL     V NT++ +Y     +    R+F ++++ D+ +W T ++      H + A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA- 201
             +  KM + +  V                         ++ ++ ++ +  ++L  C A 
Sbjct: 491 LLLLHKMQNLERKVSKG--------------------ASRVSLKPNSITLMTILPSCAAL 530

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L  G+++H+   K+  +  V+V +AL+ MY  CG +  + KVF++      + I++NV
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK--NVITWNV 588

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           ++      G  +EA+   R M+V  ++P+E+TF+SV +AC
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/706 (32%), Positives = 381/706 (53%), Gaps = 64/706 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSV 111
           +KPD Y+    L A A+L++   G Q+HA+  + G       VANT+++LY+   D  +V
Sbjct: 6   IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYE 170
            +VF                               D++ +R+   +N++I+  C+   +E
Sbjct: 66  YKVF-------------------------------DRISERNQVSWNSLISSLCSFEKWE 94

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-----AGLLEFGRQLHSLVTKSGFSCLVSV 225
            + +  FR M   +V   +++  SV++ C       GL+  G+Q+H+   + G      +
Sbjct: 95  -MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-ELNSFI 151

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+ MY   G +  +  +     G   D +++N ++  L    ++ EAL   R+M++ 
Sbjct: 152 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSSLCQNEQLLEALEYLREMVLE 209

Query: 286 SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
            + P E T  SV+ AC      R G ++HA A+K+G  +  + V +A + MY +C ++  
Sbjct: 210 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 269

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS-- 398
              +F  + ++ I  WN MI+ Y+Q    + A+L ++ M+ S G+  +  T   ++ +  
Sbjct: 270 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 329

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG     E IH FV   G+  +  V N L+  Y++  +I  A +IF  M  R+++TWNT
Sbjct: 330 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 389

Query: 458 LINGFLLNGFPVQGLQHFSELLMSE-----------LRPDEYTLSVALSSCARISSLRHG 506
           +I G++ +      L    ++   E           L+P+  TL   L SCA +S+L  G
Sbjct: 390 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 449

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IH Y +KNNL + +++G+A++ +YAKCG L  S +VF+ + +K+ I+WN +I AY  H
Sbjct: 450 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 509

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G+EA+   + M   G +KP++ TF +V +ACSH+G+VD+G RIF  M  DYG  P+ D
Sbjct: 510 GNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 568

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           H +C++DLLGRAG + EA +++N       ++  W +L  A   H NL +G I A  L++
Sbjct: 569 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 628

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +  S YVLL+NIY++AGLW++A  +R  +K  GV K+PGCSWI
Sbjct: 629 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 674



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 126/239 (52%), Gaps = 9/239 (3%)

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGI-ITNIQVSNALISAYAKNE 435
           M  +GI+PD + F +LL +   ++ +E+   IHA V+  G  + ++ V+N L++ Y K  
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
                Y++F  +S RN ++WN+LI+           L+ F  +L   + P  +TL   ++
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 496 SCARI---SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           +C+ +     L  GKQ+H Y L+   ++   + N ++ +Y K G L  S  +      +D
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRD 179

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            ++WN ++S+  Q+ +  EA+   + M   G ++PD+ T ++VL ACSH  ++  G  +
Sbjct: 180 LVTWNTVLSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKEL 237



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 139/280 (49%), Gaps = 27/280 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  +A  S++ H ++AL LF+ +  S  L  +  +++  + AC  +R+ AF  +  +H +
Sbjct: 286 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--VRSGAFSRKEAIHGF 343

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            ++ GL     V NT++ +Y     +    R+F ++++ D+ +W T ++      H + A
Sbjct: 344 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 403

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA- 201
             +  KM + +  V                         ++ ++ ++ +  ++L  C A 
Sbjct: 404 LLLLHKMQNLERKVSKG--------------------ASRVSLKPNSITLMTILPSCAAL 443

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L  G+++H+   K+  +  V+V +AL+ MY  CG +  + KVF++      + I++NV
Sbjct: 444 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK--NVITWNV 501

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           ++      G  +EA+   R M+V  ++P+E+TF+SV +AC
Sbjct: 502 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 541


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/710 (32%), Positives = 376/710 (52%), Gaps = 50/710 (7%)

Query: 34  SGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SG   +AL ++  +++ ++  + PD  +L++ L A     +   G ++H  A++ GL   
Sbjct: 139 SGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRS 198

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN ++++Y                                K G +D A  VF+ M D
Sbjct: 199 TFVANALIAMY-------------------------------AKCGILDSAMRVFELMHD 227

Query: 152 -RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
            RD+  +N+MI+GC +NG     + LFR M +  +  ++Y+   VL VC +   L  GR+
Sbjct: 228 GRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRE 287

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH+ + KSG    +   NAL+ MY  CG V  A +VF E      D+IS+N M+      
Sbjct: 288 LHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEK--DYISWNSMLSCYVQN 344

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGFEAYTS 324
           G   EA+    +ML    +P     VS+ SA     +G+     +VHA A+K   ++ T 
Sbjct: 345 GLYAEAIEFISEMLRGGFQPDHACIVSLSSAV--GHLGWLLNGKEVHAYAIKQRLDSDTQ 402

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  + MY  C  I+ +  +F R++ KD +SW T+I+ YAQ +    A+  + E Q  G
Sbjct: 403 VGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEG 462

Query: 385 IRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I+ D    GS+L A SG   I + + +H +   NG++ ++ V N +I  Y +   +  + 
Sbjct: 463 IKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRIIDIYGECGEVYHSL 521

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  +  ++I+TW ++IN +  +G   + L  F+E+  ++++PD   L   L +   +S
Sbjct: 522 KMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLS 581

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           SL  GK++HG++++ N   + ++ ++++ +Y+ CG L  +L+VFN +  KD + W A+I+
Sbjct: 582 SLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMIN 641

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A   HG GK+A+  FK M   G + PD  +F A+L ACSH+ LV++G    D M++ Y  
Sbjct: 642 ATGMHGHGKQAIDLFKRMLQTG-VTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRL 700

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P ++H +C++DLLGR+G  +EA   I S  ++ +S  W +L  AC  H N  L  + A 
Sbjct: 701 EPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAAN 760

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE E D P  YVL+SN++A  G W  A  +R  +   G+ K P CSWI
Sbjct: 761 RLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWI 810



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 199/399 (49%), Gaps = 19/399 (4%)

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           SL    GF     +   L+ MY  CG V DA  +F+          S+N ++    S G 
Sbjct: 89  SLEGDDGF-----LATKLLFMYGKCGRVADARLLFDGMSSRTV--FSWNALIGAYLSSGS 141

Query: 272 VEEALIRFRDMLVAS---LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSV 325
             EAL  +R M +++   + P   T  SV+ A       R G +VH  A+K G +  T V
Sbjct: 142 ACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFV 201

Query: 326 SNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           +NA I MY+ CG +D A  +F  + + +D+ SWN+MIS   Q  +   A+  +  MQ   
Sbjct: 202 ANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAV 261

Query: 385 IRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +  + +T   +L     +  + +   +HA +  +G   NIQ  NAL+  Y K  R+  A 
Sbjct: 262 LSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSAL 320

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  +  ++ I+WN++++ ++ NG   + ++  SE+L    +PD   +    S+   + 
Sbjct: 321 RVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L +GK++H Y +K  L S   +GN ++ +Y KC  ++ S  VF+ M  KD ISW  +I+
Sbjct: 381 WLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIIT 440

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            YAQ     EA+  F+  Q  G IK D     ++L ACS
Sbjct: 441 CYAQSSRHIEALEIFREAQKEG-IKVDPMMIGSILEACS 478



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 203/451 (45%), Gaps = 58/451 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPD---IYSLSTTLAACANLRNAAFGNQLHA 81
           N  L+   ++G Y +A+  F+        +PD   I SLS+ +     L N   G ++HA
Sbjct: 335 NSMLSCYVQNGLYAEAIE-FISEMLRGGFQPDHACIVSLSSAVGHLGWLLN---GKEVHA 390

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           YA++  L +   V NT++ +Y   R +     VF  ++  D  SWTT ++   +      
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIE 450

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A E+                               FRE  K  ++ D     S+L  C +
Sbjct: 451 ALEI-------------------------------FREAQKEGIKVDPMMIGSILEAC-S 478

Query: 202 GL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           GL  +   +QLH    ++G   LV V N +I +Y  CG V  + K+FE  +    D +++
Sbjct: 479 GLETILLAKQLHCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFETVEQK--DIVTW 535

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             M++  A+ G + EAL+ F +M    ++P  +  VS++ A         G +VH   ++
Sbjct: 536 TSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIR 595

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
             F    ++ ++ + MYS CG +  A  +F  ++ KD+V W  MI+       G+ AI  
Sbjct: 596 RNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDL 655

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN------ALISA 430
           +  M   G+ PD  +F +LL +    ++V       +++ +++  ++         ++  
Sbjct: 656 FKRMLQTGVTPDHVSFLALLYACSHSKLVN--EGKCYLDMMMSTYRLEPWQEHYACVVDL 713

Query: 431 YAKNERIKQAYQIFHNM--SPRNIITWNTLI 459
             ++ + ++AY+   +M   P++++ W +L+
Sbjct: 714 LGRSGQTEEAYEFIKSMPLKPKSVV-WCSLL 743



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 16/284 (5%)

Query: 375 LAYLEMQSVGIRPDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITNIQ--VSNALIS 429
           L  L  Q+ G  P +  +G    L+A+   +     +HA     G +      ++  L+ 
Sbjct: 44  LRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLF 103

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPD 486
            Y K  R+  A  +F  MS R + +WN LI  +L +G   + L  +  + +S    + PD
Sbjct: 104 MYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPD 163

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             TL+  L +       R G ++HG  +K+ L     + NA+I +YAKCG LD ++RVF 
Sbjct: 164 GCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFE 223

Query: 547 MMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           +M + +D  SWN++IS   Q+G   +A+  F+ MQ    +  +  T   VL  C+    +
Sbjct: 224 LMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR-AVLSMNSYTTVGVLQVCTELAQL 282

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSC--MLDLLGRAGYLDEAERV 647
           + G  +  +++       +E ++ C  +L +  + G +D A RV
Sbjct: 283 NLGRELHAALLKS----GSEVNIQCNALLVMYTKCGRVDSALRV 322


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 229/711 (32%), Positives = 375/711 (52%), Gaps = 44/711 (6%)

Query: 28  LANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           L   SR G  Q+A  LF+ I H   ++   I+S  + L   A L +  FG QLH   ++ 
Sbjct: 69  LFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS--SVLKVSATLCDELFGRQLHCQCIKF 126

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G      V  +++  Y    +       F + +N                        VF
Sbjct: 127 GFLDDVSVGTSLVDTYMKGSN-------FKDGRN------------------------VF 155

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLE 205
           D+M +R++  +  +I+G   N   +  + LF  M     + ++++FA+ L V  + G+  
Sbjct: 156 DEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGG 215

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G Q+H++V K+G    + V N+LI +Y  CGNV  A  +F++ +  V   +++N M+ G
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE--VKSVVTWNSMISG 273

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
            A+ G   EAL  F  M +  +R SE +F S++  C      R   Q+H   +K GF   
Sbjct: 274 YAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFD 333

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
            ++  A +  YS C  + +A  +F       ++VSW  MIS + Q +    A+  + EM+
Sbjct: 334 QNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMK 393

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             G+RP+EFT+  +L +   I   E +HA V       +  V  AL+ AY K  ++ +A 
Sbjct: 394 RKGVRPNEFTYSVILTALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAA 452

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA-RI 500
           ++F  +  ++I+ W+ ++ G+   G     ++ FSEL    ++P+E+T S  L+ CA   
Sbjct: 453 KVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATT 512

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +S+  GKQ HG+ +K+ L S + + +A++T+YAK G ++ +  VF    EKD +SWN++I
Sbjct: 513 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMI 572

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S YAQHG+  +A+  FK M+   ++K D  TF  V +AC+HAGLV++G + FD MV D  
Sbjct: 573 SGYAQHGQAMKALDVFKEMKK-RKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 631

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P ++H SCM+DL  RAG L++A +VI++    A S  W  + +AC  H    LGR+ A
Sbjct: 632 IAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAA 691

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             ++    +  + YVLLSN+YA +G W+E A +R+L+    V K+PG SWI
Sbjct: 692 EKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 170/593 (28%), Positives = 288/593 (48%), Gaps = 27/593 (4%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-- 198
           YA  +FDK PDRD   Y +++ G + +G       LF  +  L +  D   F+SVL V  
Sbjct: 49  YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108

Query: 199 --CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
             CD     FGRQLH    K GF   VSV  +L+  Y    N  D   VF+E K    + 
Sbjct: 109 TLCDE---LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER--NV 163

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +++  ++ G A     EE L  F  M     +P+  TF + +       V   G QVH  
Sbjct: 164 VTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 223

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K+G +    VSN+ I +Y  CG + +A ++F + + K +V+WN+MIS YA   L   A
Sbjct: 224 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 283

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M+   +R  E +F S++   A+   +   E +H  V   G + +  +  AL+ A
Sbjct: 284 LGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVA 343

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
           Y+K   +  A ++F       N+++W  +I+GFL N    + +  FSE+    +RP+E+T
Sbjct: 344 YSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFT 403

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            SV L++   IS      ++H  V+K N     ++G A++  Y K G +D + +VF+ + 
Sbjct: 404 YSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGID 459

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            KD ++W+A+++ YAQ GE + A+  F  +   G +KP++ TF+++L+ C+         
Sbjct: 460 NKDIVAWSAMLAGYAQAGETEAAIKIFSELTK-GGVKPNEFTFSSILNVCAATTASMGQG 518

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           + F           +    S +L +  + G+++ AE V   Q  +    +W ++ S  A 
Sbjct: 519 KQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMISGYAQ 577

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGLWEEAANIRELLKR 719
           HG       +   + +R+    SV  +   ++AA   AGL EE     +++ R
Sbjct: 578 HGQAMKALDVFKEMKKRKVKMDSVTFI--GVFAACTHAGLVEEGEKYFDIMVR 628


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/686 (31%), Positives = 372/686 (54%), Gaps = 47/686 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++    L AC  + +   G ++H   ++ G  +   VAN+++S+Y    D++  +++F
Sbjct: 9   DSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLF 68

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGI 174
                                          D+M +R D+  +N++I+  + NG     +
Sbjct: 69  -------------------------------DRMNERNDVVSWNSIISAYSLNGQCMEAL 97

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           GLFREM K  V  + Y+  + L  C D+   + G ++H+ + KS     V V NAL+ M+
Sbjct: 98  GLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMH 157

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G +  A ++F+E      D+I++N M+ G    G   EAL  F  +  A+L+P E++
Sbjct: 158 VRFGKMSYAARIFDELDEK--DNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVS 215

Query: 294 FVSVMSACLCPRVGY-----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            +S+++A    R+GY     ++HA AMK+  ++   + N  I MYS C  +  A ++F +
Sbjct: 216 LISILAAS--GRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDK 273

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS-LLASSGF--IEMV 405
           +  KD++SW T+I+ YAQ N    A+    ++Q+ G+  D    GS LLA SG   +   
Sbjct: 274 MINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHA 333

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +H +    G+ +++ + N +I  YA    I  A ++F ++  +++++W ++I+ ++ N
Sbjct: 334 KEVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHN 392

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   + L  F  +  + + PD  TL   LS+ A +S+L  GK+IHG++ +   + + S  
Sbjct: 393 GLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTV 452

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N+++ +YA CG L+ + +VF     K  + W  +I+AY  HG GK AV  F  M+D  ++
Sbjct: 453 NSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMED-QKL 511

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            PD  TF A+L ACSH+GL+++G R+ ++M   Y   P  +H +C++DLLGRA +L+EA 
Sbjct: 512 IPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAY 571

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             + S  I+  ++ W A   AC  H N +LG I A  LL+ + D P  YVL+SN++AA+G
Sbjct: 572 HFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASG 631

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++   +R  +K  G+ K PGCSWI
Sbjct: 632 RWKDVEEVRMRMKGGGLKKNPGCSWI 657



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/555 (28%), Positives = 286/555 (51%), Gaps = 29/555 (5%)

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           M  L V  D+++F  VL  C  G++E    G ++H L+ K G+  +V V N+L++MY  C
Sbjct: 1   MRVLGVPFDSFTFPCVLKAC--GVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKC 58

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
            +++ A K+F+       D +S+N ++   +  G+  EAL  FR+M  A +  +  T V+
Sbjct: 59  NDILGARKLFDRMNERN-DVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVA 117

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            + AC      ++G ++HA  +KS       V+NA + M+   GK+  A  IF  L EKD
Sbjct: 118 ALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKD 177

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHA 410
            ++WN+MI+ + Q  L   A+  +  +Q   ++PDE +  S+LA+SG +  +   + IHA
Sbjct: 178 NITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +   N + +N+++ N LI  Y+K   +  A  +F  M  +++I+W T+I  +  N    +
Sbjct: 238 YAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTE 297

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+   ++    +  D   +   L +C+ +  L H K++HGY LK  L S + + N +I 
Sbjct: 298 ALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNMIID 356

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YA CG+++ + R+F  +  KD +SW ++IS Y  +G   EA+  F  M++   ++PD  
Sbjct: 357 VYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETS-VEPDSI 415

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           T  ++LSA +    ++ G  I    +   GF+     ++ ++D+    G L+ A +V   
Sbjct: 416 TLVSILSAAASLSALNKGKEI-HGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF-- 472

Query: 651 QHIQARSDN---WWALFSACAAHGNLRLGRIIAGL--LLEREQDKPSVYVLLSNIYAA-- 703
             I  RS +   W  + +A   HG    G+    L  ++E ++  P     L+ +YA   
Sbjct: 473 --ICTRSKSLVLWTTMINAYGMHGR---GKAAVELFSIMEDQKLIPDHITFLALLYACSH 527

Query: 704 AGLWEEAANIRELLK 718
           +GL  E   + E +K
Sbjct: 528 SGLINEGKRLLETMK 542



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 217/492 (44%), Gaps = 42/492 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S +G   +AL LF ++  +  +  + Y+L   L AC +      G ++HA  L
Sbjct: 81  NSIISAYSLNGQCMEALGLFREMQKA-GVGANTYTLVAALQACEDSSFKKLGMEIHAAIL 139

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++      +VAN +++++     +    R+F E+   D  +W                  
Sbjct: 140 KSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITW------------------ 181

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                        N+MI G T+NG  +  +  F  +   +++ D  S  S+L+     G 
Sbjct: 182 -------------NSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGY 228

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+++H+   K+     + + N LI MY  C  V  A  VF++      D IS+  ++
Sbjct: 229 LLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK--DLISWTTVI 286

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
              A      EAL   R +    +    +   S + AC    C     +VH   +K G  
Sbjct: 287 AAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS 346

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + N  I +Y+ CG I+ A  +F  ++ KD+VSW +MIS Y    L   A+  +  M
Sbjct: 347 DLM-MQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLM 405

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   + PD  T  S+L+++  +  +   + IH F+F  G +      N+L+  YA    +
Sbjct: 406 KETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSL 465

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + AY++F     ++++ W T+IN + ++G     ++ FS +   +L PD  T    L +C
Sbjct: 466 ENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYAC 525

Query: 498 ARISSLRHGKQI 509
           +    +  GK++
Sbjct: 526 SHSGLINEGKRL 537



 Score = 43.1 bits (100), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G   +AL +F  +  +  ++PD  +L + L+A A+L     G ++H +  R G      
Sbjct: 392 NGLANEALGVFYLMKET-SVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGS 450

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
             N+++ +Y     L +  +VF   ++  +  WTT ++A    G    A E+F  M D+ 
Sbjct: 451 TVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQK 510

Query: 154 L-P---VYNAMITGCTENGYEDIGIGLFREM 180
           L P    + A++  C+ +G  + G  L   M
Sbjct: 511 LIPDHITFLALLYACSHSGLINEGKRLLETM 541


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 228/706 (32%), Positives = 381/706 (53%), Gaps = 64/706 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSV 111
           +KPD Y+    L A A+L++   G Q+HA+  + G       VANT+++LY+   D  +V
Sbjct: 93  IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYE 170
            +VF                               D++ +R+   +N++I+  C+   +E
Sbjct: 153 YKVF-------------------------------DRISERNQVSWNSLISSLCSFEKWE 181

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-----AGLLEFGRQLHSLVTKSGFSCLVSV 225
            + +  FR M   +V   +++  SV++ C       GL+  G+Q+H+   + G      +
Sbjct: 182 -MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-ELNSFI 238

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+ MY   G +  +  +     G   D +++N ++  L    ++ EAL   R+M++ 
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
            + P E T  SV+ AC      R G ++HA A+K+G  +  + V +A + MY +C ++  
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS-- 398
              +F  + ++ I  WN MI+ Y+Q    + A+L ++ M+ S G+  +  T   ++ +  
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG     E IH FV   G+  +  V N L+  Y++  +I  A +IF  M  R+++TWNT
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476

Query: 458 LINGFLLNGFPVQGLQHFSELLMSE-----------LRPDEYTLSVALSSCARISSLRHG 506
           +I G++ +      L    ++   E           L+P+  TL   L SCA +S+L  G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IH Y +KNNL + +++G+A++ +YAKCG L  S +VF+ + +K+ I+WN +I AY  H
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G+EA+   + M   G +KP++ TF +V +ACSH+G+VD+G RIF  M  DYG  P+ D
Sbjct: 597 GNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           H +C++DLLGRAG + EA +++N       ++  W +L  A   H NL +G I A  L++
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +  S YVLL+NIY++AGLW++A  +R  +K  GV K+PGCSWI
Sbjct: 716 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 197/387 (50%), Gaps = 13/387 (3%)

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT-SVSN 327
           + EA++ + DM+V  ++P    F +++ A    +   +G Q+HA   K G+   + +V+N
Sbjct: 78  LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + +Y  CG       +F R+ E++ VSWN++IS+         A+ A+  M    + P
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197

Query: 388 DEFTFGSLLASSGFIEMVE------MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             FT  S++ +   + M E       +HA+    G + +  + N L++ Y K  ++  + 
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +  +   R+++TWNT+++    N   ++ L++  E+++  + PDE+T+S  L +C+ + 
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316

Query: 502 SLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            LR GK++H Y LKN  + + S +G+A++ +Y  C  +    RVF+ M ++    WNA+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y+Q+   KEA+  F  M++   +  +  T   V+ AC  +G       I   +V   G
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RG 435

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERV 647
                   + ++D+  R G +D A R+
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRI 462



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 142/269 (52%), Gaps = 9/269 (3%)

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-- 407
           Q +    W  ++ +  + NL R A+L Y++M  +GI+PD + F +LL +   ++ +E+  
Sbjct: 58  QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117

Query: 408 -IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            IHA V+  G  + ++ V+N L++ Y K       Y++F  +S RN ++WN+LI+     
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI---SSLRHGKQIHGYVLKNNLISKM 522
                 L+ F  +L   + P  +TL   +++C+ +     L  GKQ+H Y L+   ++  
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + N ++ +Y K G L  S  +      +D ++WN ++S+  Q+ +  EA+   + M   
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           G ++PD+ T ++VL ACSH  ++  G  +
Sbjct: 297 G-VEPDEFTISSVLPACSHLEMLRTGKEL 324



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 139/280 (49%), Gaps = 27/280 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  +A  S++ H ++AL LF+ +  S  L  +  +++  + AC  +R+ AF  +  +H +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--VRSGAFSRKEAIHGF 430

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            ++ GL     V NT++ +Y     +    R+F ++++ D+ +W T ++      H + A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA- 201
             +  KM + +  V                         ++ ++ ++ +  ++L  C A 
Sbjct: 491 LLLLHKMQNLERKVSKG--------------------ASRVSLKPNSITLMTILPSCAAL 530

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L  G+++H+   K+  +  V+V +AL+ MY  CG +  + KVF++      + I++NV
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK--NVITWNV 588

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           ++      G  +EA+   R M+V  ++P+E+TF+SV +AC
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/610 (35%), Positives = 344/610 (56%), Gaps = 13/610 (2%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           LS   + G + +A  VF KMP+RD+  +N M+ G  + G+ +  + L+  M    +R D 
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197

Query: 190 YSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           Y+F  VL  C  G+ ++  GR++H+ V + GF   V V+NAL+TMY  CG++V A KVF+
Sbjct: 198 YTFPCVLRTC-GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV 306
                V D IS+N M+ G       E  L  F  ML   ++P+ +T  SV  A  +   V
Sbjct: 257 GMA--VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 307 GY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           G+  ++H  A+K GF    +  N+ I MY+S G++ +A  IF+R++ KD +SW  MIS Y
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNI 421
            +      A+  Y  M+   + PD+ T  S LA+    G +++   +H      G I  +
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+NAL+  YAK++ I +A ++F  M+ +++++W+++I GF  N    + L +F  +L  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-G 493

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++P+  T   ALS+CA   +LR GK+IH YVL+  + S+  + NA++ LY KCG    +
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              F++  EKD +SWN ++S +  HG G  A+S F  M ++G   PD+ TF A+L ACS 
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACSR 612

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+V  G  +F  M   +  +P   H +CM+DLL R G L EA  +IN   I+  +  W 
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL + C  H ++ LG + A ++LE E +  + +VLL ++Y  AG W + A +R+ ++  G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 722 VIKQPGCSWI 731
           + +  GCSW+
Sbjct: 733 LEQDNGCSWV 742



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 267/556 (48%), Gaps = 46/556 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    + G  ++AL L+ ++  +  ++PD+Y+    L  C  + +   G ++H
Sbjct: 162 VFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYTFPCVLRTCGGIPDWRMGREVH 220

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR G      V N ++++Y    D+V+ ++VF  +   D  SW              
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW-------------- 266

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  EN   + G+ LF  M + +V+ +  +  SV +V  
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV-TVAS 308

Query: 201 AGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             L E  F +++H    K GF+  V+  N+LI MY + G + DA K+F   +    D +S
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME--TKDAMS 366

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +  M+ G    G  ++AL  +  M + ++ P ++T  S ++AC C     VG ++H  A 
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
             GF  Y  V+NA + MY+    ID+A  +F  + EKD+VSW++MI+ +   +    A L
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA-L 485

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            Y       ++P+  TF + L   A++G +   + IHA+V   GI +   V NAL+  Y 
Sbjct: 486 YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYV 545

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  +   A+  F   S +++++WN +++GF+ +G     L  F++++     PDE T   
Sbjct: 546 KCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVA 605

Query: 493 ALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
            L +C+R   +  G ++ H    K +++  +     M+ L ++ G L  +  + N M I+
Sbjct: 606 LLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIK 665

Query: 551 KDTISWNALISAYAQH 566
            D   W AL++    H
Sbjct: 666 PDAAVWGALLNGCRIH 681



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E  +V++   C   R    G +  A+A          + NA ++M    G+I  A  +
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI--- 402
           FA++ E+D+ SWN M+  Y +      A+  Y  M   G+RPD +TF  +L + G I   
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            M   +HA V   G    + V NAL++ YAK   I  A ++F  M+  + I+WN +I G 
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             N     GL+ F  +L +E++P+  T++    +   +S +   K++HG+ +K      +
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           +  N++I +Y   G +  + ++F+ M  KD +SW A+IS Y ++G   +A+  + A+ ++
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY-ALMEL 392

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             + PD  T  + L+AC+  G +D G ++ + +  + GFI      + +L++  ++ ++D
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 643 EAERVINSQ---------------------------------HIQARSDNWWALFSACAA 669
           +A  V                                     H++  S  + A  SACAA
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAA 511

Query: 670 HGNLRLGRIIAGLLL 684
            G LR G+ I   +L
Sbjct: 512 TGALRSGKEIHAYVL 526


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 219/649 (33%), Positives = 347/649 (53%), Gaps = 11/649 (1%)

Query: 91  YPHVANTILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           Y H A  +L    + ++L  +   VF      + +  T  +S   + G VD A  VF+ +
Sbjct: 36  YEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 95

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
             +   +Y+ M+ G  +    D  +  F  M   DV    Y+F  +L VC D   L  G+
Sbjct: 96  DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           ++H L+ KSGFS  +  +  L  MY  C  V +A KVF+       D +S+N ++ G + 
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER--DLVSWNTIVAGYSQ 213

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G    AL   + M   +L+PS +T VSV+ A    R   VG ++H  AM+SGF++  ++
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S A + MY+ CG ++ A  +F  + E+++VSWN+MI  Y Q    + A+L + +M   G+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333

Query: 386 RPDEFT-FGSLLASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P + +  G+L A +  G +E    IH      G+  N+ V N+LIS Y K + +  A  
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +  R +++WN +I GF  NG P+  L +FS++    ++PD +T    +++ A +S 
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             H K IHG V+++ L   + +  A++ +YAKCG +  +  +F+MM E+   +WNA+I  
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y  HG GK A+  F+ MQ  G IKP+  TF +V+SACSH+GLV+ G + F  M  +Y   
Sbjct: 514 YGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
            + DH   M+DLLGRAG L+EA   I    ++   + + A+  AC  H N+      A  
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 632

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L E   D    +VLL+NIY AA +WE+   +R  + R G+ K PGCS +
Sbjct: 633 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/589 (24%), Positives = 275/589 (46%), Gaps = 52/589 (8%)

Query: 23  KLNI----SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           KLN+     L   ++      AL  FV++     ++P +Y+ +  L  C +      G +
Sbjct: 98  KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H   +++G          + ++Y   R +   ++VF  +   D+ SW T          
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT---------- 206

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                                ++ G ++NG   + + + + M + +++    +  SVL  
Sbjct: 207 ---------------------IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             A  L+  G+++H    +SGF  LV++  AL+ MY  CG++  A ++F+       + +
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER--NVV 303

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           S+N M+D        +EA++ F+ ML   ++P++++ +  + AC        G  +H  +
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           ++ G +   SV N+ I+MY  C ++D A  +F +LQ + +VSWN MI  +AQ      A+
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423

Query: 375 LAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             + +M+S  ++PD FT+ S+   +A        + IH  V  + +  N+ V+ AL+  Y
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   I  A  IF  MS R++ TWN +I+G+  +GF    L+ F E+    ++P+  T  
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLRVFNMMI 549
             +S+C+    +  G +   Y++K N   ++S+ +  AM+ L  + G L+ +      M 
Sbjct: 544 SVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602

Query: 550 EKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            K  ++ + A++ A   H   K      KA + +  + PD   +  +L+
Sbjct: 603 VKPAVNVYGAMLGACQIH---KNVNFAEKAAERLFELNPDDGGYHVLLA 648



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 229/494 (46%), Gaps = 49/494 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  S++G  + AL + V+      LKP   ++ + L A + LR  + G ++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YA+R+G  +  +++  ++ +Y     L + +++F                         
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF------------------------- 294

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                 D M +R++  +N+MI    +N      + +F++M    V+  + S    L  C 
Sbjct: 295 ------DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D G LE GR +H L  + G    VSVVN+LI+MY  C  V  A  +F + +      +S+
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL--VSW 406

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
           N M+ G A  GR  +AL  F  M   +++P   T+VSV++A     + +    +H   M+
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S  +    V+ A + MY+ CG I  A +IF  + E+ + +WN MI  Y     G++A+  
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS----NALISAYA 432
           + EMQ   I+P+  TF S++++     +VE      ++     +I++S     A++    
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYT 489
           +  R+ +A+     M  +  +     + G +L    +    +F+E     + EL PD+  
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVN----VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642

Query: 490 LSVALSSCARISSL 503
             V L++  R +S+
Sbjct: 643 YHVLLANIYRAASM 656


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/724 (32%), Positives = 376/724 (51%), Gaps = 45/724 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+EL     I+L  + +  HY++AL  F     +  ++ +  +    + AC ++R+  +G
Sbjct: 119 SRELSTNSYINL--MCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYG 176

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++H + L++  +    + N IL++Y                                K 
Sbjct: 177 KKIHDHILKSNCQPDLVLQNHILNMYG-------------------------------KC 205

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +  A + FD M  R++  +  MI+G ++NG E+  I ++ +M +     D  +F S++
Sbjct: 206 GSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSII 265

Query: 197 -SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            + C AG ++ GRQLH  V KSG+   +   NALI+MY   G +V A  VF        D
Sbjct: 266 KACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMIS--TKD 323

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC---LCPRVGYQVH 311
            IS+  M+ G   +G   EAL  FRDM      +P+E  F SV SAC   L P  G Q+H
Sbjct: 324 LISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIH 383

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               K G         +   MY+  G +  A   F +++  D+VSWN +I+ ++      
Sbjct: 384 GMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVN 443

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALI 428
            AI  + +M   G+ PD  TF SLL + G    I     IH+++   G+     V N+L+
Sbjct: 444 EAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLL 503

Query: 429 SAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           + Y K   +  A+ +F ++S   N+++WN +++  L +    +  + F  +L SE +PD 
Sbjct: 504 TMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDN 563

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T++  L +CA ++SL  G Q+H + +K+ L+  +S+ N +I +YAKCG L  +  VF  
Sbjct: 564 ITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGS 623

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
               D +SW++LI  YAQ G G EA++ F+ M+++G ++P++ T+  VLSACSH GLV++
Sbjct: 624 TQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLG-VQPNEVTYLGVLSACSHIGLVEE 682

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   +++M  + G  P  +H+SCM+DLL RAG L EAE  I           W  L ++C
Sbjct: 683 GWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASC 742

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGN+ +    A  +L+ +    +  VLLSNI+A+ G W+E A +R L+K+ GV K PG
Sbjct: 743 KTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPG 802

Query: 728 CSWI 731
            SWI
Sbjct: 803 QSWI 806


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 225/736 (30%), Positives = 380/736 (51%), Gaps = 50/736 (6%)

Query: 11  AGNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AG+++T+  L        ++  N  ++   + G +++++ L +++ S   +  D  +L+ 
Sbjct: 98  AGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEM-SRRGVALDRTTLAV 156

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            L +C  L + A G Q+HA A++ GL+      + ++ +Y   R L              
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSL-------------- 202

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                            D A   F  M +R+   + A I GC +N     G+ LF +M +
Sbjct: 203 -----------------DDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQR 245

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
           L +     ++AS    C A   L   RQLH+   K+ FS    V  A++ +Y   GN+VD
Sbjct: 246 LGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVD 305

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A + F     +  +  + N MM GL   G   EA+  F+ M  + +    ++   V SAC
Sbjct: 306 ARRAFIGLPHHNVE--TCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSAC 363

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              +    G QVH  A+KSGF+    V NA + +Y  C  + EA ++F  ++++D VSWN
Sbjct: 364 AEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWN 423

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFIN 415
            +I+   Q       I    EM   G+ PD+FT+GS+L +   ++ +E   ++H     +
Sbjct: 424 AIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKS 483

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+  +  VS+ ++  Y K   I +A ++   +  + +++WN++I+GF L     +  + F
Sbjct: 484 GLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFF 543

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
           SE+L   ++PD +T +  L +CA ++++  GKQIHG ++K  ++    + + ++ +YAKC
Sbjct: 544 SEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC 603

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  SL +F    + D +SWNA+I  YA HG+G EA+  F+ MQ    + P+ ATF AV
Sbjct: 604 GNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRA-NVVPNHATFVAV 662

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L ACSH GL+DDG + F  M + Y  +P  +H +CM+D+LGR+    EA   I S  I+A
Sbjct: 663 LRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEA 722

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            +  W  L S C    ++ +    A  +L  + D  SVY+LLSN+YA +G W + +  R 
Sbjct: 723 DAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRR 782

Query: 716 LLKRTGVIKQPGCSWI 731
           L+++  + K+PGCSWI
Sbjct: 783 LMRQGRLRKEPGCSWI 798



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 158/620 (25%), Positives = 288/620 (46%), Gaps = 24/620 (3%)

Query: 67  CANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           CA+   +A   G   HA  L +G      V+N +L +Y           VF  + + D  
Sbjct: 27  CASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTV 86

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SW T L+A    G  D A  +F  MPD D+  +N +I+G  ++G     +GL  EM +  
Sbjct: 87  SWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRG 146

Query: 185 VRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           V  D  + A +L  C  GL  L  G Q+H+L  K+G    V   +AL+ MY  C ++ DA
Sbjct: 147 VALDRTTLAVLLKSC-GGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            + F        + +S+   + G     +    +  F  M    L  S+  + S   +C 
Sbjct: 206 LRFFHGMGER--NSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCA 263

Query: 303 ---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
              C     Q+HA A+K+ F +   V  A + +Y+  G + +A   F  L   ++ + N 
Sbjct: 264 AMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNA 323

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHAFVFIN 415
           M+    +  LG  A+  +  M   G+  D  +   + ++     G+ + ++ +H     +
Sbjct: 324 MMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQ-VHCLAVKS 382

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G   ++ V NA++  Y K + + +AY +F  M  R+ ++WN +I     N      + H 
Sbjct: 383 GFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHL 442

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
           +E+L S + PD++T    L +CA + SL +G  +HG  +K+ L     + + ++ +Y KC
Sbjct: 443 NEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKC 502

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G +  + ++ + +  ++ +SWN++IS ++   + +EA   F  M D+G +KPD  T+  V
Sbjct: 503 GAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMG-VKPDHFTYATV 561

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L  C++   ++ G +I   ++     +  E   S ++D+  + G + ++  +      +A
Sbjct: 562 LDTCANLATIELGKQIHGQIIKQE-MLGDEYISSTLVDMYAKCGNMPDSLLMFE----KA 616

Query: 656 RSDN---WWALFSACAAHGN 672
           R  +   W A+    A HG 
Sbjct: 617 RKLDFVSWNAMICGYALHGQ 636



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + A  S+L  G+  H  +L +  +    + N ++ +YA+CG    +  VF+ M  +DT
Sbjct: 26  LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA-CSHA 602
           +SWN +++AY   G+   A S F  M D     PD  ++  ++S  C H 
Sbjct: 86  VSWNTMLTAYVHAGDTDTAASLFGTMPD-----PDVVSWNTLISGYCQHG 130


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/610 (35%), Positives = 344/610 (56%), Gaps = 13/610 (2%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           LS   + G + +A  VF KMP+RD+  +N M+ G  + G+ +  + L+  M    +R D 
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197

Query: 190 YSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           Y+F  VL  C  G+ ++  GR++H+ V + GF   V V+NAL+TMY  CG++V A KVF+
Sbjct: 198 YTFPCVLRTC-GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV 306
                V D IS+N M+ G       E  L  F  ML   ++P+ +T  SV  A  +   V
Sbjct: 257 GMA--VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 307 GY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           G+  ++H  A+K GF    +  N+ I MY+S G++ +A  IF+R++ KD +SW  MIS Y
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNI 421
            +      A+  Y  M+   + PD+ T  S LA+    G +++   +H      G I  +
Sbjct: 375 EKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+NAL+  YAK++ I +A ++F  M+ +++++W+++I GF  N    + L +F  +L  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYML-G 493

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++P+  T   ALS+CA   +LR GK+IH YVL+  + S+  + NA++ LY KCG    +
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              F++  EKD +SWN ++S +  HG G  A+S F  M ++G   PD+ TF A+L ACS 
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE-HPDEVTFVALLCACSR 612

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+V  G  +F  M   +  +P   H +CM+DLL R G L EA  +IN   I+  +  W 
Sbjct: 613 AGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWG 672

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL + C  H ++ LG + A ++LE E +  + +VLL ++Y  AG W + A +R+ ++  G
Sbjct: 673 ALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKG 732

Query: 722 VIKQPGCSWI 731
           + +  GCSW+
Sbjct: 733 LEQDNGCSWV 742



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 267/556 (48%), Gaps = 46/556 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    + G  ++AL L+ ++  +  ++PD+Y+    L  C  + +   G ++H
Sbjct: 162 VFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYTFPCVLRTCGGIPDWRMGREVH 220

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR G      V N ++++Y    D+V+ ++VF  +   D  SW              
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISW-------------- 266

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  EN   + G+ LF  M + +V+ +  +  SV +V  
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV-TVAS 308

Query: 201 AGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             L E  F +++H    K GF+  V+  N+LI MY + G + DA K+F   +    D +S
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME--TKDAMS 366

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +  M+ G    G  ++AL  +  M + ++ P ++T  S ++AC C     VG ++H  A 
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
             GF  Y  V+NA + MY+    ID+A  +F  + EKD+VSW++MI+ +   +    A L
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEA-L 485

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            Y       ++P+  TF + L   A++G +   + IHA+V   GI +   V NAL+  Y 
Sbjct: 486 YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYV 545

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  +   A+  F   S +++++WN +++GF+ +G     L  F++++     PDE T   
Sbjct: 546 KCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVA 605

Query: 493 ALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
            L +C+R   +  G ++ H    K +++  +     M+ L ++ G L  +  + N M I+
Sbjct: 606 LLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIK 665

Query: 551 KDTISWNALISAYAQH 566
            D   W AL++    H
Sbjct: 666 PDAAVWGALLNGCRIH 681



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E  +V++   C   R    G +  A+A          + NA ++M    G+I  A  +
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI--- 402
           FA++ E+D+ SWN M+  Y +      A+  Y  M   G+RPD +TF  +L + G I   
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            M   +HA V   G    + V NAL++ YAK   I  A ++F  M+  + I+WN +I G 
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGH 273

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             N     GL+ F  +L +E++P+  T++    +   +S +   K++HG+ +K      +
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           +  N++I +Y   G +  + ++F+ M  KD +SW A+IS Y ++G   +A+  + A+ ++
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY-ALMEL 392

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             + PD  T  + L+AC+  G +D G ++ + +  + GFI      + +L++  ++ ++D
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 643 EAERVINSQ---------------------------------HIQARSDNWWALFSACAA 669
           +A  V                                     H++  S  + A  SACAA
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAA 511

Query: 670 HGNLRLGRIIAGLLL 684
            G LR G+ I   +L
Sbjct: 512 TGALRSGKEIHAYVL 526


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 228/707 (32%), Positives = 382/707 (54%), Gaps = 66/707 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSV 111
           +KPD ++    L A A+L++   G Q+HA+  + G       VANT+++LY+   D  +V
Sbjct: 89  IKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 148

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYE 170
            +VF                               D++ +R+   +N++I+  C+   +E
Sbjct: 149 YKVF-------------------------------DRISERNQVSWNSLISSLCSFEKWE 177

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-----AGLLEFGRQLHSLVTKSGFSCLVSV 225
            + +  FR M   DV   +++  SV   C       GLL  G+Q+H+   + G      +
Sbjct: 178 -MALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLL-MGKQVHAYGLRKG-ELNSFI 234

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+ MY   G +  +  +    +G   D +++N ++  L    +  EAL   R+M++ 
Sbjct: 235 INTLVAMYGKMGKLASSKVLLGSFEGR--DLVTWNTVLSSLCQNEQFLEALEYLREMVLE 292

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
            + P   T  SV+ AC      R G ++HA A+K+G  +  + V +A + MY +C ++  
Sbjct: 293 GVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 352

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS-- 398
            C +F  + ++ I  WN MI+ YAQ      A+L ++EM+ S G+  +  T   ++ +  
Sbjct: 353 GCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACV 412

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG     E IH FV   G+  +  V NAL+  Y++  +I  A +IF  M  R+++TWNT
Sbjct: 413 RSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNT 472

Query: 458 LINGFLLNGFPVQGLQHFSELLMSE-----------LRPDEYTLSVALSSCARISSLRHG 506
           +I G++ +      L    ++ + E           L+P+  TL   L SCA +S+L  G
Sbjct: 473 IITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKG 532

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IH Y +KNNL + +++G+A++ +YAKCG L  S +VF+ +  ++ I+WN ++ AY  H
Sbjct: 533 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMH 592

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G  ++A+   + M   G +KP++ TF +V +ACSH+G+V++G +IF +M  DYG  P+ D
Sbjct: 593 GNSQDAIDMLRMMMVQG-VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSD 651

Query: 627 HLSCMLDLLGRAGYLDEAERVIN--SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
           H +C++DLLGRAG + EA ++IN   ++   ++  W +L  AC  H NL +G I A  L+
Sbjct: 652 HYACVVDLLGRAGRVKEAYQLINLIPRNFD-KAGAWSSLLGACRIHNNLEIGEIAAQNLI 710

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + E +  S YVLL+NIY++AGLW +A  +R  +K  GV K+PGCSWI
Sbjct: 711 QLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWI 757



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 254/518 (49%), Gaps = 30/518 (5%)

Query: 179 EMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSC-LVSVVNALITMYFNC 236
           +M  L ++ DN++F ++L +V D   ++ G+Q+H+ V K G+    V+V N L+ +Y  C
Sbjct: 83  DMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 142

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G+     KVF+       + +S+N ++  L S  + E AL  FR ML   + PS  T VS
Sbjct: 143 GDFGAVYKVFDRISER--NQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVS 200

Query: 297 VMSAC---LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           V  AC     P    +G QVHA  ++ G E  + + N  + MY   GK+  + ++    +
Sbjct: 201 VALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFE 259

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--- 407
            +D+V+WNT++S+  Q      A+    EM   G+ PD FT  S+L +   +EM+     
Sbjct: 260 GRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKE 319

Query: 408 IHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           +HA+   NG +  N  V +AL+  Y   +++    ++F  M  R I  WN +I G+  N 
Sbjct: 320 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNE 379

Query: 467 FPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           +  + L  F E+  S  L  +  T++  + +C R  +    + IHG+V+K  L     + 
Sbjct: 380 YDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQ 439

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR- 584
           NA++ +Y++ G +D + R+F  M ++D ++WN +I+ Y      ++A+     MQ + R 
Sbjct: 440 NALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERK 499

Query: 585 ---------IKPDQATFTAVLSACSHAGLVDDGTRIFD-SMVNDYGFIPAEDHLSCMLDL 634
                    +KP+  T   +L +C+    +  G  I   ++ N+     A    S ++D+
Sbjct: 500 ASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG--SALVDM 557

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             + G L  + +V +   I+     W  +  A   HGN
Sbjct: 558 YAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN 594



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 199/387 (51%), Gaps = 13/387 (3%)

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT-SVSN 327
           + EA++ + DM+V  ++P    F +++ A    +   +G Q+HA   K G+   + +V+N
Sbjct: 74  LREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVAN 133

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + +Y  CG       +F R+ E++ VSWN++IS+         A+ A+  M    + P
Sbjct: 134 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEP 193

Query: 388 DEFTFGSL-LASSGF-----IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             FT  S+ LA S F     + M + +HA+    G + +  + N L++ Y K  ++  + 
Sbjct: 194 SSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-IINTLVAMYGKMGKLASSK 252

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +  +   R+++TWNT+++    N   ++ L++  E+++  + PD +T+S  L +C+ + 
Sbjct: 253 VLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLE 312

Query: 502 SLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            LR GK++H Y LKN  + + S +G+A++ +Y  C  +    RVF+ M ++    WNA+I
Sbjct: 313 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMI 372

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + YAQ+   +EA+  F  M++   +  +  T   V+ AC  +G       I   +V   G
Sbjct: 373 TGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-G 431

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERV 647
                   + ++D+  R G +D A+R+
Sbjct: 432 LDRDRFVQNALMDMYSRLGKIDIAKRI 458



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 222/463 (47%), Gaps = 59/463 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L++L ++  + +AL  +++      ++PD +++S+ L AC++L     G +LH
Sbjct: 263 LVTWNTVLSSLCQNEQFLEALE-YLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELH 321

Query: 81  AYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           AYAL+ G L     V + ++ +Y N + ++S                             
Sbjct: 322 AYALKNGSLDENSFVGSALVDMYCNCKQVLS----------------------------- 352

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSV 198
              C VFD M DR + ++NAMITG  +N Y++  + LF EM +   +  ++ + A V+  
Sbjct: 353 --GCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPA 410

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C  +G       +H  V K G      V NAL+ MY   G +  A ++F + +    D +
Sbjct: 411 CVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR--DLV 468

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLV-----------ASLRPSELTFVSVMSACLCPRV 306
           ++N ++ G     R E+AL+    M +            SL+P+ +T ++++ +C     
Sbjct: 469 TWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSA 528

Query: 307 ---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
              G ++HA A+K+      +V +A + MY+ CG +  +  +F ++  +++++WN ++  
Sbjct: 529 LAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMA 588

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIIT 419
           Y      + AI     M   G++P+E TF S+ A+   SG + E +++ +      G+  
Sbjct: 589 YGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEP 648

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNII---TWNTLI 459
           +      ++    +  R+K+AYQ+  N+ PRN      W++L+
Sbjct: 649 SSDHYACVVDLLGRAGRVKEAYQLI-NLIPRNFDKAGAWSSLL 690



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 140/262 (53%), Gaps = 9/262 (3%)

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVF 413
           W  ++ +  + NL R A+L Y++M  +GI+PD F F +LL +   ++ +++   IHA V+
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 414 INGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             G  + ++ V+N L++ Y K       Y++F  +S RN ++WN+LI+           L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 473 QHFSELLMSELRPDEYTL-SVAL--SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + F  +L  ++ P  +TL SVAL  S+      L  GKQ+H Y L+   ++   + N ++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII-NTLV 239

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y K G L  S  +      +D ++WN ++S+  Q+ +  EA+   + M   G ++PD 
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEG-VEPDG 298

Query: 590 ATFTAVLSACSHAGLVDDGTRI 611
            T ++VL ACSH  ++  G  +
Sbjct: 299 FTISSVLPACSHLEMLRTGKEL 320



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 101/200 (50%), Gaps = 7/200 (3%)

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W  L+   + +    + +  + ++++  ++PD +     L + A +  +  GKQIH +V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 515 KNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           K    +  +++ N ++ LY KCGD     +VF+ + E++ +SWN+LIS+     + + A+
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH---LSC 630
             F+ M D   ++P   T  +V  ACS+  + +    +    V+ YG    E +   ++ 
Sbjct: 181 EAFRCMLDED-VEPSSFTLVSVALACSNFPMPEG--LLMGKQVHAYGLRKGELNSFIINT 237

Query: 631 MLDLLGRAGYLDEAERVINS 650
           ++ + G+ G L  ++ ++ S
Sbjct: 238 LVAMYGKMGKLASSKVLLGS 257


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 231/713 (32%), Positives = 374/713 (52%), Gaps = 50/713 (7%)

Query: 31  LSRSGHYQDALHLFVQIH---SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + +  HY++AL  F   H   SS +L+P  Y     + AC N+R+  +G ++H + L++ 
Sbjct: 54  MCKQQHYREALDTF-NFHLKNSSIQLEPSTYV--NLILACTNVRSLKYGKRIHDHILKSN 110

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +    + N IL++Y     L   ++ F  +Q   V SWT                    
Sbjct: 111 CQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTI------------------- 151

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
                       MI+G ++NG E+  I ++ +M +     D  +F S++ + C AG ++ 
Sbjct: 152 ------------MISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDL 199

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLH  V KSG+   +   NALI+MY   G +  A  VF        D IS+  M+ G 
Sbjct: 200 GGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMIS--TKDLISWASMITGF 257

Query: 267 ASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAY 322
             +G   EAL  FRDM    + +P+E  F SV SAC   L P  G Q+     K G    
Sbjct: 258 TQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRN 317

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
                +   MY+  G +  A   F +++  D+VSWN +I+  A  ++   AI  + +M  
Sbjct: 318 VFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNE-AIYFFCQMIH 376

Query: 383 VGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           +G+ PD+ TF +LL + G    +     IH+++   G+     V N+L++ Y K   +  
Sbjct: 377 MGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHD 436

Query: 440 AYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           A+ +F ++S   N+++WN +++    +  P +  + F  +L SE +PD  T++  L +CA
Sbjct: 437 AFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCA 496

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + SL  G Q+H + +K+ L+  +S+ N +I +YAKCG L  +  VF+     D +SW++
Sbjct: 497 ELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSS 556

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LI  YAQ G G+EA++ F+ M+++G ++P++ T+  VLSACSH GLV++G  ++++M  +
Sbjct: 557 LIVGYAQFGLGQEALNLFRMMRNLG-VQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIE 615

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
            G  P  +H+SCM+DLL RAG L EAE  I           W  L ++C  HGN+ +   
Sbjct: 616 LGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAER 675

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  +L+ +    +  VLLSNI+A+AG W+E A +R L+K+ GV K PG SWI
Sbjct: 676 AAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWI 728



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 270/586 (46%), Gaps = 55/586 (9%)

Query: 26  ISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           I ++  S++G   DA+ +++Q+  S    PD  +  + + AC    +   G QLH + ++
Sbjct: 151 IMISGYSQNGQENDAIIMYIQMLRSGYF-PDQLTFGSIIKACCIAGDIDLGGQLHGHVIK 209

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           +G   +    N ++S+Y     +     VF+ I   D+ SW +                 
Sbjct: 210 SGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWAS----------------- 252

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN-YSFASVLSVCDAGL- 203
                         MITG T+ GYE   + LFR+M +  V + N + F SV S C + L 
Sbjct: 253 --------------MITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLK 298

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            EFGRQ+  +  K G    V    +L  MY   G +  A + F + +    D +S+N ++
Sbjct: 299 PEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESP--DLVSWNAII 356

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             LA+   V EA+  F  M+   L P ++TF++++ AC  P     G Q+H+  +K G +
Sbjct: 357 AALAN-SDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLD 415

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLE 379
              +V N+ +TMY+ C  + +A  +F  + E  ++VSWN ++S  +Q      A   +  
Sbjct: 416 KVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKL 475

Query: 380 MQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M     +PD  T  ++L +      +E+   +H F   +G++ ++ VSN LI  YAK   
Sbjct: 476 MLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGL 535

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +K A  +F +    +I++W++LI G+   G   + L  F  +    ++P+E T    LS+
Sbjct: 536 LKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSA 595

Query: 497 CARISSLRHGKQIHGYV-LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM----IEK 551
           C+ I  +  G  ++  + ++  +       + M+ L A+ G   C     N +     + 
Sbjct: 596 CSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAG---CLYEAENFIKKTGFDP 652

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           D   W  L+++   HG    A    +A +++ ++ P  +    +LS
Sbjct: 653 DITMWKTLLASCKTHGNVDIAE---RAAENILKLDPSNSAALVLLS 695



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 133/284 (46%), Gaps = 39/284 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  +A L+ S    +A++ F Q IH    L PD  +    L AC +      G Q+
Sbjct: 349 LVSWNAIIAALANSD-VNEAIYFFCQMIHMG--LMPDDITFLNLLCACGSPMTLNQGMQI 405

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI-QNPDVYSWTTFLSACTKMGH 138
           H+Y ++ GL     V N++L++Y    +L     VF +I +N ++ SW   LSAC++   
Sbjct: 406 HSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQ--- 462

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                    K P     ++  M               LF E      + DN +  ++L  
Sbjct: 463 --------HKQPGEAFRLFKLM---------------LFSEN-----KPDNITITTILGT 494

Query: 199 CDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C   + LE G Q+H    KSG    VSV N LI MY  CG +  A  VF+  +    D +
Sbjct: 495 CAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNP--DIV 552

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           S++ ++ G A  G  +EAL  FR M    ++P+E+T++ V+SAC
Sbjct: 553 SWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSAC 596



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 41/215 (19%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+  S+     +A  LF  +  S   KPD  +++T L  CA L +   GNQ+H
Sbjct: 450 LVSWNAILSACSQHKQPGEAFRLFKLMLFSEN-KPDNITITTILGTCAELVSLEVGNQVH 508

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +++++GL     V+N ++ +Y     L   + VF   QNPD+ SW++            
Sbjct: 509 CFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSS------------ 556

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                              +I G  + G     + LFR M  L V+ +  ++  VLS C 
Sbjct: 557 -------------------LIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACS 597

Query: 201 -AGLLEFGRQLHSLV--------TKSGFSCLVSVV 226
             GL+E G  L++ +        T+   SC+V ++
Sbjct: 598 HIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLL 632


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/674 (35%), Positives = 368/674 (54%), Gaps = 20/674 (2%)

Query: 72  NAAF-GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV----FSEIQNPDVYSW 126
           N  F G + +   +R G++   H    +L L  ++ D+     V    F    + DVY  
Sbjct: 138 NGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVG 197

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDV 185
            T L      G ++ A  +FD+MP+RD+  +N +I   + NG Y +     F  + +  +
Sbjct: 198 NTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVI 257

Query: 186 RRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           + +  S  S+L +  A L   E  R++H    K G    V+  NAL+  Y  CG+V    
Sbjct: 258 KPNLVSVISLLPI-SAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALW 316

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
           +VF E      + +S+N +++GLA  GR  +AL  FR M+ A  +P+ +T  S++   + 
Sbjct: 317 QVFNETVEK--NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVE 374

Query: 303 --CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
             C + G ++H  +M+ G E    ++N+ I MY+  G   EA  IF  L  ++IVSWN M
Sbjct: 375 LECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAM 434

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           I+ YA   L   AI   ++MQ  G  P+  TF ++L   A  GF+   + IHA     G+
Sbjct: 435 IANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGL 494

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +++ VSN+LI  YAK   +  A  +F N S ++ +++N LI G+      +Q L  FSE
Sbjct: 495 TSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSE 553

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           + +   +PD  +    +S+CA +++L+ GK++HG  L+N+L S + + N+++  Y KCG 
Sbjct: 554 MRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGR 613

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D + R+FN ++ KD  SWN +I  Y   GE + A+S F+AM+D   ++ D  ++ AVLS
Sbjct: 614 IDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRD-DTVQYDLVSYIAVLS 672

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSH GLV+ G + F  M+      P E H +CM+DLLGRAG+++EA ++I    I   +
Sbjct: 673 ACSHGGLVERGWQYFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDA 731

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
           + W AL  AC  +GN+ LGR  A  L E +      Y+LLSNIYA  G W+EA  IREL+
Sbjct: 732 NIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELM 791

Query: 718 KRTGVIKQPGCSWI 731
           K  G  K PGCSW+
Sbjct: 792 KSRGAKKNPGCSWV 805



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 133/603 (22%), Positives = 268/603 (44%), Gaps = 52/603 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  LS +G Y +A + +  +     +KP++ S+ + L   A L +     ++H Y++
Sbjct: 229 NTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSV 288

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +     N ++  Y     + ++ +VF+E    +  SW                  
Sbjct: 289 KVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSW------------------ 330

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                        N++I G    G     +  FR M     + ++ + +S+L V  +   
Sbjct: 331 -------------NSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELEC 377

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G+++H    + G    + + N+LI MY   G+  +A  +F        + +S+N M+
Sbjct: 378 FKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRR--NIVSWNAMI 435

Query: 264 DGLASVGRVEEALIRFR-DMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKS 317
              A + R+    IRF   M      P+ +TF +V+ A  C R+G+     ++HA  ++ 
Sbjct: 436 ANYA-LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPA--CARLGFLGPGKEIHAMGVRI 492

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G  +   VSN+ I MY+ CG +  A  +F     KD VS+N +I  Y++ +    ++  +
Sbjct: 493 GLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLF 551

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
            EM+ +G +PD  +F  ++++   +  ++    +H     N + +++ VSN+L+  Y K 
Sbjct: 552 SEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKC 611

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI  A ++F+ +  +++ +WNT+I G+ + G     +  F  +    ++ D  +    L
Sbjct: 612 GRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVL 671

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDT 553
           S+C+    +  G Q    +L   L         M+ L  + G ++ + ++   + I  D 
Sbjct: 672 SACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDA 731

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIF 612
             W AL+ A   +G  +      +A + +  +KP    +  +LS   +  G  D+  +I 
Sbjct: 732 NIWGALLGACRIYGNVELGR---RAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIR 788

Query: 613 DSM 615
           + M
Sbjct: 789 ELM 791



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 161/376 (42%), Gaps = 45/376 (11%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N  +  ++  N  +AN + +    +A+   +Q+  + +  P+  + +  L ACA L    
Sbjct: 422 NLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC-PNAVTFTNVLPACARLGFLG 480

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++HA  +R GL +   V+N+++ +Y     L S + VF+  +  +V           
Sbjct: 481 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEV----------- 529

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                 YN +I G +E       + LF EM  L  + D  SF  
Sbjct: 530 ---------------------SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVG 568

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+S C +   L+ G+++H +  ++     + V N+L+  Y  CG +  AC++F +     
Sbjct: 569 VISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI--LF 626

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQ 309
            D  S+N M+ G   +G +E A+  F  M   +++   +++++V+SAC    L  R G+Q
Sbjct: 627 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVER-GWQ 685

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YA 365
             ++ +    E         + +    G ++EA  +  +L    D   W  ++     Y 
Sbjct: 686 YFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 745

Query: 366 QRNLGRSAILAYLEMQ 381
              LGR A     E++
Sbjct: 746 NVELGRRAAEHLFELK 761



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 12/268 (4%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           NTS++  +  NI +   S +     +L+LF ++    K KPD+ S    ++ACANL    
Sbjct: 522 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-KPDVVSFVGVISACANLAALK 580

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H  ALR  L ++  V+N++L  Y     +    R+F++I   DV SW T +    
Sbjct: 581 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 640

Query: 135 KMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM--HKLDVRRD 188
            +G ++ A  +F+ M D     DL  Y A+++ C+  G  + G   F EM   +L+    
Sbjct: 641 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEM 700

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +Y+   V  +  AG +E   +   L+ +   +   ++  AL+      GNV    +  E 
Sbjct: 701 HYT-CMVDLLGRAGFVE---EAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEH 756

Query: 249 AKGYVCDHISYNVMMDGL-ASVGRVEEA 275
                  H  Y +++  + A  GR +EA
Sbjct: 757 LFELKPQHCGYYILLSNIYAETGRWDEA 784



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 7/225 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIE-- 550
           L+ C+++ SL   KQ+H   + N  + + +SL  ++I  YAK         +FN   +  
Sbjct: 61  LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQNC 120

Query: 551 KDTISWNALISAYAQHGEGK-EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           +    WN LI A++    G  +    +  M   G ++ D  TF  VL  CS +  +  G 
Sbjct: 121 RTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRG-VQLDDHTFPFVLKLCSDSFDICKGM 179

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            +   +V   GF       + +L L G  G+L++A R+ + +  +    +W  +    + 
Sbjct: 180 EV-HGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFD-EMPERDVVSWNTIIGLLSV 237

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
           +G+    R     ++ R   KP++  ++S +  +A L +E    R
Sbjct: 238 NGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRR 282


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/618 (33%), Positives = 344/618 (55%), Gaps = 12/618 (1%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +     ++ C+K   VD A  VFDKMP ++L  +++M++  ++ GY +  + +F ++ 
Sbjct: 83  DTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQ 142

Query: 182 KLDVRRDN-YSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           +      N +  ASV+  C   G++E G QLH  V +SGF   V V  +LI  Y   GN+
Sbjct: 143 RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNI 202

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A  VF++        +++  ++ G    GR   +L  F  M   ++ P      SV+S
Sbjct: 203 EEARLVFDQLSEKTA--VTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLS 260

Query: 300 ACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G Q+HA  ++ G E   SV N  I  Y+ C ++     +F ++  K+I+S
Sbjct: 261 ACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIIS 320

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVF 413
           W TMIS Y Q +    A+  + EM  +G +PD F   S+L S G  E +E    +HA+  
Sbjct: 321 WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTI 380

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              + ++  V N LI  YAK+  +  A ++F  M+ +N+I++N +I G+       + L+
Sbjct: 381 KANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALE 440

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F E+ +   +P+E+T +  +++ + ++SLRHG+Q H  ++K  L     + NA++ +YA
Sbjct: 441 LFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYA 500

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG ++ + ++FN  I +D + WN++IS +AQHGE +EA+  F+ M   G I+P+  TF 
Sbjct: 501 KCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG-IQPNYVTFV 559

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           AVLSACSHAG V+DG   F+SM   +G  P  +H +C++ LLGR+G L EA+  I    I
Sbjct: 560 AVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPI 618

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W +L SAC   GN+ LG+  A + +  +      Y+LLSNI+A+ G+W +   +
Sbjct: 619 EPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKV 678

Query: 714 RELLKRTGVIKQPGCSWI 731
           R+ +  + V+K+PG SWI
Sbjct: 679 RDRMDSSEVVKEPGRSWI 696



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 235/476 (49%), Gaps = 58/476 (12%)

Query: 284 VASLRPSELTFVSVMSACLC--PRVGYQV-HAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           + +LRP    F +++   +   P + Y++ H Q + SG ++ T ++N  I + S   ++D
Sbjct: 42  IPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVD 101

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASS 399
            A ++F ++  K++++W++M+S Y+Q+     A++ ++++Q   G  P+EF   S++ + 
Sbjct: 102 NARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRAC 161

Query: 400 ---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
              G +E    +H FV  +G   ++ V  +LI  Y+KN  I++A  +F  +S +  +TW 
Sbjct: 162 TQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWT 221

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           T+I G+   G     L+ F+++  + + PD Y +S  LS+C+ +  L  GKQIH YVL+ 
Sbjct: 222 TIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRR 281

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                +S+ N +I  Y KC  +    ++F+ M+ K+ ISW  +IS Y Q+    EA+  F
Sbjct: 282 GTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLF 341

Query: 577 KAMQDVGRIKPDQATFTAVLSACS-----------HA---------------GLVD---- 606
             M  +G  KPD    T+VL++C            HA               GL+D    
Sbjct: 342 GEMNRLG-WKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 400

Query: 607 -----DGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSD 658
                D  ++FD M        AE ++   + M++       L EA  + +   ++ +  
Sbjct: 401 SNLLIDAKKVFDVM--------AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKP 452

Query: 659 NWW---ALFSACAAHGNLRLGRIIAGLLLEREQDK-PSVYVLLSNIYAAAGLWEEA 710
           N +   AL +A +   +LR G+     L++   D  P V   L ++YA  G  EEA
Sbjct: 453 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEA 508



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 207/450 (46%), Gaps = 78/450 (17%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S+ G+ ++AL +FV +       P+ + L++ + AC  L     G QLH + +R+G    
Sbjct: 126 SQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 185

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
            +V  +++  Y    ++   + VF ++      +WTT ++  TK G    + E+F +M  
Sbjct: 186 VYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRE 245

Query: 150 ----PDR---------------------------------DLPVYNAMI----------- 161
               PDR                                 D+ V N +I           
Sbjct: 246 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 305

Query: 162 --------------------TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
                               +G  +N ++   + LF EM++L  + D ++  SVL+ C +
Sbjct: 306 GRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGS 365

Query: 202 -GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-EAKGYVCDHISY 259
              LE GRQ+H+   K+       V N LI MY     ++DA KVF+  A+  V   ISY
Sbjct: 366 REALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNV---ISY 422

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
           N M++G +S  ++ EAL  F +M V   +P+E TF ++++A       R G Q H Q +K
Sbjct: 423 NAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVK 482

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G +    V+NA + MY+ CG I+EA  +F     +D+V WN+MIST+AQ      A+  
Sbjct: 483 MGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGM 542

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           + EM   GI+P+  TF ++L++      VE
Sbjct: 543 FREMMKEGIQPNYVTFVAVLSACSHAGRVE 572



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 11/233 (4%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           L +  LRP     +  L      + + H K IHG ++ + L S   L N +I + +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D +  VF+ M  K+ I+W++++S Y+Q G  +EA+  F  +Q      P++    +V+ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC+  G+V+ G ++   +V   GF       + ++D   + G ++EA R++  Q  +  +
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTA 217

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLL---EREQD-KPSVYVLLSNIYAAAGL 706
             W  + +     G  + GR    L L    RE +  P  YV+ S + A + L
Sbjct: 218 VTWTTIIA-----GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSML 265


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/660 (35%), Positives = 362/660 (54%), Gaps = 17/660 (2%)

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRV----FSEIQNPDVYSWTTFLSACTKMGHV 139
           +R G++   H    +L L  ++ D+     V    F    + DVY   T L      G +
Sbjct: 2   VRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFL 61

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           + A  +FD+MP+RD+  +N +I   + NG Y +     F  + +  ++ +  S  S+L +
Sbjct: 62  NDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPI 121

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             A    E  R++H    K G    V+  NAL+  Y  CG+V    +VF E      + +
Sbjct: 122 SAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEK--NEV 179

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           S+N +++GLA  GR  +AL  FR M+ A  +P+ +T  S++   +   C + G ++H  +
Sbjct: 180 SWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFS 239

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           M+ G E    ++N+ I MY+  G   EA  IF  L  ++IVSWN MI+ YA   L   AI
Sbjct: 240 MRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAI 299

Query: 375 LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
              ++MQ  G  P+  TF ++L   A  GF+   + IHA     G+ +++ VSN+LI  Y
Sbjct: 300 RFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMY 359

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   +  A  +F N S ++ +++N LI G+      +Q L  FSE+ +   +PD  +  
Sbjct: 360 AKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 418

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             +S+CA +++L+ GK++HG  L+N+L S + + N+++  Y KCG +D + R+FN ++ K
Sbjct: 419 GVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFK 478

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D  SWN +I  Y   GE + A+S F+AM+D   ++ D  ++ AVLSACSH GLV+ G + 
Sbjct: 479 DVASWNTMILGYGMIGELETAISMFEAMRD-DTVQYDLVSYIAVLSACSHGGLVERGWQY 537

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           F  M+      P E H +CM+DLLGRAG+++EA ++I    I   ++ W AL  AC  +G
Sbjct: 538 FSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 596

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ LGR  A  L E +      Y+LLSNIYA  G W+EA  IREL+K  G  K PGCSW+
Sbjct: 597 NVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWV 656



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/607 (21%), Positives = 270/607 (44%), Gaps = 52/607 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +  LS +G Y +A + +  +     +KP++ S+ + L   A L +     ++H
Sbjct: 76  VVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIH 135

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y+++ GL +     N ++  Y     + ++ +VF+E    +  SW              
Sbjct: 136 CYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSW-------------- 181

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-C 199
                            N++I G    G     +  FR M     + ++ + +S+L V  
Sbjct: 182 -----------------NSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLV 224

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +    + G+++H    + G    + + N+LI MY   G+  +A  +F        + +S+
Sbjct: 225 ELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRR--NIVSW 282

Query: 260 NVMMDGLASVGRVEEALIRFR-DMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQ 313
           N M+   A + R+    IRF   M      P+ +TF +V+ A  C R+G+     ++HA 
Sbjct: 283 NAMIANYA-LNRLPLEAIRFVIQMQETGECPNAVTFTNVLPA--CARLGFLGPGKEIHAM 339

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ G  +   VSN+ I MY+ CG +  A  +F     KD VS+N +I  Y++ +    +
Sbjct: 340 GVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF-NTSRKDEVSYNILIIGYSETDDCLQS 398

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           +  + EM+ +G +PD  +F  ++++   +  ++    +H     N + +++ VSN+L+  
Sbjct: 399 LNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDF 458

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K  RI  A ++F+ +  +++ +WNT+I G+ + G     +  F  +    ++ D  + 
Sbjct: 459 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 518

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-I 549
              LS+C+    +  G Q    +L   L         M+ L  + G ++ + ++   + I
Sbjct: 519 IAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPI 578

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDG 608
             D   W AL+ A   +G  +      +A + +  +KP    +  +LS   +  G  D+ 
Sbjct: 579 APDANIWGALLGACRIYGNVELGR---RAAEHLFELKPQHCGYYILLSNIYAETGRWDEA 635

Query: 609 TRIFDSM 615
            +I + M
Sbjct: 636 NKIRELM 642



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 85/376 (22%), Positives = 161/376 (42%), Gaps = 45/376 (11%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N  +  ++  N  +AN + +    +A+   +Q+  + +  P+  + +  L ACA L    
Sbjct: 273 NLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGEC-PNAVTFTNVLPACARLGFLG 331

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++HA  +R GL +   V+N+++ +Y     L S + VF+  +  +V           
Sbjct: 332 PGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEV----------- 380

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                 YN +I G +E       + LF EM  L  + D  SF  
Sbjct: 381 ---------------------SYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVG 419

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+S C +   L+ G+++H +  ++     + V N+L+  Y  CG +  AC++F +     
Sbjct: 420 VISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQI--LF 477

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQ 309
            D  S+N M+ G   +G +E A+  F  M   +++   +++++V+SAC    L  R G+Q
Sbjct: 478 KDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVER-GWQ 536

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YA 365
             ++ +    E         + +    G ++EA  +  +L    D   W  ++     Y 
Sbjct: 537 YFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYG 596

Query: 366 QRNLGRSAILAYLEMQ 381
              LGR A     E++
Sbjct: 597 NVELGRRAAEHLFELK 612



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 12/268 (4%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           NTS++  +  NI +   S +     +L+LF ++    K KPD+ S    ++ACANL    
Sbjct: 373 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK-KPDVVSFVGVISACANLAALK 431

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H  ALR  L ++  V+N++L  Y     +    R+F++I   DV SW T +    
Sbjct: 432 QGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYG 491

Query: 135 KMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM--HKLDVRRD 188
            +G ++ A  +F+ M D     DL  Y A+++ C+  G  + G   F EM   +L+    
Sbjct: 492 MIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEM 551

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +Y+   V  +  AG +E   +   L+ +   +   ++  AL+      GNV    +  E 
Sbjct: 552 HYT-CMVDLLGRAGFVE---EAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEH 607

Query: 249 AKGYVCDHISYNVMMDGL-ASVGRVEEA 275
                  H  Y +++  + A  GR +EA
Sbjct: 608 LFELKPQHCGYYILLSNIYAETGRWDEA 635


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/741 (32%), Positives = 391/741 (52%), Gaps = 55/741 (7%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLST 62
           +I AT +  S    E L+  N  + +L +S  Y++AL  F   Q +SS K++   Y   +
Sbjct: 17  QILATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--S 72

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            + AC++ R+ A G ++H + L +  K    + N ILS+Y                    
Sbjct: 73  LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG------------------- 113

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                       K G +  A EVFD MP+R+L  Y ++ITG ++NG     I L+ +M +
Sbjct: 114 ------------KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161

Query: 183 LDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
            D+  D ++F S++  C    D GL   G+QLH+ V K   S  +   NALI MY     
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGL---GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSV 297
           + DA +VF      + D IS++ ++ G + +G   EAL   ++ML      P+E  F S 
Sbjct: 219 MSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276

Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + AC   L P  G Q+H   +KS          +   MY+ CG ++ A  +F +++  D 
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAF 411
            SWN +I+  A       A+  + +M+S G  PD  +  SLL A +  + + +   IH++
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQ 470
           +   G + ++ V N+L++ Y     +   + +F +  +  + ++WNT++   L +  PV+
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F  +L+SE  PD  T+   L  C  ISSL+ G Q+H Y LK  L  +  + N +I 
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L  + R+F+ M  +D +SW+ LI  YAQ G G+EA+  FK M+  G I+P+  
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG-IEPNHV 575

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  VL+ACSH GLV++G +++ +M  ++G  P ++H SC++DLL RAG L+EAER I+ 
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W  L SAC   GN+ L +  A  +L+ +    + +VLL +++A++G WE A
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A +R  +K+  V K PG SWI
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWI 716


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/716 (31%), Positives = 370/716 (51%), Gaps = 47/716 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L     SG+ ++A+ L      S K   D  +L + L  CA+ ++   G ++  +  
Sbjct: 65  NTQLRRFCESGNLENAVKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G     ++ + +  +Y N  DL    RVF E++      W   ++   K G  D++  
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSG- 178

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGL 203
                                        IGLF++M    V  D+Y+F+ V  S      
Sbjct: 179 ----------------------------SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G QLH  + KSGF    SV N+L+  Y     V  A KVF+E      D IS+N ++
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSII 268

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
           +G  S G  E+ L  F  MLV+ +     T VSV + C   R   +G  VH+  +K+ F 
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                 N  + MYS CG +D A  +F  + ++ +VS+ +MI+ YA+  L   A+  + EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  GI PD +T  ++L   A    ++  + +H ++  N +  +I VSNAL+  YAK   +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR--PDEYTLSVALS 495
           ++A  +F  M  ++II+WNT+I G+  N +  + L  F+ LL+ E R  PDE T++  L 
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLP 507

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +CA +S+   G++IHGY+++N   S   + N+++ +YAKCG L  +  +F+ +  KD +S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I+ Y  HG GKEA++ F  M+  G I+ D+ +F ++L ACSH+GLVD+G R F+ M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIM 626

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            ++    P  +H +C++D+L R G L +A R I +  I   +  W AL   C  H +++L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +A  + E E +    YVL++NIYA A  WE+   +R+ + + G+ K PGCSWI
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/498 (27%), Positives = 249/498 (50%), Gaps = 12/498 (2%)

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           DR +   N  +    E+G  +  + L     K D+  D  +  SVL +C D+  L+ G++
Sbjct: 58  DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKE 115

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           + + +  +GF    ++ + L  MY NCG++ +A +VF+E K  +   + +N++M+ LA  
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK--IEKALFWNILMNELAKS 173

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
           G    ++  F+ M+ + +     TF  V    S+      G Q+H   +KSGF    SV 
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N+ +  Y    ++D A  +F  + E+D++SWN++I+ Y    L    +  +++M   GI 
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293

Query: 387 PDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D  T  S+ A    S  I +   +H+           +  N L+  Y+K   +  A  +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  MS R+++++ ++I G+   G   + ++ F E+    + PD YT++  L+ CAR   L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GK++H ++ +N+L   + + NA++ +YAKCG +  +  VF+ M  KD ISWN +I  Y
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           +++    EA+S F  + +  R  PD+ T   VL AC+     D G  I   ++ + G+  
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN-GYFS 532

Query: 624 AEDHLSCMLDLLGRAGYL 641
                + ++D+  + G L
Sbjct: 533 DRHVANSLVDMYAKCGAL 550



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 283/591 (47%), Gaps = 51/591 (8%)

Query: 19  ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           E  L  NI +  L++SG +  ++ LF ++ SS  ++ D Y+ S    + ++LR+   G Q
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHGGEQ 216

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH + L++G      V N++++ Y   + + S ++VF E+   DV SW            
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW------------ 264

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              N++I G   NG  + G+ +F +M    +  D  +  SV + 
Sbjct: 265 -------------------NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C D+ L+  GR +HS+  K+ FS      N L+ MY  CG++  A  VF E        +
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV--V 363

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SY  M+ G A  G   EA+  F +M    + P   T  +V++ C   R+   G +VH   
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423

Query: 315 MKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            ++  GF+ +  VSNA + MY+ CG + EA ++F+ ++ KDI+SWNT+I  Y++      
Sbjct: 424 KENDLGFDIF--VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481

Query: 373 AI-LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           A+ L  L ++     PDE T   +L   AS    +    IH ++  NG  ++  V+N+L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK   +  A+ +F +++ +++++W  +I G+ ++GF  + +  F+++  + +  DE 
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFN 546
           +    L +C+    +  G +    +     I       A ++ + A+ GDL  + R + N
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           M I  D   W AL+     H + K A    K  + V  ++P+   +  +++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAE---KVAEKVFELEPENTGYYVLMA 709


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/716 (32%), Positives = 385/716 (53%), Gaps = 49/716 (6%)

Query: 28  LANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           + +L +   +++AL  F   Q  SS  LK   Y+    + AC++LR+   G ++H + L 
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYT--HLINACSSLRSLEHGRKIHRHMLT 126

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
              +    + N ILS+Y                                K G +  A  +
Sbjct: 127 CNYQPDMILQNHILSMYG-------------------------------KCGSLKEARNM 155

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
           FD MP +++  + +MI+G +  G ED  I L+ +M +     D+++F S++  C +GL +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC-SGLDD 214

Query: 206 F--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           F   RQLH+ V KS F   +   NALI+MY     + DA  VF  ++  + D IS+  M+
Sbjct: 215 FKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF--SRIIIKDLISWGSMI 272

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
            G + +G   EAL  FR+ML  S+ +P+E  F S  SAC   L P  G Q+H   +K G 
Sbjct: 273 AGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL 332

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +      +   MY+ CG ++ A  +F  +++ D+V+WN +I+ +A  +  + +   + +
Sbjct: 333 GSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQ 392

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  G+ P++ T  SLL +     M+     +H+++   G   +I V N+L+S Y+K   
Sbjct: 393 MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSN 452

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A Q+F ++  + +I++WNTL+   L      + L+    +  S ++PD  TL+  L 
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLV 512

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S  +I+S   G QIH +++K+ L   +S+ NA+I +Y KCG L+C+ ++F+ +   D IS
Sbjct: 513 SSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIIS 572

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W++LI  YAQ G GKEA   F+ M+ +G +KP++ TF  +L+ACSH G+V++G +++ +M
Sbjct: 573 WSSLIVGYAQAGCGKEAFELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGLKLYRTM 631

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             DY   P ++H SCM+DLL RAG LD AE  I           W  L +AC  HGNL +
Sbjct: 632 QEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEV 691

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G+  A  +L+ +    +  V+L NI+A++G W++ A +R  ++R  V K PG SWI
Sbjct: 692 GKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 232/716 (32%), Positives = 385/716 (53%), Gaps = 49/716 (6%)

Query: 28  LANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           + +L +   +++AL  F   Q  SS  LK   Y+    + AC++LR+   G ++H + L 
Sbjct: 69  IISLCKKNLHREALKAFDIFQKCSSSPLKSVTYT--HLINACSSLRSLEHGRKIHRHMLT 126

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
              +    + N ILS+Y                                K G +  A  +
Sbjct: 127 CNYQPDMILQNHILSMYG-------------------------------KCGSLKEARNM 155

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
           FD MP +++  + +MI+G +  G ED  I L+ +M +     D+++F S++  C +GL +
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSC-SGLDD 214

Query: 206 F--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           F   RQLH+ V KS F   +   NALI+MY     + DA  VF  ++  + D IS+  M+
Sbjct: 215 FKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVF--SRIIIKDLISWGSMI 272

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
            G + +G   EAL  FR+ML  S+ +P+E  F S  SAC   L P  G Q+H   +K G 
Sbjct: 273 AGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGL 332

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +      +   MY+ CG ++ A  +F  +++ D+V+WN +I+ +A  +  + +   + +
Sbjct: 333 GSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQ 392

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  G+ P++ T  SLL +     M+     +H+++   G   +I V N+L+S Y+K   
Sbjct: 393 MRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSN 452

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A Q+F ++  + +I++WNTL+   L      + L+    +  S ++PD  TL+  L 
Sbjct: 453 LNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLV 512

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S  +I+S   G QIH +++K+ L   +S+ NA+I +Y KCG L+C+ ++F+ +   D IS
Sbjct: 513 SSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIIS 572

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W++LI  YAQ G GKEA   F+ M+ +G +KP++ TF  +L+ACSH G+V++G +++ +M
Sbjct: 573 WSSLIVGYAQAGCGKEAFELFRTMRGLG-VKPNEITFVGILTACSHIGMVEEGLKLYRTM 631

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             DY   P ++H SCM+DLL RAG LD AE  I           W  L +AC  HGNL +
Sbjct: 632 QEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEV 691

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G+  A  +L+ +    +  V+L NI+A++G W++ A +R  ++R  V K PG SWI
Sbjct: 692 GKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 334/612 (54%), Gaps = 10/612 (1%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  +S   + G VD A  VF+ +  +   +Y  M+ G  +    D  +  F  M   +V 
Sbjct: 73  TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              Y+F  +L VC D   L  G+++H L+ KSGFS  +  +  L  MY  C  V +A KV
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACL 302
           F+       D +S+N ++ G +  G    AL     M   +L+PS +T VSV+   SA  
Sbjct: 193 FDRMPER--DLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALR 250

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G ++H  AM++GF++  +++ A + MY+ CG +  A ++F  + E+++VSWN+MI 
Sbjct: 251 LIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMID 310

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFT-FGSLLASS--GFIEMVEMIHAFVFINGIIT 419
            Y Q    + A++ + +M   G++P + +  G+L A +  G +E    IH       +  
Sbjct: 311 AYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDR 370

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N+ V N+LIS Y K + +  A  +F  +  R I++WN +I GF  NG P++ L +FS++ 
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQ 430

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              ++PD +T    +++ A +S   H K IHG V++N L   + +  A++ +YAKCG + 
Sbjct: 431 ARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIM 490

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  +F+MM E+   +WNA+I  Y  HG GK A+  F+ MQ  G I+P+  TF +V+SAC
Sbjct: 491 IARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK-GTIRPNGVTFLSVISAC 549

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH+GLV+ G + F  M  +Y   P+ DH   M+DLLGRAG L+EA   I    ++   + 
Sbjct: 550 SHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           + A+  AC  H N+     +A  L E   +    +VLL+NIY AA +WE+   +R  + R
Sbjct: 610 YGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669

Query: 720 TGVIKQPGCSWI 731
            G+ K PGCS +
Sbjct: 670 QGLRKTPGCSMV 681



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/558 (24%), Positives = 259/558 (46%), Gaps = 49/558 (8%)

Query: 23  KLNI----SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           KLN+     L   ++      AL  FV++    +++P +Y+ +  L  C +      G +
Sbjct: 98  KLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD-EVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H   +++G          + ++Y   R +   ++VF  +   D+ SW T ++  ++ G 
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGM 216

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
              A E+ + M              C EN                 ++    +  SVL  
Sbjct: 217 ARMALEMVNLM--------------CEEN-----------------LKPSFITIVSVLPA 245

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             A  L+  G+++H    ++GF  LV++  AL+ MY  CG++  A  +F+       + +
Sbjct: 246 VSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLER--NVV 303

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           S+N M+D        +EA++ F+ ML   ++P++++ +  + AC        G  +H  +
Sbjct: 304 SWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           ++   +   SV N+ I+MY  C ++D A  +F +LQ + IVSWN MI  +AQ      A+
Sbjct: 364 VELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEAL 423

Query: 375 LAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             + +MQ+  ++PD FT+ S+   +A        + IH  V  N +  N+ V+ AL+  Y
Sbjct: 424 NYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMY 483

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   I  A  IF  MS R++ TWN +I+G+  +G     L+ F E+    +RP+  T  
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFL 543

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLRVFNMMI 549
             +S+C+    +  G +   +++K N   + S+ +  AM+ L  + G L+ +      M 
Sbjct: 544 SVISACSHSGLVEAGLKCF-HMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602

Query: 550 EKDTIS-WNALISAYAQH 566
            K  ++ + A++ A   H
Sbjct: 603 VKPAVNVYGAMLGACQIH 620



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 226/494 (45%), Gaps = 49/494 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  S++G  + AL + V +     LKP   ++ + L A + LR    G ++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEM-VNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIH 259

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YA+RAG  +  ++A  ++ +Y     L + + +F  +   +V SW              
Sbjct: 260 GYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSW-------------- 305

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                            N+MI    +N      + +F++M    V+  + S    L  C 
Sbjct: 306 -----------------NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACA 348

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D G LE GR +H L  +      VSVVN+LI+MY  C  V  A  +F + +      +S+
Sbjct: 349 DLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTI--VSW 406

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
           N M+ G A  GR  EAL  F  M   +++P   T+VSV++A     + +    +H   M+
Sbjct: 407 NAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +  +    V+ A + MY+ CG I  A +IF  + E+ + +WN MI  Y    +G++A+  
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALEL 526

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYA 432
           + EMQ   IRP+  TF S++++   SG +E  ++  H       I  ++    A++    
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLG 586

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYT 489
           +  R+ +A+     M  +  +     + G +L    +    +F+E +   + EL P++  
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVN----VYGAMLGACQIHKNVNFAEKVAERLFELNPEDGG 642

Query: 490 LSVALSSCARISSL 503
             V L++  R +S+
Sbjct: 643 YHVLLANIYRAASM 656


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 207/617 (33%), Positives = 336/617 (54%), Gaps = 9/617 (1%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           ++PDV      L+   K G +  A ++FD+MP +++  + ++++G T NG  +  + +F 
Sbjct: 44  ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M +  V  ++++  + L  C D G L  G Q+HSL  ++GF+    + + LI MY  CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A +VF+       D + Y  ++      G  E A      ML   L+P+E T  ++
Sbjct: 164 SLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221

Query: 298 MSACLCPRV-GYQVHAQAMKS-GFEAYTSVSNAA-ITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  PRV G Q+H   +K  G  + +  S+ A I  YS  G+   A  +F  L  K++
Sbjct: 222 LTAC--PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           VSW +M+  Y +      A+  + +M S G+ P+EF    +L + G I +   +H     
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIK 339

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           + +IT+I+VSNAL+S Y +   +++   + + +   ++++W T I+    NGF  + +  
Sbjct: 340 HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 399

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
             ++      P+ Y  S  LSSCA ++SL  G Q H   LK    S++  GNA+I +Y+K
Sbjct: 400 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSK 459

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG +  +   F++M   D  SWN+LI  +AQHG+  +A+  F  M+  G IKPD +TF  
Sbjct: 460 CGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG-IKPDDSTFLG 518

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           VL  C+H+G+V++G   F  M++ Y F PA  H +CM+D+LGR G  DEA R+IN    +
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
             +  W  L ++C  H NL +G++ A  L+E      + YVL+SNIYA  G WE+A  +R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 715 ELLKRTGVIKQPGCSWI 731
             +  TGV K  GCSWI
Sbjct: 639 RRMDETGVKKDAGCSWI 655



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 250/546 (45%), Gaps = 44/546 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +R+G  + AL +F  +  S  + P+ ++ +  L ACA+L     G Q+H+ A+RAG
Sbjct: 86  MSGYTRNGRPEAALAMFADMVES-GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG 144

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + + ++ +Y     L + K VF  + +PDV  +T+ +SA  + G  + A E   
Sbjct: 145 FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE--- 201

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                      A+I                 +M K  ++ + ++  ++L+ C   L   G
Sbjct: 202 -----------ALI-----------------QMLKQGLKPNEHTMTTILTACPRVL---G 230

Query: 208 RQLHS-LVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +Q+H  L+ K G  S  V    ALI  Y   G    A  VF+    +  + +S+  MM  
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL--HCKNVVSWCSMMQL 288

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
               GR+EEAL  F DM+   + P+E     V+ AC    +G Q+H  A+K        V
Sbjct: 289 YIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRV 348

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA ++MY   G ++E   +  +++  D+VSW T IS   Q   G  AI    +M S G 
Sbjct: 349 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 408

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P+ + F S+L+S   +  ++     H      G  + I   NALI+ Y+K  ++  A  
Sbjct: 409 TPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 468

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F  M   ++ +WN+LI+G   +G   + L+ FS++  + ++PD+ T    L  C     
Sbjct: 469 AFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGM 528

Query: 503 LRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALI 560
           +  G+     ++   +     S    MI +  + G  D +LR+ N M  E D + W  L+
Sbjct: 529 VEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 588

Query: 561 SAYAQH 566
           ++   H
Sbjct: 589 ASCKLH 594


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/725 (30%), Positives = 372/725 (51%), Gaps = 70/725 (9%)

Query: 18  KELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +EL  + N+S    L+  +++G  ++AL L+ Q+H +  + P  Y LS+ L++C      
Sbjct: 101 EELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRA-GVVPTPYVLSSVLSSCTKAELF 159

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           A G  +HA   + G  +   V N +++LY                               
Sbjct: 160 AQGRSVHAQGYKQGFCSETFVGNALITLY------------------------------- 188

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G    A  VF  MP RD   +N +I+G  +  + +  + +F EM    +  D  + +
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+L+ C + G L+ G QLHS + K+G S    +  +L+ +Y  CG+V  A  +F    G 
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN--LGN 306

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
             + + +N+++     +  + ++   F  M  A +RP++ T+  ++  C C     +G Q
Sbjct: 307 RTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQ 366

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H+ ++K+GFE+   VS   I MYS  G +++A  +   L+EKD+VSW +MI+ Y Q   
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEY 426

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + A+ A+ EMQ  GI PD     S ++    I+ +     IHA V+++G   ++ + NA
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNA 486

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ YA+  RI++A+  F  +  ++ ITWN L++GF  +G   + L+ F  +  S ++ +
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T   ALS+ A ++ ++ GKQIH  V+K     +  +GNA+I+LY KCG  + +   F+
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E++ +SWN +I++ +QHG G EA+  F  M+                          
Sbjct: 607 EMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK------------------------- 641

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F SM + YG  P  DH +C++D+ GRAG LD A++ +    I A +  W  L SA
Sbjct: 642 EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSA 701

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ +G + A  LLE E    + YVLLSN YA  G W     +R++++  GV K+P
Sbjct: 702 CKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEP 761

Query: 727 GCSWI 731
           G SWI
Sbjct: 762 GRSWI 766



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 182/657 (27%), Positives = 314/657 (47%), Gaps = 47/657 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHK-LKPDIYSLSTTLAAC-ANLRNAAFGNQLHA 81
           L  SLA           L LF      H  L P     +  L AC  N R      ++HA
Sbjct: 9   LGWSLAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHA 66

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A+  GL     V N ++ LY     ++  +RVF E+   D  SW               
Sbjct: 67  KAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWV-------------- 112

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-D 200
                            AM++G  +NG  +  + L+R+MH+  V    Y  +SVLS C  
Sbjct: 113 -----------------AMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTK 155

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           A L   GR +H+   K GF     V NALIT+Y  CG+   A +VF +      D +++N
Sbjct: 156 AELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHR--DTVTFN 213

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKS 317
            ++ G A     E AL  F +M  + L P  +T  S+++AC      + G Q+H+   K+
Sbjct: 214 TLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA 273

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G  +   +  + + +Y  CG ++ A +IF      ++V WN ++  + Q N    +   +
Sbjct: 274 GMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELF 333

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            +MQ+ GIRP++FT+  +L +   +G I++ E IH+     G  +++ VS  LI  Y+K 
Sbjct: 334 CQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY 393

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +++A ++   +  +++++W ++I G++ + +    L  F E+    + PD   L+ A+
Sbjct: 394 GWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAI 453

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S CA I ++R G QIH  V  +     +S+ NA++ LYA+CG +  +   F  +  KD I
Sbjct: 454 SGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEI 513

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           +WN L+S +AQ G  +EA+  F  M   G +K +  TF + LSA ++   +  G +I   
Sbjct: 514 TWNGLVSGFAQSGLHEEALKVFMRMDQSG-VKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           ++   G     +  + ++ L G+ G  ++A ++  S+  +    +W  + ++C+ HG
Sbjct: 573 VIKT-GHSFETEVGNALISLYGKCGSFEDA-KMEFSEMSERNEVSWNTIITSCSQHG 627


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 223/725 (30%), Positives = 375/725 (51%), Gaps = 47/725 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  +   N  +     SG Y +A+ L+  +     +  D  +  + L AC  L  +  G
Sbjct: 106 SERTIFSWNALMGAFVSSGKYLEAIELYKDMRVL-GVAIDACTFPSVLKACGALGESRLG 164

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI--QNPDVYSWTTFLSACT 134
            ++H  A++ G   +  V N ++++Y    DL   + +F  I  +  D  SW + +SA  
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G+                         C E       + LFR M ++ V  + Y+F +
Sbjct: 225 AEGN-------------------------CLE------ALSLFRRMQEVGVASNTYTFVA 253

Query: 195 VLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  V D   ++ G  +H  V KS     V V NALI MY  CG + DA +VFE     +
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFES---ML 310

Query: 254 C-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
           C D++S+N ++ GL       +AL  FRDM  +  +P +++ +++++A         G +
Sbjct: 311 CRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKE 370

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VHA A+++G ++   + N  + MY+ C  +      F  + EKD++SW T+I+ YAQ   
Sbjct: 371 VHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEF 430

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIE--MVEMIHAFVFINGIITNIQVSNA 426
              AI  + ++Q  G+  D    GS+L A SG      +  IH +VF   +  +I + NA
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNA 489

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +++ Y +   I  A + F ++  ++I++W ++I   + NG PV+ L+ F  L  + ++PD
Sbjct: 490 IVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPD 549

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
              +  ALS+ A +SSL+ GK+IHG++++     +  + ++++ +YA CG ++ S ++F+
Sbjct: 550 SIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFH 609

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            + ++D I W ++I+A   HG G +A++ FK M D   I PD  TF A+L ACSH+GL+ 
Sbjct: 610 SVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVI-PDHITFLALLYACSHSGLMV 668

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G R F+ M   Y   P  +H +CM+DLL R+  L+EA   + +  I+  S+ W AL  A
Sbjct: 669 EGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGA 728

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N  LG + A  LL+ + +    Y L+SNI+AA G W +   +R  +K  G+ K P
Sbjct: 729 CHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNP 788

Query: 727 GCSWI 731
           GCSWI
Sbjct: 789 GCSWI 793



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 183/671 (27%), Positives = 316/671 (47%), Gaps = 55/671 (8%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           S  L  C   +    G QLHA  L++ L A+  +A  ++ +Y     L    +VF E+  
Sbjct: 50  SLLLDLCVAAKALPQGQQLHALLLKSHLSAF--LATKLVLMYGKCGSLRDAVKVFDEMSE 107

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
             ++SW   + A    G    A E++     +D+ V    I  CT               
Sbjct: 108 RTIFSWNALMGAFVSSGKYLEAIELY-----KDMRVLGVAIDACT--------------- 147

Query: 181 HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                      F SVL  C A G    G ++H +  K G+   V V NALI MY  CG++
Sbjct: 148 -----------FPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDL 196

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A  +F+       D +S+N ++    + G   EAL  FR M    +  +  TFV+ + 
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQ 256

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
               P   ++G  +H   +KS   A   V+NA I MY+ CG++++A  +F  +  +D VS
Sbjct: 257 GVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVS 316

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFV 412
           WNT++S   Q  L   A+  + +MQ+ G +PD+ +  +L+A+SG     ++  E +HA+ 
Sbjct: 317 WNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKE-VHAYA 375

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             NG+ +N+Q+ N L+  YAK   +K     F  M  +++I+W T+I G+  N F ++ +
Sbjct: 376 IRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAI 435

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F ++ +  +  D   +   L +C+ + S    ++IHGYV K +L   M L NA++ +Y
Sbjct: 436 NLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQNAIVNVY 494

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            + G +D + R F  +  KD +SW ++I+    +G   EA+  F +++    I+PD    
Sbjct: 495 GEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQT-NIQPDSIAI 553

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            + LSA ++   +  G  I   ++   GF       S ++D+    G ++ + ++ +S  
Sbjct: 554 ISALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVK 612

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK---PSVYVLLSNIYAA--AGLW 707
            Q     W ++ +A   HG     + IA  L ++  D+   P     L+ +YA   +GL 
Sbjct: 613 -QRDLILWTSMINANGMHGCGN--KAIA--LFKKMTDQNVIPDHITFLALLYACSHSGLM 667

Query: 708 EEAANIRELLK 718
            E     E++K
Sbjct: 668 VEGKRFFEIMK 678


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 229/711 (32%), Positives = 367/711 (51%), Gaps = 39/711 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A   R+ +Y     LF ++    + KPD Y+ S+ LAACA+L    FG  + A  +
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVI 278

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +                                DV+  T  +    K GH+  A E
Sbjct: 279 KCGAE--------------------------------DVFVCTAIVDLYAKCGHMAEAME 306

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF ++P+  +  +  M++G T++      + +F+EM    V  +N +  SV+S C    +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H+ V KSGF    SV  ALI+MY   G++  + +VFE+       +I  NVM+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMI 425

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
              +   +  +A+  F  ML   LR  E +  S++S   C  +G QVH   +KSG     
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +V ++  T+YS CG ++E+  +F  +  KD   W +MIS + +    R AI  + EM   
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G  PDE T  ++L   +S   +   + IH +    GI   + + +AL++ Y+K   +K A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            Q++  +   + ++ ++LI+G+  +G    G   F +++MS    D + +S  L + A  
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
                G Q+H Y+ K  L ++ S+G++++T+Y+K G +D   + F+ +   D I+W ALI
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           ++YAQHG+  EA+  +  M++ G  KPD+ TF  VLSACSH GLV++     +SMV DYG
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P   H  CM+D LGR+G L EAE  IN+ HI+  +  W  L +AC  HG + LG++ A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAA 844

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +E E      Y+ LSNI A  G W+E    R+L+K TGV K+PG S +
Sbjct: 845 KKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 189/712 (26%), Positives = 348/712 (48%), Gaps = 59/712 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI ++   +   ++++L  F ++H     + +  S  + ++AC+ L+   F   +  + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACSALQAPLFSELVCCHTI 177

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G   Y  V + ++ ++          +VF +  + +VY W T ++   +  + +Y   
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALR--NQNYGA- 234

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           VFD                            LF EM     + D+Y+++SVL+ C A L 
Sbjct: 235 VFD----------------------------LFHEMCVGFQKPDSYTYSSVLAAC-ASLE 265

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L FG+ + + V K G    V V  A++ +Y  CG++ +A +VF          +S+ VM
Sbjct: 266 KLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV--VSWTVM 322

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
           + G         AL  F++M  + +  +  T  SV+SAC  P +     QVHA   KSGF
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARL---QEKDIVSWNTMISTYAQRNLGRSAILA 376
              +SV+ A I+MYS  G ID +  +F  L   Q ++IV  N MI++++Q      AI  
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +  M   G+R DEF+  SLL+    + + + +H +   +G++ ++ V ++L + Y+K   
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++++Y++F  +  ++   W ++I+GF   G+  + +  FSE+L     PDE TL+  L+ 
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C+   SL  GK+IHGY L+  +   M LG+A++ +Y+KCG L  + +V++ + E D +S 
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           ++LIS Y+QHG  ++    F+ M   G    D    +++L A + +     G ++  + +
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSG-FTMDSFAISSILKAAALSDESSLGAQV-HAYI 678

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNL 673
              G        S +L +  + G +D+  +    IN   + A    W AL ++ A HG  
Sbjct: 679 TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA----WTALIASYAQHGKA 734

Query: 674 RLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAGLWEEAA-NIRELLKRTGV 722
                +  L+ E+  + DK +   +LS   +  GL EE+  ++  ++K  G+
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLVEESYFHLNSMVKDYGI 785



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 177/623 (28%), Positives = 306/623 (49%), Gaps = 36/623 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV+   + LS  +  G +  A ++FD +P  D+   N MI+G  ++   +  +  F +MH
Sbjct: 83  DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142

Query: 182 KLDVRRDNYSFASVLSVCDAGLLEFGRQL---HSLVTKSGFSCLVSVVNALITMYFNCGN 238
            L    +  S+ SV+S C A       +L   H++  K G+     V +ALI ++     
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTI--KMGYFFYEVVESALIDVFSKNLR 200

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
             DA KVF ++     +   +N ++ G             F +M V   +P   T+ SV+
Sbjct: 201 FEDAYKVFRDSLS--ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258

Query: 299 SACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           +AC      R G  V A+ +K G E    V  A + +Y+ CG + EA  +F+R+    +V
Sbjct: 259 AACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFV 412
           SW  M+S Y + N   SA+  + EM+  G+  +  T  S++++ G   MV     +HA+V
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP---RNIITWNTLINGFLLNGFPV 469
           F +G   +  V+ ALIS Y+K+  I  + Q+F ++     +NI+  N +I  F  +  P 
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPG 435

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + ++ F+ +L   LR DE+++   LS    +  L  GKQ+HGY LK+ L+  +++G+++ 
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           TLY+KCG L+ S ++F  +  KD   W ++IS + ++G  +EA+  F  M D G   PD+
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG-TSPDE 551

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           +T  AVL+ CS    +  G  I    +   G     D  S ++++  + G L  A +V +
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYD 610

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV---LLSNIYAAAGL 706
            +  +    +  +L S  + H     G I  G LL R+       +    +S+I  AA L
Sbjct: 611 -RLPELDPVSCSSLISGYSQH-----GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664

Query: 707 WEEA---ANIRELLKRTGVIKQP 726
            +E+   A +   + + G+  +P
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEP 687


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 226/631 (35%), Positives = 334/631 (52%), Gaps = 57/631 (9%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +N +I      G+ +  + L+R M +L  R D+Y+F  VL  C +      G  +H++V 
Sbjct: 94  WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY-VCDHISYNVMMDGLASVGRVEE 274
            SGF   V V N L++MY  CG   +A +VF+E +   V D +S+N ++      G    
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213

Query: 275 ALIRFRDMLV-ASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           A+  F  M     +RP  ++ V+V+ AC        G QVH  A++SG      V NA +
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTM------------------------------ 360
            MY+ CG ++EA  +F R++ KD+VSWN M                              
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333

Query: 361 -----ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-----EMIHA 410
                I+ YAQR LG  A+  + +M+  G  P+  T  SLL+       +        HA
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393

Query: 411 FVFI-----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFL 463
             +I     N    ++ V NALI  Y+K +  K A  +F  + P  R+++TW  LI G  
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453

Query: 464 LNGFPVQGLQHFSELLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            +G   + L+ FS++L  +  + P+ +T+S AL +CAR+ +LR G+QIH YVL+N   S 
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 513

Query: 522 M-SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           M  + N +I +Y+K GD+D +  VF+ M +++ +SW +L++ Y  HG G+EA+  F  MQ
Sbjct: 514 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 573

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
            VG + PD  TF  VL ACSH+G+VD G   F+ M  D+G +P  +H +CM+DLL RAG 
Sbjct: 574 KVGLV-PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 632

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           LDEA  +I    ++     W AL SAC  + N+ LG   A  LLE E      Y LLSNI
Sbjct: 633 LDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 692

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA A  W++ A IR L+K TG+ K+PGCSW+
Sbjct: 693 YANARCWKDVARIRYLMKNTGIKKRPGCSWV 723



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 228/498 (45%), Gaps = 56/498 (11%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           +I+MY    +   A  V             +N ++     +G +E+ L  +R M     R
Sbjct: 64  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 123

Query: 289 PSELTFVSVMSAC-LCP--RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P   TF  V+ AC   P  R G  VHA    SGFE    V N  ++MY  CG  + A  +
Sbjct: 124 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 183

Query: 346 FARLQEK---DIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLL---AS 398
           F  ++E+   D+VSWN++++ Y Q      A+  +  M + +GIRPD  +  ++L   AS
Sbjct: 184 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 243

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
            G     + +H +   +G+  ++ V NA++  YAK   +++A ++F  M  +++++WN +
Sbjct: 244 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 303

Query: 459 INGF------------------------------LLNGFPVQGLQH-----FSELLMSEL 483
           + G+                              ++ G+  +GL       F ++ +   
Sbjct: 304 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGS 363

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLK-------NNLISKMSLGNAMITLYAKCG 536
            P+  TL   LS CA   +L HGK+ H + +K       N+    + + NA+I +Y+KC 
Sbjct: 364 EPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 423

Query: 537 DLDCSLRVFNMMIEKD--TISWNALISAYAQHGEGKEAVSCFKAM-QDVGRIKPDQATFT 593
               +  +F+++  KD   ++W  LI   AQHGE  EA+  F  M Q    + P+  T +
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
             L AC+  G +  G +I   ++ +          +C++D+  ++G +D A  V ++ H 
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH- 542

Query: 654 QARSDNWWALFSACAAHG 671
           Q    +W +L +    HG
Sbjct: 543 QRNGVSWTSLMTGYGMHG 560



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 156/587 (26%), Positives = 250/587 (42%), Gaps = 92/587 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  +D L L+ ++      +PD Y+    L AC  + +   G  +HA    +G +    V
Sbjct: 105 GFLEDVLQLYRRMQRL-GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFV 163

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            N ++S+Y       + ++VF E++     D+ SW + ++A  + G    A ++F++M  
Sbjct: 164 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT- 222

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                             ED+GI           R D  S  +VL  C   G    G+Q+
Sbjct: 223 ------------------EDLGI-----------RPDAVSLVNVLPACASVGAWSRGKQV 253

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    +SG    V V NA++ MY  CG + +A KVFE  K  V D +S+N M+ G + +G
Sbjct: 254 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYSQIG 311

Query: 271 RVEEAL-----IR------------------------------FRDMLVASLRPSELTFV 295
           R ++AL     IR                              FR M +    P+ +T V
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGFEAYTS-------VSNAAITMYSSCGKIDEACMI 345
           S++S C        G + H  A+K       +       V NA I MYS C     A  +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 346 FARLQEKD--IVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLL---AS 398
           F  +  KD  +V+W  +I   AQ      A+  + +M      + P+ FT    L   A 
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 399 SGFIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            G +     IHA+V  N   + +  V+N LI  Y+K+  +  A  +F NM  RN ++W +
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKN 516
           L+ G+ ++G   + LQ F E+    L PD  T  V L +C+    +  G    +G     
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISA 562
            ++        M+ L ++ G LD ++ +   M  K T + W AL+SA
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 658



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 214/449 (47%), Gaps = 22/449 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A   + G    A+ +F ++     ++PD  SL   L ACA++   + G Q+H
Sbjct: 195 LVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVH 254

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YALR+GL     V N ++ +Y     +    +VF  ++  DV SW   ++  +++G  D
Sbjct: 255 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 314

Query: 141 YACEVFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F+K+ +  + +    ++A+I G  + G     + +FR+M       +  +  S+L
Sbjct: 315 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLL 374

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSC-------LVSVVNALITMYFNCGNVVDACKVFEE 248
           S C  AG L  G++ H    K   +         + V+NALI MY  C +   A  +F+ 
Sbjct: 375 SGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 434

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACL---C 303
                   +++ V++ G A  G   EAL  F  ML     + P+  T    + AC     
Sbjct: 435 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 494

Query: 304 PRVGYQVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
            R G Q+HA  +++ FE A   V+N  I MYS  G +D A ++F  + +++ VSW ++++
Sbjct: 495 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 554

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN---GII 418
            Y     G  A+  + EMQ VG+ PD  TF  +L +     MV+  I+ F  +N   G++
Sbjct: 555 GYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 614

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNM 447
              +    ++   ++  R+ +A ++   M
Sbjct: 615 PGAEHYACMVDLLSRAGRLDEAMELIRGM 643



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 120/256 (46%), Gaps = 13/256 (5%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFL 463
           E+IH  + + G+  +      +IS Y       +A  +   + P    +  WN LI   +
Sbjct: 46  ELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSV 102

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             GF    LQ +  +     RPD YT    L +C  I S R G  +H  V  +     + 
Sbjct: 103 HLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVF 162

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           +GN ++++Y +CG  + + +VF+ M E+   D +SWN++++AY Q G+   A+  F+ M 
Sbjct: 163 VGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT 222

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRA 638
           +   I+PD  +   VL AC+  G    G ++    +    F   ED    + ++D+  + 
Sbjct: 223 EDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLF---EDVFVGNAVVDMYAKC 279

Query: 639 GYLDEAERVINSQHIQ 654
           G ++EA +V     ++
Sbjct: 280 GMMEEANKVFERMKVK 295


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 217/684 (31%), Positives = 370/684 (54%), Gaps = 43/684 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +    L AC  L++  +G ++H  A++ G  +   VAN+I+ +Y    DL   +   
Sbjct: 179 DACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR--- 235

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGI 174
                                       ++FD+MP++ D+  +N+MI+  + NG     +
Sbjct: 236 ----------------------------QLFDRMPEKEDVVSWNSMISAYSSNGQSIEAL 267

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LF EM K  +  + Y+F + L  C D+  ++ G  +H+ V KS +   V V NALI MY
Sbjct: 268 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 327

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G + +A  +F     +  D IS+N M+ G    G   EAL  + +M  A  +P  + 
Sbjct: 328 ARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 385

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            +S+++A         G Q+HA AMK+G ++   V N+ + MY+    +     IF ++ 
Sbjct: 386 VISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS-LLASSGF--IEMVEM 407
           +KD+VSW T+I+ +AQ      A+  + E+Q  GI  D     S LLA SG   I  V+ 
Sbjct: 446 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 505

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH+++   G+ +++ + N ++  Y +   +  A ++F  +  +++++W ++I+ ++ NG 
Sbjct: 506 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 564

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L+ F  +  + + PD  +L   LS+ A +S+L+ GK+IHG++++   + + SL + 
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 624

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YA+CG L+ S  VFN +  KD + W ++I+AY  HG G+ A+  F+ M+D   I P
Sbjct: 625 LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDES-IAP 683

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D   F AVL ACSH+GL+++G R  +SM  +Y   P  +H +C++DLLGRA +L+EA + 
Sbjct: 684 DHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQF 743

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           +    ++  ++ W AL  AC  H N  LG I A  LLE + + P  YVL+SN+Y+A   W
Sbjct: 744 VKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERRW 803

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++   +R  +K +G+ K PGCSWI
Sbjct: 804 KDVEXVRMRMKASGLKKNPGCSWI 827



 Score =  265 bits (676), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 193/645 (29%), Positives = 324/645 (50%), Gaps = 41/645 (6%)

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTT-------FLSA-----CTKMGHVDYACEVFDKM 149
           Y +  +L   K+  SE Q    +  T+       FLS        K G +  A ++FD M
Sbjct: 81  YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 140

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---F 206
           P + +  +NAMI     NG     + L+REM    +  D  +F  +L  C  GLL+   +
Sbjct: 141 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC--GLLKDRRY 198

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G ++H L  K G+  +V V N+++ MY  C ++  A ++F+       D +S+N M+   
Sbjct: 199 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE-DVVSWNSMISAY 257

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
           +S G+  EAL  F +M  ASL P+  TFV+ + AC      + G  +HA  +KS +    
Sbjct: 258 SSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV 317

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+NA I MY+  GK+ EA  IF  + + D +SWN+M+S + Q  L   A+  Y EM+  
Sbjct: 318 FVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 377

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G +PD     S++A+   SG       IHA+   NG+ +++QV N+L+  YAK   +K  
Sbjct: 378 GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYM 437

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF  M  +++++W T+I G   NG   + L+ F E+ +  +  D   +S  L +C+ +
Sbjct: 438 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 497

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             +   K+IH Y+++  L S + L N ++ +Y +CG++D + R+F ++  KD +SW ++I
Sbjct: 498 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 556

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y  +G   EA+  F  M++ G ++PD  +  ++LSA +    +  G  I   ++   G
Sbjct: 557 SCYVHNGLANEALELFHLMKETG-VEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-G 614

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGNLRLGR 677
           F+      S ++D+  R G L+++  V N      R+ +   W ++ +A   HG    GR
Sbjct: 615 FVLEGSLASTLVDMYARCGTLEKSRNVFNF----IRNKDLVLWTSMINAYGMHG---CGR 667

Query: 678 IIAGLL--LEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
               L   +E E   P     ++ +YA   +GL  E     E +K
Sbjct: 668 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 712



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 194/392 (49%), Gaps = 31/392 (7%)

Query: 270 GRVEEALIRFRDMLVASLRPSELT----FVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
           G V EA     D L A+  PS+ +    + SV+  C   +    G QVHA  + S    +
Sbjct: 54  GSVNEAFQSLTD-LFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSN-ALF 111

Query: 323 TSV--SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            SV  S   + MY  CG + +A  +F  +  K I +WN MI  Y        ++  Y EM
Sbjct: 112 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 171

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  GI  D  TF  +L + G ++       +H      G ++ + V+N+++  Y K   +
Sbjct: 172 RVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 231

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             A Q+F  M  + ++++WN++I+ +  NG  ++ L+ F E+  + L P+ YT   AL +
Sbjct: 232 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 291

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C   S ++ G  IH  VLK++    + + NA+I +YA+ G +  +  +F  M + DTISW
Sbjct: 292 CEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISW 351

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG------------- 603
           N+++S + Q+G   EA+  +  M+D G+ KPD     ++++A + +G             
Sbjct: 352 NSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLHGMQIHAYAM 410

Query: 604 --LVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
              +D   ++ +S+V+ Y    +  ++ C+ D
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 442



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 234/526 (44%), Gaps = 54/526 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G Y +AL  + ++  + + KPD+ ++ + +AA A   N   G Q+HAYA+
Sbjct: 352 NSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLHGMQIHAYAM 410

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +   V N+++ +Y     +  +  +F ++ + DV SWTT                
Sbjct: 411 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT---------------- 454

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                          +I G  +NG     + LFRE+    +  D    +S+L  C    L
Sbjct: 455 ---------------IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 499

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNV 261
           +   +++HS + + G S LV + N ++ +Y  CGNV  A ++FE  E K    D +S+  
Sbjct: 500 ISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFK----DVVSWTS 554

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSG 318
           M+      G   EAL  F  M    + P  ++ VS+    ++    + G ++H   ++ G
Sbjct: 555 MISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKG 614

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F    S+++  + MY+ CG ++++  +F  ++ KD+V W +MI+ Y     GR+AI  + 
Sbjct: 615 FVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 674

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            M+   I PD   F ++L   + SG + E    + +  +   +    +    L+    + 
Sbjct: 675 RMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRA 734

Query: 435 ERIKQAYQIFHNMSPRNII-TWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSV 492
             +++AYQ    M        W  L+    ++     G     +LL M    P  Y L  
Sbjct: 735 NHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVS 794

Query: 493 ALSSCAR----ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
            + S  R    +  +R   +  G + KN   S + +GN + T  A+
Sbjct: 795 NVYSAERRWKDVEXVRMRMKASG-LKKNPGCSWIEVGNKVHTFMAR 839



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/501 (21%), Positives = 219/501 (43%), Gaps = 46/501 (9%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           KE ++  N  ++  S +G   +AL LF ++  +  L P+ Y+    L AC +      G 
Sbjct: 244 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA-SLAPNTYTFVAALQACEDSSFIKQGM 302

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +HA  L++       VAN ++++Y     +     +F  + + D  SW +         
Sbjct: 303 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNS--------- 353

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                                 M++G  +NG     +  + EM     + D  +  S+++
Sbjct: 354 ----------------------MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIA 391

Query: 198 V-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN-CGNVVDACKVFEEAKGYVCD 255
               +G    G Q+H+   K+G    + V N+L+ MY   C      C +F++      D
Sbjct: 392 ASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFDKMPDK--D 448

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVH 311
            +S+  ++ G A  G    AL  FR++ +  +    +   S++ AC    L   V  ++H
Sbjct: 449 VVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK-EIH 507

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           +  ++ G      + N  + +Y  CG +D A  +F  ++ KD+VSW +MIS Y    L  
Sbjct: 508 SYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLAN 566

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A+  +  M+  G+ PD  +  S+L+++  +  ++    IH F+   G +    +++ L+
Sbjct: 567 EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 626

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YA+   ++++  +F+ +  ++++ W ++IN + ++G     +  F  +    + PD  
Sbjct: 627 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHI 686

Query: 489 TLSVALSSCARISSLRHGKQI 509
                L +C+    +  G++ 
Sbjct: 687 AFVAVLYACSHSGLMNEGRRF 707


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/534 (36%), Positives = 321/534 (60%), Gaps = 9/534 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GR++H+ + KSG      + N L++MY  CG++ DA +VF+  +    + +S+  M+
Sbjct: 112 LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDR--NIVSWTAMI 169

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
           +   +  +  EA   +  M +A  +P ++TFVS+++A   P   +VG +VH +  K+G E
Sbjct: 170 EAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLE 229

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  + + MY+ CG I +A +IF +L EK++V+W  +I+ YAQ+     A+    +M
Sbjct: 230 LEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM 289

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q   + P++ T+ S+L    +   +E  + +H ++  +G    I V NALI+ Y K   +
Sbjct: 290 QQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGL 349

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           K+A ++F ++  R+++TW  ++ G+   GF  + +  F  +    ++PD+ T + AL+SC
Sbjct: 350 KEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSC 409

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +  + L+ GK IH  ++       + L +A++++YAKCG +D +  VFN M E++ ++W 
Sbjct: 410 SSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWT 469

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I+  AQHG  +EA+  F+ M+  G IKPD+ TFT+VLSAC+H GLV++G + F SM  
Sbjct: 470 AMITGCAQHGRCREALEYFEQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 528

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           DYG  P  +H SC +DLLGRAG+L+EAE VI +   Q     W AL SAC  H ++  G 
Sbjct: 529 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGE 588

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  +L+ + D    YV LSNIYAAAG +E+A  +R+++++  V+K+PG SWI
Sbjct: 589 RAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 642



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 156/617 (25%), Positives = 286/617 (46%), Gaps = 49/617 (7%)

Query: 10  IAGNSNTSKELLLKLNISLANLSRSGHYQDALHLF-VQIHSSHKLKPDIYSLSTTLAACA 68
           + GN+   K   L  +  ++ L + G  ++AL +    I    ++  D++     L  CA
Sbjct: 50  LPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFR--GLLQECA 107

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
            LR+   G ++HA  L++G++   ++ NT+LS+Y     L   +R               
Sbjct: 108 RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARR--------------- 152

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
                           VFD + DR++  + AMI               +  M     + D
Sbjct: 153 ----------------VFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196

Query: 189 NYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             +F S+L +  +  LL+ G+++H  + K+G      V  +L+ MY  CG++  A  +F+
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           +      + +++ +++ G A  G+V+ AL     M  A + P+++T+ S++  C  P   
Sbjct: 257 KLPEK--NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G +VH   ++SG+     V NA ITMY  CG + EA  +F  L  +D+V+W  M++ Y
Sbjct: 315 EHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGY 374

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
           AQ      AI  +  MQ  GI+PD+ TF S L   +S  F++  + IH  +   G   ++
Sbjct: 375 AQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDV 434

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            + +AL+S YAK   +  A  +F+ MS RN++ W  +I G   +G   + L++F ++   
Sbjct: 435 YLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQ 494

Query: 482 ELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
            ++PD+ T +  LS+C  +  +  G K      L   +   +   +  + L  + G L+ 
Sbjct: 495 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 554

Query: 541 SLRV-FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQATFTAVLSA 598
           +  V   M  +     W AL+SA   H + +      +A ++V ++ P D   + A+ + 
Sbjct: 555 AENVILTMPFQPGPSVWGALLSACRIHSDVERGE---RAAENVLKLDPDDDGAYVALSNI 611

Query: 599 CSHAGLVDDGTRIFDSM 615
            + AG  +D  ++   M
Sbjct: 612 YAAAGRYEDAEKVRQVM 628


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 204/610 (33%), Positives = 338/610 (55%), Gaps = 11/610 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRD 188
           L    K G +  +  +FDKM  RD   +  +I G          + LF  M  +  ++RD
Sbjct: 97  LKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRD 156

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +  +  L  C  G+ + FG  LH    KSG    V V +ALI MY   G +   C+VF+
Sbjct: 157 QFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFK 216

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           +      + +S+  ++ GL   G   EAL+ F +M ++ +     TF   + A     + 
Sbjct: 217 KMTKR--NVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLL 274

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H Q +K GF+  + V N   TMY+ CGK D    +F +++  D+VSW T+I+TY
Sbjct: 275 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTY 334

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNI 421
            Q+     A+ A+  M+   + P+++TF +++++   + +    E IH  V   G++  +
Sbjct: 335 VQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDAL 394

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+N++++ Y+K+  +K A  +FH ++ ++II+W+T+I  +   G+  +   + S +   
Sbjct: 395 SVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRRE 454

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P+E+ LS  LS C  ++ L  GKQ+H +VL   +  +  + +A+I++Y+KCG ++ +
Sbjct: 455 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEA 514

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++FN M   + ISW A+I+ YA+HG  +EA++ F+ +  VG +KPD  TF  VL+ACSH
Sbjct: 515 SKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVG-LKPDYVTFIGVLTACSH 573

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+VD G   F  M N+Y   P+++H  C++DLL RAG L EAE +I S         W 
Sbjct: 574 AGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWS 633

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  +C  HG++  GR  A  LL  + +    ++ L+NIYAA G W+EAA+IR+L+K  G
Sbjct: 634 TLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKG 693

Query: 722 VIKQPGCSWI 731
           VIK+ G SW+
Sbjct: 694 VIKERGWSWV 703



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 261/542 (48%), Gaps = 48/542 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF  +     L+ D + +S  L AC    N  FG  LH +++++GL     V++ +
Sbjct: 139 EALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSAL 198

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + +Y                                K+G ++  C VF KM  R++  + 
Sbjct: 199 IDMY-------------------------------MKVGKIEQGCRVFKKMTKRNVVSWT 227

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS 217
           A+I G    GY    +  F EM    V  D+++FA  L    D+ LL  G+ +H+   K 
Sbjct: 228 AIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 287

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V+N L TMY  CG      ++FE+ K  + D +S+  ++      G  E A+ 
Sbjct: 288 GFDESSFVINTLATMYNKCGKADYVMRLFEKMK--MPDVVSWTTLITTYVQKGEEEHAVE 345

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F+ M  +++ P++ TF +V+SAC      + G Q+H   ++ G     SV+N+ +T+YS
Sbjct: 346 AFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYS 405

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
             G +  A ++F  +  KDI+SW+T+I+ Y+Q    + A      M+  G +P+EF   S
Sbjct: 406 KSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 465

Query: 395 LLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L+  G + ++E    +HA V   GI     V +ALIS Y+K   +++A +IF+ M   N
Sbjct: 466 VLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINN 525

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           II+W  +ING+  +G+  + +  F ++    L+PD  T    L++C+    +  G   + 
Sbjct: 526 IISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLG--FYY 583

Query: 512 YVLKNNLI----SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
           ++L  N      SK   G  +I L  + G L +    + +M    D + W+ L+ +   H
Sbjct: 584 FMLMTNEYQISPSKEHYG-CIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVH 642

Query: 567 GE 568
           G+
Sbjct: 643 GD 644



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 207/415 (49%), Gaps = 10/415 (2%)

Query: 290 SELTFVSVMSACLCPRVGYQV-HAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFA 347
           S LT+ S  +A  C  +  Q    Q  ++ +  +  +  N+ +      G++ ++  +F 
Sbjct: 55  SPLTYSSPGTATECRELIQQAKQEQLAQNAYSVHNMLELNSELKQLVKQGQLCKSRYMFD 114

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGF---IE 403
           ++  +D +SW T+I+ Y   +    A++ +  M    G++ D+F     L + G    I 
Sbjct: 115 KMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNIC 174

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             E++H F   +G+I ++ VS+ALI  Y K  +I+Q  ++F  M+ RN+++W  +I G +
Sbjct: 175 FGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLV 234

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             G+ ++ L +FSE+ +S++  D +T ++AL + A  S L HGK IH   +K        
Sbjct: 235 HAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSF 294

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + N + T+Y KCG  D  +R+F  M   D +SW  LI+ Y Q GE + AV  FK M+   
Sbjct: 295 VINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRK-S 353

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            + P++ TF AV+SAC++  +   G +I   ++   G + A    + ++ L  ++G L  
Sbjct: 354 NVSPNKYTFAAVISACANLAIAKWGEQIHGHVLR-LGLVDALSVANSIVTLYSKSGLLKS 412

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           A  V +   I  +    W+   A  + G            + RE  KP+ + L S
Sbjct: 413 ASLVFHG--ITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 465



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 49/480 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A L  +G+  +AL  F ++  S K+  D ++ +  L A A+      G  +H   ++ G
Sbjct: 230 IAGLVHAGYNMEALLYFSEMWIS-KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQG 288

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V NT+ ++Y        V R+F +++ PDV SWTT ++   + G  ++A E   
Sbjct: 289 FDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEA-- 346

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                                        F+ M K +V  + Y+FA+V+S C +  + ++
Sbjct: 347 -----------------------------FKRMRKSNVSPNKYTFAAVISACANLAIAKW 377

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H  V + G    +SV N+++T+Y   G +  A  VF        D IS++ ++   
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRK--DIISWSTIIAVY 435

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  G  +EA      M     +P+E    SV+S C        G QVHA  +  G +   
Sbjct: 436 SQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEA 495

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I+MYS CG ++EA  IF  ++  +I+SW  MI+ YA+    + AI  + ++ SV
Sbjct: 496 MVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSV 555

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERI 437
           G++PD  TF  +L +     MV++   F +   +    Q+S +      +I    +  R+
Sbjct: 556 GLKPDYVTFIGVLTACSHAGMVDL--GFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRL 613

Query: 438 KQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            +A  +  +M    + + W+TL+    ++G   +G     +LL   L P+     +AL++
Sbjct: 614 SEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLL--RLDPNSAGTHIALAN 671


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/617 (33%), Positives = 336/617 (54%), Gaps = 9/617 (1%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           ++PDV      L+   K G +  A ++FD+MP +++  + ++++G T NG  +  + +F 
Sbjct: 44  ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M +  V  ++++  + L  C D G L  G Q+HSL  ++GF+    + + LI MY  CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A +VF+       D + Y  ++      G  E A      ML   L+P+E T  ++
Sbjct: 164 SLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221

Query: 298 MSACLCPRV-GYQVHAQAMKS-GFEAYTSVSNAA-ITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  PRV G Q+H   +K  G  + +  S+ A I  YS  G+   A  +F  L  K++
Sbjct: 222 LTAC--PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           VSW +M+  Y +      A+  + +M S G+ P+EF    +L + G I +   +H     
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIK 339

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           + +IT+I+VSNAL+S Y +   +++   + + +   ++++W T I+    NGF  + +  
Sbjct: 340 HDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIAL 399

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
             ++      P+ Y  S  LSSCA ++SL  G Q H   LK    S++  GNA+I +Y+K
Sbjct: 400 LCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSK 459

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG +  +   F++M   D  SWN+LI  +AQHG+  +A+  F  M+  G IKPD +TF  
Sbjct: 460 CGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG-IKPDDSTFLG 518

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           VL  C+H+G+V++G   F  M++ Y F PA  H +CM+D+LGR G  DEA R+IN    +
Sbjct: 519 VLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFE 578

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
             +  W  L ++C  H NL +G++ A  L+E      + YVL+SNIYA  G WE+A  +R
Sbjct: 579 PDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVR 638

Query: 715 ELLKRTGVIKQPGCSWI 731
             +  TGV K  GCSWI
Sbjct: 639 RRMDETGVKKDAGCSWI 655



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 250/546 (45%), Gaps = 44/546 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +R+G  + AL +F  +  S  + P+ ++ +  L ACA+L     G Q+H+ A+RAG
Sbjct: 86  MSGYTRNGRPEAALAMFADMVES-GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG 144

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + + ++ +Y     L + K VF  + +PDV  +T+ +SA  + G  + A E   
Sbjct: 145 FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE--- 201

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                      A+I                 +M K  ++ + ++  ++L+ C   L   G
Sbjct: 202 -----------ALI-----------------QMLKQGLKPNEHTMTTILTACPRVL---G 230

Query: 208 RQLHS-LVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +Q+H  L+ K G  S  V    ALI  Y   G    A  VF+    +  + +S+  MM  
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL--HCKNVVSWCSMMQL 288

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
               GR+EEAL  F DM+   + P+E     V+ AC    +G Q+H  A+K        V
Sbjct: 289 YIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRV 348

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA ++MY   G ++E   +  +++  D+VSW T IS   Q   G  AI    +M S G 
Sbjct: 349 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 408

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P+ + F S+L+S   +  ++     H      G  + I   NALI+ Y+K  ++  A  
Sbjct: 409 TPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 468

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F  M   ++ +WN+LI+G   +G   + L+ FS++  + ++PD+ T    L  C     
Sbjct: 469 AFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGM 528

Query: 503 LRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALI 560
           +  G+     ++   +     S    MI +  + G  D +LR+ N M  E D + W  L+
Sbjct: 529 VEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 588

Query: 561 SAYAQH 566
           ++   H
Sbjct: 589 ASCKLH 594


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 218/684 (31%), Positives = 368/684 (53%), Gaps = 43/684 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +    L AC  L++   G ++H  A++ G  +   VAN+I+ +Y    DL   +   
Sbjct: 215 DACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGAR--- 271

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGI 174
                                       ++FD+MP++ D+  +N+MI+  + NG     +
Sbjct: 272 ----------------------------QLFDRMPEKEDVVSWNSMISAYSSNGQSIEAL 303

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LF EM K  +  + Y+F + L  C D+  ++ G  +H+ V KS +   V V NALI MY
Sbjct: 304 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMY 363

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G + +A  +F     +  D IS+N M+ G    G   EAL  + +M  A  +P  + 
Sbjct: 364 ARFGKMGEAANIFYNMDDW--DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 421

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            +S+++A         G Q+HA AMK+G ++   V N+ + MY+    +     IF ++ 
Sbjct: 422 VISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS-LLASSGF--IEMVEM 407
           +KD+VSW T+I+ +AQ      A+  + E+Q  GI  D     S LLA SG   I  V+ 
Sbjct: 482 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 541

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH+++   G+ +++ + N ++  Y +   +  A ++F  +  +++++W ++I+ ++ NG 
Sbjct: 542 IHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 600

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L+ F  +  + + PD  +L   LS+ A +S+L+ GK+IHG++++   + + SL + 
Sbjct: 601 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLAST 660

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YA+CG L+ S  VFN +  KD + W ++I+AY  HG G+ A+  F+ M+D   I P
Sbjct: 661 LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDES-IAP 719

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D   F AVL ACSH+GL+++G R  +SM  +Y   P  +H  C++DLLGRA +L+EA + 
Sbjct: 720 DHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQF 779

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           +    ++  ++ W AL  AC  H N  LG I A  LLE + + P  YVL+SN+YAA   W
Sbjct: 780 VKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERRW 839

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++   +R  +K +G+ K PGCSWI
Sbjct: 840 KDVEEVRMRMKASGLKKNPGCSWI 863



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 193/645 (29%), Positives = 323/645 (50%), Gaps = 41/645 (6%)

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTT-------FLSA-----CTKMGHVDYACEVFDKM 149
           Y +  +L   K+  SE Q    +  T+       FLS        K G +  A ++FD M
Sbjct: 117 YSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGM 176

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---F 206
           P + +  +NAMI     NG     + L+REM    +  D  +F  +L  C  GLL+    
Sbjct: 177 PHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKAC--GLLKDRRC 234

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G ++H L  K G+  +V V N+++ MY  C ++  A ++F+       D +S+N M+   
Sbjct: 235 GAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKE-DVVSWNSMISAY 293

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
           +S G+  EAL  F +M  ASL P+  TFV+ + AC      + G  +HA  +KS +    
Sbjct: 294 SSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINV 353

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+NA I MY+  GK+ EA  IF  + + D +SWN+M+S + Q  L   A+  Y EM+  
Sbjct: 354 FVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 413

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G +PD     S++A+   SG       IHA+   NG+ +++QV N+L+  YAK   +K  
Sbjct: 414 GQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYM 473

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF  M  +++++W T+I G   NG   + L+ F E+ +  +  D   +S  L +C+ +
Sbjct: 474 DCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGL 533

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             +   K+IH Y+++  L S + L N ++ +Y +CG++D + R+F ++  KD +SW ++I
Sbjct: 534 KLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMI 592

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y  +G   EA+  F  M++ G ++PD  +  ++LSA +    +  G  I   ++   G
Sbjct: 593 SCYVHNGLANEALELFHLMKETG-VEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-G 650

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGNLRLGR 677
           F+      S ++D+  R G L+++  V N      R+ +   W ++ +A   HG    GR
Sbjct: 651 FVLEGSLASTLVDMYARCGTLEKSRNVFNF----IRNKDLVLWTSMINAYGMHG---CGR 703

Query: 678 IIAGLL--LEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
               L   +E E   P     ++ +YA   +GL  E     E +K
Sbjct: 704 AAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMK 748



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 194/392 (49%), Gaps = 31/392 (7%)

Query: 270 GRVEEALIRFRDMLVASLRPSELT----FVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
           G V EA     D L A+  PS+ +    + SV+  C   +    G QVHA  + S    +
Sbjct: 90  GSVNEAFQSLTD-LFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSN-ALF 147

Query: 323 TSV--SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            SV  S   + MY  CG + +A  +F  +  K I +WN MI  Y        ++  Y EM
Sbjct: 148 NSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREM 207

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  GI  D  TF  +L + G ++       +H      G ++ + V+N+++  Y K   +
Sbjct: 208 RVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDL 267

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             A Q+F  M  + ++++WN++I+ +  NG  ++ L+ F E+  + L P+ YT   AL +
Sbjct: 268 NGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQA 327

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C   S ++ G  IH  VLK++    + + NA+I +YA+ G +  +  +F  M + DTISW
Sbjct: 328 CEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISW 387

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF---- 612
           N+++S + Q+G   EA+  +  M+D G+ KPD     ++++A + +G   +G +I     
Sbjct: 388 NSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLNGMQIHAYAM 446

Query: 613 -----------DSMVNDYGFIPAEDHLSCMLD 633
                      +S+V+ Y    +  ++ C+ D
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFD 478



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 181/378 (47%), Gaps = 43/378 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G Y +AL  + ++  + + KPD+ ++ + +AA A   N   G Q+HAYA+
Sbjct: 388 NSMLSGFVQNGLYHEALQFYHEMRDAGQ-KPDLVAVISIIAASARSGNTLNGMQIHAYAM 446

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +   V N+++ +Y     +  +  +F ++ + DV SWTT                
Sbjct: 447 KNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTT---------------- 490

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                          +I G  +NG     + LFRE+    +  D    +S+L  C    L
Sbjct: 491 ---------------IIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKL 535

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNV 261
           +   +++HS + + G S LV + N ++ +Y  CGNV  A ++FE  E K    D +S+  
Sbjct: 536 ISSVKEIHSYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFK----DVVSWTS 590

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSG 318
           M+      G   EAL  F  M    + P  ++ VS+    ++    + G ++H   ++ G
Sbjct: 591 MISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKG 650

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F    S+++  + MY+ CG ++++  +F  ++ KD+V W +MI+ Y     GR+AI  + 
Sbjct: 651 FVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFR 710

Query: 379 EMQSVGIRPDEFTFGSLL 396
            M+   I PD   F ++L
Sbjct: 711 RMEDESIAPDHIAFVAVL 728



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/501 (21%), Positives = 219/501 (43%), Gaps = 46/501 (9%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           KE ++  N  ++  S +G   +AL LF ++  +  L P+ Y+    L AC +      G 
Sbjct: 280 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKA-SLAPNTYTFVAALQACEDSSFIKQGM 338

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +HA  L++       VAN ++++Y     +     +F  + + D  SW +         
Sbjct: 339 FIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNS--------- 389

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                                 M++G  +NG     +  + EM     + D  +  S+++
Sbjct: 390 ----------------------MLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIA 427

Query: 198 V-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN-CGNVVDACKVFEEAKGYVCD 255
               +G    G Q+H+   K+G    + V N+L+ MY   C      C +F++      D
Sbjct: 428 ASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDC-IFDKMPDK--D 484

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVH 311
            +S+  ++ G A  G    AL  FR++ +  +    +   S++ AC    L   V  ++H
Sbjct: 485 VVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK-EIH 543

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           +  ++ G      + N  + +Y  CG +D A  +F  ++ KD+VSW +MIS Y    L  
Sbjct: 544 SYIIRKGLSDLV-LQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLAN 602

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A+  +  M+  G+ PD  +  S+L+++  +  ++    IH F+   G +    +++ L+
Sbjct: 603 EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLV 662

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YA+   ++++  +F+ +  ++++ W ++IN + ++G     +  F  +    + PD  
Sbjct: 663 DMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHI 722

Query: 489 TLSVALSSCARISSLRHGKQI 509
                L +C+    +  G++ 
Sbjct: 723 AFVAVLYACSHSGLMNEGRRF 743


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/730 (30%), Positives = 388/730 (53%), Gaps = 50/730 (6%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N + E L    I   ++ R  H    L L  Q ++     PD+ + S  L +C   RN  
Sbjct: 6   NPNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAP----PDLTTYSILLKSCIRFRNFQ 61

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +H   +++GL+    V NT++SLY    D  + + +F  + N              
Sbjct: 62  LGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNK------------- 108

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                            RDL  ++AM++    N  E   I  F +M +L    + Y FA+
Sbjct: 109 -----------------RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFN-CGNVVDACKVFEEAKG 251
           V+  C +A     G  ++  V K+G+    V V   LI M+    G++  A KVF++   
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGY 308
              + +++ +M+   A +G   +A+  F DM ++   P   T+ SV+SAC       +G 
Sbjct: 212 R--NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGK 269

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYA 365
           Q+H++ ++ G      V  + + MY+ C   G +D++  +F ++ E +++SW  +I+ Y 
Sbjct: 270 QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYV 329

Query: 366 QR-NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNI 421
           Q     + AI  + +M S  IRP+ F+F S+L + G +      E ++++    GI +  
Sbjct: 330 QSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVN 389

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V N+LIS YA++ R++ A + F  +  +N++++N +++G+  N    +    F+E+  +
Sbjct: 390 CVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT 449

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            +    +T +  LS  A I ++  G+QIHG +LK    S   + NA+I++Y++CG+++ +
Sbjct: 450 GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 509

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            +VFN M +++ ISW ++I+ +A+HG    A+  F  M + G  KP++ T+ AVLSACSH
Sbjct: 510 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSH 568

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            G++ +G + F+SM  ++G +P  +H +CM+DLLGR+G L EA   INS  + A +  W 
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HGN  LGR  A ++LE+E D P+ Y+LLSN++A+AG W++   IR+ +K   
Sbjct: 629 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 688

Query: 722 VIKQPGCSWI 731
           +IK+ GCSWI
Sbjct: 689 LIKEAGCSWI 698



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 192/430 (44%), Gaps = 61/430 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++A+ LF ++ S H ++P+ +S S+ L AC NL +   G Q+++YA++ G+ +   V N+
Sbjct: 336 KEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 394

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++S+Y                                + G ++ A + FD + +++L  Y
Sbjct: 395 LISMY-------------------------------ARSGRMEDARKAFDILFEKNLVSY 423

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTK 216
           NA++ G  +N   +    LF E+    +    ++FAS+LS     G +  G Q+H  + K
Sbjct: 424 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 483

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G+     + NALI+MY  CGN+  A +VF E +    + IS+  M+ G A  G    AL
Sbjct: 484 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRAL 541

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM--KSGFEAYTSVSNAAI 330
             F  ML    +P+E+T+V+V+SA  C  VG     Q H  +M  + G           +
Sbjct: 542 EMFHKMLETGTKPNEITYVAVLSA--CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 599

Query: 331 TMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQSVGIR 386
            +    G + EA      +    D + W T++     +    LGR A    LE +     
Sbjct: 600 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE----- 654

Query: 387 PDE----FTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISAYAKNERI 437
           PD+        +L AS+G  + V  I   +    +I       I+V N +   +      
Sbjct: 655 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 714

Query: 438 KQAYQIFHNM 447
            QA+QI+  +
Sbjct: 715 PQAWQIYQEL 724


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/726 (30%), Positives = 373/726 (51%), Gaps = 49/726 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           ++  +   N  +     SG Y +A+ L+ ++     +  D  +  + L AC  L  +  G
Sbjct: 106 TERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVL-GVAIDACTFPSVLKACGALGESRLG 164

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI--QNPDVYSWTTFLSACT 134
            ++H  A++ G   +  V N ++++Y    DL   + +F  I  +  D  SW + +SA  
Sbjct: 165 AEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV 224

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G                          C E       + LFR M ++ V  + Y+F +
Sbjct: 225 TEGK-------------------------CLE------ALSLFRRMQEVGVASNTYTFVA 253

Query: 195 VLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  V D   ++ G  +H    KS     V V NALI MY  CG + DA +VF  A    
Sbjct: 254 ALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVF--ASMLC 311

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----Y 308
            D++S+N ++ GL       +AL  FRDM  ++ +P +++ +++++A    R G      
Sbjct: 312 RDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAAS--GRSGNLLNGK 369

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           +VHA A+++G ++   + N  I MY+ C  +      F  + EKD++SW T+I+ YAQ  
Sbjct: 370 EVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNE 429

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIE--MVEMIHAFVFINGIITNIQVSN 425
               AI  + ++Q  G+  D    GS+L A SG      +  IH +VF   +  +I + N
Sbjct: 430 CHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQN 488

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           A+++ Y +      A + F ++  ++I++W ++I   + NG PV+ L+ F  L  + ++P
Sbjct: 489 AIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQP 548

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   +  ALS+ A +SSL+ GK+IHG++++     +  + ++++ +YA CG ++ S ++F
Sbjct: 549 DSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMF 608

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + + ++D I W ++I+A   HG G EA++ FK M D   I PD  TF A+L ACSH+GL+
Sbjct: 609 HSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVI-PDHITFLALLYACSHSGLM 667

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            +G R F+ M   Y   P  +H +CM+DLL R+  L+EA + + S  I+  S+ W AL  
Sbjct: 668 VEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLG 727

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           AC  H N  LG + A  LL+ +      Y L+SNI+AA G W +   +R  +K  G+ K 
Sbjct: 728 ACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKN 787

Query: 726 PGCSWI 731
           PGCSWI
Sbjct: 788 PGCSWI 793



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 189/669 (28%), Positives = 320/669 (47%), Gaps = 51/669 (7%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           S  L  C  ++    G QLHA  L++ L A+  +A  +L +Y+                 
Sbjct: 50  SLLLDLCVAVKALPQGQQLHARLLKSHLSAF--LATKLLHMYE----------------- 90

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
                         K G +  A +VFD+M +R +  +NAM+     +G     I L++EM
Sbjct: 91  --------------KCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEM 136

Query: 181 HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L V  D  +F SVL  C A G    G ++H +  K GF   V V NALI MY  CG++
Sbjct: 137 RVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDL 196

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A  +F+       D +S+N ++    + G+  EAL  FR M    +  +  TFV+ + 
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQ 256

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
               P   ++G  +H  A+KS   A   V+NA I MY+ CG++++A  +FA +  +D VS
Sbjct: 257 GVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVS 316

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           WNT++S   Q  L R A+  + +MQ+   +PD+ +  +L+A+SG    +   + +HA+  
Sbjct: 317 WNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAI 376

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            NG+ +N+Q+ N LI  YAK   +K     F  M  +++I+W T+I G+  N   ++ + 
Sbjct: 377 RNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAIN 436

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++ +  +  D   +   L +C+ + S    ++IHGYV K +L   M L NA++ +Y 
Sbjct: 437 LFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIM-LQNAIVNVYG 495

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           + G  D + R F  +  KD +SW ++I+    +G   EA+  F +++    I+PD     
Sbjct: 496 EVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQT-NIQPDSIAII 554

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           + LSA ++   +  G  I   ++   GF       S ++D+    G ++ + ++ +S   
Sbjct: 555 SALSATANLSSLKKGKEIHGFLIRK-GFFLEGPIASSLVDMYACCGTVENSRKMFHSVK- 612

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIYAA--AGLWEE 709
           Q     W ++ +A   HG    G     L   +  E   P     L+ +YA   +GL  E
Sbjct: 613 QRDLILWTSMINANGMHG---CGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVE 669

Query: 710 AANIRELLK 718
                E++K
Sbjct: 670 GKRFFEIMK 678



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 167/333 (50%), Gaps = 13/333 (3%)

Query: 289 PSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           PS L     +   LC  V     G Q+HA+ +KS   A+  ++   + MY  CG + +A 
Sbjct: 42  PSRLEHAHSLLLDLCVAVKALPQGQQLHARLLKSHLSAF--LATKLLHMYEKCGSLKDAV 99

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F  + E+ I +WN M+  +        AI  Y EM+ +G+  D  TF S+L + G + 
Sbjct: 100 KVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALG 159

Query: 404 MVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN--MSPRNIITWNTL 458
              +   IH      G    + V NALI+ Y K   +  A  +F    M   + ++WN++
Sbjct: 160 ESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSI 219

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+  +  G  ++ L  F  +    +  + YT   AL      S ++ G  IHG  LK+N 
Sbjct: 220 ISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNH 279

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            + + + NA+I +YAKCG ++ + RVF  M+ +D +SWN L+S   Q+   ++A++ F+ 
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRD 339

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           MQ+  + KPDQ +   +++A   +G + +G  +
Sbjct: 340 MQNSAQ-KPDQVSVLNLIAASGRSGNLLNGKEV 371


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/662 (33%), Positives = 364/662 (54%), Gaps = 20/662 (3%)

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS----EIQNPDVYSWTTFLSACTKMG 137
           + LR  ++   +VA   L  +K AR   S  RV+S     + +  +      LS   + G
Sbjct: 98  HELRIPVEDDAYVALIRLCEWKRARKEGS--RVYSYVSISMSHLSLQLGNALLSMFVRFG 155

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           ++  A  VF +M  R+L  +N ++ G  + G  D  + L+  M  + V+ D Y+F  VL 
Sbjct: 156 NLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLR 215

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C  G+  L  GR++H  V + GF   V VVNALITMY  CG+V  A  VF++      D
Sbjct: 216 TC-GGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNR--D 272

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            IS+N M+ G    G   E L  F  M+   + P  +T  SV++AC      R+G Q+H 
Sbjct: 273 RISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +++ F    S+ N+ I MYSS G I+EA  +F+R + +D+VSW  MIS Y    + + 
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A+  Y  M++ GI PDE T   +L++   +  ++M   +H      G+++   V+N+LI 
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK + I +A +IFH+   +NI++W ++I G  +N    + L  F E++   L+P+  T
Sbjct: 453 MYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMI-RRLKPNSVT 511

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   LS+CARI +L  GK+IH + L+  +     + NA++ +Y +CG ++ + + F   +
Sbjct: 512 LVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQF-FSV 570

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           + +  SWN L++ YA+ G+G  A   F+ M +   + P++ TF ++L ACS +G+V +G 
Sbjct: 571 DHEVTSWNILLTGYAERGKGAHATELFQRMVE-SNVSPNEVTFISILCACSRSGMVAEGL 629

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
             F+SM   Y  +P   H +C++DLLGR+G L+EA   I    ++     W AL ++C  
Sbjct: 630 EYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRI 689

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H ++ LG + A  + + +      Y+LLSN+YA  G W++ A +R+++++ G+I  PGCS
Sbjct: 690 HHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCS 749

Query: 730 WI 731
           W+
Sbjct: 750 WV 751


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/683 (32%), Positives = 348/683 (50%), Gaps = 41/683 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  SL+  L AC  L     G Q+H   ++ G                            
Sbjct: 180 DRASLAVVLKACGALEECDMGVQVHGLVVKFGF--------------------------- 212

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
               + DV + +  L    K   +D +  VF ++P+++   ++AMI GC +N     G+ 
Sbjct: 213 ----DCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLE 268

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF+EM  + V      +AS+   C A   L  G++LHS   KS F   + V  A + MY 
Sbjct: 269 LFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYA 328

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG + DA KV        C   SYN ++ G A   R  +AL  F+ +L   L   E+T 
Sbjct: 329 KCGRMADAQKVLSSMPK--CSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
              ++AC   R    G QVH  A+KS   +   V+NA + MY  C  + EA  +F  ++ 
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMER 446

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           +D VSWN +I+   Q       +  +  M    + PD+FT+GS+L +    + +     I
Sbjct: 447 RDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEI 506

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +  +G+  +  V  AL+  Y K   I++A +I      + +++WN +I+GF L    
Sbjct: 507 HTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQS 566

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
               + FS +L   + PD +T +  L +CA ++++  GKQIH  ++K  L S + + + +
Sbjct: 567 EDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTL 626

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +Y+KCG++  S  +F     +D ++WNA++  YA HG G+EA+  F++MQ V  +KP+
Sbjct: 627 VDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLV-NVKPN 685

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            ATF +VL AC+H GLVD G   FD M+++YG  P  +H SCM+D+LGR+G +DEA  ++
Sbjct: 686 HATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLV 745

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                +A +  W  L S C  HGN+ +       LL+ +    S  VLLSNIYA AG+W 
Sbjct: 746 QKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWG 805

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
             + +R++++   + K+PGCSWI
Sbjct: 806 NVSEMRKMMRHNKLKKEPGCSWI 828



 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 173/629 (27%), Positives = 316/629 (50%), Gaps = 26/629 (4%)

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           I + S     C+   +   G Q HA  +  G +    V+N ++ +Y     L    +VF 
Sbjct: 49  IRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFD 108

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           ++   DV S+ + +S     G +D A + F +MP+RD+  +N++I+G  +NG     I +
Sbjct: 109 KMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDV 168

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMY 233
           F EM +  V  D  S A VL  C  G LE    G Q+H LV K GF C V   +AL+ MY
Sbjct: 169 FLEMGRCGVGFDRASLAVVLKAC--GALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMY 226

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C  + D+  VF E      + +S++ M+ G     R  E L  F++M    +  S+  
Sbjct: 227 AKCKRLDDSLSVFSELPEK--NWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSI 284

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + S+  +C      R+G ++H+ A+KS F +   V  A + MY+ CG++ +A  + + + 
Sbjct: 285 YASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMP 344

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVE--M 407
           +  + S+N +I  YA+ + G  A+ ++  +   G+  DE T  G+L A +     +E   
Sbjct: 345 KCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQ 404

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H     +  ++NI V+NA++  Y K + + +A  +F  M  R+ ++WN +I     NG 
Sbjct: 405 VHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGN 464

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L HF+ ++ S + PD++T    L +CA   +L  G +IH  ++K+ +     +G A
Sbjct: 465 EEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAA 524

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y KCG ++ + ++ +   +K  +SWNA+IS ++   + ++A   F  M ++G + P
Sbjct: 525 LVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMG-VNP 583

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEA-- 644
           D  T+ AVL  C++   V  G +I   ++     + ++ ++ S ++D+  + G + ++  
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQIIKQE--LQSDVYICSTLVDMYSKCGNMQDSQL 641

Query: 645 --ERVINSQHIQARSDNWWALFSACAAHG 671
             E+  N   +      W A+    A HG
Sbjct: 642 MFEKAPNRDFV-----TWNAMLCGYAHHG 665



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/493 (25%), Positives = 225/493 (45%), Gaps = 47/493 (9%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S+  K  L   N  +   +RS     AL  F Q+     L  D  +LS  L ACA++R  
Sbjct: 341 SSMPKCSLQSYNAIIVGYARSDRGFQALKSF-QLLLKTGLGFDEITLSGALNACASIRGD 399

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+H  A+++   +   VAN IL +Y   + L     +F  ++  D  SW   ++A 
Sbjct: 400 LEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAA- 458

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                         C +NG E+  +  F  M    +  D++++ 
Sbjct: 459 ------------------------------CEQNGNEEETLAHFASMIHSRMEPDDFTYG 488

Query: 194 SVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           SVL  C AG   L  G ++H+ + KSG      V  AL+ MY  CG +  A K+ +  + 
Sbjct: 489 SVLKAC-AGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGY 308
                +S+N ++ G + + + E+A   F  ML   + P   T+ +V+  C       +G 
Sbjct: 548 KT--MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGK 605

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HAQ +K   ++   + +  + MYS CG + ++ ++F +   +D V+WN M+  YA   
Sbjct: 606 QIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHG 665

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAF-VFIN--GIITNIQVS 424
           LG  A+  +  MQ V ++P+  TF S+L +   + +V+  +H F V ++  G+    +  
Sbjct: 666 LGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHY 725

Query: 425 NALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           + ++    ++ RI +A  +   M    + + W  L++   ++G  V+  +  +  L+ +L
Sbjct: 726 SCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHG-NVEVAEKATRALL-QL 783

Query: 484 RPDEYTLSVALSS 496
            P + +  V LS+
Sbjct: 784 DPQDSSACVLLSN 796



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 41/223 (18%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
           +  T ++ ++  N  ++  S     +DA H F        + PD ++ +  L  CANL  
Sbjct: 542 HDRTEQKTMVSWNAIISGFSLLQQSEDA-HKFFSRMLEMGVNPDNFTYAAVLDTCANLAT 600

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
              G Q+HA  ++  L++  ++ +T++ +Y    ++   + +F +  N D  +W      
Sbjct: 601 VGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTW------ 654

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
                                    NAM+ G   +G  +  + LF  M  ++V+ ++ +F
Sbjct: 655 -------------------------NAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATF 689

Query: 193 ASVLSVC------DAGLLEFGRQL--HSLVTKSG-FSCLVSVV 226
            SVL  C      D GL  F   L  + L  +S  +SC+V ++
Sbjct: 690 VSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDIL 732


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 230/719 (31%), Positives = 368/719 (51%), Gaps = 44/719 (6%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLK-PDIYSLSTTLAACANLRNAAFGNQLH 80
           L  N  +   + +G +  A+  +V++ S      PD ++L   + +CA L   + G  +H
Sbjct: 105 LPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVH 164

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A   GL    +V + ++ +Y +A                               G + 
Sbjct: 165 RTARAIGLANDVYVGSALVKMYADA-------------------------------GLLG 193

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A + FD +P+RD  ++N M+ GC + G  D  + LFR M       +  + A  LSVC 
Sbjct: 194 NARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCA 253

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            DA LL  G QLHSL  K G    V+V N L+ MY  C  + DA ++FE       D ++
Sbjct: 254 TDADLLS-GAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD--DLVT 310

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N M+ G    G   EA   F DM  +  RP  +T VS++ A       + G +VH   +
Sbjct: 311 WNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIV 370

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++       + +A + +Y  C  +  A  ++   +  D+V  +TMIS Y    +   A+ 
Sbjct: 371 RNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQ 430

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  +    I+P+  T  S+L   AS   + + + IH +V  N       V +AL+  YA
Sbjct: 431 MFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYA 490

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  R+  ++ IF  MS ++ +TWN++I+ F  NG P + L  F ++ M  ++ +  T+S 
Sbjct: 491 KCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISA 550

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           ALS+CA + ++ +GK+IHG  +K  + + +   +A+I +YAKCG+L+ +LRVF  M +K+
Sbjct: 551 ALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKN 610

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            +SWN++ISAY  HG  KE+VS    MQ+ G  KPD  TF A++SAC+HAGLV++G ++F
Sbjct: 611 EVSWNSIISAYGAHGLVKESVSLLHGMQEEG-YKPDHVTFLALISACAHAGLVEEGVQLF 669

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             M   Y   P  +H +CM+DL  R+G LD+A + I     +  +  W AL  AC  H N
Sbjct: 670 QCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRN 729

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + L  I +  L + +      YVL+SNI A AG W+  + +R L+K   ++K PG SW+
Sbjct: 730 VELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWV 788



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 195/680 (28%), Positives = 334/680 (49%), Gaps = 52/680 (7%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAG-LKAYPHVA--NTILSLYKNARDLVSVKRVFS 116
           L   L  C +  +   G Q+HA A+ +G L  + H+A    +L +Y  AR       VFS
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
            +      S                            LP +N +I G T  G   + +  
Sbjct: 95  ALPRAAAAS---------------------------SLP-WNWLIRGFTAAGQHHLAVLF 126

Query: 177 FREM--HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           + +M  H      D ++   V+  C A G +  GR +H      G +  V V +AL+ MY
Sbjct: 127 YVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMY 186

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            + G + +A   F+      C  + +NVMMDG    G V+ A+  FR+M  +   P+  T
Sbjct: 187 ADAGLLGNARDAFDGIPERDC--VLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFAT 244

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
               +S C        G Q+H+ A+K G E   +V+N  + MY+ C  +D+A  +F  + 
Sbjct: 245 LACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMP 304

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVE 406
           + D+V+WN MIS   Q  L   A   + +MQ  G RPD  T  SLL +    +G  +  E
Sbjct: 305 QDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKE 364

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H ++  N +  ++ + +AL+  Y K   ++ A  ++      +++  +T+I+G++LNG
Sbjct: 365 -VHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNG 423

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + LQ F  LL   ++P+  T++  L  CA +++L  G+QIHGYVL+N    K  + +
Sbjct: 424 MSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVES 483

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCG LD S  +F  M +KD ++WN++IS+++Q+G+ +EA+  F+ M   G IK
Sbjct: 484 ALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEG-IK 542

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAE 645
            +  T +A LSAC+    +  G  I    +   G I A+    S ++D+  + G L+ A 
Sbjct: 543 YNNITISAALSACASLPAIYYGKEIHGVTIK--GPIKADIFAESALIDMYAKCGNLELAL 600

Query: 646 RVINSQHIQARSD-NWWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAA 703
           RV   + +  +++ +W ++ SA  AHG ++    ++ G+  E  +     ++ L +  A 
Sbjct: 601 RVF--EFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAH 658

Query: 704 AGLWEEAANIRELLKRTGVI 723
           AGL EE   + + + +  +I
Sbjct: 659 AGLVEEGVQLFQCMTKKYLI 678



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 206/450 (45%), Gaps = 43/450 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   ++G + +A  LF  +  S   +PD  +L + L A  +L     G ++H
Sbjct: 308 LVTWNGMISGCVQNGLFVEAFGLFYDMQRSGA-RPDSITLVSLLPALTDLNGLKQGKEVH 366

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y +R  +     + + ++ +Y   RD                               V 
Sbjct: 367 GYIVRNCVNMDVFLVSALVDIYFKCRD-------------------------------VR 395

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  ++D     D+ + + MI+G   NG  +  + +FR + +  ++ +  + ASVL  C 
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA 455

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G+Q+H  V ++ +     V +AL+ MY  CG +  +  +F +      D +++
Sbjct: 456 SMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQK--DEVTW 513

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRV--GYQVHAQAMK 316
           N M+   +  G+ +EAL  FR M +  ++ + +T  + +SAC   P +  G ++H   +K
Sbjct: 514 NSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK 573

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              +A     +A I MY+ CG ++ A  +F  + +K+ VSWN++IS Y    L + ++  
Sbjct: 574 GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSL 633

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYA 432
              MQ  G +PD  TF +L+   A +G +E  V++         I   ++    ++  Y+
Sbjct: 634 LHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYS 693

Query: 433 KNERIKQAYQIFHNMSPR-NIITWNTLING 461
           ++ ++ +A Q   +M  + +   W  L++ 
Sbjct: 694 RSGKLDKAIQFIADMPFKPDAGIWGALLHA 723


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/717 (31%), Positives = 382/717 (53%), Gaps = 46/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  ++ G  ++A+  F+++  +  LK    SL + L+A A+L    +G+ +HA A+
Sbjct: 278 NVMISGHAKRGFAEEAISFFLELKKT-GLKATRSSLGSVLSAIASLSMLNYGSMVHAQAI 336

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL    +V + ++++Y                            + C+KM   D A +
Sbjct: 337 KEGLDDNVYVGSALVNMY----------------------------AKCSKM---DAAKQ 365

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VF+ + +R++ ++NAM+ G  +NG     +  F  M +   + D ++F S+ S C +   
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHY 425

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+FG QLH+++ K+ F+  + V NAL+ MY   G + +A K FE  K  + D++S+N ++
Sbjct: 426 LDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMK--IHDNVSWNAII 483

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G       +EA   FR M+   + P E++  S++SAC   +    G Q H   +K G +
Sbjct: 484 VGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLD 543

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             T   ++ I MY  CG +  A  +F  +  +++VS N +I+ Y   +L   AI  + E+
Sbjct: 544 TSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEI 602

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ-VSNALISAYAKNER 436
           Q VG++P E TF  LL       M+ +   IH  V   G +++ + V  +L+  Y  ++R
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQR 662

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
              +  +F  +  P+ ++ W  LI+G+       + LQ +  +    + PD+ T +  L 
Sbjct: 663 FADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLR 722

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT-I 554
           +CA +SSL+ G+++H  +            +++I +YAKCGD+  SL+VF+ M  +++ I
Sbjct: 723 ACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVI 782

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I   A++G  +EA+  FK M+    I PD+ TF  VLSACSHAG V +G ++FD 
Sbjct: 783 SWNSMIVGLAKNGYAEEALEIFKQMEQQ-SIIPDEVTFLGVLSACSHAGRVSEGRKVFDL 841

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MVN+Y   P  DHL CM+D+LGR G+L+EAE  IN    +A    W  L  AC  HG+  
Sbjct: 842 MVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEV 901

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+  A  L+E +    S YVLLS +YA +  W  A ++R  +K  GV K PG SWI
Sbjct: 902 RGKRAANKLMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWI 958



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 194/758 (25%), Positives = 330/758 (43%), Gaps = 89/758 (11%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           +H ++P+ ++ +  L+AC+ L++  +G Q+H    + G          ++ +Y   R+L 
Sbjct: 135 NHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-------------------- 149
             + VF    N D  SWTT ++   + G    A +VFDKM                    
Sbjct: 195 DARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYV 254

Query: 150 ---------------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                          P+ ++  +N MI+G  + G+ +  I  F E+ K  ++    S  S
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314

Query: 195 VLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS +    +L +G  +H+   K G    V V +AL+ MY  C  +  A +VF       
Sbjct: 315 VLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER- 373

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + + +N M+ G A  G  +E +  F  M     +P E TF S+ SAC        G Q+
Sbjct: 374 -NIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K+ F +   V+NA + MY+  G + EA   F  ++  D VSWN +I  Y Q    
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A   +  M S G+ PDE +  S++++   ++     +  H  +   G+ T+    ++L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSL 552

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y K   +  A  +F++M  RN+++ N LI G+ ++    + +  F E+ M  L+P E
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE-EAIHLFQEIQMVGLKPTE 611

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL-GNAMITLYAKCGDLDCSLRVFN 546
            T +  L  C     L  G+QIHG V+K   +S   +   +++ +Y        S  +F+
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFS 671

Query: 547 -MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
            +   K  + W ALIS YAQ    ++A+  ++ M+    I PDQATF +VL AC+    +
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRS-DNILPDQATFASVLRACAGMSSL 730

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDL------------------------------- 634
             G  +  S++   GF   E   S ++D+                               
Sbjct: 731 QTGQEV-HSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIV 789

Query: 635 -LGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
            L + GY +EA  +   +  Q I      +  + SAC+  G +  GR +  L++   + +
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849

Query: 691 PSVYVL--LSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           P V  L  + +I    G   EA    E + + G    P
Sbjct: 850 PRVDHLGCMVDILGRWGFLNEA---EEFINKLGCKADP 884



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 243/482 (50%), Gaps = 41/482 (8%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G+VD+A + F ++  +D+  +N++++   ++G     +  F  M    VR + ++FA
Sbjct: 87  VKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFA 146

Query: 194 SVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            VLS C +GL  + +G+Q+H  V K GF         LI MY  C N+ DA  VF+ A  
Sbjct: 147 MVLSAC-SGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALN 205

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              D +S+  ++ G    G   EA+  F  M      P ++  V+V++A           
Sbjct: 206 L--DTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA----------- 252

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                Y + G++ +A  +F ++   ++V+WN MIS +A+R    
Sbjct: 253 ---------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            AI  +LE++  G++    + GS+L++   + M+    M+HA     G+  N+ V +AL+
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALV 351

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK  ++  A Q+F+++  RNI+ WN ++ GF  NG   + ++ FS +     +PDE+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEF 411

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T +   S+CA +  L  G Q+H  ++KN   S + + NA++ +YAK G L  + + F  M
Sbjct: 412 TFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFM 471

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D +SWNA+I  Y Q     EA   F+ M   G + PD+ +  +++SAC++      G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVKEFKQG 530

Query: 609 TR 610
            +
Sbjct: 531 QQ 532



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 222/490 (45%), Gaps = 55/490 (11%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   + +HS   K G      + N ++ +Y  CGNV  A K F   +    D  ++N ++
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKK--DVFAWNSVL 114

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
                 G     +  F  M    +RP+E TF  V+SAC   +    G QVH    K GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             +      I MY+ C  + +A ++F      D VSW T+I+ Y +      A+  + +M
Sbjct: 175 FRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKM 234

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           Q VG  PD+            I +V +I+A+V +                     R+  A
Sbjct: 235 QRVGHVPDQ------------IALVTVINAYVALG--------------------RLADA 262

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  +   N++ WN +I+G    GF  + +  F EL  + L+    +L   LS+ A +
Sbjct: 263 RKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASL 322

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S L +G  +H   +K  L   + +G+A++ +YAKC  +D + +VFN + E++ + WNA++
Sbjct: 323 SMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAML 382

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             +AQ+G  +E +  F  M+  G  +PD+ TFT++ SAC+    +D G ++   M+ +  
Sbjct: 383 GGFAQNGLAQEVMEFFSYMKRHGP-QPDEFTFTSIFSACASLHYLDFGGQLHTVMIKN-K 440

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F       + ++D+  ++G L EA +      I                H N+    II 
Sbjct: 441 FTSNLFVANALVDMYAKSGALKEARKQFEFMKI----------------HDNVSWNAIIV 484

Query: 681 GLLLEREQDK 690
           G + E   D+
Sbjct: 485 GYVQEEYNDE 494



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 153/327 (46%), Gaps = 12/327 (3%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   ++IH+     G+     + N ++  Y K   +  A + F  +  +++  WN++++ 
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +L +G     +Q F  +    +RP+E+T ++ LS+C+ +  + +GKQ+H  V K     +
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
                 +I +YAKC +L  +  VF+  +  DT+SW  LI+ Y + G   EAV  F  MQ 
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQR 236

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           VG + PDQ     V++A    G + D  ++F  + N     P     + M+    + G+ 
Sbjct: 237 VGHV-PDQIALVTVINAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFA 290

Query: 642 DEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV--L 696
           +EA      +    ++A   +  ++ SA A+   L  G ++    ++   D  +VYV   
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDD-NVYVGSA 349

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVI 723
           L N+YA     + A  +   L    ++
Sbjct: 350 LVNMYAKCSKMDAAKQVFNSLGERNIV 376



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 126/301 (41%), Gaps = 65/301 (21%)

Query: 476 SELLMSELRPDEYTLSVALSSCARISS--------------LRHGKQIHGYVLKNNLISK 521
           ++ L+  L P    L + L  C RI +              L   K IH   LK  +  K
Sbjct: 16  NQQLVKILSPHSEFLQICLQHCRRIQAHNLFNEKPKAVLQALSTAKVIHSKSLKIGVGLK 75

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             LGN ++ LY KCG++D + + F+ + +KD  +WN+++S Y  HG     V  F  M +
Sbjct: 76  GLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWN 135

Query: 582 VGRIKPDQATFTAVLSACS--------------------------HAGLVD--------- 606
            G ++P++ TF  VLSACS                            GL+D         
Sbjct: 136 HG-VRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLR 194

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLG--RAGYLDEAERVINSQHIQARSDNWWALF 664
           D   +FD  +N        D +S    + G  R G+  EA +V +         +  AL 
Sbjct: 195 DARLVFDGALN-------LDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALV 247

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVY---VLLSNIYAAAGLWEEAANIRELLKRTG 721
           +   A+  + LGR+     L  +   P+V    V++S  +A  G  EEA +    LK+TG
Sbjct: 248 TVINAY--VALGRLADARKLFTQIPNPNVVAWNVMISG-HAKRGFAEEAISFFLELKKTG 304

Query: 722 V 722
           +
Sbjct: 305 L 305


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/628 (34%), Positives = 342/628 (54%), Gaps = 22/628 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D++   T ++   ++G    A ++FD+MPDR+   +  +I+G T+NG  +   G+ +E
Sbjct: 32  DSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMPEDACGVLKE 91

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFS-CLVSVVNALITMYFNC 236
           M       + ++F S +  C   +L    GRQ+H    ++G +   V+V N LI MY  C
Sbjct: 92  MIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKC 151

Query: 237 GNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           G++  A  VF    G + D   +S+N M+ GL      E+A+  +  M    L PS    
Sbjct: 152 GDIDHARSVF----GLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFAL 207

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +S +S+C    C  +G Q H + +K G +   SVSN  + +Y+   ++ E   +F+ + E
Sbjct: 208 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE 267

Query: 352 KDIVSWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEM 407
           +D VSWNT+I   A      S AI  +LEM   G  P+  TF +LLA+   +   ++   
Sbjct: 268 RDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQ 327

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
           IHA +    +  +  + NAL++ Y K+  ++   +IF  MS R + ++WN++I+G++ N 
Sbjct: 328 IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNE 387

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + +     ++    R D +T +  LS+CA +++L  G ++H   ++  L S + +G+
Sbjct: 388 LLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIGS 447

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y+KCG +D + R FN+M  ++  SWN++IS YA+HG G  A+  F  M+  G++ 
Sbjct: 448 ALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQL- 506

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  TF  VLSACSH GLVD+G   F SM   YG +P  +H SCM+DLLGRAG LD+ E 
Sbjct: 507 PDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIEN 566

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLR---LGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            IN   I+     W  +  AC   GN R   LGR  A +L   +      YVLLSN+YA+
Sbjct: 567 FINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYAS 625

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G WE+ A  R  ++   V K+ GCSW+
Sbjct: 626 GGKWEDMARTRRAMREAAVKKEAGCSWV 653



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 238/474 (50%), Gaps = 17/474 (3%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            H  V K GF   + + N LI +Y   G+ V A K+F+E      + +++  ++ G    
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDR--NGVTWACLISGYTQN 79

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGF-EAYTS 324
           G  E+A    ++M+     P+   F S + AC    L  R G QVH  A+++G  +A  +
Sbjct: 80  GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVA 139

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  I MY+ CG ID A  +F  + +KD VSWN+MI+   Q      A+ +Y  M+  G
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + P  F   S L   AS G I + +  H      G+  ++ VSN L++ YA+  R+ +  
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPV-QGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++F  M  R+ ++WNT+I     +G  V + ++ F E++ +   P+  T    L++ + +
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNAL 559
           S+ +   QIH  +LK N+    ++ NA++  Y K G+++    +F+ M E +D +SWN++
Sbjct: 320 STSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 379

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           IS Y  +    +A+     M   G+ + D  TF  VLSAC+    ++ G  +    +   
Sbjct: 380 ISGYIHNELLCKAMDLVWLMMQRGQ-RLDCFTFATVLSACATVATLECGMEVHACAIR-- 436

Query: 620 GFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             + ++  + S ++D+  + G +D A R  N   ++    +W ++ S  A HG+
Sbjct: 437 ACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLY-SWNSMISGYARHGH 489



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 265/557 (47%), Gaps = 49/557 (8%)

Query: 55  PDIYSLSTTLAAC-ANLRNAAFGNQLHAYALRAGLK-AYPHVANTILSLYKNARDLVSVK 112
           P+ ++  + + AC  ++     G Q+H YA+R GL  A   V N ++++Y    D+   +
Sbjct: 99  PNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHAR 158

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF  + + D  SW                               N+MITG  +N   + 
Sbjct: 159 SVFGLMVDKDSVSW-------------------------------NSMITGLDQNKCFED 187

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +  +  M K  +   N++  S LS C + G +  G+Q H    K G    VSV N L+ 
Sbjct: 188 AVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLA 247

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG-RVEEALIRFRDMLVASLRPS 290
           +Y     + +  KVF        D +S+N ++  LA  G  V EA+  F +M+ A   P+
Sbjct: 248 LYAETSRLAECQKVFSWMLER--DQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPN 305

Query: 291 ELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            +TF++++   S+    ++ +Q+HA  +K   +   ++ NA +  Y   G+++    IF+
Sbjct: 306 RVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFS 365

Query: 348 RLQE-KDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           R+ E +D VSWN+MIS Y    L   A+ L +L MQ  G R D FTF ++L++   +  +
Sbjct: 366 RMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQR-GQRLDCFTFATVLSACATVATL 424

Query: 406 EM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E    +HA      + +++ + +AL+  Y+K  RI  A + F+ M  RN+ +WN++I+G+
Sbjct: 425 ECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGY 484

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISK 521
             +G     L+ F+ + +S   PD  T    LS+C+ I  +  G +    + +   L+ +
Sbjct: 485 ARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPR 544

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           +   + M+ L  + G+LD      N M I+ + + W  ++ A  + G G++     +A +
Sbjct: 545 VEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCR-GNGRKTELGRRAAE 603

Query: 581 DVGRIKPDQATFTAVLS 597
            +  + P  A    +LS
Sbjct: 604 MLFNMDPQNAVNYVLLS 620



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 201/444 (45%), Gaps = 41/444 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L ++  ++DA+  +  +  +  L P  ++L + L++CA+L     G Q H   +
Sbjct: 173 NSMITGLDQNKCFEDAVKSYNSMRKT-GLMPSNFALISALSSCASLGCILLGQQTHGEGI 231

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG-HVDYAC 143
           + GL     V+NT+L+LY     L   ++VFS +   D  SW T + A    G  V  A 
Sbjct: 232 KLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           EVF +M          M  G + N    I +                  A+V S+  + L
Sbjct: 292 EVFLEM----------MRAGWSPNRVTFINL-----------------LATVSSLSTSKL 324

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
                Q+H+L+ K       ++ NAL+  Y   G + +  ++F        D +S+N M+
Sbjct: 325 ---SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERR-DEVSWNSMI 380

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
            G      + +A+     M+    R    TF +V+SAC        G +VHA A+++  E
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLE 440

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   + +A + MYS CG+ID A   F  +  +++ SWN+MIS YA+   G +A+  +  M
Sbjct: 441 SDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRM 500

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +  G  PD  TF  +L++   I +V    E   +   + G++  ++  + ++    +   
Sbjct: 501 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGE 560

Query: 437 IKQAYQIFHNMSPR-NIITWNTLI 459
           + +     + M  + NI+ W T++
Sbjct: 561 LDKIENFINKMPIKPNILIWRTVL 584



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 175/384 (45%), Gaps = 8/384 (2%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K GF++   + N  I +Y   G    A  +F  + +++ V+W  +IS Y Q  + 
Sbjct: 23  HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGMP 82

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGI-ITNIQVSN 425
             A     EM   G  P+ F FGS +     S  +      +H +    G+    + V N
Sbjct: 83  EDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGN 142

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            LI+ YAK   I  A  +F  M  ++ ++WN++I G   N      ++ ++ +  + L P
Sbjct: 143 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 202

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             + L  ALSSCA +  +  G+Q HG  +K  L   +S+ N ++ LYA+   L    +VF
Sbjct: 203 SNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVF 262

Query: 546 NMMIEKDTISWNALISAYAQHGEG-KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           + M+E+D +SWN +I A A  G    EA+  F  M   G   P++ TF  +L+  S    
Sbjct: 263 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAG-WSPNRVTFINLLATVSSLST 321

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
                +I  +++  Y         + +L   G++G ++  E + +    +    +W ++ 
Sbjct: 322 SKLSHQIH-ALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380

Query: 665 SACAAHGNLRLGRIIAGLLLEREQ 688
           S    +  L     +  L+++R Q
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQ 404



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 112/201 (55%), Gaps = 3/201 (1%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           + H  V  +G  +++ + N LI+ Y +      A ++F  M  RN +TW  LI+G+  NG
Sbjct: 21  LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCAR-ISSLRHGKQIHGYVLKNNL-ISKMSL 524
            P        E++     P+ +    A+ +C   +   R G+Q+HGY ++  L  +K+++
Sbjct: 81  MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAV 140

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GN +I +YAKCGD+D +  VF +M++KD++SWN++I+   Q+   ++AV  + +M+  G 
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG- 199

Query: 585 IKPDQATFTAVLSACSHAGLV 605
           + P      + LS+C+  G +
Sbjct: 200 LMPSNFALISALSSCASLGCI 220


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 229/688 (33%), Positives = 379/688 (55%), Gaps = 46/688 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++ D ++    L ACA+  +   G ++H    + G  +   V NT+L  Y N   L  VK
Sbjct: 3   VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF                               D+M +RD+  +N++I   + +G+   
Sbjct: 63  RVF-------------------------------DEMLERDVVSWNSVIGVFSVHGFYAE 91

Query: 173 GIGLFREMH-KLDVRRDNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCLVSVVNAL 229
            I LF EM+ +   R +  S  SVL VC AGL +   GRQ+H  V K+G    V+V NAL
Sbjct: 92  AIHLFCEMNLRSGFRPNMVSIVSVLPVC-AGLEDGVTGRQIHCYVVKTGLDSQVTVGNAL 150

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + +Y  CG V D+ +VF+E      + +S+N ++  LA + R ++AL  FR M+   ++P
Sbjct: 151 VDVYGKCGYVKDSRRVFDEISER--NGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKP 208

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           + +TF S++   +  ++   G ++H  +++ G E+   V+NA I MY+  G+  +A  +F
Sbjct: 209 NSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVF 268

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
            ++ EK+IVSWN M++ +AQ  L  +A+    +MQ+ G  P+  TF ++L   A  GF+ 
Sbjct: 269 NQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLR 328

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             + IHA     G   ++ VSNAL   YAK   +  A ++F  +S R+ +++N LI G+ 
Sbjct: 329 PGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYS 387

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
                 + L+ F E+ +  ++ D  +    +S+CA +++L+ GK++HG  ++ +L + + 
Sbjct: 388 QTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLF 447

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + NA++  Y KCG +D + +VF  +  +DT SWN++I  Y   GE   A++ F+AM++ G
Sbjct: 448 IANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDG 507

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            ++ D  ++ AVLSACSH GLV++G + F+ M       P + H +CM+DLLGRAG ++E
Sbjct: 508 -VEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQMHYACMVDLLGRAGLIEE 565

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A ++I S  I+  ++ W AL  AC  HG + L    A  L + +      Y +LSN+YA 
Sbjct: 566 AVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAE 625

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AG W+EA  +R+L+K  G  K PGCSW+
Sbjct: 626 AGKWDEANQVRKLMKSRGAKKNPGCSWV 653



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 148/599 (24%), Positives = 280/599 (46%), Gaps = 52/599 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S  G Y +A+HLF +++     +P++ S+ + L  CA L +   G Q+H Y +
Sbjct: 77  NSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVV 136

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +   V N ++ +Y     +   +RVF EI   +  SW                  
Sbjct: 137 KTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW------------------ 178

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                        NA+IT           + +FR M    V+ ++ +F+S+L V  +  L
Sbjct: 179 -------------NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKL 225

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            +FG+++H    + G    + V NALI MY   G  + A  VF +      + +S+N M+
Sbjct: 226 FDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK--NIVSWNAMV 283

Query: 264 DGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKS 317
              A   R+E A +   R M      P+ +TF +V+ A  C R+G+     ++HA+A+++
Sbjct: 284 ANFAQ-NRLELAAVDLVRQMQADGEIPNSVTFTNVLPA--CARIGFLRPGKEIHARAIRT 340

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G      VSNA   MY+ CG ++ A  +F ++  +D VS+N +I  Y+Q      ++  +
Sbjct: 341 GSSVDLFVSNALTDMYAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLF 399

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
           LEM   G++ D  ++  ++++   +  ++    +H       + T++ ++NAL+  Y K 
Sbjct: 400 LEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKC 459

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI  A ++F  +  R+  +WN++I G+ + G     +  F  +    +  D  +    L
Sbjct: 460 GRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVL 519

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDT 553
           S+C+    +  GK+   ++   N+         M+ L  + G ++ ++++  ++ IE D 
Sbjct: 520 SACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDA 579

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
             W AL+ A   HG  + A     A + + ++KP  + + +VLS   + AG  D+  ++
Sbjct: 580 NVWGALLGACRIHGYIELA---HWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQV 635


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/715 (30%), Positives = 383/715 (53%), Gaps = 50/715 (6%)

Query: 30  NLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           ++ R  H    L L  Q ++     PD+ + S  L +C   RN   G  +H   +++GL+
Sbjct: 3   DVGRLHHAFSTLDLMTQQNAP----PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLE 58

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               V NT++SLY    D  + + +F  + N                             
Sbjct: 59  LDSVVLNTLISLYSKCGDTETARLIFEGMGNK---------------------------- 90

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
             RDL  ++AM++    N  E   I  F +M +L    + Y FA+V+  C +A     G 
Sbjct: 91  --RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGE 148

Query: 209 QLHSLVTKSGF-SCLVSVVNALITMYFN-CGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            ++  V K+G+    V V   LI M+    G++  A KVF++      + +++ +M+   
Sbjct: 149 IIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER--NLVTWTLMITRF 206

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           A +G   +A+  F DM ++   P   T+ SV+SAC       +G Q+H++ ++ G     
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266

Query: 324 SVSNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLE 379
            V  + + MY+ C   G +D++  +F ++ E +++SW  +I+ Y Q     + AI  + +
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 326

Query: 380 MQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M S  IRP+ F+F S+L + G +      E ++++    GI +   V N+LIS YA++ R
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGR 386

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A + F  +  +N++++N +++G+  N    +    F+E+  + +    +T +  LS 
Sbjct: 387 MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSG 446

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A I ++  G+QIHG +LK    S   + NA+I++Y++CG+++ + +VFN M +++ ISW
Sbjct: 447 AASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISW 506

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            ++I+ +A+HG    A+  F  M + G  KP++ T+ AVLSACSH G++ +G + F+SM 
Sbjct: 507 TSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            ++G +P  +H +CM+DLLGR+G L EA   INS  + A +  W  L  AC  HGN  LG
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG 625

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           R  A ++LE+E D P+ Y+LLSN++A+AG W++   IR+ +K   +IK+ GCSWI
Sbjct: 626 RHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 680



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 245/486 (50%), Gaps = 43/486 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+   + +   ++ G  +DA+ LF+ +  S  + PD ++ S+ L+AC  L   A G QLH
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLH 254

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  +R GL     V  +++ +Y                            + C   G VD
Sbjct: 255 SRVIRLGLALDVCVGCSLVDMY----------------------------AKCAADGSVD 286

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC 199
            + +VF++MP+ ++  + A+IT   ++G  D   I LF +M    +R +++SF+SVL  C
Sbjct: 287 DSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 346

Query: 200 DAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                 + G Q++S   K G + +  V N+LI+MY   G + DA K F+    +  + +S
Sbjct: 347 GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL--FEKNLVS 404

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           YN ++DG A   + EEA + F ++    +  S  TF S++S          G Q+H + +
Sbjct: 405 YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLL 464

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G+++   + NA I+MYS CG I+ A  +F  +++++++SW +MI+ +A+      A+ 
Sbjct: 465 KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALE 524

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAY 431
            + +M   G +P+E T+ ++L++   + M+    +  ++    +GI+  ++    ++   
Sbjct: 525 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 584

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            ++  + +A +  ++M    + + W TL+    ++G    G +H +E+++ E  PD+   
Sbjct: 585 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMIL-EQEPDDPAA 642

Query: 491 SVALSS 496
            + LS+
Sbjct: 643 YILLSN 648



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 192/430 (44%), Gaps = 61/430 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++A+ LF ++ S H ++P+ +S S+ L AC NL +   G Q+++YA++ G+ +   V N+
Sbjct: 318 KEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 376

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++S+Y                                + G ++ A + FD + +++L  Y
Sbjct: 377 LISMY-------------------------------ARSGRMEDARKAFDILFEKNLVSY 405

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTK 216
           NA++ G  +N   +    LF E+    +    ++FAS+LS     G +  G Q+H  + K
Sbjct: 406 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 465

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G+     + NALI+MY  CGN+  A +VF E +    + IS+  M+ G A  G    AL
Sbjct: 466 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRAL 523

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM--KSGFEAYTSVSNAAI 330
             F  ML    +P+E+T+V+V+SA  C  VG     Q H  +M  + G           +
Sbjct: 524 EMFHKMLETGTKPNEITYVAVLSA--CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 581

Query: 331 TMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQSVGIR 386
            +    G + EA      +    D + W T++     +    LGR A    LE +     
Sbjct: 582 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE----- 636

Query: 387 PDE----FTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISAYAKNERI 437
           PD+        +L AS+G  + V  I   +    +I       I+V N +   +      
Sbjct: 637 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 696

Query: 438 KQAYQIFHNM 447
            QA+QI+  +
Sbjct: 697 PQAWQIYQEL 706


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 221/709 (31%), Positives = 361/709 (50%), Gaps = 45/709 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G    A+ LFV    +    P+ + L++ L AC   +  + G Q+H  A++  L A 
Sbjct: 95  TQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDAN 154

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            +V   +++LY                                K+G +D A  VF  +P 
Sbjct: 155 VYVGTALINLY-------------------------------AKLGCMDEAMLVFHALPV 183

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           R    +N +ITG  + G   + + LF  M    VR D +  AS +S C A G LE GRQ+
Sbjct: 184 RTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQI 243

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLAS 268
           H    +S      SV+N LI +Y  C  +  A K+F+  E +  V    S+  M+ G   
Sbjct: 244 HGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLV----SWTTMISGYMQ 299

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
                EA+  F +M  A  +P      S++++C        G Q+HA  +K+  EA   V
Sbjct: 300 NSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYV 359

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA I MY+ C  + EA  +F  L E D +S+N MI  Y++      A+  +  M+   +
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL 419

Query: 386 RPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RP   TF SLL  S     IE+ + IH  +  +G   ++  ++ALI  Y+K   +  A  
Sbjct: 420 RPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKT 479

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F+ +  ++++ WN++I G   N    + ++ F++LL+S + P+E+T    ++  + ++S
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           + HG+Q H +++K  + +   + NA+I +YAKCG +     +F     +D I WN++I+ 
Sbjct: 540 MFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITT 599

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YAQHG  +EA+  F+ M +   ++P+  TF  VLSAC+HAG V +G   F+SM ++Y   
Sbjct: 600 YAQHGHAEEALQVFRLMGE-AEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIE 658

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H + +++L GR+G L  A+  I    I+  +  W +L SAC   GN  +GR  A +
Sbjct: 659 PGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEM 718

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L  +      YVLLSNIYA+ GLW +  N+R+ +  +G +K+ GCSWI
Sbjct: 719 ALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWI 767



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 288/601 (47%), Gaps = 16/601 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++     L   + +G +  A  +FD+MP R+L  + ++I+  T++G +D  I LF    
Sbjct: 52  DLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQ 111

Query: 182 KLDVRRDN-YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           K      N +  ASVL  C  +  +  G Q+H +  K      V V  ALI +Y   G +
Sbjct: 112 KASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCM 171

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A  VF      V   +++N ++ G A +G    AL  F  M +  +RP      S +S
Sbjct: 172 DEAMLVFHALP--VRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVS 229

Query: 300 ACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G Q+H  A +S  E  TSV N  I +Y  C ++  A  +F  ++ +++VS
Sbjct: 230 ACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVS 289

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           W TMIS Y Q +    AI  +  M   G +PD F   S+L S G +  +     IHA V 
Sbjct: 290 WTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVI 349

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +  +  V NALI  YAK E + +A  +F  ++  + I++N +I G+  N    + + 
Sbjct: 350 KADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVN 409

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +    LRP   T    L   +   ++   KQIHG ++K+     +   +A+I +Y+
Sbjct: 410 IFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYS 469

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  ++ +  VFNM+  KD + WN++I  +AQ+ +G+EA+  F  +   G + P++ TF 
Sbjct: 470 KCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSG-MAPNEFTFV 528

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAERVINSQH 652
           A+++  S    +  G + F + +   G +  + H+S  ++D+  + G++ E  R++    
Sbjct: 529 ALVTVASTLASMFHGQQ-FHAWIIKAG-VDNDPHVSNALIDMYAKCGFIKEG-RMLFEST 585

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAA 711
                  W ++ +  A HG+      +  L+ E E +   V +V + +  A AG   E  
Sbjct: 586 CGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGL 645

Query: 712 N 712
           N
Sbjct: 646 N 646



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 234/452 (51%), Gaps = 11/452 (2%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H+  T +G    + + N L+  Y N G + DA  +F+       + +S+  ++      
Sbjct: 40  IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHR--NLVSWGSVISMYTQH 97

Query: 270 GRVEEALIRFRDMLVASLR-PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
           GR + A+  F     AS   P+E    SV+ AC   +   +G QVH  A+K   +A   V
Sbjct: 98  GRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYV 157

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             A I +Y+  G +DEA ++F  L  +  V+WNT+I+ YAQ   G  A+  +  M   G+
Sbjct: 158 GTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGV 217

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPD F   S +++    GF+E    IH + + +   T+  V N LI  Y K  R+  A +
Sbjct: 218 RPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARK 277

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  RN+++W T+I+G++ N F  + +  F  +  +  +PD +  +  L+SC  +++
Sbjct: 278 LFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAA 337

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +  G+QIH +V+K +L +   + NA+I +YAKC  L  +  VF+ + E D IS+NA+I  
Sbjct: 338 IWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEG 397

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y+++ +  EAV+ F+ M+    ++P   TF ++L   S + L  + ++    ++   G  
Sbjct: 398 YSKNRDLAEAVNIFQRMRFFS-LRPSLLTFVSLLGVSS-SQLAIELSKQIHGLIIKSGTS 455

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
                 S ++D+  +   +++A+ V N  H +
Sbjct: 456 LDLYAASALIDVYSKCSLVNDAKTVFNMLHYK 487



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 183/351 (52%), Gaps = 8/351 (2%)

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R+   +HA+A  +G      ++N  +  YS+ G++ +A  +F R+  +++VSW ++IS Y
Sbjct: 35  RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMY 94

Query: 365 AQRNLGRSAILAYLEMQSVGIR-PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
            Q      AI  ++  Q      P+EF   S+L     S  + + E +H       +  N
Sbjct: 95  TQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDAN 154

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V  ALI+ YAK   + +A  +FH +  R  +TWNT+I G+   G     L+ F  + +
Sbjct: 155 VYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGI 214

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             +RPD + L+ A+S+C+ +  L  G+QIHGY  ++   +  S+ N +I LY KC  L  
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + ++F+ M  ++ +SW  +IS Y Q+    EA++ F  M   G  +PD    T++L++C 
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAG-WQPDGFACTSILNSCG 333

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINS 650
               +  G +I   ++     + A++++ + ++D+  +  +L EA  V ++
Sbjct: 334 SLAAIWQGRQIHAHVIK--ADLEADEYVKNALIDMYAKCEHLTEARAVFDA 382


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 226/717 (31%), Positives = 378/717 (52%), Gaps = 75/717 (10%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA--NTILSLYKNARDLVS 110
             PD ++    L A A ++    G Q+HA+  + G  ++  V   NT++++Y        
Sbjct: 6   FSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMY-------- 57

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   K G +  A +VFD++ +RD   +N++I+        
Sbjct: 58  -----------------------GKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEW 94

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVV 226
           ++ I  FR M        +++  S+   C        L  G+Q+H    + G     S  
Sbjct: 95  EVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSN- 153

Query: 227 NALITMYFNCGNVVDACKV---FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           NAL+ MY   G + DA  +   FE+      D +++N M+   +   R  EAL+  R M+
Sbjct: 154 NALMAMYAKLGRLDDAKSLLVLFEDR-----DLVTWNSMISSFSQNERFMEALMFLRLMV 208

Query: 284 VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS-VSNAAITMYSSCGKI 339
           +  ++P  +TF SV+ AC      R G ++HA A+++      S V +A + MY +CG++
Sbjct: 209 LEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQV 268

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEFTFGSLLAS 398
           +   ++F  + ++ I  WN MI+ YAQ      A++ ++EM++  G+  +  T  S++ +
Sbjct: 269 ESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPA 328

Query: 399 SGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
               E +   E IH +V   G+ TN  + NALI  Y++   IK + +IF +M  R+I++W
Sbjct: 329 YVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSW 388

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSE----------------LRPDEYTLSVALSSCAR 499
           NT+I  +++ G     L    E+   E                 +P+  TL   L  CA 
Sbjct: 389 NTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCAS 448

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +S+L  GK+IH Y ++N L S++++G+A++ +YAKCG L+ + RVF+ M  ++ I+WN +
Sbjct: 449 LSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVI 508

Query: 560 ISAYAQHGEGKEAVSCFKAM----QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           I AY  HG+GKE++  F+ M       G +KP + TF A+ ++CSH+G+VD+G  +F  M
Sbjct: 509 IMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKM 568

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLR 674
            N++G  PA DH +C++DL+GRAG ++EA  ++N+      +   W +L  AC  + N+ 
Sbjct: 569 KNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIE 628

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +G I A  LL+ + D  S YVLLSNIY++AGLW++A N+R  +K  GV K+PGCSWI
Sbjct: 629 IGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWI 685



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 171/329 (51%), Gaps = 13/329 (3%)

Query: 282 MLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS--NAAITMYSSC 336
           M+ +   P    F +V+ A    +   +G Q+HA   K G+ +++SV+  N  + MY  C
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL- 395
           G + +A  +F R+ E+D VSWN++IS   +      AI A+  M   G  P  FT  S+ 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 396 LASSGF-----IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           LA S       + + + IH   F  G       +NAL++ YAK  R+  A  +      R
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDR 179

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           +++TWN++I+ F  N   ++ L     +++  ++PD  T +  L +C+ +  LR GK+IH
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 511 GYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
            Y L+ +++I    +G+A++ +Y  CG ++    VF+ ++++    WNA+I+ YAQ    
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHD 299

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           ++A+  F  M+    +  +  T ++++ A
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPA 328



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/477 (22%), Positives = 215/477 (45%), Gaps = 77/477 (16%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +++ S++  + +AL +F+++     +KPD  + ++ L AC++L     G ++H
Sbjct: 181 LVTWNSMISSFSQNERFMEAL-MFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239

Query: 81  AYALRA-GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           AYALR   +     V + ++ +Y N                                G V
Sbjct: 240 AYALRTDDVIENSFVGSALVDMYCNC-------------------------------GQV 268

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV- 198
           +    VFD + DR + ++NAMI G  ++ +++  + LF EM   +     YS A+ +S  
Sbjct: 269 ESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEM---EAAAGLYSNATTMSSI 325

Query: 199 ------CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
                 C+   +     +H  V K G      + NALI MY   G++  + ++F+  +  
Sbjct: 326 VPAYVRCEG--ISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDR 383

Query: 253 VCDHISYNVMMDGLASVGRVEEALI----------------RFRDMLVASLRPSELTFVS 296
             D +S+N ++      GR  +AL+                 + D      +P+ +T ++
Sbjct: 384 --DIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMT 441

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+  C        G ++HA A+++   +  +V +A + MY+ CG ++ A  +F ++  ++
Sbjct: 442 VLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRN 501

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVG-----IRPDEFTFGSLLAS---SGFI-EM 404
           +++WN +I  Y     G+ ++  + +M + G     ++P E TF +L AS   SG + E 
Sbjct: 502 VITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEG 561

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLI 459
           + + H     +GI         ++    +  ++++AY + + M      +  W++L+
Sbjct: 562 LSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLL 618



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL--ISKMSLGNAMITLYAKC 535
           ++ S   PD +     L + A I  L  GKQIH +V K      S +++ N ++ +Y KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L  + +VF+ + E+D +SWN++ISA  +  E + A+  F+ M   G  +P   T  ++
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEG-FEPSSFTLVSM 119

Query: 596 LSACSH 601
             ACS+
Sbjct: 120 ALACSN 125


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 228/631 (36%), Positives = 336/631 (53%), Gaps = 57/631 (9%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +N +I      G+ +  + L+R M +L  R D+Y+F  VL  C +      G  +H++V 
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY-VCDHISYNVMMDGLASVGRVEE 274
            SGF   V V N L++MY  CG   +A +VF+E +   V D +S+N ++      G    
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232

Query: 275 ALIRFRDMLV-ASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           A+  F  M     +RP  ++ V+V+ AC        G QVH  A++SG      V NA +
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTM------------------------------ 360
            MY+ CG ++EA  +F R++ KD+VSWN M                              
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352

Query: 361 -----ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIH--A 410
                I+ YAQR LG  A+  + +M   G  P+  T  SLL   AS+G +   +  H  A
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412

Query: 411 FVFI-----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFL 463
             +I     N    ++ V NALI  Y+K +  K A  +F  + P  R+++TW  LI G  
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472

Query: 464 LNGFPVQGLQHFSELLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            +G   + L+ FS++L  +  + P+ +T+S AL +CAR+ +LR G+QIH YVL+N   S 
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESA 532

Query: 522 M-SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           M  + N +I +Y+K GD+D +  VF+ M +++ +SW +L++ Y  HG G+EA+  F  MQ
Sbjct: 533 MLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQ 592

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
            V  + PD  TF  VL ACSH+G+VD G   F+ M  D+G +P  +H +CM+DLL RAG 
Sbjct: 593 KVXLV-PDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 651

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           LDEA  +I    ++     W AL SAC  + N+ LG   A  LLE E      Y LLSNI
Sbjct: 652 LDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 711

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA A  W++ A IR L+K TG+ K+PGCSW+
Sbjct: 712 YANARCWKDVARIRYLMKNTGIKKRPGCSWV 742



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 229/498 (45%), Gaps = 56/498 (11%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           +I+MY    +   A  V             +N ++     +G +E+ L  +R M     R
Sbjct: 83  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142

Query: 289 PSELTFVSVMSAC-LCP--RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P   TF  V+ AC   P  R G  VHA    SGFE    V N  ++MY  CG  + A  +
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQV 202

Query: 346 FARLQEK---DIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLL---AS 398
           F  ++E+   D+VSWN++++ Y Q      A+  +  M + +GIRPD  +  ++L   AS
Sbjct: 203 FDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACAS 262

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
            G     + +H +   +G+  ++ V NA++  YAK   +++A ++F  M  +++++WN +
Sbjct: 263 VGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAM 322

Query: 459 INGF------------------------------LLNGFPVQGLQH-----FSELLMSEL 483
           + G+                              ++ G+  +GL       F ++L+   
Sbjct: 323 VTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGS 382

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLK-------NNLISKMSLGNAMITLYAKCG 536
            P+  TL   LS CA   +L HGK+ H + +K       N+    + + NA+I +Y+KC 
Sbjct: 383 EPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCK 442

Query: 537 DLDCSLRVFNMMIEKD--TISWNALISAYAQHGEGKEAVSCFKAM-QDVGRIKPDQATFT 593
               +  +F+++  KD   ++W  LI   AQHGE  EA+  F  M Q    + P+  T +
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
             L AC+  G +  G +I   ++ +          +C++D+  ++G +D A  V ++ H 
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH- 561

Query: 654 QARSDNWWALFSACAAHG 671
           Q    +W +L +    HG
Sbjct: 562 QRNGVSWTSLMTGYGMHG 579



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 251/587 (42%), Gaps = 92/587 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  +D L L+ ++      +PD Y+    L AC  + +   G  +HA    +G +    V
Sbjct: 124 GFLEDVLQLYRRMQRL-GWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFV 182

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            N ++S+Y       + ++VF E++     D+ SW + ++A  + G    A ++F++M  
Sbjct: 183 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT- 241

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                             ED+GI           R D  S  +VL  C   G    G+Q+
Sbjct: 242 ------------------EDLGI-----------RPDAVSLVNVLPACASVGAWSRGKQV 272

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    +SG    V V NA++ MY  CG + +A KVFE  K  V D +S+N M+ G + +G
Sbjct: 273 HGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMK--VKDVVSWNAMVTGYSQIG 330

Query: 271 RVEEAL-----IR------------------------------FRDMLVASLRPSELTFV 295
           R ++AL     IR                              FR ML+    P+ +T V
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGFEAYTS-------VSNAAITMYSSCGKIDEACMI 345
           S++S C        G + H  A+K       +       V NA I MYS C     A  +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 346 FARLQEKD--IVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLL---AS 398
           F  +  KD  +V+W  +I   AQ      A+  + +M      + P+ FT    L   A 
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 399 SGFIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            G +     IHA+V  N   + +  V+N LI  Y+K+  +  A  +F NM  RN ++W +
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKN 516
           L+ G+ ++G   + LQ F E+    L PD  T  V L +C+    +  G    +G     
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISA 562
            ++        M+ L ++ G LD ++ +   M  K T + W AL+SA
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSA 677



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 213/449 (47%), Gaps = 22/449 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A   + G    A+ +F ++     ++PD  SL   L ACA++   + G Q+H
Sbjct: 214 LVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVH 273

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YALR+GL     V N ++ +Y     +    +VF  ++  DV SW   ++  +++G  D
Sbjct: 274 GYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFD 333

Query: 141 YACEVFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F+K+ +  + +    ++A+I G  + G     + +FR+M       +  +  S+L
Sbjct: 334 DALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLL 393

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSC-------LVSVVNALITMYFNCGNVVDACKVFEE 248
           S C  AG L  G++ H    K   +         + V+NALI MY  C +   A  +F+ 
Sbjct: 394 SGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDL 453

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACL---C 303
                   +++ V++ G A  G   EAL  F  ML     + P+  T    + AC     
Sbjct: 454 IPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGA 513

Query: 304 PRVGYQVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
            R G Q+HA  +++ FE A   V+N  I MYS  G +D A ++F  + +++ VSW ++++
Sbjct: 514 LRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMT 573

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN---GII 418
            Y     G  A+  + EMQ V + PD  TF  +L +     MV+  I+ F  +N   G++
Sbjct: 574 GYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVV 633

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNM 447
              +    ++   ++  R+ +A ++   M
Sbjct: 634 PGAEHYACMVDLLSRAGRLDEAMELIRGM 662



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 119/256 (46%), Gaps = 13/256 (5%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFL 463
           E+ H  + + G+  +      +IS Y       +A  +   + P    +  WN LI   +
Sbjct: 65  ELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSV 121

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             GF    LQ +  +     RPD YT    L +C  I S R G  +H  V  +     + 
Sbjct: 122 HLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVF 181

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           +GN ++++Y +CG  + + +VF+ M E+   D +SWN++++AY Q G+   A+  F+ M 
Sbjct: 182 VGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMT 241

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRA 638
           +   I+PD  +   VL AC+  G    G ++    +    F   ED    + ++D+  + 
Sbjct: 242 EDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLF---EDVFVGNAVVDMYAKC 298

Query: 639 GYLDEAERVINSQHIQ 654
           G ++EA +V     ++
Sbjct: 299 GMMEEANKVFERMKVK 314


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/722 (30%), Positives = 381/722 (52%), Gaps = 42/722 (5%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           T ++ L + N  L   SR+   ++AL+LF+ +  S     D  SLS  L  C  L +   
Sbjct: 52  TPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCGCLFDRIV 110

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H   ++ G      V  +++ +Y     +   +RVF E++  +V SWT        
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWT-------- 162

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                  +++ G  +NG  +  + LF +M    ++ + ++FA+V
Sbjct: 163 -----------------------SLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAV 199

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L    A G +E G Q+H++V KSG    + V N+++ MY     V DA  VF+  +    
Sbjct: 200 LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-- 257

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           + +S+N M+ G  + G   EA   F  M +  ++ ++  F +V+  C   +      Q+H
Sbjct: 258 NAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLH 317

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLG 370
            Q +K+G +   ++  A +  YS C +ID+A  +F  +   +++VSW  +IS Y Q    
Sbjct: 318 CQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRT 377

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
             A+  + +M+  G+RP+ FT+ ++L ++  +   + IHA V       +  V  AL  +
Sbjct: 378 DRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ-IHALVVKTNYENSPSVGTALSDS 436

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K     +A +IF  +  ++I+ W+ +++G+   G     ++ F +L    + P+E+T 
Sbjct: 437 YSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTF 496

Query: 491 SVALSSCA-RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           S  L++CA   +S+  GKQ H   +K+   + + + +A++T+YAK G+++ +  VF   +
Sbjct: 497 SSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQV 556

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           ++D +SWN++IS YAQHG GK+++  F+ M+    ++ D  TF  V+SAC+HAGLV++G 
Sbjct: 557 DRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS-KNLELDGITFIGVISACTHAGLVNEGQ 615

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R FD MV DY  +P  +H SCM+DL  RAG L++A  +IN     A +  W  L +AC  
Sbjct: 616 RYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRV 675

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H N++LG + A  L+  +    + YVLLSNIYA AG W+E A +R+L+    V K+ G S
Sbjct: 676 HLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 735

Query: 730 WI 731
           WI
Sbjct: 736 WI 737



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/413 (22%), Positives = 190/413 (46%), Gaps = 35/413 (8%)

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG--FI 402
           +F    ++ +   N ++  +++ +  + A+  +L ++  G   D  +   +L   G  F 
Sbjct: 48  LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107

Query: 403 EMV-EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
            +V + +H      G + ++ V  +L+  Y K E ++   ++F  M  +N+++W +L+ G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  NG   Q L+ FS++ +  ++P+ +T +  L   A   ++  G Q+H  V+K+ L S 
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + +GN+M+ +Y+K   +  +  VF+ M  ++ +SWN++I+ +  +G   EA   F  M+ 
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287

Query: 582 VGRIKPDQATFTAVLSACS-----------HAGLVDDGT----RIFDSMVNDYGFIPAED 626
            G +K  Q  F  V+  C+           H  ++ +G+     I  +++  Y      D
Sbjct: 288 EG-VKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEID 346

Query: 627 ---HLSCMLDLLGR--------AGYL-----DEAERVINSQHIQARSDNWWALFSACAAH 670
               L CM+  +          +GY+     D A  +      +    N +   +   A+
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTAN 406

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             +   +I A ++    ++ PSV   LS+ Y+  G   EAA I EL+    ++
Sbjct: 407 AAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIV 459


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 210/605 (34%), Positives = 346/605 (57%), Gaps = 17/605 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G + +A   F  +P + +  +NA++ G    G+    I  +  M +  V  DNY++  VL
Sbjct: 81  GSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVL 140

Query: 197 SVCDA-GLLEFGRQLHSLV---TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             C +   L+ GR +H  +   TK+     V V  A+I M+  CG+V DA ++FEE    
Sbjct: 141 KACSSLHALQLGRWVHETMHGKTKAN----VYVQCAVIDMFAKCGSVEDARRMFEEMPDR 196

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
             D  S+  ++ G    G   EAL+ FR M    L P  +   S++ AC      ++G  
Sbjct: 197 --DLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMA 254

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +   A++SGFE+   VSNA I MY  CG   EA  +F+ +   D+VSW+T+I+ Y+Q  L
Sbjct: 255 LQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCL 314

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            + +   Y+ M +VG+  +     S+L + G +E+++    +H FV   G+++++ V +A
Sbjct: 315 YQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSA 374

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI  YA    IK+A  IF   S ++I+ WN++I G+ L G        F  +  +E RP+
Sbjct: 375 LIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPN 434

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             T+   L  C ++ +LR GK+IHGYV K+ L   +S+GN++I +Y+KCG L+   +VF 
Sbjct: 435 FITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFK 494

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M+ ++  ++N +ISA   HG+G++ ++ ++ M++ G  +P++ TF ++LSACSHAGL+D
Sbjct: 495 QMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN-RPNKVTFISLLSACSHAGLLD 553

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            G  +++SM+NDYG  P  +H SCM+DL+GRAG LD A + I    +   ++ + +L  A
Sbjct: 554 RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGA 613

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H  + L  ++A  +L+ + D    YVLLSN+YA+   WE+ + +R ++K  G+ K+P
Sbjct: 614 CRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKP 673

Query: 727 GCSWI 731
           G SWI
Sbjct: 674 GSSWI 678



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 163/621 (26%), Positives = 276/621 (44%), Gaps = 69/621 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHS--SHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           ++  N  L  L   GH+  A+H +   HS   H + PD Y+    L AC++L     G  
Sbjct: 98  IIAWNAILRGLVAVGHFTKAIHFY---HSMLQHGVTPDNYTYPLVLKACSSLHALQLGRW 154

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H   +    KA  +V   ++ ++                                K G 
Sbjct: 155 VHE-TMHGKTKANVYVQCAVIDMF-------------------------------AKCGS 182

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V+ A  +F++MPDRDL  + A+I G   NG     + LFR+M    +  D+   AS+L  
Sbjct: 183 VEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPA 242

Query: 199 CDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           C  G LE    G  L     +SGF   + V NA+I MY  CG+ ++A +VF        D
Sbjct: 243 C--GRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHM--VYSD 298

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHA 312
            +S++ ++ G +     +E+   +  M+   L  + +   SV+ A       + G ++H 
Sbjct: 299 VVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHN 358

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K G  +   V +A I MY++CG I EA  IF    +KDI+ WN+MI  Y       S
Sbjct: 359 FVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFES 418

Query: 373 AILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A   +  +     RP+  T  S+L      G +   + IH +V  +G+  N+ V N+LI 
Sbjct: 419 AFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLID 478

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+K   ++   ++F  M  RN+ T+NT+I+    +G   +GL  + ++     RP++ T
Sbjct: 479 MYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVT 538

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLIS------KMSLGNAMITLYAKCGDLDCSLR 543
               LS+C+    L       G++L N++I+       M   + M+ L  + GDLD + +
Sbjct: 539 FISLLSACSHAGLLD-----RGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYK 593

Query: 544 -VFNMMIEKDTISWNALISAYAQHG--EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            +  M +  D   + +L+ A   H   E  E ++     + + ++K D +    +LS   
Sbjct: 594 FITRMPMTPDANVFGSLLGACRLHNKVELTELLA-----ERILQLKADDSGHYVLLSNLY 648

Query: 601 HAGLVDDGTRIFDSMVNDYGF 621
            +G   +      SM+ D G 
Sbjct: 649 ASGKRWEDMSKVRSMIKDKGL 669



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 161/329 (48%), Gaps = 6/329 (1%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           +S ++  + +Y + G +  A + F  L  K I++WN ++           AI  Y  M  
Sbjct: 67  SSFASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQ 126

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G+ PD +T+  +L +   +  +++   +H  +       N+ V  A+I  +AK   ++ 
Sbjct: 127 HGVTPDNYTYPLVLKACSSLHALQLGRWVHETMH-GKTKANVYVQCAVIDMFAKCGSVED 185

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A ++F  M  R++ +W  LI G + NG  ++ L  F ++    L PD   ++  L +C R
Sbjct: 186 ARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGR 245

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +++ G  +    +++   S + + NA+I +Y KCGD   + RVF+ M+  D +SW+ L
Sbjct: 246 LEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTL 305

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I+ Y+Q+   +E+   +  M +VG +  +    T+VL A     L+  G  + + ++ + 
Sbjct: 306 IAGYSQNCLYQESYKLYIGMINVG-LATNAIVATSVLPALGKLELLKQGKEMHNFVLKE- 363

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           G +      S ++ +    G + EAE + 
Sbjct: 364 GLMSDVVVGSALIVMYANCGSIKEAESIF 392



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 10/270 (3%)

Query: 387 PDEFTFGSL--LASSGFIEMVEMIHAFVFINGIITNI-----QVSNALISAYAKNERIKQ 439
           P  FT  S   L S   +     +HA + + G            ++ L++ Y     ++ 
Sbjct: 26  PIHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQH 85

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A+  F  +  + II WN ++ G +  G   + +  +  +L   + PD YT  + L +C+ 
Sbjct: 86  AFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSS 145

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +L+ G+ +H   +     + + +  A+I ++AKCG ++ + R+F  M ++D  SW AL
Sbjct: 146 LHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTAL 204

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I     +GE  EA+  F+ M+  G + PD     ++L AC     V  G  +    V   
Sbjct: 205 ICGTMWNGECLEALLLFRKMRSEG-LMPDSVIVASILPACGRLEAVKLGMALQVCAVRS- 262

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           GF       + ++D+  + G   EA RV +
Sbjct: 263 GFESDLYVSNAVIDMYCKCGDPLEAHRVFS 292



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 79/169 (46%), Gaps = 5/169 (2%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           TS + ++  N  +   +  G ++ A   F +I  +   +P+  ++ + L  C  +     
Sbjct: 395 TSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEH-RPNFITVVSILPICTQMGALRQ 453

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++H Y  ++GL     V N+++ +Y     L   ++VF ++   +V ++ T +SAC  
Sbjct: 454 GKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGS 513

Query: 136 MGHVDYACEVFDKMPDR-DLP---VYNAMITGCTENGYEDIGIGLFREM 180
            G  +     +++M +  + P    + ++++ C+  G  D G  L+  M
Sbjct: 514 HGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSM 562


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 212/664 (31%), Positives = 357/664 (53%), Gaps = 15/664 (2%)

Query: 79  LHAYALRAGLKA--YPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACT 134
            H  + RA + +  Y H A  +L L  + ++L  +  +  +  + N  ++  T  +S  +
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQ-TKLVSLFS 92

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G ++ A  VF+ + D+   +Y+ M+ G  +N   +  +     M   DV+   Y+F  
Sbjct: 93  KYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY 152

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L VC D   L+ G+++H  +  + F+  V  +  ++ MY  C  + DA K+F+      
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER- 211

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+N ++ G +  G  ++AL     M     RP  +T V+V+ A        VG  +
Sbjct: 212 -DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+++GF    ++S A   MYS CG ++ A +IF  + +K +VSWN+M+  Y Q    
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEP 330

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             AI  + +M   GI P   T    L   A  G +E  + +H FV    + ++I V N+L
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSL 390

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           IS Y+K +R+  A  IF+N++ R  ++WN +I G+  NG   + L  FSE+    ++PD 
Sbjct: 391 ISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T+   + + A +S  RH K IHG ++++ L   + +  A++ +Y+KCG +  + ++F+M
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDM 510

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + ++  I+WNA+I  Y  HG G+ A+  F  M+  G ++P+  T+ +V+SACSH+GLVD+
Sbjct: 511 ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDE 569

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G R F SM  DYG  P+ DH   M+DLLGRAG + EA   I +  I      + A+  AC
Sbjct: 570 GLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGAC 629

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H N+ +G   A  L E   D+   +VLL+NIYA+   W + A +R+ +++ G+ K PG
Sbjct: 630 KIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPG 689

Query: 728 CSWI 731
           CS +
Sbjct: 690 CSVV 693



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/558 (26%), Positives = 248/558 (44%), Gaps = 53/558 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +KP +Y+ +  L  C +  +   G ++H   +     A       ++++Y   R +    
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           ++F  +   D+ SW T                               +I G ++NG+   
Sbjct: 203 KMFDRMPERDLVSWNT-------------------------------IIAGFSQNGFAKK 231

Query: 173 GIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + L   M     R D+ +  +VL +  D GLL  G+ +H    ++GF+ LV++  AL  
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG+V  A  +F+         +S+N MMDG    G  E+A+  F  ML   + P+ 
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTV--VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTG 349

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T +  + AC        G  VH    +    +  SV N+ I+MYS C ++D A  IF  
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMV 405
           L  +  VSWN MI  YAQ      A+  + EM+S+G++PD FT  S+   LA        
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + IH  +  + +  NI V+ AL+  Y+K   I  A ++F  +S R++ITWN +I+G+  +
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI----SSLRHGKQI-HGYVLKNNLIS 520
           G     L  F ++    + P++ T    +S+C+        LRH K +   Y L+     
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLE----P 585

Query: 521 KMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            M    AM+ L  + G +  +   + NM I      + A++ A   H   K      KA 
Sbjct: 586 SMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIH---KNIEVGEKAA 642

Query: 580 QDVGRIKPDQATFTAVLS 597
           + +  + PD+  +  +L+
Sbjct: 643 KKLFELNPDEGGYHVLLA 660



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 246/548 (44%), Gaps = 57/548 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  S++G  + AL L +++    + +PD  +L T L A A++     G  +H
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIH 271

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YA+RAG     +++  +  +Y     + + + +F  +    V SW + +    + G  +
Sbjct: 272 GYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPE 331

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VF+KM                E G +  G+ +   +H               +  D
Sbjct: 332 KAIAVFEKM---------------LEEGIDPTGVTIMEALH---------------ACAD 361

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            G LE G+ +H  V +      +SV+N+LI+MY  C  V  A  +F    G    H+S+N
Sbjct: 362 LGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT--HVSWN 419

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS 317
            M+ G A  GRV EAL  F +M    ++P   T VSV+ A       R    +H   ++S
Sbjct: 420 AMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRS 479

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +    V+ A + MYS CG I  A  +F  + ++ +++WN MI  Y    LGR+A+  +
Sbjct: 480 CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLF 539

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISAY 431
            +M+   + P++ T+ S++++   SG ++  E +  F  +    G+  ++    A++   
Sbjct: 540 DKMKKGAVEPNDITYLSVISACSHSGLVD--EGLRHFKSMKQDYGLEPSMDHYGAMVDLL 597

Query: 432 AKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            +  RIK+A+    NM  SP  I  +  ++    ++     G +   +L   EL PDE  
Sbjct: 598 GRAGRIKEAWDFIENMPISP-GITVYGAMLGACKIHKNIEVGEKAAKKLF--ELNPDEGG 654

Query: 490 LSVAL-------SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
             V L       S  ++++ +R   +  G + K    S + L N + + Y+       S 
Sbjct: 655 YHVLLANIYASTSKWSKVAEVRKTMEKKG-LKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713

Query: 543 RVFNMMIE 550
           R++  + E
Sbjct: 714 RIYAFLEE 721


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 237/741 (31%), Positives = 387/741 (52%), Gaps = 72/741 (9%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +L + +RS  +++A+  ++++  S   +PD ++    L A + L++   G Q+HA A++ 
Sbjct: 63  ALRSRTRSNDFREAISTYIEMTVS-GARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKF 121

Query: 87  GLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           G  +    VANT++++Y                                K G +   C+V
Sbjct: 122 GYGSSSVTVANTLVNMYG-------------------------------KCGGIGDVCKV 150

Query: 146 FDKMPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           FD++ DRD   +N+ I   C    +E   +  FR M   ++   +++  SV   C + G+
Sbjct: 151 FDRITDRDQVSWNSFIAALCRFEKWEQ-ALEAFRAMQMENMELSSFTLVSVALACSNLGV 209

Query: 204 ---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
              L  G+QLH    + G     +  NAL+ MY   G V D+  +FE       D +S+N
Sbjct: 210 MHGLRLGKQLHGYSLRVGDQKTFTN-NALMAMYAKLGRVDDSKALFESFVDR--DMVSWN 266

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
            M+   +   R  EAL  FR M++  +    +T  SV+ AC       VG ++HA  +++
Sbjct: 267 TMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN 326

Query: 318 GFEAYTS-VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
                 S V +A + MY +C +++    +F  +  + I  WN MIS YA+  L   A++ 
Sbjct: 327 NDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALIL 386

Query: 377 YLEMQSV-GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYA 432
           ++EM  V G+ P+  T  S++ +    E     E IH +    G   +  V NAL+  Y+
Sbjct: 387 FIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYS 446

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---------- 482
           +  ++  +  IF +M  R+ ++WNT+I G++L+G     L    E+   E          
Sbjct: 447 RMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDN 506

Query: 483 -------LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
                   +P+  TL   L  CA ++++  GK+IH Y ++N L S +++G+A++ +YAKC
Sbjct: 507 DDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC 566

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM-QDVGR---IKPDQAT 591
           G L+ S RVFN M  K+ I+WN LI A   HG+G+EA+  FK M  + GR    KP++ T
Sbjct: 567 GCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVT 626

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F  V +ACSH+GL+ +G  +F  M +D+G  P  DH +C++DLLGRAG L+EA  ++N+ 
Sbjct: 627 FITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 686

Query: 652 HIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             +  +   W +L  AC  H N+ LG + A  LL  E +  S YVLLSNIY++AGLW +A
Sbjct: 687 PAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKA 746

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R+ +++ GV K+PGCSWI
Sbjct: 747 MEVRKNMRQMGVKKEPGCSWI 767



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 163/328 (49%), Gaps = 12/328 (3%)

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMI 408
           +   SW   + +  + N  R AI  Y+EM   G RPD F F ++L A SG   ++  E I
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 409 HAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           HA     G   +++ V+N L++ Y K   I    ++F  ++ R+ ++WN+ I        
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEK 174

Query: 468 PVQGLQHFSELLMSELRPDEYTL-SVAL--SSCARISSLRHGKQIHGYVLKNNLISKMSL 524
             Q L+ F  + M  +    +TL SVAL  S+   +  LR GKQ+HGY L+     K   
Sbjct: 175 WEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFT 233

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            NA++ +YAK G +D S  +F   +++D +SWN +IS+++Q     EA++ F+ M   G 
Sbjct: 234 NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEG- 292

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           ++ D  T  +VL ACSH   +D G  I   ++ +   I      S ++D+      ++  
Sbjct: 293 VELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESG 352

Query: 645 ERVINSQHIQARSDNWW-ALFSACAAHG 671
            RV +  HI  R    W A+ S  A +G
Sbjct: 353 RRVFD--HILGRRIELWNAMISGYARNG 378



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 141/302 (46%), Gaps = 60/302 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  ++  +R+G  + AL LF+++     L P+  ++++ + AC +    AF N+  +H Y
Sbjct: 368 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCE--AFSNKESIHGY 425

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A++ G K   +V N ++ +Y                               ++MG +D +
Sbjct: 426 AVKLGFKEDRYVQNALMDMY-------------------------------SRMGKMDIS 454

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-----------------V 185
             +FD M  RD   +N MITG   +G     + L  EM +++                  
Sbjct: 455 ETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPY 514

Query: 186 RRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           + +  +  +VL  C A   +  G+++H+   ++  +  ++V +AL+ MY  CG +  + +
Sbjct: 515 KPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRR 574

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-----PSELTFVSVMS 299
           VF E      + I++NV++      G+ EEAL  F++M+  + R     P+E+TF++V +
Sbjct: 575 VFNEMPNK--NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFA 632

Query: 300 AC 301
           AC
Sbjct: 633 AC 634


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 209/621 (33%), Positives = 332/621 (53%), Gaps = 14/621 (2%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N D +  ++ +    + G ++ A  +FDKMP++D  ++N M+ G  + G  +  + +F +
Sbjct: 4   NVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFED 63

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M     + ++ +FASVLS+C +  L EFG QLH LV   GF     V NAL+ MY   G 
Sbjct: 64  MRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQ 123

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA K+F        + +++N M+ G    G ++EA + F +M+ A + P  +TF S +
Sbjct: 124 LSDALKLFNTMPD--TNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 299 -----SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
                SA L  + G ++H   ++ G      + +A I +Y  C  +  AC IF +    D
Sbjct: 182 PSVTESASL--KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           IV    +IS Y    L   A+  +  +    + P+  T  S+L +   +  + +   +HA
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +  +G+     V +A++  YAK  R+  AYQIF  M  ++ + WN +I     NG P +
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            +  F ++    L  D  ++S ALS+CA + +L HGK IH +++K    S++   +A+I 
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALID 419

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y KCG+L  +  VF+MM EK+ +SWN++I+AY  HG  + +++ F  M + G I+PD  
Sbjct: 420 MYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDG-IQPDHV 478

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +LSAC HAG VD G + F  M  +YG     +H +C++DL GRAG L+EA   I +
Sbjct: 479 TFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKN 538

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
                    W  L  AC  HGN+ L  + +  LL+ + +    YVLLSN++A AG W   
Sbjct: 539 MPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSV 598

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             IR L+K+ GV K PG SWI
Sbjct: 599 RKIRSLMKKRGVQKVPGYSWI 619



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/555 (26%), Positives = 260/555 (46%), Gaps = 49/555 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L    + G    A+ +F  + +  + KP+  + ++ L+ CA+   + FGNQLH   +
Sbjct: 42  NVMLNGFVKCGEPNSAVKVFEDMRNC-QTKPNSITFASVLSICASEALSEFGNQLHGLVI 100

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G    P VAN ++++Y     L    ++F+ + + +V +W                  
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTW------------------ 142

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
                        N MI G  +NG+ D    LF EM    V  D+ +FAS L SV ++  
Sbjct: 143 -------------NGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESAS 189

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG---YVCDHISYN 260
           L+ G+++H  + + G +  V + +ALI +YF C +V  ACK+F+++      VC  I   
Sbjct: 190 LKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISG 249

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            +++GL +     +AL  FR +L   + P+ +T  SV+ AC       +G ++HA  +K 
Sbjct: 250 YVLNGLNN-----DALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH 304

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G +    V +A + MY+ CG++D A  IF R+ EKD V WN +I+  +Q    + AI  +
Sbjct: 305 GLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN 434
            +M   G+  D  +  + L++   +  +   + IH+F+      + +   +ALI  Y K 
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC 424

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +  A  +F  M  +N ++WN++I  +  +G     L  F ++L   ++PD  T    L
Sbjct: 425 GNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTIL 484

Query: 495 SSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKD 552
           S+C     +  G Q    + +   + ++M     ++ L+ + G L+ +     NM    D
Sbjct: 485 SACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPD 544

Query: 553 TISWNALISAYAQHG 567
              W  L+ A   HG
Sbjct: 545 DGVWGTLLGACRVHG 559



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 189/357 (52%), Gaps = 6/357 (1%)

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF     V ++ I +Y+  G I++A  +F ++  KD V WN M++ + +     SA+  +
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            +M++   +P+  TF S+L   AS    E    +H  V   G   +  V+NAL++ Y+K 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            ++  A ++F+ M   N++TWN +I GF+ NGF  +    FSE++ + + PD  T +  L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            S    +SL+ GK+IHGY+L++ +   + L +A+I +Y KC D+  + ++F      D +
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
              A+IS Y  +G   +A+  F+ + +  ++ P+  T  +VL AC+    ++ G  +  +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLE-EKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           ++  +G        S ++D+  + G LD A ++   +  +  +  W A+ + C+ +G
Sbjct: 301 ILK-HGLDERRHVGSAIMDMYAKCGRLDLAYQIFR-RMPEKDAVCWNAIITNCSQNG 355



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 72/380 (18%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G   DAL +F  +    K+ P+  +L++ L ACA L     G +LHA  L+ GL    H
Sbjct: 253 NGLNNDALEIFRWL-LEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRH 311

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V + I+ +Y     L    ++F  +   D   W   ++ C                    
Sbjct: 312 VGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNC-------------------- 351

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                      ++NG     I LFR+M +  +  D  S ++ LS C +   L  G+ +HS
Sbjct: 352 -----------SQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHS 400

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + K  F   V   +ALI MY  CGN+  A  VF+  +    + +S+N ++    S G +
Sbjct: 401 FMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREK--NEVSWNSIIAAYGSHGHL 458

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           E +L  F  ML   ++P  +TF++++SAC         HA  +  G +            
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSAC--------GHAGQVDKGIQ------------ 498

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEF 390
           Y  C  + E   I AR++      +  ++  +     GR+  L  A+  ++++   PD+ 
Sbjct: 499 YFRC--MTEEYGIPARMEH-----YACIVDLF-----GRAGRLNEAFETIKNMPFSPDDG 546

Query: 391 TFGSLLASS---GFIEMVEM 407
            +G+LL +    G +E+ E+
Sbjct: 547 VWGTLLGACRVHGNVELAEV 566


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 212/724 (29%), Positives = 377/724 (52%), Gaps = 45/724 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  +   N  +     +G Y +A+ L+ ++     +  D ++    L AC   +    G
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVL-GVSLDAFTFPCVLKACGAFKERRLG 167

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACT 134
            ++H  A++ G   +  V N ++++Y    DL   + +F    ++  D  SW + +SA  
Sbjct: 168 CEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISA-- 225

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
              HV                            G     + LFR M ++ V  + Y+F S
Sbjct: 226 ---HVG--------------------------EGESLEALSLFRRMQEVGVESNTYTFVS 256

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C+    ++ GR +H+++ KS     V V NALI MY NCG + DA +VF+      
Sbjct: 257 ALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKD 316

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
           C  +S+N ++ G+       +A+  F+DM  +  +P +++ +++++A         G +V
Sbjct: 317 C--VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEV 374

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA A+K G ++   + N+ I MY  C  +      F  + EKD++SW T+I+ YAQ    
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECH 434

Query: 371 RSAILAYLEMQSVGIRPDEFTFGS-LLASSGFI--EMVEMIHAFVFINGIITNIQVSNAL 427
             A+    ++Q   +  D    GS LLA SG    ++++ IH +V + G + +I + NA+
Sbjct: 435 LDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV-LKGGLADILIQNAI 493

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           ++ Y +   +  A  +F +++ ++I++W ++I   + NG  ++ L+ F+ L+ + + PD 
Sbjct: 494 VNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDL 553

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            TL   L + A +SSL+ GK+IHG++++     +  + N+++ +YA+CG ++ +  +FN 
Sbjct: 554 ITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNY 613

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + ++D I W ++I+A   HG GK+A+  F  M D   + PD  TF A+L ACSH+GLV +
Sbjct: 614 VKQRDLILWTSMINANGMHGCGKDAIDLFSKMTD-ENVLPDHITFLALLYACSHSGLVVE 672

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G + F+ M N+Y   P  +H +C++DLL R+  L+EA   + +  I+  ++ W AL  AC
Sbjct: 673 GKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGAC 732

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H N  LG + A  LL+   +    YVL+SN +AA G W +   +R ++K   + K+PG
Sbjct: 733 RIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPG 792

Query: 728 CSWI 731
           CSWI
Sbjct: 793 CSWI 796



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 184/644 (28%), Positives = 308/644 (47%), Gaps = 45/644 (6%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +Q   H F     +    P   + S  L  CA+ +    G QLHA+ L+           
Sbjct: 26  FQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKT---------- 75

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
                 +N  D               V+  T F+    K G    A +VFDKM +R +  
Sbjct: 76  ------QNYLD--------------SVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           +NAMI  C   G     I L++EM  L V  D ++F  VL  C A      G ++H +  
Sbjct: 116 WNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAV 175

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G+   V V NALI MY  CG++  A  +F+       D +S+N ++      G   EA
Sbjct: 176 KCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEA 235

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  FR M    +  +  TFVS + AC  P   ++G  +HA  +KS       VSNA I M
Sbjct: 236 LSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAM 295

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y++CG++++A  +F  +  KD VSWNT++S   Q ++   AI  + +MQ  G +PD+ + 
Sbjct: 296 YANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSV 355

Query: 393 GSLLASSG----FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
            +++A+SG     +  +E +HA+   +GI +N+ + N+LI  Y K   +K     F  M 
Sbjct: 356 LNMIAASGRSANLLAGME-VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            +++I+W T+I G+  N   +  L    ++ + ++  D   +   L +C+ + S +  K+
Sbjct: 415 EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE 474

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           IHGYVLK  L + + + NA++ +Y +   +D +  VF  +  KD +SW ++I+    +G 
Sbjct: 475 IHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
             EA+  F ++ +   I+PD  T  +VL A +    +  G  I   ++   GF       
Sbjct: 534 AIEALELFNSLIETN-IEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK-GFFLEGLIA 591

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHG 671
           + ++D+  R G ++ A  + N  +++ R    W ++ +A   HG
Sbjct: 592 NSLVDMYARCGTMENARNIFN--YVKQRDLILWTSMINANGMHG 633


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 217/610 (35%), Positives = 336/610 (55%), Gaps = 13/610 (2%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           LS   + G   +A +VF KMP+RD+  +N M+ G  + G+ +  + L+  M     R D 
Sbjct: 136 LSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDV 195

Query: 190 YSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           Y+F  VL  C  G+  L  GR++H+ V + G    V V+NAL+TMY  CG+V  A KVF+
Sbjct: 196 YTFPCVLRSC-GGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFD 254

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV 306
                + D IS+N M+ G       E  L  F  ML   + P+ +T  SV  A  L   +
Sbjct: 255 GMS--LTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDL 312

Query: 307 GY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            +  ++HA A+K GF    +  N+ I MYSS G++ EAC +F+R++ +D +SW  MIS Y
Sbjct: 313 DFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGY 372

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNI 421
            +      A+  Y  M+   + PD+ T  S LA+    G +++   +H      G I  I
Sbjct: 373 EKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYI 432

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+NAL+  YAK++ I++A ++F  M  +++I+W+++I GF  N    + L +F  +L +
Sbjct: 433 VVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHML-A 491

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           +++P+  T   AL++CA   SLR GK+IH +VL+  + S+  + NA++ LY KCG    +
Sbjct: 492 DVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYA 551

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              F     KD +SWN +++ +  HG G  A+S F  M + G   PD+ TF A+L  CS 
Sbjct: 552 WAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGE-HPDEVTFVALLCGCSR 610

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+V  G  +F SM   Y  +P   H +CM+DLL R G L E    IN   I   +  W 
Sbjct: 611 AGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWG 670

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL + C  H N+ LG + A ++LE E +    +VLLS++YA AG+W E + +R+ ++  G
Sbjct: 671 ALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKG 730

Query: 722 VIKQPGCSWI 731
           +    GCSW+
Sbjct: 731 LEHDYGCSWV 740



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 162/622 (26%), Positives = 290/622 (46%), Gaps = 67/622 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    ++G  ++AL L+ ++  +   +PD+Y+    L +C  + +   G ++H
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWA-GARPDVYTFPCVLRSCGGVPDLTMGREVH 218

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR GL     V N ++++Y    D+ + ++VF  +   D  SW              
Sbjct: 219 AHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISW-------------- 264

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  EN   + G+ LF  M + +V  +  +  SV     
Sbjct: 265 -----------------NAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSV--TVA 305

Query: 201 AGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           +GL   L+F +++H+L  K GF+  V+  N+LI MY + G + +AC VF   +    D +
Sbjct: 306 SGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRME--TRDAM 363

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           S+  M+ G    G  ++AL  +  M V ++ P ++T  S ++AC       VG ++H  A
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELA 423

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
              GF  Y  V+NA + MY+    I++A  +F  + +KD++SW++MI+ +   +    A 
Sbjct: 424 TSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEA- 482

Query: 375 LAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           L Y       ++P+  TF    +  A++G +   + IHA V   GI +   V NAL+  Y
Sbjct: 483 LYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLY 542

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K  +   A+  F     +++++WN ++ GF+ +G     L  F+E+L +   PDE T  
Sbjct: 543 VKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFV 602

Query: 492 VALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-I 549
             L  C+R   +  G ++ H    K +++  +     M+ L ++ G L       N M I
Sbjct: 603 ALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPI 662

Query: 550 EKDTISWNALISAYAQH-----GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAG 603
             D   W AL++    H     GE         A + V  ++P+ A +  +LS   + AG
Sbjct: 663 TPDAAVWGALLNGCRIHRNIELGE--------LAAKIVLELEPNDAGYHVLLSDLYADAG 714

Query: 604 LVDDGTRIFDSM-----VNDYG 620
           +  + +++  +M      +DYG
Sbjct: 715 MWAEVSKVRKTMRVKGLEHDYG 736



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 170/342 (49%), Gaps = 12/342 (3%)

Query: 289 PSELTFVSVMSACLCPRVGYQV-----HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           P E  +V++   C   R          HA A    F     + NA ++M    G+   A 
Sbjct: 92  PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFG--LRLGNAMLSMLVRFGETWHAW 149

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +FA++ E+D+ SWN M+  Y +      A+  Y  M   G RPD +TF  +L S G + 
Sbjct: 150 KVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVP 209

Query: 404 MVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            + M   +HA V   G+   + V NAL++ YAK   ++ A ++F  MS  + I+WN +I 
Sbjct: 210 DLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIA 269

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G   N     GL+ F  +L  E+ P+  T++    +   +S L   K+IH   +K    +
Sbjct: 270 GHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFAT 329

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            ++  N++I +Y+  G +  +  VF+ M  +D +SW A+IS Y ++G   +A+  + A+ 
Sbjct: 330 DVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY-ALM 388

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +V  + PD  T  + L+AC+  G +D G ++ + +    GFI
Sbjct: 389 EVNNVSPDDVTVASALAACASLGRLDVGIKLHE-LATSKGFI 429


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 226/730 (30%), Positives = 371/730 (50%), Gaps = 51/730 (6%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L + N  +++ SR+  Y + L +FV++ +   L PD ++    + ACA +     G 
Sbjct: 145 KKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGL 204

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H   ++  L     V+N ++S Y                                  G
Sbjct: 205 AVHGLVVKTRLVEDVFVSNALVSFYGTN-------------------------------G 233

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD----VRRDNYSFA 193
            V  A  VF  MP+R+L  +N+MI   ++NG  +    L  +M + D       D  + A
Sbjct: 234 SVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLA 293

Query: 194 SVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +VL VC     +  G+ +H L  K      V V NAL+ MY  CG + DA  +F+     
Sbjct: 294 TVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNK 353

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSAC----LCPRV 306
             + +S+N M+ G ++ G + +     R ML     LR  E+T ++ +  C    + P +
Sbjct: 354 --NVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411

Query: 307 GYQVHAQAMKSGFEAYTS-VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
             ++H  ++K  F      V+NA +  Y+ CG +  A  +F  ++ K + SWN +I  Y+
Sbjct: 412 K-ELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
           Q +  R ++ AY +M+S G+ PD FT  SLL++   I+ +++   +H  +  N +  +  
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V  +L+S Y     +  A+ +F  M  + +++WNT++NG+L NGFP + L  F ++++  
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG 590

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           ++P E ++     +C+ + SLR G++ HGY LK  L     +  ++I +YAK G +  S 
Sbjct: 591 VQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESF 650

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +VFN + E+   SWNA++  Y  HG  KEA+  F+ MQ  G   PD+ TF  VL+AC+H+
Sbjct: 651 KVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHC-PDELTFLGVLTACNHS 709

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLV +G    D M   +G  P   H +C++D+L RAG LDEA ++   +  +      W 
Sbjct: 710 GLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWN 769

Query: 663 -LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L S+C  H NL +G  IA  L   E +KP  YVLLSN+YA +G W+E   +R+ +K   
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMS 829

Query: 722 VIKQPGCSWI 731
           + K  GCSWI
Sbjct: 830 LRKDAGCSWI 839



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 156/580 (26%), Positives = 288/580 (49%), Gaps = 33/580 (5%)

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGI 174
           + + N DV   T  ++  +  G  D +  VFD +  ++L  +NA+I+  + N  Y ++  
Sbjct: 111 ARLSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLE 169

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITM 232
              + + +  +  DN++F  V+  C AG+  ++ G  +H LV K+     V V NAL++ 
Sbjct: 170 MFVKMITESGLLPDNFTFPCVVKAC-AGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSF 228

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA----SLR 288
           Y   G+V DA +VF+       + +S+N M+   +  G  EE  +    M+      +  
Sbjct: 229 YGTNGSVSDALRVFKIMPER--NLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFT 286

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P   T  +V+  C   R   VG  VH  AMK   +    V+NA + MYS CG I++A +I
Sbjct: 287 PDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVI 346

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLA---SSG 400
           F     K++VSWNTM+  ++             +M + G  +R DE T  + +       
Sbjct: 347 FKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEES 406

Query: 401 FIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
            +  ++ +H +      + N + V+NA +++YAK   +  A+++F ++  + + +WN LI
Sbjct: 407 VLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALI 466

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            G+  +  P   L  + ++  S L PD +T+   LS+C++I SL+ GK++HG +++N L 
Sbjct: 467 GGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLE 526

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
               +  ++++LY  CG+L  +  +F+ M +K  +SWN +++ Y Q+G  + A+S F+ M
Sbjct: 527 RDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQM 586

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLL 635
              G ++P + +  +V  ACS    +  G          ++ D  FI        ++D+ 
Sbjct: 587 VLYG-VQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACS-----VIDMY 640

Query: 636 GRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLR 674
            + G + E+ +V N   ++ RS  +W A+      HG  +
Sbjct: 641 AKNGSVMESFKVFNG--LKERSVASWNAMVMGYGIHGRAK 678



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 198/413 (47%), Gaps = 18/413 (4%)

Query: 204 LEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           ++ GR++H LV++S   S    +   +ITMY  CG+  D+  VF+  +    +   +N +
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKK--NLFQWNAV 154

Query: 263 MDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           +   +        L  F  M+  S L P   TF  V+ AC      +VG  VH   +K+ 
Sbjct: 155 ISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTR 214

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 VSNA ++ Y + G + +A  +F  + E+++VSWN+MI  ++   L     L   
Sbjct: 215 LVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLG 274

Query: 379 EM----QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           +M      +   PD  T  ++L   A    I + + +H       +   + V+NAL+  Y
Sbjct: 275 QMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMY 334

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM--SELRPDEYT 489
           +K   I  A  IF   + +N+++WNT++ GF   G   +      ++L    +LR DE T
Sbjct: 335 SKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVT 394

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL-GNAMITLYAKCGDLDCSLRVFNMM 548
           +  A+  C   S L + K++H Y LK   +    L  NA +  YAKCG L  + RVF  +
Sbjct: 395 ILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSI 454

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             K   SWNALI  Y+Q  + + ++  +  M+  G + PD  T  ++LSACS 
Sbjct: 455 RSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLL-PDLFTVCSLLSACSQ 506



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 27/207 (13%)

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL-----------SSCARISSLRHGK 507
           ++G    G P QG+      ++ E   +E + S A             +  R   ++ G+
Sbjct: 46  VSGLCETGNPPQGVLQ----VIEEFDREEKSSSDAFLLLREALGLLLQASGRRKDIQLGR 101

Query: 508 QIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +IH  V ++  +S    L   +IT+Y+ CG  D S  VF+ + +K+   WNA+IS+Y+++
Sbjct: 102 KIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRN 161

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS-----HAGLVDDGTRIFDSMVNDYGF 621
                 +  F  M     + PD  TF  V+ AC+       GL   G  +   +V D  F
Sbjct: 162 ELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDV-F 220

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVI 648
           +      + ++   G  G + +A RV 
Sbjct: 221 VS-----NALVSFYGTNGSVSDALRVF 242


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 235/721 (32%), Positives = 380/721 (52%), Gaps = 54/721 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G    A+  F+ +  S  +K    +L + L+A   + N   G  +HA A+
Sbjct: 296 NVMISGHGKRGCEIVAIEYFLNMRKS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +  +V ++++S+Y                            S C KM   + A +
Sbjct: 355 KLGLASNIYVGSSLVSMY----------------------------SKCEKM---EAAAK 383

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           VF+ + +R+  ++NAMI G   NG     + LF +M       D+++F S+LS C     
Sbjct: 384 VFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHD 443

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD--HISYNV 261
           LE G Q HS++ K   +  + V NAL+ MY  CG + DA ++FE    ++CD  ++S+N 
Sbjct: 444 LEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFE----HMCDRDNVSWNT 499

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           ++ G        EA   F  M    +        S + AC        G QVH  ++K G
Sbjct: 500 IIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCG 559

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +      ++ I MYS CG I++A  +F+ + E  +VS N +I+ Y+Q NL   A++ + 
Sbjct: 560 LDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQ 618

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ-VSNALISAYAKN 434
           EM + G+ P E TF +++ +    E + +    H  +   G  +  + +  +L+  Y  +
Sbjct: 619 EMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNS 678

Query: 435 ERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
            R+ +A  +F  +S P++I+ W  +++G   NGF  + L+ + E+      PD+ T    
Sbjct: 679 RRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTV 738

Query: 494 LSSCARISSLRHGKQIHGYV--LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           L  C+ +SSLR G+ IH  +  L ++L    S  N +I +YAKCGD+  S +VF+ M  +
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKSSSQVFDEMRRR 796

Query: 552 -DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            + +SWN+LI+ YA++G  ++A+  F +M+    I PD+ TF  VL+ACSHAG V DG +
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGKVSDGRK 855

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           IF+ M+  YG     DH++CM+DLLGR GYL EA+  I +Q+++  +  W +L  AC  H
Sbjct: 856 IFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIH 915

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           G+   G I A  L+E E    S YVLLSNIYA+ G WEEA  +R+ ++  GV K PG SW
Sbjct: 916 GDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSW 975

Query: 731 I 731
           I
Sbjct: 976 I 976



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/661 (25%), Positives = 297/661 (44%), Gaps = 49/661 (7%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P+ ++ S  L+  A   N  FG Q+H   ++ GL+   +    ++ +Y     L   +RV
Sbjct: 158 PNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRV 217

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK-------------------------- 148
           F  I +P+   WT   S   K G  + A  VF++                          
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKL 277

Query: 149 ---------MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                    MP  D+  +N MI+G  + G E + I  F  M K  V+    +  SVLS  
Sbjct: 278 KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAI 337

Query: 200 D-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                L+ G  +H+   K G +  + V ++L++MY  C  +  A KVFE  +    + + 
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEER--NDVL 395

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +N M+ G A  G   + +  F DM  +     + TF S++S C       +G Q H+  +
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K        V NA + MY+ CG +++A  IF  + ++D VSWNT+I  Y Q      A  
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFD 515

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYA 432
            ++ M S GI  D     S L +   +  +   + +H      G+   +   ++LI  Y+
Sbjct: 516 LFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYS 575

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   I+ A ++F +M   ++++ N LI G+  N    + +  F E+L   + P E T + 
Sbjct: 576 KCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSEITFAT 634

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIE- 550
            + +C +  SL  G Q HG ++K    S+   LG +++ LY     +  +  +F+ +   
Sbjct: 635 IVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSP 694

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K  + W  ++S ++Q+G  +EA+  +K M+  G + PDQATF  VL  CS    + +G R
Sbjct: 695 KSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGAL-PDQATFVTVLRVCSVLSSLREG-R 752

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
              S++        E   + ++D+  + G +  + +V +    ++   +W +L +  A +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKN 812

Query: 671 G 671
           G
Sbjct: 813 G 813



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 153/580 (26%), Positives = 267/580 (46%), Gaps = 74/580 (12%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +H+ +L  G+ +   + N I+ LY     +   ++ F+ ++  DV +W + LS  + 
Sbjct: 79  GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEK-DVTAWNSMLSMYSS 137

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
           +G            P + L  +                + LF  +    +  + ++F+ V
Sbjct: 138 IGQ-----------PGKVLRSF----------------VSLFENL----IFPNKFTFSIV 166

Query: 196 LSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV- 253
           LS       +EFGRQ+H  + K G         AL+ MY  C  + DA +VF+   G V 
Sbjct: 167 LSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFD---GIVD 223

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            + + +  +  G    G  EEA+I F  M     RP  L FV+V                
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV---------------- 267

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
                           I  Y S GK+ +A ++F  +   D+V+WN MIS + +R     A
Sbjct: 268 ----------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVA 311

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           I  +L M+   ++    T GS+L++ G +  +++   +HA     G+ +NI V ++L+S 
Sbjct: 312 IEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K E+++ A ++F  +  RN + WN +I G+  NG   + ++ F ++  S    D++T 
Sbjct: 372 YSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LS+CA    L  G Q H  ++K  L   + +GNA++ +YAKCG L+ + ++F  M +
Sbjct: 432 TSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCD 491

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D +SWN +I  Y Q     EA   F  M   G I  D A   + L AC++   +  G +
Sbjct: 492 RDNVSWNTIIGGYVQDENESEAFDLFMRMNSCG-IVSDGACLASTLKACTNVHGLYQGKQ 550

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           +    V   G        S ++D+  + G +++A +V +S
Sbjct: 551 VHCLSVK-CGLDRVLHTGSSLIDMYSKCGIIEDARKVFSS 589



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/543 (22%), Positives = 239/543 (44%), Gaps = 63/543 (11%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +S    LS+ T++G   Y       +P+ D  ++  ++  C E         LF+   
Sbjct: 15  DSFSLVRRLSSSTELGRRVYG----HVLPNHD-QIHQGLLEICLEQ------CKLFKSRK 63

Query: 182 KLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
             D      + A          L  G+ +HS     G      + NA++ +Y  C  V  
Sbjct: 64  VFDEMPHRLALA----------LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSY 113

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A K F   +    D  ++N M+   +S+G+  + L  F  +    + P++ TF  V+S  
Sbjct: 114 AEKQFNSLEK---DVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTS 170

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                   G Q+H   +K G E  +    A + MY+ C ++ +A  +F  + + + V W 
Sbjct: 171 ARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWT 230

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
            + S Y +  L   A++ +  M+  G RPD   F ++                       
Sbjct: 231 CLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV----------------------- 267

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
                    I+ Y    ++K A  +F  M   +++ WN +I+G    G  +  +++F  +
Sbjct: 268 ---------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNM 318

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
             S ++    TL   LS+   +++L  G  +H   +K  L S + +G++++++Y+KC  +
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + + +VF  + E++ + WNA+I  YA +GE  + +  F  M+  G    D  TFT++LS 
Sbjct: 379 EAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLST 437

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+ +  ++ G++ F S++            + ++D+  + G L++A ++   +H+  R +
Sbjct: 438 CAVSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIF--EHMCDRDN 494

Query: 659 NWW 661
             W
Sbjct: 495 VSW 497


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 212/664 (31%), Positives = 356/664 (53%), Gaps = 15/664 (2%)

Query: 79  LHAYALRAGLKA--YPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACT 134
            H  + RA + +  Y H A  +L L  + ++L  +  +  +  + N  ++  T  +S  +
Sbjct: 34  FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQ-TKLVSLFS 92

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G ++ A  VF+ + D+   +Y+ M+ G  +N   +  +     M   DV+   Y+F  
Sbjct: 93  KYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTY 152

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L VC D   L+ G+++H  +  + F+  V  +  ++ MY  C  + DA K+F+      
Sbjct: 153 LLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER- 211

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+N ++ G +  G  ++AL     M     RP  +T V+V+ A        VG  +
Sbjct: 212 -DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSI 270

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+++GF    ++S A   MYS CG ++ A +IF  + +K +VSWN+M+  Y Q    
Sbjct: 271 HGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEP 330

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             AI  + +M   GI P   T    L   A  G +E  + +H FV    + ++I V N+L
Sbjct: 331 EKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSL 390

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           IS Y+K +R+  A  IF+N++ R  ++WN +I G+  NG   + L  FSE+    ++PD 
Sbjct: 391 ISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDS 450

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T+   + + A +S  RH K IHG ++++ L   + +  A++ +Y+KCG +  + ++F+M
Sbjct: 451 FTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDM 510

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + ++  I+WNA+I  Y  HG G+ A+  F  M+  G ++P+  T+ +V+SACSH+GLVD+
Sbjct: 511 ISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKK-GAVEPNDITYLSVISACSHSGLVDE 569

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G R F SM  DYG  P+ DH   M+DLLGRAG + EA   I +  I      + A   AC
Sbjct: 570 GLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGAC 629

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H N+ +G   A  L E   D+   +VLL+NIYA+   W + A +R+ +++ G+ K PG
Sbjct: 630 KIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPG 689

Query: 728 CSWI 731
           CS +
Sbjct: 690 CSVV 693



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/555 (26%), Positives = 246/555 (44%), Gaps = 47/555 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +KP +Y+ +  L  C +  +   G ++H   +     A       ++++Y   R +    
Sbjct: 143 VKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAY 202

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           ++F  +   D+ SW T                               +I G ++NG+   
Sbjct: 203 KMFDRMPERDLVSWNT-------------------------------IIAGFSQNGFAKK 231

Query: 173 GIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + L   M     R D+ +  +VL +  D GLL  G+ +H    ++GF+ LV++  AL  
Sbjct: 232 ALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALAD 291

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG+V  A  +F+         +S+N MMDG    G  E+A+  F  ML   + P+ 
Sbjct: 292 MYSKCGSVETARLIFDGMDQKTV--VSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTG 349

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T +  + AC        G  VH    +    +  SV N+ I+MYS C ++D A  IF  
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMV 405
           L  +  VSWN MI  YAQ      A+  + EM+S+G++PD FT  S+   LA        
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA 469

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + IH  +  + +  NI V+ AL+  Y+K   I  A ++F  +S R++ITWN +I+G+  +
Sbjct: 470 KWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN--LISKMS 523
           G     L  F ++    + P++ T    +S+C+    +  G + H   +K +  L   M 
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFKSMKQDYGLEPSMD 588

Query: 524 LGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
              AM+ L  + G +  +   + NM I      + A   A   H   K      KA + +
Sbjct: 589 HYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIH---KNIEVGEKAAKKL 645

Query: 583 GRIKPDQATFTAVLS 597
             + PD+  +  +L+
Sbjct: 646 FELNPDEGGYHVLLA 660



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 244/548 (44%), Gaps = 57/548 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  S++G  + AL L +++    + +PD  +L T L A A++     G  +H
Sbjct: 213 LVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ-RPDSITLVTVLPAAADVGLLMVGKSIH 271

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YA+RAG     +++  +  +Y     + + + +F  +    V SW + +    + G  +
Sbjct: 272 GYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPE 331

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VF+KM                E G +  G+ +   +H               +  D
Sbjct: 332 KAIAVFEKM---------------LEEGIDPTGVTIMEALH---------------ACAD 361

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            G LE G+ +H  V +      +SV+N+LI+MY  C  V  A  +F    G    H+S+N
Sbjct: 362 LGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT--HVSWN 419

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS 317
            M+ G A  GRV EAL  F +M    ++P   T VSV+ A       R    +H   ++S
Sbjct: 420 AMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRS 479

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +    V+ A + MYS CG I  A  +F  + ++ +++WN MI  Y    LGR+A+  +
Sbjct: 480 CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLF 539

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISAY 431
            +M+   + P++ T+ S++++   SG ++  E +  F  +    G+  ++    A++   
Sbjct: 540 DKMKKGAVEPNDITYLSVISACSHSGLVD--EGLRHFKSMKQDYGLEPSMDHYGAMVDLL 597

Query: 432 AKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            +  RIK+A+    NM  SP  I  +        ++     G +   +L   EL PDE  
Sbjct: 598 GRAGRIKEAWDFIENMPISP-GITVYGAXXGACKIHKNIEVGEKAAKKLF--ELNPDEGG 654

Query: 490 LSVAL-------SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
             V L       S  ++++ +R   +  G + K    S + L N + + Y+       S 
Sbjct: 655 YHVLLANIYASTSKWSKVAEVRKTMEKKG-LKKTPGCSVVELRNEVHSFYSGSTTHPQSK 713

Query: 543 RVFNMMIE 550
           R++  + E
Sbjct: 714 RIYAFLEE 721


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 208/610 (34%), Positives = 330/610 (54%), Gaps = 11/610 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRD 188
           L    K G +  A  +FDKM  RD   +  +I G          + LF  M      +RD
Sbjct: 64  LKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRD 123

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +  +  L  C  G+ + FG  LH    KSG    V V +ALI MY   G +   C+VFE
Sbjct: 124 QFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFE 183

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
             K    + +S+  ++ GL   G   E L+ F +M  + +     TF   + A     + 
Sbjct: 184 --KMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLL 241

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H Q +K GF+  + V N   TMY+ CGK D    +F +++  D+VSW T+ISTY
Sbjct: 242 HHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTY 301

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNI 421
            Q      A+ A+  M+   + P+++TF ++++S   +      E IH  V   G++  +
Sbjct: 302 VQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNAL 361

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+N++I+ Y+K   +K A  +FH ++ ++II+W+T+I+ +   G+  +   + S +   
Sbjct: 362 SVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRRE 421

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P+E+ LS  LS C  ++ L  GKQ+H ++L   +  +  + +A+I++Y+KCG +  +
Sbjct: 422 GPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEA 481

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++FN M   D ISW A+I+ YA+HG  +EA++ F+ +  VG +KPD   F  VL+AC+H
Sbjct: 482 SKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVG-LKPDYVMFIGVLTACNH 540

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+VD G   F  M N Y   P+++H  C++DLL RAG L EAE +I S         W 
Sbjct: 541 AGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWS 600

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HG++  GR  A  LL+ + +    ++ L+NIYAA G W+EAA+IR+L+K  G
Sbjct: 601 TLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKG 660

Query: 722 VIKQPGCSWI 731
           VIK+ G SW+
Sbjct: 661 VIKERGWSWV 670



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 306/682 (44%), Gaps = 101/682 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF  +      + D + +S  L ACA   N  FG  LH +++++GL     V++ +
Sbjct: 106 EALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSAL 165

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + +Y                                K+G ++  C VF+KM  R++  + 
Sbjct: 166 IDMY-------------------------------MKVGKIEQGCRVFEKMMTRNVVSWT 194

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS 217
           A+I G    GY   G+  F EM +  V  D+++FA  L    D+ LL  G+ +H+   K 
Sbjct: 195 AIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQ 254

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V+N L TMY  CG      ++FE+ +  + D +S+  ++     +G  E A+ 
Sbjct: 255 GFDESSFVINTLATMYNKCGKPDYVMRLFEKMR--MPDVVSWTTLISTYVQMGEEEHAVE 312

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F+ M  + + P++ TF +V+S+C      + G Q+H   ++ G     SV+N+ IT+YS
Sbjct: 313 AFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYS 372

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG +  A ++F  +  KDI+SW+T+IS Y+Q    + A      M+  G +P+EF   S
Sbjct: 373 KCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 432

Query: 395 LLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L+  G + ++E    +HA +   GI     V +A+IS Y+K   +++A +IF+ M   +
Sbjct: 433 VLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIND 492

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           II+W  +ING+  +G+  + +  F ++    L+PD       L++C     +  G   + 
Sbjct: 493 IISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLG--FYY 550

Query: 512 YVLKNNLI----SKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISA---- 562
           ++L  N+     SK   G  +I L  + G L  +  +  +M    D + W+ L+ A    
Sbjct: 551 FMLMTNVYRISPSKEHYG-CLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVH 609

Query: 563 ------------------------------YAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
                                         YA  G  KEA    K M+  G IK    ++
Sbjct: 610 GDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSW 669

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
                       V+D    F  +  D    P  +H++ +L LL  +  + +A++ I S H
Sbjct: 670 VN----------VNDQLNAF--VAGDQAH-PQSEHITTVLKLL--SANIGDAQQEIRSLH 714

Query: 653 IQARSDNWWALFSACAAHGNLR 674
                      +S   +HGN R
Sbjct: 715 EDVED----LAYSCILSHGNAR 732



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 12/378 (3%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGI 385
           N+ +      G++ +A  +F ++  +D +SW T+I+ Y   +    A++ +  M    G 
Sbjct: 61  NSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGP 120

Query: 386 RPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           + D+F     L +      I   E++H F   +G+I ++ VS+ALI  Y K  +I+Q  +
Sbjct: 121 QRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCR 180

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  RN+++W  +I G +  G+ ++GL +FSE+  S++  D +T ++AL + A  S 
Sbjct: 181 VFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSL 240

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L HGK IH   +K        + N + T+Y KCG  D  +R+F  M   D +SW  LIS 
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLIST 300

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y Q GE + AV  FK M+    + P++ TF AV+S+C++      G +I   ++   G +
Sbjct: 301 YVQMGEEEHAVEAFKRMRK-SYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLR-LGLV 358

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIA 680
            A    + ++ L  + G L  A  V    H   R D  +W  + S  +  G  +      
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVF---HGITRKDIISWSTIISVYSQGGYAKEAFDYL 415

Query: 681 GLLLEREQDKPSVYVLLS 698
              + RE  KP+ + L S
Sbjct: 416 S-WMRREGPKPNEFALSS 432



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 216/478 (45%), Gaps = 45/478 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A L  +G+  + L  F ++  S K+  D ++ +  L A A+      G  +H   ++ G
Sbjct: 197 IAGLVHAGYNMEGLLYFSEMWRS-KVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQG 255

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V NT+ ++Y        V R+F +++ PDV SWTT +S   +MG  ++A E   
Sbjct: 256 FDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEA-- 313

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                                        F+ M K  V  + Y+FA+V+S C +    ++
Sbjct: 314 -----------------------------FKRMRKSYVSPNKYTFAAVISSCANLAAAKW 344

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H  V + G    +SV N++IT+Y  CG +  A  VF        D IS++ ++   
Sbjct: 345 GEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRK--DIISWSTIISVY 402

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  G  +EA      M     +P+E    SV+S C        G QVHA  +  G +   
Sbjct: 403 SQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEA 462

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I+MYS CG + EA  IF  ++  DI+SW  MI+ YA+    + AI  + ++ SV
Sbjct: 463 MVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSV 522

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA----LISAYAKNERIKQ 439
           G++PD   F  +L +     MV++   +  +   +  I  S      LI    +  R+ +
Sbjct: 523 GLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSE 582

Query: 440 AYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           A  I  +M    + + W+TL+    ++G   +G     +LL  +L P+     + L++
Sbjct: 583 AEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLL--QLDPNSAGTHITLAN 638



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 6/228 (2%)

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + N+   N+ +    K  ++ +A  +F  M+ R+ I+W TLI G++      + L  FS 
Sbjct: 54  VHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSN 113

Query: 478 LLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           + +    + D++ +SVAL +CA   ++  G+ +HG+ +K+ LI  + + +A+I +Y K G
Sbjct: 114 MWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVG 173

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            ++   RVF  M+ ++ +SW A+I+     G   E +  F  M    ++  D  TF   L
Sbjct: 174 KIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWR-SKVGYDSHTFAIAL 232

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAE---DHLSCMLDLLGRAGYL 641
            A + + L+  G  I    +   GF  +    + L+ M +  G+  Y+
Sbjct: 233 KASADSSLLHHGKAIHTQTIKQ-GFDESSFVINTLATMYNKCGKPDYV 279


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 214/662 (32%), Positives = 354/662 (53%), Gaps = 42/662 (6%)

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H  A ++G+ ++ +VAN IL  Y          + FS                    G +
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYS---------KCFS--------------------GDL 52

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-V 198
           + AC++FD+MP +D   +N MITG  E+G         + M +   + D Y+F S+L  V
Sbjct: 53  NLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGV 112

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             A   + G+Q+HSL+ K G+   V   +AL+ MY  C  V DA  VF+     V + +S
Sbjct: 113 AHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMP--VRNFVS 170

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAM 315
           +N ++DG   VG  + A      M    +R  + TF   ++++      ++  Q+H + +
Sbjct: 171 WNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKII 230

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           K G E Y ++ NA +T YS CG +++A  +F   +  +D+V+WN+M+  Y   +    A 
Sbjct: 231 KHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAF 290

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             +LEMQ  G  PD +T+  ++++   +      +  HA V   G+  ++ + NALI+ Y
Sbjct: 291 NLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMY 350

Query: 432 AK--NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            K  N+ ++ A  +FH+M  ++ ++WN+++ GF   GF    L+ F  +  S    D+Y 
Sbjct: 351 LKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYA 410

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            S  L SC+ ++ L+ G+QIH   +K    S   + +++I +Y+KCG ++ + + F    
Sbjct: 411 YSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTT 470

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           ++ +I+WN+++ AYAQHG+G  A+  F  M++   +K D  TF AVL+ACSH GLV+ G 
Sbjct: 471 KESSITWNSIMFAYAQHGQGDVALDLFSIMRE-REVKLDHVTFVAVLTACSHVGLVEQGR 529

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            +  SM +DYG  P  +H +C +DL GRAGYL+EA+ +I+S   Q  +     L  AC A
Sbjct: 530 CVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRA 589

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            GN+ L   +A  LLE E ++   YV+LSN+Y     W++ A++  L++   V K PG S
Sbjct: 590 CGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWS 649

Query: 730 WI 731
           WI
Sbjct: 650 WI 651



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 165/300 (55%), Gaps = 11/300 (3%)

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSC--GKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +  H QA KSG  ++  V+N  +  YS C  G ++ AC +F  +  KD V+WNTMI+ Y 
Sbjct: 19  FLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYV 78

Query: 366 QR-NLGRSAILAYLE-MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
           +  NLG  A   +L+ M+  G + D +TFGS+L   A +   ++ + +H+ +   G   +
Sbjct: 79  ESGNLG--AAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQS 136

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           +   +AL+  YAK ER++ AY +F  M  RN ++WN LI+GF+  G           +  
Sbjct: 137 VYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQK 196

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             +R ++ T +  L+        +   Q+H  ++K+ L    +L NA +T Y++CG L+ 
Sbjct: 197 EGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLED 256

Query: 541 SLRVFNMMI-EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           + RVF+  +  +D ++WN+++ AY  H + ++A + F  MQ  G  +PD  T+T V+SAC
Sbjct: 257 AKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFG-FEPDIYTYTCVISAC 315



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 87/362 (24%), Positives = 169/362 (46%), Gaps = 48/362 (13%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           +DA +LF+++      +PDIY+ +  ++AC    +  +G   HA  ++ GL+    + N 
Sbjct: 287 EDAFNLFLEMQG-FGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNA 345

Query: 98  ILSLY--KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           ++++Y   N + + +   +F  +++ D  SW + L+  ++MG  + A ++F  M      
Sbjct: 346 LITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHM------ 399

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
                      +  E+I               D+Y++++VL  C D  +L+ G+Q+H L 
Sbjct: 400 ----------RSSLEEI---------------DDYAYSAVLRSCSDLAILQLGQQIHLLT 434

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            K+GF     V ++LI MY  CG + DA K FE+        I++N +M   A  G+ + 
Sbjct: 435 VKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKE--SSITWNSIMFAYAQHGQGDV 492

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN------A 328
           AL  F  M    ++   +TFV+V++A  C  VG     + +    E+   +         
Sbjct: 493 ALDLFSIMREREVKLDHVTFVAVLTA--CSHVGLVEQGRCVLKSMESDYGIPPRMEHYAC 550

Query: 329 AITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A+ ++   G ++EA  +I +   + + +   T++   A R  G   + A +  Q + + P
Sbjct: 551 AVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLG--ACRACGNIELAAQVASQLLEVEP 608

Query: 388 DE 389
           +E
Sbjct: 609 EE 610



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 38/249 (15%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAK--NERIKQAYQIFHNMSPRNIITWNTLINGF 462
           V + H   F +GII++I V+N ++  Y+K  +  +  A ++F  M  ++ +TWNT+I G+
Sbjct: 18  VFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGY 77

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + +G      +    +     + D YT    L   A       G+Q+H  ++K      +
Sbjct: 78  VESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSV 137

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
             G+A++ +YAKC  ++ +  VF  M  ++ +SWNALI  + Q G+   A      MQ  
Sbjct: 138 YAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKE 197

Query: 583 GRIKPDQATF-----------------------------------TAVLSACSHAGLVDD 607
           G ++ +  TF                                    A L+A S  GL++D
Sbjct: 198 G-VRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSECGLLED 256

Query: 608 GTRIFDSMV 616
             R+FD  V
Sbjct: 257 AKRVFDGAV 265



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 12/228 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L   S+ G  +DAL LF  + SS + + D Y+ S  L +C++L     G Q+H   +
Sbjct: 377 NSILTGFSQMGFSEDALKLFGHMRSSLE-EIDDYAYSAVLRSCSDLAILQLGQQIHLLTV 435

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   VA++++ +Y     +    + F +       +W + + A  + G  D A +
Sbjct: 436 KTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALD 495

Query: 145 VFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLS 197
           +F  M +R++ +    + A++T C+  G  + G  + + M   + +  R ++Y+ A  L 
Sbjct: 496 LFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDL- 554

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              AG LE   +  +L+    F     V+  L+     CGN+  A +V
Sbjct: 555 FGRAGYLE---EAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQV 599


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 217/683 (31%), Positives = 359/683 (52%), Gaps = 47/683 (6%)

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYP---HVANTILSLYKNARDLVSVKRVFSEI 118
           + L  C + ++     Q+HA+ +  GL + P   H+ +++ + Y         +++F E+
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           +NP ++SW                               NAMI   T +G     +GLF 
Sbjct: 83  RNPSLFSW-------------------------------NAMIRMYTNSGLSYDALGLFV 111

Query: 179 EMHKLDVR-RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           +M     R  DNY++  V+  C D  L E G  +H+    SGF     V N+L+ MY NC
Sbjct: 112 QMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNC 171

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A +VF+  +      +S+N M++G    G V+EAL+ F  M+   + P   T VS
Sbjct: 172 GEMEVARRVFDLMRERTL--VSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVS 229

Query: 297 VMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+  C   +   VG +VHA           SV N+ + MY+ CG +DEA MIF  + ++D
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           +VSW TM++ Y      RSA+L    MQ   ++P+  T  S+L++   +  ++    +H 
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +     + + + V  ALI  YAK   +  ++++F   S +    WN +I+G + NG   +
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRK 409

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ F ++LM  + P++ TL+  L + A ++ L+  + +HGY++++  +S++ +   +I 
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469

Query: 531 LYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +Y+KCG L+ +  +FN +   +KD I+W+A+I+ Y  HG G+ A+S F  M   G +KP+
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSG-VKPN 528

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           + TFT++L ACSHAGLVD+G  +F  M+ D       DH +C++DLLGRAG L+EA  +I
Sbjct: 529 EITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELI 588

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
            +   +     W AL  +C  H N+ LG + A  L E E      YVLL+NIY+A G W 
Sbjct: 589 RTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWR 648

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +A ++R ++   G+ K P  S I
Sbjct: 649 DAEHVRLMMNNIGLRKTPAHSLI 671



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 262/557 (47%), Gaps = 44/557 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   + SG   DAL LFVQ+ +S +  PD Y+    + AC +      G  +H
Sbjct: 87  LFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIH 146

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  + +G  +   V N+++++Y N                                G ++
Sbjct: 147 ARTVMSGFDSDAFVQNSLMAMYMNC-------------------------------GEME 175

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VFD M +R L  +N MI G  +NG     + +F  M    +  D  +  SVL VC 
Sbjct: 176 VARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCS 235

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               LE GR++H+LV        +SV N+L+ MY  CGN+ +A  +F E      D +S+
Sbjct: 236 YLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR--DVVSW 293

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             MM+G    G    AL+  + M   S++P+ +T  SV+SAC      + G  +H  A++
Sbjct: 294 TTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIR 353

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              E+   V  A I MY+ C  ++ +  +F++  ++    WN +IS      L R AI  
Sbjct: 354 QKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIEL 413

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M    + P++ T  SLL +  F   ++    +H ++  +G ++ I+V+  LI  Y+K
Sbjct: 414 FKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSK 473

Query: 434 NERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
              ++ A+ IF+ +    ++IITW+ +I G+ ++G     +  F +++ S ++P+E T +
Sbjct: 474 CGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFT 533

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-I 549
             L +C+    +  G  +  ++L++N +S +      +I L  + G L+ +  +   M  
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAF 593

Query: 550 EKDTISWNALISAYAQH 566
             +   W AL+ +   H
Sbjct: 594 RPNHAVWGALLGSCVIH 610


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 216/717 (30%), Positives = 381/717 (53%), Gaps = 45/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++ S+SG   +   L+  +     L P   + ++ L+A A++     G Q+HA A+
Sbjct: 296 NAVISSYSQSGLESEVFGLYKDM-KRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAV 354

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL A   V +++++LY                                K G +  A +
Sbjct: 355 KHGLDANVFVGSSLINLY-------------------------------VKHGCISDAKK 383

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           VFD   ++++ ++NAM+ G  +N  ++  I +F+ M + D+  D+++F SVL  C +   
Sbjct: 384 VFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDS 443

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ GRQ+H +  K+     + V NA++ MY   G +  A  +F    G   D +S+N ++
Sbjct: 444 LDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGK--DSVSWNALI 501

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            GLA     EEA+   + M    + P E++F + ++AC   R    G Q+H  ++K    
Sbjct: 502 VGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVC 561

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  +V ++ I +YS  G ++ +  + A +    +V  N +I+   Q N    AI  + ++
Sbjct: 562 SNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQV 621

Query: 381 QSVGIRPDEFTFGSLLAS-SGFIEMV--EMIHAFVFINGIIT-NIQVSNALISAYAKNER 436
              G +P  FTF S+L+  +G +  V  + +H++   + ++  +  +  +L+  Y K + 
Sbjct: 622 LKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKL 681

Query: 437 IKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           ++ A ++   +   +N++ W   I+G+  NG+  Q L  F  +   ++R DE T +  L 
Sbjct: 682 LEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLK 741

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI- 554
           +C+ I++L  GK+IHG ++K+  +S  +  +A++ +Y+KCGD+  S  +F  +  K  I 
Sbjct: 742 ACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIM 801

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
            WN++I  +A++G   EA+  F+ MQ+  ++KPD+ T   VL ACSHAGL+ +G  +FDS
Sbjct: 802 PWNSMIVGFAKNGYANEALLLFQKMQE-SQLKPDEVTLLGVLIACSHAGLISEGRNLFDS 860

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M   YG +P  DH +C++DLLGR G+L EA+ VI+    +A    W    +AC  H +  
Sbjct: 861 MSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEE 920

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G++ A  L+E E  + S YV LS+++AAAG W EA   RE ++  GV+K PGCSWI
Sbjct: 921 RGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWI 977



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 196/732 (26%), Positives = 337/732 (46%), Gaps = 59/732 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RSG  +D L  F ++  S    PD + L+  L+AC+ L     G Q+H   L++G  + 
Sbjct: 135 ARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSS 194

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW------------------------- 126
                 ++ +Y    ++   +RVF  I  PD   W                         
Sbjct: 195 AFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEK 254

Query: 127 ----------TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                      T +S    MG +  A  +  ++       +NA+I+  +++G E    GL
Sbjct: 255 MGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGL 314

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +++M +  +     +FAS+LS   A +  F  G+Q+H+   K G    V V ++LI +Y 
Sbjct: 315 YKDMKRQGLMPTRSTFASMLSAA-ASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYV 373

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G + DA KVF+ +     + + +N M+ G       EE +  F+ M  A L   + TF
Sbjct: 374 KHGCISDAKKVFDFSTEK--NIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTF 431

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           VSV+ AC+      +G QVH   +K+  +A   V+NA + MYS  G ID A  +F+ +  
Sbjct: 432 VSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPG 491

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MI 408
           KD VSWN +I   A       A+     M+  GI PDE +F + + +   I   E    I
Sbjct: 492 KDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H       + +N  V ++LI  Y+K   ++ + ++  ++   +++  N LI G + N   
Sbjct: 552 HCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNRE 611

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNA 527
            + ++ F ++L    +P  +T +  LS C    S   GKQ+H Y LK+ L+++  SLG +
Sbjct: 612 DEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGIS 671

Query: 528 MITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +Y KC  L+ + ++   + + K+ + W A IS YAQ+G   +++  F  M+    ++
Sbjct: 672 LVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRS-HDVR 730

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
            D+ATF +VL ACS    + DG  I   ++   GF+  E   S ++D+  + G +  +  
Sbjct: 731 SDEATFASVLKACSEIAALTDGKEIHGLIIKS-GFVSYETAASALMDMYSKCGDVISSFE 789

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD---KPSVYVLLSNIYAA 703
           +      +     W ++    A +G        A LL ++ Q+   KP    LL  + A 
Sbjct: 790 IFKELKNKQNIMPWNSMIVGFAKNGYANE----ALLLFQKMQESQLKPDEVTLLGVLIAC 845

Query: 704 --AGLWEEAANI 713
             AGL  E  N+
Sbjct: 846 SHAGLISEGRNL 857



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 112/496 (22%), Positives = 214/496 (43%), Gaps = 65/496 (13%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH+ V + G      + +AL+ +Y   G V  A +      G      + + ++   A  
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 270 GRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
           G   + L  F+ +  +    P +     V+SAC        G QVH   +KSGF +    
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
               + MY+ C ++ +A  +F  +   D + W +MI+ Y +    + A+  +  M+ +G 
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            PD+ T+ +                                +IS  A   R+  A  +  
Sbjct: 258 APDQVTYVT--------------------------------IISTLASMGRLSDARTLLK 285

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            +   + + WN +I+ +  +G   +    + ++    L P   T +  LS+ A +++   
Sbjct: 286 RIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDE 345

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G+QIH   +K+ L + + +G+++I LY K G +  + +VF+   EK+ + WNA++  + Q
Sbjct: 346 GQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQ 405

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF-----DSMVNDYG 620
           +   +E +  F+ M+    ++ D  TF +VL AC +   +D G ++      +SM  D  
Sbjct: 406 NDLQEETIQMFQYMRRAD-LEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADL- 463

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F+      + MLD+  + G +D A+                ALFS      ++    +I 
Sbjct: 464 FVA-----NAMLDMYSKLGAIDVAK----------------ALFSLIPGKDSVSWNALIV 502

Query: 681 GLLLEREQDKPSVYVL 696
           G L   E+++ +VY+L
Sbjct: 503 G-LAHNEEEEEAVYML 517



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 111/209 (53%), Gaps = 4/209 (1%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH--NMSPRNIITWNTLINGFLL 464
           ++HA V   G+    ++ +AL+  Y ++ R+  A++       +P +    +++++    
Sbjct: 77  VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136

Query: 465 NGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
           +G P   L  F  L  S    PD++ L+V LS+C+R+ +L  G+Q+H  VLK+   S   
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
               ++ +YAKC ++  + RVF+ +   DTI W ++I+ Y + G  ++A++ F  M+ +G
Sbjct: 197 CQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMG 256

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIF 612
              PDQ T+  ++S  +  G + D   + 
Sbjct: 257 S-APDQVTYVTIISTLASMGRLSDARTLL 284



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 83/168 (49%), Gaps = 6/168 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L++   +++  +++G+   +L +F ++ S H ++ D  + ++ L AC+ +     G ++H
Sbjct: 698 LVEWTATISGYAQNGYSDQSLVMFWRMRS-HDVRSDEATFASVLKACSEIAALTDGKEIH 756

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFLSACTKMGHV 139
              +++G  +Y   A+ ++ +Y    D++S   +F E++N  ++  W + +    K G+ 
Sbjct: 757 GLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYA 816

Query: 140 DYACEVFDKMPDRDLPVYNAMITG----CTENGYEDIGIGLFREMHKL 183
           + A  +F KM +  L      + G    C+  G    G  LF  M ++
Sbjct: 817 NEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQV 864


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 219/707 (30%), Positives = 362/707 (51%), Gaps = 44/707 (6%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G ++ ++ +F ++    +++ D  + +  L AC  + +   G Q+H  A++ G  +  
Sbjct: 147 QNGFHRKSIEIFTKMRLL-EIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDV 205

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                ++ +Y                            S C K+   D+A  +F +MP+R
Sbjct: 206 VTGTALVDMY----------------------------STCKKL---DHAFNIFCEMPER 234

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQL 210
           +   ++A+I G   N     G+ L++ M    +     +FAS    C AGL   E G QL
Sbjct: 235 NSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSC-AGLSAFELGTQL 293

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+   K+ F     V  A + MY  C  +VDA KVF           S+N ++ G A   
Sbjct: 294 HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPT--RQSHNALIVGYARQD 351

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
           +V EAL  FR +  + L   E++    ++AC   +    G Q+H  A+K G +    V+N
Sbjct: 352 QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVAN 411

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + MY+ CG + EAC+IF  ++ KD VSWN +I+ + Q       +  ++ M    + P
Sbjct: 412 TILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEP 471

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D++TFGS++ +    + +     +H  V  +G+  +  V +A+I  Y K   + +A +I 
Sbjct: 472 DDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIH 531

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  R  ++WN++I+GF         L +FS +L   + PD +T +  L  CA ++++ 
Sbjct: 532 ERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVE 591

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GKQIHG +LK  L S + + + ++ +Y+KCG++  S  +F    ++D ++W+A+I AYA
Sbjct: 592 LGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYA 651

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG G++A+  F+ MQ +  +KP+   F +VL AC+H G VD G   F  M + YG  P 
Sbjct: 652 YHGLGEDAIKLFEEMQ-LQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQ 710

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H SCM+DLLGR+G ++EA  +I S   +A    W  L   C   GN+ +    A  LL
Sbjct: 711 MEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLL 770

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +    S YVLLSN+YA AG+W E A IR  +K   + K+PGCSWI
Sbjct: 771 QLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 190/673 (28%), Positives = 333/673 (49%), Gaps = 32/673 (4%)

Query: 49  SSHKLKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           SS+++ P    + S     C+NL+    G Q HA     G      V+N +L  Y    +
Sbjct: 29  SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLN 88

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L     VF ++   DV SW T +     +G++++A  +FD MP+RD+  +N+M++   +N
Sbjct: 89  LNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQN 148

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLV 223
           G+    I +F +M  L+++ D  +FA VL  C    D GL   G Q+H L  + GF   V
Sbjct: 149 GFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGL---GLQVHCLAIQMGFDSDV 205

Query: 224 SVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
               AL+ MY  C  +  A  +F E   +  VC    ++ ++ G     R  E L  ++ 
Sbjct: 206 VTGTALVDMYSTCKKLDHAFNIFCEMPERNSVC----WSAVIAGYVRNDRFTEGLKLYKV 261

Query: 282 MLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           ML   +  S+ TF S   +C       +G Q+HA A+K+ F     V  A + MY+ C +
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR 321

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLA 397
           + +A  +F         S N +I  YA+++    A+  +  +Q   +  DE +  G+L A
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTA 381

Query: 398 SS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
            S   G++E +++ H      G+  NI V+N ++  YAK   + +A  IF +M  ++ ++
Sbjct: 382 CSAIKGYLEGIQL-HGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN +I     N    + L  F  +L S + PD+YT    + +CA   +L +G ++HG V+
Sbjct: 441 WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI 500

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           K+ +     +G+A+I +Y KCG L  + ++   + E+ T+SWN++IS ++   +G+ A+S
Sbjct: 501 KSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALS 560

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLD 633
            F  M  VG I PD  T+  VL  C++   V+ G +I   ++     + ++ ++ S ++D
Sbjct: 561 YFSRMLQVGVI-PDNFTYATVLDICANLATVELGKQIHGQILKLQ--LHSDVYIASTIVD 617

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KP 691
           +  + G + ++ R++  +  +     W A+  A A HG   LG     L  E +    KP
Sbjct: 618 MYSKCGNMQDS-RIMFEKAPKRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKP 673

Query: 692 SVYVLLSNIYAAA 704
           +  + +S + A A
Sbjct: 674 NHTIFISVLRACA 686



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 205/462 (44%), Gaps = 52/462 (11%)

Query: 287 LRPSE-LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSC------ 336
           + P++ LTF  +   C   +    G Q HAQ   +GF     VSN  +  Y  C      
Sbjct: 33  MNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYA 92

Query: 337 -------------------------GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                    G ++ A  +F  + E+D+VSWN+M+S Y Q    R
Sbjct: 93  FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHR 152

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            +I  + +M+ + I+ D  TF  +L +   IE   +   +H      G  +++    AL+
Sbjct: 153 KSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALV 212

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y+  +++  A+ IF  M  RN + W+ +I G++ N    +GL+ +  +L   +   + 
Sbjct: 213 DMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA 272

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T + A  SCA +S+   G Q+H Y LK N      +G A + +YAKC  +  + +VFN  
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF 332

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
                 S NALI  YA+  +  EA+  F+++Q    +  D+ + +  L+ACS      +G
Sbjct: 333 PNPTRQSHNALIVGYARQDQVLEALEIFRSLQK-SYLDFDEISLSGALTACSAIKGYLEG 391

Query: 609 TRIFDSMVN---DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            ++    V    D+    A    + +LD+  + G L EA  + +   I+  + +W A+ +
Sbjct: 392 IQLHGLAVKCGLDFNICVA----NTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIA 446

Query: 666 ACA--AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           A     H    L   ++ L   R   +P  Y   S + A AG
Sbjct: 447 AHEQNEHVEETLALFVSML---RSTMEPDDYTFGSVVKACAG 485


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 217/681 (31%), Positives = 358/681 (52%), Gaps = 47/681 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYP---HVANTILSLYKNARDLVSVKRVFSEIQN 120
           L  C + ++     Q+HA+ +  GL + P   H+ +++ + Y         +++F E++N
Sbjct: 25  LQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRN 84

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P ++SW                               NAMI   T +G     +GLF +M
Sbjct: 85  PSLFSW-------------------------------NAMIRMYTNSGLSYDALGLFVQM 113

Query: 181 HKLDVR-RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                R  DNY++  V+  C D  L E G  +H+    SGF     V N+L+ MY NCG 
Sbjct: 114 LASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGE 173

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A +VF+  +      +S+N M++G    G V+EAL+ F  M+   + P   T VSV+
Sbjct: 174 MEVARRVFDLMRERTL--VSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVL 231

Query: 299 SACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
             C   +   VG +VHA           SV N+ + MY+ CG +DEA MIF  + ++D+V
Sbjct: 232 PVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVV 291

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFV 412
           SW TM++ Y      RSA+L    MQ   ++P+  T  S+L++   +  ++    +H + 
Sbjct: 292 SWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA 351

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
               + + + V  ALI  YAK   +  ++++F   S +    WN +I+G + NG   + +
Sbjct: 352 IRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAI 411

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F ++LM  + P++ TL+  L + A ++ L+  + +HGY++++  +S++ +   +I +Y
Sbjct: 412 ELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIY 471

Query: 533 AKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +KCG L+ +  +FN +   +KD I+W+A+I+ Y  HG G+ A+S F  M   G +KP++ 
Sbjct: 472 SKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSG-VKPNEI 530

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT++L ACSHAGLVD+G  +F  M+ D       DH +C++DLLGRAG L+EA  +I +
Sbjct: 531 TFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRT 590

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +     W AL  +C  H N+ LG + A  L E E      YVLL+NIY+A G W +A
Sbjct: 591 MAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDA 650

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            ++R ++   G+ K P  S I
Sbjct: 651 EHVRLMMNNIGLRKTPAHSLI 671



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 147/557 (26%), Positives = 262/557 (47%), Gaps = 44/557 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   + SG   DAL LFVQ+ +S +  PD Y+    + AC +      G  +H
Sbjct: 87  LFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIH 146

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  + +G  +   V N+++++Y N                                G ++
Sbjct: 147 ARTVMSGFDSDAFVQNSLMAMYMNC-------------------------------GEME 175

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VFD M +R L  +N MI G  +NG     + +F  M    +  D  +  SVL VC 
Sbjct: 176 VARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCS 235

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               LE GR++H+LV        +SV N+L+ MY  CGN+ +A  +F E      D +S+
Sbjct: 236 YLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKR--DVVSW 293

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             MM+G    G    AL+  + M   S++P+ +T  SV+SAC      + G  +H  A++
Sbjct: 294 TTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIR 353

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              E+   V  A I MY+ C  ++ +  +F++  ++    WN +IS      L R AI  
Sbjct: 354 QKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIEL 413

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M    + P++ T  SLL +  F   ++    +H ++  +G ++ I+V+  LI  Y+K
Sbjct: 414 FKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSK 473

Query: 434 NERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
              ++ A+ IF+ +    ++IITW+ +I G+ ++G     +  F +++ S ++P+E T +
Sbjct: 474 CGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFT 533

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-I 549
             L +C+    +  G  +  ++L++N +S +      +I L  + G L+ +  +   M  
Sbjct: 534 SILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAF 593

Query: 550 EKDTISWNALISAYAQH 566
             +   W AL+ +   H
Sbjct: 594 RPNHAVWGALLGSCVIH 610


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 232/766 (30%), Positives = 374/766 (48%), Gaps = 81/766 (10%)

Query: 12  GNSNTSKELLLKLNIS---LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA 68
           G ++T KEL    ++S   +  L ++G  ++A+ L + I     L  +  +    +  CA
Sbjct: 9   GFASTGKELDGPTSVSGGEVWRLCKAGRLREAIQL-LGIIKQRGLLVNSNTYGCVIEHCA 67

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
             R    G  +H      G++   ++ N++++ Y    D+ S +                
Sbjct: 68  KARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAE---------------- 111

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
                          +VF +M  RD+  +++MI     N +       F  M   ++  +
Sbjct: 112 ---------------QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156

Query: 189 NYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             +F S+L  C+   +LE GR++H++V   G    V+V  ALITMY  CG +  AC+VF 
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           +      + +S+  ++   A   ++ EA   +  ML A + P+ +TFVS++++C  P   
Sbjct: 217 KMTER--NVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL 274

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G ++H+   + G E    V+NA ITMY  C  + EA  IF R+ ++D++SW+ MI+ Y
Sbjct: 275 NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGY 334

Query: 365 AQRNLGRS----AILAYLE-MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           AQ           +   LE M+  G+ P++ TF S+L    + G +E    IHA +   G
Sbjct: 335 AQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMS---------------------------- 448
              +  +  A+ + YAK   I +A Q+F  M+                            
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFS 454

Query: 449 ---PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               RN+++WN +I G+  NG  V+  +  S +     +PD  T+   L +C  ++ L  
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK +H   +K  L S   +  ++I +Y+KCG +  +  VF+ M  +DT++WNA+++ Y Q
Sbjct: 515 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG+G EAV  FK M    R+ P++ T TAV+SACS AGLV +G  IF  M  D+   P +
Sbjct: 575 HGDGLEAVDLFKRMLK-ERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRK 633

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
            H  CM+DLLGRAG L EAE  I S   +     W AL  AC +H N++L    A  +LE
Sbjct: 634 QHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILE 693

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E    SVY+ LSNIYA AG W+++  +R ++   G+ K  G S I
Sbjct: 694 LEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSI 739


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 227/719 (31%), Positives = 373/719 (51%), Gaps = 44/719 (6%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLK-PDIYSLSTTLAACANLRNAAFGNQLH 80
           L  N  +   + +GH+  A+  +V++ +      PD ++L   + +CA L   + G  +H
Sbjct: 105 LPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVH 164

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A   GL +  +V + ++ +Y +A                               G + 
Sbjct: 165 RTARATGLASDVYVGSALIKMYSDA-------------------------------GLLR 193

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A + FD MP RD  ++N M+ G  + G     + LFR M       +  + A  LSVC 
Sbjct: 194 DARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA 253

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            +A LL  G QLHSL  K G    V+V N L++MY  C  + DA ++FE       D ++
Sbjct: 254 AEADLLS-GVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD--DLVT 310

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N M+ G    G ++EAL  F DML +  RP  +T VS++ A       + G +VH   +
Sbjct: 311 WNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYII 370

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++       + +A + +Y  C  +  A  ++   +  D+V  +T+IS Y    +   A+ 
Sbjct: 371 RNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQ 430

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYA 432
            +  +    I+P+  T  S+L +   I  + +   IH +V  N       V +AL+  YA
Sbjct: 431 MFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYA 490

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  R+  ++ IF  MS ++ +TWN++I+ F  NG P + L  F ++ M  ++ +  T+S 
Sbjct: 491 KCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISS 550

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           ALS+CA + ++ +GK+IHG ++K  + + +   +A+I +YAKCG+++ +LRVF  M +K+
Sbjct: 551 ALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKN 610

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            +SWN++ISAY  HG  KE+VS    MQ+ G  KPD  TF A++SAC+HAGLV++G ++F
Sbjct: 611 EVSWNSIISAYGAHGLVKESVSFLHRMQEEG-YKPDHVTFLALISACAHAGLVEEGLQLF 669

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             M  +Y   P  +H +CM+DL  R+G LD+A + I     +  +  W AL  AC  H N
Sbjct: 670 QCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRN 729

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + L  I +  L + +      YVL+SNI A AG W+  + +R L+K   ++K PG SW+
Sbjct: 730 VELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWV 788



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 156/324 (48%), Gaps = 12/324 (3%)

Query: 306 VGYQVHAQAMKSGF---EAYTSVSNAAITMYSSCGKIDEACMIFARLQEK---DIVSWNT 359
           +G Q+HA+A+ SG      + ++    + MY    +  +A  +F+ L        + WN 
Sbjct: 50  LGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNW 109

Query: 360 MISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFI 414
           +I  +        A+L Y++M        PD  T   ++   A+ G + +  ++H     
Sbjct: 110 LIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARA 169

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G+ +++ V +ALI  Y+    ++ A   F  M  R+ + WN +++G++  G     ++ 
Sbjct: 170 TGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRL 229

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  + +S   P+  TL+  LS CA  + L  G Q+H   +K  L  ++++ N ++++YAK
Sbjct: 230 FRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAK 289

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           C  LD + R+F ++   D ++WN +IS   Q+G   EA+  F  M   G  +PD  T  +
Sbjct: 290 CRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSG-ARPDSVTLVS 348

Query: 595 VLSACSHAGLVDDGTRIFDSMVND 618
           +L A +    +  G  +   ++ +
Sbjct: 349 LLPALTDLNGLKQGKEVHGYIIRN 372


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 222/712 (31%), Positives = 370/712 (51%), Gaps = 51/712 (7%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL--RNAAFGNQLHAYALRAGLKAYP 92
           G Y+++L +F++   + K  P+ Y LS+ + AC+ L  R      QL ++ +++G     
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF---- 179

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                                      + DVY  T  +    K G++DYA  VFD +P++
Sbjct: 180 ---------------------------DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
               +  MI+GC + G   + + LF ++ + +V  D Y  ++VLS C     LE G+Q+H
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           + + + G     S++N LI  Y  CG V+ A K+F        + IS+  ++ G      
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYKQNAL 330

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNA 328
            +EA+  F  M    L+P      S++++C        G QVHA  +K+     + V+N+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG-----RSAILAYLEMQSV 383
            I MY+ C  + +A  +F      D+V +N MI  Y++  LG       A+  + +M+  
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR--LGTQWELHEALNIFRDMRFR 448

Query: 384 GIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            IRP   TF SLL +S  +    + + IH  +F  G+  +I   +ALI  Y+    +K +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  M  ++++ WN++  G++      + L  F EL +S  RPDE+T +  +++   +
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +S++ G++ H  +LK  L     + NA++ +YAKCG  + + + F+    +D + WN++I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S+YA HGEGK+A+   + M   G I+P+  TF  VLSACSHAGLV+DG + F+ M+  +G
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEG-IEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FG 686

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H  CM+ LLGRAG L++A  +I     +  +  W +L S CA  GN+ L    A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
            + +  +      + +LSNIYA+ G+W EA  +RE +K  GV+K+PG SWIG
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 170/620 (27%), Positives = 303/620 (48%), Gaps = 29/620 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D Y     ++  ++ G + YA +VF+KMP+R+L  ++ M++ C  +G  +  + +F E  
Sbjct: 78  DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137

Query: 182 KLDVRRDN---YSFASVLSVCDAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYF 234
           +   R+D+   Y  +S +  C +GL   GR    QL S + KSGF   V V   LI  Y 
Sbjct: 138 R--TRKDSPNEYILSSFIQAC-SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             GN+  A  VF+         +++  M+ G   +GR   +L  F  ++  ++ P     
Sbjct: 195 KDGNIDYARLVFDALPEK--STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252

Query: 295 VSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+SAC + P +  G Q+HA  ++ G E   S+ N  I  Y  CG++  A  +F  +  
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMI 408
           K+I+SW T++S Y Q  L + A+  +  M   G++PD +   S+L S   +  +     +
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA+     +  +  V+N+LI  YAK + +  A ++F   +  +++ +N +I G+   G  
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432

Query: 469 V---QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               + L  F ++    +RP   T    L + A ++SL   KQIHG + K  L   +  G
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y+ C  L  S  VF+ M  KD + WN++ + Y Q  E +EA++ F  +Q + R 
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ-LSRE 551

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +PD+ TF  +++A  +   V  G   F   +   G        + +LD+  + G  ++A 
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610

Query: 646 RVINSQHIQARSDN--WWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYA 702
           +  +S    A  D   W ++ S+ A HG  +   +++  ++ E  +     +V + +  +
Sbjct: 611 KAFDS---AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667

Query: 703 AAGLWEEAANIRELLKRTGV 722
            AGL E+     EL+ R G+
Sbjct: 668 HAGLVEDGLKQFELMLRFGI 687



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 20/427 (4%)

Query: 187 RDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R    FA +L +     LL +   +H  +   G      + N LI +Y   G +V A KV
Sbjct: 42  RGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC--L 302
           FE+      + +S++ M+      G  EE+L+ F +        P+E    S + AC  L
Sbjct: 102 FEKMPER--NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL 159

Query: 303 CPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             R   + +Q+ +  +KSGF+    V    I  Y   G ID A ++F  L EK  V+W T
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTT 219

Query: 360 MISTYAQRNLGRS--AILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFI 414
           MIS   +  +GRS  ++  + ++    + PD +   ++L++     F+E  + IHA +  
Sbjct: 220 MISGCVK--MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G+  +  + N LI +Y K  R+  A+++F+ M  +NII+W TL++G+  N    + ++ 
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F+ +    L+PD Y  S  L+SCA + +L  G Q+H Y +K NL +   + N++I +YAK
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAK 397

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHG---EGKEAVSCFKAMQDVGRIKPDQAT 591
           C  L  + +VF++    D + +NA+I  Y++ G   E  EA++ F+ M+    I+P   T
Sbjct: 398 CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLT 456

Query: 592 FTAVLSA 598
           F ++L A
Sbjct: 457 FVSLLRA 463



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 213/445 (47%), Gaps = 52/445 (11%)

Query: 34  SGHYQDALH-----LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           SG+ Q+ALH     LF  + S   LKPD+Y+ S+ L +CA+L    FG Q+HAY ++A L
Sbjct: 323 SGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
               +V N+++ +Y     L   ++                               VFD 
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARK-------------------------------VFDI 410

Query: 149 MPDRDLPVYNAMITGCTENGYE---DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
               D+ ++NAMI G +  G +      + +FR+M    +R    +F S+L    A L  
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA-SASLTS 469

Query: 206 FG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            G  +Q+H L+ K G +  +   +ALI +Y NC  + D+  VF+E K  V D + +N M 
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK--VKDLVIWNSMF 527

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G       EEAL  F ++ ++  RP E TF ++++A       ++G + H Q +K G E
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               ++NA + MY+ CG  ++A   F     +D+V WN++IS+YA    G+ A+    +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
            S GI P+  TF  +L++   +G +E        +   GI    +    ++S   +  R+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRL 707

Query: 438 KQAYQIFHNMSPRN-IITWNTLING 461
            +A ++   M  +   I W +L++G
Sbjct: 708 NKARELIEKMPTKPAAIVWRSLLSG 732



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 165/308 (53%), Gaps = 7/308 (2%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH Q +  G E  T +SN  I +YS  G +  A  +F ++ E+++VSW+TM+S      +
Sbjct: 66  VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125

Query: 370 GRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIE-----MVEMIHAFVFINGIITNIQV 423
              +++ +LE  ++    P+E+   S + +   ++     MV  + +F+  +G   ++ V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
              LI  Y K+  I  A  +F  +  ++ +TW T+I+G +  G     LQ F +L+   +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD Y LS  LS+C+ +  L  GKQIH ++L+  L    SL N +I  Y KCG +  + +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           +FN M  K+ ISW  L+S Y Q+   KEA+  F +M   G +KPD    +++L++C+   
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLH 364

Query: 604 LVDDGTRI 611
            +  GT++
Sbjct: 365 ALGFGTQV 372



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L +   +HG ++   L     L N +I LY++ G +  + +VF  M E++ +SW+ ++SA
Sbjct: 60  LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDY 619
              HG  +E++  F       +  P++   ++ + ACS  GL   G  +     S +   
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKS 177

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           GF       + ++D   + G +D A  V ++   +  +  W  + S C   G
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 226/709 (31%), Positives = 368/709 (51%), Gaps = 39/709 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A   R+ +Y     LF ++ +  + KPD Y+ S+ LAACA+L    FG  + A  +
Sbjct: 42  NTIIAGALRNQNYGAVFDLFHEMCNGFQ-KPDSYTYSSVLAACASLEELRFGKVVQARVI 100

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +                                DV+  T+ +    K GH+  A E
Sbjct: 101 KCGAE--------------------------------DVFVCTSIVDLYAKCGHMAEARE 128

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF ++ +  +  +  M++G T++      + +FREM    V  ++ +  SV+S C    +
Sbjct: 129 VFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSM 188

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H+ V KSGF    SV  ALI+M    G++  + +VFE+       +I  NVM+
Sbjct: 189 VCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNI-VNVMV 247

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
              +   +  +A+  F  ML   L P E +  S++S   C  +G QVH+  +KSG     
Sbjct: 248 TSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLILDL 307

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +V ++  TMYS CG ++E+  +F  +  KD   W +MIS + +    R AI  + EM   
Sbjct: 308 TVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDE 367

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G  PDE T  ++L   +S   +   + IH +    GI   + + +AL++ Y+K   +K A
Sbjct: 368 GTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLA 427

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +++  +   + ++ ++LI+G+  +G    G   F +++MS    D Y +S  L +    
Sbjct: 428 RKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLS 487

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
                G Q+H Y+ K  L ++ S+G++++T+Y+K G ++   + F+ +   D I+W ALI
Sbjct: 488 EESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALI 547

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           ++YAQHG+  EA+  +  M++ G  KPD+ TF  VLSACSH GLV++G    +SMV DYG
Sbjct: 548 ASYAQHGKANEALQVYCLMKEKG-FKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYG 606

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P   H  CM+D LGR+G L EAE  IN++ I+  +  W  L +AC  +G++ LG++ A
Sbjct: 607 IEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAA 666

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
              +E E      YV LSNI A  G W+E    R+L+K TGV K+PG S
Sbjct: 667 KKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 715



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 171/610 (28%), Positives = 307/610 (50%), Gaps = 27/610 (4%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           ++ + A +K    + A +VF      ++  +N +I G   N        LF EM     +
Sbjct: 11  SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70

Query: 187 RDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
            D+Y+++SVL+ C A L  L FG+ + + V K G    V V  +++ +Y  CG++ +A +
Sbjct: 71  PDSYTYSSVLAAC-ASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEARE 128

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VF          +S+ VM+ G         AL  FR+M  + +  +  T  SV+SAC  P
Sbjct: 129 VFSRISNPSV--VSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRP 186

Query: 305 RV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE---KDIVSWN 358
            +     QVHA   KSGF   TSV+ A I+M S  G I+ +  +F  L +   ++IV  N
Sbjct: 187 SMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--N 244

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
            M+++++Q      AI  +  M   G+ PDEF+  SLL+    + + + +H++   +G+I
Sbjct: 245 VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLDCLNLGKQVHSYTLKSGLI 304

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            ++ V ++L + Y+K   ++++Y +F  +  ++   W ++I+GF   G+  + +  FSE+
Sbjct: 305 LDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEM 364

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L     PDE TL+  L+ C+ + SL   K+IHGY L+  +   M LG+A++  Y+KCG L
Sbjct: 365 LDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSL 424

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             + +V++ + E D +S ++LIS Y+QHG  ++    F+ M   G    D    +++L A
Sbjct: 425 KLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSG-FSMDSYAISSILKA 483

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQA 655
              +   + G ++  + +   G        S +L +  + G +++  +    IN   + A
Sbjct: 484 AVLSEESELGAQV-HAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIA 542

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAGLWEEAA-N 712
               W AL ++ A HG       +  L+ E+  + DK +   +LS   +  GL EE   +
Sbjct: 543 ----WTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSAC-SHGGLVEEGYFH 597

Query: 713 IRELLKRTGV 722
           +  ++K  G+
Sbjct: 598 LNSMVKDYGI 607



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 118/227 (51%), Gaps = 3/227 (1%)

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V ++LI A++KN R + AY++F +    N+  WNT+I G L N         F E+    
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
            +PD YT S  L++CA +  LR GK +   V+K      + +  +++ LYAKCG +  + 
Sbjct: 69  QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAR 127

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF+ +     +SW  ++S Y +  +   A+  F+ M+  G ++ +  T T+V+SAC   
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSG-VEINSCTVTSVISACGRP 186

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            +V + +++  + V   GF       + ++ +  ++G ++ +ERV  
Sbjct: 187 SMVCEASQV-HAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFE 232


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 235/768 (30%), Positives = 382/768 (49%), Gaps = 61/768 (7%)

Query: 21  LLKLNISLANLSRSGHYQD------ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           L+  N  LA  + +G   D      A H+F  +  S  L    ++LS     C    + +
Sbjct: 81  LVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR-HTLSPLFKLCLLYGSPS 139

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
               L  YA++ GL+    VA  ++++Y   + +   + +F  +   DV  W   + A  
Sbjct: 140 ASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYV 199

Query: 135 KMGHVD-------------------------------------------YACEVFDKMPD 151
           +MG  D                                           YA ++F    D
Sbjct: 200 EMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDD 259

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
            D+ V+N  ++   + G     +  FR+M K  V  D+ ++  +LSV  +   LE G+Q+
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V + G+   VSV N+ I MY   G+V  A ++F + K    D IS+N ++ G A  G
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKE--VDLISWNTVISGCARSG 377

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR----VGYQVHAQAMKSGFEAYTSVS 326
             E +L  F D+L + L P + T  SV+ AC        VG QVH  A+K+G    + VS
Sbjct: 378 LEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS 437

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A I +YS  GK++EA ++F      D+ SWN M+  +   +  R A+  +  M   G +
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497

Query: 387 PDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D+ TF +   ++G +   +  + IHA V       ++ V + ++  Y K   +K A ++
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ +   + + W T+I+G + NG   Q L  + ++ ++ ++PDEYT +  + +C+ +++L
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GKQIH  ++K N      +  +++ +YAKCG+++ +  +F  M  +    WNA+I   
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           AQHG  +EA++ F  M+  G + PD+ TF  VLSACSH+GL  D  + FDSM   YG  P
Sbjct: 678 AQHGNAEEALNFFNEMKSRG-VTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEP 736

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H SC++D L RAG++ EAE+V++S   +A +  +  L +AC   G+   G  +A  L
Sbjct: 737 EIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKL 796

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +    + YVLLSNIYAAA  WE A + R ++KR  V K+PG SWI
Sbjct: 797 FTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWI 844



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/534 (24%), Positives = 235/534 (44%), Gaps = 70/534 (13%)

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           ++ D+ L+  G++ H+++  SG +    V N LITMY  CG++  A K+F+       D 
Sbjct: 23  AIADSDLI-LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDL 81

Query: 257 ISYNVMMDGLASVG------RVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG 307
           ++YN ++   A  G      +  EA   FR +  + +  +  T   +   CL    P   
Sbjct: 82  VTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSAS 141

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +   A+K G +    V+ A + +Y+   +I EA ++F R+  +D+V WN M+  Y + 
Sbjct: 142 EALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEM 201

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFVFINGIITNIQV 423
             G   +  +      G+RPD  +  ++L   G    F   +E + A+            
Sbjct: 202 GAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAY------------ 249

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
                           A ++F      ++  WN  ++ +L  G   + +  F +++ S +
Sbjct: 250 ----------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRV 293

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
             D  T  V LS  A ++ L  GKQIHG V++      +S+ N+ I +Y K G ++ + R
Sbjct: 294 PCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARR 353

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS--- 600
           +F  M E D ISWN +IS  A+ G  + ++  F  +   G + PDQ T T+VL ACS   
Sbjct: 354 MFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL-PDQFTITSVLRACSSLE 412

Query: 601 ---------HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
                    H   +  G  + DS V+           + ++D+  + G ++EAE + ++Q
Sbjct: 413 ESYCVGRQVHTCALKAGI-VLDSFVS-----------TALIDVYSKGGKMEEAELLFHNQ 460

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
                + +W A+        N R    +  L+ ER +      +  +N   AAG
Sbjct: 461 DGFDLA-SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQ--ITFANAAKAAG 511



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 249/584 (42%), Gaps = 48/584 (8%)

Query: 107 DLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMP--DRDLPVYNAM 160
           DL+  KR  + I     NPD Y     ++   K G +  A ++FD  P  DRDL  YNA+
Sbjct: 28  DLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAI 87

Query: 161 ITGCTENG-YEDI-----GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
           +      G   D+        +FR + +  +    ++ + +  +C   G       L   
Sbjct: 88  LAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGY 147

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             K G    V V  AL+ +Y     + +A  +F+     V D + +NVMM     +G  +
Sbjct: 148 AVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP--VRDVVLWNVMMKAYVEMGAGD 205

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           E L  F     + LRP             C  V   +     K+ FE       A  T  
Sbjct: 206 EVLGLFSAFHRSGLRPD------------CVSVRTILMGVGKKTVFERELEQVRAYATKL 253

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF- 392
             C              + D+  WN  +S+Y Q   G  A+  + +M    +  D  T+ 
Sbjct: 254 FVCD------------DDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301

Query: 393 --GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
              S++AS   +E+ + IH  V   G    + V+N+ I+ Y K   +  A ++F  M   
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI-SSLRHGKQI 509
           ++I+WNT+I+G   +G     L+ F +LL S L PD++T++  L +C+ +  S   G+Q+
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H   LK  ++    +  A+I +Y+K G ++ +  +F+     D  SWNA++  +      
Sbjct: 422 HTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY 481

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           +EA+  F  M + G  K DQ TF     A      +  G +I  ++V    F      +S
Sbjct: 482 REALRLFSLMHERGE-KADQITFANAAKAAGCLVRLQQGKQI-HAVVIKMRFHYDLFVIS 539

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGN 672
            +LD+  + G +  A +V N   I +  D  W  + S C  +G 
Sbjct: 540 GILDMYLKCGEMKSARKVFN--QIPSPDDVAWTTVISGCVENGE 581


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 201/608 (33%), Positives = 333/608 (54%), Gaps = 11/608 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRD 188
           L    K  H+  A ++FD++P RD   +  +I+G   +      + LF +M  + ++R D
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +  +  L  C  GL   +G  LH    K+G    V V +AL+ MY   G +  +CKVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           E      + +++  ++ GL   G  E  L  F  M  + +      +   + A       
Sbjct: 176 EMP--TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGAL 233

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H Q +K GF+  + V+N+  TMY+ CGK+D     F +++  D+VSW T+++ Y
Sbjct: 234 NHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAY 293

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
            Q       + A+  M++  + P+E+TF +++   A+   ++  E +HA V   G +  +
Sbjct: 294 IQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNAL 353

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+N++++ Y+K   +    ++F +M  R+IITW+T+I  +   G+  +  ++ S +   
Sbjct: 354 SVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE 413

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P+E+ L+  LS C  ++ L  GKQ+H +VL   L     + +A+I +YAKCG +  +
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F    + D ISW A+IS YA+HG  +EA+  F+ +Q VG ++PD  TF  VL+ACSH
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG-LRPDSVTFIGVLTACSH 532

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+VD G   F+SM  DY   P+++H  CM+DLL RAG L +AE +I S  IQ     W 
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HG++  G+  A  +L+ + +    ++ L+NI+AA G W+EAANIR L+K  G
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652

Query: 722 VIKQPGCS 729
           V+K+PG S
Sbjct: 653 VVKEPGWS 660



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 273/563 (48%), Gaps = 49/563 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++    +L+ D + LS  L  C    N  +G  LH ++++ GL     V + +
Sbjct: 98  EALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSAL 157

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y                                K+G +  +C+VFD+MP R+   + 
Sbjct: 158 LDMY-------------------------------MKIGEIGRSCKVFDEMPTRNAVTWT 186

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS 217
           A+ITG    GY + G+  F  M +  V  D+Y++A  L    D+G L  GR +H+   K 
Sbjct: 187 AVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKK 246

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V N+L TMY  CG +      F + +    D +S+  ++     +G+ +  L 
Sbjct: 247 GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR--TLDVVSWTTIVTAYIQMGKEDCGLQ 304

Query: 278 RFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F+ M  +++ P+E TF +V+S C      + G Q+HA  +  GF    SV+N+ +T+YS
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYS 364

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG++     +F  ++ +DI++W+T+I+ Y+Q   G  A      M+S G +P+EF   S
Sbjct: 365 KCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALAS 424

Query: 395 LLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L+  G + ++E    +HA V   G+     V +ALI  YAK   I +A +IF +    +
Sbjct: 425 VLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDD 484

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           II+W  +I+G+  +G   + ++ F  +    LRPD  T    L++C+    +  G     
Sbjct: 485 IISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFN 544

Query: 512 YVLKNNLI--SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
            + K+  I  SK   G  MI L  + G L D    + +M I+ D + W+ L+ A   HG+
Sbjct: 545 SMSKDYHITPSKEHYG-CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGD 603

Query: 569 GKEAVSCF-KAMQDVGRIKPDQA 590
               V C  +A  +V ++ P+ A
Sbjct: 604 ----VDCGQRAAAEVLKLDPNCA 622



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 219/470 (46%), Gaps = 49/470 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L R+G+ +  L  F  +  S K++ D Y+ +  L A A+      G  +H   L+ G
Sbjct: 189 ITGLVRAGYSEAGLAYFSGMGRS-KVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VAN++ ++Y     L      F +++  DV SWTT ++A  +MG          
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK--------- 298

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                                 ED G+  F+ M   +V  + Y+F++V+S C +   L++
Sbjct: 299 ----------------------EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKW 336

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLH+ V   GF   +SV N+++T+Y  CG +    KVF   K    D I+++ ++   
Sbjct: 337 GEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK--FRDIITWSTIIAAY 394

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
           + VG  EEA      M     +P+E    SV+S C    +   G Q+HA  +  G E  +
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I MY+ CG I EA  IF    + DI+SW  MIS YA+    + AI  +  +Q V
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERI 437
           G+RPD  TF  +L +     MV++   F + N +  +  ++ +      +I    +  R+
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDL--GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRL 572

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
             A  +  +M  + + + W+TL+    ++G    G +  +E+L  +L P+
Sbjct: 573 HDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL--KLDPN 620



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 103/189 (54%), Gaps = 2/189 (1%)

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSE 482
           +N  +    K   +K A  +F  +  R+ ++W  +I+G++ +    + L+ FS++ L SE
Sbjct: 52  ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           LR D + LS+ L +C    +  +G  +HG+ +K  L++ + +G+A++ +Y K G++  S 
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSC 171

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +VF+ M  ++ ++W A+I+   + G  +  ++ F  M    +++ D   +   L A + +
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR-SKVEYDSYAYAIALKASADS 230

Query: 603 GLVDDGTRI 611
           G ++ G  I
Sbjct: 231 GALNHGRSI 239


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 217/707 (30%), Positives = 371/707 (52%), Gaps = 68/707 (9%)

Query: 34  SGHYQDALH--LFVQIHSSHKL--KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SG+ Q+ L     +  H  H L  K + ++ S+ L AC+ +++   G Q+H   + +G +
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VANT++ +Y    + +  KR+F EI                               
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEI------------------------------- 218

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--G 207
           P+R++  +NA+ +   +  +    +GLF EM    ++ + +S +S+++ C  GL +   G
Sbjct: 219 PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNAC-TGLRDSSRG 277

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H  + K G+       NAL+ MY   G++ DA  VFE+ K    D +S+N ++ G  
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ--PDIVSWNAVIAGCV 335

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
                E+AL                         L  ++  Q+H+  MK   E+   VS 
Sbjct: 336 LHEHHEQALE------------------------LLGQMKRQLHSSLMKMDMESDLFVSV 371

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + MYS C  +++A M F  L EKD+++WN +IS Y+Q      A+  ++EM   GI  
Sbjct: 372 GLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGF 431

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++ T  ++L S+  +++V +   +H     +G  ++I V N+LI +Y K   ++ A +IF
Sbjct: 432 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 491

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
              +  +++++ ++I  +   G   + L+ F E+   EL+PD +  S  L++CA +S+  
Sbjct: 492 EECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFE 551

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GKQ+H ++LK   +  +  GN+++ +YAKCG +D + R F+ + E+  +SW+A+I   A
Sbjct: 552 QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLA 611

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHG G++A+  F  M   G + P+  T  +VL AC+HAGLV +    F+SM   +GF P 
Sbjct: 612 QHGHGRQALQLFNQMLKEG-VSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPM 670

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
           ++H +CM+DLLGRAG ++EA  ++N    +A +  W AL  A   H ++ LGR  A +L 
Sbjct: 671 QEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLF 730

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             E +K   +VLL+NIYA+AG WE  A +R L++ + V K+PG SWI
Sbjct: 731 ILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWI 777



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 172/662 (25%), Positives = 324/662 (48%), Gaps = 67/662 (10%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P   S S  L+ C   ++   G Q+HA+  ++GL   P + N +++LY            
Sbjct: 54  PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY------------ 101

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                           S C   G   YA ++ D+  + DL  ++A+I+G  +NG     +
Sbjct: 102 ----------------SKCRXFG---YARKLVDESSEPDLVSWSALISGYAQNGLGGGAL 142

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
             F EMH L V+ + ++F+SVL  C     L  G+Q+H +V  SGF   V V N L+ MY
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C   +D+ ++F+E      + +S+N +           EA+  F +M+++ ++P+E +
Sbjct: 203 AKCDEFLDSKRLFDEIPER--NVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFS 260

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S+++AC   R    G  +H   +K G++     +NA + MY+  G + +A  +F +++
Sbjct: 261 LSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIK 320

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
           + DIVSWN +I+          A+                    LL      +M   +H+
Sbjct: 321 QPDIVSWNAVIAGCVLHEHHEQAL-------------------ELLG-----QMKRQLHS 356

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +    + +++ VS  L+  Y+K + ++ A   F+ +  +++I WN +I+G+      ++
Sbjct: 357 SLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDME 416

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F E+    +  ++ TLS  L S A +  +   +Q+HG  +K+   S + + N++I 
Sbjct: 417 ALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLID 476

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
            Y KC  ++ + R+F      D +S+ ++I+AYAQ+G+G+EA+  F  MQD+  +KPD+ 
Sbjct: 477 SYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDM-ELKPDRF 535

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             +++L+AC++    + G ++   ++  YGF+      + ++++  + G +D+A R   S
Sbjct: 536 VCSSLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAF-S 593

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWE 708
           +  +    +W A+    A HG+ R    +   +L +E   P+   L+S + A   AGL  
Sbjct: 594 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQML-KEGVSPNHITLVSVLGACNHAGLVT 652

Query: 709 EA 710
           EA
Sbjct: 653 EA 654



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 166/302 (54%), Gaps = 6/302 (1%)

Query: 285 ASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            +  P+ +++  ++S C      R G Q+HA   KSG     S+ N  I +YS C     
Sbjct: 50  GNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGY 109

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A  +     E D+VSW+ +IS YAQ  LG  A++A+ EM  +G++ +EFTF S+L +   
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169

Query: 402 IEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           ++ + +   +H  V ++G   ++ V+N L+  YAK +    + ++F  +  RN+++WN L
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNAL 229

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
            + ++   F  + +  F E+++S ++P+E++LS  +++C  +     GK IHGY++K   
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                  NA++ +YAK GDL  ++ VF  + + D +SWNA+I+    H   ++A+     
Sbjct: 290 DWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQ 349

Query: 579 MQ 580
           M+
Sbjct: 350 MK 351


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 231/766 (30%), Positives = 377/766 (49%), Gaps = 81/766 (10%)

Query: 12  GNSNTSKELLLKLNIS---LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA 68
           G ++T +EL    ++S   +  L ++G  ++A+ L + I     L  +  +    +  CA
Sbjct: 31  GFASTGEELAGPRSVSGGEVWRLCKAGRLKEAIQL-LGIIKQRGLLVNSNTYGCIIEHCA 89

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
            LR    G  +H      GL    ++ N++++ Y    D+ SV+                
Sbjct: 90  KLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE---------------- 133

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
                          +VF +M  RD+  +++MI     N +       F  M   ++  +
Sbjct: 134 ---------------QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178

Query: 189 NYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             +F S+L  C+   +LE  R++H++V  SG    V+V  ALITMY  CG +  AC++F+
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           + K    + +S+  ++   A   ++ EA   +  ML A + P+ +TFVS++++C  P   
Sbjct: 239 KMKER--NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEAL 296

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G ++H+   + G E    V+NA ITMY  C  I +A   F R+ ++D++SW+ MI+ Y
Sbjct: 297 NRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGY 356

Query: 365 AQRNL----GRSAILAYLE-MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFING 416
           AQ           +   LE M+  G+ P++ TF S+L +    G +E    IHA +   G
Sbjct: 357 AQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHN------------------------------ 446
             ++  +  A+ + YAK   I +A Q+F                                
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFS 476

Query: 447 -MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            MS RN+++WN +I G+  +G   +  +  S + +   +PD  T+   L +C  +S+L  
Sbjct: 477 EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK +H   +K  L S   +  ++I +Y+KCG++  +  VF+ +  +DT++WNA+++ Y Q
Sbjct: 537 GKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQ 596

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG G EAV  FK M    R+ P++ TFTAV+SAC  AGLV +G  IF  M  D+   P +
Sbjct: 597 HGIGPEAVDLFKRMLK-ERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGK 655

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
            H  CM+DLLGRAG L EAE  I     +     W AL  AC +H N++L    A  +L 
Sbjct: 656 QHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILR 715

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E    SVYV LSNIYA AG W+++  +R+++   G+ K  G S I
Sbjct: 716 LEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSI 761


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  364 bits (935), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 233/717 (32%), Positives = 363/717 (50%), Gaps = 72/717 (10%)

Query: 84  LRAGLKAYPHVANTILS---------LYKNARDLVSVKRVFSEIQNPDVYSW---TTFLS 131
           LRA  K++ H+  ++ S              + +  VK +  ++ +  + +    +  +S
Sbjct: 8   LRAAAKSHQHLKVSLFSTSALEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLIS 67

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
               +G + +A  +  + P  D  VY  N++I     NG  +  +  F  MH L    DN
Sbjct: 68  TYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDN 127

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           Y+F  V   C +   +  G   H+L   +GF   V V NAL+ MY  CG++ DA KVF+E
Sbjct: 128 YTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDE 187

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CP 304
               V D +S+N +++  A +G+ + AL  F  M      RP ++T V+V+  C      
Sbjct: 188 MP--VWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTR 245

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM---- 360
            +G Q H  A+ S       V N  + MY+  G +DEA  +F+ +  KD+VSWN M    
Sbjct: 246 SLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGY 305

Query: 361 -------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
                                          IS YAQR LG  A+    +M S GI+P+E
Sbjct: 306 SQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFI-------NGIITNIQVSNALISAYAKNERIKQ 439
            T  S+L   AS G +   + IH +          NG      V N LI  YAK +++  
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDI 425

Query: 440 AYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMS--ELRPDEYTLSVALS 495
           A  +F ++SP  R+++TW  +I G+  +G   + L+  SE+     + RP+ +T+S AL 
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485

Query: 496 SCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           +CA +++L  GKQIH Y L+N   +  + + N +I +YAKCGD+  +  VF+ M+EK+ +
Sbjct: 486 ACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEV 545

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           +W +L++ Y  HG G+EA+  F+ M+ +G  K D  T   VL ACSH+G++D G   F+ 
Sbjct: 546 TWTSLMTGYGMHGYGEEALGIFEEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEYFNR 604

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  D+G  P  +H +C++DLLGRAG L+ A R+I    ++     W AL S C  HG + 
Sbjct: 605 MKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVE 664

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LG   A  + E   +    Y LLSN+YA AG W++   IR L++  G+ K+PGCSW+
Sbjct: 665 LGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWV 721



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 164/634 (25%), Positives = 268/634 (42%), Gaps = 91/634 (14%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G     L  F  +HS     PD Y+      AC  + +   G+  HA +   G  +   
Sbjct: 105 NGRANKCLSSFCLMHSL-SWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVF 163

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N ++++Y     L   ++VF E+   DV SW + + +  K+G    A E+F KM +  
Sbjct: 164 VGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTN-- 221

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                       E G+                R D+ +  +VL  C   G    G+Q H 
Sbjct: 222 ------------EFGF----------------RPDDITLVNVLPPCASVGTRSLGKQFHG 253

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
               S     + V N L+ MY   G + +A  VF      V D +S+N M+ G + +GR 
Sbjct: 254 FAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMP--VKDVVSWNAMVAGYSQIGRF 311

Query: 273 EEALIRF-----------------------------------RDMLVASLRPSELTFVSV 297
           E+A+  F                                   R ML + ++P+E+T +SV
Sbjct: 312 EDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISV 371

Query: 298 MSACLCPRV---GYQVHAQAM-------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           +S C        G ++H  A+       K+G      V N  I MY+ C K+D A  +F 
Sbjct: 372 LSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFD 431

Query: 348 RL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLL---ASSG 400
            L  +E+D+V+W  MI  Y+Q      A+    EM  +    RP+ FT    L   AS  
Sbjct: 432 SLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLA 491

Query: 401 FIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
            + + + IHA+   N      + VSN LI  YAK   I  A  +F NM  +N +TW +L+
Sbjct: 492 ALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLM 551

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            G+ ++G+  + L  F E+     + D  TL V L +C+    +  G +    +  +  +
Sbjct: 552 TGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGV 611

Query: 520 SKMSLGNA-MITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           S      A ++ L  + G L+ +LR+   M +E   + W AL+S    HG+ +      K
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAK 671

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            + ++     +  ++T + +  ++AG   D TRI
Sbjct: 672 KITELA--SNNDGSYTLLSNMYANAGRWKDVTRI 703



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/472 (24%), Positives = 217/472 (45%), Gaps = 29/472 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  + + ++ G  + AL +F ++ +    +PD  +L   L  CA++   + G Q H
Sbjct: 193 VVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFH 252

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +A+ + +     V N ++ +Y     +     VFS +   DV SW   ++  +++G  +
Sbjct: 253 GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F++M +     D+  ++A I+G  + G     +G+ R+M    ++ +  +  SVL
Sbjct: 313 DAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372

Query: 197 SVC-DAGLLEFGRQLHSL-------VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           S C   G L  G+++H         + K+G      V+N LI MY  C  V  A  +F+ 
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDS 432

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSAC---LC 303
                 D +++ VM+ G +  G   +AL    +M       RP+  T    + AC     
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 304 PRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             +G Q+HA A+++   A    VSN  I MY+ CG I +A ++F  + EK+ V+W ++++
Sbjct: 493 LSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMT 552

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQ 422
            Y     G  A+  + EM+ +G + D  T   +L +     M++      + N + T+  
Sbjct: 553 GYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMID--QGMEYFNRMKTDFG 610

Query: 423 VSNA------LISAYAKNERIKQAYQIFHN--MSPRNIITWNTLINGFLLNG 466
           VS        L+    +  R+  A ++     M P  ++ W  L++   ++G
Sbjct: 611 VSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV-WVALLSCCRIHG 661


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 201/608 (33%), Positives = 332/608 (54%), Gaps = 11/608 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRD 188
           L    K  H+  A ++FD++P RD   +  +I+G   +      + LF +M  + ++R D
Sbjct: 56  LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +  +  L  C  GL   +G  LH    K G    V V +AL+ MY   G +  +CKVF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
           E      + +++  ++ GL   G  E  L  F  M  + +      +   + A       
Sbjct: 176 EMP--TRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGAL 233

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H Q +K GF+  + V+N+  TMY+ CGK+D     F +++  D+VSW T+++ Y
Sbjct: 234 NHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAY 293

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
            Q       + A+  M++  + P+E+TF +++   A+   ++  E +HA V   G +  +
Sbjct: 294 IQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNAL 353

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+N++++ Y+K   +    ++F +M  R+IITW+T+I  +   G+  +  ++ S +   
Sbjct: 354 SVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSE 413

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P+E+ L+  LS C  ++ L  GKQ+H +VL   L     + +A+I +YAKCG +  +
Sbjct: 414 GPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEA 473

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F    + D ISW A+IS YA+HG  +EA+  F+ +Q VG ++PD  TF  VL+ACSH
Sbjct: 474 SKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVG-LRPDSVTFIGVLTACSH 532

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+VD G   F+SM  DY   P+++H  CM+DLL RAG L +AE +I S  IQ     W 
Sbjct: 533 AGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWS 592

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HG++  G+  A  +L+ + +    ++ L+NI+AA G W+EAANIR L+K  G
Sbjct: 593 TLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKG 652

Query: 722 VIKQPGCS 729
           V+K+PG S
Sbjct: 653 VVKEPGWS 660



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/563 (28%), Positives = 273/563 (48%), Gaps = 49/563 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++    +L+ D + LS  L  C    N  +G  LH ++++ GL     V + +
Sbjct: 98  EALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSAL 157

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y                                K+G +  +C+VFD+MP R+   + 
Sbjct: 158 LDMY-------------------------------MKIGEIGRSCKVFDEMPTRNAVTWT 186

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS 217
           A+ITG    GY + G+  F  M +  V  D+Y++A  L    D+G L  GR +H+   K 
Sbjct: 187 AVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKK 246

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     V N+L TMY  CG +      F + +    D +S+  ++     +G+ +  L 
Sbjct: 247 GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMR--TLDVVSWTTIVTAYIQMGKEDCGLQ 304

Query: 278 RFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F+ M  +++ P+E TF +V+S C      + G Q+HA  +  GF    SV+N+ +T+YS
Sbjct: 305 AFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYS 364

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG++     +F  ++ +DI++W+T+I+ Y+Q   G  A      M+S G +P+EF   S
Sbjct: 365 KCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALAS 424

Query: 395 LLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L+  G + ++E    +HA V   G+     V +ALI  YAK   I +A +IF +    +
Sbjct: 425 VLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDD 484

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           II+W  +I+G+  +G   + ++ F  +    LRPD  T    L++C+    +  G     
Sbjct: 485 IISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFN 544

Query: 512 YVLKNNLI--SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
            + K+  I  SK   G  MI L  + G L D    + +M I+ D + W+ L+ A   HG+
Sbjct: 545 SMSKDYHITPSKEHYG-CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGD 603

Query: 569 GKEAVSCF-KAMQDVGRIKPDQA 590
               V C  +A  +V ++ P+ A
Sbjct: 604 ----VDCGQRAAAEVLKLDPNCA 622



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/470 (27%), Positives = 219/470 (46%), Gaps = 49/470 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L R+G+ +  L  F  +  S K++ D Y+ +  L A A+      G  +H   L+ G
Sbjct: 189 ITGLVRAGYSEAGLAYFSGMGRS-KVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG 247

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VAN++ ++Y     L      F +++  DV SWTT ++A  +MG          
Sbjct: 248 FDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGK--------- 298

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                                 ED G+  F+ M   +V  + Y+F++V+S C +   L++
Sbjct: 299 ----------------------EDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKW 336

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G QLH+ V   GF   +SV N+++T+Y  CG +    KVF   K    D I+++ ++   
Sbjct: 337 GEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK--FRDIITWSTIIAAY 394

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
           + VG  EEA      M     +P+E    SV+S C    +   G Q+HA  +  G E  +
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS 454

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A I MY+ CG I EA  IF    + DI+SW  MIS YA+    + AI  +  +Q V
Sbjct: 455 MVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERI 437
           G+RPD  TF  +L +     MV++   F + N +  +  ++ +      +I    +  R+
Sbjct: 515 GLRPDSVTFIGVLTACSHAGMVDL--GFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRL 572

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
             A  +  +M  + + + W+TL+    ++G    G +  +E+L  +L P+
Sbjct: 573 HDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVL--KLDPN 620



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 103/189 (54%), Gaps = 2/189 (1%)

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSE 482
           +N  +    K   +K A  +F  +  R+ ++W  +I+G++ +    + L+ FS++ L SE
Sbjct: 52  ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           LR D + LS+ L +C    +  +G  +HG+ +K  L++ + +G+A++ +Y K G++  S 
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSC 171

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +VF+ M  ++ ++W A+I+   + G  +  ++ F  M    +++ D   +   L A + +
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR-SKVEYDSYAYAIALKASADS 230

Query: 603 GLVDDGTRI 611
           G ++ G  I
Sbjct: 231 GALNHGRSI 239


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 221/730 (30%), Positives = 374/730 (51%), Gaps = 58/730 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  +++ SR+  Y + L  F+++ S+  L PD ++    + ACA + +   G  +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ GL     V N ++S Y                                  G V 
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTH-------------------------------GFVT 239

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD----VRRDNYSFASVL 196
            A ++FD MP+R+L  +N+MI   ++NG+ +    L  EM + +       D  +  +VL
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299

Query: 197 SVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            VC    + GL   G+ +H    K      + + NAL+ MY  CG + +A  +F+     
Sbjct: 300 PVCAREREIGL---GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSAC----LCPRV 306
             + +S+N M+ G ++ G         R ML     ++  E+T ++ +  C      P +
Sbjct: 357 --NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
             ++H  ++K  F     V+NA +  Y+ CG +  A  +F  ++ K + SWN +I  +AQ
Sbjct: 415 K-ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
            N  R ++ A+L+M+  G+ PD FT  SLL++   ++ + +   +H F+  N +  ++ V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +++S Y     +     +F  M  +++++WNT+I G+L NGFP + L  F ++++  +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
           +    ++     +C+ + SLR G++ H Y LK+ L     +  ++I +YAK G +  S +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VFN + EK T SWNA+I  Y  HG  KEA+  F+ MQ  G   PD  TF  VL+AC+H+G
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSG 712

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WW 661
           L+ +G R  D M + +G  P   H +C++D+LGRAG LD+A RV+ ++ +   +D   W 
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV-AEEMSEEADVGIWK 771

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           +L S+C  H NL +G  +A  L E E +KP  YVLLSN+YA  G WE+   +R+ +    
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831

Query: 722 VIKQPGCSWI 731
           + K  GCSWI
Sbjct: 832 LRKDAGCSWI 841



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 279/575 (48%), Gaps = 30/575 (5%)

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           + ++N DV   T  ++     G  D +  VFD +  ++L  +NA+I+  + N   D  + 
Sbjct: 114 TRLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172

Query: 176 LFREM-HKLDVRRDNYSFASVLSVCDAGLLEFGRQL--HSLVTKSGFSCLVSVVNALITM 232
            F EM    D+  D++++  V+  C AG+ + G  L  H LV K+G    V V NAL++ 
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKAC-AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASLR 288
           Y   G V DA ++F+       + +S+N M+   +  G  EE+ +   +M+      +  
Sbjct: 232 YGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P   T V+V+  C   R   +G  VH  A+K   +    ++NA + MYS CG I  A MI
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLA---SSG 400
           F     K++VSWNTM+  ++             +M + G  ++ DE T  + +       
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           F+  ++ +H +      + N  V+NA +++YAK   +  A ++FH +  + + +WN LI 
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G   +  P   L    ++ +S L PD +T+   LS+C+++ SLR GK++HG++++N L  
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +  ++++LY  CG+L     +F+ M +K  +SWN +I+ Y Q+G    A+  F+ M 
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLG 636
             G I+    +   V  ACS    +  G          ++ D  FI        ++D+  
Sbjct: 590 LYG-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS-----LIDMYA 643

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           + G + ++ +V N    +  + +W A+      HG
Sbjct: 644 KNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG 677


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 196/601 (32%), Positives = 329/601 (54%), Gaps = 69/601 (11%)

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK-------- 250
           C+       + LHS + K+       ++N LI+ Y   G++  ACKVF++          
Sbjct: 20  CETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWN 79

Query: 251 ---------GYVC------------DHISYNVMMDGLASVGRVEEALIRFRDMLV--ASL 287
                    G V             D +S+N ++ G A  G + +++  +  ML    S 
Sbjct: 80  TILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSF 139

Query: 288 RPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS--------- 335
             + +TF +++   S   C ++G Q+H   +K GF +Y  V +  + MYS          
Sbjct: 140 NLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARK 199

Query: 336 ----------------------CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
                                 CG+++++  +F  ++E+D +SW +MI+ + Q  L R A
Sbjct: 200 VFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDA 259

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           I  + EM+   ++ D++TFGS+L + G +  ++    +HA++       NI V++AL+  
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K + IK A  +F  M+ +N+++W  ++ G+  NG+  + ++ FS++    + PD++TL
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              +SSCA ++SL  G Q H   L + LIS +++ NA++TLY KCG ++ S R+FN +  
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           KD ++W AL+S YAQ G+  E +  F++M   G +KPD+ TF  VLSACS AGLV+ G +
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHG-LKPDKVTFIGVLSACSRAGLVEKGNQ 498

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           IF+SM+N++G +P +DH +CM+DL  RAG ++EA   IN       + +W  L S+C  +
Sbjct: 499 IFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           GN+ +G+  A  L+E +    + YVLLS++YAA G WEE A +R+ ++  G+ K+PGCSW
Sbjct: 559 GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSW 618

Query: 731 I 731
           I
Sbjct: 619 I 619



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 268/546 (49%), Gaps = 44/546 (8%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C    N      LH++ ++        + N ++S Y     +    +VF ++ +P++
Sbjct: 16  LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           YSW T LSA +K+G V     +FD MP RD   +N++I+G    G     +  +  M K 
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135

Query: 184 D--VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           D     +  +F+++L +    G ++ GRQ+H  V K GF   V V + L+ MY   G + 
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMIS 195

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVE--------------------------- 273
            A KVF+E      + + YN ++ GL   GRVE                           
Sbjct: 196 CARKVFDELPEK--NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQN 253

Query: 274 ----EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVS 326
               +A+  FR+M + +L+  + TF SV++AC   +  + G QVHA  +++ ++    V+
Sbjct: 254 GLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVA 313

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A + MY  C  I  A  +F ++  K++VSW  M+  Y Q      A+  + +MQ  GI 
Sbjct: 314 SALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIE 373

Query: 387 PDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD+FT GS+++S   +  +E     HA    +G+I+ I VSNAL++ Y K   I+ ++++
Sbjct: 374 PDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ +S ++ +TW  L++G+   G   + +  F  +L   L+PD+ T    LS+C+R   +
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLV 493

Query: 504 RHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
             G QI    + ++ ++        MI L+++ G ++ +    N M    D ISW  L+S
Sbjct: 494 EKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553

Query: 562 AYAQHG 567
           +   +G
Sbjct: 554 SCRFYG 559



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 230/449 (51%), Gaps = 17/449 (3%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + ST L   +       G Q+H + ++ G  +Y  V + ++ +Y     +   ++VF E+
Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              +V  + T +    + G V+ +  +F +M +RD   + +MITG T+NG +   I +FR
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EM   +++ D Y+F SVL+ C   + L+ G+Q+H+ + ++ +   + V +AL+ MY  C 
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCK 324

Query: 238 NVVDACKVFEEAKGYVCDH-ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           N+  A  VF   K   C + +S+  M+ G    G  EEA+  F DM    + P + T  S
Sbjct: 325 NIKSAEAVF---KKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 381

Query: 297 VMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+S+C        G Q HA+A+ SG  ++ +VSNA +T+Y  CG I+++  +F  +  KD
Sbjct: 382 VISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKD 441

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIH 409
            V+W  ++S YAQ       I  +  M + G++PD+ TF  +L++     +VE    +  
Sbjct: 442 EVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 501

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGF 467
           + +  +GI+        +I  +++  RI++A    + M  SP + I+W TL++     G 
Sbjct: 502 SMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSP-DAISWATLLSSCRFYGN 560

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSS 496
              G +  +E LM EL P      V LSS
Sbjct: 561 MDIG-KWAAEFLM-ELDPHNTASYVLLSS 587



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   +++G  +DA+ +F ++   + L+ D Y+  + L AC  +     G Q+HAY +R  
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLEN-LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            K    VA+ ++ +Y   +++ S + VF ++   +V SWT                    
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWT-------------------- 345

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                      AM+ G  +NGY +  +  F +M K  +  D+++  SV+S C +   LE 
Sbjct: 346 -----------AMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE 394

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q H+    SG    ++V NAL+T+Y  CG++ D+ ++F E      D +++  ++ G 
Sbjct: 395 GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEIS--FKDEVTWTALVSGY 452

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAY 322
           A  G+  E +  F  ML   L+P ++TF+ V+SAC    L  +      +   + G    
Sbjct: 453 AQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPI 512

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSAILAYL 378
                  I ++S  G+I+EA     ++    D +SW T++S+   Y   ++G+ A    +
Sbjct: 513 QDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLM 572

Query: 379 EM 380
           E+
Sbjct: 573 EL 574



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 6/147 (4%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  C    +    K +H +++K     +  L N +I+ YAK G +  + +VF+ M   + 
Sbjct: 16  LKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNL 75

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
            SWN ++SAY++ G   E    F AM      + D  ++ +++S  +  GL+    + ++
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMP-----RRDGVSWNSLISGYAGCGLIYQSVKAYN 130

Query: 614 SMV-NDYGFIPAEDHLSCMLDLLGRAG 639
            M+ ND  F       S +L L  + G
Sbjct: 131 LMLKNDGSFNLNRITFSTLLILASKRG 157


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 218/706 (30%), Positives = 364/706 (51%), Gaps = 44/706 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  + ++ +FV++ S  K+  D  + S  L AC+ + +   G Q+H  A++ G +    
Sbjct: 116 NGVNRKSIEIFVRMRSL-KIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVV 174

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
             + ++ +Y                            S C K+   D A  +F +MP+R+
Sbjct: 175 TGSALVDMY----------------------------SKCKKL---DGAFRIFREMPERN 203

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLH 211
           L  ++A+I G  +N     G+ LF++M K+ +     ++ASV   C AGL  F  G QLH
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC-AGLSAFKLGTQLH 262

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               KS F+    +  A + MY  C  + DA KVF           SYN ++ G A   +
Sbjct: 263 GHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN--PPRQSYNAIIVGYARQDQ 320

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
             +AL  F+ +    L   E++    ++AC   +    G Q+H  A+K G      V+N 
Sbjct: 321 GLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT 380

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG + EAC IF  ++ +D VSWN +I+ + Q       +  ++ M    + PD
Sbjct: 381 ILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           +FT+GS++ +    + +     IH  +  +G+  +  V +AL+  Y K   + +A +I  
Sbjct: 441 DFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHD 500

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            +  +  ++WN++I+GF          ++FS++L   + PD +T +  L  CA ++++  
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GKQIH  +LK NL S + + + ++ +Y+KCG++  S  +F    ++D ++W+A+I AYA 
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAY 620

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG G++A+  F+ MQ +  +KP+   F +VL AC+H G VD G   F  M + YG  P  
Sbjct: 621 HGHGEQAIKLFEEMQ-LLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHM 679

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H SCM+DLLGR+  ++EA ++I S H +A    W  L S C   GN+ +       LL+
Sbjct: 680 EHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQ 739

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +    S YVLL+N+YA  G+W E A IR ++K   + K+PGCSWI
Sbjct: 740 LDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWI 785



 Score =  265 bits (677), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 172/627 (27%), Positives = 322/627 (51%), Gaps = 22/627 (3%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           ++ S  L  C+NL+    G Q HA  +        +VAN ++  Y  + ++    +VF  
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           + + DV SW T +    ++G++ +A  +FD MP+RD+  +N++++    NG     I +F
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             M  L +  D  +F+ VL  C +G+ ++  G Q+H L  + GF   V   +AL+ MY  
Sbjct: 127 VRMRSLKIPHDYATFSVVLKAC-SGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 236 CGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           C  +  A ++F E   +  VC    ++ ++ G     R  E L  F+DML   +  S+ T
Sbjct: 186 CKKLDGAFRIFREMPERNLVC----WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQST 241

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + SV  +C      ++G Q+H  A+KS F   + +  A + MY+ C ++ +A  +F  L 
Sbjct: 242 YASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP 301

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS---GFIEMVE 406
                S+N +I  YA+++ G  A+  +  +Q   +  DE +  G+L A S   G +E ++
Sbjct: 302 NPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ 361

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           + H      G+  NI V+N ++  Y K   + +A  IF +M  R+ ++WN +I     N 
Sbjct: 362 L-HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNE 420

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
             V+ L  F  +L S + PD++T    + +CA   +L +G +IHG ++K+ +     +G+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y KCG L  + ++ + + EK T+SWN++IS ++   + + A   F  M ++G I 
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVI- 539

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAE 645
           PD  T+  VL  C++   ++ G +I   ++     + ++ ++ S ++D+  + G + ++ 
Sbjct: 540 PDNFTYATVLDVCANMATIELGKQIHAQILKLN--LHSDVYIASTLVDMYSKCGNMQDS- 596

Query: 646 RVINSQHIQARSDNWWALFSACAAHGN 672
           R++  +  +     W A+  A A HG+
Sbjct: 597 RLMFEKTPKRDYVTWSAMICAYAYHGH 623



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 225/482 (46%), Gaps = 47/482 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +R      AL +F  +  ++ L  D  SLS  L AC+ ++    G QLH  A+
Sbjct: 309 NAIIVGYARQDQGLKALEIFQSLQRTY-LSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     VANTIL +Y     LV    +F +++  D  SW                  
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSW------------------ 409

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-- 202
                        NA+I    +N      + LF  M +  +  D++++ SV+  C AG  
Sbjct: 410 -------------NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC-AGQQ 455

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L +G ++H  + KSG      V +AL+ MY  CG +++A K+ +  +      +S+N +
Sbjct: 456 ALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTT--VSWNSI 513

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G +S  + E A   F  ML   + P   T+ +V+  C       +G Q+HAQ +K   
Sbjct: 514 ISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNL 573

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   +++  + MYS CG + ++ ++F +  ++D V+W+ MI  YA    G  AI  + E
Sbjct: 574 HSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEE 633

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNE 435
           MQ + ++P+   F S+L +   +  V+  +H F  +    G+  +++  + ++    +++
Sbjct: 634 MQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSD 693

Query: 436 RIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           ++ +A ++  +M    + + W TL++   + G      + F+ LL  +L P + +  V L
Sbjct: 694 QVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL--QLDPQDSSAYVLL 751

Query: 495 SS 496
           ++
Sbjct: 752 AN 753



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 39/235 (16%)

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++T S  L  C+ + +L  GKQ H  ++  + +  + + N ++  Y K  +++ + +VF+
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG----------------------- 583
            M  +D ISWN +I  YA+ G    A S F  M +                         
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 584 -------RIKPDQATFTAVLSACSHAGLVDDGTRI-FDSMVNDYGFIPAEDHLSCMLDLL 635
                  +I  D ATF+ VL ACS  G+ D G  +    +    GF       S ++D+ 
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMY 183

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
            +   LD A R+   + +  R+   W+   A    G ++  R I GL L ++  K
Sbjct: 184 SKCKKLDGAFRIF--REMPERNLVCWSAVIA----GYVQNDRFIEGLKLFKDMLK 232


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 247/797 (30%), Positives = 403/797 (50%), Gaps = 98/797 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA--FGNQLH----- 80
           ++  SR+G +++AL +F++      +  + Y+  + L AC  + +    FG Q+H     
Sbjct: 74  VSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132

Query: 81  -AYALRA--------------GLKAYPHVA------------NTILSLYKNARDLVSVKR 113
            +YA+ A              G   Y   A            N+I+S+Y  A D  S  R
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192

Query: 114 VFSEIQ----------------------NPDV-------------------YSWTTFLSA 132
           +FS +Q                       PDV                   +  +  +SA
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNY- 190
             K G + YA +VF++M  R+    N ++ G     + +    LF +M+ + DV  ++Y 
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312

Query: 191 ----SFASVLSVCDAGLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKV 245
               SF       + GL + GR++H  V  +G    +V + N L+ MY  CG++ DA +V
Sbjct: 313 ILLSSFPEYSLAEEVGLKK-GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F        D +S+N M+ GL   G   EA+ R++ M    + P   T +S +S+C    
Sbjct: 372 FYFMTDK--DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429

Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             ++G Q+H +++K G +   SVSNA +T+Y+  G ++E   IF+ + E D VSWN++I 
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 489

Query: 363 TYA--QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGI 417
             A  +R+L   A++ +L  Q  G + +  TF S+L++     F E+ + IH     N I
Sbjct: 490 ALARSERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFS 476
                  NALI+ Y K   +    +IF  M+ R + +TWN++I+G++ N    + L    
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +L +  R D +  +  LS+ A +++L  G ++H   ++  L S + +G+A++ +Y+KCG
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            LD +LR FN M  +++ SWN++IS YA+HG+G+EA+  F+ M+  G+  PD  TF  VL
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SACSHAGL+++G + F+SM + YG  P  +H SCM D+LGRAG LD+ E  I    ++  
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788

Query: 657 SDNWWALFSACA-AHG-NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
              W  +  AC  A+G    LG+  A +L + E +    YVLL N+YAA G WE+    R
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848

Query: 715 ELLKRTGVIKQPGCSWI 731
           + +K   V K+ G SW+
Sbjct: 849 KKMKDADVKKEAGYSWV 865



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/479 (30%), Positives = 247/479 (51%), Gaps = 25/479 (5%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R  HS + K+     V + N LI  Y   G+ V A KVF+E     C  +S+  ++ G +
Sbjct: 21  RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC--VSWACIVSGYS 78

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAY 322
             G  +EAL+  RDM+   +  ++  FVSV+ AC     +    G Q+H    K  +   
Sbjct: 79  RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138

Query: 323 TSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             VSN  I+MY  C G +  A   F  ++ K+ VSWN++IS Y+Q    RSA   +  MQ
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198

Query: 382 SVGIRPDEFTFGSLLASS-----GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
             G RP E+TFGSL+ ++       + ++E I   +  +G++T++ V + L+SA+AK+  
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL---SV 492
           +  A ++F+ M  RN +T N L+ G +   +  +  + F ++  M ++ P+ Y +   S 
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
              S A    L+ G+++HG+V+   L+  M  +GN ++ +YAKCG +  + RVF  M +K
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D++SWN++I+   Q+G   EAV  +K+M+    I P   T  + LS+C+       G +I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLGQQI 437

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQARSDNWWALFSACA 668
               +   G        + ++ L    GYL+E  ++ +S  +H Q    +W ++  A A
Sbjct: 438 HGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV---SWNSIIGALA 492



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 160/577 (27%), Positives = 289/577 (50%), Gaps = 32/577 (5%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R++    + DVY     ++A  + G    A +VFD+MP R+   +  +++G + NG    
Sbjct: 26  RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCD----AGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
            +   R+M K  +  + Y+F SVL  C      G+L FGRQ+H L+ K  ++    V N 
Sbjct: 86  ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSYAVDAVVSNV 144

Query: 229 LITMYFNC-GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           LI+MY+ C G+V  A   F + +  V + +S+N ++   +  G    A   F  M     
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIE--VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202

Query: 288 RPSELTFVS-VMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           RP+E TF S V +AC       R+  Q+     KSG      V +  ++ ++  G +  A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGF 401
             +F +++ ++ V+ N ++    ++  G  A   +++M S + + P+ +    LL+S   
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPE 320

Query: 402 IEMVE--------MIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
             + E         +H  V   G++   + + N L++ YAK   I  A ++F+ M+ ++ 
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++WN++I G   NG  ++ ++ +  +   ++ P  +TL  +LSSCA +   + G+QIHG 
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG-KE 571
            LK  +   +S+ NA++TLYA+ G L+   ++F+ M E D +SWN++I A A+      E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
           AV CF   Q  G+ K ++ TF++VLSA S     + G +I    + +     A    + +
Sbjct: 501 AVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE-NAL 558

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSA 666
           +   G+ G +D  E++ +   +  R DN  W ++ S 
Sbjct: 559 IACYGKCGEMDGCEKIFS--RMAERRDNVTWNSMISG 593



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 209/477 (43%), Gaps = 52/477 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L ++G + +A+  +  +   H + P  ++L ++L++CA+L+ A  G Q+H  +L
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G+     V+N +++LY     L   +++FS +   D  SW + + A  +         
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR--------- 493

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                 +R LP                  +  F    +   + +  +F+SVLS   +   
Sbjct: 494 -----SERSLPE----------------AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E G+Q+H L  K+  +   +  NALI  Y  CG  +D C+          D++++N M+
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGE-MDGCEKIFSRMAERRDNVTWNSMI 591

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFE 320
            G      + +AL     ML    R     + +V+SA         G +VHA ++++  E
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V +A + MYS CG++D A   F  +  ++  SWN+MIS YA+   G  A+  +  M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711

Query: 381 QSVG-IRPDEFTFGSLLAS--------SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           +  G   PD  TF  +L++         GF     M  ++    G+   I+  + +    
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY----GLAPRIEHFSCMADVL 767

Query: 432 AKNERIKQAYQIFHNMSPR-NIITWNTLINGFL-LNGFPVQGLQHFSELLMSELRPD 486
            +   + +       M  + N++ W T++      NG   +  +  +E+L  +L P+
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF-QLEPE 823


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 226/709 (31%), Positives = 368/709 (51%), Gaps = 47/709 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLK---PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           SG   +A+ ++  + +S  +    PD  +L++ L AC    +   G+++H  A+++GL  
Sbjct: 137 SGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDR 196

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFLSACTKMGHVDYACEVFDKM 149
              VAN ++ +Y     L S  RVF  +++  DV SW + +S                  
Sbjct: 197 STLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAIS------------------ 238

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                        GC +NG     + LFR M       ++Y+   VL VC +   L  GR
Sbjct: 239 -------------GCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGR 285

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           +LH+ + K G    +   NAL+ MY  CG V  A +VF E      D+IS+N M+     
Sbjct: 286 ELHAALLKCGTEFNIQ-CNALLVMYARCGWVDSALRVFREIGDK--DYISWNSMLSCYVQ 342

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSV 325
                EA+  F +M+     P     VS++SA     R+  G +VHA A+K   ++   +
Sbjct: 343 NRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQI 402

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +N  + MY  C  ++ +  +F R++ KD VSW T+I+ YAQ +    AI  +   Q  GI
Sbjct: 403 ANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGI 462

Query: 386 RPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           + D    GS+L A SG   I +++ +H++   NG++ ++ + N +I  Y +   +  A  
Sbjct: 463 KVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYALN 521

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  +  ++I+TW +++N F  NG   + +  F ++L + ++PD   L   L + A +SS
Sbjct: 522 IFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSS 581

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK+IHG++++     + ++ ++++ +Y+ CG ++ +L+VF+    KD + W A+I+A
Sbjct: 582 LTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINA 641

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
              HG GK+A+  FK M + G + PD  +F A+L ACSH+ LVD+G    D MV+ Y   
Sbjct: 642 TGMHGHGKQAIYIFKRMLETG-VSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQ 700

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P ++H +C++DLLGR+G  +EA + I S  ++ +S  W AL  AC  H N  L  I    
Sbjct: 701 PWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDK 760

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E D P  YVL+SN++A  G W     IR  +   G+ K P CSWI
Sbjct: 761 LLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWI 809



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 181/673 (26%), Positives = 303/673 (45%), Gaps = 51/673 (7%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           SL  L + G  ++AL       +  +  P        L   A  R  + G QLHA+A+  
Sbjct: 25  SLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVAT 84

Query: 87  GLKA---YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           G         +A  +L +Y     L    R+F  +    V+SW   + AC   G    A 
Sbjct: 85  GALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAV 144

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
            V+  M   + PV  A   GCT                           ASVL  C A G
Sbjct: 145 GVYRAMRASE-PVAGAAPDGCT--------------------------LASVLKACGAEG 177

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
               G ++H L  KSG      V NAL+ MY  CG +  A +VFE  +    D  S+N  
Sbjct: 178 DGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGR-DVASWNSA 236

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G    G   EAL  FR M       +  T V V+  C        G ++HA  +K G 
Sbjct: 237 ISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGT 296

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E +    NA + MY+ CG +D A  +F  + +KD +SWN+M+S Y Q  L   AI  + E
Sbjct: 297 E-FNIQCNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGE 355

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M   G  PD     SLL++ G +  +     +HA+     + +++Q++N L+  Y K   
Sbjct: 356 MVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYS 415

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ + ++F  M  ++ ++W T+I  +  +    + +  F       ++ D   +   L +
Sbjct: 416 VECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEA 475

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C+ + S+   KQ+H Y ++N L+  + L N +I +Y +CG++  +L +F M+ +KD ++W
Sbjct: 476 CSGLKSISLLKQVHSYAIRNGLLD-LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTW 534

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            ++++ +A++G   EAV+ F  M + G I+PD      +L A +    +  G  I   ++
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAG-IQPDSVALVGILGAIAGLSSLTKGKEIHGFLI 593

Query: 617 NDYGFIPAEDH-LSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGN 672
              G  P E   +S ++D+    G ++ A +V +    +A+  +   W A+ +A   HG+
Sbjct: 594 R--GKFPVEGAVVSSLVDMYSGCGSMNYALKVFD----EAKCKDVVLWTAMINATGMHGH 647

Query: 673 LRLGRIIAGLLLE 685
            +    I   +LE
Sbjct: 648 GKQAIYIFKRMLE 660



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 226/517 (43%), Gaps = 60/517 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y +A+  F ++   +   PD   + + L+A  +L     G ++HAYA++  L +   +AN
Sbjct: 346 YAEAIDFFGEM-VQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIAN 404

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           T++ +Y     +    RVF  ++  D  SWTT ++   +      A              
Sbjct: 405 TLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEA-------------- 450

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLV 214
                            IG FR   K  ++ D     S+L  C +GL  +   +Q+HS  
Sbjct: 451 -----------------IGKFRTAQKEGIKVDPMMMGSILEAC-SGLKSISLLKQVHSYA 492

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            ++G   L+ + N +I +Y  CG V  A  +FE       D +++  M++  A  G + E
Sbjct: 493 IRNGLLDLI-LKNRIIDIYGECGEVCYALNIFEMLDKK--DIVTWTSMVNCFAENGLLHE 549

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  F  ML A ++P  +  V ++ A         G ++H   ++  F    +V ++ + 
Sbjct: 550 AVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVD 609

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS CG ++ A  +F   + KD+V W  MI+       G+ AI  +  M   G+ PD  +
Sbjct: 610 MYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVS 669

Query: 392 FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN------ALISAYAKNERIKQAYQIFH 445
           F +LL +    ++V+      +++ +++  ++         ++    ++ + ++AY+   
Sbjct: 670 FLALLYACSHSKLVD--EGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIK 727

Query: 446 NM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC-ARISS 502
           +M   P++++ W  L+    ++      +    +LL  EL PD     V +S+  A +  
Sbjct: 728 SMPLEPKSVV-WCALLGACRIHKNHELAMIATDKLL--ELEPDNPGNYVLVSNVFAEMGK 784

Query: 503 LRHGKQIHGYVLKNNL-----ISKMSLGNAMITLYAK 534
             + K+I   + +  L      S + +GN + T  A+
Sbjct: 785 WNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTAR 821



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 13/185 (7%)

Query: 19  ELLLKLNI----SLAN-LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           E+L K +I    S+ N  + +G   +A+ LF ++ ++  ++PD  +L   L A A L + 
Sbjct: 524 EMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNA-GIQPDSVALVGILGAIAGLSSL 582

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G ++H + +R        V ++++ +Y     +    +VF E +  DV  WT  ++A 
Sbjct: 583 TKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINAT 642

Query: 134 TKMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIG---IGLFREMHKLDVR 186
              GH   A  +F +M +     D   + A++  C+ +   D G   + +    +KL   
Sbjct: 643 GMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPW 702

Query: 187 RDNYS 191
           +++Y+
Sbjct: 703 QEHYA 707


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 217/706 (30%), Positives = 367/706 (51%), Gaps = 44/706 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  + ++ +FV++ S  K+  D  + +  L AC+ + +   G Q+H  A++ G +    
Sbjct: 116 NGVNRKSIEIFVRMRSL-KIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVV 174

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
             + ++ +Y                            S C K+   D A  VF +MP+R+
Sbjct: 175 TGSALVDMY----------------------------SKCKKL---DDAFRVFREMPERN 203

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLH 211
           L  ++A+I G  +N     G+ LF++M K+ +     ++ASV   C AGL  F  G QLH
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSC-AGLSAFKLGTQLH 262

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               KS F+    +  A + MY  C  + DA KVF           SYN ++ G A   +
Sbjct: 263 GHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPN--PPRQSYNAIIVGYARQDQ 320

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
             +AL  F+ +   +L   E++    ++AC   +    G Q+H  A+K G      V+N 
Sbjct: 321 GLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANT 380

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG + EAC+IF  ++ +D VSWN +I+ + Q       +  ++ M    + PD
Sbjct: 381 ILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPD 440

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           +FT+GS++ +    + +     IH  +  +G+  +  V +AL+  Y K   + +A +I  
Sbjct: 441 DFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHA 500

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            +  +  ++WN++I+GF          ++FS++L   + PD YT +  L  CA ++++  
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIEL 560

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GKQIH  +LK  L S + + + ++ +Y+KCG++  S  +F    ++D ++W+A+I AYA 
Sbjct: 561 GKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAY 620

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG G++A++ F+ MQ +  +KP+   F +VL AC+H G VD G   F  M++ YG  P  
Sbjct: 621 HGLGEKAINLFEEMQ-LLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQM 679

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H SCM+DLLGR+G ++EA ++I S   +A    W  L S C   GN+ +       LL+
Sbjct: 680 EHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQ 739

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +    S YVLL+N+YA  G+W E A +R ++K   + K+PGCSWI
Sbjct: 740 LDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWI 785



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 186/661 (28%), Positives = 326/661 (49%), Gaps = 29/661 (4%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + S  L  C+NL+    G Q+H   +  G     +VAN +L  Y  +  +    +VF  +
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              DV SW T +     +G++ +A  +FD MP+RD+  +N++++    NG     I +F 
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 179 EMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            M  L +  D  +FA +L  C    D GL   G Q+H L  + GF   V   +AL+ MY 
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGL---GLQVHCLAIQMGFENDVVTGSALVDMYS 184

Query: 235 NCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            C  + DA +VF E   +  VC    ++ ++ G     R  E L  F+DML   +  S+ 
Sbjct: 185 KCKKLDDAFRVFREMPERNLVC----WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240

Query: 293 TFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T+ SV  +C      ++G Q+H  A+KS F   + +  A + MY+ C ++ +A  +F  L
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVEMI 408
                 S+N +I  YA+++ G  A+  +  +Q   +  DE +  G+L A S     +E I
Sbjct: 301 PNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI 360

Query: 409 --HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
             H      G+  NI V+N ++  Y K   + +A  IF  M  R+ ++WN +I     N 
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNE 420

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
             V+ L  F  +L S + PD++T    + +CA   +L +G +IHG ++K+ +     +G+
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y KCG L  + ++   + EK T+SWN++IS ++   + + A   F  M ++G I 
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMG-II 539

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAE 645
           PD  T+  VL  C++   ++ G +I   ++     + ++ ++ S ++D+  + G + ++ 
Sbjct: 540 PDNYTYATVLDVCANMATIELGKQIHAQILKLQ--LHSDVYIASTLVDMYSKCGNMQDS- 596

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE--QDKPSVYVLLSNIYAA 703
           R++  +  +     W A+  A A HG   LG     L  E +    KP+  + +S + A 
Sbjct: 597 RLMFEKAPKRDYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNVKPNHTIFISVLRAC 653

Query: 704 A 704
           A
Sbjct: 654 A 654



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 223/482 (46%), Gaps = 47/482 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +R      AL +F  +  ++ L  D  SLS  L AC+ ++    G QLH  A+
Sbjct: 309 NAIIVGYARQDQGLKALDIFQSLQRNN-LGFDEISLSGALTACSVIKRHLEGIQLHGLAV 367

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     VANTIL +Y     L+    +F E++  D  SW                  
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSW------------------ 409

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-- 202
                        NA+I    +N      + LF  M +  +  D++++ SV+  C AG  
Sbjct: 410 -------------NAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKAC-AGQQ 455

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L +G ++H  + KSG      V +AL+ MY  CG +++A K+    +      +S+N +
Sbjct: 456 ALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTT--VSWNSI 513

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G +S  + E A   F  ML   + P   T+ +V+  C       +G Q+HAQ +K   
Sbjct: 514 ISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQL 573

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   +++  + MYS CG + ++ ++F +  ++D V+W+ MI  YA   LG  AI  + E
Sbjct: 574 HSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEE 633

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFI---NGIITNIQVSNALISAYAKNE 435
           MQ + ++P+   F S+L +   +  V+  +H F  +    G+   ++  + ++    ++ 
Sbjct: 634 MQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSG 693

Query: 436 RIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           ++ +A ++  +M    + + W TL++   + G      + F+ LL  +L P + +  V L
Sbjct: 694 QVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLL--QLDPQDSSAYVLL 751

Query: 495 SS 496
           ++
Sbjct: 752 AN 753


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 216/624 (34%), Positives = 343/624 (54%), Gaps = 19/624 (3%)

Query: 122 DVYSW------TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           D ++W         LS   + G   +A  VF KMP+RD+  +N M+ G  + G  +  + 
Sbjct: 122 DRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALD 181

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMY 233
           L+  M    VR D Y+F  VL  C  G+ ++  GR++H+ V + GF+  V V+NAL+TMY
Sbjct: 182 LYHRMMWAGVRPDVYTFPCVLRSC-GGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMY 240

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             CG+VV A KVF+     V D IS+N M+ G    G     L  F  ML   ++P+ +T
Sbjct: 241 AKCGDVVAARKVFDSMA--VMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMT 298

Query: 294 FVSVMSAC-LCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             SV  A  L   + +  ++H  A+K GF    +  N+ I MY+S G + +A  +F+R+ 
Sbjct: 299 ITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMD 358

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
            +D +SW  MIS Y +      A+  Y  M+   + PD+ T  S LA+    G +++   
Sbjct: 359 TRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK 418

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H      G ++ + V+NAL+  YAK++RI +A ++F  M  +++++W+++I GF  N  
Sbjct: 419 LHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHR 478

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L +F  +L ++++P+  T   AL++CA   +LR GK+IH +VL+  +  +  L NA
Sbjct: 479 NFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNA 537

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I LY KCG    +   F     KD +SWN +I+ +  HG G+ A+S F  M  +G   P
Sbjct: 538 LIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGEC-P 596

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+ TF A+L ACS  G+V +G  +F SM + Y  +P   H +CM+DLL R G L EA   
Sbjct: 597 DEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNF 656

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           IN   I   +  W AL + C  H ++ LG + A  +LE E +    +VLL ++YA AG+W
Sbjct: 657 INEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIW 716

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++ A +R+ ++  G+    GCSW+
Sbjct: 717 DKLARVRKTMREKGLDHDSGCSWV 740



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 164/611 (26%), Positives = 286/611 (46%), Gaps = 60/611 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    ++G  ++AL L+ ++  +  ++PD+Y+    L +C  + +   G ++H
Sbjct: 160 VFSWNVMVGGYGKAGLLEEALDLYHRMMWA-GVRPDVYTFPCVLRSCGGVPDWRMGREVH 218

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR G      V N ++++Y    D+V+ ++VF  +   D  SW              
Sbjct: 219 AHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISW-------------- 264

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  ENG  + G+ LF  M + +V+ +  +  SV     
Sbjct: 265 -----------------NAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA-- 305

Query: 201 AGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           +GLL    F +++H L  K GF+  V+  N+LI MY + G +  A  VF        D +
Sbjct: 306 SGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTR--DAM 363

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           S+  M+ G    G  ++AL  +  M V ++ P ++T  S ++AC C     VG ++H  A
Sbjct: 364 SWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 423

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--QRNLGRS 372
              GF +Y  V+NA + MY+   +ID+A  +F  + EKD+VSW++MI+ +    RN    
Sbjct: 424 ESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNF--- 480

Query: 373 AILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
             L Y       ++P+  TF    +  A++G +   + IHA V   GI     + NALI 
Sbjct: 481 EALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALID 540

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K  +   A+  F     +++++WN +I GF+ +G     L  F++++     PDE T
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVT 600

Query: 490 LSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-M 547
               L +C+R   +  G ++ H    K +++  +     M+ L ++ G L  +    N M
Sbjct: 601 FVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEM 660

Query: 548 MIEKDTISWNALISA--YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGL 604
            I  D   W AL++     +H E  E      A + V  ++P+ A +  +L    + AG+
Sbjct: 661 PITPDAAVWGALLNGCRIHRHVELGEL-----AAKYVLELEPNDAGYHVLLCDLYADAGI 715

Query: 605 VDDGTRIFDSM 615
            D   R+  +M
Sbjct: 716 WDKLARVRKTM 726


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 221/730 (30%), Positives = 374/730 (51%), Gaps = 58/730 (7%)

Query: 21   LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
            L + N  +++ SR+  Y + L  F+++ S+  L PD ++    + ACA + +   G  +H
Sbjct: 506  LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 565

Query: 81   AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
               ++ GL     V N ++S Y                                  G V 
Sbjct: 566  GLVVKTGLVEDVFVGNALVSFYGTH-------------------------------GFVT 594

Query: 141  YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD----VRRDNYSFASVL 196
             A ++FD MP+R+L  +N+MI   ++NG+ +    L  EM + +       D  +  +VL
Sbjct: 595  DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 654

Query: 197  SVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             VC    + GL   G+ +H    K      + + NAL+ MY  CG + +A  +F+     
Sbjct: 655  PVCAREREIGL---GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 711

Query: 253  VCDHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSAC----LCPRV 306
              + +S+N M+ G ++ G         R ML     ++  E+T ++ +  C      P +
Sbjct: 712  --NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 769

Query: 307  GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
              ++H  ++K  F     V+NA +  Y+ CG +  A  +F  ++ K + SWN +I  +AQ
Sbjct: 770  -KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 828

Query: 367  RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
             N  R ++ A+L+M+  G+ PD FT  SLL++   ++ + +   +H F+  N +  ++ V
Sbjct: 829  SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 888

Query: 424  SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
              +++S Y     +     +F  M  +++++WNT+I G+L NGFP + L  F ++++  +
Sbjct: 889  YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 948

Query: 484  RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            +    ++     +C+ + SLR G++ H Y LK+ L     +  ++I +YAK G +  S +
Sbjct: 949  QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 1008

Query: 544  VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            VFN + EK T SWNA+I  Y  HG  KEA+  F+ MQ  G   PD  TF  VL+AC+H+G
Sbjct: 1009 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSG 1067

Query: 604  LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WW 661
            L+ +G R  D M + +G  P   H +C++D+LGRAG LD+A RV+ ++ +   +D   W 
Sbjct: 1068 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV-AEEMSEEADVGIWK 1126

Query: 662  ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            +L S+C  H NL +G  +A  L E E +KP  YVLLSN+YA  G WE+   +R+ +    
Sbjct: 1127 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 1186

Query: 722  VIKQPGCSWI 731
            + K  GCSWI
Sbjct: 1187 LRKDAGCSWI 1196



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 279/575 (48%), Gaps = 30/575 (5%)

Query: 116  SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            + ++N DV   T  ++     G  D +  VFD +  ++L  +NA+I+  + N   D  + 
Sbjct: 469  TRLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 527

Query: 176  LFREM-HKLDVRRDNYSFASVLSVCDAGLLEFGRQL--HSLVTKSGFSCLVSVVNALITM 232
             F EM    D+  D++++  V+  C AG+ + G  L  H LV K+G    V V NAL++ 
Sbjct: 528  TFIEMISTTDLLPDHFTYPCVIKAC-AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 586

Query: 233  YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASLR 288
            Y   G V DA ++F+       + +S+N M+   +  G  EE+ +   +M+      +  
Sbjct: 587  YGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 644

Query: 289  PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            P   T V+V+  C   R   +G  VH  A+K   +    ++NA + MYS CG I  A MI
Sbjct: 645  PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 704

Query: 346  FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLA---SSG 400
            F     K++VSWNTM+  ++             +M + G  ++ DE T  + +       
Sbjct: 705  FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 764

Query: 401  FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            F+  ++ +H +      + N  V+NA +++YAK   +  A ++FH +  + + +WN LI 
Sbjct: 765  FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 824

Query: 461  GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
            G   +  P   L    ++ +S L PD +T+   LS+C+++ SLR GK++HG++++N L  
Sbjct: 825  GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 884

Query: 521  KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
             + +  ++++LY  CG+L     +F+ M +K  +SWN +I+ Y Q+G    A+  F+ M 
Sbjct: 885  DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 944

Query: 581  DVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLG 636
              G I+    +   V  ACS    +  G          ++ D  FI        ++D+  
Sbjct: 945  LYG-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS-----LIDMYA 998

Query: 637  RAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            + G + ++ +V N    +  + +W A+      HG
Sbjct: 999  KNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG 1032


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 214/627 (34%), Positives = 330/627 (52%), Gaps = 25/627 (3%)

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           K  F  +  P+  + T  L    + G +  A ++F+KM   D  ++N +I G T NG   
Sbjct: 47  KTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQ 106

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALI 230
             I  +  M    +R DN++F  V+  C   L L  G+++H  + K GF   V V N LI
Sbjct: 107 EAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLI 166

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY   G +  A KVF+E    V D +S+N M+ G    G    +L+ F++ML    +  
Sbjct: 167 DMYLKIGFIELAEKVFDEMP--VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKAD 224

Query: 291 ELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
               +S + AC    C R G ++H Q ++S  E    V  + I MY  CGK+D A  +F 
Sbjct: 225 RFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFN 284

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM 404
           R+  K+IV+WN MI    + +                + PD  T  +LL S   SG +  
Sbjct: 285 RIYSKNIVAWNAMIGGMQEDD---------------KVIPDVITMINLLPSCSQSGALLE 329

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + IH F      +  + +  AL+  Y K   +K A  +F+ M+ +N+++WNT++  ++ 
Sbjct: 330 GKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQ 389

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           N    + L+ F  +L   L+PD  T++  L + A ++S   GKQIH Y++K  L S   +
Sbjct: 390 NEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFI 449

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            NA++ +YAKCGDL  +   F+ M+ KD +SWN +I AYA HG G+ ++  F  M+  G 
Sbjct: 450 SNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKG- 508

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
            KP+ +TF ++L+ACS +GL+D+G   F+SM  +YG  P  +H  CMLDLLGR G LDEA
Sbjct: 509 FKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEA 568

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           +  I    +   +  W +L +A   H ++ L  + A  +L  + D    YVLLSN+YA A
Sbjct: 569 KCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEA 628

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G WE+   I+ L+K  G++K  GCS +
Sbjct: 629 GRWEDVDRIKYLMKEQGLVKTVGCSMV 655



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 147/650 (22%), Positives = 285/650 (43%), Gaps = 83/650 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   + +G +Q+A+  + ++     ++ D ++    + AC  L     G ++H   +
Sbjct: 93  NVIIRGYTNNGLFQEAIDFYYRMEC-EGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +V N ++ +Y     +   ++VF E+   D+ SW                  
Sbjct: 152 KIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSW------------------ 193

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                        N+M++G   +G     +  F+EM +L  + D +   S L  C     
Sbjct: 194 -------------NSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHC 240

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G ++H  V +S     + V  +LI MY  CG V  A +VF     Y  + +++N M+
Sbjct: 241 LRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRI--YSKNIVAWNAMI 298

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G+    +V                P  +T ++++ +C        G  +H  A++  F 
Sbjct: 299 GGMQEDDKV---------------IPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFL 343

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            Y  +  A + MY  CG++  A  +F ++ EK++VSWNTM++ Y Q    + A+  +  +
Sbjct: 344 PYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHI 403

Query: 381 QSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
            +  ++PD  T  S+L +   +      + IH+++   G+ +N  +SNA++  YAK   +
Sbjct: 404 LNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDL 463

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A + F  M  +++++WNT+I  + ++GF    +Q FSE+     +P+  T    L++C
Sbjct: 464 QTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTAC 523

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLG------NAMITLYAKCGDLD-CSLRVFNMMIE 550
           + IS L       G+   N++  +  +         M+ L  + G+LD     +  M + 
Sbjct: 524 S-ISGLID----EGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLV 578

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGT 609
                W +L++A   H    + V    A + +  +K D      +LS   + AG  +D  
Sbjct: 579 PTARIWGSLLAASRNH---NDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVD 635

Query: 610 RIFDSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVINSQHIQARSD 658
           RI   ++ + G +     + C M+D+ GR      +E  IN     A ++
Sbjct: 636 RI-KYLMKEQGLVKT---VGCSMVDINGR------SESFINQDRSHAHTN 675



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A   ++  Y++AL +F  I  +  LKPD  ++++ L A A L + + G Q+H
Sbjct: 377 MVSWNTMVAAYVQNEQYKEALKMFQHI-LNEPLKPDAITIASVLPAVAELASRSEGKQIH 435

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +Y ++ GL +   ++N I+ +Y    DL + +  F  +   DV SW T + A    G   
Sbjct: 436 SYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGR 495

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
            + + F +M  +        + +++T C+ +G  D G G F  M
Sbjct: 496 TSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSM 539


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 235/724 (32%), Positives = 380/724 (52%), Gaps = 60/724 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G    A+  F  +  S  +K    +L + L+A   + N   G  +HA A+
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +  +V ++++S+Y                            S C KM   + A +
Sbjct: 355 KLGLASNIYVGSSLVSMY----------------------------SKCEKM---EAAAK 383

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           VF+ + +++   +NAMI G   NG     + LF +M       D+++F S+LS C A   
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD--HISYNV 261
           LE G Q HS++ K   +  + V NAL+ MY  CG + DA ++FE     +CD  ++++N 
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER----MCDRDNVTWNT 499

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           ++          EA   F+ M +  +        S + AC        G QVH  ++K G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +      ++ I MYS CG I +A  +F+ L E  +VS N +I+ Y+Q NL   A++ + 
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQ 618

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN-------ALISAY 431
           EM + G+ P E TF +++ +    E + +   F   +G IT    S+       +L+  Y
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQF---HGQITKRGFSSEGEYLGISLLGMY 675

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
             +  + +A  +F  +S P++I+ W  +++G   NGF  + L+ + E+    + PD+ T 
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735

Query: 491 SVALSSCARISSLRHGKQIHGYV--LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
              L  C+ +SSLR G+ IH  +  L ++L    S  N +I +YAKCGD+  S +VF+ M
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEM 793

Query: 549 IEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
             + + +SWN+LI+ YA++G  ++A+  F +M+    I PD+ TF  VL+ACSHAG V D
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGKVSD 852

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G +IF+ M+  YG     DH++CM+DLLGR GYL EA+  I +Q+++  +  W +L  AC
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HG+   G I A  L+E E    S YVLLSNIYA+ G WE+A  +R++++  GV K PG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972

Query: 728 CSWI 731
            SWI
Sbjct: 973 YSWI 976



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 171/618 (27%), Positives = 281/618 (45%), Gaps = 79/618 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+  S  G     L  FV +   +++ P+ ++ S  L+ CA   N  FG Q+H   +
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+   +    ++ +Y     +   +RVF  I +P+   WT   S   K G  + A  
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF++M  RD                         E H    R D+ +F +V         
Sbjct: 248 VFERM--RD-------------------------EGH----RPDHLAFVTV--------- 267

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
                                    I  Y   G + DA  +F E      D +++NVM+ 
Sbjct: 268 -------------------------INTYIRLGKLKDARLLFGEMSS--PDVVAWNVMIS 300

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEA 321
           G    G    A+  F +M  +S++ +  T  SV+SA        +G  VHA+A+K G  +
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V ++ ++MYS C K++ A  +F  L+EK+ V WN MI  YA        +  +++M+
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           S G   D+FTF SLL   A+S  +EM    H+ +    +  N+ V NAL+  YAK   ++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A QIF  M  R+ +TWNT+I  ++ +    +    F  + +  +  D   L+  L +C 
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +  L  GKQ+H   +K  L   +  G+++I +Y+KCG +  + +VF+ + E   +S NA
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LI+ Y+Q+   +EAV  F+ M   G + P + TF  ++ AC     +  GT+ F   +  
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQ-FHGQITK 657

Query: 619 YGFIPAEDHLSCMLDLLG 636
            GF    ++L   + LLG
Sbjct: 658 RGFSSEGEYLG--ISLLG 673



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 251/522 (48%), Gaps = 45/522 (8%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K   V YA + FD + ++D+  +N+M++  +  G     +  F  + +  +  + ++F+ 
Sbjct: 107 KCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165

Query: 195 VLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C     +EFGRQ+H  + K G         AL+ MY  C  + DA +VFE    ++
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE----WI 221

Query: 254 CDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
            D   + +  +  G    G  EEA++ F  M     RP  L FV+V              
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                             I  Y   GK+ +A ++F  +   D+V+WN MIS + +R    
Sbjct: 268 ------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            AI  +  M+   ++    T GS+L++ G +  +++   +HA     G+ +NI V ++L+
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           S Y+K E+++ A ++F  +  +N + WN +I G+  NG   + ++ F ++  S    D++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T +  LS+CA    L  G Q H  ++K  L   + +GNA++ +YAKCG L+ + ++F  M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            ++D ++WN +I +Y Q     EA   FK M   G I  D A   + L AC+H   +  G
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVSDGACLASTLKACTHVHGLYQG 548

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            ++    V   G        S ++D+  + G + +A +V +S
Sbjct: 549 KQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 209/449 (46%), Gaps = 40/449 (8%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+ +HS     G      + NA++ +Y  C  V  A K F+  +    D  ++N M+
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK---DVTAWNSML 132

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
              +S+G+  + L  F  +    + P++ TF  V+S C        G Q+H   +K G E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             +    A + MY+ C +I +A  +F  + + + V W  + S Y +  L   A+L +  M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           +  G RPD   F +                                +I+ Y +  ++K A
Sbjct: 253 RDEGHRPDHLAFVT--------------------------------VINTYIRLGKLKDA 280

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  MS  +++ WN +I+G    G     +++F  +  S ++    TL   LS+   +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++L  G  +H   +K  L S + +G++++++Y+KC  ++ + +VF  + EK+ + WNA+I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YA +GE  + +  F  M+  G    D  TFT++LS C+ +  ++ G++ F S++    
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKK 458

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
                   + ++D+  + G L++A ++  
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFE 487



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/455 (20%), Positives = 187/455 (41%), Gaps = 82/455 (18%)

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
           L  R+G  VH++++  G ++   + NA + +Y+ C ++  A   F  L EKD+ +WN+M+
Sbjct: 74  LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGII 418
           S Y+        + +++ +    I P++FTF  +L++      +E    IH  +   G+ 
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            N     AL+  YAK +RI  A ++F  +   N + W  L +G++  G P + +  F  +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
                RPD       +++  R+  L+  + +                             
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLL----------------------------- 283

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
                 F  M   D ++WN +IS + + G    A+  F  M+    +K  ++T  +VLSA
Sbjct: 284 ------FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLSA 336

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
                 +D G  +    +   G        S ++ +  +   ++ A +V  +  ++ ++D
Sbjct: 337 IGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA--LEEKND 393

Query: 659 NWW------------------------------------ALFSACAAHGNLRLGRIIAGL 682
            +W                                    +L S CAA  +L +G     +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453

Query: 683 LLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRE 715
           +++++  K +++V   L ++YA  G  E+A  I E
Sbjct: 454 IIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFE 487


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 228/689 (33%), Positives = 361/689 (52%), Gaps = 46/689 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +KPD  +    L  C++      G ++H  A + G      V NT+L+ Y N        
Sbjct: 133 VKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGN-------- 184

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                               C   G    A +VFD+MP+RD   +N +I  C+ +G+ + 
Sbjct: 185 --------------------CGLFGD---AMKVFDEMPERDKVSWNTVIGLCSLHGFYEE 221

Query: 173 GIGLFREM--HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVVNA 228
            +G FR M   K  ++ D  +  SVL VC +       R +H    K G     V V NA
Sbjct: 222 ALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNA 281

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ +Y  CG+   + KVF+E      + IS+N ++   +  G+  +AL  FR M+   +R
Sbjct: 282 LVDVYGKCGSEKASKKVFDEIDER--NVISWNAIITSFSFRGKYMDALDVFRLMIDEGMR 339

Query: 289 PSELTFVS---VMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+ +T  S   V+      ++G +VH  ++K   E+   +SN+ I MY+  G    A  I
Sbjct: 340 PNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTI 399

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F ++  ++IVSWN MI+ +A+  L   A+    +MQ+ G  P+  TF ++L   A  GF+
Sbjct: 400 FNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFL 459

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            + + IHA +   G   ++ VSNAL   Y+K   +  A  +F N+S R+ +++N LI G+
Sbjct: 460 NVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGY 518

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
                 ++ L+ FSE+ +  +RPD  +    +S+CA ++ +R GK+IHG +++    + +
Sbjct: 519 SRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHL 578

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + N+++ LY +CG +D + +VF  +  KD  SWN +I  Y   GE   A++ F+AM++ 
Sbjct: 579 FVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKED 638

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G ++ D  +F AVLSACSH GL++ G + F  M+ D    P   H +CM+DLLGRAG ++
Sbjct: 639 G-VEYDSVSFVAVLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLME 696

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EA  +I    I   ++ W AL  AC  HGN+ LG   A  L E +      Y+LLSN+YA
Sbjct: 697 EAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYA 756

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  W+EA  +REL+K  G  K PGCSW+
Sbjct: 757 EAERWDEANKVRELMKSRGAKKNPGCSWV 785



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 173/614 (28%), Positives = 298/614 (48%), Gaps = 65/614 (10%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           R   ++N +I   +  G  D G G +  M +  V+ D  ++  VL VC D   +  GR++
Sbjct: 101 RSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV- 269
           H +  K GF   V V N L+  Y NCG   DA KVF+E      D +S+N ++ GL S+ 
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPER--DKVSWNTVI-GLCSLH 216

Query: 270 GRVEEALIRFRDMLVAS--LRPSELTFVSVMSAC------LCPRVGYQVHAQAMKSG-FE 320
           G  EEAL  FR M+ A   ++P  +T VSV+  C      +  R+   VH  A+K G   
Sbjct: 217 GFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARI---VHCYALKVGLLG 273

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            +  V NA + +Y  CG    +  +F  + E++++SWN +I++++ R     A+  +  M
Sbjct: 274 GHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLM 333

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
              G+RP+  T  S+L   G + + ++   +H F     I +++ +SN+LI  YAK+   
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSS 393

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A  IF+ M  RNI++WN +I  F  N    + ++   ++      P+  T +  L +C
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           AR+  L  GK+IH  +++      + + NA+  +Y+KCG L+ +  VFN+ + +D +S+N
Sbjct: 454 ARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISV-RDEVSYN 512

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LI  Y++  +  E++  F  M+ +G ++PD  +F  V+SAC++   +  G  I   +V 
Sbjct: 513 ILIIGYSRTNDSLESLRLFSEMRLLG-MRPDIVSFMGVVSACANLAFIRQGKEIHGLLVR 571

Query: 618 DYGFIPAEDHL---SCMLDLLGRAGYLDEAERV--------------------------- 647
                    HL   + +LDL  R G +D A +V                           
Sbjct: 572 KL----FHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDT 627

Query: 648 -------INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSN 699
                  +    ++  S ++ A+ SAC+  G +  GR    ++ +   +     Y  + +
Sbjct: 628 AINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVD 687

Query: 700 IYAAAGLWEEAANI 713
           +   AGL EEAA++
Sbjct: 688 LLGRAGLMEEAADL 701



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 148/584 (25%), Positives = 267/584 (45%), Gaps = 49/584 (8%)

Query: 25  NISLANLSRSGHYQDALHLF-VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  +   S  G Y++AL  F V + +   ++PD+ ++ + L  CA   +      +H YA
Sbjct: 207 NTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYA 266

Query: 84  LRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           L+ G L  +  V N ++ +Y       + K+VF EI   +V SW                
Sbjct: 267 LKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISW---------------- 310

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
                          NA+IT  +  G     + +FR M    +R ++ + +S+L V  + 
Sbjct: 311 ---------------NAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGEL 355

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           GL + G ++H    K      V + N+LI MY   G+   A  +F   K  V + +S+N 
Sbjct: 356 GLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFN--KMGVRNIVSWNA 413

Query: 262 MMDGLASVGRVE-EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS 317
           M+   A   R+E EA+   R M      P+ +TF +V+ AC       VG ++HA+ ++ 
Sbjct: 414 MIANFAR-NRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRV 472

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G      VSNA   MYS CG ++ A  +F  +  +D VS+N +I  Y++ N    ++  +
Sbjct: 473 GSSLDLFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLF 531

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            EM+ +G+RPD  +F  ++   A+  FI   + IH  +      T++ V+N+L+  Y + 
Sbjct: 532 SEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRC 591

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI  A ++F+ +  +++ +WNT+I G+ + G     +  F  +    +  D  +    L
Sbjct: 592 GRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVL 651

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDT 553
           S+C+    +  G++    +   N+    +    M+ L  + G ++ +  +   + I  DT
Sbjct: 652 SACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDT 711

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
             W AL+ A   HG  +  +    A + +  +KP    +  +LS
Sbjct: 712 NIWGALLGACRIHGNIELGL---WAAEHLFELKPQHCGYYILLS 752



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 188/390 (48%), Gaps = 42/390 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  + + S  G Y DAL +F ++     ++P+  ++S+ L     L     G ++H
Sbjct: 307 VISWNAIITSFSFRGKYMDALDVF-RLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVH 365

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            ++L+  +++   ++N+++ +Y                                K G   
Sbjct: 366 GFSLKMAIESDVFISNSLIDMY-------------------------------AKSGSSR 394

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  +F+KM  R++  +NAMI     N  E   + L R+M       +N +F +VL  C 
Sbjct: 395 IASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACA 454

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L  G+++H+ + + G S  + V NAL  MY  CG +  A  VF  +   V D +SY
Sbjct: 455 RLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNIS---VRDEVSY 511

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
           N+++ G +      E+L  F +M +  +RP  ++F+ V+SAC      R G ++H   ++
Sbjct: 512 NILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVR 571

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
             F  +  V+N+ + +Y+ CG+ID A  +F  +Q KD+ SWNTMI  Y  R    +AI  
Sbjct: 572 KLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINL 631

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
           +  M+  G+  D  +F ++L++    G IE
Sbjct: 632 FEAMKEDGVEYDSVSFVAVLSACSHGGLIE 661



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 21/239 (8%)

Query: 402 IEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIF-HNMS-PRNIITWNTL 458
           +   + +HA+  ++G +  ++ +  +LI  YA       +  +F H+++  R+   WNTL
Sbjct: 50  LSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTL 109

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I    + G    G   ++ ++ + ++PDE T    L  C+    +R G+++HG   K   
Sbjct: 110 IRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGF 168

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
              + +GN ++  Y  CG    +++VF+ M E+D +SWN +I   + HG  +EA+  F+ 
Sbjct: 169 DGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRV 228

Query: 579 MQDVGR-IKPDQATFTAVLSACSHA----------------GLVDDGTRIFDSMVNDYG 620
           M      I+PD  T  +VL  C+                  GL+    ++ +++V+ YG
Sbjct: 229 MVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYG 287



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 9/207 (4%)

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGN 526
           P+    HFS    + L+       + L  C    +L   KQ+H Y L +  + + +SL  
Sbjct: 17  PLTKNTHFSSFFSTSLQTSNPPNLLQL--CTLCDTLSQTKQVHAYSLLHGFLPRSVSLCA 74

Query: 527 AMITLYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           ++I  YA  G    SL +F   +   +    WN LI A +  G   +    +  M   G 
Sbjct: 75  SLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAG- 132

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +KPD+ T+  VL  CS    V  G  +   +    GF       + +L   G  G   +A
Sbjct: 133 VKPDECTYPFVLKVCSDFVEVRKGREV-HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDA 191

Query: 645 ERVINSQHIQARSDNWWALFSACAAHG 671
            +V +    + +  +W  +   C+ HG
Sbjct: 192 MKVFDEMPERDKV-SWNTVIGLCSLHG 217


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 223/688 (32%), Positives = 361/688 (52%), Gaps = 48/688 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D   L   L A  N ++   G  LH   +  GL+   +V   ++SLY +       K VF
Sbjct: 2   DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             I+NP                               ++ + N ++ G T N   D  +G
Sbjct: 62  DVIENP------------------------------FEISLCNGLMAGYTRNCMYDEALG 91

Query: 176 LFREMHKLD-VRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           LF ++     ++ D+Y++ SVL  C  GL  +  G+ +H+ + K G    + V ++L+ M
Sbjct: 92  LFDKLMCYPCLKPDSYTYPSVLKAC-GGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGM 150

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C     A K+F+E      D   +N ++      G+ EEAL  F  M      P  +
Sbjct: 151 YAKCNEFECAVKLFDEMPDK--DVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSV 208

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  + +S+C   L    G ++H + + SGF   + VS A + MY  CG+++ A  +F ++
Sbjct: 209 TITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQM 268

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL-LASSGFIEMVE-- 406
             K +V+WN+MI+ Y  +  G S I  +  M S G++P   T  S  +A S   +++E  
Sbjct: 269 PNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGK 328

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H ++  N I  +I ++++L+  Y K  +++ A  IF  M     ++WN +I+G++  G
Sbjct: 329 FVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEG 388

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
                L+ F E+  S + PD  T +  L++C+++++L  G++IH  +++ NL +   +  
Sbjct: 389 KLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMG 448

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCG ++ +  VF  + E+D +SW ++I+AY  HG   EA+  F  M     +K
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQ-SNVK 507

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD+ TF A+LSACSHAGLVDDG   F+ M+N YG IP  +H SC++ LLGRAG L EA  
Sbjct: 508 PDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYE 567

Query: 647 VINSQHIQARSDNWW---ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           ++ S      SD++     LFSAC  H NL LG  IA  L++++ D  S Y++LSN+YA+
Sbjct: 568 ILQSN--PEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYAS 625

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G W+E   +R  +K  G+ K PGCSWI
Sbjct: 626 FGKWDEVRMVRSKMKDLGLKKNPGCSWI 653



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 150/608 (24%), Positives = 265/608 (43%), Gaps = 54/608 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R+  Y +AL LF ++     LKPD Y+  + L AC  LR    G  +H   ++ G
Sbjct: 77  MAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V ++++ +Y    +     ++F E+ + DV  W T +S   + G  + A   F 
Sbjct: 137 LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYF- 195

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
                                      G+ R   +     D+ +  + +S C   L L+ 
Sbjct: 196 ---------------------------GMMR---RFGFEPDSVTITTAISSCARLLDLDR 225

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR++H  +  SGF     V  AL+ MY  CG +  A +VFE+        +++N M++G 
Sbjct: 226 GREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTV--VAWNSMINGY 283

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
              G     +  F+ M    ++P+  T  S + AC        G  VH   +++  +   
Sbjct: 284 GFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDI 343

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            ++++ + +Y  CGK++ A  IF  + +   VSWN MIS Y        A+  + EM   
Sbjct: 344 FLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKS 403

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            + PD  TF S+LA+   +  +E    IH  +    +  N  V  AL+  YAK   +++A
Sbjct: 404 FVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEA 463

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           + +F  +  R++++W ++I  +  +G   + L+ F+E+L S ++PD  T    LS+C+  
Sbjct: 464 FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523

Query: 501 SSLRHG-----KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF--NMMIEKDT 553
             +  G     + I+ Y     +I ++   + +ITL  + G L  +  +   N  I  D 
Sbjct: 524 GLVDDGLYHFNQMINVY----GIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDF 579

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
              + L SA   H      V   + + D     PD ++   +LS    +    D  R+  
Sbjct: 580 QLLSTLFSACRLHKNLDLGVEIAENLIDK---DPDDSSTYIILSNMYASFGKWDEVRMVR 636

Query: 614 SMVNDYGF 621
           S + D G 
Sbjct: 637 SKMKDLGL 644



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 9/162 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++     G   DAL LF ++  S  ++PD  + ++ LAAC+ L     G ++H   +
Sbjct: 378 NVMISGYVTEGKLFDALRLFGEMSKSF-VEPDAITFTSVLAACSQLAALEKGREIHNLIV 436

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              L     V   +L +Y     +     VF  +   D+ SWT+ ++A    G V  A E
Sbjct: 437 ERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALE 496

Query: 145 VFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           +F +M      PDR    + A+++ C+  G  D G+  F +M
Sbjct: 497 LFAEMLQSNVKPDR--VTFLAILSACSHAGLVDDGLYHFNQM 536


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 210/707 (29%), Positives = 362/707 (51%), Gaps = 43/707 (6%)

Query: 33   RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            + GH+++ L  F ++     ++PD YSLS  L  C  L     G Q+H Y +R   +  P
Sbjct: 524  KYGHFEEGLAQFCRMQE-LGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDP 582

Query: 93   HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            ++   ++ +Y                            S+C++      A  +F K+ +R
Sbjct: 583  YLETALIGMY----------------------------SSCSRPME---AWSLFGKLENR 611

Query: 153  -DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQL 210
             ++  +N MI G  ENG  +  + L+      + +  + SF    + C  G +L+FGRQ+
Sbjct: 612  SNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQV 671

Query: 211  HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            H  V K  F     V  +L+TMY   G+V DA KVF++      +    N M+      G
Sbjct: 672  HCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVEL--RNAMISAFIGNG 729

Query: 271  RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            R  +AL  +  M          T  S++S C        G  VHA+ +K   ++  ++ +
Sbjct: 730  RAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQS 789

Query: 328  AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
            A +TMY  CG  ++A  +F  ++E+D+V+W +MI+ + Q    + A+  +  M+  G++ 
Sbjct: 790  ALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKA 849

Query: 388  DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
            D     S++++   +E VE+   IH F    G+ +++ V+ +L+  Y+K    + A  +F
Sbjct: 850  DSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVF 909

Query: 445  HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +M  +N++ WN++I+ +  NG P   +    ++L      D  +++  L + + +++L 
Sbjct: 910  SSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALL 969

Query: 505  HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
             GK +H Y ++  + S + + NA+I +Y KCG L  +  +F  M  ++ ++WN++I+ Y 
Sbjct: 970  KGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYG 1029

Query: 565  QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
             HG  +EAV  FK M+      PD+ TF A++++CSH+G+V++G  +F  M  +YG  P 
Sbjct: 1030 SHGNCEEAVRLFKEMKR-SETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPR 1088

Query: 625  EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             +H + ++DLLGRAG LD+A   I    I A    W  L  AC AH N+ LG ++A  LL
Sbjct: 1089 MEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLL 1148

Query: 685  EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + E  + S YV L N+Y    +W+ AAN+R  +K  G+ K PGCSWI
Sbjct: 1149 KMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 1195



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 177/731 (24%), Positives = 341/731 (46%), Gaps = 58/731 (7%)

Query: 8    ATIAGNSNTSKELLLKL-NI----SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
            A I  N  T K+ +L+L N+     +  L + G Y  AL L  +   S  L    ++  +
Sbjct: 388  ARIIDNELTPKKAVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHS-ALTTAKFTFPS 446

Query: 63   TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
             L  CA+L N   G  +HA  +  GL++ P++A +++++Y     L S  +VF       
Sbjct: 447  LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVF------- 499

Query: 123  VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                             D   E  D  P  D+ V+N +I G  + G+ + G+  F  M +
Sbjct: 500  -----------------DKMSESRDSAP--DITVWNPVIDGYFKYGHFEEGLAQFCRMQE 540

Query: 183  LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            L +R D YS + VL +C+       GRQ+H  + ++ F     +  ALI MY +C   ++
Sbjct: 541  LGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPME 600

Query: 242  ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            A  +F + +    + +++NVM+ G    G  E++L  +      + +    +F    +AC
Sbjct: 601  AWSLFGKLENR-SNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTAC 659

Query: 302  LCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                V   G QVH   +K  F+    V  + +TMY+  G +++A  +F ++ +K++   N
Sbjct: 660  SHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRN 719

Query: 359  TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFIN 415
             MIS +        A+  Y +M++     D FT  SLL+     G  +    +HA V   
Sbjct: 720  AMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR 779

Query: 416  GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
             + +N+ + +AL++ Y K    + A  +F+ M  R+++ W ++I GF  N      L  F
Sbjct: 780  SMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLF 839

Query: 476  SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
              +    ++ D   ++  +S+   + ++  G  IHG+ +K  L S + +  +++ +Y+K 
Sbjct: 840  RAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKF 899

Query: 536  GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
            G  + +  VF+ M  K+ ++WN++IS Y+ +G  + +++    +   G    D  + T V
Sbjct: 900  GFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG-FYLDSVSITTV 958

Query: 596  LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQ 654
            L A S    +  G  +    +     IP++  + + ++D+  + G L  A+ +   +++ 
Sbjct: 959  LVAVSSVAALLKGKTLHAYQIRLQ--IPSDLQVENALIDMYVKCGCLKYAQLIF--ENMP 1014

Query: 655  ARS-DNWWALFSACAAHGN----LRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLW 707
             R+   W ++ +   +HGN    +RL +      ++R +  P     L+ I +   +G+ 
Sbjct: 1015 RRNLVTWNSMIAGYGSHGNCEEAVRLFK-----EMKRSETAPDEVTFLALITSCSHSGMV 1069

Query: 708  EEAANIRELLK 718
            EE  N+ +L++
Sbjct: 1070 EEGLNLFQLMR 1080


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 221/777 (28%), Positives = 380/777 (48%), Gaps = 68/777 (8%)

Query: 19  ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           E+   +N  +  L + G Y  AL L  +   S  L    ++  + L  CA+L N   G  
Sbjct: 18  EVSPSINSKIKALVQQGKYSQALELHSKTPHS-ALTTAKFTFPSLLKTCASLSNLYHGRT 76

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN-----PDVYSWTTFLSAC 133
           +HA  +  GL++ P++A +++++Y     L S  +VF ++       PD+  W   +   
Sbjct: 77  IHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGY 136

Query: 134 TKMGHVDY---------------------------------------------------A 142
            K GH +                                                    A
Sbjct: 137 FKYGHFEEGLAQFCRMQELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEA 196

Query: 143 CEVFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
             +F K+ +R ++  +N MI G  ENG  +  + L+      + +  + SF    + C  
Sbjct: 197 WSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSH 256

Query: 202 G-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           G +L+FGRQ+H  V K  F     V  +L+TMY   G+V DA KVF++      +    N
Sbjct: 257 GEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVEL--RN 314

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS 317
            M+      GR  +AL  +  M          T  S++S C        G  VHA+ +K 
Sbjct: 315 AMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR 374

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             ++  ++ +A +TMY  CG  ++A  +F  ++E+D+V+W +MI+ + Q    + A+  +
Sbjct: 375 SMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLF 434

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
             M+  G++ D     S++++   +E VE+   IH F    G+ +++ V+ +L+  Y+K 
Sbjct: 435 RAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKF 494

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
              + A  +F +M  +N++ WN++I+ +  NG P   +    ++L      D  +++  L
Sbjct: 495 GFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVL 554

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            + + +++L  GK +H Y ++  + S + + NA+I +Y KCG L  +  +F  M  ++ +
Sbjct: 555 VAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLV 614

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           +WN++I+ Y  HG  +EAV  FK M+      PD+ TF A++++CSH+G+V++G  +F  
Sbjct: 615 TWNSMIAGYGSHGNCEEAVRLFKEMKR-SETAPDEVTFLALITSCSHSGMVEEGLNLFQL 673

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  +YG  P  +H + ++DLLGRAG LD+A   I    I A    W  L  AC AH N+ 
Sbjct: 674 MRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNME 733

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LG ++A  LL+ E  + S YV L N+Y    +W+ AAN+R  +K  G+ K PGCSWI
Sbjct: 734 LGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 790



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 188/443 (42%), Gaps = 53/443 (11%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           KE+ L+ N  ++    +G   DAL L+ ++ +  +   D +++S+ L+ C+ + +  FG 
Sbjct: 308 KEVELR-NAMISAFIGNGRAYDALGLYNKMKAG-ETPVDSFTISSLLSGCSVVGSYDFGR 365

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +HA  ++  +++   + + +L++Y           VF  ++  DV +W           
Sbjct: 366 TVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAW----------- 414

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                                +MI G  +N      + LFR M K  V+ D+    SV+S
Sbjct: 415 --------------------GSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVIS 454

Query: 198 VCDAGL----LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
              AGL    +E G  +H    K G    V V  +L+ MY   G    A  VF       
Sbjct: 455 ---AGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNK- 510

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQV 310
            + +++N M+   +  G  E ++     +L        ++  +V+   S+      G  +
Sbjct: 511 -NLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTL 569

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA  ++    +   V NA I MY  CG +  A +IF  +  +++V+WN+MI+ Y      
Sbjct: 570 HAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNC 629

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVS 424
             A+  + EM+     PDE TF +L+ S   SG +E  E ++ F  +    G+   ++  
Sbjct: 630 EEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVE--EGLNLFQLMRIEYGVEPRMEHY 687

Query: 425 NALISAYAKNERIKQAYQIFHNM 447
            +++    +  R+  AY     M
Sbjct: 688 ASVVDLLGRAGRLDDAYSFIRGM 710


>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 207/619 (33%), Positives = 342/619 (55%), Gaps = 13/619 (2%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y+    +S   K G +  A ++F +   RD   +N MI G    G  +  +   + M +
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93

Query: 183 LDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                D YSF S+L  V   G +E G+Q+HS++ K G+   V   +AL+ MY  C  V D
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVED 153

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF+     + + +++N ++ G A VG    A      M +  +   + TF  +++  
Sbjct: 154 AFEVFKSIN--IRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLL 211

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIVSW 357
             P   ++  QVHA+ +K G  + T+V NA IT YS CG I++A  +F   ++ +D+V+W
Sbjct: 212 DDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTW 271

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFI 414
           N+M++ Y   N    A   +LEMQ +G  PD +T+ S+++++         + +H  V  
Sbjct: 272 NSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIK 331

Query: 415 NGIITNIQVSNALISAYAKN--ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            G+   + +SN+LI+ Y K+  + + +A  IF ++  ++ ++WN+++ GF  +G     L
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDAL 391

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F  +    +  D Y  S  L SC+ +++L+ G+Q+H  VLK+       + +++I +Y
Sbjct: 392 KFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMY 451

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           +KCG ++ + + F+   +  +I+WN+LI  YAQHG GK A+  F  M+D  R+K D  TF
Sbjct: 452 SKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD-RRVKLDHITF 510

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            AVL+ACSH GLV++G     SM +DYG  P  +H +CM+DLLGRAG LDEA+ +I +  
Sbjct: 511 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 570

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
            +  +  W  L  AC   G++ L   +A  LLE E ++   YVLLS+++     W E A+
Sbjct: 571 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 630

Query: 713 IRELLKRTGVIKQPGCSWI 731
           I+ L+K  GV K PG SWI
Sbjct: 631 IKRLMKERGVKKVPGWSWI 649



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 243/485 (50%), Gaps = 14/485 (2%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  KSG +  +   N +I+ Y  CG +  A K+F E      D +S+N M+ G  ++G
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR--DAVSWNTMIAGFVNLG 79

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSN 327
             E AL   + M          +F S++    C     VG QVH+  +K G+E      +
Sbjct: 80  NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+ C ++++A  +F  +  ++ V+WN +IS YAQ     +A      M+  G+  
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199

Query: 388 DEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ TF  LL         ++   +HA +  +G+ ++  V NA+I+AY++   I+ A ++F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259

Query: 445 HN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
              +  R+++TWN+++  +L+N    +  Q F E+ +    PD YT +  +S+    S  
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQ 319

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAK--CGDLDCSLRVFNMMIEKDTISWNALIS 561
             GK +HG V+K  L   + + N++I +Y K     +D +L +F  +  KD +SWN++++
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILT 379

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            ++Q G  ++A+  F+ M+    +  D   F+AVL +CS    +  G ++   +V   GF
Sbjct: 380 GFSQSGLSEDALKFFENMRS-QYVVIDHYAFSAVLRSCSDLATLQLGQQV-HVLVLKSGF 437

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P     S ++ +  + G +++A +  ++   +  S  W +L    A HG  ++   +  
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATP-KDSSIAWNSLIFGYAQHGRGKIALDLFF 496

Query: 682 LLLER 686
           L+ +R
Sbjct: 497 LMKDR 501



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 250/569 (43%), Gaps = 46/569 (8%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI + + G   TS+   +  N  +A     G+++ AL  F++    +    D YS  + L
Sbjct: 51  RIASKMFGE--TSQRDAVSWNTMIAGFVNLGNFETALE-FLKSMKRYGFAVDGYSFGSIL 107

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
              A +     G Q+H+  ++ G +      + +L +Y                      
Sbjct: 108 KGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY---------------------- 145

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
                     K   V+ A EVF  +  R+   +NA+I+G  + G       L   M    
Sbjct: 146 ---------AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEG 196

Query: 185 VRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  D+ +FA +L++ D   L +   Q+H+ + K G +   +V NA+IT Y  CG++ DA 
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
           +VF+ A     D +++N M+       + EEA   F +M V    P   T+ SV+SA   
Sbjct: 257 RVFDGAI-ETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFE 315

Query: 304 PR---VGYQVHAQAMKSGFEAYTSVSNAAITMY--SSCGKIDEACMIFARLQEKDIVSWN 358
                 G  +H   +K G E    +SN+ I MY  S    +DEA  IF  L+ KD VSWN
Sbjct: 316 GSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWN 375

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFIN 415
           ++++ ++Q  L   A+  +  M+S  +  D + F ++L S      +++ + +H  V  +
Sbjct: 376 SILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS 435

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G   N  V+++LI  Y+K   I+ A + F      + I WN+LI G+  +G     L  F
Sbjct: 436 GFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLF 495

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAK 534
             +    ++ D  T    L++C+ I  +  G      +  +  +  +M     MI L  +
Sbjct: 496 FLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGR 555

Query: 535 CGDLDCSLRVFNMM-IEKDTISWNALISA 562
            G LD +  +   M  E D + W  L+ A
Sbjct: 556 AGRLDEAKALIEAMPFEPDAMVWKTLLGA 584



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 195/433 (45%), Gaps = 49/433 (11%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+HA  ++ GL +   V N I++ Y     +   +RVF                     
Sbjct: 221 TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF--------------------- 259

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              D A E       RDL  +N+M+     N  E+    LF EM  L    D Y++ SV+
Sbjct: 260 ---DGAIET------RDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVI 310

Query: 197 SVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYF--NCGNVVDACKVFEEAKGYV 253
           S    G  +  G+ LH LV K G   LV + N+LI MY   +  ++ +A  +FE  +   
Sbjct: 311 SAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENK- 369

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
            DH+S+N ++ G +  G  E+AL  F +M    +      F +V+ +C      ++G QV
Sbjct: 370 -DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQV 428

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +KSGFE    V+++ I MYS CG I++A   F    +   ++WN++I  YAQ   G
Sbjct: 429 HVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRG 488

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVS 424
           + A+  +  M+   ++ D  TF ++L +   I +VE    + F+       GI   ++  
Sbjct: 489 KIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVE--EGWSFLKSMESDYGIPPRMEHY 546

Query: 425 NALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +I    +  R+ +A  +   M    + + W TL+      G      Q  S LL  EL
Sbjct: 547 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL--EL 604

Query: 484 RPDEYTLSVALSS 496
            P+E+   V LSS
Sbjct: 605 EPEEHCTYVLLSS 617



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 48/388 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  LA    +   ++A  LF+++      +PDIY+ ++ ++A     +   G  LH
Sbjct: 268 LVTWNSMLAAYLVNNQEEEAFQLFLEMQVL-GFEPDIYTYTSVISAAFEGSHQGQGKSLH 326

Query: 81  AYALRAGLKAYPHVANTILSLY--KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
              ++ GL+    ++N+++++Y   +++ +     +F  ++N D  SW            
Sbjct: 327 GLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSW------------ 374

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              N+++TG +++G  +  +  F  M    V  D+Y+F++VL  
Sbjct: 375 -------------------NSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRS 415

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C D   L+ G+Q+H LV KSGF     V ++LI MY  CG + DA K F+         I
Sbjct: 416 CSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPK--DSSI 473

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA----Q 313
           ++N ++ G A  GR + AL  F  M    ++   +TFV+V++A  C  +G         +
Sbjct: 474 AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTA--CSHIGLVEEGWSFLK 531

Query: 314 AMKSGFEAYTSVSNAA--ITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMISTYAQRNLG 370
           +M+S +     + + A  I +    G++DEA  +I A   E D + W T++   A R  G
Sbjct: 532 SMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLG--ACRTCG 589

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS 398
              + + +    + + P+E     LL+S
Sbjct: 590 DIELASQVASHLLELEPEEHCTYVLLSS 617


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 226/714 (31%), Positives = 371/714 (51%), Gaps = 74/714 (10%)

Query: 56   DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH---VANTILSLYKNARDLVSVK 112
            D ++    L A A + +   G Q+HA+  + G  A P    VAN+++++Y    DL + +
Sbjct: 329  DNFAFPAVLKAAAAVHDLCLGKQIHAHVFKFG-HAPPSSVAVANSLVNMYGKCGDLTAAR 387

Query: 113  RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMI-TGCTENGYED 171
                                           +VFD +PDRD   +N+MI T C    +E 
Sbjct: 388  -------------------------------QVFDDIPDRDHVSWNSMIATLCRFEEWE- 415

Query: 172  IGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            + + LFR M   +V   +++  SV   C    G +  G+Q+H+   ++G        NAL
Sbjct: 416  LSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTNNAL 474

Query: 230  ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            +TMY   G V DA  +F    G   D +S+N ++  L+   R EEAL+    M+V  +RP
Sbjct: 475  VTMYARLGRVNDAKALFGVFDGK--DLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRP 532

Query: 290  SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS-VSNAAITMYSSCGKIDEACMI 345
              +T  SV+ AC      R+G ++H  A+++G     S V  A + MY +C +  +  ++
Sbjct: 533  DGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLV 592

Query: 346  FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIEM 404
            F  +  + +  WN +++ YA+      A+  ++EM S     P+  TF S+L +    ++
Sbjct: 593  FDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKV 652

Query: 405  V---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
                E IH ++   G   +  V NAL+  Y++  R++ +  IF  M+ R+I++WNT+I G
Sbjct: 653  FSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITG 712

Query: 462  FLLNGFPVQGLQHFSELLMSE------------------LRPDEYTLSVALSSCARISSL 503
             ++ G     L    E+   +                   +P+  TL   L  CA +++L
Sbjct: 713  CIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAAL 772

Query: 504  RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
              GK+IH Y +K  L   +++G+A++ +YAKCG L+ + RVF+ M  ++ I+WN LI AY
Sbjct: 773  GKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAY 832

Query: 564  AQHGEGKEAVSCFKAMQDVGR-----IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
              HG+G+EA+  F+ M   G      I+P++ T+ A+ +ACSH+G+VD+G  +F +M   
Sbjct: 833  GMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKAS 892

Query: 619  YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLRLGR 677
            +G  P  DH +C++DLLGR+G + EA  +IN+      + D W +L  AC  H ++  G 
Sbjct: 893  HGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGE 952

Query: 678  IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            I A  L   E +  S YVL+SNIY++AGLW++A  +R+ +K  GV K+PGCSWI
Sbjct: 953  IAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWI 1006



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 146/581 (25%), Positives = 254/581 (43%), Gaps = 76/581 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA-FGNQLHAYA 83
           N  +A L R   ++ +LHLF ++  S  + P  ++L +   AC+++R     G Q+HAY 
Sbjct: 402 NSMIATLCRFEEWELSLHLF-RLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460

Query: 84  LRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           LR G L+ Y +  N ++++Y     +   K +F      D+ SW T +S+ ++       
Sbjct: 461 LRNGDLRTYTN--NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQN------ 512

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA- 201
               D+  +  + VY  ++ G                     VR D  + ASVL  C   
Sbjct: 513 ----DRFEEALMYVYLMIVDG---------------------VRPDGVTLASVLPACSQL 547

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGYVCDHIS-Y 259
             L  GR++H    ++G     S V  AL+ MY NC        VF+   G V   ++ +
Sbjct: 548 ERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFD---GVVRRTVAVW 604

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           N ++ G A     ++AL  F +M+  S   P+  TF SV+ AC+  +V      +H   +
Sbjct: 605 NALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIV 664

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS------------- 362
           K GF     V NA + MYS  G+++ +  IF R+ ++DIVSWNTMI+             
Sbjct: 665 KRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALN 724

Query: 363 -----TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFI 414
                   Q   G    + Y +   V  +P+  T  ++L     +  +   + IHA+   
Sbjct: 725 LLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK 784

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
             +  ++ V +AL+  YAK   +  A ++F  M  RN+ITWN LI  + ++G   + L+ 
Sbjct: 785 QKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALEL 844

Query: 475 FSELLMSE------LRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNA 527
           F  +          +RP+E T     ++C+    +  G  + H     + +  +      
Sbjct: 845 FRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYAC 904

Query: 528 MITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQH 566
           ++ L  + G +  +  + N M        +W++L+ A   H
Sbjct: 905 LVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIH 945



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 215/476 (45%), Gaps = 72/476 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +++LS++  +++AL ++V +     ++PD  +L++ L AC+ L     G ++H
Sbjct: 499 LVSWNTVISSLSQNDRFEEAL-MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIH 557

Query: 81  AYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            YALR G L     V   ++ +Y N +                            K G +
Sbjct: 558 CYALRNGDLIENSFVGTALVDMYCNCKQ--------------------------PKKGRL 591

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSV 198
                VFD +  R + V+NA++ G   N ++D  + LF EM  + +   +  +FASVL  
Sbjct: 592 -----VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPA 646

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C    +      +H  + K GF     V NAL+ MY   G V  +  +F        D +
Sbjct: 647 CVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR--DIV 704

Query: 258 SYNVMMDGLASVGRVEEAL------------------IRFRDMLVASLRPSELTFVSVMS 299
           S+N M+ G    GR ++AL                  + + D      +P+ +T ++V+ 
Sbjct: 705 SWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLP 764

Query: 300 ACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C        G ++HA A+K       +V +A + MY+ CG ++ A  +F ++  +++++
Sbjct: 765 GCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVIT 824

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVG------IRPDEFTFGSLLAS---SGFI-EMVE 406
           WN +I  Y     G  A+  +  M + G      IRP+E T+ ++ A+   SG + E + 
Sbjct: 825 WNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLH 884

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN---IITWNTLI 459
           + H     +G+         L+    ++ R+K+AY++ + M P N   +  W++L+
Sbjct: 885 LFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTM-PSNLNKVDAWSSLL 939



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 138/261 (52%), Gaps = 12/261 (4%)

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MV 405
           ++ +    W  ++ +    +  R AI  Y  M +    PD F F ++L ++  +    + 
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 406 EMIHAFVFING--IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           + IHA VF  G    +++ V+N+L++ Y K   +  A Q+F ++  R+ ++WN++I    
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIA--T 407

Query: 464 LNGFPVQGLQ-HFSELLMSE-LRPDEYTLSVALSSCARI-SSLRHGKQIHGYVLKNNLIS 520
           L  F    L  H   L++SE + P  +TL     +C+ +   +R GKQ+H Y L+N  + 
Sbjct: 408 LCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLR 467

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
             +  NA++T+YA+ G ++ +  +F +   KD +SWN +IS+ +Q+   +EA+  +  + 
Sbjct: 468 TYT-NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL-MYVYLM 525

Query: 581 DVGRIKPDQATFTAVLSACSH 601
            V  ++PD  T  +VL ACS 
Sbjct: 526 IVDGVRPDGVTLASVLPACSQ 546


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 189/535 (35%), Positives = 319/535 (59%), Gaps = 10/535 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GR++H+ + KSG      + N L++MY  CG++ DA +VF+  +    + +S+  M+
Sbjct: 63  LEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDR--NIVSWTAMI 120

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
           +   +  +  EA   +  M +A  +P ++TFVS+++A   P   ++G +VH + +++G E
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  + + MY+ CG I +A +IF RL EK++V+W  +I+ YAQ+     A+     M
Sbjct: 181 LEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM 240

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q   + P++ TF S+L    +   +E  + +H ++  +G    + V N+LI+ Y K   +
Sbjct: 241 QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGL 300

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           ++A ++F ++  R+++TW  ++ G+   GF  + +  F  +    ++PD+ T +  L+SC
Sbjct: 301 EEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSC 360

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +  + L+ GK+IH  ++       + L +A++++YAKCG +D +  VFN M E++ ++W 
Sbjct: 361 SSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWT 420

Query: 558 ALISAY-AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           A+I+   AQHG  +EA+  F  M+  G IKPD+ TFT+VLSAC+H GLV++G + F SM 
Sbjct: 421 AIITGCCAQHGRCREALEYFDQMKKQG-IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 479

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            DYG  P  +H SC +DLLGRAG+L+EAE VI S         W AL SAC  H ++  G
Sbjct: 480 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERG 539

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              A  +L+ + D    YV LS+IYAAAG +E+A  +R+++++  V+K+PG SWI
Sbjct: 540 ERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWI 594



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 157/618 (25%), Positives = 290/618 (46%), Gaps = 50/618 (8%)

Query: 10  IAGNSNTSKELLLKLNISLANLSRSGHYQDALHLF-VQIHSSHKLKPDIYSLSTTLAACA 68
           + GN+   K   L  +  ++ L ++G  ++AL +    I    ++  D++     L  CA
Sbjct: 1   MPGNAGFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFR--GLLQECA 58

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
            LR+   G ++HA  L++G++   ++ NT+LS+Y                          
Sbjct: 59  RLRSLEQGREVHAAILKSGIQPNRYLENTLLSMY-------------------------- 92

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
                 K G +  A  VFD + DR++  + AMI               +  M     + D
Sbjct: 93  -----AKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPD 147

Query: 189 NYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             +F S+L +  +  LL+ G+++H  + ++G      V  +L+ MY  CG++  A  +F+
Sbjct: 148 KVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFD 207

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
                  + +++ +++ G A  G+V+ AL     M  A + P+++TF S++  C  P   
Sbjct: 208 RLPEK--NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G +VH   ++SG+     V N+ ITMY  CG ++EA  +F+ L  +D+V+W  M++ Y
Sbjct: 266 EHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGY 325

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
           AQ      AI  +  MQ  GI+PD+ TF S+L   +S  F++  + IH  +   G   ++
Sbjct: 326 AQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDV 385

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL-NGFPVQGLQHFSELLM 480
            + +AL+S YAK   +  A  +F+ MS RN++ W  +I G    +G   + L++F ++  
Sbjct: 386 YLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKK 445

Query: 481 SELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
             ++PD+ T +  LS+C  +  +  G K      L   +   +   +  + L  + G L+
Sbjct: 446 QGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLE 505

Query: 540 CSLRV-FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQATFTAVLS 597
            +  V  +M        W AL+SA   H + +      +A ++V ++ P D   + A+ S
Sbjct: 506 EAENVILSMPFIPGPSVWGALLSACRVHSDVERGE---RAAENVLKLDPDDDGAYVALSS 562

Query: 598 ACSHAGLVDDGTRIFDSM 615
             + AG  +D  ++   M
Sbjct: 563 IYAAAGRYEDAEKVRQVM 580



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 97/180 (53%), Gaps = 3/180 (1%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  CAR+ SL  G+++H  +LK+ +     L N ++++YAKCG L  + RVF+ + +++ 
Sbjct: 54  LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNI 113

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW A+I A+    +  EA  C++ M+  G  KPD+ TF ++L+A ++  L+  G ++  
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAG-CKPDKVTFVSLLNAFTNPELLQLGQKVHM 172

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
            +V + G        + ++ +  + G + +A RVI  +  +     W  L +  A  G +
Sbjct: 173 EIV-EAGLELEPRVGTSLVGMYAKCGDISKA-RVIFDRLPEKNVVTWTLLIAGYAQQGQV 230


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  362 bits (928), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 226/653 (34%), Positives = 345/653 (52%), Gaps = 66/653 (10%)

Query: 141 YACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           YA  + +++P     V+  N +I      G       L+R+M  L    D+Y+F  V   
Sbjct: 209 YAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKA 268

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCD 255
           C +   L  G  LH+ V++SGF+  V V NA+++MY  CG +  A  +F++   +G + D
Sbjct: 269 CANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRG-IQD 327

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLCPRV---GYQVH 311
            +S+N ++           AL  F  M    L  P  ++ V+++ AC        G QVH
Sbjct: 328 LVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVH 387

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM----------- 360
             +++SG      V NA + MY+ CGK++EA  +F R++ KD+VSWN M           
Sbjct: 388 GFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLE 447

Query: 361 ------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
                                   I+ YAQR  G  A+  + +M   G RP+  T  SLL
Sbjct: 448 HALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLL 507

Query: 397 ASSGFIEMVEMIH-------AFVFINGI------ITNIQVSNALISAYAKNERIKQAYQI 443
             S  + +  ++H       A  FI  +        +++V N LI  YAK +  + A ++
Sbjct: 508 --SACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKM 565

Query: 444 FHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSVALSSCAR 499
           F ++SP  R+++TW  +I G+  +G     LQ FS +   +  ++P+++TLS AL +CAR
Sbjct: 566 FDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACAR 625

Query: 500 ISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           +++LR G+Q+H YVL+N   S M  + N +I +Y+K GD+D +  VF+ M +++ +SW +
Sbjct: 626 LAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTS 685

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           L++ Y  HG G++A+  F  M+ V  + PD  TF  VL ACSH+G+VD G   F+ M  D
Sbjct: 686 LMTGYGMHGRGEDALRVFDEMRKVPLV-PDGITFLVVLYACSHSGMVDHGINFFNRMSKD 744

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G  P  +H +CM+DL GRAG L EA ++IN   ++     W AL SAC  H N+ LG  
Sbjct: 745 FGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEF 804

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  LLE E      Y LLSNIYA A  W++ A IR  +KRTG+ K+PGCSWI
Sbjct: 805 AANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWI 857



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 217/454 (47%), Gaps = 32/454 (7%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL LF ++ + H + PD+ SL   L ACA+L  +  G Q+H +++R+GL     V N ++
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVV 406

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR----DLP 155
            +Y     +    +VF  ++  DV SW   ++  ++ G +++A  +F++M +     D+ 
Sbjct: 407 DMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVV 466

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
            + A+ITG  + G     + +FR+M     R +  +  S+LS C   G L  G++ H   
Sbjct: 467 TWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYA 526

Query: 215 TK---------SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            K          G   L  V+N LI MY  C +   A K+F+       D +++ VM+ G
Sbjct: 527 IKFILNLDGPDPGADDL-KVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585

Query: 266 LASVGRVEEALIRFRDM--LVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF- 319
            A  G    AL  F  M  +  S++P++ T    + AC      R G QVHA  +++ + 
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYG 645

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V+N  I MYS  G +D A ++F  + +++ VSW ++++ Y     G  A+  + E
Sbjct: 646 SVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDE 705

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAK 433
           M+ V + PD  TF  +L +     MV+  H   F N +  +  V         ++  + +
Sbjct: 706 MRKVPLVPDGITFLVVLYACSHSGMVD--HGINFFNRMSKDFGVDPGPEHYACMVDLWGR 763

Query: 434 NERIKQAYQIFHN--MSPRNIITWNTLINGFLLN 465
             R+ +A ++ +   M P  ++ W  L++   L+
Sbjct: 764 AGRLGEAMKLINEMPMEPTPVV-WVALLSACRLH 796



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 157/593 (26%), Positives = 254/593 (42%), Gaps = 95/593 (16%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  +D   L+ Q+  S    PD Y+      ACANL + + G  LHA   R+G  +   V
Sbjct: 238 GSPRDVFTLYRQM-KSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFV 296

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            N ++S+Y     L     +F ++ +    D+ SW + +SA       + A  +F KM  
Sbjct: 297 CNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTT 356

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQL 210
           R L                              +  D  S  ++L  C +      GRQ+
Sbjct: 357 RHL------------------------------MSPDVISLVNILPACASLAASLRGRQV 386

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    +SG    V V NA++ MY  CG + +A KVF+  K    D +S+N M+ G +  G
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMK--FKDVVSWNAMVTGYSQAG 444

Query: 271 RVE-----------------------------------EALIRFRDMLVASLRPSELTFV 295
           R+E                                   EAL  FR M     RP+ +T V
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504

Query: 296 SVMSACLCPRV---GYQVHAQAMK-----SGFEAYT---SVSNAAITMYSSCGKIDEACM 344
           S++SAC+       G + H  A+K      G +       V N  I MY+ C   + A  
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARK 564

Query: 345 IFARL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLLASSG 400
           +F  +  +++D+V+W  MI  YAQ     +A+  +  M  +   I+P++FT    L +  
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACA 624

Query: 401 FIEMVEM---IHAFVFIN--GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            +  +     +HA+V  N  G +  + V+N LI  Y+K+  +  A  +F NM  RN ++W
Sbjct: 625 RLAALRFGRQVHAYVLRNFYGSVM-LFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSW 683

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
            +L+ G+ ++G     L+ F E+    L PD  T  V L +C+    + HG      + K
Sbjct: 684 TSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSK 743

Query: 516 NNLISKMSLGNA-MITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQH 566
           +  +       A M+ L+ + G L  ++++ N M +E   + W AL+SA   H
Sbjct: 744 DFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLH 796



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFL 463
           +++H    + G++    ++  LI  Y  +     A  +   +  SP ++  WN LI   L
Sbjct: 178 KLLHQQSIMQGLL--FHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRAL 235

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             G P      + ++      PD YT      +CA +SSL  G  +H  V ++   S + 
Sbjct: 236 HLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVF 295

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           + NA++++Y KCG L  +  +F+ +  +   D +SWN+++SAY    +   A++ F  M 
Sbjct: 296 VCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMT 355

Query: 581 DVGRIKPDQATFTAVLSAC-----SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
               + PD  +   +L AC     S  G    G  I   +V+D  F+      + ++D+ 
Sbjct: 356 TRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV-FVG-----NAVVDMY 409

Query: 636 GRAGYLDEAERVIN 649
            + G ++EA +V  
Sbjct: 410 AKCGKMEEANKVFQ 423


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 235/717 (32%), Positives = 372/717 (51%), Gaps = 48/717 (6%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N+ +  L RSG  ++AL L      S  +  D  S    L  C+ +R+   G + H + 
Sbjct: 64  VNLHIQRLCRSGDLEEALGLL----GSDGV--DDRSYGAVLQLCSEVRSLEGGKRAH-FL 116

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +RA             SL ++  D V  +++              +L    K G ++ A 
Sbjct: 117 VRAS------------SLGRDGMDNVLGQKLV-----------LMYL----KCGDLENAR 149

Query: 144 EVFDKMPD-RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
            VFD+MP   D+ V+ A+++G  + G    G+ LFR+MH   VR D Y+ + VL  C AG
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLK-CIAG 208

Query: 203 L--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           L  +E G  +H L+ K GF    +V NAL+  Y       DA  VF+       D IS+N
Sbjct: 209 LGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR--DVISWN 266

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS 317
            M+ G  S G  ++A+  F  M +        T +SV+ AC    +   G  VH  ++K+
Sbjct: 267 SMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKT 326

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF + TS++N  + MYS+C        IF  + +K++VSW  MI++Y +  L       +
Sbjct: 327 GFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLF 386

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            EM   G RPD F   S L   A +  ++  + +H +   NG+   + V+NAL+  Y K 
Sbjct: 387 QEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKC 446

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +++A  IF  +  +++I+WNTLI G+  N    +    F+E+L+ +LRP+  T++  L
Sbjct: 447 GNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCIL 505

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            + A +SSL  G+++H Y L+   +    + NA+I +Y KCG L  + R+F+ +  K+ I
Sbjct: 506 PAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLI 565

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SW  +++ Y  HG G++A++ F+ M+  G I PD A+F+A+L ACSH+GL D+G R FD+
Sbjct: 566 SWTIMVAGYGMHGRGRDAIALFEQMRVSG-IAPDAASFSAILYACSHSGLRDEGWRFFDA 624

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  ++   P   H +CM+DLL   G L EA   I+S  I+  S  W +L   C  H N++
Sbjct: 625 MRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVK 684

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L   +A  + E E +    YVLL+NIYA A  WE    ++  +   G+ +  GCSWI
Sbjct: 685 LAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWI 741



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 214/452 (47%), Gaps = 48/452 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  + +G Y  A+ LFV++    + + D  +L + L ACA L     G  +H
Sbjct: 262 VISWNSMISGCTSNGLYDKAIELFVRMWLEGE-ELDSATLLSVLPACAELHLLFLGRVVH 320

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y+++ G  +   +AN +L +Y N  D  S  ++F  +   +V SWT  +++ T+ G   
Sbjct: 321 GYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAG--- 377

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVC 199
               ++DK+                         GLF+EM     R D ++  S L +  
Sbjct: 378 ----LYDKVA------------------------GLFQEMGLEGTRPDIFAITSALHAFA 409

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHIS 258
              LL+ G+ +H    ++G   +++V NAL+ MY  CGN+ +A  +F+   G V  D IS
Sbjct: 410 GNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFD---GVVSKDMIS 466

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N ++ G +      EA   F +ML+  LRP+ +T   ++ A         G ++HA A+
Sbjct: 467 WNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSLERGREMHAYAL 525

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           + G+     V+NA I MY  CG +  A  +F RL  K+++SW  M++ Y     GR AI 
Sbjct: 526 RRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIA 585

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSNALISAY 431
            + +M+  GI PD  +F ++L   + SG   E      A    + I   ++    ++   
Sbjct: 586 LFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLL 645

Query: 432 AKNERIKQAYQIFHNM--SPRNIITWNTLING 461
                +K+AY+   +M   P + I W +L+ G
Sbjct: 646 INTGNLKEAYEFIDSMPIEPDSSI-WVSLLRG 676


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 213/626 (34%), Positives = 341/626 (54%), Gaps = 20/626 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+Y  +  +S   K G + YA  +F KM  R++   N +I G       +  + LF EM 
Sbjct: 318 DLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM- 376

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGR----QLHSLVTKSGF-SCLVSVVNALITMYFN 235
           K  V  +  S+  +L+   +  +LE G+    ++H+ + +SG  +  +++ N LI MY  
Sbjct: 377 KDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAK 436

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG + DAC VF        D +++N M+ GL    +  EA+  F++M    L PS  T +
Sbjct: 437 CGAINDACVVFRLMDNK--DSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMI 494

Query: 296 SVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S +S+C       VG Q+H + +K G +   SVSNA + +Y  CG + E    F+ + + 
Sbjct: 495 SALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY 554

Query: 353 DIVSWNTMISTYAQRNLGR-SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           D VSWN++I   A        A+ ++L M   G  P+  TF ++LA+   + + E+   I
Sbjct: 555 DHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI 614

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGF 467
           HA V    +  +  + NAL++ Y K   +     IF  MS R + ++WN++I+G++ N  
Sbjct: 615 HALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNEL 674

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +     ++    R D +T +  LS+CA +++L  G ++HG  ++  L S + +G+A
Sbjct: 675 LPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA 734

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YAKCG +D + R F MM  ++  SWN++IS YA+HG G +++  F  M+  G + P
Sbjct: 735 LVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPL-P 793

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  VLSACSHAGLV++G   FDSM   YG  P  +H SCM+DLLGR G L++ E  
Sbjct: 794 DHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDF 853

Query: 648 INSQHIQARSDNWWALFSACA-AHG-NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +N   ++     W  +  AC  A+G N  LGR  A +LLE E      Y+LLSN+YA+ G
Sbjct: 854 LNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGG 913

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++ A  R  +++  V K+ GCSW+
Sbjct: 914 KWDDVAKTRVAMRKAFVKKEAGCSWV 939



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/513 (30%), Positives = 268/513 (52%), Gaps = 28/513 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++   T ++   ++G +    +VFD+MP R+L  ++ +I+G T N   +    LFR+M 
Sbjct: 107 DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMV 166

Query: 182 KLDVRRDNYSFASVLSVC-DAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                 ++Y+F SV+  C + G   L+FG Q+H L++K+ +   V+  N LI+MY N   
Sbjct: 167 SDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALG 226

Query: 239 VVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF----RDMLVASLRPSELT 293
           +VD A + F+    +  + +S N M+      G    A   F    ++++   L+P+E T
Sbjct: 227 MVDYARRAFDSI--WPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYT 284

Query: 294 FVSVMSA-CLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           F S++SA C     G     Q+  +  KSGF     V +A ++ ++  G I  A  IF +
Sbjct: 285 FGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQK 344

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVE- 406
           +  +++VS N +I    ++  G  A+  ++EM+ SV + P+ +    +L +     ++E 
Sbjct: 345 MSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPEFHVLEN 402

Query: 407 ------MIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
                  +HAF+  +G++   I + N LI+ YAK   I  A  +F  M  ++ +TWN++I
Sbjct: 403 GKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMI 462

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            G   N   ++ ++ F E+  +EL P  +T+  ALSSCA +  +  G+Q+H   LK  L 
Sbjct: 463 TGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLD 522

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK-EAVSCFKA 578
             +S+ NA++ LY +CG +    + F++M++ D +SWN+LI A A       EAV  F  
Sbjct: 523 LDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLV 582

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           M   G   P++ TF  +L+A S   L + G +I
Sbjct: 583 MMRAG-WDPNRVTFITILAAVSSLSLHELGKQI 614



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 282/597 (47%), Gaps = 60/597 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLS-TTLAACANLRNAAF-GNQ 78
           ++ LN  +  L R    ++A+ LF+++  S +L P+ Y +  T       L N    G++
Sbjct: 350 VVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSE 409

Query: 79  LHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +HA+ +R+G L A   + N ++++Y                                K G
Sbjct: 410 VHAFLIRSGLLNAQIAIGNGLINMY-------------------------------AKCG 438

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            ++ AC VF  M ++D   +N+MITG  +N      +  F+EM + ++   N++  S LS
Sbjct: 439 AINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALS 498

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C + G +  G QLH    K G    VSV NAL+ +Y  CG V +  K F     Y  DH
Sbjct: 499 SCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDY--DH 556

Query: 257 ISYNVMMDGLA-SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
           +S+N ++  LA S   + EA+  F  M+ A   P+ +TF+++++A        +G Q+HA
Sbjct: 557 VSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHA 616

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGR 371
             +K    A T++ NA +  Y  CG +     IF+R+ ++ D VSWN+MIS Y    L  
Sbjct: 617 LVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLP 676

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A+     M   G R D FTF ++L++   +  +E    +H       + ++I + +AL+
Sbjct: 677 KAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALV 736

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK  RI  A + F  M  RN+ +WN++I+G+  +G   + L  F+++ +    PD  
Sbjct: 737 DMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHV 796

Query: 489 TLSVALSSCARISSLRHG-------KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           T    LS+C+    +  G        +I+G      L  +M   + M+ L  + G+L+  
Sbjct: 797 TFVGVLSACSHAGLVNEGFSHFDSMSEIYG------LAPRMEHFSCMVDLLGRVGELNKM 850

Query: 542 LRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
               N M ++ + + W  ++ A  +   G+      +A + +  ++P  A    +LS
Sbjct: 851 EDFLNQMPVKPNVLIWRTVLGACCR-ANGRNTALGRRAAEMLLEMEPTNAVNYILLS 906



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 155/314 (49%), Gaps = 14/314 (4%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           ++H Q  K+GF     + N  I +Y+  G +     +F  +  +++VSW+ +IS Y +  
Sbjct: 94  ELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRNR 153

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG-----FIEMVEMIHAFVFINGIITNIQV 423
           +   A   + +M S G  P+ + FGS++ +        ++    IH  +     + ++  
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTA 213

Query: 424 SNALISAYAKN-ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS----EL 478
           SN LIS Y      +  A + F ++ PRN+++ N++I+ +   G  V     FS    E+
Sbjct: 214 SNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEV 273

Query: 479 LMSELRPDEYTLSVALSSCARI--SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +   L+P+EYT    +S+   +  S L   +Q+   V K+  +  + +G+A+++ +AK G
Sbjct: 274 MGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAG 333

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  +  +F  M  ++ +S N LI    +   G+EAV  F  M+D   + P+  ++  +L
Sbjct: 334 SIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN--SYMIIL 391

Query: 597 SACSHAGLVDDGTR 610
           +A     ++++G R
Sbjct: 392 TAFPEFHVLENGKR 405



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 114/209 (54%), Gaps = 9/209 (4%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  +F NG + ++ + N LI+ YA+   +    ++F  M  RN+++W+ LI+G+  N
Sbjct: 93  EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS--LRHGKQIHGYVLKNNLISKMS 523
             P +  + F +++     P+ Y     + +C       L+ G QIHG + K   ++ ++
Sbjct: 153 RMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVT 212

Query: 524 LGNAMITLYAKC-GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD- 581
             N +I++Y    G +D + R F+ +  ++ +S N++IS Y Q G+   A   F  MQ  
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272

Query: 582 -VGR-IKPDQATFTAVLSA-CS--HAGLV 605
            +G  +KP++ TF +++SA CS  ++GLV
Sbjct: 273 VMGDGLKPNEYTFGSLISATCSLANSGLV 301



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 453 ITWNTLINGFLLNGFPVQ---GLQHFSELLMSELRPDEYTLSVALS---SCARISSLRHG 506
           + +N   N    +  P+Q    L   S+L  + ++ DE   S+A     SC      +  
Sbjct: 37  LLFNPFTNPLPPSSIPLQVLVDLYKSSQLHHNPVQHDEKIESLAQRYRYSCGS----KDA 92

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +++H  + KN  ++ + L N +I +YA+ GDL    +VF+ M  ++ +SW+ LIS Y ++
Sbjct: 93  EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
               EA   F+ M   G   P+   F +V+ AC   G
Sbjct: 153 RMPNEACELFRKMVSDG-FMPNHYAFGSVIRACQECG 188


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  361 bits (926), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 214/638 (33%), Positives = 340/638 (53%), Gaps = 17/638 (2%)

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           ++K AR     KR  S +   +  S T  LS+  + G++  A ++F+ M   D  ++N M
Sbjct: 42  IFKTARS----KRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVM 97

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSG 218
           I G  +NG     +  +  M    VR DN+++  V+  C  GL +   G ++H  V KSG
Sbjct: 98  IRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKAC-GGLYDLAEGERVHGKVIKSG 156

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
               + + N+LI MY   G +  A  VF E    V D +S+N M+ G  SVG    +L  
Sbjct: 157 LDLDIYIGNSLIIMYAKIGCIESAEMVFREMP--VRDLVSWNSMISGYVSVGDGWRSLSC 214

Query: 279 FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           FR+M  + ++    + + ++ AC      R G ++H Q M+S  E    V  + + MY+ 
Sbjct: 215 FREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAK 274

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGS 394
           CG++D A  +F ++ +K IV+WN MI  Y+       +     +MQ  G + PD  T  +
Sbjct: 275 CGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMIN 334

Query: 395 LLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           LL     +E +   + +H F   NG + ++ +  AL+  Y +  ++K A  +F  M+ RN
Sbjct: 335 LLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERN 394

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +I+WN +I  +  NG   + +  F +L    L+PD  T++  L + A ++SLR  +QIHG
Sbjct: 395 LISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHG 454

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           YV K  L S   + N+++ +Y KCG+L  +  +F+ M  KD ISWN +I AYA HG G+ 
Sbjct: 455 YVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRI 514

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
           ++  F  M++ G  +P+ +TF ++L +CS AGLV++G   F+SM  DY   P  +H  C+
Sbjct: 515 SIELFSEMREKG-FEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCI 573

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
           LDL+GR G LD A+  I    +   +  W +L +A    G++ L  I A  +L  E D  
Sbjct: 574 LDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNT 633

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
             YVLLSN+YA AG WE+   I+  +K+ G+ K  GCS
Sbjct: 634 GCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCS 671



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/556 (23%), Positives = 258/556 (46%), Gaps = 48/556 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +     +G + DA+  + ++     ++ D ++    + AC  L + A G ++H   +
Sbjct: 95  NVMIRGFVDNGLFWDAVDFYHRMEFG-GVRGDNFTYPFVIKACGGLYDLAEGERVHGKVI 153

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL    ++ N+++ +Y     + S + VF E+   D+ SW + +S    +G       
Sbjct: 154 KSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVG------- 206

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                                 +G+  +    FREM    ++ D +S   +L  C   G 
Sbjct: 207 ----------------------DGWRSLSC--FREMQASGIKLDRFSVIGILGACSLEGF 242

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNV 261
           L  G+++H  + +S     V V  +L+ MY  CG +  A ++F++    + D   +++N 
Sbjct: 243 LRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQ----ITDKSIVAWNA 298

Query: 262 MMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
           M+ G +   +  E+    R M     L P  +T ++++  C       +G  VH  A+++
Sbjct: 299 MIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRN 358

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF  +  +  A + MY  CGK+  A  +F ++ E++++SWN MI++Y +    R A+  +
Sbjct: 359 GFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLF 418

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            ++ +  ++PD  T  S+L   A    +   E IH +V    + +N  VSN+++  Y K 
Sbjct: 419 QDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKC 478

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             + +A +IF  M+ +++I+WNT+I  + ++GF    ++ FSE+      P+  T    L
Sbjct: 479 GNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLL 538

Query: 495 SSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
            SC+    +  G +    + ++ N+   +     ++ L  + G+LD +      M    T
Sbjct: 539 LSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPT 598

Query: 554 IS-WNALISAYAQHGE 568
              W +L++A    G+
Sbjct: 599 ARIWGSLLTASRNKGD 614



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 5/166 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A+ +++G  + A+ LF Q   +  LKPD  ++++ L A A L +     Q+H
Sbjct: 395 LISWNAMIASYTKNGENRKAMTLF-QDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y  +  L +   V+N+I+ +Y    +L+  + +F  +   DV SW T + A    G   
Sbjct: 454 GYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGR 513

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
            + E+F +M ++        + +++  C+  G  + G   F  M +
Sbjct: 514 ISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKR 559


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  361 bits (926), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 206/595 (34%), Positives = 331/595 (55%), Gaps = 13/595 (2%)

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGLL 204
           FD++       +N ++    ++G     IGLF++M    V  D+Y+F+ V  S      +
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G QLH  + KSGF    SV N+L+  Y     V  A KVF+E      D IS+N +++
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSIIN 118

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
           G  S G  E+ L  F  MLV+ +     T VSV + C   R+   G  VH+  +K+ F  
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
                N  + MYS CG +D A  +F  + ++ +VS+ +MI+ YA+  L   A+  + EM+
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             GI PD +T  ++L   A    ++  + +H ++  N +  +I VSNAL+  YAK   ++
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR--PDEYTLSVALSS 496
           +A  +F  M  ++II+WNT+I G+  N +  + L  F+ LL+ E R  PDE T++  L +
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPA 357

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA +S+   G++IHGY+++N   S   + N+++ +YAKCG L  +  +F+ +  KD +SW
Sbjct: 358 CASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSW 417

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
             +I+ Y  HG GKEA++ F  M+  G I+ D+ +F ++L ACSH+GLVD+G R F+ M 
Sbjct: 418 TVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
           ++    P  +H +C++D+L R G L +A R I +  I   +  W AL   C  H +++L 
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 536

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +A  + E E +    YVL++NIYA A  WE+   +R+ + + G+ K PGCSWI
Sbjct: 537 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 591



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 283/591 (47%), Gaps = 51/591 (8%)

Query: 19  ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           E  L  NI +  L++SG +  ++ LF ++ SS  ++ D Y+ S    + ++LR+   G Q
Sbjct: 7   EKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHGGEQ 65

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH + L++G      V N++++ Y   + + S ++VF E+   DV SW            
Sbjct: 66  LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW------------ 113

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              N++I G   NG  + G+ +F +M    +  D  +  SV + 
Sbjct: 114 -------------------NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 154

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C D+ L+  GR +HS+  K+ FS      N L+ MY  CG++  A  VF E        +
Sbjct: 155 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV--V 212

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SY  M+ G A  G   EA+  F +M    + P   T  +V++ C   R+   G +VH   
Sbjct: 213 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 272

Query: 315 MKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            ++  GF+ +  VSNA + MY+ CG + EA ++F+ ++ KDI+SWNT+I  Y++      
Sbjct: 273 KENDLGFDIF--VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 330

Query: 373 AI-LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           A+ L  L ++     PDE T   +L   AS    +    IH ++  NG  ++  V+N+L+
Sbjct: 331 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 390

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK   +  A+ +F +++ +++++W  +I G+ ++GF  + +  F+++  + +  DE 
Sbjct: 391 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 450

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFN 546
           +    L +C+    +  G +    +     I       A ++ + A+ GDL  + R + N
Sbjct: 451 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 510

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           M I  D   W AL+     H + K A    K  + V  ++P+   +  +++
Sbjct: 511 MPIPPDATIWGALLCGCRIHHDVKLAE---KVAEKVFELEPENTGYYVLMA 558


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 233/746 (31%), Positives = 383/746 (51%), Gaps = 53/746 (7%)

Query: 1   MLQRRITATIAGNSNTSKELL---LKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKP 55
           +L RR    +A  S+  +      L  N  +   + +GH++ A+  +V++  H S   +P
Sbjct: 87  VLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSP-RP 145

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++L   + +CA L     G  +H      GL    +V + ++ +Y +A          
Sbjct: 146 DGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADA---------- 195

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                                G +D A EVFD M +RD  ++N M+ G  + G     +G
Sbjct: 196 ---------------------GLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVG 234

Query: 176 LFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           LFR M       +  + A  LSVC  +A LL  G QLH+L  K G    V+V N L++MY
Sbjct: 235 LFRVMRASGCDPNFATLACFLSVCAAEADLLS-GVQLHTLAVKYGLEPEVAVANTLVSMY 293

Query: 234 FNCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
             C  + +A ++F    G +   D +++N M+ G    G V++AL  F DM  + L+P  
Sbjct: 294 AKCQCLEEAWRLF----GLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDS 349

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T  S++ A       + G ++H   +++       + +A + +Y  C  +  A  +F  
Sbjct: 350 VTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDA 409

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
            +  D+V  +TMIS Y    +  +A+  +  + ++GI+P+     S L   AS   + + 
Sbjct: 410 TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIG 469

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +H +V  N       V +AL+  Y+K  R+  ++ +F  MS ++ +TWN++I+ F  N
Sbjct: 470 QELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQN 529

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G P + L  F +++M  ++ +  T+S  LS+CA + ++ +GK+IHG ++K  + + +   
Sbjct: 530 GEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAE 589

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y KCG+L+ +LRVF  M EK+ +SWN++ISAY  HG  KE+V     MQ+ G  
Sbjct: 590 SALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEG-F 648

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           K D  TF A++SAC+HAG V +G R+F  M  +Y   P  +HLSCM+DL  RAG LD+A 
Sbjct: 649 KADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAM 708

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           + I     +  +  W AL  AC  H N+ L  I +  L + +      YVL+SNI A AG
Sbjct: 709 QFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAG 768

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+  + +R L+K   V K PG SW+
Sbjct: 769 RWDGVSKMRRLMKDKKVQKIPGYSWV 794



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 164/346 (47%), Gaps = 17/346 (4%)

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAA-----ITMYSSCGKID 340
           P     ++++  C+ P    +G ++HA+A+ SG         AA     + MY    +  
Sbjct: 34  PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93

Query: 341 EACMIFA---RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSL 395
           +A  +F+   R      + WN +I  +      R A+L Y++M       RPD  T   +
Sbjct: 94  DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           +   A+ G + +  ++H      G+  ++ V +ALI  YA    +  A ++F  M  R+ 
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           + WN +++G++  G     +  F  +  S   P+  TL+  LS CA  + L  G Q+H  
Sbjct: 214 VLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTL 273

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            +K  L  ++++ N ++++YAKC  L+ + R+F +M   D ++WN +IS   Q+G   +A
Sbjct: 274 AVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDA 333

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +  F  MQ  G ++PD  T  ++L A +       G  I   +V +
Sbjct: 334 LRLFCDMQKSG-LQPDSVTLASLLPALTELNGFKQGKEIHGYIVRN 378


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 210/594 (35%), Positives = 324/594 (54%), Gaps = 10/594 (1%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
           VFD+MP+R+   +  +I G  ++        LF  +H      + + F +VL +      
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E GR +H  V K G+     +  ALI  Y   G V  A +VF+E      D +S+  M+
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSK--DMVSWTGMI 119

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A      EAL  F  M VA  +P+  TF  V+ ACL  +    G  VH   +K+ +E
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V    + +Y+ CG  D+A   F  + + D++ W+ MIS +AQ      A+  + +M
Sbjct: 180 RDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQM 239

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   + P++FTF S+L +S  IE +++   IH      G+ T++ VSNAL++ YAK   I
Sbjct: 240 RRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI 299

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           +Q+ ++F  +S RN ++WNT+I  ++  G   + L  FS +L  +++  E T S  L +C
Sbjct: 300 EQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRAC 359

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A +++L  G Q+H    K      +++GNA+I +YAKCG +  +  +F+M+  +D +SWN
Sbjct: 360 ATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWN 419

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I  Y+ HG G EA+  F  M++  + KPD+ TF  VLSACS+ G +D+G + F SM  
Sbjct: 420 AIICGYSMHGLGVEAIKMFNLMKET-KCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQ 478

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           DYG  P  +H +CM+ L+GR+G LD+A + I     +     W AL  AC  H ++ LGR
Sbjct: 479 DYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGR 538

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           I A  +LE E    + +VLLSNIYA A  W   A +R+ +KR GV K+PG SWI
Sbjct: 539 ISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWI 592



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 257/548 (46%), Gaps = 47/548 (8%)

Query: 32  SRSGHYQDALHLFVQIHSS-HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           ++S  + +A  LF ++H   H+L P +++  T L    ++  A  G  +H   L+ G  +
Sbjct: 22  AQSNKFIEAFELFARLHGEGHELNPFVFT--TVLKLLVSMEWAELGRIVHGCVLKVGYGS 79

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              +   ++                      D YS    +S C  M     A EVFD++ 
Sbjct: 80  NTFIGTALI----------------------DAYS----VSGCVSM-----AREVFDEIS 108

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GR 208
            +D+  +  MI    EN      +  F +M     + +N++FA VL  C  GL  F  G+
Sbjct: 109 SKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKAC-LGLQNFDAGK 167

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H  V K+ +   + V   L+ +Y  CG+  DA + F +      D I ++ M+   A 
Sbjct: 168 TVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKN--DVIPWSFMISRFAQ 225

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
            G+ E+AL  F  M  A + P++ TF SV+ A        +   +H  A+K+G      V
Sbjct: 226 SGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFV 285

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA +  Y+ CG I+++  +F  L +++ VSWNT+I +Y Q   G  A+  +  M    +
Sbjct: 286 SNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345

Query: 386 RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +  E T+ S+L +   +  +E+   +H          ++ V NALI  YAK   IK A  
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF 405

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +  R+ ++WN +I G+ ++G  V+ ++ F+ +  ++ +PDE T    LS+C+    
Sbjct: 406 MFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGR 465

Query: 503 LRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALI 560
           L  GKQ    + ++  I   M     M+ L  + G+LD +++ + ++  E   + W AL+
Sbjct: 466 LDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALL 525

Query: 561 SAYAQHGE 568
            A   H +
Sbjct: 526 GACVIHND 533



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/478 (25%), Positives = 212/478 (44%), Gaps = 45/478 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A+ + +  + +AL  F Q+  +   KP+ ++ +  L AC  L+N   G  +H   L+  
Sbjct: 119 IASYAENDCFSEALEFFSQMRVA-GFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN 177

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   +V   +L LY    D     R F ++   DV  W+  +S   + G  + A E+F 
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIF- 236

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
                           C              +M +  V  + ++F+SVL    D   L+ 
Sbjct: 237 ----------------C--------------QMRRAFVIPNQFTFSSVLQASADIESLDL 266

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            + +H    K+G S  V V NAL+  Y  CG +  + ++FE       + +S+N ++   
Sbjct: 267 SKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDR--NDVSWNTIIVSY 324

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
             +G  E AL  F +ML   ++ +E+T+ S++ AC       +G QVH    K+ +    
Sbjct: 325 VQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDV 384

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +V NA I MY+ CG I +A  +F  L  +D VSWN +I  Y+   LG  AI  +  M+  
Sbjct: 385 AVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKET 444

Query: 384 GIRPDEFTF-GSLLASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQ 439
             +PDE TF G L A S    + E    F  +    GI   ++    ++    ++  + Q
Sbjct: 445 KCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQ 504

Query: 440 AYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           A +   ++    +++ W  L+   +++   V+ L   S   + EL P +    V LS+
Sbjct: 505 AVKFIEDIPFEPSVMIWRALLGACVIHN-DVE-LGRISAQRVLELEPRDEASHVLLSN 560



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 138/258 (53%), Gaps = 4/258 (1%)

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSG 400
           M+F  + E++ VS+ T+I  YAQ N    A   +  +   G   + F F +   LL S  
Sbjct: 1   MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           + E+  ++H  V   G  +N  +  ALI AY+ +  +  A ++F  +S +++++W  +I 
Sbjct: 61  WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
            +  N    + L+ FS++ ++  +P+ +T +  L +C  + +   GK +H  VLK N   
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +G  ++ LY +CGD D + R F  M + D I W+ +IS +AQ G+ ++A+  F  M+
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMR 240

Query: 581 DVGRIKPDQATFTAVLSA 598
               I P+Q TF++VL A
Sbjct: 241 RAFVI-PNQFTFSSVLQA 257



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 169/378 (44%), Gaps = 47/378 (12%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +  K  ++  +  ++  ++SG  + AL +F Q+  +  + P+ ++ S+ L A A++ +  
Sbjct: 207 DMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVI-PNQFTFSSVLQASADIESLD 265

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
               +H +AL+AGL     V+N +++ Y                                
Sbjct: 266 LSKTIHGHALKAGLSTDVFVSNALMACY-------------------------------A 294

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G ++ + E+F+ + DR+   +N +I    + G  +  + LF  M +  V+    +++S
Sbjct: 295 KCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSS 354

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L  C     LE G Q+H L  K+ +   V+V NALI MY  CG++ DA  +F+     +
Sbjct: 355 ILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLD--L 412

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----Q 309
            D +S+N ++ G +  G   EA+  F  M     +P ELTFV V+SA  C   G     +
Sbjct: 413 RDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSA--CSNTGRLDEGK 470

Query: 310 VHAQAMKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQ 366
            +  +MK   G E         + +    G +D+A      +  E  ++ W  ++     
Sbjct: 471 QYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVI 530

Query: 367 RN---LGRSAILAYLEMQ 381
            N   LGR +    LE++
Sbjct: 531 HNDVELGRISAQRVLELE 548


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 209/626 (33%), Positives = 330/626 (52%), Gaps = 42/626 (6%)

Query: 120 NPDVYSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           NPD Y  T  L    + G +D   YA ++F++MP+R+L  +N MI             G+
Sbjct: 103 NPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGI 162

Query: 177 FREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           F  M K+ V  DN++FAS L VC A    + G+Q+HS +   GF     V NALI MY  
Sbjct: 163 FDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAK 222

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELT 293
           C +     KVF+E      + +++N ++   A  G   +AL+ F  M  +   ++P + T
Sbjct: 223 CDDEESCLKVFDEMGER--NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFT 280

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F ++++ C   R    G Q+HA  +++       V    + MYS CG+++ A  IF R+ 
Sbjct: 281 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 340

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEM 407
           E++  SWN+MI  Y Q    + A+  + +MQ  GI+PD F+  S+L+S   +   +    
Sbjct: 341 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 400

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLN 465
           +H F+  N +     +   L+  YAK   +  A++++       RN   WN+++ G+   
Sbjct: 401 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANK 460

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   +   HF E+L S++  D  T+                           +++ + L 
Sbjct: 461 GLKKESFNHFLEMLESDIEYDVLTMVT-------------------------IVNLLVLE 495

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            A++ +Y+KCG +  +  VF+ M  K+ +SWNA+IS Y++HG  KEA+  ++ M   G +
Sbjct: 496 TALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKG-M 554

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            P++ TF A+LSACSH GLV++G RIF SM  DY      +H +CM+DLLGRAG L++A+
Sbjct: 555 YPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 614

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             +    I+     W AL  AC  H ++ +GR+ A  L E +   P  YV++SNIYAAAG
Sbjct: 615 EFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAG 674

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E  +IR+++K  GV K PG SWI
Sbjct: 675 RWKEVEDIRQMMKMKGVKKDPGVSWI 700



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 243/525 (46%), Gaps = 67/525 (12%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD ++ ++ L  C  LR+   G Q+H+  +  G K    V N ++ +Y    D  S  +V
Sbjct: 173 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 232

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+   +  +W + +SA  + GH + A  +F +M +             +E+G      
Sbjct: 233 FDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQE-------------SEDG------ 273

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                     ++ D ++F ++L++C +      GRQ+H+ + ++  +  + V   L+ MY
Sbjct: 274 ----------IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMY 323

Query: 234 FNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
             CG +  A ++F    E   Y     S+N M++G    G  +EAL  F+ M +  ++P 
Sbjct: 324 SECGRLNYAKEIFNRMAERNAY-----SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPD 378

Query: 291 ELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             +  S++S+C+     + G ++H   +++  E    +    + MY+ CG +D A  ++ 
Sbjct: 379 CFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYD 438

Query: 348 RLQEKD--IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           +  +KD     WN++++ YA + L + +   +LEM    I  D  T            MV
Sbjct: 439 QTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLT------------MV 486

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            +++  V          +  AL+  Y+K   I +A  +F NM+ +NI++WN +I+G+  +
Sbjct: 487 TIVNLLV----------LETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKH 536

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSL 524
           G   + L  + E+    + P+E T    LS+C+    +  G +I   + ++ N+ +K   
Sbjct: 537 GCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEH 596

Query: 525 GNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
              M+ L  + G L D    V  M IE +  +W AL+ A   H +
Sbjct: 597 YTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD 641



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 176/374 (47%), Gaps = 55/374 (14%)

Query: 35  GHYQDALHLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           GH+ DAL LF+++  S   ++PD ++ +T L  CAN RN   G Q+HA+ +RA +     
Sbjct: 255 GHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 314

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V   ++ +Y     L   K +F+ +   + YSW                           
Sbjct: 315 VETELVHMYSECGRLNYAKEIFNRMAERNAYSW--------------------------- 347

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
               N+MI G  +NG     + LF++M    ++ D +S +S+LS C      + GR+LH+
Sbjct: 348 ----NSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHN 403

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + ++       +   L+ MY  CG++  A KV+++      +   +N ++ G A+ G  
Sbjct: 404 FIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLK 463

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           +E+   F +ML + +    LT V++++  +                      +  A + M
Sbjct: 464 KESFNHFLEMLESDIEYDVLTMVTIVNLLV----------------------LETALVDM 501

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS CG I +A  +F  +  K+IVSWN MIS Y++    + A++ Y EM   G+ P+E TF
Sbjct: 502 YSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTF 561

Query: 393 GSLLASSGFIEMVE 406
            ++L++     +VE
Sbjct: 562 LAILSACSHTGLVE 575



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 6/139 (4%)

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD- 539
           S++ P  Y  S  +  C   +S + GK IH  ++ N       L   ++ LYA+ G LD 
Sbjct: 67  SDVNPLPY--SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDD 124

Query: 540 -CSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            C  R +F  M E++  +WN +I AYA+  +  EA   F  M  +G + PD  TF + L 
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIG-VCPDNFTFASALR 183

Query: 598 ACSHAGLVDDGTRIFDSMV 616
            C      D G ++   ++
Sbjct: 184 VCGALRSRDGGKQVHSKLI 202


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 214/674 (31%), Positives = 346/674 (51%), Gaps = 105/674 (15%)

Query: 94  VANTILSLYKNARDLVSVK-RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
           ++N    L K+ RD   +   +    +NP+++     +SA  K   + YA  VFD+MP R
Sbjct: 14  LSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQR 73

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHS 212
           +L  +N +++                            S++ +     A L E  R  H+
Sbjct: 74  NLYSWNTLLS----------------------------SYSKL-----ACLPEMERVFHA 100

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM-DGLASVGR 271
           + T+   S      N+LI+ Y   G ++ + K             +YN+M+ +G  ++ R
Sbjct: 101 MPTRDMVSW-----NSLISAYAGRGFLLQSVK-------------AYNLMLYNGPFNLNR 142

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
                I    ML+ + +              C  +G QVH   +K GF++Y  V +  + 
Sbjct: 143 -----IALSTMLILASKQG------------CVHLGLQVHGHVVKFGFQSYVFVGSPLVD 185

Query: 332 MYSS-------------------------------CGKIDEACMIFARLQEKDIVSWNTM 360
           MYS                                C +I+++  +F  +QEKD +SW  M
Sbjct: 186 MYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAM 245

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGI 417
           I+ + Q  L R AI  + EM+   +  D++TFGS+L + G +  ++    +HA++     
Sbjct: 246 IAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 305

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             NI V +AL+  Y K + IK A  +F  M+ +N+++W  ++ G+  NG+  + ++ F +
Sbjct: 306 QDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCD 365

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +  + + PD++TL   +SSCA ++SL  G Q H   L + LIS +++ NA++TLY KCG 
Sbjct: 366 MQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGS 425

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ S R+F+ M   D +SW AL+S YAQ G+  E +  F++M   G  KPD+ TF  VLS
Sbjct: 426 IEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHG-FKPDKVTFIGVLS 484

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACS AGLV  G +IF+SM+ ++  IP EDH +CM+DL  RAG L+EA + IN       +
Sbjct: 485 ACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDA 544

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W +L S+C  H N+ +G+  A  LL+ E    + Y+LLS+IYAA G WEE AN+R+ +
Sbjct: 545 IGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM 604

Query: 718 KRTGVIKQPGCSWI 731
           +  G+ K+PGCSWI
Sbjct: 605 RDKGLRKEPGCSWI 618



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 263/548 (47%), Gaps = 41/548 (7%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S+S +   C  L++     ++H + ++A       + N ++S Y     +   +RVF ++
Sbjct: 11  SMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQM 70

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              ++YSW T LS+ +K+  +     VF  MP RD+  +N++I+     G+    +  + 
Sbjct: 71  PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130

Query: 179 EM---HKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
            M      ++ R   S   +L+    G +  G Q+H  V K GF   V V + L+ MY  
Sbjct: 131 LMLYNGPFNLNRIALSTMLILA-SKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSK 189

Query: 236 CGNVVDACKVFEE--AKGYVC---------------------------DHISYNVMMDGL 266
            G V  A + F+E   K  V                            D IS+  M+ G 
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
              G   EA+  FR+M + +L   + TF SV++AC   +  + G QVHA  +++ ++   
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A + MY  C  I  A  +F ++  K++VSW  M+  Y Q      A+  + +MQ+ 
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369

Query: 384 GIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GI PD+FT GS+++S   +  +E     H    ++G+I+ I VSNAL++ Y K   I+ +
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +++F  MS  + ++W  L++G+   G   + L+ F  +L    +PD+ T    LS+C+R 
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489

Query: 501 SSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNA 558
             ++ G QI   ++K + +I        MI L+++ G L+ + +  N M    D I W +
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549

Query: 559 LISAYAQH 566
           L+S+   H
Sbjct: 550 LLSSCRFH 557



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 173/365 (47%), Gaps = 47/365 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +++G  ++A+ LF ++   + L+ D Y+  + L AC  +     G Q+HAY +R  
Sbjct: 246 IAGFTQNGLDREAIDLFREMRLEN-LEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +    V + ++ +Y   + + S + VF ++   +V SWT                    
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWT-------------------- 344

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                      AM+ G  +NGY +  + +F +M    +  D+++  SV+S C +   LE 
Sbjct: 345 -----------AMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEE 393

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q H     SG    ++V NAL+T+Y  CG++ D+ ++F E   YV D +S+  ++ G 
Sbjct: 394 GAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEM-SYV-DEVSWTALVSGY 451

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-QVHAQAMKSGFEAYTSV 325
           A  G+  E L  F  ML    +P ++TF+ V+SA  C R G  Q   Q  +S  + +  +
Sbjct: 452 AQFGKANETLRLFESMLAHGFKPDKVTFIGVLSA--CSRAGLVQKGNQIFESMIKEHRII 509

Query: 326 S-----NAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSAILA 376
                    I ++S  G+++EA     ++    D + W +++S+   +    +G+ A  +
Sbjct: 510 PIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAES 569

Query: 377 YLEMQ 381
            L+++
Sbjct: 570 LLKLE 574



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 79/330 (23%)

Query: 392 FGSLLASSGFIEMVE------MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           F S+  S+ + E+++       IH  +        I + N L+SAYAK +RI  A ++F 
Sbjct: 9   FNSMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFD 68

Query: 446 NMSPRNIITWNT-------------------------------LINGFLLNGFPVQGLQH 474
            M  RN+ +WNT                               LI+ +   GF +Q ++ 
Sbjct: 69  QMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKA 128

Query: 475 FSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
           ++ +L +     +   LS  L   ++   +  G Q+HG+V+K    S + +G+ ++ +Y+
Sbjct: 129 YNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYS 188

Query: 534 KCGDLDCSLRVFNMMI-------------------------------EKDTISWNALISA 562
           K G + C+ + F+ M                                EKD+ISW A+I+ 
Sbjct: 189 KTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG 248

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV-NDYGF 621
           + Q+G  +EA+  F+ M+ +  ++ DQ TF +VL+AC     + +G ++   ++  DY  
Sbjct: 249 FTQNGLDREAIDLFREMR-LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY-- 305

Query: 622 IPAEDHL---SCMLDLLGRAGYLDEAERVI 648
              +D++   S ++D+  +   +  AE V 
Sbjct: 306 ---QDNIFVGSALVDMYCKCKSIKSAETVF 332


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 203/612 (33%), Positives = 330/612 (53%), Gaps = 10/612 (1%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  +S   K G +  A  VF  + D+   +Y+ M+ G   N   D  +  F  M    VR
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              Y+F  +L VC D   L  G+++H  +  +GF+  V  +  ++ MY  C  V +A K+
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--- 302
           F+       D + +N ++ G A  G  + AL     M     RP  +T VS++ A     
Sbjct: 233 FDRMPER--DLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVG 290

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G  +H  +M++GFE++ +VS A + MYS CG +  A +IF R+  K +VSWN+MI 
Sbjct: 291 SLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMID 350

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFT-FGSLLASS--GFIEMVEMIHAFVFINGIIT 419
            Y Q     +A+  + +M    +     T  G+L A +  G +E    +H  +    + +
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGS 410

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ V N+LIS Y+K +R+  A +IF N+  + +++WN +I G+  NG   + + +F ++ 
Sbjct: 411 DVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQ 470

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           +  ++PD +T+   + + A +S L   K IHG V++  L   + +  A++ +YAKCG + 
Sbjct: 471 LQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVH 530

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + ++F+MM E+   +WNA+I  Y  HG GK A+  F+ M+    IKP++ TF  VLSAC
Sbjct: 531 TARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK-EVIKPNEVTFLCVLSAC 589

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH+GLV++G + F SM  DYG  PA DH   M+DLLGRA  L+EA   I    I+     
Sbjct: 590 SHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISV 649

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           + A+  AC  H N+ LG   A  + + + D    +VLL+NIYA A +W++ A +R  +++
Sbjct: 650 FGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEK 709

Query: 720 TGVIKQPGCSWI 731
            G+ K PG S +
Sbjct: 710 KGIQKTPGWSVV 721



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 271/598 (45%), Gaps = 47/598 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   +R+    DA+  F ++     ++P +Y+ +  L  C +  +   G ++H   +  G
Sbjct: 147 LKGYARNSSLDDAVSFFCRMRYD-GVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +                               +V++ T  ++   K   V+ A ++FD
Sbjct: 206 FAS-------------------------------NVFAMTGVVNMYAKCRLVEEAYKMFD 234

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
           +MP+RDL  +N +I+G  +NG+    + L   M +   R D+ +  S+L +V D G L  
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR +H    ++GF   V+V  AL+ MY  CG+V  A  +F+   G     +S+N M+DG 
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTV--VSWNSMIDGY 352

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
              G    A+  F+ M+   +  + +T +  + AC        G  VH    +    +  
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDV 412

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SV N+ I+MYS C ++D A  IF  LQ K +VSWN MI  YAQ      AI  + +MQ  
Sbjct: 413 SVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQ 472

Query: 384 GIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            I+PD FT  S+   LA    +   + IH  V    +  N+ V+ AL+  YAK   +  A
Sbjct: 473 NIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTA 532

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  M  R++ TWN +I+G+  +G     L+ F ++    ++P+E T    LS+C+  
Sbjct: 533 RKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHS 592

Query: 501 SSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNA 558
             +  G Q  G + K+  L   M    AM+ L  +   L+ +      M  +  IS + A
Sbjct: 593 GLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGA 652

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
           ++ A   H   K      KA   +  + PD   +  +L+   + A + D   R+  +M
Sbjct: 653 MLGACRIH---KNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTM 707



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 202/434 (46%), Gaps = 48/434 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +++G  + AL L +++    K +PD  ++ + L A A++ +   G  +H Y++
Sbjct: 245 NTIISGYAQNGFGKTALELVLRMQEEGK-RPDSITIVSILPAVADVGSLRIGRSIHGYSM 303

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           RAG +++ +V+  ++ +Y     + + + +F  +    V SW + +    + G    A E
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F KM D  + + N  + G                                L  C D G 
Sbjct: 364 IFQKMMDEQVEMTNVTVMG-------------------------------ALHACADLGD 392

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +E GR +H L+ +      VSV+N+LI+MY  C  V  A ++FE  +      +S+N M+
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTL--VSWNAMI 450

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA----CLCPRVGYQVHAQAMKSGF 319
            G A  GR+ EA+  F  M + +++P   T VSV+ A     + P+  + +H   +++  
Sbjct: 451 LGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW-IHGLVIRTCL 509

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +    V+ A + MY+ CG +  A  +F  + E+ + +WN MI  Y    LG++A+  + +
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEK 569

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVSNALISAYAK 433
           M+   I+P+E TF  +L++     +VE    F +        G+   +    A++    +
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVE--EGFQYFGSMKKDYGLEPAMDHYGAMVDLLGR 627

Query: 434 NERIKQAYQIFHNM 447
             R+ +A+     M
Sbjct: 628 ANRLNEAWDFIQKM 641



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 209/431 (48%), Gaps = 13/431 (3%)

Query: 297 VMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           ++  C   +  +Q     +K+G  +        ++++   G + EA  +F  +++K    
Sbjct: 83  LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDEL 142

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVF 413
           ++TM+  YA+ +    A+  +  M+  G+RP  + F  LL   G    +   + IH  + 
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +NG  +N+     +++ YAK   +++AY++F  M  R+++ WNT+I+G+  NGF    L+
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALE 262

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
               +     RPD  T+   L + A + SLR G+ IHGY ++    S +++  A++ +Y+
Sbjct: 263 LVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYS 322

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG +  +  +F+ M  K  +SWN++I  Y Q+G+   A+  F+ M D  +++    T  
Sbjct: 323 KCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMD-EQVEMTNVTVM 381

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI-NSQH 652
             L AC+  G V+ G R    +++          ++ ++ +  +   +D A  +  N QH
Sbjct: 382 GALHACADLGDVEQG-RFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD-KPSVYVLLSNIYAAAGL--WEE 709
               S  W A+    A +G  R+   I      + Q+ KP  + ++S I A A L    +
Sbjct: 441 KTLVS--WNAMILGYAQNG--RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQ 496

Query: 710 AANIRELLKRT 720
           A  I  L+ RT
Sbjct: 497 AKWIHGLVIRT 507


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 224/709 (31%), Positives = 370/709 (52%), Gaps = 47/709 (6%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y+++L +F+    + K  P+ Y LS+ + AC+ L  +    +   + L++ L      
Sbjct: 124 GFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSG---RWMVFQLQSFL------ 174

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
                           VK  F    + DVY  T  +    K G++DYA  VFD +P++  
Sbjct: 175 ----------------VKSRF----DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKST 214

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
             +  MI+GC + G   + + LF ++ + +V  D Y  ++VLS C     LE G+Q+H+ 
Sbjct: 215 VTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           + + G     S++N LI  Y  CG V  A K+F+       + IS+  ++ G       +
Sbjct: 275 ILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNK--NIISWTTLLSGYKQNSLHK 332

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           EA+  F  M    L+P      S++++C        G QVHA  +K+     + V+N+ I
Sbjct: 333 EAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLI 392

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG-----RSAILAYLEMQSVGI 385
            MY+ C  + EA  +F      D+V +N MI  Y++  LG       A+  + +M+   I
Sbjct: 393 DMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSR--LGTQWELHDALNIFHDMRFRLI 450

Query: 386 RPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RP   TF SLL +S  +    + + IH  +F  G+  +I   +ALI+ Y+    +K +  
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRL 510

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  ++++ WN++ +G++      + L  F EL +S  RPDE+T    +++   ++S
Sbjct: 511 VFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLAS 570

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L+ G++ H  +LK  L     + NA++ +YAKCG  + + + F+    +D + WN++IS+
Sbjct: 571 LQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA HGEG++A+   + M   G I+P+  TF  VLSACSHAGLV+DG + F+ M+  +G  
Sbjct: 631 YANHGEGRKALQMLEKMMCEG-IEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIE 688

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H  CM+ LLGRAG L+EA  +I     +  +  W +L S CA  GN+ L    A +
Sbjct: 689 PETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEM 748

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +  +      + LLSNIYA+ G+W +A  +RE +K  GV+K+PG SWI
Sbjct: 749 AILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWI 797



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 170/618 (27%), Positives = 303/618 (49%), Gaps = 25/618 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D Y     ++  ++ G + YA +VF+KMP+R+L  ++ M++ C  +G+ +  + +F +  
Sbjct: 78  DTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFW 137

Query: 182 KLDVRRDN-YSFASVLSVCDAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYFNC 236
           +      N Y  +S +  C +GL   GR    QL S + KS F   V V   LI  Y   
Sbjct: 138 RTRKNSPNEYILSSFIQAC-SGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKE 196

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           GN+  A  VF+         +++  M+ G   +GR   +L  F  ++  ++ P      +
Sbjct: 197 GNIDYARLVFDALPEK--STVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILST 254

Query: 297 VMSAC-LCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+SAC + P +  G Q+HA  ++ G E   S+ N  I  Y  CG++  A  +F  +  K+
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKN 314

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           I+SW T++S Y Q +L + A+  +  M   G++PD F   S+L S   +  +E    +HA
Sbjct: 315 IISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHA 374

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +     +  +  V+N+LI  YAK + + +A ++F   +  +++ +N +I G+   G   +
Sbjct: 375 YTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWE 434

Query: 471 ---GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               L  F ++    +RP   T    L + A ++SL   KQIHG + K  L   +  G+A
Sbjct: 435 LHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSA 494

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+ C  L  S  VF+ M  KD + WN++ S Y Q  E +EA++ F  +Q + R +P
Sbjct: 495 LIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQ-LSRDRP 553

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+ TF  +++A  +   +  G   F   +   G        + +LD+  + G  ++A + 
Sbjct: 554 DEFTFVDMVTAAGNLASLQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKA 612

Query: 648 INSQHIQARSDN--WWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAA 704
            +S    A  D   W ++ S+ A HG  R   +++  ++ E  +     +V + +  + A
Sbjct: 613 FDS---AASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHA 669

Query: 705 GLWEEAANIRELLKRTGV 722
           GL E+     EL+ R G+
Sbjct: 670 GLVEDGLKQFELMLRFGI 687



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 215/428 (50%), Gaps = 22/428 (5%)

Query: 187 RDNYSFASVLSV--CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           R    FA +L +   D  LL +   +H  +  SG      + N L+ +Y   G +V A K
Sbjct: 42  RGRREFARLLQLRALDDPLL-YHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARK 100

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLC 303
           VFE+      + ++++ M+      G  EE+L+ F D        P+E    S + AC  
Sbjct: 101 VFEKMPER--NLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSG 158

Query: 304 -----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                  + +Q+ +  +KS F+    V    I  Y   G ID A ++F  L EK  V+W 
Sbjct: 159 LDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWT 218

Query: 359 TMISTYAQRNLGRS--AILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVF 413
           TMIS   +  +GRS  ++  + ++    + PD +   ++L++     F+E  + IHA + 
Sbjct: 219 TMISGCVK--MGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G   +  + N LI +Y K  R++ A+++F  M  +NII+W TL++G+  N    + ++
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F+ +    L+PD +  S  L+SCA + +L  G Q+H Y +K NL +   + N++I +YA
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG---EGKEAVSCFKAMQDVGRIKPDQA 590
           KC  L  + +VF++    D + +NA+I  Y++ G   E  +A++ F  M+    I+P   
Sbjct: 397 KCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMR-FRLIRPSLL 455

Query: 591 TFTAVLSA 598
           TF ++L A
Sbjct: 456 TFVSLLRA 463



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 210/445 (47%), Gaps = 52/445 (11%)

Query: 34  SGHYQDALH-----LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           SG+ Q++LH     LF  +     LKPD+++ S+ L +CA+L    FG Q+HAY ++A L
Sbjct: 323 SGYKQNSLHKEAMELFTSM-PKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANL 381

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
               +V N+++ +Y     L   ++                               VFD 
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTEARK-------------------------------VFDI 410

Query: 149 MPDRDLPVYNAMITGCTENGYE---DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
               D+ ++NAMI G +  G +      + +F +M    +R    +F S+L    A L  
Sbjct: 411 FAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA-SASLTS 469

Query: 206 FG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            G  +Q+H L+ K G +  +   +ALI +Y NC  + D+  VF+E K  V D + +N M 
Sbjct: 470 LGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMK--VKDLVIWNSMF 527

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G       EEAL  F ++ ++  RP E TFV +++A       ++G + H Q +K G E
Sbjct: 528 SGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLE 587

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               ++NA + MY+ CG  ++A   F     +D+V WN++IS+YA    GR A+    +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKM 647

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              GI P+  TF  +L++   +G +E        +   GI    +    ++S   +  R+
Sbjct: 648 MCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRL 707

Query: 438 KQAYQIFHNMSPRN-IITWNTLING 461
            +A ++   M  +   I W +L++G
Sbjct: 708 NEARELIEKMPTKPAAIVWRSLLSG 732



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 163/308 (52%), Gaps = 7/308 (2%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH Q + SG E  T +SN  + +YS  G +  A  +F ++ E+++V+W+TM+S       
Sbjct: 66  VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125

Query: 370 GRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIE-----MVEMIHAFVFINGIITNIQV 423
              +++ +L+  ++    P+E+   S + +   ++     MV  + +F+  +    ++ V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
              LI  Y K   I  A  +F  +  ++ +TW T+I+G +  G     LQ F +L+   +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD Y LS  LS+C+ +  L  GKQIH ++L+       SL N +I  Y KCG +  + +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           +F+ M  K+ ISW  L+S Y Q+   KEA+  F +M   G +KPD    +++L++C+   
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFG-LKPDMFACSSILTSCASLH 364

Query: 604 LVDDGTRI 611
            ++ GT++
Sbjct: 365 ALEFGTQV 372



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 127/248 (51%), Gaps = 9/248 (3%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           ++H  + ++G+  +  +SN L++ Y++   +  A ++F  M  RN++TW+T+++    +G
Sbjct: 65  VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHG 124

Query: 467 FPVQGLQHFSELLMSELR-PDEYTLSVALSSCARISSLRHGK----QIHGYVLKNNLISK 521
           F  + L  F +   +    P+EY LS  + +C+ +     G+    Q+  +++K+     
Sbjct: 125 FYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDG--SGRWMVFQLQSFLVKSRFDRD 182

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + +G  +I  Y K G++D +  VF+ + EK T++W  +IS   + G    ++  F  + +
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME 242

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
            G + PD    + VLSACS    ++ G +I   ++  YG       ++ ++D   + G +
Sbjct: 243 -GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGHEKDASLMNVLIDSYVKCGRV 300

Query: 642 DEAERVIN 649
             A ++ +
Sbjct: 301 RAAHKLFD 308


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 320/587 (54%), Gaps = 9/587 (1%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           MP +++  + ++++G T NG  +  + +F +M +  V  ++++  + L  C D G L  G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            Q+HSL  ++GF+    + + LI MY  CG++  A +VF+       D + Y  ++    
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSP--DVVGYTSLISAFC 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-GYQVHAQAMKS-GFEAYTSV 325
             G  E A      ML   L+P+E T  ++++AC  PRV G Q+H   +K  G  + +  
Sbjct: 119 RNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC--PRVLGQQIHGYLIKKIGLRSQSVY 176

Query: 326 SNAA-ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           S+ A I  YS  G+   A  +F  L  K++VSW +M+  Y +      A+  + +M S G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           + P+EF    +L + G I +   +H     + +IT+I+VSNAL+S Y +   +++   + 
Sbjct: 237 VDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 296

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + +   ++++W T I+    NGF  + +    ++      P+ Y  S  LSSCA ++SL 
Sbjct: 297 NKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLD 356

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G Q H   LK    S++  GNA+I +Y+KCG +  +   F++M   D  SWN+LI  +A
Sbjct: 357 QGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHA 416

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHG+  +A+  F  M+  G IKPD +TF  VL  C+H+G+V++G   F  M++ Y F PA
Sbjct: 417 QHGDANKALEVFSKMRSNG-IKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPA 475

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H +CM+D+LGR G  DEA R+IN    +  +  W  L ++C  H NL +G++ A  L+
Sbjct: 476 PSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLM 535

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E      + YVL+SNIYA  G WE+A  +R  +  TGV K  GCSWI
Sbjct: 536 ELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWI 582



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 250/546 (45%), Gaps = 44/546 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +R+G  + AL +F  +  S  + P+ ++ +  L ACA+L     G Q+H+ A+RAG
Sbjct: 13  MSGYTRNGRPEAALAMFADMVES-GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG 71

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + + ++ +Y     L + K VF  + +PDV  +T+ +SA  + G  + A E   
Sbjct: 72  FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE--- 128

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                      A+I                 +M K  ++ + ++  ++L+ C   L   G
Sbjct: 129 -----------ALI-----------------QMLKQGLKPNEHTMTTILTACPRVL---G 157

Query: 208 RQLHS-LVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +Q+H  L+ K G  S  V    ALI  Y   G    A  VF+    +  + +S+  MM  
Sbjct: 158 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSL--HCKNVVSWCSMMQL 215

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
               GR+EEAL  F DM+   + P+E     V+ AC    +G Q+H  A+K        V
Sbjct: 216 YIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRV 275

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA ++MY   G ++E   +  +++  D+VSW T IS   Q   G  AI    +M S G 
Sbjct: 276 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 335

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P+ + F S+L+S   +  ++     H      G  + I   NALI+ Y+K  ++  A  
Sbjct: 336 TPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 395

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F  M   ++ +WN+LI+G   +G   + L+ FS++  + ++PD+ T    L  C     
Sbjct: 396 AFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGM 455

Query: 503 LRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALI 560
           +  G+     ++   +     S    MI +  + G  D +LR+ N M  E D + W  L+
Sbjct: 456 VEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 515

Query: 561 SAYAQH 566
           ++   H
Sbjct: 516 ASCKLH 521


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 217/633 (34%), Positives = 338/633 (53%), Gaps = 59/633 (9%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +NA+I    + G  D  +G + +M +L    D+Y+F  VL  C +   L  G  +H++V 
Sbjct: 95  WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA-KGYVCDHISYNVMMDGLASVGRVEE 274
            +G    V + N+++ MY  CG + DA ++F+E  +  + D +S+N ++      G+   
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214

Query: 275 AL-IRFR--DMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
           AL I FR  +     LRP  +T V+++ AC      + G QVH  ++++G      V NA
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNA 274

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTM---------------------------- 360
            ++MY+ C K++EA  +F  +++KD+VSWN M                            
Sbjct: 275 LVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLD 334

Query: 361 -------ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
                  I+ YAQ+  G  A+  + +MQ  G+ P+  T  SLL   AS G +   +  HA
Sbjct: 335 VITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHA 394

Query: 411 FVFINGIITN-------IQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLING 461
           +V  N +  N       + V N LI  YAK +  + A  IF ++    +N++TW  +I G
Sbjct: 395 YVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGG 454

Query: 462 FLLNGFPVQGLQHFSELLM--SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NL 518
           +  +G     L+ F+++    + L+P+ +TLS AL +CAR+  LR G+Q+H Y L+N N 
Sbjct: 455 YAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
              + +GN +I +Y+K GD+D +  VF+ M  ++ +SW +L++ Y  HG G+EA+  F  
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           MQ +G    D  TF  VL ACSH+G+VD G   F  MV  +G  P  +H +CM+DLLGRA
Sbjct: 575 MQKLG-FAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRA 633

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G L+EA  +I +  ++  +  W AL SA   H N+ LG   A  L E   +    Y LLS
Sbjct: 634 GRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLS 693

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+YA A  W++ A IR L+K TG+ K+PGCSWI
Sbjct: 694 NLYANARRWKDVARIRSLMKHTGIRKRPGCSWI 726



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 225/471 (47%), Gaps = 33/471 (7%)

Query: 19  ELLLKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           E ++  N  LA   + G  + AL +  ++  H S KL+PD  +L   L ACA++     G
Sbjct: 194 EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHG 253

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+H +++R GL     V N ++S+Y     +    +VF  I+  DV SW   ++  +++
Sbjct: 254 KQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313

Query: 137 GHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           G  D A  +F  M + D+ +    ++A+I G  + G+    + +FR+M    +  +  + 
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373

Query: 193 ASVLSVC-DAGLLEFGRQLHSLVTKSGFSC-------LVSVVNALITMYFNCGNVVDACK 244
           AS+LS C   G L +G+Q H+ V K+  +         + V+N LI MY  C +   A  
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL 302
           +F+  +G   + +++ VM+ G A  G   +AL  F  +     SL+P+  T    + AC 
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493

Query: 303 C---PRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                R+G Q+HA A+++  E+    V N  I MYS  G ID A  +F  ++ +++VSW 
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWT 553

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF--------GSLLASSGFIEMVEMIHA 410
           ++++ Y     G  A+  + +MQ +G   D  TF         S +   G I   +M+  
Sbjct: 554 SLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKG 613

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
           F    GI    +    ++    +  R+ +A ++  NMS     + W  L++
Sbjct: 614 F----GITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 188/368 (51%), Gaps = 24/368 (6%)

Query: 289 PSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           P  +  +S++  C         H Q    GF   T + + A+  Y  CG   EA  +  R
Sbjct: 28  PPTIPLISLLRQCKTLINAKLAHQQIFVHGF---TEMFSYAVGAYIECGASAEAVSLLQR 84

Query: 349 L--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           L      +  WN +I    +  L    +  Y +MQ +G  PD +TF  +L + G I  + 
Sbjct: 85  LIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLR 144

Query: 407 M---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR---NIITWNTLIN 460
               +HA V  NG+ +N+ + N++++ Y +   +  A+Q+F  +  R   +I++WN+++ 
Sbjct: 145 HGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILA 204

Query: 461 GFLLNGFPVQGLQ-------HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
            ++  G     L+       H+S     +LRPD  TL   L +CA + +L+HGKQ+HG+ 
Sbjct: 205 AYVQGGQSRTALRIAFRMGNHYS----LKLRPDAITLVNILPACASVFALQHGKQVHGFS 260

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           ++N L+  + +GNA++++YAKC  ++ + +VF  + +KD +SWNA+++ Y+Q G    A+
Sbjct: 261 VRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSAL 320

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           S FK MQ+   IK D  T++AV++  +  G   +   +F  M   YG  P    L+ +L 
Sbjct: 321 SLFKMMQE-EDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLS 378

Query: 634 LLGRAGYL 641
                G L
Sbjct: 379 GCASVGAL 386



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 147/591 (24%), Positives = 243/591 (41%), Gaps = 90/591 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G   D L  + Q+     L PD Y+    L AC  + +   G  +HA     GL +   +
Sbjct: 106 GLLDDTLGFYCQMQRLGWL-PDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFI 164

Query: 95  ANTILSLYKNARDLVSVKRVFSEI---QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            N+I+++Y     L    ++F E+   +  D+ SW + L+A  + G    A  +  +M +
Sbjct: 165 CNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGN 224

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQL 210
                                        + L +R D  +  ++L  C +   L+ G+Q+
Sbjct: 225 H----------------------------YSLKLRPDAITLVNILPACASVFALQHGKQV 256

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    ++G    V V NAL++MY  C  + +A KVFE  K    D +S+N M+ G + +G
Sbjct: 257 HGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK--DVVSWNAMVTGYSQIG 314

Query: 271 RVE-----------------------------------EALIRFRDMLVASLRPSELTFV 295
             +                                   EAL  FR M +  L P+ +T  
Sbjct: 315 SFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLA 374

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGF-------EAYTSVSNAAITMYSSCGKIDEACMI 345
           S++S C        G Q HA  +K+         E    V N  I MY+ C     A  I
Sbjct: 375 SLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSI 434

Query: 346 FARLQEKD--IVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLL---AS 398
           F  ++ KD  +V+W  MI  YAQ      A+  + ++  Q   ++P+ FT    L   A 
Sbjct: 435 FDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACAR 494

Query: 399 SGFIEMVEMIHAFVFINGIITNI-QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            G + +   +HA+   N   + +  V N LI  Y+K+  I  A  +F NM  RN+++W +
Sbjct: 495 LGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTS 554

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK-QIHGYVLKN 516
           L+ G+ ++G   + L  F ++       D  T  V L +C+    +  G    H  V   
Sbjct: 555 LMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGF 614

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
            +         M+ L  + G L+ ++ +  NM +E   + W AL+SA   H
Sbjct: 615 GITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIH 665



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 67/298 (22%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTT 63
           R+  +I  +     + ++   + +   ++ G   DAL LF QI      LKP+ ++LS  
Sbjct: 429 RVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCA 488

Query: 64  LAACANLRNAAFGNQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
           L ACA L     G QLHAYALR        +V N ++ +Y  + D+ + + VF  ++  +
Sbjct: 489 LMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRN 548

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           V SWT+                               ++TG   +G  +  + LF +M K
Sbjct: 549 VVSWTS-------------------------------LMTGYGMHGRGEEALHLFDQMQK 577

Query: 183 LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           L    D  +F  VL  C           HS +   G             +YF+  ++V  
Sbjct: 578 LGFAVDGITFLVVLYACS----------HSGMVDQGM------------IYFH--DMVKG 613

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
             +   A+ Y C       M+D L   GR+ EA+   ++M   S+ P+ + +V+++SA
Sbjct: 614 FGITPGAEHYAC-------MVDLLGRAGRLNEAMELIKNM---SMEPTAVVWVALLSA 661


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 216/722 (29%), Positives = 360/722 (49%), Gaps = 45/722 (6%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  +A LS+S    +A+  F  +     ++P   SL         L N     
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICKLSNIELCR 250

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y  R    +   V+N ++ LY                               +K G
Sbjct: 251 SIHGYVFRRDFSSA--VSNGLIDLY-------------------------------SKCG 277

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-L 196
            VD A  VFD+M D+D   +  M+ G   NG     + LF +M   +VR +  S  S  L
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           +  +   LE G+++H    +      + V   L+ MY  CG    A ++F   +G   D 
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR--DL 395

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           ++++ ++  L   G  EEAL  F++M    ++P+ +T +S++ AC      ++G  +H  
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K+  ++  S   A ++MY+ CG    A   F R+  +DIV+WN++I+ YAQ     +A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           I  + +++   I PD  T   ++ +   +  ++    IH  +   G  ++  V NALI  
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDM 575

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
           YAK   +  A  +F+     ++ +TWN +I  ++ NG   + +  F ++ +    P+  T
Sbjct: 576 YAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               L + A +++ R G   H  +++   +S   +GN++I +YAKCG LD S ++FN M 
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMD 695

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            KDT+SWNA++S YA HG G  A++ F  MQ+  +++ D  +F +VLSAC HAGLV++G 
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-SQVQIDSVSFVSVLSACRHAGLVEEGR 754

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           +IF SM + Y   P  +H +CM+DLLGRAG  DE    I    ++  +  W AL  +C  
Sbjct: 755 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRM 814

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H N++LG +    L++ E   P+ +V+LS+IYA +G W +A   R  +   G+ K PGCS
Sbjct: 815 HSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874

Query: 730 WI 731
           W+
Sbjct: 875 WV 876



 Score =  285 bits (730), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 205/691 (29%), Positives = 337/691 (48%), Gaps = 48/691 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RS  Y +AL ++  +     L+PD Y+ +  L AC    N   G   H    R GL+  
Sbjct: 105 TRSKQYNEALEMYYCM-VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE-- 161

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                         RD      VF      D+YS         KMG +  A EVFDKMP 
Sbjct: 162 --------------RD------VFIGAGLVDMYS---------KMGDLKRAREVFDKMPK 192

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQL 210
           RD+  +NAMI G +++      +  FR M  + V   + S  ++   +C    +E  R +
Sbjct: 193 RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSI 252

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V +  FS  VS  N LI +Y  CG+V  A +VF++      D +S+  MM G A  G
Sbjct: 253 HGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQ--DDVSWGTMMAGYAHNG 308

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              E L  F  M + ++R ++++ VS   A    +    G ++H  A++   ++   V+ 
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + MY+ CG+ ++A  +F  LQ +D+V+W+ +I+   Q      A+  + EMQ+  ++P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  T  S+L +   + ++++   IH F     + +++    AL+S YAK      A   F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + MS R+I+TWN+LING+   G P   +  F +L +S + PD  T+   + +CA ++ L 
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAY 563
            G  IHG ++K    S   + NA+I +YAKCG L  +  +FN     KD ++WN +I+AY
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q+G  KEA+S F  M+ +    P+  TF +VL A ++     +G   F + +   GF+ 
Sbjct: 609 MQNGHAKEAISSFHQMR-LENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLS 666

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
                + ++D+  + G LD +E++ N       + +W A+ S  A HG+      +  L+
Sbjct: 667 NTLVGNSLIDMYAKCGQLDYSEKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725

Query: 684 LEREQDKPSV-YVLLSNIYAAAGLWEEAANI 713
            E +    SV +V + +    AGL EE   I
Sbjct: 726 QESQVQIDSVSFVSVLSACRHAGLVEEGRKI 756



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 179/685 (26%), Positives = 325/685 (47%), Gaps = 34/685 (4%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H+L+    S++T  +   +L ++ + N LH          YP     +LS  K+   L+ 
Sbjct: 5   HQLRRSFTSIATAASEFPSLSSSTYTNYLH----------YPR----LLSSCKHLNPLLQ 50

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           +            +S T  ++  +     D A  VFD  P+    ++N+MI   T +   
Sbjct: 51  IHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQY 110

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  + ++  M +  +  D Y+F  VL  C   L L+ G   H  + + G    V +   L
Sbjct: 111 NEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGL 170

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + MY   G++  A +VF++      D +++N M+ GL+      EA+  FR M +  + P
Sbjct: 171 VDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 290 SELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           S ++ +++    +C      +   +H    +  F   ++VSN  I +YS CG +D A  +
Sbjct: 229 SSVSLLNLFPG-ICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRV 285

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT-FGSLLASSGFIEM 404
           F ++ ++D VSW TM++ YA        +  + +M+   +R ++ +   + LA++  I++
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 405 V--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
              + IH       I ++I V+  L+  YAK    ++A Q+F  +  R+++ W+ +I   
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           +  G+P + L  F E+   +++P+  TL   L +CA +S L+ GK IH + +K ++ S +
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           S G A++++YAKCG    +L  FN M  +D ++WN+LI+ YAQ G+   A+  F  ++ +
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR-L 524

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             I PD  T   V+ AC+    +D GT I   +V   GF       + ++D+  + G L 
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLP 583

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
            AE + N          W  + +A   +G+ +   I +   +  E   P+    +S + A
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA-ISSFHQMRLENFHPNSVTFVSVLPA 642

Query: 703 AAGLWEEAANIRELLKRTGVIKQPG 727
           AA L    A  RE +     I Q G
Sbjct: 643 AAYL----AAFREGMAFHACIIQMG 663


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 220/686 (32%), Positives = 362/686 (52%), Gaps = 55/686 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++L   L AC        G Q+H + + +G  ++  V+N+++++Y             
Sbjct: 74  DEFTLVLALKACCGF--PKLGRQIHGFVISSGFVSHITVSNSLMNMY------------- 118

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              K G ++ A  VF  + D D+  +N +++G  ++   +  + 
Sbjct: 119 ------------------CKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENALS 157

Query: 176 LFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
               M+   V+ D+ ++ + LS C D     FG QLH+L  K GF   V V NAL+TMY 
Sbjct: 158 FALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYS 217

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSELT 293
              ++VDA KVF+E      D +S++ M+ G A  G    +A++ F  M+   ++   + 
Sbjct: 218 RWEHLVDARKVFDEMPSR--DRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDNVP 275

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
               +S C   R   +G Q+H  A+K+G E +TSV N  I+ YS C  I++A  +F  + 
Sbjct: 276 ITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFELIN 335

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---M 407
           +++++SW TMIS Y +      A+  + +M+  G+ P++ TF  LL +     MVE   M
Sbjct: 336 DRNVISWTTMISLYEE-----GAVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQGLM 390

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H        ++ + V N+LI+ YAK E ++ A ++F  +  R II+WN LI+G+  N  
Sbjct: 391 VHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQNAL 450

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALS--SCARISSLRHGKQIHGYVLKNNLISKMSLG 525
             + L+ F   +M E +P+EYT    L+  S     SL+HG++ H +++K  L     + 
Sbjct: 451 CQEALEAFLYAIM-EYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIIS 509

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            A++ +YAK G +  S RVFN   ++   +W ALIS YAQHG+ +  +  F+ M+   RI
Sbjct: 510 GALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEK-ERI 568

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KPD   F +VL+ACS   +VD G + F+ M+ D+   P  +H SCM+D+LGRAG L+EAE
Sbjct: 569 KPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAGRLEEAE 628

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            ++             +L  AC  HGN+ +   IA  L+++E  +   YVL+SN+YA  G
Sbjct: 629 EILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSNLYAQKG 688

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            WE+ A +R+ ++  GV+K+ G SW+
Sbjct: 689 DWEKVAKVRKEMRERGVMKEIGFSWV 714



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 286/582 (49%), Gaps = 49/582 (8%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK--LDVRRDNYSFASVLSVCDAG 202
           +FD+ P  +   +N ++            +  F+   +  LD   D ++    L  C  G
Sbjct: 29  LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKAC-CG 87

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             + GRQ+H  V  SGF   ++V N+L+ MY   G +  A  VF+    +  D +S+N +
Sbjct: 88  FPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNL--HDPDIVSWNTI 145

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G     + E AL     M +  ++   +T+ + +S CL       G+Q+H  A+K GF
Sbjct: 146 LSGFE---KSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYL 378
           +    V NA +TMYS    + +A  +F  +  +D VSW+ MI+ YAQ  + G  AIL ++
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262

Query: 379 EMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +M   G++ D       L+  G    +E+ + IH      G  T+  V N LIS Y+K E
Sbjct: 263 QMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCE 322

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+ A  +F  ++ RN+I+W T+I+ +      +     F+++ +  + P++ T    L 
Sbjct: 323 IIEDAKAVFELINDRNVISWTTMISLYEEGAVSL-----FNKMRLDGVYPNDVTFIGLLH 377

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +    + +  G  +HG  +K + +S++++GN++IT+YAK   +  + RVF  +  ++ IS
Sbjct: 378 AITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIIS 437

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS-------------HA 602
           WNALIS YAQ+   +EA+  F  +  +   KP++ TF +VL+A S             H+
Sbjct: 438 WNALISGYAQNALCQEALEAF--LYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHS 495

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
            L+  G  + D +++             +LD+  + G + E++RV N    Q++   W A
Sbjct: 496 HLIKVGLNV-DPIIS-----------GALLDMYAKRGSIQESQRVFNETSKQSQF-AWTA 542

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           L S  A HG+     I     +E+E+ KP   + LS + A +
Sbjct: 543 LISGYAQHGDYE-SVIKLFEEMEKERIKPDAVIFLSVLTACS 583



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/582 (26%), Positives = 268/582 (46%), Gaps = 89/582 (15%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +K D  + +T L+ C +     FG QLH  AL+ G K    V N ++++Y     LV  +
Sbjct: 167 VKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDAR 226

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +VF E+ + D  SW+                               AMITG  + G   +
Sbjct: 227 KVFDEMPSRDRVSWS-------------------------------AMITGYAQEGDNGL 255

Query: 173 -GIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALI 230
             I +F +M +  V+ DN      LSVC     LE G+Q+H L  K+G     SV N LI
Sbjct: 256 QAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLI 315

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           + Y  C  + DA  VFE     + D   IS+  M+         E A+  F  M +  + 
Sbjct: 316 STYSKCEIIEDAKAVFE----LINDRNVISWTTMISLYE-----EGAVSLFNKMRLDGVY 366

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+++TF+ ++ A     +   G  VH   +K+ F +  +V N+ ITMY+    + +A  +
Sbjct: 367 PNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRV 426

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F  L  ++I+SWN +IS YAQ  L + A+ A+L    +  +P+E+TFGS+L +    E +
Sbjct: 427 FIELPYREIISWNALISGYAQNALCQEALEAFL-YAIMEYKPNEYTFGSVLNAISAGEDI 485

Query: 406 EM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +      H+ +   G+  +  +S AL+  YAK   I+++ ++F+  S ++   W  LI+
Sbjct: 486 SLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALIS 545

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  +G     ++ F E+    ++PD       L++C+R   +  G+Q    ++K+++I 
Sbjct: 546 GYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIE 605

Query: 521 KMS---------LG---------------------NAMITLYAKC---GDLDCSLRVFNM 547
                       LG                     +A+ +L   C   G+++ + R+ N 
Sbjct: 606 PEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIAND 665

Query: 548 MIEKDTISWNALI---SAYAQHGEGKEAVSCFKAMQDVGRIK 586
           +++K+ +     +   + YAQ G+ ++     K M++ G +K
Sbjct: 666 LMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMK 707



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 13/204 (6%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVA 95
           Q+AL  F  +++  + KP+ Y+  + L A +   + +   G + H++ ++ GL   P ++
Sbjct: 452 QEALEAF--LYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVDPIIS 509

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR--- 152
             +L +Y     +   +RVF+E      ++WT  +S   + G  +   ++F++M      
Sbjct: 510 GALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEEMEKERIK 569

Query: 153 -DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLSVCDAGLLEFGR 208
            D  ++ +++T C+ N   D+G   F  M   H ++   ++YS   V  +  AG LE   
Sbjct: 570 PDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYS-CMVDMLGRAGRLEEAE 628

Query: 209 Q-LHSLVTKSGFSCLVSVVNALIT 231
           + L  +    G S L S++ A  T
Sbjct: 629 EILARIPGGPGVSALQSLLGACRT 652


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 217/624 (34%), Positives = 340/624 (54%), Gaps = 19/624 (3%)

Query: 122 DVYSW------TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           D ++W         LS   + G   +A  VF KMP+RD+  +N M+ G  ++G  D  + 
Sbjct: 116 DRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALD 175

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMY 233
           L+  M    VR D Y+F  VL  C  G+ ++  GR++H+ V + GF   V V+NAL+TMY
Sbjct: 176 LYHRMMWAGVRPDVYTFPCVLRSC-GGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMY 234

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             CG+V+ A KVF+     V D IS+N M+ G    G     L  F  ML   ++P+ +T
Sbjct: 235 AKCGDVMAARKVFDSMT--VMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMT 292

Query: 294 FVSVMSAC-LCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             SV  A  L   V +  ++H  A+K GF    +  N+ I MY+S G + +A  +F+R+ 
Sbjct: 293 ITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMD 352

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
            +D ++W  MIS Y +      A+  Y  M+   + PD+ T  S LA+    G +++   
Sbjct: 353 TRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVK 412

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H      G I+ I V+NA++  YAK++RI +A ++F  M  +++++W+++I GF  N  
Sbjct: 413 LHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHR 472

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L +F  +L ++++P+  T   AL++CA   +LR GK+IH +VL+  +  +  L NA
Sbjct: 473 NFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA 531

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I LY KCG    +   F     KD +SWN +I+ +  HG G  A+S F  M  +G   P
Sbjct: 532 LIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGEC-P 590

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+ TF A+L ACS  G+V +G  +F SM   Y  +P   H +CM+DLL RAG L EA   
Sbjct: 591 DEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNF 650

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           IN   I   +  W AL + C  H ++ LG + A  +L  E +    +VLL ++YA A LW
Sbjct: 651 INEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLW 710

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++ A +R+ ++  G+    GCSW+
Sbjct: 711 DKLARVRKTMREKGLDHDSGCSWV 734



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 151/559 (27%), Positives = 261/559 (46%), Gaps = 52/559 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    +SG   +AL L+ ++  +  ++PD+Y+    L +C  + +   G ++H
Sbjct: 154 VFSWNVMVGGYGKSGLLDEALDLYHRMMWA-GVRPDVYTFPCVLRSCGGVPDWRMGREVH 212

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR G      V N ++++Y    D+++ ++VF  +   D  SW              
Sbjct: 213 AHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISW-------------- 258

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  ENG  + G+ LF  M   +V+ +  +  SV     
Sbjct: 259 -----------------NAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA-- 299

Query: 201 AGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           +GLL    F +++H L  K GF+  V+  N+LI MY + G +  A  VF        D +
Sbjct: 300 SGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTR--DAM 357

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           ++  M+ G    G  ++AL  +  M V ++ P ++T  S ++AC C     VG ++H  A
Sbjct: 358 TWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELA 417

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--QRNLGRS 372
              GF +Y  V+NA + MY+   +ID+A  +F  + EKD+VSW++MI+ +    RN    
Sbjct: 418 ESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNF--- 474

Query: 373 AILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
             L Y       ++P+  TF    +  A++G +   + IHA V   GI     + NALI 
Sbjct: 475 EALYYFRHMLADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALID 534

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K  +   A+  F     +++++WN +I GF+ +G     L  F++++     PDE T
Sbjct: 535 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVT 594

Query: 490 LSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-M 547
               L +C+R   +  G ++ H    K +++  +     M+ L ++ G L  +    N M
Sbjct: 595 FVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEM 654

Query: 548 MIEKDTISWNALISAYAQH 566
            I  D   W AL++    H
Sbjct: 655 PITPDAAVWGALLNGCRIH 673


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 224/660 (33%), Positives = 339/660 (51%), Gaps = 60/660 (9%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMHKLDVR 186
            +S    +G + +A  +  + P  D  VY  N++I    +NG  +  + LF  MH L   
Sbjct: 65  LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            DNY+F  V   C +   +  G   H+L   +GF   V V NAL+ MY  C ++ DA KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL-- 302
           F+E    V D +S+N +++  A +G+ + AL  F  M      RP  +T V+V+  C   
Sbjct: 185 FDEMS--VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242

Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM- 360
               +G Q+H  A+ S       V N  + MY+ CG +DEA  +F+ +  KD+VSWN M 
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302

Query: 361 ----------------------------------ISTYAQRNLGRSAILAYLEMQSVGIR 386
                                             IS YAQR LG  A+    +M S GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFI-------NGIITNIQVSNALISAYAKNER 436
           P+E T  S+L   AS G +   + IH +          NG      V N LI  YAK ++
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422

Query: 437 IKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMS--ELRPDEYTLSV 492
           +  A  +F ++SP  R+++TW  +I G+  +G   + L+  SE+     + RP+ +T+S 
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           AL +CA +++LR GKQIH Y L+N   +  + + N +I +YAKCG +  +  VF+ M+ K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           + ++W +L++ Y  HG G+EA+  F  M+ +G  K D  T   VL ACSH+G++D G   
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEY 601

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           F+ M   +G  P  +H +C++DLLGRAG L+ A R+I    ++     W A  S C  HG
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + LG   A  + E   +    Y LLSN+YA AG W++   IR L++  GV K+PGCSW+
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 169/630 (26%), Positives = 269/630 (42%), Gaps = 97/630 (15%)

Query: 41  LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
           L+LF  +HS     PD Y+      AC  + +   G   HA +L  G  +   V N +++
Sbjct: 112 LYLFGLMHSL-SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           +Y   R L   ++VF E+   DV SW + + +  K+G    A E+F +M +         
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE-------- 222

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGF 219
             GC                     R DN +  +VL  C + G    G+QLH     S  
Sbjct: 223 -FGC---------------------RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              + V N L+ MY  CG + +A  VF      V D +S+N M+ G + +GR E+A+  F
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVRLF 318

Query: 280 -----------------------------------RDMLVASLRPSELTFVSVMSACLCP 304
                                              R ML + ++P+E+T +SV+S C   
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378

Query: 305 RV---GYQVHAQAM-------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL--QEK 352
                G ++H  A+       K+G      V N  I MY+ C K+D A  +F  L  +E+
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           D+V+W  MI  Y+Q      A+    EM  +    RP+ FT    L   AS   + + + 
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498

Query: 408 IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           IHA+   N      + VSN LI  YAK   I  A  +F NM  +N +TW +L+ G+ ++G
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +  + L  F E+     + D  TL V L +C+    +  G +   Y  +   +  +S G 
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVFGVSPGP 615

Query: 527 ----AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
                ++ L  + G L+ +LR+   M +E   + W A +S    H  GK  +  + A + 
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH--GKVELGEYAAEKI 673

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
                    ++T + +  ++AG   D TRI
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRI 703



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 209/449 (46%), Gaps = 22/449 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  + + ++ G  + AL +F ++ +    +PD  +L   L  CA+L   + G QLH
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +A+ + +     V N ++ +Y     +     VFS +   DV SW   ++  +++G  +
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F+KM +     D+  ++A I+G  + G     +G+ R+M    ++ +  +  SVL
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372

Query: 197 SVC-DAGLLEFGRQLHSL-------VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           S C   G L  G+++H         + K+G      V+N LI MY  C  V  A  +F+ 
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSAC---LC 303
                 D +++ VM+ G +  G   +AL    +M       RP+  T    + AC     
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492

Query: 304 PRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
            R+G Q+HA A+++   A    VSN  I MY+ CG I +A ++F  +  K+ V+W ++++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGII 418
            Y     G  A+  + EM+ +G + D  T   +L   + SG I+  +E  +    + G+ 
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNM 447
              +    L+    +  R+  A ++   M
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEM 641



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 26/334 (7%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN--IITWNTLI 459
           I  V++IH  +   GI+T + +++ LIS Y     +  A  +     P +  +  WN+LI
Sbjct: 41  ISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
             +  NG   + L  F  +      PD YT      +C  ISS+R G+  H   L    I
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           S + +GNA++ +Y++C  L  + +VF+ M   D +SWN++I +YA+ G+ K A+  F  M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTR-----IFDSMVNDYGFIPAEDHLSCMLDL 634
            +    +PD  T   VL  C+  G    G +     +   M+ +  F+      +C++D+
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM-FVG-----NCLVDM 273

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL----EREQDK 690
             + G +DEA  V ++  ++    +W A+ +     G  ++GR    + L    + E+ K
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVV-SWNAMVA-----GYSQIGRFEDAVRLFEKMQEEKIK 327

Query: 691 PSVYVLLSNI--YAAAGLWEEAANIRELLKRTGV 722
             V    + I  YA  GL  EA  +   +  +G+
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361


>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 235/718 (32%), Positives = 370/718 (51%), Gaps = 77/718 (10%)

Query: 24  LNISLANLSRSGHYQDALHLFV-QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           LN S+    R     +AL LF  Q+        D  +++  L AC    ++  G Q+HA+
Sbjct: 46  LNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG--DSKLGCQIHAF 103

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A+ +G  ++  V N+++++Y  A        VF  + NPD+ SW T LS   +       
Sbjct: 104 AISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR------- 156

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
                                       D  +     M+   V  D  +  +VL+ C D 
Sbjct: 157 ---------------------------SDDALNFALRMNFTGVAFDAVTCTTVLAFCSDH 189

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
               FG QLHS + K G  C V V NALITMY  C      C++ E  +G          
Sbjct: 190 EGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRC------CRLVEARRGN--------- 234

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
              GL       EA++ F +ML   ++   ++F   +SAC   +   +G Q+H+ A+K G
Sbjct: 235 --SGL-------EAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIG 285

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           ++ +  V N  I+ YS C  I++A ++F  + ++++VSW TMIS   +      A   + 
Sbjct: 286 YDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEE-----DATSLFN 340

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNE 435
           EM+  G+ P++ TF  L+ +     +VE   MIH        ++ + VSN+LI+ YAK E
Sbjct: 341 EMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFE 400

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +  + ++F  ++ R II+WN+LI+G+  NG   + LQ F   LM E RP+E+T    LS
Sbjct: 401 SMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALM-ESRPNEFTFGSVLS 459

Query: 496 SCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           S A     S+RHG++ H ++LK  L +   + +A++ +YAK G +  SL VF+    K+ 
Sbjct: 460 SIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNE 519

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           ++W A+ISA+A+HG+ +  ++ FK M+  G +KPD  TF AV++AC   G+VD G ++F+
Sbjct: 520 VAWTAIISAHARHGDYEAVMNLFKDMEREG-VKPDSITFLAVITACGRKGMVDTGYQLFN 578

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           SMV D+   P+ +H S M+D+LGRAG L EAE  +      A      +L  AC  HGN+
Sbjct: 579 SMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNV 638

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + + +A  L+E E      YVL+SN+YA  G WE+ A IR+ ++  GV K+ G SW+
Sbjct: 639 DMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 696



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 164/692 (23%), Positives = 290/692 (41%), Gaps = 148/692 (21%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N +   ++  N  L+   RS    DAL+  ++++ +  +  D  + +T LA C++     
Sbjct: 138 NLNNPDIVSWNTVLSGFQRS---DDALNFALRMNFT-GVAFDAVTCTTVLAFCSDHEGFI 193

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR---------VFSEIQNP---- 121
           FG QLH+  L+ GL     V N ++++Y     LV  +R         VF E+       
Sbjct: 194 FGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLEAILVFLEMLKEGMKL 253

Query: 122 DVYSWTTFLSAC----------------TKMGHVDYA------------CE-------VF 146
           D  S+T  +SAC                 K+G+  +             CE       VF
Sbjct: 254 DHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVF 313

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLE 205
           + + DR++  +  MI+   E+        LF EM +  V  ++ +F  ++ ++    L+E
Sbjct: 314 ESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVE 368

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+ +H +  K+ F   ++V N+LITMY    ++ D+ KVFEE      + IS+N ++ G
Sbjct: 369 EGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELN--YREIISWNSLISG 426

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA-----CLCPRVGYQVHAQAMKSGFE 320
            A  G  +EAL  F   L+ S RP+E TF SV+S+      +  R G + H+  +K G  
Sbjct: 427 YAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLN 485

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               VS+A + MY+  G I E+  +F+    K+ V+W  +IS +A+     + +  + +M
Sbjct: 486 TNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDM 545

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           +  G++PD  TF                                 A+I+A  +   +   
Sbjct: 546 EREGVKPDSITF--------------------------------LAVITACGRKGMVDTG 573

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           YQ+F++M   ++I                            E  P+ Y+  V +    R 
Sbjct: 574 YQLFNSMVKDHLI----------------------------EPSPEHYSSMVDM--LGRA 603

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC---GDLDCSLRVFNMMIEKDTI--- 554
             L+  ++  G +     +S +       +L   C   G++D + RV + +IE + +   
Sbjct: 604 GRLKEAEEFVGQIPGGAGLSVLQ------SLLGACRIHGNVDMAKRVADDLIEMEPMGSG 657

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           S+  + + YA+ GE ++     K M++ G  K    ++  V  A        DG+     
Sbjct: 658 SYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDA--------DGSLYLHG 709

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
             +D  F P  + +  M + LG      E ER
Sbjct: 710 FSSDDKFHPQSEEIYRMAETLGLEMKFLEKER 741


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 205/606 (33%), Positives = 333/606 (54%), Gaps = 22/606 (3%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG-----LFREMHKLDVRRDNYSFA 193
           ++ A  +F  MP+++   +NA++     NGY  +G G     LF +M + + +   ++ +
Sbjct: 1   MELAERLFFGMPEKNGVSWNALL-----NGYAQLGDGKKVLKLFCKMKECETKFSKFTLS 55

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +VL  C + G L  G+ LH+L  +SG      +  +L+ MY  CG V DA KVF + +  
Sbjct: 56  TVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP 115

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
             D ++++ M+ GL   G  +EA   F  M     RP++ T  S++S        R G  
Sbjct: 116 --DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQS 173

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST-YAQRN 368
           +H    K GFE+   VSN  I MY     +++   +F  +   D+VSWN ++S  Y  + 
Sbjct: 174 IHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQT 233

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSN 425
            GR   + Y +M   G +P+ FTF S+L S   +   E  + +HA +  N    +  V  
Sbjct: 234 CGRGPRIFY-QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+  YAK   ++ A   F  +  R+I +W  +I+G+       + +++F ++    ++P
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKP 352

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +EYTL+  LS C+ +++L +G+Q+H   +K      + +G+A++ LY KCG ++ +  +F
Sbjct: 353 NEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +I +D +SWN +IS Y+QHG+G++A+  F+ M   G I PD+ATF  VLSACS  GLV
Sbjct: 413 KGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEG-IMPDEATFIGVLSACSFMGLV 471

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           ++G + FDSM   YG  P+ +H +CM+D+LGRAG  +E +  I   ++   S  W  +  
Sbjct: 472 EEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLG 531

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           AC  HGN+  G   A  L E E    S Y+LLSNI+A+ G W++  NIR L+   G+ K+
Sbjct: 532 ACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKE 591

Query: 726 PGCSWI 731
           PGCSW+
Sbjct: 592 PGCSWV 597



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/558 (27%), Positives = 259/558 (46%), Gaps = 55/558 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L   ++ G  +  L LF ++    + K   ++LST L  CAN  +   G  LHA AL
Sbjct: 20  NALLNGYAQLGDGKKVLKLFCKMKEC-ETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+G +    +  +++ +Y     +    +VF++I+NP                       
Sbjct: 79  RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP----------------------- 115

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                   D+  ++AMITG  + G+      LF  M +   R + ++ +S++S   + G 
Sbjct: 116 --------DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGD 167

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L +G+ +H  + K GF     V N LI MY     V D  KVFE       D +S+N ++
Sbjct: 168 LRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNP--DLVSWNALL 225

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G             F  ML+   +P+  TF+SV+ +C   L P  G QVHA  +K+  +
Sbjct: 226 SGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSD 285

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A + MY+    +++A + F RL  +DI SW  +IS YAQ +    A+  + +M
Sbjct: 286 DDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQM 345

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  GI+P+E+T  S L+    +  +E    +HA     G   +I V +AL+  Y K   +
Sbjct: 346 QREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCM 405

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A  IF  +  R+I++WNT+I+G+  +G   + L+ F  +L   + PDE T    LS+C
Sbjct: 406 EHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSAC 465

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN---MMIEKDTI 554
           + +  +  GK+      + + +SK+   N  I  YA   D+      FN   + IE+  +
Sbjct: 466 SFMGLVEEGKK------RFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNL 519

Query: 555 S-----WNALISAYAQHG 567
           +     W  ++ A   HG
Sbjct: 520 TPYSLIWETVLGACKLHG 537


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 218/714 (30%), Positives = 361/714 (50%), Gaps = 41/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++  R+G    AL  + ++     + PD+ +    + AC  L+N            
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKN------------ 153

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
               K    +++T+ SL  +  + V+                ++ + A  + G +D   +
Sbjct: 154 ---FKGIDFLSDTVSSLGMDCNEFVA----------------SSLIKAYLEYGKIDVPSK 194

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD++  +D  ++N M+ G  + G  D  I  F  M    +  +  +F  VLSVC + LL
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G QLH LV  SG     S+ N+L++MY  CG   DA K+F        D +++N M+
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR--ADTVTWNCMI 312

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-SACLCPRVGY--QVHAQAMKSGFE 320
            G    G +EE+L  F +M+ + + P  +TF S++ S      + Y  Q+H   M+    
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +++A I  Y  C  +  A  IF++    D+V +  MIS Y    L   ++  +  +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
             V I P+E T  S+L   G +  +++   +H F+   G      +  A+I  YAK  R+
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             AY+IF  +S R+I++WN++I     +  P   +  F ++ +S +  D  ++S ALS+C
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + S   GK IHG+++K++L S +   + +I +YAKCG+L  ++ VF  M EK+ +SWN
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+A   HG+ K+++  F  M +   I+PDQ TF  ++S+C H G VD+G R F SM  
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           DYG  P ++H +C++DL GRAG L EA   + S      +  W  L  AC  H N+ L  
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L++ +      YVL+SN +A A  WE    +R L+K   V K PG SWI
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 203/409 (49%), Gaps = 8/409 (1%)

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L  C +  LL  G+Q+H+ +  +  S        ++ MY  CG+  D  K+F       
Sbjct: 41  LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--VGYQVH 311
                +N ++      G + +AL  +  ML   + P   TF  ++ AC+  +   G    
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160

Query: 312 AQAMKS-GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           +  + S G +    V+++ I  Y   GKID    +F R+ +KD V WN M++ YA+    
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            S I  +  M+   I P+  TF  +L   AS   I++   +H  V ++G+     + N+L
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S Y+K  R   A ++F  MS  + +TWN +I+G++ +G   + L  F E++ S + PD 
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T S  L S ++  +L + KQIH Y++++++   + L +A+I  Y KC  +  +  +F+ 
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
               D + + A+IS Y  +G   +++  F+ +  V +I P++ T  ++L
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSIL 448



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 11/320 (3%)

Query: 289 PSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P  L+ +  + AC  P   R G QVHA  + +     +      + MY+ CG   +   +
Sbjct: 35  PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92

Query: 346 FARL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
           F RL  +   I  WN++IS++ +  L   A+  Y +M   G+ PD  TF  L+ +   ++
Sbjct: 93  FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152

Query: 404 M---VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
               ++ +   V   G+  N  V+++LI AY +  +I    ++F  +  ++ + WN ++N
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+   G     ++ FS + M ++ P+  T    LS CA    +  G Q+HG V+ + +  
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           + S+ N+++++Y+KCG  D + ++F MM   DT++WN +IS Y Q G  +E+++ F  M 
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332

Query: 581 DVGRIKPDQATFTAVLSACS 600
             G + PD  TF+++L + S
Sbjct: 333 SSG-VLPDAITFSSLLPSVS 351


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 219/686 (31%), Positives = 354/686 (51%), Gaps = 44/686 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L + L  C + +    G  +H      G ++   ++ +++  Y +  D  S + VF
Sbjct: 2   DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61

Query: 116 SEIQNP-DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                P DV  W   LSA T       A ++FD++              C  N Y     
Sbjct: 62  QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQL-------------NC--NSY----- 101

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                     VR D Y++  VL  C   G + +GR++H+ + K+G    V V ++L+ MY
Sbjct: 102 ----------VRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMY 151

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C   VDA K+F+E      D   +N ++      G+ E AL  F  M      P+ +T
Sbjct: 152 AKCDQFVDAIKLFDEFPQR--DVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVT 209

Query: 294 FVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F  V+S+C   L    G +VH + ++        V +A + MY  CG ++ A  +F ++ 
Sbjct: 210 FTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIP 269

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EM 407
            K+ ++WN MI+ Y+ +   RS I   + M   G +P   T  S++ ASS  +++   + 
Sbjct: 270 RKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKF 329

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH ++  N I  +I +  +LI  Y K   +  A  IF  +S   +++WN +I+G ++ G 
Sbjct: 330 IHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGN 389

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
            +Q L  +  +    ++PD  T S  LS+C+++++L  G+++H  ++ + L +   +  A
Sbjct: 390 HIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGA 449

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YAKCGD+D + ++F+ + ++D +SW ++I AY  HG+  EA+  F  MQ +  ++ 
Sbjct: 450 LLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLN-VRA 508

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF AVLSACSHAGLVD+G   F+ MV  Y   P  +H SC++DLLGRAG L EA  +
Sbjct: 509 DSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEI 568

Query: 648 INSQHIQARSDNWW--ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +     + RSD      LFSAC  H N  LG  I  +L+E + D PS Y+LLSN+YA+  
Sbjct: 569 LQRSK-ETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVN 627

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E   +R  +K  G+ K PGCSWI
Sbjct: 628 KWDEVRKVRRKMKELGLKKSPGCSWI 653



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 227/498 (45%), Gaps = 51/498 (10%)

Query: 24  LNISLANLSRSGH-----YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           L++SL N   S +     + +AL LF Q++ +  ++PD Y+    L AC  L    +G +
Sbjct: 68  LDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRR 127

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H + L+ GL     V ++++++Y      V   ++F E    DV  W   +S   K G 
Sbjct: 128 IHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGK 187

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            + A + FDKM                E G+E                 ++ +F  V+S 
Sbjct: 188 AEMALKTFDKMK---------------ELGFEP----------------NSVTFTVVVSS 216

Query: 199 CDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C   L LE G+++H  + +        V++AL+ MY  CG +  A +VFE+      + I
Sbjct: 217 CTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRK--NAI 274

Query: 258 SYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVH 311
           ++N M+ G +  G      E L+R  D      +P+ +T  S++   S  +  R G  +H
Sbjct: 275 TWNAMITGYSLKGDSRSCIELLMRMND---EGTKPTLMTLTSIIYASSRSVQLRHGKFIH 331

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +++  +    +  + I  Y  CG +  A  IF  + + ++VSWN MIS +       
Sbjct: 332 GYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHI 391

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A+  Y  M+   ++PD  TF S L++   +  ++    +H  +  + +  N  V  AL+
Sbjct: 392 QALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALL 451

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK   + +A ++FH +  R++++W ++I  +  +G   + L+ F E+    +R D  
Sbjct: 452 DMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSV 511

Query: 489 TLSVALSSCARISSLRHG 506
           T    LS+C+    +  G
Sbjct: 512 TFLAVLSACSHAGLVDEG 529



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 51/457 (11%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            +P+  + +  +++C  L N   G ++H   +   +     V + ++ +Y     L   K
Sbjct: 203 FEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAK 262

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF                               +K+P ++   +NAMITG +  G    
Sbjct: 263 EVF-------------------------------EKIPRKNAITWNAMITGYSLKGDSRS 291

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            I L   M+    +    +  S++      + L  G+ +H  + ++     + +  +LI 
Sbjct: 292 CIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLID 351

Query: 232 MYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            YF CG V  A  +F   +K  V   +S+NVM+ G   VG   +AL  + +M    ++P 
Sbjct: 352 FYFKCGYVSSAETIFRTISKNEV---VSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPD 408

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            LTF S +SAC        G ++H   +    EA   V  A + MY+ CG +DEA  +F 
Sbjct: 409 ALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFH 468

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
           +L ++D+VSW +MI  Y        A+  + EMQ + +R D  TF ++L++     +V+ 
Sbjct: 469 QLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVD- 527

Query: 408 IHAFVFINGIITN------IQVSNALISAYAKNERIKQAYQIFH--NMSPRNIITWNTLI 459
              +++ N ++        I+  + LI    +  R+ +AY+I      +  +I   +TL 
Sbjct: 528 -EGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLF 586

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  LL+   V G+Q   ++L+ E+ PD+ +  + LS+
Sbjct: 587 SACLLHNNFVLGIQ-IGKMLI-EVDPDDPSTYILLSN 621



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 84/349 (24%), Positives = 147/349 (42%), Gaps = 49/349 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S  G  +  + L +++ +    KP + +L++ + A +       G  +H Y L
Sbjct: 277 NAMITGYSLKGDSRSCIELLMRM-NDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYIL 335

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  +     +  +++  Y     + S + +F  I   +V SW   +S    +G+   A  
Sbjct: 336 RNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALH 395

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           ++D M                            +E H   V+ D  +F+S LS C     
Sbjct: 396 IYDNM----------------------------KEHH---VKPDALTFSSTLSACSQLAA 424

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ GR+LH  +          V+ AL+ MY  CG+V +A K+F +      D +S+  M+
Sbjct: 425 LDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKR--DLVSWTSMI 482

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA-----M 315
               S G+  EAL  F +M   ++R   +TF++V+SAC    +   GY    +      +
Sbjct: 483 FAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDI 542

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMIS 362
           K G E Y+ +    I +    G++ EA  I  R +E   DI   +T+ S
Sbjct: 543 KPGIEHYSCL----IDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFS 587



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 41/219 (18%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           SK  ++  N+ ++     G++  ALH++  +   H +KPD  + S+TL+AC+ L     G
Sbjct: 370 SKNEVVSWNVMISGHVMVGNHIQALHIYDNM-KEHHVKPDALTFSSTLSACSQLAALDKG 428

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            +LH   +   L+A   V   +L +Y    D+   +++F ++   D+ SWT+ + A    
Sbjct: 429 RELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSH 488

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G    A  +FD                               EM KL+VR D+ +F +VL
Sbjct: 489 GQASEALRLFD-------------------------------EMQKLNVRADSVTFLAVL 517

Query: 197 SVC------DAGLLEFGRQLHSLVTKSG---FSCLVSVV 226
           S C      D G + F   +     K G   +SCL+ ++
Sbjct: 518 SACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLL 556


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 247/756 (32%), Positives = 376/756 (49%), Gaps = 92/756 (12%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           S+ +L+ +GH+  AL     + +S     D ++L   + + A LR++     +H  +LR 
Sbjct: 18  SIRSLTAAGHHAAALRALSSLAASPSSALDHFALPPAIKSAAALRDSRSTRAIHGASLRR 77

Query: 87  GL--KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            L  +  P V+N +L+ Y  AR       +      P                       
Sbjct: 78  ALLHRPTPAVSNALLTAY--ARCGDLDAALALFAATP----------------------- 112

Query: 145 VFDKMPD-RDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRD--------NYSFAS 194
                PD RD   YN++I+           + LFR   H LD  RD        +++  S
Sbjct: 113 -----PDLRDAVSYNSLISA----------LCLFRRWGHALDALRDMLADHEVSSFTLVS 157

Query: 195 VLSVC----DAGLLEFGRQLHSLVTKSGF---SCLVSVVNALITMYFNCGNVVDACKVFE 247
           VL  C    D G    GR+ H+   K GF          NAL++MY   G V DA ++F 
Sbjct: 158 VLLACSHLADQGH-RLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFF 216

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-- 305
            +   V D +++N M+  L   GR EEA+    DM+   +RP  +TF S + AC      
Sbjct: 217 SSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELL 276

Query: 306 -VGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMI 361
            VG +VHA  +K     A + V++A + MY+S  ++  A  +F  + E  + +  WN MI
Sbjct: 277 GVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMI 336

Query: 362 STYAQRN-LGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
             YAQ   +   AI  +  M++  G  P E T   +L +    E+    E +H +V    
Sbjct: 337 CGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRD 396

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           + +N  V NAL+  YA+  R+ +A+ IF  +  R+I++WNTLI G ++ G   +  Q   
Sbjct: 397 MASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVR 456

Query: 477 ELLMS--------------------ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           E+ +                        P+  TL   L  CA +++   GK+IHGY +++
Sbjct: 457 EMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRH 516

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L S +++G+A++ +YAKCG L  +  VF+ +  ++ I+WN LI AY  HG G EA++ F
Sbjct: 517 ALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALF 576

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M   G   P++ TF A L+ACSH+GLVD G  +F  M  DYGF P     +C++D+LG
Sbjct: 577 DRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLG 636

Query: 637 RAGYLDEAERVINSQHI-QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           RAG LDEA  +I+S    + +   W  +  AC  H N++LGRI A  L E E D+ S YV
Sbjct: 637 RAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYV 696

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LL NIY+AAGLWE +  +R ++++ GV K+PGCSWI
Sbjct: 697 LLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWI 732


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 213/687 (31%), Positives = 363/687 (52%), Gaps = 46/687 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D   L   L AC N ++   G  +H   +  GL+    +   +++LY +       K VF
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVF 61

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             ++NP                     CE+          ++N ++ G T+N      + 
Sbjct: 62  DNMENP---------------------CEI---------SLWNGLMAGYTKNYMYVEALE 91

Query: 176 LFREM-HKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITM 232
           LF ++ H   ++ D+Y++ SVL  C  GL ++  G+ +H+ + K+G    + V ++L+ M
Sbjct: 92  LFEKLLHYPYLKPDSYTYPSVLKAC-GGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGM 150

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C     A  +F E      D   +N ++      G  +EAL  F  M      P+ +
Sbjct: 151 YAKCNAFEKAIWLFNEMPEK--DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSV 208

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  + +S+C   L    G ++H + + SGF   + +S+A + MY  CG ++ A  +F ++
Sbjct: 209 TITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQM 268

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
            +K +V+WN+MIS Y  +    S I  +  M + G++P   T  SL+   + S  +   +
Sbjct: 269 PKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGK 328

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H +   N I +++ ++++L+  Y K  +++ A  IF  +    +++WN +I+G++  G
Sbjct: 329 FVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEG 388

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L  FSE+  S + PD  T +  L++C+++++L  G++IH  +++  L +   +  
Sbjct: 389 KLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMG 448

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCG +D +  VF  + ++D +SW ++I+AY  HG+   A+  F  M     +K
Sbjct: 449 ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQ-SNMK 507

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD+ TF A+LSAC HAGLVD+G   F+ MVN YG IP  +H SC++DLLGRAG L EA  
Sbjct: 508 PDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYE 567

Query: 647 VINSQHIQARSDNWW--ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           ++  Q+ + R D      LFSAC  H N+ LG  IA  L++++ D  S Y+LLSN+YA+A
Sbjct: 568 ILQ-QNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASA 626

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
             W+E   +R  +K  G+ K PGCSWI
Sbjct: 627 HKWDEVRVVRSKMKELGLKKNPGCSWI 653



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 140/598 (23%), Positives = 254/598 (42%), Gaps = 75/598 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +++  Y +AL LF ++     LKPD Y+  + L AC  L     G  +H   ++ G
Sbjct: 77  MAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V ++++ +Y           +F+E+   DV  W T +S   + G+   A E F 
Sbjct: 137 LMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYF- 195

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                                      GL R   +     ++ +  + +S C A LL+  
Sbjct: 196 ---------------------------GLMR---RFGFEPNSVTITTAISSC-ARLLDLN 224

Query: 208 R--QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           R  ++H  +  SGF     + +AL+ MY  CG++  A +VFE+        +++N M+ G
Sbjct: 225 RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTV--VAWNSMISG 282

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAY 322
               G     +  F+ M    ++P+  T  S++  C    R+  G  VH   +++  ++ 
Sbjct: 283 YGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSD 342

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             ++++ + +Y  CGK++ A  IF  + +  +VSWN MIS Y        A+  + EM+ 
Sbjct: 343 VFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK 402

Query: 383 VGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             + PD  TF S+L +      +E  E IH  +    +  N  V  AL+  YAK   + +
Sbjct: 403 SYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A+ +F  +  R++++W ++I  +  +G     L+ F+E+L S ++PD  T    LS+C  
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGH 522

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
              +  G                   N M+ +Y                I      ++ L
Sbjct: 523 AGLVDEGCYYF---------------NQMVNVYG---------------IIPRVEHYSCL 552

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           I    + G   EA   ++ +Q    I+ D    + + SAC     +D G  I  ++++
Sbjct: 553 IDLLGRAGRLHEA---YEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID 607



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 127/285 (44%), Gaps = 35/285 (12%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ ++  N  ++     G     + LF ++++   +KP + +LS+ +  C+       G 
Sbjct: 270 KKTVVAWNSMISGYGLKGDSISCIQLFKRMYNE-GVKPTLTTLSSLIMVCSRSARLLEGK 328

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y +R  +++   + ++++ LY     +   + +F  I    V SW           
Sbjct: 329 FVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSW----------- 377

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                               N MI+G    G     +GLF EM K  V  D  +F SVL+
Sbjct: 378 --------------------NVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLT 417

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C     LE G ++H+L+ +        V+ AL+ MY  CG V +A  VF+       D 
Sbjct: 418 ACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR--DL 475

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +S+  M+    S G+   AL  F +ML ++++P  +TF++++SAC
Sbjct: 476 VSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSAC 520



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N+ ++     G   +AL LF ++  S+ ++PD  + ++ L AC+ L     G 
Sbjct: 371 KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY-VEPDAITFTSVLTACSQLAALEKGE 429

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H   +   L     V   +L +Y     +     VF  +   D+ SWT+ ++A    G
Sbjct: 430 EIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHG 489

Query: 138 HVDYACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
               A E+F +M      PDR    + A+++ C   G  D G   F +M
Sbjct: 490 QAYVALELFAEMLQSNMKPDR--VTFLAILSACGHAGLVDEGCYYFNQM 536


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 196/612 (32%), Positives = 328/612 (53%), Gaps = 10/612 (1%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  +S   K   +  A  VF+ +  +   +Y+ M+ G  +N      +  +  M   +V 
Sbjct: 80  TKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVM 139

Query: 187 RDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              Y F  +L +    L L  GR++H +V  +GF   +  + A++ +Y  C  + DA K+
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKM 199

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--- 302
           FE       D +S+N ++ G A  G    A+     M  A  +P  +T VSV+ A     
Sbjct: 200 FERMPQR--DLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLK 257

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G  +H  A ++GFE   +V+ A +  Y  CG +  A ++F  +  +++VSWNTMI 
Sbjct: 258 ALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMID 317

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIIT 419
            YAQ      A   +L+M   G+ P   +  G+L A +  G +E    +H  +    I  
Sbjct: 318 GYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF 377

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ V N+LIS Y+K +R+  A  +F N+  + ++TWN +I G+  NG   + L  F E+ 
Sbjct: 378 DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ 437

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
             +++PD +TL   +++ A +S  R  K IHG  ++  +   + +  A+I  +AKCG + 
Sbjct: 438 SHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQ 497

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + ++F++M E+  I+WNA+I  Y  +G G+EA+  F  MQ+ G +KP++ TF +V++AC
Sbjct: 498 TARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQN-GSVKPNEITFLSVIAAC 556

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH+GLV++G   F+SM  +YG  P  DH   M+DLLGRAG LD+A + I    ++     
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITV 616

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
             A+  AC  H N+ LG   A  L + + D    +VLL+N+YA+A +W++ A +R  +++
Sbjct: 617 LGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEK 676

Query: 720 TGVIKQPGCSWI 731
            G+ K PGCS +
Sbjct: 677 KGIQKTPGCSLV 688



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/601 (25%), Positives = 267/601 (44%), Gaps = 53/601 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   +++   +DA+  + ++    ++ P +Y  +  L       +   G ++H   +  G
Sbjct: 114 LKGYAKNSTLRDAVRFYERMRCD-EVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++       +++LY   R +    ++F  +   D+ SW T                   
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNT------------------- 213

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
                       ++ G  +NG+    + +  +M +   + D+ +  SVL +V D   L  
Sbjct: 214 ------------VVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRI 261

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDG 265
           GR +H    ++GF  +V+V  A++  YF CG+V  A  VF   KG    + +S+N M+DG
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF---KGMSSRNVVSWNTMIDG 318

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA--QAMKSGFE 320
            A  G  EEA   F  ML   + P+ ++ +  + AC        G  VH      K GF+
Sbjct: 319 YAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFD 378

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              SV N+ I+MYS C ++D A  +F  L+ K +V+WN MI  YAQ      A+  + EM
Sbjct: 379 --VSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEM 436

Query: 381 QSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           QS  I+PD FT  S+   LA        + IH       +  N+ V  ALI  +AK   I
Sbjct: 437 QSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAI 496

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A ++F  M  R++ITWN +I+G+  NG   + L  F+E+    ++P+E T    +++C
Sbjct: 497 QTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAAC 556

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           +    +  G      + +N  L   M    AM+ L  + G LD + +    M  K  I+ 
Sbjct: 557 SHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITV 616

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDS 614
             A++ A   H   K      K   ++  + PD   +  +L+   + A + D   R+  +
Sbjct: 617 LGAMLGACRIH---KNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTA 673

Query: 615 M 615
           M
Sbjct: 674 M 674



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 205/444 (46%), Gaps = 46/444 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  +++G  + A+ + +Q+  + + KPD  +L + L A A+L+    G  +H
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQ-KPDSITLVSVLPAVADLKALRIGRSIH 266

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            YA RAG +   +VA  +L  Y     + S + VF  + + +V SW T            
Sbjct: 267 GYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNT------------ 314

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                              MI G  +NG  +     F +M    V   N S    L  C 
Sbjct: 315 -------------------MIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACA 355

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G LE GR +H L+ +      VSV+N+LI+MY  C  V  A  VF   K      +++
Sbjct: 356 NLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTV--VTW 413

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
           N M+ G A  G V EAL  F +M    ++P   T VSV++A     V  Q   +H  A++
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIR 473

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +  +    V  A I  ++ CG I  A  +F  +QE+ +++WN MI  Y     GR A+  
Sbjct: 474 TLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDL 533

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           + EMQ+  ++P+E TF S++A+   SG +E  E ++ F  +    G+   +    A++  
Sbjct: 534 FNEMQNGSVKPNEITFLSVIAACSHSGLVE--EGMYYFESMKENYGLEPTMDHYGAMVDL 591

Query: 431 YAKNERIKQAYQIFHNMSPRNIIT 454
             +  R+  A++   +M  +  IT
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGIT 615


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 215/714 (30%), Positives = 356/714 (49%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +  G +  AL  ++++  +  + PD Y+    + AC  L++   G  +H    
Sbjct: 27  NWMIRGFTMMGQFNYALLFYLKMLGA-GVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GLK    V ++++ LY                                + GH+  A  
Sbjct: 86  LMGLKEDVFVGSSLIKLY-------------------------------AENGHLSDAQY 114

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +FD +P +D  ++N M+ G  +NG     I +F EM   +++ ++ +FA VLSVC +  +
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G QLH +    G      V N L+ MY  C  +  A K+F+ +     D +S+N ++
Sbjct: 175 LDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQ--SDLVSWNGII 232

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G    G + EA   FR M+ A ++P  +TF S +      L  +   ++H   ++    
Sbjct: 233 SGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVV 292

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + +A I +Y  C  ++ A  I  +    D V   TMIS Y      + A+ A+  +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               ++P   TF S+    A    + + + +H  +    +     V +A++  YAK  R+
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F+ ++ ++ I WN++I     NG P + +  F ++ M   R D  ++S ALS+C
Sbjct: 413 DLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +L +GK+IHG ++K  L S +   +++I +YAKCG+L+ S RVF+ M E++ +SWN
Sbjct: 473 ANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWN 532

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++ISAY  HG+ KE ++ F  M   G I+PD  TF  ++SAC HAG VD+G R +  M  
Sbjct: 533 SIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           +YG     +H +C+ D+ GRAG LDEA   INS      +  W  L  AC  HGN+ L  
Sbjct: 592 EYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAE 651

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L + +      YVLL+N+ A AG W +   +R ++K  GV K PG SWI
Sbjct: 652 VASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWI 705



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 233/447 (52%), Gaps = 13/447 (2%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G++ DA  +F   +   C   ++N M+ G   +G+   AL+ +  ML A + P +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQ-LGCTS-AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDK 58

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF  V+ AC      ++G  VH      G +    V ++ I +Y+  G + +A  +F  
Sbjct: 59  YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           + +KD V WN M++ Y +     +AI  +LEM+   I+P+  TF  +L   AS   +++ 
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H      G+  +  V+N L++ Y+K + ++ A ++F      ++++WN +I+G++ N
Sbjct: 179 TQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   +    F  ++ + ++PD  T +  L     + SL+H K+IHGY++++ ++  + L 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y KC D++ + ++       DT+    +IS Y  +G+ KEA+  F+ +    R+
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERM 357

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEA 644
           KP   TF+++  A +    ++ G  +  S++     +  + H+ S +LD+  + G LD A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK--LDEKCHVGSAILDMYAKCGRLDLA 415

Query: 645 ERVINSQHIQARSDNWWALFSACAAHG 671
            RV N +  +  +  W ++ ++C+ +G
Sbjct: 416 CRVFN-RITEKDAICWNSMITSCSQNG 441


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 222/665 (33%), Positives = 347/665 (52%), Gaps = 23/665 (3%)

Query: 67  CANLRN-AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE------IQ 119
           C + RN  +  N   A +    L A  H  +++L  Y   R L   K +         + 
Sbjct: 53  CGDFRNNLSNSNTTKALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLH 112

Query: 120 NPDVYSWTTFLSACTKM-GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           +P+     + L+      G V  A ++FD + D  L ++NA+I    + G+    + +F 
Sbjct: 113 SPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFD 172

Query: 179 EM-HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
            M        D Y+F  V+  C    +L  G  +H     SGFS  + V N+L+ MY NC
Sbjct: 173 SMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNC 232

Query: 237 GNVVDACKVFEEA-KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           G V  A +VF    K  V   +S+N M+ G    GR EEAL  F  M+ A + P   T V
Sbjct: 233 GKVGLARQVFNVMLKRSV---VSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIV 289

Query: 296 SVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S + +C   +   +G +VH    K+  +    V NA + MYS CG +DEA ++FA  +EK
Sbjct: 290 SALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEK 349

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIH 409
           D+++W +MI+ Y      +SA+     MQ  G+ P+  T  SLL   AS   ++  + +H
Sbjct: 350 DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLH 409

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A+V    + +++ V  ALI  YAK   +  ++Q+F   S +  + WN L++G + N    
Sbjct: 410 AWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAR 469

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + +  F  +L+ E+  +  T +  + + A ++ L+    +H Y++++  ISK+++   +I
Sbjct: 470 EAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLI 529

Query: 530 TLYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            +Y+KCG LD + ++F+ +   EKD I W+ LI+ Y  HG G+ AV  F  M   G ++P
Sbjct: 530 DMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSG-MQP 588

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           ++ TFT+VL ACSH GLVDDG  +F  M+ +Y   P  +H +C++DLLGRAG LDEA  +
Sbjct: 589 NEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDL 648

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I S   Q     W AL  AC  H N+ LG + A  L E E +    Y+LL+NIYAA G W
Sbjct: 649 IKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRW 708

Query: 708 EEAAN 712
           ++A N
Sbjct: 709 KDAEN 713



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 249/543 (45%), Gaps = 44/543 (8%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G + DAL +F  +  S K  PD Y+    + AC+ +     G  +H  AL +G  +   V
Sbjct: 162 GFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFV 221

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N++L++Y N   +   ++VF+ +    V SW T +S                       
Sbjct: 222 QNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMIS----------------------- 258

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                   G  +NG  +  + +F  M    V  D+ +  S L  C     LE G ++H L
Sbjct: 259 --------GWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKL 310

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K+     + V NAL+ MY  CG + +A  VF E K    D I++  M++G    G  +
Sbjct: 311 VQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEK--DVITWTSMINGYIMNGNAK 368

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            AL     M +  + P+ +T  S++SAC    C + G  +HA  M+   ++   V  A I
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALI 428

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ C  +  +  +FA+   K  V WN ++S      L R A+  +  M    +  +  
Sbjct: 429 DMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHA 488

Query: 391 TFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           TF S++ +      ++ V  +H+++  +G I+ I V   LI  Y+K   +  A++IF  +
Sbjct: 489 TFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEI 548

Query: 448 --SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               ++II W+ LI G+ ++G     +  F++++ S ++P+E T +  L +C+    +  
Sbjct: 549 PNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDD 608

Query: 506 GKQIHGYVLKNNLISKM-SLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAY 563
           G  +  Y+++N   S + +    ++ L  + G LD +  +  +M  +++   W AL+ A 
Sbjct: 609 GLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGAC 668

Query: 564 AQH 566
             H
Sbjct: 669 LIH 671



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 24/406 (5%)

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFT 391
           Y+ CG +  A  +F  L +  +  WN +I  Y  +     A+  +  M   G   PD++T
Sbjct: 127 YAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYT 186

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           F  ++ +   + M+    +IH    ++G  +N+ V N+L++ Y    ++  A Q+F+ M 
Sbjct: 187 FPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVML 246

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            R++++WNT+I+G+  NG P + L  F+ ++ + + PD  T+  AL SC  +  L  G +
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIK 306

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H  V KN+L  K+ + NA++ +Y++CG +D +  VF    EKD I+W ++I+ Y  +G 
Sbjct: 307 VHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGN 366

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF-----DSMVNDYGFIP 623
            K A++   AMQ  G + P+  T  ++LSAC+    +  G  +        + +D   + 
Sbjct: 367 AKSALALCPAMQLDGVV-PNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVT 425

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL- 682
           A      ++D+  +   +  + +V     ++ R+  W AL S    +    L R   GL 
Sbjct: 426 A------LIDMYAKCNAVSYSFQVFAKTSMK-RTVPWNALLSGLIHN---ELAREAVGLF 475

Query: 683 ---LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
              L+E  +   + +  +   YA     ++  N+   L R+G I +
Sbjct: 476 KSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISK 521



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 205/461 (44%), Gaps = 49/461 (10%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  ++   ++G  ++AL +F  +  + +++PD  ++ + L +C +L+    G 
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDA-RVEPDSATIVSALPSCGHLKELELGI 305

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H    +  L+    V N ++ +Y     +     VF+E +  DV +WT+         
Sbjct: 306 KVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTS--------- 356

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                                 MI G   NG     + L   M    V  +  + AS+LS
Sbjct: 357 ----------------------MINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLS 394

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C +   L+ G+ LH+ V +      V VV ALI MY  C  V  + +VF  AK  +   
Sbjct: 395 ACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVF--AKTSMKRT 452

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV---HAQ 313
           + +N ++ GL       EA+  F+ ML+  +  +  TF SV+ A        QV   H+ 
Sbjct: 453 VPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSY 512

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNTMISTYAQRNLGR 371
            ++SGF +  +V    I MYS CG +D A  IF  +  +EKDI+ W+ +I+ Y     G 
Sbjct: 513 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 572

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS------N 425
           +A+L + +M   G++P+E TF S+L +     +V+          +I N   S       
Sbjct: 573 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVD--DGLTLFKYMIENYPSSPLPNHYT 630

Query: 426 ALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLN 465
            ++    +  R+ +AY +  +M   +N   W  L+   L++
Sbjct: 631 CVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIH 671


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 202/591 (34%), Positives = 325/591 (54%), Gaps = 12/591 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFG 207
           MPDR+   +  +I G  ++   D  + LF  +H+     + + F ++L +       E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGL 266
             LH+ + K G      V  ALI  Y  CG+V  A + F+      C D +S+  M+   
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFD---AIACKDMVSWTGMVACY 117

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           A   R +++L  F +M +    P+  TF  V+ AC+      VG  VH   +K+ +E   
Sbjct: 118 AENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDL 177

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V    + +Y+  G  ++   +F  + + D++ W+ MIS YAQ N  R A+  + +M+  
Sbjct: 178 YVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRA 237

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            + P++FTF S+L S   IE +++   +H  V   G+  N+ VSNAL+  YAK  R+  +
Sbjct: 238 FVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNS 297

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  +  RN +TWNT+I G++ +G   + L  +  +L  +++  E T S  L +CA +
Sbjct: 298 MKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASL 357

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +++  G QIH   LK      + +GNA+I +YAKCG +  +  VF+M+ E+D ISWNA+I
Sbjct: 358 AAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMI 417

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y+ HG   EA+  F+ MQ+   + P++ TF ++LSACS+AGL+D G   F SMV DYG
Sbjct: 418 SGYSMHGLVGEALKAFQMMQETECV-PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H +CM+ LLGR+G+LD+A ++I    ++     W AL  AC  H ++ LG + A
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSA 536

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +L+ +    + +VLLSNIYA    W   A++R+ +K  GV K+PG SWI
Sbjct: 537 QQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWI 587



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 251/528 (47%), Gaps = 33/528 (6%)

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKR----------VFSEIQNPDVYSWTTFLSACT 134
           R G +  P V  TIL L      LVSV+           ++      + +  T  + A  
Sbjct: 34  REGHELNPFVFTTILKL------LVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYA 87

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G V+ A + FD +  +D+  +  M+    EN      + LF EM  +    ++++FA 
Sbjct: 88  VCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAG 147

Query: 195 VLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           VL  C  GL  F  G+ +H  V K+ +   + V   L+ +Y   G+  D  +VFEE   +
Sbjct: 148 VLKAC-IGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH 206

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
             D I ++ M+   A   +  EA+  F  M  A + P++ TF SV+ +C      ++G Q
Sbjct: 207 --DVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQ 264

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH   +K G +    VSNA + +Y+ CG++D +  +F  L  ++ V+WNTMI  Y Q   
Sbjct: 265 VHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGD 324

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
           G  A+  Y  M    ++  E T+ S+L   AS   +E+   IH+         ++ V NA
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNA 384

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI  YAK   IK A  +F  +S R+ I+WN +I+G+ ++G   + L+ F  +  +E  P+
Sbjct: 385 LIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPN 444

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVF 545
           + T    LS+C+    L  G+     ++++  I   M     M+ L  + G LD ++++ 
Sbjct: 445 KLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLI 504

Query: 546 NMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQAT 591
             + +E +   W AL+ A   H +    +    + Q + +I P D+AT
Sbjct: 505 EEIPLEPNVKVWRALLGACVIHNDVDLGI---MSAQQILQIDPQDEAT 549



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 227/478 (47%), Gaps = 45/478 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  + +  +QD+L LF ++       P+ ++ +  L AC  L   + G  +H   L+  
Sbjct: 114 VACYAENDRFQDSLQLFAEMRMV-GFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTC 172

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   +V   +L LY                               TK G  +    VF+
Sbjct: 173 YEMDLYVGVGLLDLY-------------------------------TKFGDANDVLRVFE 201

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           +MP  D+  ++ MI+   ++      + LF +M +  V  + ++FASVL  C +   L+ 
Sbjct: 202 EMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQL 261

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+H  V K G    V V NAL+ +Y  CG + ++ K+F E      + +++N M+ G 
Sbjct: 262 GKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNR--NEVTWNTMIVGY 319

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
              G  ++AL  +++ML   ++ SE+T+ SV+ AC       +G Q+H+ ++K+ ++   
Sbjct: 320 VQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDV 379

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V NA I MY+ CG I  A ++F  L E+D +SWN MIS Y+   L   A+ A+  MQ  
Sbjct: 380 VVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQET 439

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVE-MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
              P++ TF S+L++   +G +++ +    + V   GI   ++    ++    ++  + +
Sbjct: 440 ECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDK 499

Query: 440 AYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           A ++   +    N+  W  L+   +++     G+    ++L  ++ P +    V LS+
Sbjct: 500 AVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQIL--QIDPQDEATHVLLSN 555



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 141/285 (49%), Gaps = 35/285 (12%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  +  ++  ++S   ++A+ LF Q+  +  L P+ ++ ++ L +CA++ N   G 
Sbjct: 205 KHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL-PNQFTFASVLQSCASIENLQLGK 263

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+H + L+ GL     V+N ++ +Y     L +  ++F E+ N +  +W           
Sbjct: 264 QVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTW----------- 312

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                               N MI G  ++G  D  + L++ M +  V+    +++SVL 
Sbjct: 313 --------------------NTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C +   +E G Q+HSL  K+ +   V V NALI MY  CG++ +A  VF+       D 
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSER--DE 410

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           IS+N M+ G +  G V EAL  F+ M      P++LTFVS++SAC
Sbjct: 411 ISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSAC 455


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 230/717 (32%), Positives = 380/717 (52%), Gaps = 46/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  ++ G  ++A+  F+++  +  LK    SL + L+A A+L    +G+ +HA A 
Sbjct: 278 NVMISGHAKRGFAEEAISFFLELKKT-GLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL    +V + ++++Y                            + C+KM   D A +
Sbjct: 337 KEGLDDNVYVGSALVNMY----------------------------AKCSKM---DAAKQ 365

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VF+ + +R++ ++NAM+ G  +NG     +  F  M +   + D ++F S+ S C +   
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHY 425

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L FG QLH+++ K+ F+  + V NAL+ MY   G + +A K FE  K  + D++S+N ++
Sbjct: 426 LNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMK--IHDNVSWNAII 483

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
            G       +EA   FR M+   + P E++  S++SAC      + G Q H   +K G +
Sbjct: 484 VGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLD 543

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             T   ++ I MY  CG +  A  +F  +  +++VS N +I+ Y   +L   AI  + E+
Sbjct: 544 TSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEI 602

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ-VSNALISAYAKNER 436
           Q VG++P E TF  LL       M+ +   IH  V   G +++ + V  +L+  Y  ++R
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQR 662

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
              +  +F  +  P+ ++ W  LI+G+       + LQ +  +    + PD+   +  L 
Sbjct: 663 FVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLR 722

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD-TI 554
           +CA +SSL++G++IH  +            +++I +YAKCGD+  SL+VF  M  ++  I
Sbjct: 723 ACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVI 782

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I   A++G  +EA+  FK M+    I PD+ TF  VLSACSHAG V +G ++FD 
Sbjct: 783 SWNSMIVGLAKNGYAEEALEIFKQMEQQS-IIPDEVTFLGVLSACSHAGRVSEGRKVFDL 841

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MVN+Y  +P  DHL CM+D+LGR G+L+EAE  IN    +A    W  L  AC  HG+  
Sbjct: 842 MVNNYKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEV 901

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+  A  L+E +    S YVLLS+IYA +  W  A ++R  +K  GV K PG SWI
Sbjct: 902 RGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWI 958



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 196/758 (25%), Positives = 330/758 (43%), Gaps = 89/758 (11%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           +H+++P+ ++ +  L+AC+ L++  FG Q+H    + G          ++ +Y   R L 
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-------------------- 149
             + VF    N D  SWT  ++   + G    A +VFD+M                    
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254

Query: 150 ---------------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                          P+ ++  +N MI+G  + G+ +  I  F E+ K  ++    S  S
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314

Query: 195 VLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS +    +L +G  +H+  TK G    V V +AL+ MY  C  +  A +VF       
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER- 373

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + + +N M+ G A  G  +E +  F  M     +P E TF S+ SAC        G Q+
Sbjct: 374 -NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K+ F +   V+NA + MY+  G + EA   F  ++  D VSWN +I  Y Q    
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A   +  M S G+ PDE +  S++++   ++ +   +  H  +   G+ T+    ++L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSL 552

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y K   +  A  +F++M  RN+++ N LI G+ + G   + +  F E+ M  L+P E
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTE 611

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL-GNAMITLYAKCGDLDCSLRVFN 546
            T +  L  C     L  G+QIHG V+K   +S   +   +++ LY        S  +F+
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFS 671

Query: 547 -MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
            +   K  + W ALIS YAQ    ++A+  ++ M+    I PDQA F +VL AC+    +
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRS-DNILPDQAAFASVLRACAGMSSL 730

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDL------------------------------- 634
            +G  I  S++   GF   E   S ++D+                               
Sbjct: 731 QNGQEI-HSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIV 789

Query: 635 -LGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
            L + GY +EA  +   +  Q I      +  + SAC+  G +  GR +  L++   +  
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLL 849

Query: 691 PSVYVL--LSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           P V  L  + +I    G   EA    E + + G    P
Sbjct: 850 PRVDHLGCMVDILGRWGFLNEA---EEFINKLGCKADP 884



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 247/482 (51%), Gaps = 41/482 (8%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G+VD+A + F ++  +D+  +N++++   ++G     +  F  M   +VR + ++FA
Sbjct: 87  VKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFA 146

Query: 194 SVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            VLS C +GL  + FGRQ+H  V K+GF         LI MY  C  + DA  VF+ A  
Sbjct: 147 MVLSAC-SGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALN 205

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              D +S+  ++ G    G   EA+  F  M      P ++T V+V++A           
Sbjct: 206 --LDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------- 252

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                Y + G++ +A  +F ++   ++V+WN MIS +A+R    
Sbjct: 253 ---------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            AI  +LE++  G++    + GS+L++   + M+    M+HA     G+  N+ V +AL+
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK  ++  A Q+F+++  RNI+ WN ++ GF  NG   + ++ FS +     +PDE+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T +   S+CA +  L  G Q+H  ++KN   S + + NA++ +YAK G L  + + F +M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D +SWNA+I  Y Q     EA   F+ M   G + PD+ +  +++SAC++   +  G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVQELKRG 530

Query: 609 TR 610
            +
Sbjct: 531 QQ 532



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 220/490 (44%), Gaps = 55/490 (11%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   + +HS   K G      + N ++ +Y  CGNV  A K F   +    D  ++N ++
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKK--DVFAWNSVL 114

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
                 G     +  F  M    +RP+E TF  V+SAC   +    G QVH    K+GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             +      I MY+ C  + +A ++F      D VSW  +I+ Y +      A+  +  M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           Q VG  PD+ T            +V +++A+V +                     R+  A
Sbjct: 235 QRVGHAPDQIT------------LVTVVNAYVALG--------------------RLADA 262

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  +   N++ WN +I+G    GF  + +  F EL  + L+    +L   LS+ A +
Sbjct: 263 RKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASL 322

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S L +G  +H    K  L   + +G+A++ +YAKC  +D + +VFN + E++ + WNA++
Sbjct: 323 SMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAML 382

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             +AQ+G  +E +  F  M+  G  +PD+ TFT++ SAC+    ++ G ++   M+ +  
Sbjct: 383 GGFAQNGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKN-K 440

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F       + ++D+  ++G L EA +                 F     H N+    II 
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARK----------------QFELMKIHDNVSWNAIIV 484

Query: 681 GLLLEREQDK 690
           G + E   D+
Sbjct: 485 GYVQEEYNDE 494



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 12/327 (3%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   ++IH+     G+     + N ++  Y K   +  A + F  +  +++  WN++++ 
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +L +G     +Q F  +   E+RP+E+T ++ LS+C+ +  +  G+Q+H  V K     +
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
                 +I +YAKC  L  +  VF+  +  DT+SW ALI+ Y + G   EAV  F  MQ 
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           VG   PDQ T   V++A    G + D  ++F  + N     P     + M+    + G+ 
Sbjct: 237 VGH-APDQITLVTVVNAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFA 290

Query: 642 DEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV--L 696
           +EA      +    ++A   +  ++ SA A+   L  G ++     +   D  +VYV   
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD-NVYVGSA 349

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVI 723
           L N+YA     + A  +   L    ++
Sbjct: 350 LVNMYAKCSKMDAAKQVFNSLGERNIV 376



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 65/301 (21%)

Query: 476 SELLMSELRPDEYTLSVALSSCARISS--------------LRHGKQIHGYVLKNNLISK 521
           ++ L+  L P    L + L  C RI +              L   K IH   LK  +  K
Sbjct: 16  NQQLVKNLNPHSEFLQICLQHCWRIQAHNLFDEKPKPVLQALSTAKVIHSKSLKIGVGLK 75

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             LGN ++ LY KCG++D + + F+ + +KD  +WN+++S Y  HG     V  F  M +
Sbjct: 76  GLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWN 135

Query: 582 VGRIKPDQATFTAVLSACS--------------------------HAGLVD--------- 606
              ++P++ TF  VLSACS                            GL+D         
Sbjct: 136 -HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLG--RAGYLDEAERVINSQHIQARSDNWWALF 664
           D   +FD  +N        D +S    + G  R G+  EA +V +       + +   L 
Sbjct: 195 DARLVFDGALN-------LDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLV 247

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVY---VLLSNIYAAAGLWEEAANIRELLKRTG 721
           +   A+  + LGR+     L  +   P+V    V++S  +A  G  EEA +    LK+TG
Sbjct: 248 TVVNAY--VALGRLADARKLFTQIPNPNVVAWNVMISG-HAKRGFAEEAISFFLELKKTG 304

Query: 722 V 722
           +
Sbjct: 305 L 305


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 223/744 (29%), Positives = 387/744 (52%), Gaps = 62/744 (8%)

Query: 1   MLQR-RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYS 59
           +L+R R+T+T+A N+             +A+ S+SG   +   L+  +     L P   +
Sbjct: 280 LLKRIRMTSTVAWNA------------VIASYSQSGLDSEVFGLYKDM-KKQGLMPTRST 326

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
            ++ L+A AN+     G Q+HA A++ GL A   V +++++LY                 
Sbjct: 327 FASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLY----------------- 369

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
                          K G +  A +VFD   ++++ ++NA++ G  +N  ++  I +F+ 
Sbjct: 370 --------------VKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQY 415

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M + D+  D+++F SVL  C +   L+ GRQ+H +  K+G    + V NA++ MY   G 
Sbjct: 416 MRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGA 475

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A  +F      V D +S+N ++ GLA      EA+   + M    +   E++F + +
Sbjct: 476 IDVAKALFSLIP--VKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAI 533

Query: 299 SAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           +AC        G Q+H+ ++K    +  +V ++ I +YS  G ++ +  + A +    IV
Sbjct: 534 NACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIV 593

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-----EMIHA 410
             N +I+   Q N    AI  + ++   G +P  FTF S+L  SG    V     + +H 
Sbjct: 594 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSIL--SGCTRPVSSVIGKQVHC 651

Query: 411 FVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFP 468
           +   + I+  +  +  +L+  Y K + ++ A ++   +   +N++ W   I+G+  NG+ 
Sbjct: 652 YTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYS 711

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
           VQ L  F  +   ++R DE T +  L +C+ +++L  GK+IHG ++K+  +S  +  +A+
Sbjct: 712 VQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSAL 771

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTI-SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           + +Y+KCGD+  S  +F  +  +  I  WN++I  +A++G   EA+  F+ MQ+  +IKP
Sbjct: 772 MDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQE-SQIKP 830

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  T   VL ACSHAGL+ +G   FDSM   YG +P  DH +C++DLLGR G+L +A+ V
Sbjct: 831 DDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEV 890

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I+    +A    W    +AC  H +   G++ A  L+E E    S YV LS+++AAAG W
Sbjct: 891 IDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNW 950

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
            EA   RE ++  GV+K PGCSWI
Sbjct: 951 VEAKVAREAMREKGVMKFPGCSWI 974



 Score =  258 bits (660), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 185/653 (28%), Positives = 317/653 (48%), Gaps = 50/653 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RSG  +D L  F +I  S    PD + ++  L+AC+ L     G Q+H   L++G  + 
Sbjct: 132 ARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSS 191

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
                 ++ +Y    ++   +R+F  I  PD   WT+ ++   ++G    A  +F +M  
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251

Query: 150 ----PDRDLPV-----------------------------YNAMITGCTENGYEDIGIGL 176
               PD+   V                             +NA+I   +++G +    GL
Sbjct: 252 MGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGL 311

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +++M K  +     +FAS+LS   A +  F  GRQ+H+   K G    V V ++LI +Y 
Sbjct: 312 YKDMKKQGLMPTRSTFASILSAA-ANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYV 370

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G + DA KVF+ +     + + +N ++ G       EE +  F+ M  A L   + TF
Sbjct: 371 KHGCISDAKKVFDFSTEK--NIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTF 428

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           VSV+ AC+      +G QVH   +K+G +A   V+NA + MYS  G ID A  +F+ +  
Sbjct: 429 VSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPV 488

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MI 408
           KD VSWN +I   A       AI     M+  GI  DE +F + + +   I  +E    I
Sbjct: 489 KDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQI 548

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+      + +N  V ++LI  Y+K   ++ + ++  ++   +I+  N LI G + N   
Sbjct: 549 HSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNRE 608

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNA 527
            + ++ F ++L    +P  +T +  LS C R  S   GKQ+H Y LK+ ++++  SLG +
Sbjct: 609 DEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGIS 668

Query: 528 MITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +Y KC  L+ + ++   + + K+ + W A IS YAQ+G   +++  F  M+    ++
Sbjct: 669 LVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYD-VR 727

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
            D+ATFT+VL ACS    + DG  I   +V   GF+  E   S ++D+  + G
Sbjct: 728 SDEATFTSVLKACSEMAALTDGKEIHGLIVKS-GFVSYETATSALMDMYSKCG 779



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 239/475 (50%), Gaps = 44/475 (9%)

Query: 188 DNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D +  A VLS C   G LE GRQ+H  V KSGF   V     L+ MY  CG V DA ++F
Sbjct: 156 DQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMF 215

Query: 247 EEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           +   G  C D I +  M+ G   VGR ++AL  F  M      P ++T V++        
Sbjct: 216 D---GIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTI-------- 264

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
                                   I+  +S G++ +A  +  R++    V+WN +I++Y+
Sbjct: 265 ------------------------ISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYS 300

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQ 422
           Q  L       Y +M+  G+ P   TF S+L+++  +   +    IHA    +G+  N+ 
Sbjct: 301 QSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVF 360

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V ++LI+ Y K+  I  A ++F   + +NI+ WN ++ GF+ N    + +Q F  +  ++
Sbjct: 361 VGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRAD 420

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           L  D++T    L +C  + SL  G+Q+H   +KN + + + + NAM+ +Y+K G +D + 
Sbjct: 421 LEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAK 480

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+++  KD++SWNALI   A + E  EA++  K M+  G I  D+ +F   ++ACS+ 
Sbjct: 481 ALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYG-IALDEVSFATAINACSNI 539

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
             ++ G +I  + +  Y         S ++DL  + G ++ + +V+   H+ A S
Sbjct: 540 WAIETGKQIHSASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVL--AHVDASS 591



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/485 (22%), Positives = 205/485 (42%), Gaps = 58/485 (11%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH+ + + G      + +AL+ +Y   G V  A +      G      + + ++   A  
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 270 GRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRVG-----YQVHAQAMKSGFEAYT 323
           G   + L  F+ +  +    P +     V+SAC   R+G      QVH   +KSGF +  
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSAC--SRLGALEHGRQVHCDVLKSGFCSSV 192

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
                 + MY+ CG++D+A  +F  +   D + W +MI+ Y +    + A+  +  M+ +
Sbjct: 193 FCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKM 252

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           G  PD+ T                                   +IS  A   R+  A  +
Sbjct: 253 GSVPDQVT--------------------------------CVTIISTLASMGRLGDARTL 280

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
              +   + + WN +I  +  +G   +    + ++    L P   T +  LS+ A +++ 
Sbjct: 281 LKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAF 340

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+QIH   +K+ L + + +G+++I LY K G +  + +VF+   EK+ + WNA++  +
Sbjct: 341 DEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGF 400

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q+   +E +  F+ M+    ++ D  TF +VL AC +   +D G ++    + + G   
Sbjct: 401 VQNELQEETIQMFQYMRR-ADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKN-GMDA 458

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
                + MLD+  + G +D A+                ALFS      ++    +I GL 
Sbjct: 459 DLFVANAMLDMYSKLGAIDVAK----------------ALFSLIPVKDSVSWNALIVGLA 502

Query: 684 LEREQ 688
              E+
Sbjct: 503 HNEEE 507



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 114/204 (55%), Gaps = 4/204 (1%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH--NMSPRNIITWNTLINGFLL 464
           ++HA +   G+    ++ +AL+  Y ++ R+  A++       +P +    +++++    
Sbjct: 74  VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133

Query: 465 NGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
           +G P   L  F  +  S    PD++ ++V LS+C+R+ +L HG+Q+H  VLK+   S + 
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVF 193

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
               ++ +YAKCG++D + R+F+ +   DTI W ++I+ Y + G  ++A++ F  M+ +G
Sbjct: 194 CQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMG 253

Query: 584 RIKPDQATFTAVLSACSHAGLVDD 607
            + PDQ T   ++S  +  G + D
Sbjct: 254 SV-PDQVTCVTIISTLASMGRLGD 276


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 219/714 (30%), Positives = 361/714 (50%), Gaps = 41/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++  R G    AL  + ++     + PD+ +    + AC  L+N            
Sbjct: 103 NSIISSFVRMGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKN------------ 149

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
               K    +++T+ SL  +  + V+                ++ + A  + G +D A +
Sbjct: 150 ---FKGIEFLSDTVSSLGMDCNEFVA----------------SSLIKAYLEYGKIDVAGK 190

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD++  +D  ++N M+ G  + G  D  I  F  M    +  +  +F  VLSVC + LL
Sbjct: 191 LFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLL 250

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G QLH LV  SG     S+ N+L++MY  CG   DA K+F        D +++N M+
Sbjct: 251 IDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSR--ADTVTWNCMI 308

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-SACLCPRVGY--QVHAQAMKSGFE 320
            G    G +EE+LI F +M+ + + P  +TF S++ S      + Y  Q+H   M+    
Sbjct: 309 SGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSIS 368

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +++A I  Y  C  +  A  IF++    D+V +  MIS Y    L   A+  +  +
Sbjct: 369 LDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWL 428

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
             V I P+E T  S+L   G +  +++   +H F+   G      +  A+I  YAK  R+
Sbjct: 429 VKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 488

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             AY+IF  +S R+I++WN++I     +  P   +  F ++ +S +  D  ++S ALS+C
Sbjct: 489 NLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSAC 548

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + S   GK IHG+++K++L   +   + +I +YAKCG+L  ++ VF+ M EK+ +SWN
Sbjct: 549 ANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWN 608

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+AY  HG+ K+++  F  M +    +PDQ TF  ++S C H G VD+G R F SM  
Sbjct: 609 SIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQ 668

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           DYG  P ++H +C++DL GRAG L EA   + S      +  W  L  A   H N+ L +
Sbjct: 669 DYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAK 728

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L++ +      YVL+SN +A  G WE    +R L+K   V K PG SWI
Sbjct: 729 VASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWI 782



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 204/400 (51%), Gaps = 7/400 (1%)

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           LL  G+Q+H+ V  +  S        ++ MY  CG+  +  K+F      +     +N +
Sbjct: 46  LLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSI 105

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--VGYQVHAQAMKS-GF 319
           +     +G + +AL  +  ML   + P   TF  ++ AC+  +   G +  +  + S G 
Sbjct: 106 ISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGM 165

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +    V+++ I  Y   GKID A  +F R+ +KD V WN M++ YA+     S I  +  
Sbjct: 166 DCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSL 225

Query: 380 MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+   I P+  TF  +L   AS   I++   +H  V ++G+     + N+L+S Y+K  R
Sbjct: 226 MRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGR 285

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
              A ++F  MS  + +TWN +I+G++ +G   + L  F E++ S + PD  T S  L S
Sbjct: 286 FDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPS 345

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            ++  +L + +QIH Y++++++   + L +A+I  Y KC  +  + ++F+     D + +
Sbjct: 346 VSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVF 405

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            A+IS Y  +G   +A+  F+ +  V +I P++ T  ++L
Sbjct: 406 TAMISGYLHNGLNIDALEMFRWLVKV-KISPNEITLVSIL 444



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMM 548
           LS+ L  C+ ++ LR GKQ+H +V+ N +         ++ +YA CG   +C    + + 
Sbjct: 34  LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93

Query: 549 IEKDTI-SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               +I  WN++IS++ + G   +A++ +  M   G + PD +TF  ++ AC
Sbjct: 94  SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFG-VSPDVSTFPCLVKAC 144


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 215/708 (30%), Positives = 376/708 (53%), Gaps = 43/708 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
            S++G +  AL  + ++  S K+ PD Y+  + + ACA L +A  G+ ++   L  G ++
Sbjct: 81  FSKNGWFPKALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFES 139

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             +V N ++ +Y                               ++MG +  A +VFD+MP
Sbjct: 140 DLYVGNALVDMY-------------------------------SRMGLLSRARQVFDEMP 168

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQ 209
            RDL  +N++I+G + +GY +  + ++ E+    +  D+++ +SVL +  +  +++ G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQG 228

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH    KSG + +  V N L+ MY       DA +VF+E    V D ++YN M+ G   +
Sbjct: 229 LHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEM--VVRDSVTYNTMICGYLKL 286

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
             VEE++  F + L    +P  LT  SV+ AC   R   +   ++   +++GF   ++V 
Sbjct: 287 EMVEESVKMFLENL-DQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVK 345

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I +Y+ CG +  A  +F  ++ KD VSWN++IS Y Q      A+  +  M  +  +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 387 PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D  T+  L++ S  +  ++    +H+    +GI  ++ VSNALI  YAK   +  + +I
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F++M   + +TWNT+I+  +  G    GLQ  +++  +++ PD  T  V L  CA +++ 
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK+IH  +L+    S++ +GNA+I +Y+KCG L+ S RVF  M  +D ++W  +I AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAY 585

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +GEG++A+  F  M+  G I PD   F A++ ACSH+GLV+ G   F+ M   Y   P
Sbjct: 586 GMYGEGEKALESFVDMEKSG-IVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDP 644

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLL R+  + +AE  I +  I+  +  W ++  AC   G++     ++  +
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRI 704

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +E   D P   +L SN YAA   W++ + IR+ ++   + K PG SWI
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWI 752



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 154/581 (26%), Positives = 294/581 (50%), Gaps = 22/581 (3%)

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL--EFG 207
           P +++ ++N++I   ++NG+    +  + ++ +  V  D Y+F SV+  C AGL   E G
Sbjct: 67  PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC-AGLFDAEMG 125

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
             ++  + + GF   + V NAL+ MY   G +  A +VF+E    V D +S+N ++ G +
Sbjct: 126 DLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMP--VRDLVSWNSLISGYS 183

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTS 324
           S G  EEAL  + ++  + + P   T  SV+ A    L  + G  +H   +KSG  + + 
Sbjct: 184 SHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSV 243

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V+N  + MY    +  +A  +F  +  +D V++NTMI  Y +  +   ++  +LE     
Sbjct: 244 VNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLD-Q 302

Query: 385 IRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
            +PD  T  S+L + G +    + + I+ ++   G +    V N LI  YAK   +  A 
Sbjct: 303 FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITAR 362

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F++M  ++ ++WN++I+G++ +G  ++ ++ F  +++ E + D  T  + +S   R++
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLA 422

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L+ GK +H   +K+ +   +S+ NA+I +YAKCG++  SL++FN M   DT++WN +IS
Sbjct: 423 DLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVIS 482

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A  + G+    +     M+   ++ PD ATF   L  C+       G  I   ++  +G+
Sbjct: 483 ACVRFGDFATGLQVTTQMRK-NKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGY 540

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRII 679
                  + ++++  + G L+ + RV       +R D   W  +  A   +G      + 
Sbjct: 541 ESELQIGNALIEMYSKCGCLESSFRVFER---MSRRDVVTWTGMIYAYGMYGEGEKA-LE 596

Query: 680 AGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
           + + +E+    P   V ++ IYA   +GL E+     E +K
Sbjct: 597 SFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMK 637



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 142/587 (24%), Positives = 257/587 (43%), Gaps = 104/587 (17%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S  G+Y++AL ++ ++ +S  + PD +++S+ L A ANL     G  LH
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELRNSW-IVPDSFTVSSVLPAFANLLVVKQGQGLH 230

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ--------------------- 119
            + L++G+ +   V N +L++Y         +RVF E+                      
Sbjct: 231 GFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVE 290

Query: 120 -------------NPDVYSWTTFLSAC--------------------------------- 133
                         PD+ + T+ L AC                                 
Sbjct: 291 ESVKMFLENLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILID 350

Query: 134 --TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
              K G +  A +VF+ M  +D   +N++I+G  ++G     + LF+ M  ++ + D+ +
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410

Query: 192 FASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +  ++S+      L+FG+ LHS   KSG    +SV NALI MY  CG V D+ K+F    
Sbjct: 411 YLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
               D +++N ++      G     L     M    + P   TF+  +  C      R+G
Sbjct: 471 --TLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLG 528

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            ++H   ++ G+E+   + NA I MYS CG ++ +  +F R+  +D+V+W  MI  Y   
Sbjct: 529 KEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMY 588

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM----VEMIHAFVFINGIITN 420
             G  A+ ++++M+  GI PD   F +L+   + SG +E      E +     I+ +I +
Sbjct: 589 GEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEH 648

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
                 L+S   ++++I +A +    M   P   I W +++     +G  ++  +  S  
Sbjct: 649 YACVVDLLS---RSQKISKAEEFIQAMPIEPDASI-WASVLRACRTSG-DMETAERVSRR 703

Query: 479 LMSELRPDEYTLSV-------ALSSCARISSLR------HGKQIHGY 512
           ++ EL PD+   S+       AL    ++S +R      H K+  GY
Sbjct: 704 II-ELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGY 749



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 117/214 (54%), Gaps = 2/214 (0%)

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIIT 454
           L+SS  +  +  IHA V   G+  +   S  LI  Y+       +  +F  +SP +N+  
Sbjct: 14  LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYI 73

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN++I  F  NG+  + L+ + +L  S++ PD+YT    + +CA +     G  ++  +L
Sbjct: 74  WNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQIL 133

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           +    S + +GNA++ +Y++ G L  + +VF+ M  +D +SWN+LIS Y+ HG  +EA+ 
Sbjct: 134 EMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            +  +++   I PD  T ++VL A ++  +V  G
Sbjct: 194 IYHELRN-SWIVPDSFTVSSVLPAFANLLVVKQG 226


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 362/720 (50%), Gaps = 55/720 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  +++ SR+  Y + L +F+++ S   L PD ++    + ACA + +   G  +H
Sbjct: 151 LFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVH 210

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ GL     V N ++S Y                                  G V 
Sbjct: 211 GLVVKTGLVEDLFVGNALVSFYGTH-------------------------------GFVS 239

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A ++FD MP+R+L  +N+MI   ++NG +    G F          D  +  +VL VC 
Sbjct: 240 DALKLFDIMPERNLVSWNSMIRVFSDNGDD----GAFMP--------DVATVVTVLPVCA 287

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               +  G+ +H    K      + V NAL+ MY   G ++D+  +F+       + +S+
Sbjct: 288 REREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNK--NVVSW 345

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACLCPRVG---YQVHAQA 314
           N M+ G ++ G +       R ML  S  ++  E+T ++ +  C    V     ++H  +
Sbjct: 346 NTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYS 405

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K  F     ++NA +  Y+ CG +  A  +F  ++ K + SWN +I  YAQ +  R ++
Sbjct: 406 LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSL 465

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAY 431
            A+L+M++ G+ PD FT  SLL++   ++ + +   +H F+  N +  ++ V  +++S Y
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 525

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
                +     +F  M   ++++WNT+I G L NGFP + L  F ++++  ++P   ++ 
Sbjct: 526 IHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMM 585

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
               +C+ + SLR G++ H Y LK+ L     +  ++I +YAK G +  S +VFN + EK
Sbjct: 586 TVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEK 645

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              SWNA+I  Y  HG  KEA+  F+ MQ  GR  PD  TF  VL+AC+H+GL+ +G R 
Sbjct: 646 SAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGR-NPDDLTFLGVLTACNHSGLLHEGLRY 704

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            D M + +G  P   H +C++D+LGRAG LD A RV      +     W +L S C  H 
Sbjct: 705 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQ 764

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           NL +G  +A  L   E +KP  YVLLSN+YA  G W++   +R+ +K   + K  GCSWI
Sbjct: 765 NLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWI 824



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 268/554 (48%), Gaps = 39/554 (7%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSFASV 195
           G  D +   FD +  ++L  +NA+I+  + N  Y ++     + + K  +  DN++F  V
Sbjct: 134 GSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCV 193

Query: 196 LSVCDAGLLEFGRQL--HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +  C AG+ + G  L  H LV K+G    + V NAL++ Y   G V DA K+F+      
Sbjct: 194 IKAC-AGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPER- 251

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + +S+N M+   +  G               +  P   T V+V+  C   R   VG  V
Sbjct: 252 -NLVSWNSMIRVFSDNGD------------DGAFMPDVATVVTVLPVCAREREIGVGKGV 298

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN-- 368
           H  A+K   +    V+NA + MYS  G I ++ MIF     K++VSWNTM+  ++     
Sbjct: 299 HGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDI 358

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSN 425
            G   +L  +   S  ++ DE T  + +        +  ++ +H +      + +  ++N
Sbjct: 359 HGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLAN 418

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           A +++YAK   +  A ++FH +  + + +WN LI G+  +  P   L    ++  S L P
Sbjct: 419 AFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLP 478

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV- 544
           D +T+   LS+C+++ SLR GK++HG++++N L   + +  ++++LY  CG+L C+++V 
Sbjct: 479 DNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL-CTVQVL 537

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M +   +SWN +I+ + Q+G  + A+  F+ M   G I+P   +   V  ACS    
Sbjct: 538 FDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYG-IQPCGISMMTVFGACSLLPS 596

Query: 605 VDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           +  G          ++ D  FI        ++D+  + G + ++ +V N    +  + +W
Sbjct: 597 LRLGREAHAYALKHLLEDNAFIACS-----IIDMYAKNGAITQSSKVFNGLK-EKSAASW 650

Query: 661 WALFSACAAHGNLR 674
            A+      HG  +
Sbjct: 651 NAMIMGYGMHGRAK 664



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 196/409 (47%), Gaps = 29/409 (7%)

Query: 204 LEFGRQLHSLVTKSGFSCLVS---VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +E GR++H LV  SG + L S   +   +ITMY  CG+  D+   F+  +    +   +N
Sbjct: 100 IEMGRKIHHLV--SGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK--NLFQWN 155

Query: 261 VMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
            ++   +      E L  F  M+  + L P   TF  V+ AC       +G  VH   +K
Sbjct: 156 AVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVK 215

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G      V NA ++ Y + G + +A  +F  + E+++VSWN+MI  ++  N    A + 
Sbjct: 216 TGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSD-NGDDGAFM- 273

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
                     PD  T  ++L   A    I + + +H +     +   + V+NAL+  Y+K
Sbjct: 274 ----------PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSK 323

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM--SELRPDEYTLS 491
              I  +  IF   + +N+++WNT++ GF   G          ++L    +++ DE T+ 
Sbjct: 324 WGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTIL 383

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
            A+  C   S L   K++H Y LK   +    L NA +  YAKCG L  + RVF+ +  K
Sbjct: 384 NAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSK 443

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
              SWNALI  YAQ  + + ++     M++ G + PD  T  ++LSACS
Sbjct: 444 TLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLL-PDNFTVCSLLSACS 491



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 18/214 (8%)

Query: 392 FGSLLASSGF---IEMVEMIHAFVFINGIITNIQV-SNALISAYAKNERIKQAYQIFHNM 447
            G LL +SG    IEM   IH  V  +  + +  V    +I+ YA       +   F  +
Sbjct: 87  LGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDAL 146

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHG 506
             +N+  WN +I+ +  N    + L+ F +++  + L PD +T    + +CA IS +  G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIG 206

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
             +HG V+K  L+  + +GNA+++ Y   G +  +L++F++M E++ +SWN++I  ++ +
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDN 266

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           G             D G   PD AT   VL  C+
Sbjct: 267 G-------------DDGAFMPDVATVVTVLPVCA 287



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 3/120 (2%)

Query: 490 LSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           L + L +  +   +  G++IH  V     L S   L   +IT+YA CG  D S   F+ +
Sbjct: 87  LGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDAL 146

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             K+   WNA+IS+Y+++    E +  F  M     + PD  TF  V+ AC  AG+ D G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC--AGISDVG 204


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 354/697 (50%), Gaps = 72/697 (10%)

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT------FLSACTKMGHVDYAC 143
           A P  A +  +L    R L +V+ +       D+    T       L+A  + G +  A 
Sbjct: 59  ALPPAAKSAAAL----RSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAAL 114

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRD---------NYSFA 193
            +FD MP RD   +N++I            + LFR  +  LD  RD         +++  
Sbjct: 115 ALFDAMPSRDAVTFNSLIAA----------LCLFRRWLPALDALRDMLLEGHPLTSFTLV 164

Query: 194 SVLSVCD--AGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVF--- 246
           SVL  C   A  L  GR+ H+   K+GF         NAL++MY   G V DA  +F   
Sbjct: 165 SVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSV 224

Query: 247 ---EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
              +   G V   +++N M+  L   GR  EA+    DM+   +RP  +TF S + AC  
Sbjct: 225 GATDVPGGGV---VTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQ 281

Query: 303 --CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQ--EKDIVSW 357
                +G ++HA  +K     A + V++A + MY+S  ++  A ++F  +   E+ +  W
Sbjct: 282 LEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLW 341

Query: 358 NTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           N MI  YAQ  L   A+  +  M++  G+ P E T   +L S    E     E +H +V 
Sbjct: 342 NAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVV 401

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G+  N  V NAL+  YA+   +  A  IF  + PR++++WNTLI G ++ G      Q
Sbjct: 402 KRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ 461

Query: 474 HFSELLM------------------SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
              E+                      + P+  TL   L  CA +++   GK+IHGY ++
Sbjct: 462 LVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVR 521

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           + L S +++G+A++ +YAKCG L  S  VF+ +  ++ I+WN LI AY  HG G EA++ 
Sbjct: 522 HALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIAL 581

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M      KP++ TF A L+ACSH+G+VD G  +F SM  ++G  P  D  +C +D+L
Sbjct: 582 FDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDIL 641

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALF-SACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           GRAG LDEA R+I+S     +  + W+ F  AC  H N+ LG I A  L E E D+ S Y
Sbjct: 642 GRAGRLDEAYRIISSMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHY 701

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           VLL NIY+AAGLWE+++ +R  +++ GV K+PGCSWI
Sbjct: 702 VLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWI 738



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 227/516 (43%), Gaps = 69/516 (13%)

Query: 12  GNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR 71
           G ++     ++  N  ++ L +SG   +A+ +   +  +  ++PD  + ++ L AC+ L 
Sbjct: 225 GATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDM-VARGVRPDGVTFASALPACSQLE 283

Query: 72  NAAFGNQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
             + G ++HAY L+ A L A   VA+ ++ +Y +  + V   R+                
Sbjct: 284 MLSLGREMHAYVLKDADLAANSFVASALVDMYAS-HERVGAARL---------------- 326

Query: 131 SACTKMGHVDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRR 187
                         VFD +P  +R L ++NAMI G  + G ++  + LF  M  +  V  
Sbjct: 327 --------------VFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVP 372

Query: 188 DNYSFASVLSVCDAGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
              + A VL  C       G++ +H  V K G +    V NAL+ +Y   G++  A  +F
Sbjct: 373 SETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIF 432

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV------------------ASLR 288
              +    D +S+N ++ G    G + +A    R+M                      + 
Sbjct: 433 ATIEPR--DVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADEEPVV 490

Query: 289 PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+ +T ++++  C     P  G ++H  A++   ++  +V +A + MY+ CG +  +  +
Sbjct: 491 PNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRAV 550

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS---SGF 401
           F RL  +++++WN +I  Y    LG  AI  +  M  S   +P+E TF + LA+   SG 
Sbjct: 551 FDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACSHSGM 610

Query: 402 IEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTL 458
           ++  +EM  +    +G+     +    +    +  R+ +AY+I  +M P  + +  W++ 
Sbjct: 611 VDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSAWSSF 670

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           +    L+     G      L   EL PDE +  V L
Sbjct: 671 LGACRLHRNVALGEIAAERLF--ELEPDEASHYVLL 704


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 221/682 (32%), Positives = 345/682 (50%), Gaps = 45/682 (6%)

Query: 67  CANLRN-AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE------IQ 119
           C + RN  +  N   A +    L A  H  +++L  Y   R L   K +         + 
Sbjct: 53  CGDFRNNLSNSNTTKALSKSKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLH 112

Query: 120 NPDVYSWTTFLSACTKM-GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           +P+     + L+      G V  A ++FD + D  L ++NA+I    + G+    + +F 
Sbjct: 113 SPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFD 172

Query: 179 EMH-KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
            M        D Y+F  V+  C    +L  G  +H     SGFS  + V N+L+ MY NC
Sbjct: 173 SMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNC 232

Query: 237 GNVVDACKVFEEA-KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           G V  A +VF    K  V   +S+N M+ G    GR EEAL  F  M+ A + P   T V
Sbjct: 233 GKVGLARQVFNVMLKRSV---VSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIV 289

Query: 296 SVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S + +C   +   +G +VH    K+  +    V NA + MYS CG IDEA ++FA  +EK
Sbjct: 290 SALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEK 349

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFV 412
           D+++W +MI+ Y      +SA+     MQ  G+ P+  T  SLL++              
Sbjct: 350 DVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACA------------ 397

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
                        +L   YAK   +  ++Q+F   S +  + WN L++G + N    + +
Sbjct: 398 -------------SLCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAV 444

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F  +L+ E+  +  T +  + + A ++ L+    +H Y++++  ISK+++   +I +Y
Sbjct: 445 GLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMY 504

Query: 533 AKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +KCG LD + ++F+ +   EKD I W+ LI+ Y  HG G+ AV  F  M   G ++P++ 
Sbjct: 505 SKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSG-MQPNEI 563

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT+VL ACSH GLVDDG  +F  M+ +Y   P  +H +C++DLLGRAG LDEA  +I S
Sbjct: 564 TFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKS 623

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              Q     W AL  AC  H N+ LG + A  L E E +    Y+LL+NIYAA G W++A
Sbjct: 624 MPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDA 683

Query: 711 ANIRELLKRTGVIKQPGCSWIG 732
            N+R ++ + G+ K P  S +G
Sbjct: 684 ENVRHIMSKIGLRKTPAQSSVG 705



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 133/542 (24%), Positives = 239/542 (44%), Gaps = 70/542 (12%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G + DAL +F  +  S K  PD Y+    + AC+ +     G  +H  AL +G  +   V
Sbjct: 162 GFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFV 221

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N++L++Y N   +   ++VF+ +    V SW T +S                       
Sbjct: 222 QNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMIS----------------------- 258

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSL 213
                   G  +NG  +  + +F  M    V  D+ +  S L  C     LE G ++H L
Sbjct: 259 --------GWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKL 310

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K+     + V NAL+ MY  CG + +A  VF E K    D I++  M++G    G  +
Sbjct: 311 VQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEK--DVITWTSMINGYIMNGNAK 368

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC--LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            AL     M +  + P+ +T  S++SAC  LC                            
Sbjct: 369 SALALCPAMQLDGVVPNAVTLASLLSACASLC---------------------------Y 401

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ C  +  +  +FA+  +K  V WN ++S      L R A+  +  M    +  +  T
Sbjct: 402 MYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHAT 461

Query: 392 FGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM- 447
           F S++ +      ++ V  +H+++  +G I+ I V   LI  Y+K   +  A++IF  + 
Sbjct: 462 FNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIP 521

Query: 448 -SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
              ++II W+ LI G+ ++G     +  F++++ S ++P+E T +  L +C+    +  G
Sbjct: 522 NKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDG 581

Query: 507 KQIHGYVLKNNLISKM-SLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYA 564
             +  Y+++N   S + +    ++ L  + G LD +  +  +M  +++   W AL+ A  
Sbjct: 582 LTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACL 641

Query: 565 QH 566
            H
Sbjct: 642 IH 643



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 46/328 (14%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  ++   ++G  ++AL +F  +  + +++PD  ++ + L +C  L+    G 
Sbjct: 247 KRSVVSWNTMISGWFQNGRPEEALAVFNSMMDA-RVEPDSATIVSALPSCGYLKELELGI 305

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT---------- 127
           ++H    +  L+    V N ++ +Y     +     VF+E +  DV +WT          
Sbjct: 306 KVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNG 365

Query: 128 -------------------------TFLSAC-------TKMGHVDYACEVFDKMPDRDLP 155
                                    + LSAC        K   V Y+ +VF K   +   
Sbjct: 366 NAKSALALCPAMQLDGVVPNAVTLASLLSACASLCYMYAKCNAVSYSFQVFAKTSKKRTV 425

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR--QLHSL 213
            +NA+++G   N      +GLF+ M   +V  ++ +F SV+    A L +  +   LHS 
Sbjct: 426 PWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAY-AILADLKQVMNLHSY 484

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           + +SGF   ++V+  LI MY  CG++  A K+F+E      D I ++V++ G    G  E
Sbjct: 485 LVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC 301
            A++ F  M+ + ++P+E+TF SV+ AC
Sbjct: 545 TAVLLFNQMVHSGMQPNEITFTSVLHAC 572



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 81/173 (46%), Gaps = 7/173 (4%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           + TSK+  +  N  L+ L  +   ++A+ LF  +    +++ +  + ++ + A A L + 
Sbjct: 417 AKTSKKRTVPWNALLSGLIHNELAREAVGLFKSM-LIEEVEANHATFNSVIPAYAILADL 475

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN--PDVYSWTTFLS 131
                LH+Y +R+G  +   V   ++ +Y     L    ++F EI N   D+  W+  ++
Sbjct: 476 KQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIA 535

Query: 132 ACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
                GH + A  +F++M    +      + +++  C+  G  D G+ LF+ M
Sbjct: 536 GYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYM 588


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 216/617 (35%), Positives = 333/617 (53%), Gaps = 10/617 (1%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+++    L+   K   +  A ++FD+MPDR+   +  +I G ++       IGLF  + 
Sbjct: 78  DLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQ 137

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 + + F++VL +   A   + G  +H+ V K GF     V  ALI  Y  CG   
Sbjct: 138 GEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAE 197

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A +VF+  +    D +S+  M+         EE+L  F  M +   +P+  TF SV+ A
Sbjct: 198 CARQVFDAIEYK--DMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKA 255

Query: 301 CL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C+      VG  VH  A K+ +     V    I +Y   G +D+A  +F  + + D++ W
Sbjct: 256 CVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPW 315

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFI 414
           + MI+ YAQ      AI  +  M+   + P++FT  SLL   AS   +++   IH  V  
Sbjct: 316 SFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVK 375

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G+  N+ VSNAL+  YAK  R++ + Q+F        ++WNT+I G++  G   + L  
Sbjct: 376 VGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALIL 435

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F ++L  +++  E T S  L +CA I++L  G QIH   +K        +GNA+I +YAK
Sbjct: 436 FKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAK 495

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG++  +  VF+M+ E D +SWNA+IS Y+ HG   EA+  F++M +    KPD+ TF  
Sbjct: 496 CGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLET-ECKPDKVTFVG 554

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           +LSACS+AGL+D G   F SMV +Y   P  +H +CM+ LLGR+G+LD+A ++++    +
Sbjct: 555 ILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFE 614

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
                W AL SAC  H ++ LGRI A  +LE E +  + +VLLSNIYA A  W   A+IR
Sbjct: 615 PSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIR 674

Query: 715 ELLKRTGVIKQPGCSWI 731
             +KR G+ K+PG SWI
Sbjct: 675 TSMKRKGIRKEPGLSWI 691



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 244/496 (49%), Gaps = 22/496 (4%)

Query: 188 DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           + Y + S+L  C   G    G+ LH  + K G    +   N L+  Y    ++ DA K+F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC--- 303
           +E      + +S+  ++ G +   R  EA+  F  +       +   F +V+   +    
Sbjct: 103 DEMPDR--NTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            ++G+ VHA   K GF++   V  A I  YS CG  + A  +F  ++ KD+VSW  M++ 
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN 420
           Y +      ++  +  M+ VG +P+ FTF S+L +   +E+  +   +H   F    +  
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V   LI  Y K+  +  A Q+F  M   ++I W+ +I  +  +    + ++ F  +  
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             + P+++TL+  L +CA +  L+ G QIH +V+K  L   + + NA++ +YAKCG ++ 
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMEN 400

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           SL++F+       +SWN +I  Y Q G G++A+  FK M +  +++  + T+++VL AC+
Sbjct: 401 SLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLEC-QVQGTEVTYSSVLRACA 459

Query: 601 HAGLVDDGTRIFD---SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN--SQHIQA 655
               ++ G++I       + D   +      + ++D+  + G + +A  V +   +H Q 
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVG----NALIDMYAKCGNIKDARLVFDMLREHDQV 515

Query: 656 RSDNWWALFSACAAHG 671
              +W A+ S  + HG
Sbjct: 516 ---SWNAMISGYSVHG 528



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 178/368 (48%), Gaps = 42/368 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           ++++L LF ++      KP+ ++ ++ L AC  L     G  +H  A +        V  
Sbjct: 227 FEESLKLFSRMRIV-GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGV 285

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ LY  + D+    +VF E+   DV  W+                             
Sbjct: 286 ELIDLYIKSGDVDDALQVFEEMPKDDVIPWSF---------------------------- 317

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
              MI    ++   +  I +F  M +  V  + ++ AS+L  C + + L+ G Q+H  V 
Sbjct: 318 ---MIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G    V V NAL+ MY  CG + ++ ++F E+    C  +S+N ++ G    G  E+A
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPN--CTDVSWNTVIVGYVQAGNGEKA 432

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           LI F+DML   ++ +E+T+ SV+ AC     L P  G Q+H+ ++K+ ++  T V NA I
Sbjct: 433 LILFKDMLECQVQGTEVTYSSVLRACAGIAALEP--GSQIHSLSVKTIYDKNTVVGNALI 490

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG I +A ++F  L+E D VSWN MIS Y+   L   A+  +  M     +PD+ 
Sbjct: 491 DMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKV 550

Query: 391 TFGSLLAS 398
           TF  +L++
Sbjct: 551 TFVGILSA 558



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 176/376 (46%), Gaps = 49/376 (13%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ ++  +  +A  ++S   ++A+ +F ++     L P+ ++L++ L ACA+L +   GN
Sbjct: 309 KDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVL-PNQFTLASLLQACASLVDLQLGN 367

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+H + ++ GL     V+N ++ +Y     + +  ++FSE  N    SW           
Sbjct: 368 QIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSW----------- 416

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                               N +I G  + G  +  + LF++M +  V+    +++SVL 
Sbjct: 417 --------------------NTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLR 456

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C AG+  LE G Q+HSL  K+ +     V NALI MY  CGN+ DA  VF+  + +  D
Sbjct: 457 AC-AGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREH--D 513

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQA- 314
            +S+N M+ G +  G   EAL  F  ML    +P ++TFV ++SA  C   G     QA 
Sbjct: 514 QVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSA--CSNAGLLDRGQAY 571

Query: 315 MKSGFEAYTSVSNAA-----ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
            KS  E Y     A      + +    G +D+A  +   +  E  ++ W  ++S     N
Sbjct: 572 FKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHN 631

Query: 369 ---LGRSAILAYLEMQ 381
              LGR +    LE++
Sbjct: 632 DVELGRISAQRVLEIE 647


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 315/579 (54%), Gaps = 10/579 (1%)

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           M+ G  ++   D  +  F  M    VR   Y+F  +L +C D   L+ G+++H  V  SG
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           FS  +  +  ++ MY  C  + DA  +F+       D + +N M+ G A  G  + AL+ 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER--DLVCWNTMISGYAQNGFAKVALML 118

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
              M     RP  +T VS++ A    R   +G  VH   +++GFE+  +VS A + MYS 
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT-FGS 394
           CG +  A +IF  +  + +VSWN+MI  Y Q      A+L + +M   G++P   T  G+
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 395 LLASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L A +  G +E  + +H  V    + +++ V N+LIS Y+K +R+  A  IF N+  + +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++WN +I G+  NG   + L  F E+    ++PD +T+   + + A +S  R  K IHG 
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           V++  L   + +  A++ +YAKCG +  + ++F+MM  +  I+WNA+I  Y  HG GK +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           V  FK M+  G IKP+  TF   LSACSH+GLV++G   F+SM  DYG  P  DH   M+
Sbjct: 419 VELFKEMKK-GTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMV 477

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGRAG L++A   I    I+     + A+  AC  H N+ LG   A  + +   D   
Sbjct: 478 DLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGG 537

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +VLL+NIYA A +W + A +R +++++G+ K PGCS +
Sbjct: 538 YHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLV 576



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 274/583 (46%), Gaps = 54/583 (9%)

Query: 28  LANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           L   ++S     AL  F ++ H S  ++P +Y+ +  L  C +  +   G ++H   + +
Sbjct: 2   LKGYAKSSSLDSALSFFSRMKHDS--VRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITS 59

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G          ++++Y   R            Q  D Y+                   +F
Sbjct: 60  GFSWNLFAMTGVVNMYAKCR------------QINDAYN-------------------MF 88

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLE 205
           D+MP+RDL  +N MI+G  +NG+  + + L   M +   R D+ +  S+L +V D  LL 
Sbjct: 89  DRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLR 148

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH---ISYNVM 262
            G  +H  V ++GF  LV+V  AL+ MY  CG+V  A  +F+       DH   +S+N M
Sbjct: 149 IGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGM-----DHRTVVSWNSM 203

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           +DG    G  E A++ F+ ML   ++P+ +T +  + AC        G  VH    +   
Sbjct: 204 IDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKL 263

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           ++  SV N+ I+MYS C ++D A  IF  L+ K +VSWN MI  YAQ      A+ A+ E
Sbjct: 264 DSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCE 323

Query: 380 MQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           MQS  I+PD FT  S+   LA        + IH  V    +  N+ V  AL+  YAK   
Sbjct: 324 MQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGA 383

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I  A ++F  M+ R++ITWN +I+G+  +G     ++ F E+    ++P++ T   ALS+
Sbjct: 384 IHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSA 443

Query: 497 CARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           C+    +  G      + K+  I   M    AM+ L  + G L+ +      M  K  I+
Sbjct: 444 CSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503

Query: 556 -WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            + A++ A   H   K      KA  ++ ++ PD   +  +L+
Sbjct: 504 VYGAMLGACKIH---KNVDLGEKAAFEIFKLNPDDGGYHVLLA 543



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 202/444 (45%), Gaps = 46/444 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  +++G  + AL L +++ S    +PD  ++ + L A A+ R    G  +H
Sbjct: 96  LVCWNTMISGYAQNGFAKVALMLVLRM-SEEGHRPDSITIVSILPAVADTRLLRIGMAVH 154

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y LRAG ++  +V+  ++ +Y                               +K G V 
Sbjct: 155 GYVLRAGFESLVNVSTALVDMY-------------------------------SKCGSVS 183

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  +FD M  R +  +N+MI G  ++G  +  + +F++M    V+  N +    L  C 
Sbjct: 184 IARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACA 243

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D G LE G+ +H LV +      VSV+N+LI+MY  C  V  A  +F+  +      +S+
Sbjct: 244 DLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL--VSW 301

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK 316
           N M+ G A  G V EAL  F +M   +++P   T VSV+ A      PR    +H   ++
Sbjct: 302 NAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIR 361

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              +    V  A + MY+ CG I  A  +F  +  + +++WN MI  Y    LG++++  
Sbjct: 362 RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVEL 421

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVSNALISA 430
           + EM+   I+P++ TF   L++     +VE      F        GI   +    A++  
Sbjct: 422 FKEMKKGTIKPNDITFLCALSACSHSGLVE--EGLCFFESMKKDYGIEPTMDHYGAMVDL 479

Query: 431 YAKNERIKQAYQIFHNMSPRNIIT 454
             +  R+ QA+     M  +  IT
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGIT 503


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 236/734 (32%), Positives = 377/734 (51%), Gaps = 65/734 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  SR G++  A  LF Q      L+P+ +SL++ L    +        QLH +++R G
Sbjct: 93  IAAYSRCGNFAQAFGLF-QKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTG 151

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACTKMGHVDYACEV 145
                 +    +++Y     L   +RVF E  +   D+  W + ++A     ++ + C V
Sbjct: 152 FGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAA-----YIFHGCWV 206

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
                   L ++  M++         +G+          V     ++ASV++ C  +G  
Sbjct: 207 ------EVLRLFCKMVS---------VGV----------VAPTELTYASVVNACGSSGEE 241

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           ++G  +H  + K+G     ++ N+L+T Y  CGN+  A ++FE       D +S+N M+ 
Sbjct: 242 KYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRK--DVVSWNAMIA 298

Query: 265 GLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
                G  E AL  FR ML     ++P+ +TF+S++SA       R G ++HA   +   
Sbjct: 299 ANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSL 358

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E  TS++N+ IT YS C ++ +A  IF RL  +DI+SWN+M++ Y Q          +  
Sbjct: 359 EVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKR 418

Query: 380 MQSVGIRPDEFTFGSLL-----ASSGFI--EMVEMIHAFVF--INGIITNIQVSNALISA 430
           M   GI PD  +   +       SSG I     + IH ++   I     ++ VSNA++  
Sbjct: 419 MMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKM 478

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK  RI  A +IF  M  R+  +WN +++G+  N      L  F ++L      D  +L
Sbjct: 479 YAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSL 538

Query: 491 SVALSSCARISSLRHGKQIHGYVLK-------NNLISKMSLGNAMITLYAKCGDLDCSLR 543
           S+ L+SC R+ SL+ GKQ H  V K        +  S +S+ NA+I++Y+KCG +  + +
Sbjct: 539 SILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQ 598

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  M  KD  SW A+I+  A HG   EA+  F+ M+  G IKP+Q TF A+L AC+H G
Sbjct: 599 VFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDG-IKPNQVTFLALLMACAHGG 657

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQARSDN-- 659
           LV +G+  FDSM NDYG  P+ +H +CM+DL GR+G  D A+ ++       +   D+  
Sbjct: 658 LVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDIL 717

Query: 660 --WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W  L  AC A   L LG   A  +LE E +  + Y+LL+N+YA++GLWE+A  +R+ +
Sbjct: 718 NLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAM 777

Query: 718 KRTGVIKQPGCSWI 731
           +  G+ K+ GCSWI
Sbjct: 778 RDKGLRKEVGCSWI 791



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 185/632 (29%), Positives = 319/632 (50%), Gaps = 46/632 (7%)

Query: 117 EIQNPDVYSWTTF-LSACTKM-----GHVDYAC--EVFDKMPDRDLPVYNAMITGCTENG 168
           E QN    S   F  SAC+K       H    C  ++FD  P+RD+  ++A+I   +  G
Sbjct: 41  EFQNHGFSSQFIFRCSACSKFLVSQSEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCG 100

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVN 227
                 GLF++M    ++ + +S AS+L V C  G +   RQLH    ++GF     +  
Sbjct: 101 NFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRA 160

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VAS 286
           A ITMY  CG + DA +VF+E      D + +N ++      G   E L  F  M+ V  
Sbjct: 161 AWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGV 220

Query: 287 LRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           + P+ELT+ SV++AC      + G  VH + +K+G EA T++ N+ +T Y  CG +  A 
Sbjct: 221 VAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHAS 279

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLL-ASSG 400
            +F R+  KD+VSWN MI+   QR  G +A+  +  M  V   ++P+  TF SLL A SG
Sbjct: 280 QLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSG 339

Query: 401 F--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
              +     IHA +F   +  +  ++N+LI+ Y+K   + +A +IF  +  R+II+WN++
Sbjct: 340 LSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSM 399

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS----LRHGKQIHGYVL 514
           + G+  N    +    F  +++S + PD ++L++  ++ +R SS     R GK+IHGY+L
Sbjct: 400 LAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYIL 459

Query: 515 KNNLISKMSL--GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           +      +SL   NA++ +YAK   +  + ++F  M  +D+ SWNA++  Y+++ + ++ 
Sbjct: 460 RRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDV 519

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF--IPAEDHL-- 628
           +  F  +   G    D  + + +L++C     +  G +    +   +     P +D L  
Sbjct: 520 LMIFLDILKQG-FPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLS 578

Query: 629 --SCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLL 684
             + ++ +  + G + +A +V        R D  +W A+ + CA HG      + A  L 
Sbjct: 579 INNALISMYSKCGSIKDAAQVFLKME---RKDVFSWTAMITGCAHHGLA----VEALQLF 631

Query: 685 EREQD---KPSVYVLLSNIYAAA--GLWEEAA 711
           ER +    KP+    L+ + A A  GL +E +
Sbjct: 632 ERMKTDGIKPNQVTFLALLMACAHGGLVQEGS 663



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 187/400 (46%), Gaps = 55/400 (13%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           S++ ++  N  +A   + G  ++AL LF + +     ++P+  +  + L+A + L     
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++HA+  R  L+    + N++++ Y   R++   + +F  +   D+ SW +       
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNS------- 398

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                   M+ G  +N  +     +F+ M    +  D++S   +
Sbjct: 399 ------------------------MLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTII 434

Query: 196 LSVC---DAGLLEF--GRQLHSL----VTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            +      +GL+ F  G+++H      +T  G S  +SV NA++ MY     + DA K+F
Sbjct: 435 FNAASRDSSGLIYFRRGKEIHGYILRRITPGGVS--LSVSNAILKMYAKFNRIADAEKIF 492

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LC 303
           +  K    D  S+N MMDG +   + E+ L+ F D+L        ++   ++++C   + 
Sbjct: 493 KGMKNR--DSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVS 550

Query: 304 PRVGYQVHAQAMK-------SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            ++G Q HA   K          ++  S++NA I+MYS CG I +A  +F +++ KD+ S
Sbjct: 551 LQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFS 610

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           W  MI+  A   L   A+  +  M++ GI+P++ TF +LL
Sbjct: 611 WTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALL 650



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 12/168 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+  ++D L +F+ I        D  SLS  L +C  L +   G Q HA   
Sbjct: 504 NAMMDGYSRNAKFEDVLMIFLDI-LKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVA 562

Query: 85  RA-GLKAYPH------VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +    +  PH      + N ++S+Y     +    +VF +++  DV+SWT  ++ C   G
Sbjct: 563 KLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHG 622

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMH 181
               A ++F++M    +      + A++  C   G    G   F  M+
Sbjct: 623 LAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMY 670


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 230/717 (32%), Positives = 379/717 (52%), Gaps = 46/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  ++ G  ++A+  F+++  +  LK    SL + L+A A+L    +G+ +HA A 
Sbjct: 278 NVMISGHAKRGFAEEAISFFLELKKT-GLKATRSSLGSVLSAIASLSMLNYGSMVHAQAT 336

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL    +V + ++++Y                            + C+KM   D A +
Sbjct: 337 KEGLDDNVYVGSALVNMY----------------------------AKCSKM---DAAKQ 365

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VF+ + +R++ ++NAM+ G  +NG     +  F  M +   + D ++F S+ S C +   
Sbjct: 366 VFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHY 425

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L FG QLH+++ K+ F+  + V NAL+ MY   G + +A K FE  K  + D++S+N ++
Sbjct: 426 LNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMK--IHDNVSWNAII 483

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
            G       +EA   FR M+   + P E++  S++SAC      + G Q H   +K G +
Sbjct: 484 VGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLD 543

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             T   ++ I MY  CG +  A  +F  +  +++VS N +I+ Y   +L   AI  + E+
Sbjct: 544 TSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHL-EEAIHLFQEI 602

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ-VSNALISAYAKNER 436
           Q VG++P E TF  LL       M+ +   IH  V   G +++ + V  +L+  Y  ++R
Sbjct: 603 QMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQR 662

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
              +  +F  +  P+ ++ W  LI+G+       + LQ +  +    + PD+   +  L 
Sbjct: 663 FVDSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLR 722

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD-TI 554
           +CA +SSL++G++IH  +            +++I +YAKCGD+  SL+VF  M  ++  I
Sbjct: 723 ACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVI 782

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I   A++G  +EA+  FK M+    I PD+ TF  VLSACSHAG V +G ++FD 
Sbjct: 783 SWNSMIVGLAKNGYAEEALEIFKQMEQ-QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDL 841

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MVN+Y   P  DHL CM+D+LGR G+L+EAE  IN    +A    W  L  AC  HG+  
Sbjct: 842 MVNNYKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEV 901

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+  A  L+E +    S YVLLS+IYA +  W  A ++R  +K  GV K PG SWI
Sbjct: 902 RGKRAADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWI 958



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 196/758 (25%), Positives = 331/758 (43%), Gaps = 89/758 (11%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           +H+++P+ ++ +  L+AC+ L++  FG Q+H    + G          ++ +Y   R L 
Sbjct: 135 NHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-------------------- 149
             + VF    N D  SWT  ++   + G    A +VFD+M                    
Sbjct: 195 DARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNAYV 254

Query: 150 ---------------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                          P+ ++  +N MI+G  + G+ +  I  F E+ K  ++    S  S
Sbjct: 255 ALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGS 314

Query: 195 VLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS +    +L +G  +H+  TK G    V V +AL+ MY  C  +  A +VF       
Sbjct: 315 VLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER- 373

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + + +N M+ G A  G  +E +  F  M     +P E TF S+ SAC        G Q+
Sbjct: 374 -NIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K+ F +   V+NA + MY+  G + EA   F  ++  D VSWN +I  Y Q    
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A   +  M S G+ PDE +  S++++   ++ +   +  H  +   G+ T+    ++L
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSL 552

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y K   +  A  +F++M  RN+++ N LI G+ + G   + +  F E+ M  L+P E
Sbjct: 553 IDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTE 611

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL-GNAMITLYAKCGDLDCSLRVFN 546
            T +  L  C     L  G+QIHG V+K   +S   +   +++ LY        S  +F+
Sbjct: 612 VTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFS 671

Query: 547 -MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
            +   K  + W ALIS YAQ    ++A+  ++ M+    I PDQA F +VL AC+    +
Sbjct: 672 ELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRS-DNILPDQAAFASVLRACAGMSSL 730

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDL------------------------------- 634
            +G  I  S++   GF   E   S ++D+                               
Sbjct: 731 QNGQEI-HSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIV 789

Query: 635 -LGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
            L + GY +EA  +   +  Q I      +  + SAC+  G +  GR +  L++   + +
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849

Query: 691 PSVYVL--LSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           P V  L  + +I    G   EA    E + + G    P
Sbjct: 850 PRVDHLGCMVDILGRWGFLNEA---EEFINKLGCKADP 884



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 247/482 (51%), Gaps = 41/482 (8%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G+VD+A + F ++  +D+  +N++++   ++G     +  F  M   +VR + ++FA
Sbjct: 87  VKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFA 146

Query: 194 SVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            VLS C +GL  + FGRQ+H  V K+GF         LI MY  C  + DA  VF+ A  
Sbjct: 147 MVLSAC-SGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALN 205

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              D +S+  ++ G    G   EA+  F  M      P ++T V+V++A           
Sbjct: 206 L--DTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA----------- 252

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                Y + G++ +A  +F ++   ++V+WN MIS +A+R    
Sbjct: 253 ---------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            AI  +LE++  G++    + GS+L++   + M+    M+HA     G+  N+ V +AL+
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK  ++  A Q+F+++  RNI+ WN ++ GF  NG   + ++ FS +     +PDE+
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T +   S+CA +  L  G Q+H  ++KN   S + + NA++ +YAK G L  + + F +M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D +SWNA+I  Y Q     EA   F+ M   G + PD+ +  +++SAC++   +  G
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNG-VLPDEVSLASIVSACANVQELKRG 530

Query: 609 TR 610
            +
Sbjct: 531 QQ 532



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/490 (25%), Positives = 220/490 (44%), Gaps = 55/490 (11%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   + +HS   K G      + N ++ +Y  CGNV  A K F   +    D  ++N ++
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKK--DVFAWNSVL 114

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
                 G     +  F  M    +RP+E TF  V+SAC   +    G QVH    K+GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             +      I MY+ C  + +A ++F      D VSW  +I+ Y +      A+  +  M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           Q VG  PD+ T            +V +++A+V +                     R+  A
Sbjct: 235 QRVGHAPDQIT------------LVTVVNAYVALG--------------------RLADA 262

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  +   N++ WN +I+G    GF  + +  F EL  + L+    +L   LS+ A +
Sbjct: 263 RKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASL 322

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S L +G  +H    K  L   + +G+A++ +YAKC  +D + +VFN + E++ + WNA++
Sbjct: 323 SMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAML 382

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             +AQ+G  +E +  F  M+  G  +PD+ TFT++ SAC+    ++ G ++   M+ +  
Sbjct: 383 GGFAQNGLAQEVMEFFSCMKRHGP-QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKN-K 440

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F       + ++D+  ++G L EA +                 F     H N+    II 
Sbjct: 441 FASNLFVANALVDMYAKSGALKEARK----------------QFELMKIHDNVSWNAIIV 484

Query: 681 GLLLEREQDK 690
           G + E   D+
Sbjct: 485 GYVQEEYNDE 494



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 12/327 (3%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   ++IH+     G+     + N ++  Y K   +  A + F  +  +++  WN++++ 
Sbjct: 57  LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +L +G     +Q F  +   E+RP+E+T ++ LS+C+ +  +  G+Q+H  V K     +
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
                 +I +YAKC  L  +  VF+  +  DT+SW ALI+ Y + G   EAV  F  MQ 
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           VG   PDQ T   V++A    G + D  ++F  + N     P     + M+    + G+ 
Sbjct: 237 VGH-APDQITLVTVVNAYVALGRLADARKLFTQIPN-----PNVVAWNVMISGHAKRGFA 290

Query: 642 DEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV--L 696
           +EA      +    ++A   +  ++ SA A+   L  G ++     +   D  +VYV   
Sbjct: 291 EEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDD-NVYVGSA 349

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVI 723
           L N+YA     + A  +   L    ++
Sbjct: 350 LVNMYAKCSKMDAAKQVFNSLGERNIV 376



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 65/301 (21%)

Query: 476 SELLMSELRPDEYTLSVALSSCARISS--------------LRHGKQIHGYVLKNNLISK 521
           ++ L+  L P    L + L  C RI +              L   K IH   LK  +  K
Sbjct: 16  NQQLVKNLNPHSEFLQICLQHCWRIQAHNLFDEKPKPVLQALSTAKVIHSKSLKIGVGLK 75

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             LGN ++ LY KCG++D + + F+ + +KD  +WN+++S Y  HG     V  F  M +
Sbjct: 76  GLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWN 135

Query: 582 VGRIKPDQATFTAVLSACS--------------------------HAGLVD--------- 606
              ++P++ TF  VLSACS                            GL+D         
Sbjct: 136 -HEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLR 194

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLG--RAGYLDEAERVINSQHIQARSDNWWALF 664
           D   +FD  +N        D +S    + G  R G+  EA +V +       + +   L 
Sbjct: 195 DARLVFDGALN-------LDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLV 247

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVY---VLLSNIYAAAGLWEEAANIRELLKRTG 721
           +   A+  + LGR+     L  +   P+V    V++S  +A  G  EEA +    LK+TG
Sbjct: 248 TVVNAY--VALGRLADARKLFTQIPNPNVVAWNVMISG-HAKRGFAEEAISFFLELKKTG 304

Query: 722 V 722
           +
Sbjct: 305 L 305


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 210/653 (32%), Positives = 337/653 (51%), Gaps = 104/653 (15%)

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +   + NP+ + +   ++A +K+G++ YA  VFDKMP  +   +N M++  +++G     
Sbjct: 31  IIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSG----D 86

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           +   +E+  +   RD  S+                                  N+LI+ Y
Sbjct: 87  LSTMQEIFSIMPNRDGVSW----------------------------------NSLISGY 112

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMM-DGLASVGRVEEALIRFRDMLVASLRPSEL 292
              G+VV+A K             +YN MM DG+ ++ R     I F  ML+        
Sbjct: 113 VCYGSVVEAVK-------------TYNSMMKDGVLNLNR-----ITFSTMLL-------- 146

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
               ++S+  C  +G Q+H Q +K GF AY  V ++ + MY+  G +  A  +F  +QE+
Sbjct: 147 ----LVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQER 202

Query: 353 DIV-------------------------------SWNTMISTYAQRNLGRSAILAYLEMQ 381
           ++V                               SW TMI+   Q  L   A+  + +M+
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G+  D++TFGS+L + G +  ++    IH  +  +G   N+ V +AL+  Y K   ++
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A  +F  M+ +N+++W  ++ G+  NGF  + ++ F ++  + + PD++TL   +SSCA
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            ++SL  G Q H   L + LIS +++ NA+ITLY KCG ++ S ++F+ M  +D +SW A
Sbjct: 383 NLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           L+S YAQ G+  E +  F+ M   G +KPD  TF AVLSACS AGLV+ G + F+SM+ D
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQG-LKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD 501

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G IP  DH +CM+DL GRAG L+EA+  IN       S  W  L S+C  +GN  +G+ 
Sbjct: 502 HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKW 561

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  LLE +   P+ Y+LLS+IYAA G W   A +R  ++  G  K+PG SWI
Sbjct: 562 AAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/541 (29%), Positives = 261/541 (48%), Gaps = 41/541 (7%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C   RN     +LH   +++       + N +++ Y    ++   + VF ++  P+ +SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---L 183
            T LSA +K G +    E+F  MP+RD   +N++I+G    G     +  +  M K   L
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           ++ R  +S   +L V   G ++ GRQ+H  + K GF   V V ++L+ MY   G V  A 
Sbjct: 135 NLNRITFS-TMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVAS 193

Query: 244 KVFEEAK-----------------GYVC------------DHISYNVMMDGLASVGRVEE 274
           +VF+E +                 G V             D IS+  M+ GL   G   E
Sbjct: 194 QVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAE 253

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  FRDM    +   + TF SV++AC   R    G ++H   ++SG+     V +A + 
Sbjct: 254 AMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVD 313

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  C  +  A  +F R+  K++VSW  M+  Y Q      A+  + +MQ  GI PD+FT
Sbjct: 314 MYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFT 373

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
            GS+++S   +  +E     H    ++G+I+ I VSNALI+ Y K   I+ + Q+F  MS
Sbjct: 374 LGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS 433

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            R+ ++W  L++G+   G   + +  F  +L+  L+PD  T    LS+C+R   +  G+Q
Sbjct: 434 FRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQ 493

Query: 509 IHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQH 566
               +LK++ I   S     MI L+ + G L+ +    N M    D+I W  L+S+   +
Sbjct: 494 YFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLY 553

Query: 567 G 567
           G
Sbjct: 554 G 554



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/472 (30%), Positives = 234/472 (49%), Gaps = 26/472 (5%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV-KRVFSE 117
           + ST L   ++      G Q+H   ++ G  AY  V ++++ +Y     LVSV  +VF E
Sbjct: 140 TFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKM-GLVSVASQVFDE 198

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           +Q  +V  + T ++   + G V  +  +F  M +RD   +  MITG  +NG E   + LF
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           R+M +  +  D Y+F SVL+ C  GL  L+ G+++H+L+ +SG++  V V +AL+ MY  
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTAC-GGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCK 317

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           C +V  A  VF+       + +S+  M+ G    G  EEA+  F DM    + P + T  
Sbjct: 318 CRSVRYAEAVFKRMANK--NVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLG 375

Query: 296 SVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           SV+S+C        G Q H QA+ SG  ++ +VSNA IT+Y  CG I+++  +F  +  +
Sbjct: 376 SVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFR 435

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MI 408
           D VSW  ++S YAQ       I  +  M   G++PD  TF ++L++     +VE      
Sbjct: 436 DEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYF 495

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
            + +  +GII        +I  + +  R+++A    + M  SP + I W TL++   L G
Sbjct: 496 ESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSP-DSIGWATLLSSCRLYG 554

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSC-------ARISSLRHGKQIHG 511
               G      LL  EL P      + LSS        + ++ LR G +  G
Sbjct: 555 NEEIGKWAAESLL--ELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKG 604



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 219/483 (45%), Gaps = 71/483 (14%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR- 367
           ++H   +KS     T + N  I  YS  G I  A  +F ++ + +  SWNTM+S Y++  
Sbjct: 26  KLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSG 85

Query: 368 NLGR------------------------------SAILAYLEMQSVGI-RPDEFTFGSLL 396
           +L                                 A+  Y  M   G+   +  TF ++L
Sbjct: 86  DLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTML 145

Query: 397 ---ASSGFIEMVEMIH---------AFVFIN----------GIIT------------NIQ 422
              +S G +++   IH         A+VF+           G+++            N+ 
Sbjct: 146 LLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVV 205

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           + N +I+   ++  +K + ++FH M  R+ I+W T+I G + NG   + +  F ++    
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEG 265

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +  D+YT    L++C  + +L+ GK+IH  ++++     + +G+A++ +Y KC  +  + 
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAE 325

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF  M  K+ +SW A++  Y Q+G  +EAV  F  MQ  G I+PD  T  +V+S+C++ 
Sbjct: 326 AVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG-IEPDDFTLGSVISSCANL 384

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
             +++G + F       G I      + ++ L G+ G ++++ ++ +    +    +W A
Sbjct: 385 ASLEEGAQ-FHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV-SWTA 442

Query: 663 LFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE-LLKRT 720
           L S  A  G       +   +L++  +     ++ + +  + AGL E      E +LK  
Sbjct: 443 LVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDH 502

Query: 721 GVI 723
           G+I
Sbjct: 503 GII 505



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/363 (25%), Positives = 167/363 (46%), Gaps = 45/363 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L ++G   +A+ LF  +     +  D Y+  + L AC  LR    G ++H   +R+G
Sbjct: 242 ITGLIQNGLEAEAMDLFRDMRQ-EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSG 300

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V + ++ +Y   R +   + VF  + N +V SWT                    
Sbjct: 301 YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWT-------------------- 340

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                      AM+ G  +NG+ +  + +F +M +  +  D+++  SV+S C +   LE 
Sbjct: 341 -----------AMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE 389

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q H     SG    ++V NALIT+Y  CG++ D+ ++F+E      D +S+  ++ G 
Sbjct: 390 GAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS--FRDEVSWTALVSGY 447

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKS-GFEA 321
           A  G+  E +  F  MLV  L+P  +TF++V+SAC    L  R G Q     +K  G   
Sbjct: 448 AQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVER-GQQYFESMLKDHGIIP 506

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSAILAY 377
           ++      I ++   G+++EA     ++    D + W T++S+   Y    +G+ A  + 
Sbjct: 507 FSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESL 566

Query: 378 LEM 380
           LE+
Sbjct: 567 LEL 569



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 9/153 (5%)

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C    +    K++H  ++K+    +  L N +I  Y+K G++  +  VF+ M + ++ SW
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKP--DQATFTAVLSACSHAGLVDDGTRIFDS 614
           N ++SAY++ G+          MQ++  I P  D  ++ +++S     G V +  + ++S
Sbjct: 75  NTMLSAYSKSGD-------LSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNS 127

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           M+ D          S ML L+   G +D   ++
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQI 160


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 225/701 (32%), Positives = 359/701 (51%), Gaps = 86/701 (12%)

Query: 77  NQLHAYALRAGLKAYPHVANTI-LSLYK----NARDLVSVKRVFSEIQ----NPDVYSWT 127
           NQL + AL++     P    TI LS+ +    N  +L    R+ S++       D ++ +
Sbjct: 19  NQLSS-ALKSTFNHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAAS 77

Query: 128 TFLSACTKMGHV--DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
             L   T    +  DY+ ++FD++ + +  ++N M+    ++   +  + L++ M K +V
Sbjct: 78  RLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNV 137

Query: 186 RRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             DNY++  V+  C   LLEFG +++H  V K GF   V V N LI MY  CGN+ DA K
Sbjct: 138 GPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARK 197

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           +F+E+   V D +S+N ++ G    G VEEA + F  M   ++                 
Sbjct: 198 LFDESP--VLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI----------------- 238

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
                                SN+ I +    G++ EA  +F  + EKD+VSW+ +IS Y
Sbjct: 239 -------------------VASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGY 279

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNI 421
            Q  +   A++ ++EM + G+R DE    S+L++   + +V+   MIH  V   GI + +
Sbjct: 280 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 339

Query: 422 QVSNALISAYAKNERIKQAYQIF---HN----------------------------MSPR 450
            + NALI  Y+ +  I  A ++F   HN                            M  +
Sbjct: 340 NLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK 399

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           +I++W+ +I+G+  +    + L  F E+ + ++RPDE  L   +S+C  +++L  GK +H
Sbjct: 400 DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVH 459

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
            Y+ KN L   + LG  ++ +Y KCG ++ +L VFN M EK   SWNALI   A +G  +
Sbjct: 460 AYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVE 519

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            ++  F  M++ G I P++ TF  VL AC H GLVD+G   F SM+  +G  P   H  C
Sbjct: 520 RSLDMFSEMKNNGVI-PNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC 578

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLLGRAG L+EAE++I S  +      W AL  AC  HG+  +G  +   L+E + D 
Sbjct: 579 MVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDH 638

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +VLLSNI+A+ G WE+   +R ++K+ GV+K PGCS I
Sbjct: 639 DGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLI 679



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 236/526 (44%), Gaps = 77/526 (14%)

Query: 43  LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG-NQLHAYALRAGLKAYPHVANTILSL 101
           L  ++   + + PD Y+    + ACA +R   FG  ++H + L+ G  +  +V NT++++
Sbjct: 127 LLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINM 185

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR--------- 152
           Y    ++   +++F E    D  SW + L+   K G V+ A  +FD+MP R         
Sbjct: 186 YAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMI 245

Query: 153 ----------------------DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
                                 D+  ++A+I+G  +NG  +  + +F EM+   +R D  
Sbjct: 246 VLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEV 305

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
              SVLS C    +++ G+ +H LV + G    V++ NALI MY   G ++DA K+F  +
Sbjct: 306 VVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGS 365

Query: 250 KGYVCDHISYNVMMDGLASVGRVE-------------------------------EALIR 278
             +  D IS+N M+ G    G VE                               E L  
Sbjct: 366 --HNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLAL 423

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F +M +  +RP E   VSV+SAC        G  VHA   K+G +    +    + MY  
Sbjct: 424 FHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMK 483

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG ++ A  +F  ++EK + SWN +I   A   L   ++  + EM++ G+ P+E TF  +
Sbjct: 484 CGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGV 543

Query: 396 LASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PR 450
           L +   + +V+       + +  +GI  N++    ++    +   + +A ++  +M    
Sbjct: 544 LGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAP 603

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ TW  L+     +G    G +   +L+  EL+PD     V LS+
Sbjct: 604 DVATWGALLGACKKHGDTEMGERVGRKLI--ELQPDHDGFHVLLSN 647



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 202/403 (50%), Gaps = 19/403 (4%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   ++G Y++AL +F++++++  ++ D   + + L+ACA+L     G  +H   +R G
Sbjct: 276 ISGYEQNGMYEEALVMFIEMNAN-GMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMG 334

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +++Y ++ N ++ +Y  + +++  +++F+   N D  SW + +S C K G V+ A  +FD
Sbjct: 335 IESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD 394

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEF 206
            MP++D+  ++A+I+G  ++      + LF EM    +R D     SV+S C     L+ 
Sbjct: 395 VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQ 454

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMD 264
           G+ +H+ + K+G    V +   L+ MY  CG V +A +VF   E KG      S+N ++ 
Sbjct: 455 GKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS----SWNALII 510

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFE 320
           GLA  G VE +L  F +M    + P+E+TF+ V+ AC    L         +   K G E
Sbjct: 511 GLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIE 570

Query: 321 AYTSVSNAAITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                    + +    G ++EA  +I +     D+ +W  ++   A +  G + +   + 
Sbjct: 571 PNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLG--ACKKHGDTEMGERVG 628

Query: 380 MQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGII 418
            + + ++PD   F  LL    AS G  E V  +   +   G++
Sbjct: 629 RKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 671


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 215/619 (34%), Positives = 319/619 (51%), Gaps = 76/619 (12%)

Query: 188 DNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           D+  FA +L  C    L   + R +H+ V KSGFS  + + N LI  Y  CG++ D  +V
Sbjct: 18  DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77

Query: 246 FEEAK-----------------GYVC------------DHISYNVMMDGLASVGRVEEAL 276
           F++                   G++             D  ++N M+ G A   R EEAL
Sbjct: 78  FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F  M       +E +F SV+SAC        G QVH+   KS F +   + +A + MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           S CG +++A  +F  + ++++VSWN++I+ + Q      A+  +  M    + PDE T  
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257

Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHN--- 446
           S++   AS   I++ + +H  V  N  + N I +SNA +  YAK  RIK+A  IF +   
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317

Query: 447 ----------------------------MSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
                                       M+ RN+++WN LI G+  NG   + L  F  L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLY 532
               + P  Y+ +  L +CA ++ L  G Q H +VLK+           + +GN++I +Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            KCG ++    VF  M+E+D +SWNA+I  +AQ+G G EA+  F+ M + G  KPD  T 
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITM 496

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             VLSAC HAG V++G   F SM  D+G  P  DH +CM+DLLGRAG+L+EA+ +I    
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
           +Q  S  W +L +AC  H N+ LG+ +A  LLE E      YVLLSN+YA  G WE+  N
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616

Query: 713 IRELLKRTGVIKQPGCSWI 731
           +R+ +++ GV KQPGCSWI
Sbjct: 617 VRKSMRKEGVTKQPGCSWI 635



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 280/570 (49%), Gaps = 58/570 (10%)

Query: 52  KLKPDIYSLSTT------LAACANLR-NAAFGNQLHAYALRAGLKAYPHVANTILSLYKN 104
           KL  D+ S + +      L +C   + +A +   +HA  +++G      + N ++  Y  
Sbjct: 8   KLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSK 67

Query: 105 ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC 164
              L   ++VF ++   ++Y+W + ++  TK+G +D A  +F  MP+RD   +N+M++G 
Sbjct: 68  CGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCL 222
            ++   +  +  F  MHK     + YSFASVLS C +GL  +  G Q+HSL+ KS F   
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC-SGLNDMNKGVQVHSLIAKSPFLSD 186

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
           V + +AL+ MY  CGNV DA +VF+E      + +S+N ++      G   EAL  F+ M
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDR--NVVSWNSLITCFEQNGPAVEALDVFQMM 244

Query: 283 LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGK 338
           L + + P E+T  SV+SAC      +VG +VH + +K+        +SNA + MY+ C +
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304

Query: 339 IDEACMI-------------------------------FARLQEKDIVSWNTMISTYAQR 367
           I EA  I                               F ++ E+++VSWN +I+ Y Q 
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASS--------GFIEMVEMI-HAFVFINGII 418
                A+  +  ++   + P  ++F ++L +         G    V ++ H F F +G  
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +I V N+LI  Y K   +++ Y +F  M  R+ ++WN +I GF  NG+  + L+ F E+
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGD 537
           L S  +PD  T+   LS+C     +  G+     + ++  ++ +      M+ L  + G 
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544

Query: 538 LDCSLRVFNMM-IEKDTISWNALISAYAQH 566
           L+ +  +   M ++ D++ W +L++A   H
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 72/422 (17%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  ++    ++AL  F  +H    +  + YS ++ L+AC+ L +   G Q+H+   
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNE-YSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++   +  ++ + ++ +Y    ++   +RVF E+ + +V SW                  
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW------------------ 221

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                        N++IT   +NG     + +F+ M +  V  D  + ASV+S C +   
Sbjct: 222 -------------NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268

Query: 204 LEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAK------------ 250
           ++ G+++H  V K+      + + NA + MY  C  + +A  +F+               
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328

Query: 251 GYVC-----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           GY                   + +S+N ++ G    G  EEAL  F  +   S+ P+  +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388

Query: 294 FVSVMSACLC---PRVGYQVHAQAMKSGFEAYTS------VSNAAITMYSSCGKIDEACM 344
           F +++ AC       +G Q H   +K GF+  +       V N+ I MY  CG ++E  +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F ++ E+D VSWN MI  +AQ   G  A+  + EM   G +PD  T   +L++ G    
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508

Query: 405 VE 406
           VE
Sbjct: 509 VE 510



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 180/381 (47%), Gaps = 35/381 (9%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LK 89
             ++G   +AL +F Q+    +++PD  +L++ ++ACA+L     G ++H   ++   L+
Sbjct: 228 FEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               ++N  + +Y     +   + +F  +   +V + T+ +S          A  +F KM
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
            +R++  +NA+I G T+NG  +  + LF  + +  V   +YSFA++L  C D   L  G 
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406

Query: 209 QLHSLVTKSGFSCL------VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           Q H  V K GF         + V N+LI MY  CG V +   VF +     C  +S+N M
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC--VSWNAM 464

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           + G A  G   EAL  FR+ML +  +P  +T + V+SAC         HA  ++ G   +
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC--------GHAGFVEEGRHYF 516

Query: 323 TSVSN----AAITMYSSC--------GKIDEA-CMIFARLQEKDIVSWNTMIST-YAQRN 368
           +S++     A +  + +C        G ++EA  MI     + D V W ++++     RN
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576

Query: 369 --LGRSAILAYLEMQSVGIRP 387
             LG+      LE++     P
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGP 597



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 72/342 (21%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  +++G  ++AL LF  +     + P  YS +  L ACA+L     G Q H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLL-KRESVCPTHYSFANILKACADLAELHLGMQAH 409

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + L+ G K                         F   +  D++   + +    K G V+
Sbjct: 410 VHVLKHGFK-------------------------FQSGEEDDIFVGNSLIDMYVKCGCVE 444

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
               VF KM +RD   +NAMI G  +NGY +  + LFREM +   + D+ +   VLS C 
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AG +E GR   S +T+                 F    + D                 Y
Sbjct: 505 HAGFVEEGRHYFSSMTRD----------------FGVAPLRD----------------HY 532

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
             M+D L   G +EEA     +M    ++P  + + S+++AC   R   +G  V  + ++
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEM---PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589

Query: 317 ---SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
              S    Y  +SN    MY+  GK ++   +   ++++ + 
Sbjct: 590 VEPSNSGPYVLLSN----MYAELGKWEDVMNVRKSMRKEGVT 627


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 233/745 (31%), Positives = 376/745 (50%), Gaps = 75/745 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           +L+  L +C +    A    LH   +  GL +   + NT+L  Y +   L   +R+  ++
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I+ P+V +    ++   K G +  A E+FD+MP RD+  +N +++G  +      G+  F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             MH+  D   + ++F  V+  C A G  E   QL  L  K  F     V  AL+ M+  
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 236 CGNVVDACKVFEE----------------AKGYVCDH-------------ISYNVMMDGL 266
           CG V  A ++F +                AK Y  DH             +S+N+M+  L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  GRV EAL    +M    +R    T+ S ++AC        G Q+HA+ ++S  +   
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A I +Y+ CG   EA  +F  LQ+++ VSW  +I    Q      ++  + +M++ 
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK----- 433
            +  D+F   +L+  SG    +++     +H+    +G    I VSN+LIS YAK     
Sbjct: 366 LMAIDQFALATLI--SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423

Query: 434 ---------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
                    +ER                 I +A + F  M+ RN ITWN ++  ++ +G 
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGA 483

Query: 468 PVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              GL+ +S +L   ++ PD  T       CA I + + G QI G+ +K  LI  +S+ N
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A IT+Y+KCG +  + ++F+++  KD +SWNA+I+ Y+QHG GK+A   F  M   G  K
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG-AK 602

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  ++ AVLS CSH+GLV +G   FD M   +G  P  +H SCM+DLLGRAG+L EA+ 
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I+   ++  ++ W AL SAC  HGN  L  + A  + E +      Y+LL+ IY+ AG 
Sbjct: 663 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
            +++A +R+L++  G+ K PG SW+
Sbjct: 723 SDDSAQVRKLMRDKGIKKNPGYSWM 747



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 309/651 (47%), Gaps = 57/651 (8%)

Query: 12  GNSNTSKELLLKL---NISLANLSRSGHYQ-----DALHLFVQIHSSHKLKPDIYSLSTT 63
           G+ + ++EL  ++   +++  N   SG++Q     D L  FV +H S    P+ ++    
Sbjct: 85  GSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           + +C  L       QL     +      P V   ++ ++     +    R+FS+I+ P +
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +   + L+   K+  +D+A E F+ M +RD+  +N MI   +++G     +GL  EMH+ 
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 184 DVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            VR D+ ++ S L+ C     L +G+QLH+ V +S       V +ALI +Y  CG+  +A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
            +VF   +    + +S+ V++ G        +++  F  M    +   +    +++S C 
Sbjct: 325 KRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382

Query: 302 ----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
               LC  +G Q+H+  +KSG      VSN+ I++Y+ CG +  A  +F+ + E+DIVSW
Sbjct: 383 NRMDLC--LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440

Query: 358 NTMISTYAQ----------------RN-LGRSAIL-AYLE--------------MQSVGI 385
            +MI+ Y+Q                RN +  +A+L AY++              +    +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD  T+ +L    A  G  ++ + I       G+I N+ V+NA I+ Y+K  RI +A +
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  ++ +++++WN +I G+  +G   Q  + F ++L    +PD  +    LS C+    
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 503 LRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALI 560
           ++ GK     + + + IS  +   + M+ L  + G L  +  + + M  K T   W AL+
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           SA   HG  + A    K + ++    PD  ++  +    S AG  DD  ++
Sbjct: 681 SACKIHGNDELAELAAKHVFELD--SPDSGSYMLLAKIYSDAGKSDDSAQV 729


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 209/627 (33%), Positives = 351/627 (55%), Gaps = 22/627 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF-REM 180
           D+Y  +  +SA  + G  D A ++F  +  ++    N +I G     + +  + +F    
Sbjct: 309 DLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR 368

Query: 181 HKLDVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFN 235
           + +DV  D Y    S  +  S+ + GL   GR +H  + ++G + L ++V N L+ MY  
Sbjct: 369 NTVDVNADTYVVLLSALAEYSISEEGL-RIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAK 427

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG +  A K+F+  +    D IS+N ++  L   G  EEA++ +  M  + + PS    +
Sbjct: 428 CGAIESASKIFQLMEA--TDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485

Query: 296 SVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S +S+C   ++   G QVH  A+K G +  TSVSN  + MY  CG + +   +F  + E 
Sbjct: 486 SSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEH 545

Query: 353 DIVSWNTMISTYAQRNLGRSAIL-AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           D VSWNTM+   A      S I+  +  M   G+ P++ TF +LLA+   + ++E+   +
Sbjct: 546 DEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGF 467
           HA V  +G++ +  V NALIS YAK+  +     +F NMS R + I+WN++I+G++ NG 
Sbjct: 606 HAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGN 665

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +     ++ S    D  T S+ L++CA +++L  G ++H + ++++L S + + +A
Sbjct: 666 LQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESA 725

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y+KCG +D + ++FN M +++  SWN++IS YA+HG G++A+  F+ M    R  P
Sbjct: 726 LVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLR-SRESP 784

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF +VLSACSHAGLV+ G   F+ M+ D+G +P  +H SC++DLLGRAG +D+ +  
Sbjct: 785 DHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEY 843

Query: 648 INSQHIQARSDNWWALFSACAAH---GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           I    I+  +  W  +  AC       N+ LGR  + +LLE E   P  YVL SN +AA 
Sbjct: 844 IQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAAT 903

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G+WE+ A  R  +++    K+ G SW+
Sbjct: 904 GMWEDTAKARTAMRQATEKKEAGRSWV 930



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 160/581 (27%), Positives = 289/581 (49%), Gaps = 32/581 (5%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N D++     +++  K   +  A +VFD+MP+R+   +  +++G   +G  +    +FR 
Sbjct: 93  NHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRA 152

Query: 180 MHK---LDVRRDNYSFASVLSVCDAG---LLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           M +      R  +++F ++L  C  G    L F  Q+H LV+K+ ++   +V NALI+MY
Sbjct: 153 MLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMY 212

Query: 234 FNC--GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA----SL 287
            +C  G  + A +VF+     + D I++N +M   A  G V      F+DM        L
Sbjct: 213 GSCTVGPPILAQRVFDGTP--IRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQL 270

Query: 288 RPSELTFVSVMSACLCPR----VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           RP+E TF S+++A         V  QV    +KSG  +   V +A ++ ++  G  DEA 
Sbjct: 271 RPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAK 330

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFT-FGSLLA---- 397
            IF  L++K+ V+ N +I    +++    A+  ++  + +V +  D +    S LA    
Sbjct: 331 DIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSI 390

Query: 398 SSGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           S   + +  ++H  +   G+    I VSN L++ YAK   I+ A +IF  M   + I+WN
Sbjct: 391 SEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWN 450

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           T+I+    NG   + + H+S +  S + P  + L  +LSSCA +  L  G+Q+H   +K 
Sbjct: 451 TIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKW 510

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG-KEAVSC 575
            L    S+ N ++ +Y +CG +    +VFN M E D +SWN ++   A       E V  
Sbjct: 511 GLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKV 570

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLD 633
           F  M   G I P++ TF  +L+A S   +++ G ++  + V  +G +  ED++  + ++ 
Sbjct: 571 FNNMMRGGLI-PNKVTFINLLAALSPLSVLELGKQVH-AAVMKHGVM--EDNVVDNALIS 626

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
              ++G +   E +  +   +  + +W ++ S    +GNL+
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 203/443 (45%), Gaps = 40/443 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L ++G+ ++A+  +  +  S  + P  ++L ++L++CA L+    G Q+H  A+
Sbjct: 450 NTIISALDQNGNCEEAVMHYSLMRQS-CISPSNFALISSLSSCAGLKLLTAGQQVHCDAV 508

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     V+N ++ +Y     +    +VF+ +   D  SW T +              
Sbjct: 509 KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGV------------ 556

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
               M     P+                 + +F  M +  +  +  +F ++L+      +
Sbjct: 557 ----MASSQTPISEI--------------VKVFNNMMRGGLIPNKVTFINLLAALSPLSV 598

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+Q+H+ V K G      V NALI+ Y   G++     +F        D IS+N M+
Sbjct: 599 LELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRR-DAISWNSMI 657

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G    G ++EA+     M+ +       TF  +++AC        G ++HA  ++S  E
Sbjct: 658 SGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLE 717

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V +A + MYS CG++D A  +F  + +++  SWN+MIS YA+  LGR AI  + EM
Sbjct: 718 SDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEM 777

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFI--NGIITNIQVSNALISAYAKNERI 437
                 PD  TF S+L++     +VE  +  F  +  +GI+  I+  + +I    +  +I
Sbjct: 778 LRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKI 837

Query: 438 KQAYQIFHNMS-PRNIITWNTLI 459
            +  +    M    N + W T++
Sbjct: 838 DKIKEYIQRMPIEPNALIWRTVL 860


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 234/744 (31%), Positives = 375/744 (50%), Gaps = 75/744 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G   +++ +F+++  S  ++ D  S S  L  C+ L N   G Q+H  AL
Sbjct: 150 NSMLSGFLQTGENLESVKVFIEMGRS-GVEFDNKSFSVILKVCSILENYKLGTQIHGIAL 208

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G                                + DV S +  L    K   +D +  
Sbjct: 209 RMGY-------------------------------DTDVVSGSALLDMYAKCKRLDESFT 237

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           VF  MP ++   ++A+I GC +N + D G+ +F+EM K+ V      +ASVL  C A L 
Sbjct: 238 VFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSC-ATLP 296

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G QLH+   KS F     V  A + MY  C N+ DA ++F+ ++       SYN M
Sbjct: 297 DLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQ--SYNAM 354

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G +       AL+ FR +  +SL   E++    + AC   +    G Q+H  A KS F
Sbjct: 355 ITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNF 414

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL- 378
                V+NA I MY  C  +DEAC +F  +  KD VSWN +I+ + Q N  RS  L  L 
Sbjct: 415 SRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQ-NEERSKTLNILV 473

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G+ PDE+TFGS+L   A       +E IH  +   G+ +N  + ++L+  Y+K  
Sbjct: 474 SMLRSGMEPDEYTFGSVLKACAGDSLNHGME-IHTTIVKLGMASNPYIGSSLVDMYSKCG 532

Query: 436 RIKQAYQIFHNM------------------SPRNI---------ITWNTLINGFLLNGFP 468
            I +A +I + +                   P+ I         ++WN +I+G+++    
Sbjct: 533 MIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQS 592

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
               + F+ ++   + PD++T S  L +CA ++S+  GKQIH +V+K  L   + + + +
Sbjct: 593 EDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTL 652

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +Y+KCG+L  S  +F     +D ++WNA+I  YA HG G+EA+  F++M  +  I P+
Sbjct: 653 VDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMV-LMNIMPN 711

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            ATF ++L AC+H GLV+ G   F  M  +YG  P  +H S M+D+LG++G +++A  +I
Sbjct: 712 HATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELI 771

Query: 649 NSQHIQARSDNWWALFSACAAH-GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
                +A    W  L SAC  +  N+    + A  LL  +    S Y+LLSNIYA AG+W
Sbjct: 772 QEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMW 831

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++A+ +R  ++   + K+PGCSW+
Sbjct: 832 DKASELRTAMRSDKLKKEPGCSWV 855



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 182/709 (25%), Positives = 332/709 (46%), Gaps = 55/709 (7%)

Query: 54  KP--DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           KP   + + S     CA  R    G Q HA+ + +G +    V+N +L LY N  +L   
Sbjct: 44  KPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYA 103

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
            ++F  +   DV SW   +        +  A   F+ MP RD+  +N+M++G  + G   
Sbjct: 104 TKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENL 163

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNA 228
             + +F EM +  V  DN SF+ +L VC   +LE    G Q+H +  + G+   V   +A
Sbjct: 164 ESVKVFIEMGRSGVEFDNKSFSVILKVC--SILENYKLGTQIHGIALRMGYDTDVVSGSA 221

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY  C  + ++  VF        + IS++ ++ G      ++  L  F++M    + 
Sbjct: 222 LLDMYAKCKRLDESFTVFYAMPQK--NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVG 279

Query: 289 PSELTFVSVMSAC-LCP--RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            S+  + SV+ +C   P  R+G Q+HA A+KS F     V  A + MY+ C  + +A  +
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEM 404
           F   +  ++ S+N MI+ Y+Q++ G  A+L + ++    +  DE +  G+L A +    +
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGL 399

Query: 405 VE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            E   +H     +    NI V+NA I  Y K E + +A ++F  M  ++ ++WN +I   
Sbjct: 400 SEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAH 459

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             N    + L     +L S + PDEYT    L +CA   SL HG +IH  ++K  + S  
Sbjct: 460 EQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNP 518

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMM---------------------------IEKDTIS 555
            +G++++ +Y+KCG +D + ++ N +                           +++  +S
Sbjct: 519 YIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVS 578

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+IS Y    + ++A   F  M ++G I PD+ T++ VL  C++   +  G +I   +
Sbjct: 579 WNAIISGYVMRKQSEDAQRFFNRMMEMG-ITPDKFTYSTVLDTCANLASIGLGKQIHAHV 637

Query: 616 VNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           +     +  + ++ S ++D+  + G L ++  +     I+     W A+    A HG   
Sbjct: 638 IKKE--LQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFV-TWNAMICGYAHHG--- 691

Query: 675 LG----RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           +G    ++   ++L       + +V L    A  GL E   +   ++K+
Sbjct: 692 MGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKK 740



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 201/481 (41%), Gaps = 72/481 (14%)

Query: 24  LNISLANLSRSGHYQD-----ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
           LN+   N   +G+ Q      AL LF ++  S  L  D  SLS  L ACA ++  + G Q
Sbjct: 346 LNLQSYNAMITGYSQKDNGFRALLLFRKLSKS-SLGFDEISLSGALRACATVKGLSEGLQ 404

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH  A ++       VAN  + +Y     L    RVF E+   D  SW            
Sbjct: 405 LHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSW------------ 452

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                              NA+I    +N      + +   M +  +  D Y+F SVL  
Sbjct: 453 -------------------NAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKA 493

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV------------- 245
           C    L  G ++H+ + K G +    + ++L+ MY  CG + +A K+             
Sbjct: 494 CAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNT 553

Query: 246 -------FEEAKGYVCDH------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
                   EE KG + D       +S+N ++ G     + E+A   F  M+   + P + 
Sbjct: 554 YSEHPETIEEPKG-IQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKF 612

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T+ +V+  C       +G Q+HA  +K   +    + +  + MYS CG + ++ ++F + 
Sbjct: 613 TYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKA 672

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
             +D V+WN MI  YA   +G  AI  +  M  + I P+  TF SLL +   + +VE   
Sbjct: 673 PIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGL 732

Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLL 464
              H      G+   ++  + ++    K+  +++A ++   M    + + W TL++   +
Sbjct: 733 DYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKI 792

Query: 465 N 465
           N
Sbjct: 793 N 793



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 34/233 (14%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           +E+++  N  ++        +DA   F ++     + PD ++ ST L  CANL +   G 
Sbjct: 573 QEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEM-GITPDKFTYSTVLDTCANLASIGLGK 631

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+HA+ ++  L+                                DVY  +T +   +K G
Sbjct: 632 QIHAHVIKKELQY-------------------------------DVYICSTLVDMYSKCG 660

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           ++  +  +F+K P RD   +NAMI G   +G  +  I LF  M  +++  ++ +F S+L 
Sbjct: 661 NLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLR 720

Query: 198 VC-DAGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            C   GL+E G    H +  + G    +   + ++ +    G V  A ++ +E
Sbjct: 721 ACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQE 773


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  355 bits (911), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 232/746 (31%), Positives = 378/746 (50%), Gaps = 53/746 (7%)

Query: 1   MLQRRITATIAGNSNTSK---ELLLKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKP 55
           +L RR    +A  S+  +      L  N  +  L+ +G Y+ AL  ++++  H S  L P
Sbjct: 86  VLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPL-P 144

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++    + +CA L   A G  +H  A   GL     V + ++ +Y N   L       
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLL------- 197

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                     W               A +VFD M +RD  ++N M+ G  + G     + 
Sbjct: 198 ----------WD--------------ARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233

Query: 176 LFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF +M       +  + A  LSV      L FG QLH+L  K G    V+V N L++MY 
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293

Query: 235 NCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            C  + D  K+F    G +   D +++N M+ G    G V++AL+ F DM  + +RP  +
Sbjct: 294 KCKCLDDGWKLF----GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349

Query: 293 TFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           T VS++ A L    G+    ++H   +++       + +A + +Y  C  +  A  ++  
Sbjct: 350 TLVSLLPA-LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
            +  D+V  +TMIS Y    + + A+  +  +   GIRP+     S+L   AS   +++ 
Sbjct: 409 SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLG 468

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +H++   N       V +AL+  YAK  R+  ++ IF  +S ++ +TWN++I+ F  N
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G P + L  F E+ M  ++    T+S  LS+CA + ++ +GK+IHG V+K  + + +   
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAE 588

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y KCG+L+ + RVF  M EK+ +SWN++I++Y  +G  KE+VS  + MQ+ G  
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEG-F 647

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           K D  TF A++SAC+HAG V +G R+F  M  +Y   P  +H +CM+DL  RAG LD+A 
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I     +  +  W AL  AC  H N+ L  I +  L + +      YVL+SNI A AG
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+  + +R L+K T V K PG SW+
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYSWV 793



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 200/707 (28%), Positives = 343/707 (48%), Gaps = 83/707 (11%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT-ILSLYKNARDLVSVKR 113
           PD   L   L  C +  + + G Q+H  A+ AGL A      T ++ +Y  AR       
Sbjct: 38  PD-RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VFS +            +AC                    LP +N +I G T  G     
Sbjct: 97  VFSSLPRG--------AAACA-------------------LP-WNWLIRGLTMAGDYRSA 128

Query: 174 IGLFREM--HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
           +  + +M  H      D+++F  V+  C A G +  GR +H      G    + V +ALI
Sbjct: 129 LLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALI 188

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY N G + DA +VF+      C  + +NVMMDG    G V  A+  F DM  +   P+
Sbjct: 189 KMYANGGLLWDARQVFDGMAERDC--VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246

Query: 291 ELT---FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             T   F+SV +       G Q+H  A+K G E+  +V+N  ++MY+ C  +D+   +F 
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIE 403
            +   D+V+WN MIS   Q      A+L + +MQ  GIRPD  T  SLL +    +GF +
Sbjct: 307 LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             E+ H ++  N +  ++ + +AL+  Y K   ++ A  ++ +    +++  +T+I+G++
Sbjct: 367 GKEL-HGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
           LNG   + ++ F  LL   +RP+   ++  L +CA +++++ G+++H Y LKN    +  
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A++ +YAKCG LD S  +F+ +  KD ++WN++IS++AQ+GE +EA++ F+ M   G
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLD 642
            +K    T ++VLSAC+    +  G  I   ++   G I A+    S ++D+ G+ G L+
Sbjct: 546 -VKYSNVTISSVLSACASLPAIYYGKEIHGVVIK--GPIRADLFAESALIDMYGKCGNLE 602

Query: 643 EAERVINS-----------------------------QHIQA---RSDN--WWALFSACA 668
            A RV  S                             +H+Q    ++D+  + AL SACA
Sbjct: 603 WAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSV--YVLLSNIYAAAGLWEEAANI 713
             G ++ G  +   + E  Q  P +  +  + ++Y+ AG  ++A  +
Sbjct: 663 HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMEL 709


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 233/745 (31%), Positives = 375/745 (50%), Gaps = 75/745 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           +L+  L +C +    A    LH   +  GL +   + NT+L  Y +   L   +R+  ++
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I+ P+V +    ++   K G +  A E+FD+MP RD+  +N +++G  +      G+  F
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             MH+  D   + ++F  V+  C A G  E   QL  L  K  F     V  AL+ M+  
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185

Query: 236 CGNVVDACKVFEE----------------AKGYVCDH-------------ISYNVMMDGL 266
           CG V  A ++F +                AK Y  DH             +S+N+M+  L
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +  GRV EAL    +M    +R    T+ S ++AC        G Q+HA+ ++S  +   
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A I +Y+ CG   EA  +F  LQ+++ VSW  +I    Q      ++  + +M++ 
Sbjct: 306 YVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAE 365

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK----- 433
            +  D+F   +L+  SG    +++     +H+    +G    I VSN+LIS YAK     
Sbjct: 366 LMAIDQFALATLI--SGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQ 423

Query: 434 ---------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
                    +ER                 I +A + F  M  RN ITWN ++  ++ +G 
Sbjct: 424 NAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGA 483

Query: 468 PVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              GL+ +S +L   ++ PD  T       CA I + + G QI G+ +K  LI  +S+ N
Sbjct: 484 EEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVAN 543

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A IT+Y+KCG +  + ++F+++  KD +SWNA+I+ Y+QHG GK+A   F  M   G  K
Sbjct: 544 AAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKG-AK 602

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  ++ AVLS CSH+GLV +G   FD M   +G  P  +H SCM+DLLGRAG+L EA+ 
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I+   ++  ++ W AL SAC  HGN  L  + A  + E +      Y+LL+ IY+ AG 
Sbjct: 663 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
            +++A +R+L++  G+ K PG SW+
Sbjct: 723 SDDSAQVRKLMRDKGIKKNPGYSWM 747



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 166/651 (25%), Positives = 309/651 (47%), Gaps = 57/651 (8%)

Query: 12  GNSNTSKELLLKL---NISLANLSRSGHYQ-----DALHLFVQIHSSHKLKPDIYSLSTT 63
           G+ + ++EL  ++   +++  N   SG++Q     D L  FV +H S    P+ ++    
Sbjct: 85  GSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCV 144

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           + +C  L       QL     +      P V   ++ ++     +    R+FS+I+ P +
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +   + L+   K+  +D+A E F+ M +RD+  +N MI   +++G     +GL  EMH+ 
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264

Query: 184 DVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            VR D+ ++ S L+ C     L +G+QLH+ V +S       V +ALI +Y  CG+  +A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
            +VF   +    + +S+ V++ G        +++  F  M    +   +    +++S C 
Sbjct: 325 KRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCF 382

Query: 302 ----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
               LC  +G Q+H+  +KSG      VSN+ I++Y+ CG +  A  +F+ + E+DIVSW
Sbjct: 383 NRMDLC--LGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSW 440

Query: 358 NTMISTYAQ----------------RN-LGRSAIL-AYLE--------------MQSVGI 385
            +MI+ Y+Q                RN +  +A+L AY++              +    +
Sbjct: 441 TSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDV 500

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD  T+ +L    A  G  ++ + I       G+I N+ V+NA I+ Y+K  RI +A +
Sbjct: 501 TPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQK 560

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  ++ +++++WN +I G+  +G   Q  + F ++L    +PD  +    LS C+    
Sbjct: 561 LFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620

Query: 503 LRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALI 560
           ++ GK     + + + IS  +   + M+ L  + G L  +  + + M  K T   W AL+
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALL 680

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           SA   HG  + A    K + ++    PD  ++  +    S AG  DD  ++
Sbjct: 681 SACKIHGNDELAELAAKHVFELD--SPDSGSYMLLAKIYSDAGKSDDSAQV 729


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 214/684 (31%), Positives = 346/684 (50%), Gaps = 41/684 (5%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD  +L++ L AC    +   G ++H  A++ GL     VAN ++ +Y     L S  RV
Sbjct: 162 PDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRV 221

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F  +Q                                RD+  +N++++GC +NG     +
Sbjct: 222 FEWLQQDA-----------------------------RDVASWNSVVSGCVQNGRTLEAL 252

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LFR M       ++Y+  +VL VC + GLL  GR+LH+ + K G S L    NAL+ MY
Sbjct: 253 ALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCG-SELNIQCNALLVMY 311

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              G V  A +VF +      D+IS+N M+          EA+  F +ML    +P    
Sbjct: 312 AKYGRVDSALRVFGQIAEK--DYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHAC 369

Query: 294 FVSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            VS+ SA     R+  G + HA A+K        V N  + MY  CG I+ +  +F  + 
Sbjct: 370 VVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMG 429

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
            +D +SW T+++ +AQ +    A+   LE+Q  GI  D    GS+L +      I +++ 
Sbjct: 430 IRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQ 489

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H +   NG++ ++ + N LI  Y +      +  +F  +  ++I++W ++IN    NG 
Sbjct: 490 VHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGR 548

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               +  F+E+  + ++PD   L   L + A +SSL  GKQ+HG++++ N   +  + ++
Sbjct: 549 LNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSS 608

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y+ CG ++ ++RVF     KD + W A+I+A   HG GK+A+  FK M   G + P
Sbjct: 609 LVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTG-LTP 667

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  +F A+L ACSH+ LV++G    D MV+ Y   P ++H +C++D+LGR+G  +EA   
Sbjct: 668 DHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEF 727

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +  +  +S  W AL  AC  H N  L  + A  LLE E D P  Y+L+SN++A  G W
Sbjct: 728 IKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKW 787

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
             A   R  +   G+ K P CSWI
Sbjct: 788 NNAKETRTRMAERGLRKNPACSWI 811



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 173/611 (28%), Positives = 283/611 (46%), Gaps = 51/611 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+HA+A+  G            SL ++    ++ K VF       +Y          +
Sbjct: 76  GRQVHAHAVTTG------------SLNEDDDGFLATKLVF-------MYG---------R 107

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI---GLFREMHKLDVRRDNYSF 192
            G VD A  +F+ MP R +  +NA++     +G     +   G  R         D  + 
Sbjct: 108 CGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTL 167

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           ASVL  C A G    G ++H L  K G      V NALI MY  CG +  A +VFE  + 
Sbjct: 168 ASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQ 227

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGY 308
              D  S+N ++ G    GR  EAL  FR M  A    +  T V+V+  C       +G 
Sbjct: 228 DARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGR 287

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           ++HA  +K G E      NA + MY+  G++D A  +F ++ EKD +SWN+M+S Y Q +
Sbjct: 288 ELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNS 346

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSN 425
               AI  + EM   G +PD     SL ++ G +  +      HA+     + T++QV N
Sbjct: 347 FYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGN 406

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            L+  Y K   I+ + ++F +M  R+ I+W T++  F  +    + L+   EL    +  
Sbjct: 407 TLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMV 466

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   +   L +C  + S+   KQ+H Y ++N L+  + L N +I +Y +CG+ D SL +F
Sbjct: 467 DSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLD-LILENRLIDIYGECGEFDHSLNLF 525

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             + +KD +SW ++I+    +G    AV  F  MQ    I+PD     ++L A +    +
Sbjct: 526 QRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKA-NIQPDSVALVSILVAIAGLSSL 584

Query: 606 DDGTRIFDSMVNDYGFIPAEDH-LSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WW 661
             G ++   ++      P E   +S ++D+    G ++ A RV      +A+  +   W 
Sbjct: 585 TKGKQVHGFLIRRN--FPIEGPVVSSLVDMYSGCGSMNYAIRVFE----RAKCKDVVLWT 638

Query: 662 ALFSACAAHGN 672
           A+ +A   HG+
Sbjct: 639 AMINATGMHGH 649



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           + +G    A+ LF ++  ++ ++PD  +L + L A A L +   G Q+H + +R      
Sbjct: 544 TNNGRLNGAVFLFTEMQKAN-IQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIE 602

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
             V ++++ +Y     +    RVF   +  DV  WT  ++A    GH   A ++F +M
Sbjct: 603 GPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRM 660


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 232/746 (31%), Positives = 378/746 (50%), Gaps = 53/746 (7%)

Query: 1   MLQRRITATIAGNSNTSK---ELLLKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKP 55
           +L RR    +A  S+  +      L  N  +  L+ +G Y+ AL  ++++  H S  L P
Sbjct: 86  VLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPL-P 144

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++    + +CA L   A G  +H  A   GL     V + ++ +Y N   L       
Sbjct: 145 DSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLL------- 197

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                     W               A +VFD M +RD  ++N M+ G  + G     + 
Sbjct: 198 ----------WD--------------ARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVE 233

Query: 176 LFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF +M       +  + A  LSV      L FG QLH+L  K G    V+V N L++MY 
Sbjct: 234 LFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYA 293

Query: 235 NCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            C  + D  K+F    G +   D +++N M+ G    G V++AL+ F DM  + +RP  +
Sbjct: 294 KCKCLDDGWKLF----GLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSV 349

Query: 293 TFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           T VS++ A L    G+    ++H   +++       + +A + +Y  C  +  A  ++  
Sbjct: 350 TLVSLLPA-LTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
            +  D+V  +TMIS Y    + + A+  +  +   GIRP+     S+L   AS   +++ 
Sbjct: 409 SKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLG 468

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +H++   N       V +AL+  YAK  R+  ++ IF  +S ++ +TWN++I+ F  N
Sbjct: 469 QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQN 528

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G P + L  F E+ M  ++    T+S  LS+CA + ++ +GK+IHG V+K  + + +   
Sbjct: 529 GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAE 588

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y KCG+L+ + RVF  M EK+ +SWN++I++Y  +G  KE+VS  + MQ+ G  
Sbjct: 589 SALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEG-F 647

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           K D  TF A++SAC+HAG V +G R+F  M  +Y   P  +H +CM+DL  RAG LD+A 
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I     +  +  W AL  AC  H N+ L  I +  L + +      YVL+SNI A AG
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+  + +R L+K T V K PG SW+
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYSWV 793



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 200/707 (28%), Positives = 343/707 (48%), Gaps = 83/707 (11%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT-ILSLYKNARDLVSVKR 113
           PD   L   L  C +  + + G Q+H  A+ AGL A      T ++ +Y  AR       
Sbjct: 38  PD-RRLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VFS +            +AC                    LP +N +I G T  G     
Sbjct: 97  VFSSLPRG--------AAACA-------------------LP-WNWLIRGLTMAGDYRSA 128

Query: 174 IGLFREM--HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
           +  + +M  H      D+++F  V+  C A G +  GR +H      G    + V +ALI
Sbjct: 129 LLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALI 188

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY N G + DA +VF+      C  + +NVMMDG    G V  A+  F DM  +   P+
Sbjct: 189 KMYANGGLLWDARQVFDGMAERDC--VLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246

Query: 291 ELT---FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             T   F+SV +       G Q+H  A+K G E+  +V+N  ++MY+ C  +D+   +F 
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFG 306

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIE 403
            +   D+V+WN MIS   Q      A+L + +MQ  GIRPD  T  SLL +    +GF +
Sbjct: 307 LMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQ 366

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             E+ H ++  N +  ++ + +AL+  Y K   ++ A  ++ +    +++  +T+I+G++
Sbjct: 367 GKEL-HGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYV 425

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
           LNG   + ++ F  LL   +RP+   ++  L +CA +++++ G+++H Y LKN    +  
Sbjct: 426 LNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCY 485

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A++ +YAKCG LD S  +F+ +  KD ++WN++IS++AQ+GE +EA++ F+ M   G
Sbjct: 486 VESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEG 545

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLD 642
            +K    T ++VLSAC+    +  G  I   ++   G I A+    S ++D+ G+ G L+
Sbjct: 546 -VKYSNVTISSVLSACASLPAIYYGKEIHGVVIK--GPIRADLFAESALIDMYGKCGNLE 602

Query: 643 EAERVINS-----------------------------QHIQA---RSDN--WWALFSACA 668
            A RV  S                             +H+Q    ++D+  + AL SACA
Sbjct: 603 WAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSV--YVLLSNIYAAAGLWEEAANI 713
             G ++ G  +   + E  Q  P +  +  + ++Y+ AG  ++A  +
Sbjct: 663 HAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMEL 709


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 220/691 (31%), Positives = 354/691 (51%), Gaps = 48/691 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P   + ++ L+A AN      G Q+HA A+R GL A   V +++++LY          
Sbjct: 196 LWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLY---------- 245

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 K G +  A  VFD   ++++ ++NAM+ G   N Y+  
Sbjct: 246 ---------------------AKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVE 284

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            I +F  M +L +  D +++ SVL  C   D+  L  GRQ+  +  K+     + V NA 
Sbjct: 285 AIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCL--GRQVQCVTIKNCMDASLFVANAT 342

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + M+   G + DA  +F        D +S+N ++ GL      EEA+   + M +  + P
Sbjct: 343 LDMHSKFGAIDDAKTLFNLIT--YKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTP 400

Query: 290 SELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            E++F +V++AC   R    G Q+H  AMK    +  +V ++ I  YS  G ++    + 
Sbjct: 401 DEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVL 460

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS-SGFIEMV 405
           A++    IV  N +I+   Q N    AI  + ++   G++P  FTF S+L+  +G +  +
Sbjct: 461 AQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSI 520

Query: 406 --EMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLING 461
             + +H +   +G + +   V  +L+  Y K    + A ++   M   +N++ W  +++G
Sbjct: 521 IGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSG 580

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  NG+  Q L  F  +   ++ PDE T +  L +C+ +++L  GK+IHG ++K+   S 
Sbjct: 581 YAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSY 640

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQ 580
            +  +A+I +Y+KCGD+  S   F  +  K  I+ WN++I  +A++G   EA+  F+ MQ
Sbjct: 641 KTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQ 700

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           D  +IK D+ TF  VL AC+HAGL+ +G   FDSM   YG +P  DH +C +DLLGR G+
Sbjct: 701 D-SQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGH 759

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L EA+ VIN    +     W    +AC  H +   G I A  L+E E    S YVLLSN+
Sbjct: 760 LQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSNM 819

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YAAAG W EA   RE ++  G  K PGCSWI
Sbjct: 820 YAAAGNWVEAKMAREAMREKGATKFPGCSWI 850



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 175/635 (27%), Positives = 294/635 (46%), Gaps = 54/635 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++PD + L+ TL+AC+ L     G Q H  A + GL +    A  ++++Y     +   +
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDR-------------- 152
           RVF  I  PD   W + +S   + G    A  +F +M      PDR              
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146

Query: 153 ----------DLP------VYNAMITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                      +P       +NA+I+G   ++G E    GL+++M    +     +FAS+
Sbjct: 147 RLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASM 206

Query: 196 LS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           LS   +A     GRQ+H+   + G    V V ++LI +Y  CG + DA  VF+ +     
Sbjct: 207 LSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK-- 264

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-----CPRVGYQ 309
           + + +N M++GL       EA+  F  M    L   E T+VSV+ AC      C  +G Q
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHC--LGRQ 322

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           V    +K+  +A   V+NA + M+S  G ID+A  +F  +  KD VSWN ++        
Sbjct: 323 VQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEE 382

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNA 426
              AI     M   G+ PDE +F +++ +   I   E    IH     + I +N  V ++
Sbjct: 383 DEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSS 442

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI  Y+K+  ++   ++   +   +I+  N LI G + N    + +  F ++L   L+P 
Sbjct: 443 LIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPS 502

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCG-DLDCSLRV 544
            +T S  LS C  + S   GKQ+H Y LK+  ++   S+G +++  Y K     D +  +
Sbjct: 503 SFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLL 562

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
             M   K+ + W A++S YAQ+G   +++  F  M+    + PD+ TF ++L ACS    
Sbjct: 563 IEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSY-DVHPDEVTFASILKACSEMTA 621

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           + DG  I   ++   GF   +   S ++D+  + G
Sbjct: 622 LSDGKEIHGLIIKS-GFGSYKTATSAIIDMYSKCG 655



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 265/587 (45%), Gaps = 53/587 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L  L R+ +  +A+ +F+ +     L+ D ++  + L ACA+L +   G Q+    +
Sbjct: 270 NAMLNGLVRNEYQVEAIQMFLYM-KRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTI 328

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  + A   VAN  L ++     +   K +F+ I   D  SW                  
Sbjct: 329 KNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSW------------------ 370

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                        NA++ G T N  ++  I + + M+   V  D  SFA+V++ C +   
Sbjct: 371 -------------NALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRA 417

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E G+Q+H L  K       +V ++LI  Y   G+V    KV  +        +  NV++
Sbjct: 418 TETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSI--VPRNVLI 475

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF- 319
            GL    R +EA+  F+ +L   L+PS  TF S++S C   L   +G QVH   +KSGF 
Sbjct: 476 AGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFL 535

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYL 378
              TSV  + +  Y      ++A  +   + + K++V W  ++S YAQ      ++L++ 
Sbjct: 536 NDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFW 595

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK 433
            M+S  + PDE TF S+L +    EM  +     IH  +  +G  +    ++A+I  Y+K
Sbjct: 596 RMRSYDVHPDEVTFASILKACS--EMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSK 653

Query: 434 NERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
              I  +++ F  + S ++I  WN++I GF  NG+  + L  F ++  S+++ DE T   
Sbjct: 654 CGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLG 713

Query: 493 ALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
            L +CA    +  G+     + K   ++ ++      I L  + G L  +  V N +   
Sbjct: 714 VLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFR 773

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            D + W   ++A   H   K+      A +++  ++P  ++   +LS
Sbjct: 774 PDGVIWATYLAACRMH---KDEERGEIAAKELVELEPQNSSTYVLLS 817



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 226/487 (46%), Gaps = 54/487 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L  L+ +   ++A+H+   ++    + PD  S +T + AC+N+R    G Q+H  A+
Sbjct: 371 NALLVGLTHNEEDEEAIHMLKGMNLD-GVTPDEVSFATVINACSNIRATETGKQIHCLAM 429

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  + +   V ++++  Y    D+ S ++V +++    +                     
Sbjct: 430 KHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSI--------------------- 468

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                    +P  N +I G  +N  ED  I LF+++ +  ++  +++F+S+LS C  GLL
Sbjct: 469 ---------VP-RNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC-TGLL 517

Query: 205 E--FGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH---IS 258
               G+Q+H    KSGF +   SV  +L+  Y       DA K+  E      DH   + 
Sbjct: 518 SSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMP----DHKNLVE 573

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +  ++ G A  G   ++L+ F  M    + P E+TF S++ AC        G ++H   +
Sbjct: 574 WTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLII 633

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAI 374
           KSGF +Y + ++A I MYS CG I  +   F  L+ K DI  WN+MI  +A+      A+
Sbjct: 634 KSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEAL 693

Query: 375 LAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           L + +MQ   I+ DE TF G L+A +    + E  H F  ++   GI+  +      I  
Sbjct: 694 LLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDL 753

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
             +   +++A ++ + +  R + + W T +    ++    +G     EL+  EL P   +
Sbjct: 754 LGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELV--ELEPQNSS 811

Query: 490 LSVALSS 496
             V LS+
Sbjct: 812 TYVLLSN 818



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 162/350 (46%), Gaps = 47/350 (13%)

Query: 262 MMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKS 317
           M     S   V +A +R R       +RP +    + +SAC  L   V G Q H  A K 
Sbjct: 1   MAGATTSATAVLDAFVRARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKR 60

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G  +    + A + MY+ CG++ +A  +F  +   D V W +MIS Y +    + A+  +
Sbjct: 61  GLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLF 120

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
             M+ +G  PD  T                                  A++ A     R+
Sbjct: 121 TRMEKMGSSPDRVT--------------------------------CVAVVCALTALGRL 148

Query: 438 KQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-----PDEYTLS 491
           + A  + H M +P + + WN +I+G+        G++H    L  ++R     P   T +
Sbjct: 149 EDARTLLHRMPAPSSTVAWNAVISGYAQQ----SGIEHEVFGLYKDMRCWGLWPTRSTFA 204

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             LS+ A  ++   G+Q+H   +++ L + + +G+++I LYAKCG +  ++ VF+   EK
Sbjct: 205 SMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEK 264

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           + + WNA+++   ++    EA+  F  M+ +G ++ D+ T+ +VL AC+H
Sbjct: 265 NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLG-LEADEFTYVSVLGACAH 313



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 160/346 (46%), Gaps = 55/346 (15%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           R++ A +  +S      ++  N+ +A L ++    +A+ LF Q+     LKP  ++ S+ 
Sbjct: 457 RKVLAQVDASS------IVPRNVLIAGLVQNNREDEAIDLFQQVLRD-GLKPSSFTFSSI 509

Query: 64  LAACANLRNAAFGNQLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
           L+ C  L ++  G Q+H Y L++G L     V  +++  Y  AR      ++  E     
Sbjct: 510 LSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIE----- 564

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPD-RDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                                     MPD ++L  + A+++G  +NGY    +  F  M 
Sbjct: 565 --------------------------MPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMR 598

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
             DV  D  +FAS+L  C +   L  G+++H L+ KSGF    +  +A+I MY  CG+++
Sbjct: 599 SYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDII 658

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            + + F+E K    D   +N M+ G A  G  +EAL+ F+ M  + ++  E+TF+ V+ A
Sbjct: 659 SSFEAFKELKSKQ-DITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIA 717

Query: 301 CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACMI 345
           C         HA  +  G   + S+S     +Y    ++D  AC I
Sbjct: 718 C--------AHAGLISEGRHYFDSMSK----VYGIMPRVDHYACFI 751



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 45/240 (18%)

Query: 384 GIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+RPD+F   + L++    G +   +  H      G+ +    + AL++ YA+  R+  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT---LSVALSSC 497
            ++F  +S  + + W ++I+G+   G   + +  F+ +      PD  T   +  AL++ 
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R+   R             L+ +M   ++                         T++WN
Sbjct: 146 GRLEDAR------------TLLHRMPAPSS-------------------------TVAWN 168

Query: 558 ALISAYAQH-GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           A+IS YAQ  G   E    +K M+  G + P ++TF ++LSA ++A    +G ++  + V
Sbjct: 169 AVISGYAQQSGIEHEVFGLYKDMRCWG-LWPTRSTFASMLSAAANATAFIEGRQVHAAAV 227


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 219/720 (30%), Positives = 371/720 (51%), Gaps = 38/720 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +++    + + +R G    AL  F+Q+  +  ++P+  + S T++ACA     +    LH
Sbjct: 6   VVRWTSKITDNARRGLVDQALSCFLQMLRA-GIEPNAITYSATISACAQSTRPSLATSLH 64

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L+ G      V++ ++S+Y     +   + +F ++   D  SW + ++  ++ G  +
Sbjct: 65  CLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNE 124

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            AC +F            +MI  C              E  KL V   +++ A+VL  C 
Sbjct: 125 EACGLF-----------CSMINSC--------------ENWKLLV--SDFTLATVLKACG 157

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G    G+ +H    K GF   + V  + + MY  CG +  A   F++ +    D +++
Sbjct: 158 GLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENK--DIVAW 215

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMK 316
           N M+ G A     EEA+  F  M +   +P++ TF  V+ A        VG   HA+ +K
Sbjct: 216 NTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLK 275

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G      V+ A + MYS    I++    F  + ++++VS+N +I+ Y+       A+  
Sbjct: 276 LGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRV 335

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAK 433
           Y ++QS G+ PD FTF  L +S      V     +H      G+ +++ V N++++ Y+K
Sbjct: 336 YSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSK 395

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
                 A + F +++  N + W  +I+GF  NG   + L  F ++     + DE++ S  
Sbjct: 396 CGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSV 455

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           + + +  +++  G+ +H +V+K+ L   + +G+A+I +Y+KCG ++ + +VF++M EK+ 
Sbjct: 456 IKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNV 515

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN++I+ YAQ+G  KEA+  F+ M   G I P   TF  +L ACSHAGLV++G   ++
Sbjct: 516 VSWNSMITGYAQNGFCKEALLLFQEMTSSG-ILPTAVTFVGILFACSHAGLVEEGRNFYN 574

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
            MV++YG  P+ +H +CM+DLLGRAGYL+EAE  + S         W +L SAC  H N 
Sbjct: 575 LMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNS 634

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
            +G   A   L  E    S Y  LSNIYA+  LW E + IR+L+K  GV K+PGCSWI S
Sbjct: 635 DVGSRAAQHCLFLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIES 694



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 195/418 (46%), Gaps = 42/418 (10%)

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           E ++V W + I+  A+R L   A+  +L+M   GI P+  T+ + +   A S    +   
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +   G    + VS+ LIS Y+K++RIK+A  +F +M  R+ ++WN++I G+   G 
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 468 PVQGLQHFSELLMS----ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             +    F  ++ S    +L   ++TL+  L +C  +   R GK +HGY +K    S + 
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +  + + +Y KCG LD +   F+ +  KD ++WN +I+ YAQ+   +EA+  F  M+  G
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242

Query: 584 RIKPDQATFTAVLSA-----------CSHA---------------GLVDDGTRIFD--SM 615
             KP+  TF  VL A           C HA                LVD  ++ +D   +
Sbjct: 243 -FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDV 301

Query: 616 VNDYGFIPAEDHLSCMLDLLGRA--GYLDEAERV---INSQHIQARSDNWWALFSACAAH 670
              +G +   + +S    + G +  G  +EA RV   + S+ ++  S  +  LFS+C+  
Sbjct: 302 ERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVS 361

Query: 671 GNLRLGRIIAGLLLEREQDKP-SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             +  G  +    ++   D   SV   + N Y+  G  + A    E + R   +   G
Sbjct: 362 STVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 80/160 (50%), Gaps = 3/160 (1%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M   N++ W + I      G   Q L  F ++L + + P+  T S  +S+CA+ +     
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
             +H  +LK    +++ + + +I++Y+K   +  +  +F+ M E+D +SWN++I+ Y+Q 
Sbjct: 61  TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120

Query: 567 GEGKEAVSCFKAMQDV---GRIKPDQATFTAVLSACSHAG 603
           G  +EA   F +M +     ++     T   VL AC   G
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLG 160


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  354 bits (909), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 214/722 (29%), Positives = 358/722 (49%), Gaps = 45/722 (6%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  +A LS+S    +A+  F  +     ++P   SL         L N     
Sbjct: 192 KRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLV-GVEPSSVSLLNLFPGICKLSNIELCR 250

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y  R    +   V+N ++ LY                               +K G
Sbjct: 251 SIHGYVFRRDFSSA--VSNGLIDLY-------------------------------SKCG 277

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-L 196
            VD A  VFD+M D+D   +  M+ G   NG     + LF +M   +VR +  S  S  L
Sbjct: 278 DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFL 337

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           +  +   LE G+++H    +      + V   L+ MY  CG    A ++F   +G   D 
Sbjct: 338 AAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR--DL 395

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           ++++ ++  L   G  EEAL  F++M    ++P+ +T +S++ AC      ++G  +H  
Sbjct: 396 VAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCF 455

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K+  ++  S   A ++MY+ CG    A   F R+  +DIV+WN++I+ YAQ     +A
Sbjct: 456 TVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNA 515

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           I  + +++   I PD  T   ++ +   +  ++    IH  +   G  ++  V NALI  
Sbjct: 516 IDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDM 575

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
           YAK   +  A  +F+     ++ +TWN +I  ++ NG   + +  F ++ +    P+  T
Sbjct: 576 YAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               L + A +++ R G   H  +++   +S   +GN++I +YAKCG L  S ++FN M 
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMD 695

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            KDT+SWNA++S YA HG G  A++ F  MQ+  +++ D  +F +VLSAC H GLV++G 
Sbjct: 696 HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE-SQVQIDSVSFVSVLSACRHXGLVEEGR 754

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           +IF SM + Y   P  +H +CM+DLLGRAG  DE    I    ++  +  W AL  +C  
Sbjct: 755 KIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRM 814

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H N++LG +    L++ E   P+ +V+LS+IYA +G W +A   R  +   G+ K PGCS
Sbjct: 815 HSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCS 874

Query: 730 WI 731
           W+
Sbjct: 875 WV 876



 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 203/691 (29%), Positives = 335/691 (48%), Gaps = 48/691 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RS  Y +AL ++  +     L+PD Y+ +  L AC    N   G   H    R GL+  
Sbjct: 105 TRSKQYNEALEMYYCM-VEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLE-- 161

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                         RD      VF      D+YS         KMG +  A EVFDKMP 
Sbjct: 162 --------------RD------VFIGAGLVDMYS---------KMGDLKRAREVFDKMPK 192

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQL 210
           RD+  +NAMI G +++      +  FR M  + V   + S  ++   +C    +E  R +
Sbjct: 193 RDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSI 252

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V +  FS  VS  N LI +Y  CG+V  A +VF++      D +S+  MM G A  G
Sbjct: 253 HGYVFRRDFSSAVS--NGLIDLYSKCGDVDVARRVFDQMVDQ--DDVSWGTMMAGYAHNG 308

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              E L  F  M + ++R ++++ VS   A    +    G ++H  A++   ++   V+ 
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + MY+ CG+ ++A  +F  LQ +D+V+W+ +I+   Q      A+  + EMQ+  ++P
Sbjct: 369 PLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKP 428

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  T  S+L +   + ++++   IH F     + +++    AL+S YAK      A   F
Sbjct: 429 NRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTF 488

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + MS R+I+TWN+LING+   G P   +  F +L +S + PD  T+   + +CA ++ L 
Sbjct: 489 NRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLD 548

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAY 563
            G  IHG ++K    S   + NA+I +YAKCG L  +  +FN     KD ++WN +I+AY
Sbjct: 549 QGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAY 608

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q+G  KEA+S F  M+ +    P+  TF +VL A ++     +G   F + +   GF+ 
Sbjct: 609 MQNGHAKEAISSFHQMR-LENFHPNSVTFVSVLPAAAYLAAFREGM-AFHACIIQMGFLS 666

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
                + ++D+  + G L  +E++ N       + +W A+ S  A HG+      +  L+
Sbjct: 667 NTLVGNSLIDMYAKCGQLXYSEKLFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLM 725

Query: 684 LEREQDKPSV-YVLLSNIYAAAGLWEEAANI 713
            E +    SV +V + +     GL EE   I
Sbjct: 726 QESQVQIDSVSFVSVLSACRHXGLVEEGRKI 756



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 179/685 (26%), Positives = 325/685 (47%), Gaps = 34/685 (4%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H+L+    S++T  +   +L ++ + N LH          YP     +LS  K+   L+ 
Sbjct: 5   HQLRRSFTSIATXASEFPSLSSSTYTNYLH----------YPR----LLSSCKHLNPLLQ 50

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           +            +S T  ++  +     D A  VFD  P+    ++N+MI   T +   
Sbjct: 51  IHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQY 110

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  + ++  M +  +  D Y+F  VL  C   L L+ G   H  + + G    V +   L
Sbjct: 111 NEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGL 170

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           + MY   G++  A +VF++      D +++N M+ GL+      EA+  FR M +  + P
Sbjct: 171 VDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 290 SELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           S ++ +++    +C      +   +H    +  F   ++VSN  I +YS CG +D A  +
Sbjct: 229 SSVSLLNLFPG-ICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARRV 285

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT-FGSLLASSGFIEM 404
           F ++ ++D VSW TM++ YA        +  + +M+   +R ++ +   + LA++  I++
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 405 V--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
              + IH       I ++I V+  L+  YAK    ++A Q+F  +  R+++ W+ +I   
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           +  G+P + L  F E+   +++P+  TL   L +CA +S L+ GK IH + +K ++ S +
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           S G A++++YAKCG    +L  FN M  +D ++WN+LI+ YAQ G+   A+  F  ++ +
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLR-L 524

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             I PD  T   V+ AC+    +D GT I   +V   GF       + ++D+  + G L 
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLP 583

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
            AE + N          W  + +A   +G+ +   I +   +  E   P+    +S + A
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEA-ISSFHQMRLENFHPNSVTFVSVLPA 642

Query: 703 AAGLWEEAANIRELLKRTGVIKQPG 727
           AA L    A  RE +     I Q G
Sbjct: 643 AAYL----AAFREGMAFHACIIQMG 663


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 200/626 (31%), Positives = 342/626 (54%), Gaps = 20/626 (3%)

Query: 119 QNPDVYSWTTFLSACTKM--GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           ++ D+Y+    LS  T+   G + +AC +FD+M  RD   +N MI+G   +G       L
Sbjct: 30  RSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWEL 89

Query: 177 FREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           ++ M    +  D Y+F S+L  V  A  L+ G+Q+HSL+ K G+   V   +AL+ MY  
Sbjct: 90  YKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAK 149

Query: 236 CGNVVDACKVFEEAKGYVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           C  V DA  VF+      C    + +S+N ++ G    G  + A    R M    +R  +
Sbjct: 150 CERVRDAFMVFK------CIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDD 203

Query: 292 LTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-A 347
            TF   ++++      ++  Q+H + +K G +   +V NA IT YS CG +++A  +F  
Sbjct: 204 GTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDG 263

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
            +  +D+V+WN+M++ +   +   +A   +L+MQ  G  PD +T+ +++++    +  + 
Sbjct: 264 AVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKS 323

Query: 408 IHAFVFINGIITNIQVSNALISAY--AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           +H  V   G+   + + NA+I+ Y  + +  ++ A  +FH+M  ++ ++WN+++ GF   
Sbjct: 324 LHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQT 383

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G     L+ F  +  + +  D Y  S  L SC+ +++L+ G+QIH   +K+   S   + 
Sbjct: 384 GHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVA 443

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +++I +Y+KCG ++ + + F    +  +I+WN+++ AYAQHG+G  A+  F  M+D  ++
Sbjct: 444 SSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRD-KKV 502

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           K D  TF A L+ACSH GLV+ G  +  SM +DYG  P  +H +C +DL GRAGYLDEA+
Sbjct: 503 KMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAK 562

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I S      +  W  L  AC A G++ L   +A  LLE E ++   YV+LSN+Y    
Sbjct: 563 ALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLK 622

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E A +  L++   V K PG SWI
Sbjct: 623 RWDEKACMARLMRERKVKKVPGWSWI 648



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 247/550 (44%), Gaps = 49/550 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++    SG    A  L+  +  S  L PD Y+  + L   A       G Q+H+  +
Sbjct: 71  NTMISGYVNSGSLGSAWELYKSM-KSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIV 129

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G + + +  + +L +Y                                K   V  A  
Sbjct: 130 KMGYEEHVYAGSALLDMY-------------------------------AKCERVRDAFM 158

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF  +P R+   +NA+I G    G  D    L R M +  VR D+ +F+ +L++ D    
Sbjct: 159 VFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKF 218

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            +   QLH  + K G     +V NA IT Y  CG++ DA +VF+ A G   D +++N M+
Sbjct: 219 YKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSR-DLVTWNSML 277

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
               +  R E A   F DM      P   T+ +++SAC     G  +H   +K G E   
Sbjct: 278 AAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDNGKSLHGLVIKRGLEQLV 337

Query: 324 SVSNAAITMY--SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
            + NA I MY  SS   +++A  +F  ++ KD VSWN++++ ++Q     +A+  ++ M+
Sbjct: 338 PICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMR 397

Query: 382 SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              +  D + F ++L S      +++ + IH     +G  +N  V+++LI  Y+K   I+
Sbjct: 398 FAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIE 457

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A + F   +  + ITWN+++  +  +G     L  F ++   +++ D  T   AL++C+
Sbjct: 458 DARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACS 517

Query: 499 RISSLRHGKQIHGYVLKN-----NLISKMSLGNAMITLYAKCGDLD-CSLRVFNMMIEKD 552
            I  +  G+    Y+LK+      +  +M      + L+ + G LD     + +M  + D
Sbjct: 518 HIGLVEQGR----YLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPD 573

Query: 553 TISWNALISA 562
            + W  L+ A
Sbjct: 574 AMVWKTLLGA 583



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 49/378 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  LA        + A  LF+ +      +PDIY+ +T ++AC++  N   G  LH
Sbjct: 270 LVTWNSMLAAFLAHDRKETAFKLFLDMQQ-FGFEPDIYTYTTIISACSHKDN---GKSLH 325

Query: 81  AYALRAGLKAYPHVANTILSLY--KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
              ++ GL+    + N ++++Y   ++  +     VF  +++ D  SW + L+  ++ GH
Sbjct: 326 GLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGH 385

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                                     +EN      + LF  M    V  D+Y+F++VL  
Sbjct: 386 --------------------------SEN-----ALKLFVHMRFAVVDIDHYAFSAVLRS 414

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDH 256
           C D   L+ G+Q+H L  KSGF     V ++LI MY  CG + DA K FE+ AK      
Sbjct: 415 CSDLATLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKD---SS 471

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHA 312
           I++N +M   A  G+ + AL  F  M    ++   +TFV+ ++AC    L  +  Y + +
Sbjct: 472 ITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKS 531

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGR 371
            A   G          A+ ++   G +DEA  +   +  + D + W T++   A R  G 
Sbjct: 532 MASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLG--ACRACGD 589

Query: 372 SAILAYLEMQSVGIRPDE 389
             + A +    + + P+E
Sbjct: 590 IELAAQVASHLLELEPEE 607


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 223/708 (31%), Positives = 377/708 (53%), Gaps = 43/708 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
            S++G + +AL  + ++  S K+ PD Y+  + + ACA L +A  G+ ++   L  G ++
Sbjct: 81  FSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V N ++ +Y                               ++MG +  A +VFD+MP
Sbjct: 140 DLFVGNALVDMY-------------------------------SRMGLLTRARQVFDEMP 168

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQ 209
            RDL  +N++I+G + +GY +  + ++ E+    +  D+++ +SVL +  +  +++ G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH    KSG + +V V N L+ MY       DA +VF+E    V D +SYN M+ G   +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD--VRDSVSYNTMICGYLKL 286

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
             VEE++  F + L    +P  LT  SV+ AC   R   +   ++   +K+GF   ++V 
Sbjct: 287 EMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I +Y+ CG +  A  +F  ++ KD VSWN++IS Y Q      A+  +  M  +  +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 387 PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D  T+  L++ S  +  ++    +H+    +GI  ++ VSNALI  YAK   +  + +I
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F +M   + +TWNT+I+  +  G    GLQ  +++  SE+ PD  T  V L  CA +++ 
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK+IH  +L+    S++ +GNA+I +Y+KCG L+ S RVF  M  +D ++W  +I AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +GEG++A+  F  M+  G I PD   F A++ ACSH+GLVD+G   F+ M   Y   P
Sbjct: 586 GMYGEGEKALETFADMEKSG-IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLL R+  + +AE  I +  I+  +  W ++  AC   G++     ++  +
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +E   D P   +L SN YAA   W++ + IR+ LK   + K PG SWI
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 169/673 (25%), Positives = 316/673 (46%), Gaps = 59/673 (8%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           +S  L++ +NL       ++HA  +  GL +    +  ++  Y + R+  S   VF  + 
Sbjct: 10  ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
                                         P +++ ++N++I   ++NG     +  + +
Sbjct: 67  ------------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGK 96

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           + +  V  D Y+F SV+  C AGL   E G  ++  +   GF   + V NAL+ MY   G
Sbjct: 97  LRESKVSPDKYTFPSVIKAC-AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG 155

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A +VF+E    V D +S+N ++ G +S G  EEAL  + ++  + + P   T  SV
Sbjct: 156 LLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213

Query: 298 MSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + A    L  + G  +H  A+KSG  +   V+N  + MY    +  +A  +F  +  +D 
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAF 411
           VS+NTMI  Y +  +   ++  +LE      +PD  T  S+L + G +    + + I+ +
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           +   G +    V N LI  YAK   +  A  +F++M  ++ ++WN++I+G++ +G  ++ 
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           ++ F  +++ E + D  T  + +S   R++ L+ GK +H   +K+ +   +S+ NA+I +
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG++  SL++F+ M   DT++WN +ISA  + G+    +     M+    + PD AT
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDMAT 511

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F   L  C+       G  I   ++  +G+       + ++++  + G L+ + RV    
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFER- 569

Query: 652 HIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDK--PSVYVLLSNIYAA--AG 705
              +R D   W  +  A   +G    G        + E+    P   V ++ IYA   +G
Sbjct: 570 --MSRRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624

Query: 706 LWEEAANIRELLK 718
           L +E     E +K
Sbjct: 625 LVDEGLACFEKMK 637



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/599 (24%), Positives = 273/599 (45%), Gaps = 78/599 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S  G+Y++AL ++ ++ +S  + PD +++S+ L A  NL     G  LH
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQGQGLH 230

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +AL++G+ +   V N ++++Y   R     +RVF E+   D  S+ T +    K+  V+
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            +  +F +  D+  P                                D  + +SVL  C 
Sbjct: 291 ESVRMFLENLDQFKP--------------------------------DLLTVSSVLRACG 318

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHIS 258
               L   + +++ + K+GF    +V N LI +Y  CG+++ A  VF   +   C D +S
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME---CKDTVS 375

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAM 315
           +N ++ G    G + EA+  F+ M++   +   +T+   +SV +     + G  +H+  +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           KSG     SVSNA I MY+ CG++ ++  IF+ +   D V+WNT+IS   +     + + 
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
              +M+   + PD  TF   L   AS     + + IH  +   G  + +Q+ NALI  Y+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   ++ + ++F  MS R+++TW  +I  + + G   + L+ F+++  S + PD      
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            + +C+    +  G               ++    M T Y             + MIE  
Sbjct: 616 IIYACSHSGLVDEG---------------LACFEKMKTHYK-----------IDPMIEH- 648

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              +  ++   ++  +  +A    +AM     IKPD + + +VL AC  +G ++   R+
Sbjct: 649 ---YACVVDLLSRSQKISKAEEFIQAMP----IKPDASIWASVLRACRTSGDMETAERV 700


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 217/734 (29%), Positives = 359/734 (48%), Gaps = 62/734 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G    ++ +FV +     ++ D  + +  L  C+ L + + G Q+H   +
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G       A+ +L +Y   +  V   RVF  I   +  SW+                 
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS----------------- 250

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                         A+I GC +N    + +  F+EM K++       +ASVL  C A   
Sbjct: 251 --------------AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+   KS F+    V  A + MY  C N+ DA  +F+ ++    +  SYN M+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL--NRQSYNAMI 354

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G +      +AL+ F  ++ + L   E++   V  AC   +    G Q++  A+KS   
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NAAI MY  C  + EA  +F  ++ +D VSWN +I+ + Q   G   +  ++ M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474

Query: 381 QSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               I PDEFTFGS+L   + G +     IH+ +  +G+ +N  V  +LI  Y+K   I+
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534

Query: 439 QAYQI-------------------FHNMSPRNI-ITWNTLINGFLLNGFPVQGLQHFSEL 478
           +A +I                    HN   + + ++WN++I+G+++          F+ +
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           +   + PD++T +  L +CA ++S   GKQIH  V+K  L S + + + ++ +Y+KCGDL
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             S  +F   + +D ++WNA+I  YA HG+G+EA+  F+ M  +  IKP+  TF ++L A
Sbjct: 655 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRA 713

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GL+D G   F  M  DYG  P   H S M+D+LG++G +  A  +I     +A   
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773

Query: 659 NWWALFSACAAH-GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
            W  L   C  H  N+ +       LL  +    S Y LLSN+YA AG+WE+ +++R  +
Sbjct: 774 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833

Query: 718 KRTGVIKQPGCSWI 731
           +   + K+PGCSW+
Sbjct: 834 RGFKLKKEPGCSWV 847



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 186/703 (26%), Positives = 340/703 (48%), Gaps = 53/703 (7%)

Query: 57  IYSLSTT-----LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           + S+STT        CA       G Q HA+ + +G +    V N +L +Y N+RD VS 
Sbjct: 43  VNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA 102

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             VF ++   DV SW   ++  +K   +  A   F+ MP RD+  +N+M++G  +NG   
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNA 228
             I +F +M +  +  D  +FA +L VC    LE    G Q+H +V + G    V   +A
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY      V++ +VF+       + +S++ ++ G      +  AL  F++M   +  
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278

Query: 289 PSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            S+  + SV+ +C      R+G Q+HA A+KS F A   V  A + MY+ C  + +A ++
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F   +  +  S+N MI+ Y+Q   G  A+L +  + S G+  DE +   +  +   ++ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398

Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                I+     + +  ++ V+NA I  Y K + + +A+++F  M  R+ ++WN +I   
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             NG   + L  F  +L S + PDE+T    L +C    SL +G +IH  ++K+ + S  
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNS 517

Query: 523 SLGNAMITLYAKCGDLDCSLRV--------------------FNMMIEKDTISWNALISA 562
           S+G ++I +Y+KCG ++ + ++                     N  +++  +SWN++IS 
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y    + ++A   F  M ++G I PD+ T+  VL  C++      G +I   ++     +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--L 634

Query: 623 PAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            ++ ++ S ++D+  + G L ++ R++  + ++     W A+    A HG        A 
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEE----AI 689

Query: 682 LLLER---EQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKR 719
            L ER   E  KP+    +S + A A  GL ++      ++KR
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 8/181 (4%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           +E+ +  N  ++        +DA  LF ++     + PD ++ +T L  CANL +A  G 
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMME-MGITPDKFTYATVLDTCANLASAGLGK 623

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+HA  ++  L++  ++ +T++ +Y    DL   + +F +    D  +W   +      G
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNY 190
             + A ++F++M   ++      + +++  C   G  D G+  F  M +   LD +  +Y
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743

Query: 191 S 191
           S
Sbjct: 744 S 744



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 40/242 (16%)

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
           V    +F++ L           S     CA+  +L  GKQ H +++ +       + N +
Sbjct: 30  VPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCL 89

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ-------- 580
           + +Y    D   +  VF+ M  +D +SWN +I+ Y++  +  +A S F  M         
Sbjct: 90  LQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWN 149

Query: 581 --------------------DVGR--IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN- 617
                               D+GR  I+ D  TF  +L  CS       G +I   +V  
Sbjct: 150 SMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV 209

Query: 618 --DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACAAHGNLR 674
             D   + A    S +LD+  +     E+ RV   Q I +  S +W A+ + C  +  L 
Sbjct: 210 GCDTDVVAA----SALLDMYAKGKRFVESLRVF--QGIPEKNSVSWSAIIAGCVQNNLLS 263

Query: 675 LG 676
           L 
Sbjct: 264 LA 265


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 224/753 (29%), Positives = 373/753 (49%), Gaps = 57/753 (7%)

Query: 32   SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
            S  G+ Q+ LHLF  + +S      + +L+  L  C N         +H YA++ GL+  
Sbjct: 703  SNDGNAQEGLHLFRLLRASLGSTTRM-TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWD 761

Query: 92   PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
              V+  ++++Y     +   + +F  ++  DV  W   L    ++G    A ++F +   
Sbjct: 762  VFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHR 821

Query: 150  ----PDR---------------------------------------DLPVYNAMITGCTE 166
                PD                                        D+  +N  ++ C  
Sbjct: 822  SGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLW 881

Query: 167  NGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSV 225
             G     I  F  M+ L++  D  +   VL+ V     LE G+Q+H +  KSG    VSV
Sbjct: 882  AGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSV 941

Query: 226  VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
             N+L+ MY   G    A +VF + K    D IS+N M+   A     EE++  F D+L  
Sbjct: 942  ANSLVNMYSKMGCAYFAREVFNDMKH--LDLISWNSMISSCAQSSLEEESVNLFIDLLHE 999

Query: 286  SLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             L+P   T  SV+ AC        +  Q+H  A+K+G  A + V+   I +YS  GK++E
Sbjct: 1000 GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEE 1059

Query: 342  ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG- 400
            A  +F    + D+  WN M+  Y   N G+ A+  +  +   G + D+ T  +   + G 
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGC 1119

Query: 401  --FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
               ++  + IHA     G  +++ V++ ++  Y K   +  A  +F+ +S  + + W ++
Sbjct: 1120 LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSM 1179

Query: 459  INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
            I+G + NG   Q L+ +  +  S + PDEYT +  + + + +++L  G+Q+H  V+K + 
Sbjct: 1180 ISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDC 1239

Query: 519  ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            +S   +G +++ +YAKCG+++ + R+F  M  ++   WNA++   AQHG  +EAV+ FK+
Sbjct: 1240 VSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKS 1299

Query: 579  MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
            M+  G I+PD+ +F  +LSACSHAGL  +      SM NDYG  P  +H SC++D LGRA
Sbjct: 1300 MKSHG-IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 1358

Query: 639  GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
            G + EA++VI +   +A +    AL  AC   G++  G+ +A  L   E    + YVLLS
Sbjct: 1359 GLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLS 1418

Query: 699  NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            NIYAAA  W++  + R+++KR  V K PG SWI
Sbjct: 1419 NIYAAANRWDDVTDARKMMKRKNVKKDPGFSWI 1451



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 217/455 (47%), Gaps = 43/455 (9%)

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            L  G+  H+ +  SG +    + N L+TMY  CG++  A +VF+       D +++N ++
Sbjct: 637  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER--DLVTWNAIL 694

Query: 264  DGLASV-----GRVEEALIRFRDMLVASL-RPSELTFVSVMSACL---CPRVGYQVHAQA 314
               A+      G  +E L  FR +L ASL   + +T   V+  CL   C      VH  A
Sbjct: 695  GAYAASVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYA 753

Query: 315  MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
            +K G E    VS A + +YS CG++ +A ++F  ++E+D+V WN M+  Y Q  L + A 
Sbjct: 754  IKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAF 813

Query: 375  LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
              + E    G+RPDEF+   +L     +   E         G     QV           
Sbjct: 814  QLFSEFHRSGLRPDEFSVQLILNGVSEVNWDE---------GKWLADQV----------- 853

Query: 435  ERIKQAYQIFHNMSPRN--IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
                QAY    ++S  N  +  WN  ++  L  G     ++ F  +    +  D  TL V
Sbjct: 854  ----QAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLV 909

Query: 493  ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
             L++ A    L  GKQ+HG  +K+ L S +S+ N+++ +Y+K G    +  VFN M   D
Sbjct: 910  VLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLD 969

Query: 553  TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD--DGTR 610
             ISWN++IS+ AQ    +E+V+ F  +   G +KPD  T  +VL ACS   L+D  + +R
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEG-LKPDHFTLASVLRACS--SLIDGLNISR 1026

Query: 611  IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
                     G I      + ++D+  ++G ++EAE
Sbjct: 1027 QIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAE 1061



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 263/609 (43%), Gaps = 64/609 (10%)

Query: 72   NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
            N   G   HA  + +G      ++N +L++Y     L S ++VF      D+ +W   L 
Sbjct: 636  NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 695

Query: 132  ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
            A        YA  V                   + +G    G+ LFR +          +
Sbjct: 696  A--------YAASV------------------DSNDGNAQEGLHLFRLLRASLGSTTRMT 729

Query: 192  FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
             A VL +C ++G L     +H    K G    V V  AL+ +Y  CG + DA  +F+  +
Sbjct: 730  LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 789

Query: 251  GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
                D + +N+M+ G   +G  +EA   F +   + LRP E +   +++      V +  
Sbjct: 790  ER--DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG--VSEVNWD- 844

Query: 311  HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST--YAQRN 368
              + +    +AY                   A  +       D+  WN  +S   +A  N
Sbjct: 845  EGKWLADQVQAY-------------------AAKLSLSDDNPDVFCWNKKLSECLWAGDN 885

Query: 369  LGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSN 425
             G  AI  ++ M  + I  D  T   +LA+   +  +E+ + +H     +G+ +++ V+N
Sbjct: 886  WG--AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVAN 943

Query: 426  ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            +L++ Y+K      A ++F++M   ++I+WN++I+    +    + +  F +LL   L+P
Sbjct: 944  SLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKP 1003

Query: 486  DEYTLSVALSSCAR-ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            D +TL+  L +C+  I  L   +QIH + LK   I+   +   +I +Y+K G ++ +  +
Sbjct: 1004 DHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFL 1063

Query: 545  FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
            F    + D   WNA++  Y    +GK+A+  F  +   G  K DQ T      AC    L
Sbjct: 1064 FQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGE-KSDQITLATAAKACGCLVL 1122

Query: 605  VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWAL 663
            +D G +I    +   GF       S +LD+  + G +  A  V N  +I A  D  W ++
Sbjct: 1123 LDQGKQIHAHAIK-AGFDSDLHVNSGILDMYIKCGDMVNAGIVFN--YISAPDDVAWTSM 1179

Query: 664  FSACAAHGN 672
             S C  +GN
Sbjct: 1180 ISGCVDNGN 1188



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 218/463 (47%), Gaps = 53/463 (11%)

Query: 21   LLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNA-AFGNQ 78
            L+  N  +++ ++S   +++++LF+ + H    LKPD ++L++ L AC++L +      Q
Sbjct: 970  LISWNSMISSCAQSSLEEESVNLFIDLLHEG--LKPDHFTLASVLRACSSLIDGLNISRQ 1027

Query: 79   LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
            +H +AL+ G  A   VA T++                      DVYS         K G 
Sbjct: 1028 IHVHALKTGNIADSFVATTLI----------------------DVYS---------KSGK 1056

Query: 139  VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            ++ A  +F    D DL  +NAM+ G          + LF  +HK   + D  + A+    
Sbjct: 1057 MEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKA 1116

Query: 199  CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC--D 255
            C    LL+ G+Q+H+   K+GF   + V + ++ MY  CG++V+A  VF     Y+   D
Sbjct: 1117 CGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN----YISAPD 1172

Query: 256  HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHA 312
             +++  M+ G    G  ++AL  +  M  + + P E TF +++ A  C      G Q+HA
Sbjct: 1173 DVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHA 1232

Query: 313  QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
              +K    +   V  + + MY+ CG I++A  +F ++  ++I  WN M+   AQ      
Sbjct: 1233 NVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEE 1292

Query: 373  AILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALI 428
            A+  +  M+S GI PD  +F  +L++   +G   E  E +H+     GI   I+  + L+
Sbjct: 1293 AVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLV 1352

Query: 429  SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
             A  +   +++A ++   M  +   +    IN  LL    +QG
Sbjct: 1353 DALGRAGLVQEADKVIETMPFKASAS----INRALLGACRIQG 1391



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 178/415 (42%), Gaps = 49/415 (11%)

Query: 306  VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            +G   HA+ + SG      +SN  +TMYS CG +  A  +F    E+D+V+WN ++  YA
Sbjct: 639  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 366  QR------NLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFING 416
                    N      L  L   S+G      T   +L    +SG +   E +H +    G
Sbjct: 699  ASVDSNDGNAQEGLHLFRLLRASLG-STTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIG 757

Query: 417  IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
            +  ++ VS AL++ Y+K  R++ A  +F  M  R+++ WN ++ G++  G   +  Q FS
Sbjct: 758  LEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFS 817

Query: 477  ELLMSELRPDEYTLSVALSSCARISSLRHGK----QIHGYVLKNNLISKMSLGNAMITLY 532
            E   S LRPDE+++ + L+  + + +   GK    Q+  Y       +K+SL +      
Sbjct: 818  EFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYA------AKLSLSDD----- 865

Query: 533  AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
                               D   WN  +S     G+   A+ CF  M  +  I  D  T 
Sbjct: 866  -----------------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGL-NIDYDAVTL 907

Query: 593  TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS-Q 651
              VL+A +    ++ G ++    V   G        + ++++  + G    A  V N  +
Sbjct: 908  LVVLAAVAGTDDLELGKQVHGIAVKS-GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK 966

Query: 652  HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            H+   S  W ++ S+C A  +L    +   + L  E  KP  + L S + A + L
Sbjct: 967  HLDLIS--WNSMISSC-AQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSL 1018


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 215/712 (30%), Positives = 375/712 (52%), Gaps = 44/712 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+   ++G  ++AL +F ++     +K + ++  + L AC+  R+   G ++H  A+  G
Sbjct: 54  LSGYVQNGFVEEALLVFNEM-CLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTG 112

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   VANT++ +Y     L   +R+F  I   +V SW    S           C V  
Sbjct: 113 FESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFS-----------CYVQS 161

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-- 205
           ++              C E       +GLF+EM +  +  + +S + +L+ C AGL E  
Sbjct: 162 EL--------------CGE------AVGLFKEMVRSGIMPNEFSISIILNAC-AGLQEGD 200

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR++H L+ K G        NAL+ MY   G +  A  VF++      D +S+N ++ G
Sbjct: 201 LGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHP--DVVSWNAIIAG 258

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAY 322
                  + AL+   +M  +  RP+  T  S + AC       +G Q+H+  +K    + 
Sbjct: 259 CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSD 318

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
              +   + MYS C  +D+A   +  + +KDI++WN +IS Y+Q      A+  + +M S
Sbjct: 319 LFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFS 378

Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             I  ++ T  ++L   AS   I++ + IH     +GI ++  V N+L+  Y K   I +
Sbjct: 379 EDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDE 438

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A +IF   +  +++ + ++I  +   G   + L+ + ++  ++++PD +  S  L++CA 
Sbjct: 439 ASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACAN 498

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +S+   GKQ+H + +K   +  +   N+++ +YAKCG ++ + R F+ +  +  +SW+A+
Sbjct: 499 LSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAM 558

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  YAQHG GKEA+  F  M   G + P+  T  +VL AC+HAGLV++G + F+ M   +
Sbjct: 559 IGGYAQHGHGKEALRLFNQMLRDG-VPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMF 617

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P ++H +CM+DLLGR+G L+EA  ++NS   +A    W AL  A   H N+ LG+  
Sbjct: 618 GIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKA 677

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A +L + E +K   +VLL+NIYA+AG+WE  A +R+ +K + V K+PG SWI
Sbjct: 678 AKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWI 729



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 244/451 (54%), Gaps = 14/451 (3%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           +LH+ + K GFS   S+ N L+T+Y  C     A K+ +E+     D +S++ ++ G   
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSEL--DVVSWSSLLSGYVQ 59

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G VEEAL+ F +M +  ++ +E TF SV+ AC   R   +G +VH  A+ +GFE+   V
Sbjct: 60  NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFV 119

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +N  + MY+ CG +D++  +F  + E+++VSWN + S Y Q  L   A+  + EM   GI
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179

Query: 386 RPDEFTFGSLL-ASSGFIE--MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P+EF+   +L A +G  E  +   IH  +   G+  +   +NAL+  Y+K   I+ A  
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVA 239

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F +++  ++++WN +I G +L+      L    E+  S  RP+ +TLS AL +CA +  
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+Q+H  ++K +  S +     ++ +Y+KC  +D + R ++ M +KD I+WNALIS 
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359

Query: 563 YAQHGEGKEAVSCFKAM--QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           Y+Q G+  +AVS F  M  +D   I  +Q T + VL + +    +    +I    +   G
Sbjct: 360 YSQCGDHLDAVSLFSKMFSED---IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-G 415

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
                  ++ +LD  G+  ++DEA ++   +
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEER 446



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 159/304 (52%), Gaps = 14/304 (4%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA +   G   +  + N L++ Y+K  R   A ++    S  ++++W++L++G++ NGF
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L  F+E+ +  ++ +E+T    L +C+    L  G+++HG  +     S   + N 
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YAKCG LD S R+F  ++E++ +SWNAL S Y Q     EAV  FK M   G I P
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG-IMP 181

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           ++ + + +L+AC+     D G +I   M+   G    +   + ++D+  +AG ++ A  V
Sbjct: 182 NEFSISIILNACAGLQEGDLGRKIHGLMLK-MGLDLDQFSANALVDMYSKAGEIEGAVAV 240

Query: 648 INSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQ---DKPSVYVLLSNIYA 702
              Q I A  D  +W A+ + C  H    L    A +LL+  +    +P+++ L S + A
Sbjct: 241 F--QDI-AHPDVVSWNAIIAGCVLHDCNDL----ALMLLDEMKGSGTRPNMFTLSSALKA 293

Query: 703 AAGL 706
            A +
Sbjct: 294 CAAM 297


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 217/734 (29%), Positives = 359/734 (48%), Gaps = 62/734 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G    ++ +FV +     ++ D  + +  L  C+ L + + G Q+H   +
Sbjct: 107 NSMLSGYLQNGESLKSIEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 165

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G       A+ +L +Y   +  V   RVF  I   +  SW+                 
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS----------------- 208

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                         A+I GC +N    + +  F+EM K++       +ASVL  C A   
Sbjct: 209 --------------AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+   KS F+    V  A + MY  C N+ DA  +F+ ++    +  SYN M+
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL--NRQSYNAMI 312

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G +      +AL+ F  ++ + L   E++   V  AC   +    G Q++  A+KS   
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 372

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NAAI MY  C  + EA  +F  ++ +D VSWN +I+ + Q   G   +  ++ M
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 432

Query: 381 QSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               I PDEFTFGS+L   + G +     IH+ +  +G+ +N  V  +LI  Y+K   I+
Sbjct: 433 LRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 492

Query: 439 QAYQI-------------------FHNMSPRNI-ITWNTLINGFLLNGFPVQGLQHFSEL 478
           +A +I                    HN   + + ++WN++I+G+++          F+ +
Sbjct: 493 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           +   + PD++T +  L +CA ++S   GKQIH  V+K  L S + + + ++ +Y+KCGDL
Sbjct: 553 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 612

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             S  +F   + +D ++WNA+I  YA HG+G+EA+  F+ M  +  IKP+  TF ++L A
Sbjct: 613 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRA 671

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GL+D G   F  M  DYG  P   H S M+D+LG++G +  A  +I     +A   
Sbjct: 672 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 731

Query: 659 NWWALFSACAAH-GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
            W  L   C  H  N+ +       LL  +    S Y LLSN+YA AG+WE+ +++R  +
Sbjct: 732 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 791

Query: 718 KRTGVIKQPGCSWI 731
           +   + K+PGCSW+
Sbjct: 792 RGFKLKKEPGCSWV 805



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 183/693 (26%), Positives = 335/693 (48%), Gaps = 48/693 (6%)

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           T    CA       G Q HA+ + +G +    V N +L +Y N+RD VS   VF ++   
Sbjct: 11  TRSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR 70

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV SW   ++  +K   +  A   F+ MP RD+  +N+M++G  +NG     I +F +M 
Sbjct: 71  DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 130

Query: 182 KLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           +  +  D  +FA +L VC    LE    G Q+H +V + G    V   +AL+ MY     
Sbjct: 131 REGIEFDGRTFAIILKVC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
            V++ +VF+       + +S++ ++ G      +  AL  F++M   +   S+  + SV+
Sbjct: 189 FVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 246

Query: 299 SACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
            +C      R+G Q+HA A+KS F A   V  A + MY+ C  + +A ++F   +  +  
Sbjct: 247 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 306

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFV 412
           S+N MI+ Y+Q   G  A+L +  + S G+  DE +   +  +   ++ +     I+   
Sbjct: 307 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 366

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             + +  ++ V+NA I  Y K + + +A+++F  M  R+ ++WN +I     NG   + L
Sbjct: 367 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 426

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F  +L S + PDE+T    L +C    SL +G +IH  ++K+ + S  S+G ++I +Y
Sbjct: 427 FLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMY 485

Query: 533 AKCGDLDCSLRV--------------------FNMMIEKDTISWNALISAYAQHGEGKEA 572
           +KCG ++ + ++                     N  +++  +SWN++IS Y    + ++A
Sbjct: 486 SKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDA 545

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCM 631
              F  M ++G I PD+ T+  VL  C++      G +I   ++     + ++ ++ S +
Sbjct: 546 QMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYICSTL 602

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER---EQ 688
           +D+  + G L ++ R++  + ++     W A+    A HG        A  L ER   E 
Sbjct: 603 VDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEE----AIQLFERMILEN 657

Query: 689 DKPSVYVLLSNIYAAA--GLWEEAANIRELLKR 719
            KP+    +S + A A  GL ++      ++KR
Sbjct: 658 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 690



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 8/181 (4%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           +E+ +  N  ++        +DA  LF ++     + PD ++ +T L  CANL +A  G 
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMME-MGITPDKFTYATVLDTCANLASAGLGK 581

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+HA  ++  L++  ++ +T++ +Y    DL   + +F +    D  +W   +      G
Sbjct: 582 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 641

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNY 190
             + A ++F++M   ++      + +++  C   G  D G+  F  M +   LD +  +Y
Sbjct: 642 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 701

Query: 191 S 191
           S
Sbjct: 702 S 702


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 218/612 (35%), Positives = 332/612 (54%), Gaps = 16/612 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRR 187
           FL+   + G++  A  VF KM +R+L  +N ++ G  + GY D  + L+  M  +  V+ 
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194

Query: 188 DNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           D Y+F  VL  C  G+  L  G+++H  V + G+   + VVNALITMY  CG+V  A  +
Sbjct: 195 DVYTFPCVLRTC-GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F+       D IS+N M+ G    G   E L  F  M   S+ P  +T  SV+SAC    
Sbjct: 254 FDRMPRR--DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G  +HA  + +GF    SV N+   MY + G   EA  +F+R++ KDIVSW TMIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            Y    L   AI  Y  M    ++PDE T  ++L   A+ G ++    +H       +I+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            + V+N LI+ Y+K + I +A  IFHN+  +N+I+W ++I G  LN    + L    ++ 
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           M+ L+P+  TL+ AL++CARI +L  GK+IH +VL+  +     L NA++ +Y +CG ++
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +   FN   +KD  SWN L++ Y++ G+G   V  F  M    R++PD+ TF ++L  C
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGC 608

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           S + +V  G   F  M  DYG  P   H +C++DLLGRAG L EA + I    +      
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W AL +AC  H  + LG + A  + E ++     Y+LL N+YA  G W E A +R ++K 
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 720 TGVIKQPGCSWI 731
            G+    GCSW+
Sbjct: 728 NGLTVDAGCSWV 739



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 151/522 (28%), Positives = 261/522 (50%), Gaps = 23/522 (4%)

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSC 221
           G   NG  +  + L   M +L V  D   F +++ +C+     E G +++S+   S  S 
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            V + NA + M+   GN+VDA  VF   K    +  S+NV++ G A  G  +EA+  +  
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVF--GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185

Query: 282 ML-VASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
           ML V  ++P   TF  V+  C   P +  G +VH   ++ G+E    V NA ITMY  CG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
            +  A ++F R+  +DI+SWN MIS Y +  +    +  +  M+ + + PD  T  S+++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305

Query: 398 SSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           +   +    +   IHA+V   G   +I V N+L   Y      ++A ++F  M  ++I++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W T+I+G+  N  P + +  +  +    ++PDE T++  LS+CA +  L  G ++H   +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           K  LIS + + N +I +Y+KC  +D +L +F+ +  K+ ISW ++I+    +    EA+ 
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI----FDSMVNDYGFIPAEDHLSC 630
             + M+    ++P+  T TA L+AC+  G +  G  I      + V    F+P     + 
Sbjct: 486 FLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-----NA 538

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +LD+  R G ++ A    NSQ     S  W  L +  +  G 
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLTGYSERGQ 578



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 262/558 (46%), Gaps = 43/558 (7%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  L   N+ +   ++ G++ +A+ L+ ++     +KPD+Y+    L  C  + + A G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++H + +R G +    V N ++++Y    D+ S + +F  +   D+ SW          
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW---------- 265

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                NAMI+G  ENG    G+ LF  M  L V  D  +  SV+
Sbjct: 266 ---------------------NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C+  G    GR +H+ V  +GF+  +SV N+L  MY N G+  +A K+F   +    D
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK--D 362

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            +S+  M+ G       ++A+  +R M   S++P E+T  +V+SAC        G ++H 
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K+   +Y  V+N  I MYS C  ID+A  IF  +  K+++SW ++I+     N    
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A++ +L    + ++P+  T  + LA+    G +   + IHA V   G+  +  + NAL+ 
Sbjct: 483 ALI-FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y +  R+  A+  F N   +++ +WN L+ G+   G     ++ F  ++ S +RPDE T
Sbjct: 542 MYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
               L  C++   +R G      +    +   +     ++ L  + G+L  + +    M 
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660

Query: 549 IEKDTISWNALISAYAQH 566
           +  D   W AL++A   H
Sbjct: 661 VTPDPAVWGALLNACRIH 678


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 225/709 (31%), Positives = 357/709 (50%), Gaps = 43/709 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS +G+ ++AL  + Q+     +  +  + +T ++ C +L N   G Q+ +  + +GL+ 
Sbjct: 120 LSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              VAN++++++ N                               +G V  A ++FD+M 
Sbjct: 179 QVSVANSLITMFGN-------------------------------LGRVHDAEKLFDRME 207

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           + D   +NAMI+  +  G       +F +M    +R D  +  S++SVC  +     G  
Sbjct: 208 EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSG 267

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +HSL  +S     V+V+NAL+ MY   G + DA  +F        D IS+N M+      
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR--DLISWNTMISSYVQN 325

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
               +AL     +   +  P+ LTF S + AC  P     G  VHA  ++   +    V 
Sbjct: 326 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N+ ITMY  C  +++A  +F  +   DIVS+N +I  YA    G  A+  +  M+S GI+
Sbjct: 386 NSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIK 445

Query: 387 PDEFTF----GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  T     GS  +S+        +HA++   G +++  V+N+LI+ YAK   ++ +  
Sbjct: 446 PNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTN 505

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF++++ +NI++WN +I   +  G   + L+ F ++  +  + D   L+  LSSCA ++S
Sbjct: 506 IFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLAS 565

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  G Q+HG  +K+ L S   + NA + +Y KCG +D  L+V      +    WN LIS 
Sbjct: 566 LEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISG 625

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA++G  KEA   FK M   GR KPD  TF A+LSACSHAGLVD G   ++SM + +G  
Sbjct: 626 YAKYGYFKEAEETFKQMVATGR-KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVS 684

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P   H  C++DLLGR G   EAE+ I    +      W +L S+   H NL +GR  A  
Sbjct: 685 PGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKK 744

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE +    S YVLLSN+YA    W +   +R  +K   + K+P CSW+
Sbjct: 745 LLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWL 793



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 187/631 (29%), Positives = 318/631 (50%), Gaps = 53/631 (8%)

Query: 58  YSLSTTLAACANL---RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS-VKR 113
           ++L++ + AC         A G  +HA   RAGL    ++   +L LY  +R +VS  +R
Sbjct: 42  FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLY-GSRGIVSDAQR 100

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +F E+   +V SWT  + A +  G+++ A   + +M    +P        C  N      
Sbjct: 101 LFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVP--------CNAN------ 146

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALI 230
                            +FA+V+S+C  G LE    G Q+ S V  SG    VSV N+LI
Sbjct: 147 -----------------AFATVVSLC--GSLENEVPGLQVASQVIVSGLQNQVSVANSLI 187

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TM+ N G V DA K+F+  + +  D IS+N M+   +  G   +  + F DM    LRP 
Sbjct: 188 TMFGNLGRVHDAEKLFDRMEEH--DTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 245

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             T  S+MS C        G  +H+  ++S  ++  +V NA + MYS+ GK+ +A  +F 
Sbjct: 246 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            +  +D++SWNTMIS+Y Q      A+    ++      P+  TF S L   +S G +  
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 365

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +M+HA V    +  N+ V N+LI+ Y K   ++ A ++F +M   +I+++N LI G+ +
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 425

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMS 523
                + +Q FS +  + ++P+  T+     S A  + L  +G+ +H Y+++   +S   
Sbjct: 426 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 485

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + N++IT+YAKCG+L+ S  +FN +  K+ +SWNA+I+A  Q G G+EA+  F  MQ  G
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 545

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             K D+      LS+C+    +++G ++   +    G       ++  +D+ G+ G +DE
Sbjct: 546 N-KLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 603

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLR 674
             +V+  Q I+ +   W  L S  A +G  +
Sbjct: 604 MLQVVPDQAIRPQ-QCWNTLISGYAKYGYFK 633



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 267/513 (52%), Gaps = 15/513 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-----DAGL 203
           M DR    +   ++GC   G +     + R M +  V    ++ AS+++ C     D G 
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEG- 59

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G  +H+L  ++G    V +  AL+ +Y + G V DA ++F E      + +S+  +M
Sbjct: 60  IACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER--NVVSWTALM 117

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGFE 320
             L+S G +EEAL  +R M    +  +   F +V+S C  L   V G QV +Q + SG +
Sbjct: 118 VALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQ 177

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              SV+N+ ITM+ + G++ +A  +F R++E D +SWN MIS Y+ + +     L + +M
Sbjct: 178 NQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDM 237

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+RPD  T  SL+   ASS        IH+    + + +++ V NAL++ Y+   ++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  +F NMS R++I+WNT+I+ ++ N      L+   +L  +   P+  T S AL +C
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 357

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +   +L  GK +H  VL+ +L   + +GN++IT+Y KC  ++ + +VF  M   D +S+N
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 417

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LI  YA   +G +A+  F  M+  G IKP+  T   +  + + +  + +  R   + + 
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWMRSAG-IKPNYITMINIHGSFASSNDLHNYGRPLHAYII 476

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             GF+  E   + ++ +  + G L+ +  + NS
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/615 (33%), Positives = 334/615 (54%), Gaps = 23/615 (3%)

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           C ++G   +A ++FD+MP+R++  +N++I+G T+ G+ +  + LF E    +++ D +++
Sbjct: 96  CRELG---FARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTY 152

Query: 193 ASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           A  L  C     L+FG+ LH LV  +G S  V ++N LI MY  CG +  A  +F+    
Sbjct: 153 AGALGFCGERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNE 212

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV----- 306
              D +S+N ++ G   VG  EE L     M  A L+ +     SV+ AC C  +     
Sbjct: 213 R--DQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKAC-CINLNEGLM 269

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H  A K G E    V  A + MY+  G + EA  +F+ +  K++V++N MIS +
Sbjct: 270 EKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGF 329

Query: 365 AQRN-----LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
            Q +         A   ++EMQ  G+ P   TF  +L   +++  +E    IHA +  N 
Sbjct: 330 LQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 389

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++  + +ALI  YA     +   Q F + S ++I +W ++I+  + N         F 
Sbjct: 390 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFR 449

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +L  S +RP+EYT+S+ +S+CA  ++L  G+QI GY +K+ + +  S+  + I++YAK G
Sbjct: 450 QLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSG 509

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           ++  + +VF  +   D  +++A+IS+ AQHG   +A++ F++M+  G IKP+Q  F  VL
Sbjct: 510 NMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRG-IKPNQQAFLGVL 568

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            AC H GLV  G   F +M N YG  P E H +C+ DLLGR G L +AE +I S   Q  
Sbjct: 569 IACCHGGLVTHGVNYFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDH 628

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              W AL S+C  + +  +G+ +A  L+E E +    YVLL NIY  +G+   A  +REL
Sbjct: 629 PVMWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 688

Query: 717 LKRTGVIKQPGCSWI 731
           ++  GV K+P  SWI
Sbjct: 689 MRDRGVKKEPALSWI 703



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 213/503 (42%), Gaps = 53/503 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  ++ G Y+ A+ LF++    + LK D ++ +  L  C    +  FG  LH
Sbjct: 114 IISFNSLISGYTQVGFYEQAMELFLEARDDN-LKLDKFTYAGALGFCGERCDLDFGKLLH 172

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +  GL     + N ++ +Y     L     +F      D  SW + +S   ++G  +
Sbjct: 173 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAE 232

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                                            + L  +MH+  ++   Y+  SVL  C 
Sbjct: 233 EP-------------------------------LNLLAKMHRAGLKLTTYALGSVLKACC 261

Query: 200 ---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVC 254
              + GL+E G  +H    K G    + V  AL+ MY   G++ +A K+F    AK  V 
Sbjct: 262 INLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVV- 320

Query: 255 DHISYNVMMDGLASVGRV-----EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV--- 306
              +YN M+ G   +  +      EA   F +M    L PS  TF  V+ AC   +    
Sbjct: 321 ---TYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEY 377

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+HA   K+ F++   + +A I +Y+  G  ++    FA   ++DI SW ++I  + Q
Sbjct: 378 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQ 437

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQV 423
                SA   + ++ S  IRP+E+T   ++ A + F  +   E I  +   +GI     V
Sbjct: 438 NEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSV 497

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             + IS YAK+  +  A ++F  +   ++ T++ +I+    +G     L  F  +    +
Sbjct: 498 KTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGI 557

Query: 484 RPDEYTLSVALSSCARISSLRHG 506
           +P++      L +C     + HG
Sbjct: 558 KPNQQAFLGVLIACCHGGLVTHG 580



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 164/317 (51%), Gaps = 12/317 (3%)

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G   H   +KS       + N  + MY  C ++  A  +F R+ E++I+S+N++IS Y 
Sbjct: 66  LGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 125

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQ 422
           Q      A+  +LE +   ++ D+FT+   L   G    ++  +++H  V +NG+   + 
Sbjct: 126 QVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQVF 185

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           + N LI  Y+K  ++ QA  +F   + R+ ++WN+LI+G++  G   + L   +++  + 
Sbjct: 186 LINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAG 245

Query: 483 LRPDEYTLSVALSSCA---RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           L+   Y L   L +C        +  G  IH Y  K  +   + +  A++ +YAK G L 
Sbjct: 246 LKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLK 305

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGE-----GKEAVSCFKAMQDVGRIKPDQATFTA 594
            ++++F++M  K+ +++NA+IS + Q  +       EA   F  MQ  G ++P  +TF+ 
Sbjct: 306 EAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRG-LEPSPSTFSV 364

Query: 595 VLSACSHAGLVDDGTRI 611
           VL ACS A  ++ G +I
Sbjct: 365 VLKACSAAKTLEYGRQI 381



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 25/266 (9%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A SG + + ++ H  +  + +   + + N L++ Y K   +  A Q+F  M  RNII++N
Sbjct: 59  AKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 118

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           +LI+G+   GF  Q ++ F E     L+ D++T + AL  C     L  GK +HG V+ N
Sbjct: 119 SLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVN 178

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L  ++ L N +I +Y+KCG LD ++ +F+   E+D +SWN+LIS Y + G  +E ++  
Sbjct: 179 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLL 238

Query: 577 KAMQDVGRIKPDQATFTAVLSACS---HAGLVDDGTRI----------FDSMVNDYGFIP 623
             M   G +K       +VL AC    + GL++ G  I          FD +V       
Sbjct: 239 AKMHRAG-LKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVR------ 291

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVIN 649
                + +LD+  + G L EA ++ +
Sbjct: 292 -----TALLDMYAKNGSLKEAIKLFS 312



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 79/147 (53%), Gaps = 5/147 (3%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           + A  LF Q+ SS  ++P+ Y++S  ++ACA+    + G Q+  YA+++G+ AY  V  +
Sbjct: 442 ESAFDLFRQLFSS-PIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTS 500

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP-- 155
            +S+Y  + ++    +VF E+QNPDV +++  +S+  + G    A  +F+ M  R +   
Sbjct: 501 SISMYAKSGNMPLANKVFIEVQNPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPN 560

Query: 156 --VYNAMITGCTENGYEDIGIGLFREM 180
              +  ++  C   G    G+  F+ M
Sbjct: 561 QQAFLGVLIACCHGGLVTHGVNYFQTM 587



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 2/151 (1%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
             + A+  SL  GK  HG+++K++L   + L N ++ +Y KC +L  + ++F+ M E++ 
Sbjct: 55  FQTAAKSGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNI 114

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           IS+N+LIS Y Q G  ++A+  F   +D   +K D+ T+   L  C     +D G ++  
Sbjct: 115 ISFNSLISGYTQVGFYEQAMELFLEARD-DNLKLDKFTYAGALGFCGERCDLDFG-KLLH 172

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
            +V   G       ++ ++D+  + G LD+A
Sbjct: 173 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 203


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/674 (30%), Positives = 350/674 (51%), Gaps = 43/674 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           N   G   HA  + +G      ++N +L++Y     L S ++VF      D+ +W   L 
Sbjct: 92  NLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILG 151

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           A                        Y A +     N  E  G+ LFR +          +
Sbjct: 152 A------------------------YAASVDSNDGNAQE--GLHLFRLLRASLGSTTRMT 185

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
            A VL +C ++G L     +H    K G    V V  AL+ +Y  CG + DA  +F+  +
Sbjct: 186 LAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMR 245

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-----R 305
               D + +N+M+ G   +G  +EA   F +   + LRP E +   +++ CL        
Sbjct: 246 ER--DVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLE 303

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G QVH  A+KSG ++  SV+N+ + MYS  G    A  +F  ++  D++SWN+MIS+ A
Sbjct: 304 LGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCA 363

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG--------FIEMVEMIHAFVFINGI 417
           Q +L   ++  ++++   G++PD FT  S+  ++          ++  + IHA     G 
Sbjct: 364 QSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGF 423

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +++ V++ ++  Y K   +  A  +F+ +S  + + W ++I+G + NG   Q L+ +  
Sbjct: 424 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 483

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +  S + PDEYT +  + + + +++L  G+Q+H  V+K + +S   +G +++ +YAKCG+
Sbjct: 484 MRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGN 543

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ + R+F  M  ++   WNA++   AQHG  +EAV+ FK+M+  G I+PD+ +F  +LS
Sbjct: 544 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG-IEPDRVSFIGILS 602

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSHAGL  +      SM NDYG  P  +H SC++D LGRAG + EA++VI +   +A +
Sbjct: 603 ACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASA 662

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
               AL  AC   G++  G+ +A  L   E    + YVLLSNIYAAA  W++  + R+++
Sbjct: 663 SINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMM 722

Query: 718 KRTGVIKQPGCSWI 731
           KR  V K PG SWI
Sbjct: 723 KRKNVKKDPGFSWI 736



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/481 (27%), Positives = 219/481 (45%), Gaps = 48/481 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S  G+ Q+ LHLF  + +S      + +L+  L  C N         +H YA++ GL+  
Sbjct: 159 SNDGNAQEGLHLFRLLRASLGSTTRM-TLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWD 217

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V+  ++++Y     +   + +F  ++  DV  W                         
Sbjct: 218 VFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW------------------------- 252

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGR 208
                 N M+ G  + G E     LF E H+  +R D +S   +L+ C       LE G+
Sbjct: 253 ------NMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGK 306

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H +  KSG    VSV N+L+ MY   G    A +VF + K    D IS+N M+   A 
Sbjct: 307 QVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHL--DLISWNSMISSCAQ 364

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVM-----SACLCPRV---GYQVHAQAMKSGFE 320
               EE++  F D+L   L+P   T  S+       AC C  +   G Q+HA A+K+GF+
Sbjct: 365 SSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 424

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V++  + MY  CG +  A ++F  +   D V+W +MIS          A+  Y  M
Sbjct: 425 SDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRM 484

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   + PDE+TF +L+ +S  +  +E    +HA V     +++  V  +L+  YAK   I
Sbjct: 485 RQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNI 544

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + AY++F  M+ RNI  WN ++ G   +G   + +  F  +    + PD  +    LS+C
Sbjct: 545 EDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 604

Query: 498 A 498
           +
Sbjct: 605 S 605



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 215/462 (46%), Gaps = 53/462 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAAC--ANLRNAAFGNQLHAY 82
           N+ L    + G  ++A  LF + H S  L+PD +S+   L  C  A   +   G Q+H  
Sbjct: 253 NMMLKGYVQLGLEKEAFQLFSEFHRS-GLRPDEFSVQLILNGCLWAGTDDLELGKQVHGI 311

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A+++GL +   VAN+++++Y         + VF+++++ D+ SW + +S+          
Sbjct: 312 AVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISS---------- 361

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
                                C ++  E+  + LF ++    ++ D+++ AS+     A 
Sbjct: 362 ---------------------CAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAK 400

Query: 203 ------LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
                 LL+ G+Q+H+   K+GF   + V + ++ MY  CG++V+A  VF        D 
Sbjct: 401 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISA--PDD 458

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +++  M+ G    G  ++AL  +  M  + + P E TF +++ A  C      G Q+HA 
Sbjct: 459 VAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHAN 518

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K    +   V  + + MY+ CG I++A  +F ++  ++I  WN M+   AQ      A
Sbjct: 519 VIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEA 578

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALIS 429
           +  +  M+S GI PD  +F  +L++   +G   E  E +H+     GI   I+  + L+ 
Sbjct: 579 VNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVD 638

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           A  +   +++A ++   M  +     +  IN  LL    +QG
Sbjct: 639 ALGRAGLVQEADKVIETMPFKA----SASINRALLGACRIQG 676



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 43/295 (14%)

Query: 15  NTSKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSL-STTLA----ACA 68
           N  K L L+  N  +++ ++S   +++++LF+ +     LKPD ++L S TLA    AC 
Sbjct: 345 NDMKHLDLISWNSMISSCAQSSLEEESVNLFIDL-LHEGLKPDHFTLASITLATAAKACG 403

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
            L     G Q+HA+A++AG  +  HV + IL +Y    D+V+   VF+ I  PD  +WT+
Sbjct: 404 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTS 463

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            +S C                                +NG ED  + ++  M +  V  D
Sbjct: 464 MISGC-------------------------------VDNGNEDQALRIYHRMRQSRVMPD 492

Query: 189 NYSFASVL--SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
            Y+FA+++  S C    LE GRQLH+ V K        V  +L+ MY  CGN+ DA ++F
Sbjct: 493 EYTFATLIKASSC-VTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 551

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  K  V +   +N M+ GLA  G  EEA+  F+ M    + P  ++F+ ++SAC
Sbjct: 552 K--KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSAC 604


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 236/730 (32%), Positives = 383/730 (52%), Gaps = 63/730 (8%)

Query: 25  NISLANLSRSG-HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR--NAAFGNQLHA 81
           N  LA+ SR+G H      L   + +S  + PD ++L     +C  LR   AA G Q+HA
Sbjct: 33  NALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHA 92

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A + GL   P V N+++S+Y                                + G V+ 
Sbjct: 93  LAAKLGLPGDPFVGNSLVSMY-------------------------------GRCGRVED 121

Query: 142 ACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFASVLSV 198
           A +VF  +PD  R++  +NA++   +  G    G+ LFR+ +  +    D  +  +VL +
Sbjct: 122 AEKVFGGIPDAARNIVSWNALMAALS--GDPRRGLELFRDCLVAVGGMVDEATLVTVLPM 179

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C A G  E GR +H L  KSG+     V NAL+ MY  CG + DA + F EA   V    
Sbjct: 180 CAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAPSVV---- 235

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSACLCP----RVGYQV 310
           S+NVM+           A    RDM +    S+   E+T +SV+ AC  P    R+  ++
Sbjct: 236 SWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRL-REL 294

Query: 311 HAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           HA  ++ G +A +  V NA +  Y  CG++  A  +F  ++ K + SWNT+IS +AQ+N 
Sbjct: 295 HAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTDIRRKTVSSWNTLISAHAQQNT 354

Query: 370 GRSAILAYLEM-QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
             +AI  +++M  + G++PD F+ GSLL   A    +  V+  H F+  NG+  +  +  
Sbjct: 355 A-AAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRA 413

Query: 426 ALISAYAKNERIKQ-AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           +L+SAY +  R +  A  +F  M  +  + W  +I+G+  NG P + LQ F E+   E  
Sbjct: 414 SLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGH 473

Query: 485 PDEY-TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
                + + AL +C+ +SS+R GK++H + LK +L     L +++I +Y+KCG ++ +  
Sbjct: 474 CSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDART 533

Query: 544 VFNMMIEKDT-ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            F+ +  +D  +SW A+I+ YA +G G+EAV  +  M+  G ++PD+ T+  +L AC HA
Sbjct: 534 FFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREG-MEPDEFTYLGLLMACGHA 592

Query: 603 GLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           G++++G R FD M N +  I  + +H SC++ +L RAG   +A  ++     +  +    
Sbjct: 593 GMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILS 652

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           ++ SAC  HG   LG  +A  LLE E DK   YVL SN+YA +  W++   +R++L+  G
Sbjct: 653 SVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAG 712

Query: 722 VIKQPGCSWI 731
           + K+PGCSWI
Sbjct: 713 IAKEPGCSWI 722


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 220/612 (35%), Positives = 331/612 (54%), Gaps = 16/612 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRR 187
           FL+   + G++  A  VF KM +R+L  +N ++ G  + GY D  I L+  M  +  V+ 
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194

Query: 188 DNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           D Y+F  VL  C  G+  L  GR++H  V + G+   + VVNALITMY  CG+V  A  +
Sbjct: 195 DVYTFPCVLRTC-GGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F+       D IS+N M+ G    G   E L  F  M   S+ P  +T  SV+SAC    
Sbjct: 254 FDRMPRR--DIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLG 311

Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G  +HA  + +GF    SV N+   MY   G   EA  +F+R+  KDIVSW TMIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMIS 371

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            Y    L   AI  Y  M    ++PDE T  ++L   A+ G ++    +H       +I+
Sbjct: 372 GYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            + V+N LI+ Y+K + I +A  IFHN+  +N+I+W ++I G  LN    + L  F ++ 
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMK 491

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           M+ L+P+  TL+ AL++CARI +L  GK+IH +VL+  +     L NA++ +Y +CG ++
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +   FN   +KD  SWN L++ Y++ G+G   V  F  M    R++PD+ TF ++L  C
Sbjct: 551 IAWNQFNSQ-KKDVSSWNILLTGYSERGQGSVVVELFDRMVK-ARVRPDEITFISLLCGC 608

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
             + +V  G   F  M  +YG  P   H +C++DLLGRAG L EA + I    +      
Sbjct: 609 GKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W AL +AC  H N+ LG + A  + E ++     Y+LL N+YA  G W E A +R ++K 
Sbjct: 668 WGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 720 TGVIKQPGCSWI 731
            G+    GCSW+
Sbjct: 728 NGLTVDAGCSWV 739



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 259/509 (50%), Gaps = 21/509 (4%)

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSC 221
           G   NG  +  + L   M +L V  D   F +++ +C+     E G +++S+   S  S 
Sbjct: 68  GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSL 127

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            V + NA + M+   GN+VDA  VF   K    +  S+NV++ G A  G  +EA+  +  
Sbjct: 128 SVELGNAFLAMFVRFGNLVDAWYVF--GKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185

Query: 282 ML-VASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
           ML V  ++P   TF  V+  C   P +  G +VH   ++ G+E    V NA ITMY  CG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
            +  A ++F R+  +DI+SWN MIS Y +  +G   +  +  M+ + + PD  T  S+++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305

Query: 398 SSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           +   +    +   IHA+V   G   +I V N+L   Y      ++A ++F  M  ++I++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVS 365

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W T+I+G+  N  P + +  +  +    ++PDE T++  LS+CA +  L  G ++H   +
Sbjct: 366 WTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           K  LIS + + N +I +Y+KC  +D +L +F+ +  K+ ISW ++I+    +    EA+ 
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI----FDSMVNDYGFIPAEDHLSC 630
            F+ M+    ++P+  T TA L+AC+  G +  G  I      + V    F+P     + 
Sbjct: 486 FFRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-----NA 538

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDN 659
           +LD+  R G ++ A    NSQ     S N
Sbjct: 539 LLDMYVRCGRMNIAWNQFNSQKKDVSSWN 567



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 145/558 (25%), Positives = 262/558 (46%), Gaps = 43/558 (7%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  L   N+ +   ++ G++ +A+ L+ ++     +KPD+Y+    L  C  + + A G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++H + +R G +    V N ++++Y    D+ S + +F  +   D+ SW          
Sbjct: 216 REVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW---------- 265

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                NAMI+G  ENG    G+ LF  M  L V  D  +  SV+
Sbjct: 266 ---------------------NAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C+  G    GR +H+ V  +GF+  +SV N+L  MY   G+  +A K+F        D
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMD--CKD 362

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            +S+  M+ G       E+A+  +R M   S++P E+T  +V+SAC        G ++H 
Sbjct: 363 IVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K+   +Y  V+N  I MYS C  ID+A  IF  +  K+++SW ++I+     N    
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A++ + +M+ + ++P+  T  + LA+    G +   + IHA V   G+  +  + NAL+ 
Sbjct: 483 ALIFFRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y +  R+  A+  F N   +++ +WN L+ G+   G     ++ F  ++ + +RPDE T
Sbjct: 542 MYVRCGRMNIAWNQF-NSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEIT 600

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
               L  C +   +R G      + +  +   +     ++ L  + G+L  + +    M 
Sbjct: 601 FISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660

Query: 549 IEKDTISWNALISAYAQH 566
           +  D   W AL++A   H
Sbjct: 661 VTPDPAVWGALLNACRIH 678


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 217/734 (29%), Positives = 360/734 (49%), Gaps = 62/734 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G    ++ +FV +  +   + D  + +  L  C+ L + + G Q+H   +
Sbjct: 107 NSMLSGYLQNGETLKSIEVFVDMGRAGT-EFDGRTFAIILKVCSCLEDTSLGMQIHGVVV 165

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G       A+ +L +Y   +  V   RVF  I   +  SW+                 
Sbjct: 166 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS----------------- 208

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                         A+I GC +N    + +  F+EM K++       +ASVL  C A   
Sbjct: 209 --------------AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 254

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+   KS F+    V  A + MY  C N+ DA  +F++++    +  SYN M+
Sbjct: 255 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENL--NRQSYNAMI 312

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G +      +AL+ F  ++ + L   E++   V  AC   +    G Q++  A+KS   
Sbjct: 313 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLS 372

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NAAI MY  C  + EA  +F  ++ +D VSWN +I+ + Q   G   +  ++ M
Sbjct: 373 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 432

Query: 381 QSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               I PDEFTFGS+L   + G +     IH+ +  +G+ +N  V  +LI  Y+K   I+
Sbjct: 433 LRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 492

Query: 439 QAYQI-------------------FHNMSPRNI-ITWNTLINGFLLNGFPVQGLQHFSEL 478
           +A +I                    HN   + + ++WN++I+G+++          F+ +
Sbjct: 493 EAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           +   + PD++T +  L +CA ++S   GKQIH  V+K  L S + + + ++ +Y+KCGDL
Sbjct: 553 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDL 612

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             S  +F   + +D ++WNA+I  YA HG+G+EA+  F+ M  +  IKP+  TF ++L A
Sbjct: 613 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRA 671

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GL+D G   F  M  DYG  P   H S M+D+LG++G +  A  +I     +A   
Sbjct: 672 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 731

Query: 659 NWWALFSACAAH-GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
            W  L   C  H  N+ +       LL  +    S Y LLSN+YA AG+WE+ +++R  +
Sbjct: 732 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 791

Query: 718 KRTGVIKQPGCSWI 731
           +   + K+PGCSW+
Sbjct: 792 RGFKLKKEPGCSWV 805



 Score =  248 bits (634), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 183/688 (26%), Positives = 332/688 (48%), Gaps = 48/688 (6%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           CA       G Q HA+ + +G +    V N +L +Y N+RD VS   VF  +   DV SW
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
              ++   K  ++  A   F+ MP RD+  +N+M++G  +NG     I +F +M +    
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 187 RDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            D  +FA +L VC    LE    G Q+H +V + G    V   +AL+ MY      V++ 
Sbjct: 136 FDGRTFAIILKVCSC--LEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESL 193

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
           +VF+       + +S++ ++ G      +  AL  F++M   +   S+  + SV+ +C  
Sbjct: 194 RVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 251

Query: 304 ---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               R+G Q+HA A+KS F A   V  A + MY+ C  + +A ++F + +  +  S+N M
Sbjct: 252 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAM 311

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGI 417
           I+ Y+Q   G  A+L +  + S G+  DE +   +  +   ++ +     I+     + +
Sbjct: 312 ITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSL 371

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             ++ V+NA I  Y K + + +A+++F  M  R+ ++WN +I     NG   + L  F  
Sbjct: 372 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 431

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L S + PDE+T    L +C    SL +G +IH  ++K+ + S  S+G ++I +Y+KCG 
Sbjct: 432 MLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 490

Query: 538 LDCSLRV--------------------FNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           ++ + ++                     N  +++  +SWN++IS Y    + ++A   F 
Sbjct: 491 IEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 550

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLG 636
            M ++G I PD+ T+  VL  C++      G +I   ++     + ++ ++S  L D+  
Sbjct: 551 RMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYS 607

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER---EQDKPSV 693
           + G L ++ R++  + ++     W A+    A HG        A  L ER   E  KP+ 
Sbjct: 608 KCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEE----AIQLFERMILENIKPNH 662

Query: 694 YVLLSNIYAAA--GLWEEAANIRELLKR 719
              +S + A A  GL ++      ++KR
Sbjct: 663 VTFISILRACAHMGLIDKGLEYFYMMKR 690



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           +E+ +  N  ++        +DA  LF ++     + PD ++ +T L  CANL +A  G 
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMME-MGITPDKFTYATVLDTCANLASAGLGK 581

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+HA  ++  L++  ++++T++ +Y    DL   + +F +    D  +W   +      G
Sbjct: 582 QIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 641

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNY 190
             + A ++F++M   ++      + +++  C   G  D G+  F  M +   LD +  +Y
Sbjct: 642 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 701

Query: 191 S 191
           S
Sbjct: 702 S 702


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 239/785 (30%), Positives = 390/785 (49%), Gaps = 118/785 (15%)

Query: 28  LANLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L + GH Q+++HL  ++     ++ P+IY     L  C   R    G Q+HA  L+ 
Sbjct: 51  ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYG--ELLQGCVYERALHTGQQIHARILKN 108

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVK-RVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D   V  R+F  ++  +V+SW   +    +MG       
Sbjct: 109 GDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFS----- 163

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                    ED  +G F EM +  V  DN+   +VL  C +  L
Sbjct: 164 -------------------------EDALLG-FIEMQENGVFPDNFVLPNVLKACGSLQL 197

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G+ +H  V K GF   V V ++L+ MY  CG + DA KVF+       + +++N M+
Sbjct: 198 IGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMI 255

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G    G  +EA+  F DM V  + P+ +T  S +SA         G Q HA A+ +  +
Sbjct: 256 VGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLD 315

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLE 379
               + ++ I  YS  G I++A ++F+R+ EKD+V+WN +IS+Y Q + +G++  + +L 
Sbjct: 316 LDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHL- 374

Query: 380 MQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+S  +R D  T  S+L++S     I++ +  H +     + +++ V+N++I  YAK ER
Sbjct: 375 MRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCER 434

Query: 437 IK-------------------------------QAYQIFHNMS----PRNIITWNTLING 461
           I                                +A ++F+ M     P N+I+WN++I G
Sbjct: 435 IDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILG 494

Query: 462 FLLNG-----------------------------------FPVQGLQHFSELLMSELRPD 486
           FL NG                                   F  + +  F ++  + +RP 
Sbjct: 495 FLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPS 554

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             +++  L +C  I SL +G+ IHG++ ++     + +  +++ +YAKCG +D + +VF+
Sbjct: 555 IASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFH 614

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           MM  K+   +NA+ISAYA HG+  EA++ FK +Q  G I+PD  TFT++LSACSHAGLV+
Sbjct: 615 MMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG-IEPDSITFTSILSACSHAGLVN 673

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G  +F  MV+ +   P  +H  C++ LL R G LDEA R+I +   Q  +    +L +A
Sbjct: 674 EGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTA 733

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H  + LG  ++  L + E      YV LSN YAAAG W E +N+R+L+K  G+ K P
Sbjct: 734 CREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNP 793

Query: 727 GCSWI 731
           GCSWI
Sbjct: 794 GCSWI 798



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 185/349 (53%), Gaps = 9/349 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQA 314
           SY   +  L   G ++E++    +M     +     +  ++  C+  R    G Q+HA+ 
Sbjct: 46  SYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARI 105

Query: 315 MKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           +K+G  F     V    +  Y+ C   + A  +F RL+ +++ SW  ++    +      
Sbjct: 106 LKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSED 165

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A+L ++EMQ  G+ PD F   ++L + G ++++ +   +H +V   G    + VS++L+ 
Sbjct: 166 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVD 225

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   ++ A ++F +M  +N++TWN++I G++ NG   + +  F ++ +  + P   T
Sbjct: 226 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 285

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  LS+ A + +L  GKQ H   + N+L     LG+++I  Y+K G ++ +  VF+ M+
Sbjct: 286 VASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 345

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           EKD ++WN LIS+Y QH +  +A++    M+    ++ D  T +++LSA
Sbjct: 346 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRS-ENLRFDSVTLSSILSA 393


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 216/710 (30%), Positives = 365/710 (51%), Gaps = 50/710 (7%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  Q ++ +F+++     +  D  +L+ +L  C+ L +   G Q+H  A++ G     
Sbjct: 134 QNGDIQKSIAVFLKMRDL-GVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGF---- 188

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                                      + DV + +  +    K   ++ + +VF ++PD+
Sbjct: 189 ---------------------------DYDVVTGSALVDMYAKCNSLEDSLDVFSELPDK 221

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL--EFGRQL 210
           +   ++A I GC +N     G+ LF+EM +  +     ++ASV   C AGL     G QL
Sbjct: 222 NWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC-AGLSASRLGTQL 280

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLAS 268
           H    K+ F   V V  A + MY  C N+ DA K+F      + DH   SYN M+ G A 
Sbjct: 281 HCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLF----SLLPDHNLQSYNAMIIGYAR 336

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
             +  +A   F  +   S    E++    +SA    +    G Q+H  A+KS   +   V
Sbjct: 337 NEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICV 396

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +NA + MY  CG + EA  +F  ++ +D VSWN +I+   Q       +  +  M    +
Sbjct: 397 ANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKM 456

Query: 386 RPDEFTFGSLLAS----SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
            PDEFT+GS+L +      F   +E +H  +  +G+   + V +AL+  Y+K   +++A 
Sbjct: 457 EPDEFTYGSVLKACAGQRAFSNGME-VHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAE 515

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           +I + +  + +++WN +I+GF L        + FS +L   + PD +T +  L +CA ++
Sbjct: 516 KIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLA 575

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++  GKQIH  ++K  L+S + + + ++ +Y+KCG++  SL +F    ++D+++WNA+I 
Sbjct: 576 TVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMIC 635

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            +A HG G+EA+  F+ M     IKP+ ATF +VL ACSH G    G   F  M + Y  
Sbjct: 636 GFAYHGLGEEALELFEHMLH-ENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYAL 694

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H SCM+D+LGR+G ++EA R+I     +A +  W  L S C   GN+ +    A 
Sbjct: 695 EPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAAS 754

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LL+ + +  S Y LLSNIYA AG+W++ + IR+ ++   + K+PGCSWI
Sbjct: 755 SLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWI 804



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 288/569 (50%), Gaps = 15/569 (2%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + S     C+N R    G + HA+ + +G      V N ++ +Y     L    +VF E+
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLF 177
              D+ SW T +  C   G ++ A  VF+ MP   D+  +N++I+G  +NG     I +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            +M  L V  D+ + A  L +C   LLE    G Q+H +  + GF   V   +AL+ MY 
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKIC--SLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            C ++ D+  VF E      + IS++  + G     ++   L  F++M    +  S+ T+
Sbjct: 204 KCNSLEDSLDVFSELPDK--NWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTY 261

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            SV  +C      R+G Q+H  A+K+ F +   V  A + MY+ C  + +A  +F+ L +
Sbjct: 262 ASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPD 321

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MI 408
            ++ S+N MI  YA+   G  A   +L++Q      DE +    L+++  I+       +
Sbjct: 322 HNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQL 381

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H     + + +NI V+NA++  Y K   + +A  +F  M  R+ ++WN +I     N   
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESE 441

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + L HF  +L S++ PDE+T    L +CA   +  +G ++HG ++K+ +  KM +G+A+
Sbjct: 442 GKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSAL 501

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +Y+KCG ++ + ++   + E+  +SWNA+IS ++   + +++   F  M ++G ++PD
Sbjct: 502 VDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMG-VEPD 560

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVN 617
             T+  VL  C++   V  G +I   M+ 
Sbjct: 561 NFTYATVLDTCANLATVGLGKQIHAQMIK 589



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 238/500 (47%), Gaps = 51/500 (10%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F+ +   C +   L+ G++ H+ +  SGF+  V V N LI MY  C  +  A KVFEE 
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEA---------------------------------- 275
                D +S+N M+ G A  GR+E A                                  
Sbjct: 86  PQR--DIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 276 -LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
             ++ RD+ V     +    + + S      +G Q+H  A++ GF+      +A + MY+
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C  ++++  +F+ L +K+ +SW+  I+   Q +     +  + EMQ  GI   + T+ S
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 395 LLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +  S   +    +   +H         +++ V  A +  YAK + +  AY++F  +   N
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           + ++N +I G+  N    Q  + F +L  +    DE +LS ALS+ A I     G Q+HG
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
             +K+NL S + + NA++ +Y KCG L  +  +F+ M  +D +SWNA+I+A  Q+    +
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT----RIFDSMVNDYGFIPAEDH 627
            +S F AM    +++PD+ T+ +VL AC+      +G     RI  S +    F+     
Sbjct: 444 TLSHFGAMLR-SKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVG---- 498

Query: 628 LSCMLDLLGRAGYLDEAERV 647
            S ++D+  + G ++EAE++
Sbjct: 499 -SALVDMYSKCGMMEEAEKI 517



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 204/453 (45%), Gaps = 51/453 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   +R+     A  LF+Q+  +     D  SLS  L+A A ++  + G QLH
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKN-SFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A+++ L +   VAN IL +Y     LV    +F E++  D  SW              
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSW-------------- 428

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NA+IT C +N  E   +  F  M +  +  D +++ SVL  C 
Sbjct: 429 -----------------NAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKAC- 470

Query: 201 AGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV---FEEAKGYVCD 255
           AG   F  G ++H  + KSG    + V +AL+ MY  CG + +A K+    EE       
Sbjct: 471 AGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT----- 525

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            +S+N ++ G +   + E++   F  ML   + P   T+ +V+  C       +G Q+HA
Sbjct: 526 MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHA 585

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           Q +K    +   +++  + MYS CG + ++ ++F +  ++D V+WN MI  +A   LG  
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALI 428
           A+  +  M    I+P+  TF S+L +   +   +           I  +   ++  + ++
Sbjct: 646 ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMV 705

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
               ++ ++++A ++  +M    + I W TL++
Sbjct: 706 DILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 207/458 (45%), Gaps = 56/458 (12%)

Query: 293 TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF  +   C   R    G + HA  + SGF     V+N  I MY  C  ++ A  +F  +
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 350 QEKDIVSWNTM--------------------------------ISTYAQRNLGRSAILAY 377
            ++DIVSWNTM                                IS Y Q    + +I  +
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           L+M+ +G+  D  T    L     +E   +   IH      G   ++   +AL+  YAK 
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             ++ +  +F  +  +N I+W+  I G + N   ++GL+ F E+    +   + T +   
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            SCA +S+ R G Q+H + LK +  S + +G A + +YAKC ++  + ++F+++ + +  
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS-----HAGLVDDGT 609
           S+NA+I  YA++ +G +A   F  +Q       D+ + +  LSA +       GL   G 
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQK-NSFSFDEVSLSGALSAAAVIKGHSEGLQLHGL 384

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            I  ++ ++     A      +LD+ G+ G L EA  + +   I+    +W A+ +AC  
Sbjct: 385 AIKSNLSSNICVANA------ILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACEQ 437

Query: 670 HGNLRLGRIIA--GLLLEREQDKPSVYVLLSNIYAAAG 705
             N   G+ ++  G +L R + +P  +   S + A AG
Sbjct: 438 --NESEGKTLSHFGAML-RSKMEPDEFTYGSVLKACAG 472



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 114/271 (42%), Gaps = 57/271 (21%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLK----PDIYSLSTTLAACANLRNA 73
           ++ ++  N  ++  S     +D+   F     SH L+    PD ++ +T L  CANL   
Sbjct: 523 EQTMVSWNAIISGFSLQKKSEDSQRFF-----SHMLEMGVEPDNFTYATVLDTCANLATV 577

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+HA  ++  L +  ++ +T++ +Y                               
Sbjct: 578 GLGKQIHAQMIKLELLSDVYITSTLVDMY------------------------------- 606

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           +K G++  +  +F K P RD   +NAMI G   +G  +  + LF  M   +++ ++ +F 
Sbjct: 607 SKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFV 666

Query: 194 SVLSVC------DAGLLEFGR--QLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACK 244
           SVL  C        GL  F +   +++L  +   +SC+V ++          G V +A +
Sbjct: 667 SVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILG-------RSGQVEEALR 719

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           + ++   +  D I +  ++      G VE A
Sbjct: 720 LIQDMP-FEADAIIWRTLLSICKIQGNVEVA 749


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 222/707 (31%), Positives = 361/707 (51%), Gaps = 42/707 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G+  +AL LF +   S   KP+ Y L++ + AC  L N +   QLH + ++ G    
Sbjct: 129 TQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGF--- 185

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                                     +Q  DVY  T+ +    K G+VD A  +FD +  
Sbjct: 186 --------------------------VQ--DVYVGTSLIDFYAKRGYVDEARLIFDGLKV 217

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           +    + A+I G  + G  ++ + LF +M + DV  D Y  +SVLS C     LE G+Q+
Sbjct: 218 KTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQI 277

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V + GF   VSVVN +I  Y  C  V    K+F        D +S+  M+ G     
Sbjct: 278 HGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK--DVVSWTTMIAGCMQNS 335

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              +A+  F +M+    +P      SV+++C      + G QVHA A+K   +    V N
Sbjct: 336 FHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKN 395

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             I MY+ C  +  A  +F  +   ++VS+N MI  Y++++    A+  + EM+     P
Sbjct: 396 GLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPP 455

Query: 388 DEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
              TF     L +S   +E+   IH  +   G+  +    +ALI  Y+K   +  A  +F
Sbjct: 456 TLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVF 515

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  R+I+ WN + +G+       + L+ + +L MS L+P+E+T +  +++ + I+SLR
Sbjct: 516 EEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLR 575

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           HG+Q H  V+K  L     + N+++ +YAKCG ++ S + F+   ++D   WN++IS YA
Sbjct: 576 HGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYA 635

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHG+  +A+  F+ M   G +KP+  TF  +LSACSHAGL+D G   F+SM + +G  P 
Sbjct: 636 QHGDAAKALEVFERMIMEG-VKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPG 693

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            DH +CM+ LLGRAG + EA+  +    I+  +  W +L SAC   G++ LG   A + +
Sbjct: 694 IDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAI 753

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +      Y+LLSNI+A+ G+W     +RE +  + V+K+PG SWI
Sbjct: 754 SCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWI 800



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 176/619 (28%), Positives = 307/619 (49%), Gaps = 24/619 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF-REM 180
           DV+   T L A +KM     A ++FD MP R+L  +++M++  T++GY    + LF R M
Sbjct: 86  DVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFM 145

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                + + Y  ASV+  C   G L    QLH  V K GF   V V  +LI  Y   G V
Sbjct: 146 RSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYV 205

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A  +F+  K  V   +++  ++ G A +GR E +L  F  M    + P      SV+S
Sbjct: 206 DEARLIFDGLK--VKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLS 263

Query: 300 ACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G Q+H   ++ GF+   SV N  I  Y  C K+     +F RL +KD+VS
Sbjct: 264 ACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVS 323

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF 413
           W TMI+   Q +    A+  ++EM   G +PD F   S+L S G ++ ++    +HA+  
Sbjct: 324 WTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAI 383

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              I  +  V N LI  YAK + +  A ++F  ++  N++++N +I G+      V+ L 
Sbjct: 384 KVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALD 443

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F E+ +S   P   T    L   + +  L    QIH  ++K  +      G+A+I +Y+
Sbjct: 444 LFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYS 503

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  +  +  VF  + ++D + WNA+ S Y+Q  E +E++  +K +Q + R+KP++ TF 
Sbjct: 504 KCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQ-MSRLKPNEFTFA 562

Query: 594 AVLSACSHAGLVDDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           AV++A S+   +  G +  + ++    +D  F+      + ++D+  + G ++E+ +  +
Sbjct: 563 AVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVT-----NSLVDMYAKCGSIEESHKAFS 617

Query: 650 SQHIQARSDNWWALFSACAAHGN-LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
           S + Q     W ++ S  A HG+  +   +   +++E  +     +V L +  + AGL +
Sbjct: 618 STN-QRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLD 676

Query: 709 EAANIRELLKRTGVIKQPG 727
              +  E + + G+  +PG
Sbjct: 677 LGFHHFESMSKFGI--EPG 693



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/543 (27%), Positives = 264/543 (48%), Gaps = 42/543 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  ++ G  + +L LF Q+     + PD Y +S+ L+AC+ L     G Q+H Y LR G
Sbjct: 227 IAGYAKLGRSEVSLKLFNQMREG-DVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRG 285

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V N I+  Y     + + +++F+ + + DV SWTT                   
Sbjct: 286 FDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTT------------------- 326

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                       MI GC +N +    + LF EM +   + D +   SVL+ C +   L+ 
Sbjct: 327 ------------MIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQK 374

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GRQ+H+   K        V N LI MY  C ++ +A KVF+       + +SYN M++G 
Sbjct: 375 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAA--INVVSYNAMIEGY 432

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSGFEAYT 323
           +   ++ EAL  FR+M ++   P+ LTFV    + S+     +  Q+H   +K G    +
Sbjct: 433 SRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDS 492

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
              +A I +YS C  + +A ++F  + ++DIV WN M S Y+Q+     ++  Y ++Q  
Sbjct: 493 FAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMS 552

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++P+EFTF +++A++  I  +   +  H  V   G+  +  V+N+L+  YAK   I+++
Sbjct: 553 RLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEES 612

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++ F + + R+I  WN++I+ +  +G   + L+ F  ++M  ++P+  T    LS+C+  
Sbjct: 613 HKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHA 672

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNAL 559
             L  G      + K  +   +     M++L  + G + +    V  M I+   + W +L
Sbjct: 673 GLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSL 732

Query: 560 ISA 562
           +SA
Sbjct: 733 LSA 735



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 120/206 (58%), Gaps = 3/206 (1%)

Query: 408 IHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           IHA + + G    ++ + N L+ AY+K      A ++F  M  RN++TW+++++ +  +G
Sbjct: 73  IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132

Query: 467 FPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           + V+ L  F   + S   +P+EY L+  + +C ++ +L    Q+HG+V+K   +  + +G
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            ++I  YAK G +D +  +F+ +  K T++W A+I+ YA+ G  + ++  F  M++ G +
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMRE-GDV 251

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRI 611
            PD+   ++VLSACS    ++ G +I
Sbjct: 252 YPDRYVISSVLSACSMLEFLEGGKQI 277



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 115/261 (44%), Gaps = 22/261 (8%)

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL-----------RHGKQIHG 511
            LN   V    HFS LL   L+P +  + +       +  L            + K+IH 
Sbjct: 16  FLNKDNVSQTLHFSTLLPPFLQPHDSPILIQRKIGRELGKLLQLPSPNILTSHYYKKIHA 75

Query: 512 YVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
           +++        + L N ++  Y+K      + ++F+ M  ++ ++W++++S Y QHG   
Sbjct: 76  HIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSV 135

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           EA+  F         KP++    +V+ AC+  G +    ++   +V   GF+      + 
Sbjct: 136 EALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKG-GFVQDVYVGTS 194

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           ++D   + GY+DEA  + +   ++  +  W A+ +     G  +LGR    L L  +  +
Sbjct: 195 LIDFYAKRGYVDEARLIFDGLKVKT-TVTWTAIIA-----GYAKLGRSEVSLKLFNQMRE 248

Query: 691 PSVY---VLLSNIYAAAGLWE 708
             VY    ++S++ +A  + E
Sbjct: 249 GDVYPDRYVISSVLSACSMLE 269


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 224/764 (29%), Positives = 385/764 (50%), Gaps = 64/764 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF---GNQLHA 81
           N  ++ + R G Y + +  F ++     +KP  + +++ + AC   R+ +    G Q+H 
Sbjct: 142 NTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHG 198

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKR-VFSEIQNPDVYSWTTFL---------- 130
           +  ++GL +  +V+  IL LY     LVS  R VF E+ + +V SWT+ +          
Sbjct: 199 FVAKSGLLSDVYVSTAILHLY-GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 257

Query: 131 -----------------------------------SACTKMGHVDYACEVFDKMPDRDLP 155
                                              S    MG+VDYA  +FD+M +RD  
Sbjct: 258 EVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 317

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLV 214
            +N++     +NG+ +    +F  M +     ++ + +++LSV       ++GR +H LV
Sbjct: 318 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 377

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            K GF  +V V N L+ MY   G  V+A  VF++      D IS+N +M    + GR  +
Sbjct: 378 VKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP--TKDLISWNSLMASFVNDGRSLD 435

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           AL     M+ +    + +TF S ++AC  P     G  +H   + SG      + NA ++
Sbjct: 436 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 495

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY   G++ E+  +  ++  +D+V+WN +I  YA+      A+ A+  M+  G+  +  T
Sbjct: 496 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 555

Query: 392 FGSLLAS----SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
             S+L++       +E  + +HA++   G  ++  V N+LI+ YAK   +  +  +F+ +
Sbjct: 556 VVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 615

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             RNIITWN ++     +G   + L+  S++    +  D+++ S  LS+ A+++ L  G+
Sbjct: 616 DNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQ 675

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+HG  +K        + NA   +Y+KCG++   +++    + +   SWN LISA  +HG
Sbjct: 676 QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 735

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
             +E  + F  M ++G IKP   TF ++L+ACSH GLVD G   +D +  D+G  PA +H
Sbjct: 736 YFEEVCATFHEMLEMG-IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEH 794

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
             C++DLLGR+G L EAE  I+   ++     W +L ++C  HGNL  GR  A  L + E
Sbjct: 795 CICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLE 854

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +  SVYVL SN++A  G WE+  N+R+ +    + K+  CSW+
Sbjct: 855 PEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 898



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 266/551 (48%), Gaps = 33/551 (5%)

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
           T ++  TK G V  A  +FD MP R+   +N M++G    G    G+  FR+M  L ++ 
Sbjct: 112 TLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKP 171

Query: 188 DNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            ++  AS+++ C     +   G Q+H  V KSG    V V  A++ +Y   G V  + KV
Sbjct: 172 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 231

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           FEE      + +S+  +M G +  G  EE +  ++D                        
Sbjct: 232 FEEMPDR--NVVSWTSLMVGYSDKGEPEEVIDIYKD----------------------ES 267

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+  Q +KSG E+  +V N+ I+M  S G +D A  IF ++ E+D +SWN++ + YA
Sbjct: 268 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 327

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
           Q      +   +  M+      +  T  +LL+  G ++  +    IH  V   G  + + 
Sbjct: 328 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 387

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V N L+  YA   R  +A  +F  M  +++I+WN+L+  F+ +G  +  L     ++ S 
Sbjct: 388 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSG 447

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
              +  T + AL++C        G+ +HG V+ + L     +GNA++++Y K G++  S 
Sbjct: 448 KSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESR 507

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           RV   M  +D ++WNALI  YA+  +  +A++ F+ M+  G +  +  T  +VLSAC   
Sbjct: 508 RVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLP 566

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWW 661
           G + +  +   + +   GF   E   + ++ +  + G L  ++ + N   +  R+   W 
Sbjct: 567 GDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWN 624

Query: 662 ALFSACAAHGN 672
           A+ +A A HG+
Sbjct: 625 AMLAANAHHGH 635



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 202/446 (45%), Gaps = 30/446 (6%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR +H+L  K      V   N LI MY   G V  A  +F+     V + +S+N MM G+
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMP--VRNEVSWNTMMSGI 148

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAY 322
             VG   E +  FR M    ++PS     S+++AC       R G QVH    KSG  + 
Sbjct: 149 VRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 208

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             VS A + +Y   G +  +  +F  + ++++VSW +++  Y+ +      I  Y + +S
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD-ES 267

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +G                       I   V  +G+ + + V N+LIS       +  A  
Sbjct: 268 LG---------------------RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANY 306

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  MS R+ I+WN++   +  NG   +  + FS +       +  T+S  LS    +  
Sbjct: 307 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 366

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            + G+ IHG V+K    S + + N ++ +YA  G    +  VF  M  KD ISWN+L+++
Sbjct: 367 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 426

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +   G   +A+    +M   G+   +  TFT+ L+AC      + G RI   +V   G  
Sbjct: 427 FVNDGRSLDALGLLCSMISSGK-SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLF 484

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVI 648
             +   + ++ + G+ G + E+ RV+
Sbjct: 485 YNQIIGNALVSMYGKIGEMSESRRVL 510



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  LA  +  GH ++ L L  ++ S   +  D +S S  L+A A L     G QLH
Sbjct: 620 IITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 678

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ G +    + N    +Y    ++  V ++     N  + SW   +SA  + G+ +
Sbjct: 679 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 738

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLF 177
             C  F +M +  +      + +++T C+  G  D G+  +
Sbjct: 739 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 779


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 213/648 (32%), Positives = 345/648 (53%), Gaps = 17/648 (2%)

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSW---TTFLSACTKMGHVDYACEVFDKMPDRD 153
           ++L  Y  A+ L S K++ + +    + S    +  ++     G+V  A ++FD++  R 
Sbjct: 26  SLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRG 85

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSVCDAGLL-EFGRQLH 211
             +YN MI      G     + +F EM    D   DNY++  V+  C   LL E+GR LH
Sbjct: 86  TLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLH 145

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L   S F   + V+N+L+ MY NCG V +A KVF+  K      +S+N M++G    G 
Sbjct: 146 GLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSV--VSWNTMINGYFKNGF 203

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
              AL+ F  M+ + +     + VSV+ AC   +   VG +VH   ++        VSNA
Sbjct: 204 ANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHG-LVEEKVLGKKIVSNA 262

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG +DEA ++F  + E+D+VSW +MI+ Y      +SA+  +  MQ  G+RP+
Sbjct: 263 LVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPN 322

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T   +L   AS   ++    +H +V    + + + V  +LI  YAK   +  ++ +F 
Sbjct: 323 SVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFT 382

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
             S +  + WN L++G + N    + +  F ++LM  +  +  T +  L +   ++ L+ 
Sbjct: 383 RTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQP 442

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAY 563
              I+ Y++++  +S + +  ++I +Y+KCG L+ + ++FN +    +D   W+ +I+ Y
Sbjct: 443 VNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGY 502

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             HG G+ AVS FK M   G +KP+  TFT+VL +CSHAG+VDDG  +F  M+ D+  IP
Sbjct: 503 GMHGHGETAVSLFKQMVQSG-VKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIP 561

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
            +DH +CM+DLLGRAG +DEA  +I +         W AL  AC  H N+ LG + A  L
Sbjct: 562 NDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWL 621

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E E      YVLL+ +YAA G WE+A N+R+ +   G+ K P  S I
Sbjct: 622 FELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLI 669



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/543 (25%), Positives = 251/543 (46%), Gaps = 45/543 (8%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y +A+ +F+++  S    PD Y+    + AC+ L    +G  LH   L +   ++  V
Sbjct: 100 GDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFV 159

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N++L++Y N  ++   ++VF  ++   V SW T ++   K G  + A  VF++M D  +
Sbjct: 160 LNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGV 219

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSL 213
            +                               D  S  SVL  C     LE GR++H L
Sbjct: 220 EI-------------------------------DGASVVSVLPACGYLKELEVGRRVHGL 248

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V +      + V NAL+ MY  CG++ +A  VF+       D +S+  M++G    G  +
Sbjct: 249 VEEKVLGKKI-VSNALVDMYAKCGSMDEARLVFDNMVER--DVVSWTSMINGYILNGDAK 305

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            AL  F+ M +  LRP+ +T   ++ AC      + G  +H   MK    +  +V  + I
Sbjct: 306 SALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLI 365

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ C  +  +  +F R   K  V WN ++S      L   AI  + +M   G+  +  
Sbjct: 366 DMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAA 425

Query: 391 TFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  SLL + G    ++ V  I++++  +G ++NIQV+ +LI  Y+K   ++ A++IF+ +
Sbjct: 426 TCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTI 485

Query: 448 --SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               ++I  W+ +I G+ ++G     +  F +++ S ++P++ T +  L SC+    +  
Sbjct: 486 PVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDD 545

Query: 506 GKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAY 563
           G  +  ++LK++  I        M+ L  + G +D +  +   M        W AL+ A 
Sbjct: 546 GLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGAC 605

Query: 564 AQH 566
             H
Sbjct: 606 VMH 608


>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 852

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/643 (31%), Positives = 336/643 (52%), Gaps = 43/643 (6%)

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +N +L+    +  +   + +F ++   D Y+W T +S    +G +  A E+F+    R  
Sbjct: 118 SNQLLNGLSKSGQIDDARELFDKMLQRDEYTWNTMVSGYANVGRLVEARELFNGFSSRSS 177

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
             ++++I+G    G +     LF+ M     +   Y+  S+L  C A GL++ G  +H  
Sbjct: 178 ITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPSQYTLGSILRGCSALGLIQKGEMIHGY 237

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K+GF   V VV  L+ MY  C ++ +A  +F+       +H+ +  M+ G A  G   
Sbjct: 238 VVKNGFESNVYVVAGLVDMYAKCRHISEAEILFKGLAFNKGNHVLWTAMVTGYAQNGDDH 297

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           +A+  FR M    +  ++ TF S+++AC        G QVH   +++GF     V +A +
Sbjct: 298 KAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCNAYVQSALV 357

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG +  A  +   +++ D+VSWN+MI    +      AIL + +M +  ++ D +
Sbjct: 358 DMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHY 417

Query: 391 TFGSLLASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           TF S+L     G I+  + +H  V   G      VSNAL+  YAK E +  AY +F  M 
Sbjct: 418 TFPSVLNCCIVGRIDG-KSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMF 476

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            +++I+W +L+ G+  NG   + L+ F ++ +S + PD++ ++  LS+CA ++ L  GKQ
Sbjct: 477 EKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQ 536

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H   +K  L S +S+ N+++T+YAKCG LD +  +F  M  +D I+W ALI  YA++G+
Sbjct: 537 VHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGK 596

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G++++  F+ M+ +  I+P                                      +H 
Sbjct: 597 GRDSLKYFQQMKKIYGIEP------------------------------------GPEHY 620

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +CM+DL GR G LDEA+ ++N   ++  +  W AL +AC  HGNL LG   A  L E E 
Sbjct: 621 ACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNLFELEP 680

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                YV+LSN+Y AA  W++AA IR L+K  G+ K+PGCSWI
Sbjct: 681 MNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKGITKEPGCSWI 723



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 260/546 (47%), Gaps = 72/546 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   R G   +A  LF ++    + KP  Y+L + L  C+ L     G  +H Y ++ G
Sbjct: 184 ISGYCRFGRQAEAFDLFKRMRLEGQ-KPSQYTLGSILRGCSALGLIQKGEMIHGYVVKNG 242

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++  +V   ++ +Y   R +   + +F  +             A  K  HV        
Sbjct: 243 FESNVYVVAGLVDMYAKCRHISEAEILFKGL-------------AFNKGNHV-------- 281

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-F 206
                   ++ AM+TG  +NG +   I  FR MH   V  + ++F S+L+ C +     F
Sbjct: 282 --------LWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCF 333

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H  + ++GF C   V +AL+ MY  CG++  A +V E  +    D +S+N M+ G 
Sbjct: 334 GEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDD--DVVSWNSMIVGC 391

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-GYQVHAQAMKSGFEAYTSV 325
              G  EEA++ F+ M   +++    TF SV++ C+  R+ G  VH   +K+GFE Y  V
Sbjct: 392 VRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRIDGKSVHCLVIKTGFENYKLV 451

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA + MY+    ++ A  +F ++ EKD++SW ++++ Y Q      ++  + +M+  G+
Sbjct: 452 SNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISGV 511

Query: 386 RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD+F   S+L++   + ++E    +H+     G+ +++ V+N+L++ YAK   +  A  
Sbjct: 512 SPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDADA 571

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF +M  R++ITW  LI G+  NG     L++F ++                    +I  
Sbjct: 572 IFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQM-------------------KKIYG 612

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
           +  G + +                 MI L+ + G LD +  + N M ++ D   W AL++
Sbjct: 613 IEPGPEHYA---------------CMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLA 657

Query: 562 AYAQHG 567
           A   HG
Sbjct: 658 ACRVHG 663



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 213/439 (48%), Gaps = 42/439 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G    A+  F  +H+   ++ + ++  + L AC+++    FG Q+H   +R G    
Sbjct: 291 AQNGDDHKAIEFFRYMHTE-GVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGCN 349

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            +V + ++ +Y    DL S KRV   +++ DV SW + +  C + G              
Sbjct: 350 AYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHG-------------- 395

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
                            +E+  I LF++MH  +++ D+Y+F SVL+ C  G ++ G+ +H
Sbjct: 396 -----------------FEEEAILLFKKMHARNMKIDHYTFPSVLNCCIVGRID-GKSVH 437

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            LV K+GF     V NAL+ MY    ++  A  VFE  K +  D IS+  ++ G    G 
Sbjct: 438 CLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFE--KMFEKDVISWTSLVTGYTQNGS 495

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            EE+L  F DM ++ + P +    S++SAC        G QVH+  +K G  +  SV+N+
Sbjct: 496 HEESLKTFCDMRISGVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNS 555

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRP 387
            +TMY+ CG +D+A  IF  +  +D+++W  +I  YA+   GR ++  + +M+ + GI P
Sbjct: 556 LVTMYAKCGCLDDADAIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKKIYGIEP 615

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISA---YAKNERIKQAYQIF 444
               +  ++   G +  ++     +    +  +  V  AL++A   +   E  ++A    
Sbjct: 616 GPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWKALLAACRVHGNLELGERAATNL 675

Query: 445 HNMSPRNIITWNTLINGFL 463
             + P N + +  L N +L
Sbjct: 676 FELEPMNAMPYVMLSNMYL 694


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 225/709 (31%), Positives = 357/709 (50%), Gaps = 43/709 (6%)

Query: 31   LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
            LS +G+ ++AL  + Q+     +  +  + +T ++ C +L N   G Q+ +  + +GL+ 
Sbjct: 422  LSSNGYLEEALRAYRQMRRD-GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 480

Query: 91   YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
               VAN++++++ N                               +G V  A ++FD+M 
Sbjct: 481  QVSVANSLITMFGN-------------------------------LGRVHDAEKLFDRME 509

Query: 151  DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
            + D   +NAMI+  +  G       +F +M    +R D  +  S++SVC  +     G  
Sbjct: 510  EHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSG 569

Query: 210  LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            +HSL  +S     V+V+NAL+ MY   G + DA  +F        D IS+N M+      
Sbjct: 570  IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR--DLISWNTMISSYVQN 627

Query: 270  GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
                +AL     +   +  P+ LTF S + AC  P     G  VHA  ++   +    V 
Sbjct: 628  CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 687

Query: 327  NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            N+ ITMY  C  +++A  +F  +   DIVS+N +I  YA    G  A+  +  M+S GI+
Sbjct: 688  NSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIK 747

Query: 387  PDEFTF----GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            P+  T     GS  +S+        +HA++   G +++  V+N+LI+ YAK   ++ +  
Sbjct: 748  PNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTN 807

Query: 443  IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            IF++++ +NI++WN +I   +  G   + L+ F ++  +  + D   L+  LSSCA ++S
Sbjct: 808  IFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLAS 867

Query: 503  LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            L  G Q+HG  +K+ L S   + NA + +Y KCG +D  L+V      +    WN LIS 
Sbjct: 868  LEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISG 927

Query: 563  YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
            YA++G  KEA   FK M   GR KPD  TF A+LSACSHAGLVD G   ++SM + +G  
Sbjct: 928  YAKYGYFKEAEETFKQMVATGR-KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVS 986

Query: 623  PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
            P   H  C++DLLGR G   EAE+ I    +      W +L S+   H NL +GR  A  
Sbjct: 987  PGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKK 1046

Query: 683  LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE +    S YVLLSN+YA    W +   +R  +K   + K+P CSW+
Sbjct: 1047 LLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWL 1095



 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 187/631 (29%), Positives = 318/631 (50%), Gaps = 53/631 (8%)

Query: 58  YSLSTTLAACANL---RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS-VKR 113
           ++L++ + AC         A G  +HA   RAGL    ++   +L LY  +R +VS  +R
Sbjct: 344 FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLY-GSRGIVSDAQR 402

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +F E+   +V SWT  + A +  G+++ A   + +M    +P        C  N      
Sbjct: 403 LFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVP--------CNAN------ 448

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALI 230
                            +FA+V+S+C  G LE    G Q+ S V  SG    VSV N+LI
Sbjct: 449 -----------------AFATVVSLC--GSLENEVPGLQVASQVIVSGLQNQVSVANSLI 489

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TM+ N G V DA K+F+  + +  D IS+N M+   +  G   +  + F DM    LRP 
Sbjct: 490 TMFGNLGRVHDAEKLFDRMEEH--DTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 547

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             T  S+MS C        G  +H+  ++S  ++  +V NA + MYS+ GK+ +A  +F 
Sbjct: 548 ATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 607

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            +  +D++SWNTMIS+Y Q      A+    ++      P+  TF S L   +S G +  
Sbjct: 608 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALID 667

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +M+HA V    +  N+ V N+LI+ Y K   ++ A ++F +M   +I+++N LI G+ +
Sbjct: 668 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAV 727

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMS 523
                + +Q FS +  + ++P+  T+     S A  + L  +G+ +H Y+++   +S   
Sbjct: 728 LEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY 787

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + N++IT+YAKCG+L+ S  +FN +  K+ +SWNA+I+A  Q G G+EA+  F  MQ  G
Sbjct: 788 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAG 847

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             K D+      LS+C+    +++G ++   +    G       ++  +D+ G+ G +DE
Sbjct: 848 N-KLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSDSYVVNAAMDMYGKCGKMDE 905

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLR 674
             +V+  Q I+ +   W  L S  A +G  +
Sbjct: 906 MLQVVPDQAIRPQ-QCWNTLISGYAKYGYFK 935



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/517 (29%), Positives = 270/517 (52%), Gaps = 15/517 (2%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----- 199
           +FD+M DR    +   ++GC   G       + R M +  V    ++ AS+++ C     
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D G +  G  +H+L  ++G    V +  AL+ +Y + G V DA ++F E      + +S+
Sbjct: 359 DEG-IACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPER--NVVSW 415

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMK 316
             +M  L+S G +EEAL  +R M    +  +   F +V+S C  L   V G QV +Q + 
Sbjct: 416 TALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIV 475

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG +   SV+N+ ITM+ + G++ +A  +F R++E D +SWN MIS Y+ + +     L 
Sbjct: 476 SGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLV 535

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M+  G+RPD  T  SL+   ASS        IH+    + + +++ V NAL++ Y+ 
Sbjct: 536 FSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSA 595

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             ++  A  +F NMS R++I+WNT+I+ ++ N      L+   +L  +   P+  T S A
Sbjct: 596 AGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSA 655

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +C+   +L  GK +H  VL+ +L   + +GN++IT+Y KC  ++ + +VF  M   D 
Sbjct: 656 LGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDI 715

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +S+N LI  YA   +G +A+  F  M+  G IKP+  T   +  + + +  + +  R   
Sbjct: 716 VSYNVLIGGYAVLEDGTKAMQVFSWMRSAG-IKPNYITMINIHGSFASSNDLHNYGRPLH 774

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           + +   GF+  E   + ++ +  + G L+ +  + NS
Sbjct: 775 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 811



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVK---RVFSEIQNPDVYSWTTFLSACTK 135
           +H  A+R  L       NT+L+ Y   RD  +      +F E+ +    +W T +S C +
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 136 MGHVDYACEVFDKMPDRDLPVYN----AMITGCTENGYEDIGIGLFREMHKLDVR 186
            G    A E+   M +R +P+      +++T C   G  D GI     +H L  R
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRG-RDEGIACGAAIHALTHR 151


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 207/688 (30%), Positives = 361/688 (52%), Gaps = 20/688 (2%)

Query: 61  STTLAACANLRNAAFGN-----QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           S TLA    LR  +        ++ A  ++ G       +N I+        + + ++V+
Sbjct: 12  SRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVY 71

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            E+ + +  S  T +S   K G V  A ++FD MPDR +  +  ++     N + D    
Sbjct: 72  DEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFK 131

Query: 176 LFREMHKLD--VRRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSC--LVSVVNALI 230
           LFR+M +       D+ +F ++L  C+  + +    Q+H+   K GF     ++V N L+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
             Y     +  AC +FEE      D +++N ++ G    G   E++  F  M  +  +PS
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEK--DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249

Query: 291 ELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           + TF  V+ A +      +G Q+HA ++ +GF    SV N  +  YS   ++ E  M+F 
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            + E D VS+N +IS+Y+Q +   +++  + EMQ +G     F F ++L   A+   ++M
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              +H    +    + + V N+L+  YAK E  ++A  IF ++  R  ++W  LI+G++ 
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
            G    GL+ F+++  S LR D+ T +  L + A  +SL  GKQ+H +++++  +  +  
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           G+ ++ +YAKCG +  +++VF  M +++ +SWNALISA+A +G+G+ A+  F  M + G 
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG- 548

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           ++PD  +   VL+ACSH G V+ GT  F +M   YG  P + H +CMLDLLGR G   EA
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK-PSVYVLLSNIYAA 703
           E++++    +     W ++ +AC  H N  L    A  L   E+ +  + YV +SNIYAA
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AG WE+  ++++ ++  G+ K P  SW+
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWV 696



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 151/554 (27%), Positives = 268/554 (48%), Gaps = 59/554 (10%)

Query: 32  SRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           +R+ H+ +A  LF Q+  SS    PD  + +T L  C +        Q+HA+A++ G   
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180

Query: 91  YPH--VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
            P   V+N +L  Y   R L                               D AC +F++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRL-------------------------------DLACVLFEE 209

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-- 206
           +P++D   +N +ITG  ++G     I LF +M +   +  +++F+ VL     GL +F  
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-VGLHDFAL 268

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH+L   +GFS   SV N ++  Y     V++   +F+E      D +SYNV++   
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL--DFVSYNVVISSY 326

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMS--ACLCP-RVGYQVHAQAMKSGFEAYT 323
           +   + E +L  FR+M           F +++S  A L   ++G Q+H QA+ +  ++  
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V N+ + MY+ C   +EA +IF  L ++  VSW  +IS Y Q+ L  + +  + +M+  
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446

Query: 384 GIRPDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            +R D+ TF ++L AS+ F  ++  + +HAF+  +G + N+   + L+  YAK   IK A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            Q+F  M  RN ++WN LI+    NG     +  F++++ S L+PD  ++   L++C+  
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566

Query: 501 SSLRHGKQ-------IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKD 552
             +  G +       I+G   K    +       M+ L  + G    + ++ + M  E D
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYA------CMLDLLGRNGRFAEAEKLMDEMPFEPD 620

Query: 553 TISWNALISAYAQH 566
            I W+++++A   H
Sbjct: 621 EIMWSSVLNACRIH 634



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 201/450 (44%), Gaps = 45/450 (10%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +    + G Y +++HLF+++  S   +P  ++ S  L A   L + A G QLHA
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHA 274

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            ++  G      V N IL  Y     ++  + +F                          
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF-------------------------- 308

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CD 200
                D+MP+ D   YN +I+  ++    +  +  FREM  +   R N+ FA++LS+  +
Sbjct: 309 -----DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
              L+ GRQLH     +    ++ V N+L+ MY  C    +A  +F+         +S+ 
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT--VSWT 421

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
            ++ G    G     L  F  M  ++LR  + TF +V+ A        +G Q+HA  ++S
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G        +  + MY+ CG I +A  +F  + +++ VSWN +IS +A    G +AI A+
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541

Query: 378 LEMQSVGIRPDEFT-FGSLLASS--GFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
            +M   G++PD  +  G L A S  GF+E   E   A   I GI    +    ++    +
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601

Query: 434 NERIKQAYQIFHNM--SPRNIITWNTLING 461
           N R  +A ++   M   P  I+ W++++N 
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIM-WSSVLNA 630


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 239/785 (30%), Positives = 390/785 (49%), Gaps = 118/785 (15%)

Query: 28   LANLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
            +++L + GH Q+++HL  ++     ++ P+IY     L  C   R    G Q+HA  L+ 
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYG--ELLQGCVYERALHTGQQIHARILKN 1203

Query: 87   G-LKAYPHVANTILSLYKNARDLVSVK-RVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            G   A      T L ++    D   V  R+F  ++  +V+SW   +    +MG       
Sbjct: 1204 GDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFS----- 1258

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                     ED  +G F EM +  V  DN+   +VL  C +  L
Sbjct: 1259 -------------------------EDALLG-FIEMQENGVFPDNFVLPNVLKACGSLQL 1292

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            +  G+ +H  V K GF   V V ++L+ MY  CG + DA KVF+       + +++N M+
Sbjct: 1293 IGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMI 1350

Query: 264  DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             G    G  +EA+  F DM V  + P+ +T  S +SA         G Q HA A+ +  +
Sbjct: 1351 VGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLD 1410

Query: 321  AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLE 379
                + ++ I  YS  G I++A ++F+R+ EKD+V+WN +IS+Y Q + +G++  + +L 
Sbjct: 1411 LDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHL- 1469

Query: 380  MQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
            M+S  +R D  T  S+L++S     I++ +  H +     + +++ V+N++I  YAK ER
Sbjct: 1470 MRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCER 1529

Query: 437  IK-------------------------------QAYQIFHNMS----PRNIITWNTLING 461
            I                                +A ++F+ M     P N+I+WN++I G
Sbjct: 1530 IDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILG 1589

Query: 462  FLLNG-----------------------------------FPVQGLQHFSELLMSELRPD 486
            FL NG                                   F  + +  F ++  + +RP 
Sbjct: 1590 FLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPS 1649

Query: 487  EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
              +++  L +C  I SL +G+ IHG++ ++     + +  +++ +YAKCG +D + +VF+
Sbjct: 1650 IASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFH 1709

Query: 547  MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            MM  K+   +NA+ISAYA HG+  EA++ FK +Q  G I+PD  TFT++LSACSHAGLV+
Sbjct: 1710 MMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEG-IEPDSITFTSILSACSHAGLVN 1768

Query: 607  DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            +G  +F  MV+ +   P  +H  C++ LL R G LDEA R+I +   Q  +    +L +A
Sbjct: 1769 EGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTA 1828

Query: 667  CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
            C  H  + LG  ++  L + E      YV LSN YAAAG W E +N+R+L+K  G+ K P
Sbjct: 1829 CREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNP 1888

Query: 727  GCSWI 731
            GCSWI
Sbjct: 1889 GCSWI 1893



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 186/351 (52%), Gaps = 9/351 (2%)

Query: 258  SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQA 314
            SY   +  L   G ++E++    +M     +     +  ++  C+  R    G Q+HA+ 
Sbjct: 1141 SYFHHISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARI 1200

Query: 315  MKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            +K+G  F     V    +  Y+ C   + A  +F RL+ +++ SW  ++    +      
Sbjct: 1201 LKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSED 1260

Query: 373  AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
            A+L ++EMQ  G+ PD F   ++L + G ++++ +   +H +V   G    + VS++L+ 
Sbjct: 1261 ALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVD 1320

Query: 430  AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
             Y K   ++ A ++F +M  +N++TWN++I G++ NG   + +  F ++ +  + P   T
Sbjct: 1321 MYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVT 1380

Query: 490  LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            ++  LS+ A + +L  GKQ H   + N+L     LG+++I  Y+K G ++ +  VF+ M+
Sbjct: 1381 VASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRML 1440

Query: 550  EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            EKD ++WN LIS+Y QH +  +A++    M+    ++ D  T +++LSA +
Sbjct: 1441 EKDVVTWNLLISSYVQHHQVGKALNMCHLMRS-ENLRFDSVTLSSILSASA 1490


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 353/714 (49%), Gaps = 42/714 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +  G +  AL  ++++  +  + PD Y+    + AC  L++   G  +H    
Sbjct: 27  NWMIRGFTMMGQFNYALLFYLKMLGA-GVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GLK    V ++++ LY                                + GH+  A  
Sbjct: 86  LMGLKEDVFVGSSLIKLY-------------------------------AENGHLSDAQY 114

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +FD +P +D  ++N M+ G  +NG     I +F EM   +++ ++ +FA VLSVC +  +
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G QLH +    G      V N L+ MY  C  +  A K+F+       D +S+N ++
Sbjct: 175 LDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQ--SDLVSWNGII 232

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G    G + EA   FR M+ A ++P  +TF S +      L  +   ++H   ++    
Sbjct: 233 SGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVV 292

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + +A I +Y  C  ++ A     +    D V   TMIS Y      + A+ A+  +
Sbjct: 293 LDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWL 352

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               ++P   TF S+    A    + + + +H  +    +     V +A++  YAK  R+
Sbjct: 353 VQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRL 412

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F+ ++ ++ I WN++I     NG P + +  F ++ M   R D  ++S ALS+C
Sbjct: 413 DLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSAC 472

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +L +GK+IHG ++K  L S +   +++I +YAKCG+L+ S RVF+ M EK+ +SWN
Sbjct: 473 ANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWN 532

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++ISAY  HG+ KE ++ F  M   G I+PD  TF  ++SAC HAG VD+G R +  M  
Sbjct: 533 SIISAYGNHGDLKECLALFHEMLRNG-IQPDHVTFLGIISACGHAGQVDEGIRYYHLMTE 591

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           +YG     +H +C+ D+ GRAG L EA   INS      +  W  L  AC  HGN+ L  
Sbjct: 592 EYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAE 651

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L + +      YVLL+N+ A AG W +   +R ++K  GV K PG SWI
Sbjct: 652 VASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWI 705



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 233/447 (52%), Gaps = 13/447 (2%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G++ DA  +F   +   C   ++N M+ G   +G+   AL+ +  ML A + P +
Sbjct: 1   MYVRTGSLKDAKNLFYTLQ-LGCTS-AWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDK 58

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF  V+ AC      ++G  VH      G +    V ++ I +Y+  G + +A  +F  
Sbjct: 59  YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           + +KD V WN M++ Y +     +AI  +LEM+   I+P+  TF  +L   AS   +++ 
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H      G+  +  V+N L++ Y+K + ++ A ++F  +   ++++WN +I+G++ N
Sbjct: 179 TQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   +    F  ++ + ++PD  T +  L     + SL+H K+IHGY++++ ++  + L 
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+I +Y KC D++ + +        DT+    +IS Y  +G+ KEA+  F+ +    R+
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ-ERM 357

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEA 644
           KP   TF+++  A +    ++ G  +  S++     +  + H+ S +LD+  + G LD A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTK--LDEKCHVGSAILDMYAKCGRLDLA 415

Query: 645 ERVINSQHIQARSDNWWALFSACAAHG 671
            RV N +  +  +  W ++ ++C+ +G
Sbjct: 416 CRVFN-RITEKDAICWNSMITSCSQNG 441


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  351 bits (901), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 219/733 (29%), Positives = 363/733 (49%), Gaps = 57/733 (7%)

Query: 49  SSHKLKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           SS++  P    + S     C++ +    G Q HA  +    K    V N ++ +Y    D
Sbjct: 33  SSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSD 92

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR--------------- 152
           L    +VF  +   D  SW   L      G +  A ++FD MP                 
Sbjct: 93  LGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRM 152

Query: 153 ----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-------------DNYSFASV 195
               D   +  ++  C+    ED G G+  ++H L V+              D Y+   V
Sbjct: 153 GTVFDRTTFAVVLKSCSS--LEDHGGGI--QIHGLAVKMGFDCDVVTGSALLDMYAKCCV 208

Query: 196 LSVCDAGLLEFGR----------QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC-K 244
            +    G LE  +          QLH    K+ F   V +  A + MY  C N+ D   +
Sbjct: 209 QNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQ 268

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           +F     +  +  SYN ++ G A   +  EAL  FR +  + L   E++      AC   
Sbjct: 269 LFNSLPNH--NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVI 326

Query: 305 R---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
           +    G QVH  +MKS  ++   V+NA + MY  CG + EAC++F  +  +D VSWN +I
Sbjct: 327 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 386

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGII 418
           + + Q       +  ++ M   G+ PDEFT+GS+L +    + +     IH  +  + + 
Sbjct: 387 AAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMG 446

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +  V  ALI  Y+K   +++A ++   ++ + +++WN +I+GF L     +  + FS++
Sbjct: 447 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKM 506

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L   + PD +T +  L +CA + ++  GKQIH  ++K  L S   + + ++ +Y+KCG++
Sbjct: 507 LEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNM 566

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
                +F     +D ++WNA++  YAQHG G+EA+  F+ MQ +  +KP+ ATF AVL A
Sbjct: 567 QDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQ-LENVKPNHATFLAVLRA 625

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C H GLV+ G   F SM+++YG  P  +H SC++D++GR+G + +A  +I     +A + 
Sbjct: 626 CGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAV 685

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L S C  HGN+ +    A  +L+ E +  + YVLLSNIYA AG+W E   +R++++
Sbjct: 686 IWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMR 745

Query: 719 RTGVIKQPGCSWI 731
             G+ K+PGCSWI
Sbjct: 746 FNGLKKEPGCSWI 758



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 211/458 (46%), Gaps = 49/458 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   +RS    +AL +F  +  S  L  D  SLS    ACA ++    G Q+H
Sbjct: 278 LQSYNAIIVGYARSDKGIEALGMFRLLQKS-GLGLDEVSLSGAXRACAVIKGDLEGLQVH 336

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             ++++  ++   VAN IL +Y     LV    VF E+ + D  SW              
Sbjct: 337 GLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSW-------------- 382

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NA+I    +NG E+  + LF  M +  +  D +++ SVL  C 
Sbjct: 383 -----------------NAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKAC- 424

Query: 201 AGL--LEFGRQLHSLVTKS--GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           AG   L  G ++H+ + KS  G    V +  ALI MY  CG +  A K+ +         
Sbjct: 425 AGWQALNCGMEIHNRIIKSRMGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLAEQTV-- 480

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           +S+N ++ G +   + EEA   F  ML   + P   T+ +++  C   +   +G Q+HAQ
Sbjct: 481 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 540

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K   ++   +S+  + MYS CG + +  +IF +   +D V+WN M+  YAQ  LG  A
Sbjct: 541 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 600

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALIS 429
           +  +  MQ   ++P+  TF ++L + G + +VE      H+ +   G+   ++  + ++ 
Sbjct: 601 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 660

Query: 430 AYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
              ++ ++ +A ++   M    + + W TL++   ++G
Sbjct: 661 IMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHG 698


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 208/612 (33%), Positives = 328/612 (53%), Gaps = 11/612 (1%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  +S   K G    A  VF+ +  +   +Y+ M+ G  +N      +  F  M   +VR
Sbjct: 83  TKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR 142

Query: 187 RDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
                +A +L +C   L L+ GR++H L+  +GF   + V+ A++++Y  C  + +A K+
Sbjct: 143 LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKM 202

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--- 302
           FE  +    D +S+  ++ G A  G  + AL     M  A  +P  +T VS++ A     
Sbjct: 203 FERMQHK--DLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMK 260

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G  +H  A +SGFE+  +V+NA + MY  CG    A ++F  ++ K +VSWNTMI 
Sbjct: 261 ALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMID 320

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIIT 419
             AQ      A   +L+M   G  P   T  G LLA +  G +E    +H  +    + +
Sbjct: 321 GCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDS 380

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N+ V N+LIS Y+K +R+  A  IF+N+   N+ TWN +I G+  NG   + L  F  + 
Sbjct: 381 NVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFCMMQ 439

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              ++ D +TL   +++ A  S  R  K IHG  ++  + + + +  A++ +YAKCG + 
Sbjct: 440 SQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIK 499

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + ++F+MM E+  I+WNA+I  Y  HG GKE +  F  MQ  G +KP+  TF +V+SAC
Sbjct: 500 TARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQK-GAVKPNDITFLSVISAC 558

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH+G V++G  +F SM  DY   P  DH S M+DLLGRAG LD+A   I    I+     
Sbjct: 559 SHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISV 618

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
             A+  AC  H N+ LG   A  L + + D+   +VLL+NIYA+  +W++ A +R  ++ 
Sbjct: 619 LGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMED 678

Query: 720 TGVIKQPGCSWI 731
            G+ K PGCSW+
Sbjct: 679 KGLHKTPGCSWV 690



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 164/582 (28%), Positives = 271/582 (46%), Gaps = 47/582 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           +I L   +++    DAL  F+++    +++  +   +  L  C    +   G ++H   +
Sbjct: 114 HIMLKGYAKNSSLGDALCFFLRMMCD-EVRLVVGDYACLLQLCGENLDLKKGREIHGLII 172

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G ++   V   ++SLY   R + +  ++F  +Q+ D+ SWTT                
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTT---------------- 216

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
                          ++ G  +NG+    + L  +M +   + D+ +  S+L +V D   
Sbjct: 217 ---------------LVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR +H    +SGF  LV+V NAL+ MYF CG+   A  VF+  +      +S+N M+
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTV--VSWNTMI 319

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
           DG A  G  EEA   F  ML     P+ +T + V+ AC        G+ VH    K   +
Sbjct: 320 DGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLD 379

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV N+ I+MYS C ++D A  IF  L EK  V+WN MI  YAQ    + A+  +  M
Sbjct: 380 SNVSVMNSLISMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMM 438

Query: 381 QSVGIRPDEFTF-GSLLASSGFI--EMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           QS GI+ D FT  G + A + F      + IH       +  N+ VS AL+  YAK   I
Sbjct: 439 QSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAI 498

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           K A ++F  M  R++ITWN +I+G+  +G   + L  F+E+    ++P++ T    +S+C
Sbjct: 499 KTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISAC 558

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           +    +  G  +   + ++  L   M   +AM+ L  + G LD +      M  K  IS 
Sbjct: 559 SHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISV 618

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
             A++ A   H   K      KA Q + ++ PD+  +  +L+
Sbjct: 619 LGAMLGACKIH---KNVELGEKAAQKLFKLDPDEGGYHVLLA 657



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 161/317 (50%), Gaps = 4/317 (1%)

Query: 295 VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           V ++  C   +  YQ+    +K+GF          I+++   G   EA  +F  ++ K  
Sbjct: 51  VVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLD 110

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAF 411
           V ++ M+  YA+ +    A+  +L M    +R     +  LL   G    ++    IH  
Sbjct: 111 VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           +  NG  +N+ V  A++S YAK  +I  AY++F  M  +++++W TL+ G+  NG   + 
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           LQ   ++  +  +PD  TL   L + A + +LR G+ IHGY  ++   S +++ NA++ +
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDM 290

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y KCG    +  VF  M  K  +SWN +I   AQ+GE +EA + F  M D G + P + T
Sbjct: 291 YFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEV-PTRVT 349

Query: 592 FTAVLSACSHAGLVDDG 608
              VL AC++ G ++ G
Sbjct: 350 MMGVLLACANLGDLERG 366



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 3/264 (1%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           I  F+  NG          +IS + K     +A ++F ++  +  + ++ ++ G+  N  
Sbjct: 66  ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSS 125

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               L  F  ++  E+R      +  L  C     L+ G++IHG ++ N   S + +  A
Sbjct: 126 LGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTA 185

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +++LYAKC  +D + ++F  M  KD +SW  L++ YAQ+G  K A+     MQ+ G+ KP
Sbjct: 186 VMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQ-KP 244

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  T  ++L A +    +  G  I        GF    +  + +LD+  + G    A  V
Sbjct: 245 DSVTLVSILPAVADMKALRIGRSIHGYAFRS-GFESLVNVTNALLDMYFKCGSARIARLV 303

Query: 648 INSQHIQARSDNWWALFSACAAHG 671
                 +    +W  +   CA +G
Sbjct: 304 FKGMRSKTVV-SWNTMIDGCAQNG 326


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 209/597 (35%), Positives = 310/597 (51%), Gaps = 74/597 (12%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK----------------- 250
           R +H+ V KSGFS  V + N LI  Y  CG++ D  ++F++                   
Sbjct: 40  RCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKL 99

Query: 251 GYVC------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           G++             D  ++N M+ G A   R EEAL  F  M       +E TF S +
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGL 159

Query: 299 SACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           SAC        G Q+H+   KS   +   + +A + MYS CG +++A  +F  + ++++V
Sbjct: 160 SACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVV 219

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
           SWN++I+ Y Q      A+  +  M    + PDE T  S++   AS   I++ + +HA V
Sbjct: 220 SWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARV 279

Query: 413 F-INGIITNIQVSNALISAYAKNERIKQAYQIFHN------------------------- 446
             ++ +  +I +SNA +  YAK  RIK+A  IF +                         
Sbjct: 280 VKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAA 339

Query: 447 ------MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
                 M+ RN+++WN LI G+  NG   + L  F  L    + P  YT +  L +CA +
Sbjct: 340 RLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADL 399

Query: 501 SSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           + L  G Q H +VLK+           + +GN++I +Y KCG ++    VF  M+E+D +
Sbjct: 400 ADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCV 459

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWNA+I  +AQ+G G EA+  F+ M D G  KPD  T   VLSAC HAG V++G   F S
Sbjct: 460 SWNAMIIGFAQNGYGNEALELFREMLDSGE-KPDHITMIGVLSACGHAGFVEEGRHYFSS 518

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  D+G  P  DH +CM+DLLGRAG+L+EA+ +I    +Q  S  W +L +AC  H N+ 
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNIT 578

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LG+ +A  L E E      YVLLSN+YA  G W +A N+R+L+++ GV KQPGCSWI
Sbjct: 579 LGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 279/570 (48%), Gaps = 58/570 (10%)

Query: 52  KLKPDIYSLSTT------LAACANLRNAAFGNQ-LHAYALRAGLKAYPHVANTILSLYKN 104
           KL  D+ S + +      L +C  L+ +A   + +HA  +++G      + N ++  Y  
Sbjct: 8   KLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAK 67

Query: 105 ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC 164
              L   +++F ++   +V++W + ++  TK+G +D A  +F  MP+RD   +N+M++G 
Sbjct: 68  CGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR--QLHSLVTKSGFSCL 222
            ++   +  +  F  MHK     + Y+FAS LS C +GL +  R  Q+HSL+ KS     
Sbjct: 128 AQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSAC-SGLNDMNRGVQIHSLIAKSPCLSD 186

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
           V + +AL+ MY  CGNV DA +VF+E      + +S+N ++      G   EAL  F+ M
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQQVFDEMGDR--NVVSWNSLITCYEQNGPAVEALKVFQVM 244

Query: 283 LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSSCGK 338
           L + + P E+T  SV+SAC      +VG +VHA+ +K         +SNA + MY+ C +
Sbjct: 245 LESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSR 304

Query: 339 IDEACMI-------------------------------FARLQEKDIVSWNTMISTYAQR 367
           I EA  I                               F ++ E+++VSWN +I+ Y Q 
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASS--------GFIEMVEMI-HAFVFINGII 418
                A+  +  ++   + P  +TF ++L +         G    V ++ H F F +G  
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEE 424

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +I V N+LI  Y K   +++ Y +F  M  R+ ++WN +I GF  NG+  + L+ F E+
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGD 537
           L S  +PD  T+   LS+C     +  G+     + ++  ++ +      M+ L  + G 
Sbjct: 485 LDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544

Query: 538 LDCSLRVFNMM-IEKDTISWNALISAYAQH 566
           L+ +  +   M ++ D++ W +L++A   H
Sbjct: 545 LEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 173/358 (48%), Gaps = 54/358 (15%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-- 462
           V  +HA V  +G    + + N LI AYAK   ++   Q+F  M  RN+ TWN+++ G   
Sbjct: 39  VRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTK 98

Query: 463 ------------------------LLNGFPV-----QGLQHFSELLMSELRPDEYTLSVA 493
                                   +++GF       + L +F+ +       +EYT +  
Sbjct: 99  LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASG 158

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           LS+C+ ++ +  G QIH  + K+  +S + +G+A++ +Y+KCG+++ + +VF+ M +++ 
Sbjct: 159 LSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNV 218

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI-- 611
           +SWN+LI+ Y Q+G   EA+  F+ M +   ++PD+ T  +V+SAC+    +  G  +  
Sbjct: 219 VSWNSLITCYEQNGPAVEALKVFQVMLE-SWVEPDEVTLASVISACASLSAIKVGQEVHA 277

Query: 612 ----FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ---ARSDNWWALF 664
                D + ND     A       +D+  +   + EA  + +S  I+   A +    ++ 
Sbjct: 278 RVVKMDKLRNDIILSNA------FVDMYAKCSRIKEARFIFDSMPIRNVIAET----SMV 327

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           S  A   + +  R++   + ER  +  S   L++  Y   G  EEA ++  LLKR  V
Sbjct: 328 SGYAMAASTKAARLMFTKMAER--NVVSWNALIAG-YTQNGENEEALSLFCLLKRESV 382



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 180/379 (47%), Gaps = 35/379 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LKAY 91
           ++G   +AL +F Q+     ++PD  +L++ ++ACA+L     G ++HA  ++   L+  
Sbjct: 230 QNGPAVEALKVF-QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRND 288

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             ++N  + +Y     +   + +F  +   +V + T+ +S          A  +F KM +
Sbjct: 289 IILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAE 348

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           R++  +NA+I G T+NG  +  + LF  + +  V   +Y+FA++L  C D   L  G Q 
Sbjct: 349 RNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQA 408

Query: 211 HSLVTKSGFSCL------VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           H  V K GF         + V N+LI MY  CG V +   VF +     C  +S+N M+ 
Sbjct: 409 HVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC--VSWNAMII 466

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
           G A  G   EAL  FR+ML +  +P  +T + V+SAC         HA  ++ G   ++S
Sbjct: 467 GFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSAC--------GHAGFVEEGRHYFSS 518

Query: 325 VSN----AAITMYSSC--------GKIDEACMIFARLQ-EKDIVSWNTMIST-YAQRN-- 368
           ++     A +  + +C        G ++EA  I   +  + D V W ++++     RN  
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNIT 578

Query: 369 LGRSAILAYLEMQSVGIRP 387
           LG+       E+++    P
Sbjct: 579 LGKYVAEKLFEVETSNSGP 597



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 138/340 (40%), Gaps = 67/340 (19%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  +++G  ++AL LF  +     + P  Y+ +  L ACA+L +   G Q H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLL-KRESVCPTHYTFANILKACADLADLHLGMQAH 409

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + L+ G K                         F   +  D++   + +    K G V+
Sbjct: 410 VHVLKHGFK-------------------------FQSGEEDDIFVGNSLIDMYVKCGCVE 444

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
               VF KM +RD   +NAMI G  +NGY +  + LFREM     + D+ +   VLS C 
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACG 504

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AG +E GR   S +T+                 F    + D                 Y
Sbjct: 505 HAGFVEEGRHYFSSMTRD----------------FGVAPLRD----------------HY 532

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
             M+D L   G +EEA     +M V   +P  + + S+++AC   R    +     +  F
Sbjct: 533 TCMVDLLGRAGFLEEAKSIIEEMPV---QPDSVIWGSLLAACKVHR-NITLGKYVAEKLF 588

Query: 320 EAYTSVSNAAI---TMYSSCGKIDEACMIFARLQEKDIVS 356
           E  TS S   +    MY+  GK  +A M   +L  K+ V+
Sbjct: 589 EVETSNSGPYVLLSNMYAELGKWGDA-MNVRKLMRKEGVT 627


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 231/689 (33%), Positives = 345/689 (50%), Gaps = 50/689 (7%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P   S  T L    + R+   G  LHA  +++   +  ++AN++++LY   + L   K V
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG- 173
           F  IQN DV S                               +N +I G +++G      
Sbjct: 63  FERIQNKDVVS-------------------------------WNCIINGYSQHGPSGSSH 91

Query: 174 -IGLFREMHKLDVRRDNYSFASVLS----VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
            + LF+ M   +   + ++FA V +    + DA     GR  H++  K      V V ++
Sbjct: 92  VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAA---GGRLAHAVAIKMDSCRDVFVGSS 148

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY   G   +A KVF+       + +S+  M+ G AS     EAL  FR M      
Sbjct: 149 LMNMYCKAGLTPEARKVFDTMPER--NSVSWATMISGYASQKLAAEALGLFRLMRREEEG 206

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            +E  F SV+SA   P +   G Q+H  A+K+G  +  SV NA +TMY+ CG +D+A   
Sbjct: 207 ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQT 266

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEM 404
           F    +K+ ++W+ MI+ YAQ      A+  +  M   GIRP EFTF G + A S     
Sbjct: 267 FETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAA 326

Query: 405 VE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            E   +H ++   G  + I V  AL+  YAK   I  A + F  +   +I+ W ++I G+
Sbjct: 327 WEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGY 386

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + NG     L  +  + M  + P+E T++  L +C+ +++L  GKQIH   +K     ++
Sbjct: 387 VQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEV 446

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +G+A+ T+YAKCG L     VF  M  +D ISWNA+IS  +Q+G GKEA+  F+ MQ  
Sbjct: 447 PIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G  KPD  TF  +LSACSH GLV+ G   F  M +++G  P  +H +CM+D+L RAG L 
Sbjct: 507 G-TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLK 565

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EA     S  I      W  +  AC  + N  LG      L+E    + S YVLLS+IY+
Sbjct: 566 EAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYS 625

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A G WE+   +R ++K  GV K+PGCSWI
Sbjct: 626 ALGRWEDVERVRRMMKLRGVSKEPGCSWI 654



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 35/275 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   ++SG    AL LF  +H S  ++P  ++    + AC++L  A  G Q+H Y L+ G
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLS-GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++  +V   ++ +Y     +V  ++ F  +Q PD+  WT+                   
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS------------------- 381

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                       MI G  +NG  +  + L+  M    +  +  + ASVL  C +   LE 
Sbjct: 382 ------------MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQ 429

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+H+   K GF   V + +AL TMY  CG + D   VF        D IS+N M+ GL
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR--DVISWNAMISGL 487

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  G  +EAL  F +M +   +P  +TFV+++SAC
Sbjct: 488 SQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  +DAL L+ ++     L P+  ++++ L AC++L     G Q+HA  ++ G     
Sbjct: 388 QNGENEDALSLYGRMEMEGIL-PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEV 446

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM--- 149
            + + + ++Y     L     VF  +   DV SW   +S  ++ G    A E+F++M   
Sbjct: 447 PIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506

Query: 150 -PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS 191
               D   +  +++ C+  G  + G G FR M     +D R ++Y+
Sbjct: 507 GTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYA 552


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 226/711 (31%), Positives = 357/711 (50%), Gaps = 44/711 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G +  A+ LF ++ S       +  LS  L ACA L     G  +H Y++++GL     
Sbjct: 283 NGWHGTAVDLFSKMWSQGTEISSVTVLSV-LPACAGLGYGLIGKAVHGYSVKSGL----- 336

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR- 152
                         L  +  V S I +  + S   F+    K G +  A  VFD M  + 
Sbjct: 337 --------------LWGLDSVQSGIDDAALGSKLVFMY--VKCGDMASARRVFDAMSSKG 380

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA------SVLSVCDAGLLEF 206
           ++ V+N ++ G  + G  +  + LF +MH+L +  D ++ +      + LS    GL+  
Sbjct: 381 NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVA- 439

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
               H  + K GF    +V NALI+ Y     + DA  VF        D IS+N ++ G 
Sbjct: 440 ----HGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQ--DTISWNSVISGC 493

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           +S G   EA+  F  M         +T +SV+ AC   R    G  VH  ++K+G    T
Sbjct: 494 SSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGET 553

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S++NA + MYS+C        IF  + +K++VSW  MI++Y +  L         EM   
Sbjct: 554 SLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLD 613

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GIRPD F   S L   A    ++  + +H +   NG+   + V+NAL+  Y K   +++A
Sbjct: 614 GIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEA 673

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF  ++ +++I+WNTLI G+  N FP +    FS++L+ + RP+  T++  L + A I
Sbjct: 674 RLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLL-QFRPNAVTMTCILPAAASI 732

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           SSL  G++IH Y L+   +      NA++ +Y KCG L  +  +F+ + +K+ ISW  +I
Sbjct: 733 SSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMI 792

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y  HG GK A++ F+ M+  G I+PD A+F+A+L AC H+GL  +G R F +M  +Y 
Sbjct: 793 AGYGMHGFGKHAIALFEQMRGSG-IEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYK 851

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P   H +C++DLL R G L EA   I S  I+  S  W +L   C  H N++L   +A
Sbjct: 852 IEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVA 911

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             + + E +    YVLL+NIYA A  WE    ++  +   G+ +  G SWI
Sbjct: 912 DKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWI 962



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/655 (26%), Positives = 313/655 (47%), Gaps = 50/655 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G +Q+A+ LF Q+     + PD +++S  L   ++L +   G  +H    + GL   
Sbjct: 180 AKAGDFQEAVSLFRQMQCC-GVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQA 238

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN ++++Y     +    RVF  +   D  SW + +  C   G    A ++F KM  
Sbjct: 239 CAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWS 298

Query: 152 RDLPVYN----AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
           +   + +    +++  C   GY  IG    + +H   V+              +GLL   
Sbjct: 299 QGTEISSVTVLSVLPACAGLGYGLIG----KAVHGYSVK--------------SGLLWGL 340

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDG 265
             + S +  +         + L+ MY  CG++  A +VF+   +KG V  H+ +N++M G
Sbjct: 341 DSVQSGIDDAALG------SKLVFMYVKCGDMASARRVFDAMSSKGNV--HV-WNLIMGG 391

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGFEA 321
            A VG  EE+L  F  M    + P E   +S +  C+    C R G   H   +K GF A
Sbjct: 392 YAKVGEFEESLSLFVQMHELGIAPDEHA-ISCLLKCITCLSCARDGLVAHGYIVKLGFGA 450

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             +V NA I+ Y+    I +A ++F R+  +D +SWN++IS  +   L   AI  ++ M 
Sbjct: 451 QCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMW 510

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           + G   D  T  S+L   A S +     ++H +    G+I    ++NAL+  Y+     +
Sbjct: 511 TQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQ 570

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGF--PVQGLQHFSELLMSELRPDEYTLSVALSS 496
              QIF +M  +N+++W  +I  ++  G    V GL    E+++  +RPD + ++ AL +
Sbjct: 571 STNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGL--LQEMVLDGIRPDVFAVTSALHA 628

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A   SL+ GK +HGY ++N +   + + NA++ +Y KC +++ +  +F+ +  KD ISW
Sbjct: 629 FAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISW 688

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N LI  Y+++    E+ S F  M  + + +P+  T T +L A +    ++ G  I    +
Sbjct: 689 NTLIGGYSRNNFPNESFSLFSDM--LLQFRPNAVTMTCILPAAASISSLERGREIHAYAL 746

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
              GF+      + ++D+  + G L  A RV+  +  +    +W  + +    HG
Sbjct: 747 RR-GFLEDSYASNALVDMYVKCGALLVA-RVLFDRLTKKNLISWTIMIAGYGMHG 799



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 251/548 (45%), Gaps = 36/548 (6%)

Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV---SVVNA-LITMYFNCG 237
           +DVR    S+  V+ +C +   LE  ++ H+L+  S  +      SV+   L+  Y  CG
Sbjct: 95  VDVR----SYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCG 150

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++ +A  VF+       D   +  +M   A  G  +EA+  FR M    + P +   VS 
Sbjct: 151 DLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSP-DAHAVSC 209

Query: 298 MSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           +  C+        G  +H    K G     +V+NA I +YS CG++++A  +F  +  +D
Sbjct: 210 VLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRD 269

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
            +SWN+MI          +A+  + +M S G      T  S+L   A  G+  + + +H 
Sbjct: 270 AISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHG 329

Query: 411 FVFINGI----------ITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
           +   +G+          I +  + + L+  Y K   +  A ++F  MS + N+  WN ++
Sbjct: 330 YSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIM 389

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            G+   G   + L  F ++    + PDE+ +S  L     +S  R G   HGY++K    
Sbjct: 390 GGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFG 449

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           ++ ++ NA+I+ YAK   +  ++ VFN M  +DTISWN++IS  + +G   EA+  F  M
Sbjct: 450 AQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRM 509

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
              G+ + D  T  +VL AC+ +     G R+        G I      + +LD+     
Sbjct: 510 WTQGQ-ELDSVTLLSVLPACAQSRYWFAG-RVVHGYSVKTGLIGETSLANALLDMYSNCS 567

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KPSVYVLL 697
                 ++  S   Q    +W A+ ++    G   L   +AGLL E   D  +P V+ + 
Sbjct: 568 DWQSTNQIFRSMG-QKNVVSWTAMITSYMRAG---LFDKVAGLLQEMVLDGIRPDVFAVT 623

Query: 698 SNIYAAAG 705
           S ++A AG
Sbjct: 624 SALHAFAG 631


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 230/718 (32%), Positives = 374/718 (52%), Gaps = 53/718 (7%)

Query: 26  ISLANLSRSGHYQ-DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           +++ +  R G  + +AL  FV +H   +++    ++S  L  C  + +   G QLH   +
Sbjct: 69  VAIVDYGRRGKGRGEALDHFVDVHRCGRVQG--AAVSRVLKVCGLIPDRVSGEQLHCLCV 126

Query: 85  RAGL-KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           + G  +A   V   ++ +Y                                K G V+   
Sbjct: 127 KCGFDRAEVGVGTALVDMY-------------------------------MKCGGVEDGR 155

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAG 202
            VF+ MP R++  + +++TG  +       + LF  M    V  + ++F SVLS V   G
Sbjct: 156 VVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQG 215

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            ++ GR++H+   K G    V V N+LI MY  CG V +A  VF + +    D +S+N +
Sbjct: 216 AVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETR--DMVSWNTL 273

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           M GL       EAL  F D   +  + S+ T+ +V+  C   +   +  Q+H+  +K GF
Sbjct: 274 MAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGF 333

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +  +V  A +  YS CG++D+A  IF  +   +++VSW  MI    Q      A   + 
Sbjct: 334 HSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFS 393

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQ----VSNALISAYAKN 434
            M+   ++P+EFT+ ++L +S  I ++  IHA +    I TN Q    V  AL+++Y+K 
Sbjct: 394 RMREDNVKPNEFTYSTVLTASIPI-LLPQIHAQI----IKTNYQHAPSVGTALLASYSKL 448

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
              ++A  IF  +  ++++ W+ +++ +   G        F ++ M  ++P+E+T+S A+
Sbjct: 449 GNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAI 508

Query: 495 SSCARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
            +CA  ++ +  G+Q H   +K      + +G+A++T+YA+ G +D +  VF    ++D 
Sbjct: 509 DACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDL 568

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN++IS YAQHG  KEA+  F+ M+ VG I+ D ATF AV+  C+HAGLV +G + FD
Sbjct: 569 VSWNSMISGYAQHGYSKEALDTFRQMETVG-IEMDGATFLAVIVGCTHAGLVKEGQQYFD 627

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           SMV D+   P  +H SCM+DL  RAG LDE   +I      A +  W  L  AC  H N+
Sbjct: 628 SMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNV 687

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LG++ A  LL  E D  + YVLLSNIYAAAG W+E   +R+L+    V K+ GCSWI
Sbjct: 688 ELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWI 745



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 153/555 (27%), Positives = 265/555 (47%), Gaps = 27/555 (4%)

Query: 133 CTKMGHVDYACEVFDKMPDRDLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRR---- 187
           C    +   A +  D MP RD     ++      + G    G G   + H +DV R    
Sbjct: 39  CADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALD-HFVDVHRCGRV 97

Query: 188 DNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFS-CLVSVVNALITMYFNCGNVVDAC 243
              + + VL VC  GL+     G QLH L  K GF    V V  AL+ MY  CG V D  
Sbjct: 98  QGAAVSRVLKVC--GLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGR 155

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
            VFE       + +++  ++ G        + +  F  M    + P+  TF SV+SA   
Sbjct: 156 VVFEGMPKR--NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVAS 213

Query: 304 P---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
                +G +VHAQ++K G  +   V N+ I MYS CG ++EA  +F +++ +D+VSWNT+
Sbjct: 214 QGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTL 273

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGI 417
           ++          A+  + + ++   +  + T+ +   L A+   + +   +H+ V  +G 
Sbjct: 274 MAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGF 333

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFS 476
            ++  V  A++ AY+K   +  A+ IF  M   +N+++W  +I G + N         FS
Sbjct: 334 HSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFS 393

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +    ++P+E+T S  L+  A I  L    QIH  ++K N     S+G A++  Y+K G
Sbjct: 394 RMREDNVKPNEFTYSTVLT--ASIPILL--PQIHAQIIKTNYQHAPSVGTALLASYSKLG 449

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           + + +L +F M+  KD ++W+A++S Y+Q G+   A + F  M   G +KP++ T ++ +
Sbjct: 450 NTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQG-MKPNEFTISSAI 508

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            AC+      D  R F ++   Y +  A    S ++ +  R G +D A R++  +     
Sbjct: 509 DACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIVFERQTDRD 567

Query: 657 SDNWWALFSACAAHG 671
             +W ++ S  A HG
Sbjct: 568 LVSWNSMISGYAQHG 582



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 213/453 (47%), Gaps = 55/453 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
           ++  N  +A L  + H  +AL LF    +S  KL    YS  T +  CANL+  A   QL
Sbjct: 267 MVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYS--TVIKLCANLKQLALARQL 324

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H+  L+ G  +  +V   I+  Y                               +K G +
Sbjct: 325 HSCVLKHGFHSDGNVMTAIMDAY-------------------------------SKCGEL 353

Query: 140 DYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           D A  +F  MP  +++  + AMI GC +N    +   LF  M + +V+ + +++++VL+ 
Sbjct: 354 DDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA 413

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-- 256
               LL    Q+H+ + K+ +    SV  AL+  Y   GN  +A  +F+     + DH  
Sbjct: 414 SIPILLP---QIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFK-----MIDHKD 465

Query: 257 -ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVH 311
            ++++ M+   +  G  + A   F  M +  ++P+E T  S + AC  P  G     Q H
Sbjct: 466 VVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFH 525

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A ++K  ++    V +A +TMY+  G ID A ++F R  ++D+VSWN+MIS YAQ    +
Sbjct: 526 AISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSK 585

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNAL 427
            A+  + +M++VGI  D  TF +++     +G + E  +   + V  + I   ++  + +
Sbjct: 586 EALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCM 645

Query: 428 ISAYAKNERIKQAYQIFHNMS-PRNIITWNTLI 459
           +  Y++  ++ +   +   M  P   + W TL+
Sbjct: 646 VDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL 678


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 366/720 (50%), Gaps = 52/720 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           L+ +L + +R G    AL  F+ +H  H  +    +L   L  C ++ +   G QLH   
Sbjct: 70  LDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLC 129

Query: 84  LRAGL-KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +R G  +    V  +++ +Y     +V  ++VF                           
Sbjct: 130 IRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVF--------------------------- 162

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDA 201
               + MP R++  + +++TG  ++G     + LF  M    V  ++ +FASVLSV    
Sbjct: 163 ----EAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQ 218

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-----DH 256
           G+++ GR++H+   K G    V V N+L+ MY  CG V       EEA+   C     D 
Sbjct: 219 GMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLV-------EEARVVFCGMETRDM 271

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQ 313
           +S+N +M GL   G   EAL  F D   +    ++ T+ +V+  C   +   +  Q+H+ 
Sbjct: 272 VSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSS 331

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRS 372
            +K GF +Y +V  A +  YS  G++  A  IF  +   +++VSW  MI+   Q      
Sbjct: 332 VLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPL 391

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           A   +  M+  G+ P++FT+ ++L +S    +   IHA V          V  AL+++Y+
Sbjct: 392 AAALFSRMREDGVAPNDFTYSTILTAS-VASLPPQIHAQVIKTNYECTSIVGTALLASYS 450

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K    ++A  IF  +  +++++W+ ++  +   G        F ++ M  L+P+E+T+S 
Sbjct: 451 KLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISS 510

Query: 493 ALSSCARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
            + +CA  ++ +  G+Q H   +K+     + + +A++++YA+ G ++ +  +F    ++
Sbjct: 511 VIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDR 570

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SWN+++S YAQHG  ++A+  F+ M+  G I+ D  TF +V+  C+HAGLV++G R 
Sbjct: 571 DLVSWNSMLSGYAQHGYSQKALDVFRQMEAEG-IEMDGVTFLSVIMGCAHAGLVEEGQRY 629

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           FDSM  DYG  P  +H +CM+DL  RAG LDEA  +I      A    W  L  AC  H 
Sbjct: 630 FDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHK 689

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ LG++ A  LL  E    + YVLLSNIY+AAG W+E   +R+L+    V K+ GCSWI
Sbjct: 690 NVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWI 749


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 214/729 (29%), Positives = 363/729 (49%), Gaps = 85/729 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++ L+R+G  Q AL ++ ++ S     P  ++L++ L+AC  L +   G + H
Sbjct: 102 IVSWNTLISALTRNGFEQKALGVYYRM-SREGFVPTHFTLASVLSACGALVDVECGRRCH 160

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             +++ GL    +V N +L +Y   R +    + F ++  P+  S+T             
Sbjct: 161 GISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFT------------- 207

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                             AM+ G  ++   +    LFR M +  +  D+ S +SVL VC 
Sbjct: 208 ------------------AMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCS 249

Query: 201 -AGLLEFG--------------RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
             G  EFG              +Q+H L  K GF   + + N+L+ MY   GN+  A  +
Sbjct: 250 RGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMI 309

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F          +S+NVM+ G     +  +A+   + M      P E+T+V+++ AC+   
Sbjct: 310 FVNMPEVSV--VSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI--- 364

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
                                          G I+    +F  +    + SWNT++S Y+
Sbjct: 365 -----------------------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYS 395

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQ 422
           Q    + A+  + EMQ   + PD  T   +L+S   + ++E    +HA        T+I 
Sbjct: 396 QNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIY 455

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +++ LI  Y+K  +++ A +IF  ++  +I+ WN+++ G  LN    +    F ++    
Sbjct: 456 LASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKG 515

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + P +++ +  LS CA++SSL  G+Q+H  + +   ++   +G+A+I +Y+KCGD+D + 
Sbjct: 516 MFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAAR 575

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF+MM+ K+T++WN +I  YAQ+G G EAV  ++ M   G  KPD  TF AVL+ACSH+
Sbjct: 576 WVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE-KPDGITFVAVLTACSHS 634

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD G +IF+SM  ++G  P  DH +C++D LGRAG L EAE +I+    +     W  
Sbjct: 635 GLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEV 694

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L S+C  + ++ L R  A  L   +    + YVLL+NIY++ G W++A  +REL+    V
Sbjct: 695 LLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQV 754

Query: 723 IKQPGCSWI 731
           +K PG SWI
Sbjct: 755 VKDPGYSWI 763



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 169/608 (27%), Positives = 297/608 (48%), Gaps = 54/608 (8%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           L++ L  C + +    G  +HA+ LR+ L     ++N ++  Y     + + +R+F ++ 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
             D+Y+W   L A  K   ++ A  +F +MP+R++  +N +I+  T NG+E   +G++  
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +      +++ ASVLS C A + +E GR+ H +  K G    + V NAL+ MY  C  
Sbjct: 128 MSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 187

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA + F +      + +S+  MM GLA   +V EA   FR ML   +    ++  SV+
Sbjct: 188 IGDAIQAFGDVP--EPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 245

Query: 299 SAC----------------LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             C                L   V G QVH   +K GFE+   ++N+ + MY+  G +D 
Sbjct: 246 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 305

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A MIF  + E  +VSWN MI+ Y Q++    AI     MQ  G  PDE T+ ++L     
Sbjct: 306 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV---- 361

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
                                       A  K+  I+   Q+F  MS  ++ +WNT+++G
Sbjct: 362 ----------------------------ACIKSGDIEAGRQMFDGMSSPSLSSWNTILSG 393

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  N    + ++ F E+    + PD  TL++ LSS A +  L  G+Q+H    K    + 
Sbjct: 394 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTD 453

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + L + +I +Y+KCG ++ + R+F+ + E D + WN++++  + +   KEA + FK M++
Sbjct: 454 IYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMRE 513

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
            G   P Q ++  VLS C+    +  G ++   +  + G++      S ++D+  + G +
Sbjct: 514 KGMF-PSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYSKCGDV 571

Query: 642 DEAERVIN 649
           D A  V +
Sbjct: 572 DAARWVFD 579


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 209/585 (35%), Positives = 324/585 (55%), Gaps = 16/585 (2%)

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
           ++N +I G +  G    G+ ++ +M ++ VR D+++F  VL  C DA  +  GR++H  V
Sbjct: 9   LWNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG--RV 272
            K GF   V V N L++ Y NCG + DA +VF+E      D +S+N M+ G+ SV     
Sbjct: 68  VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK--DLVSWNTMI-GVFSVNGWHY 124

Query: 273 EEALIRFRDMLVASLRPSELT---FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
            +AL  FR M+   L+P+ +T   F+ V+      + G +VH  +++ G E+   ++N+ 
Sbjct: 125 RDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I MY+  G   EA  +F +L  K++VSWN MI+ +AQ      A+    +MQ  G  P+ 
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNS 244

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            TF ++L   A  G +   + IHA     G   ++ VSNAL   YAK+  +K A  +F +
Sbjct: 245 VTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF-D 303

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
            S R+ +++N LI G        + L  FSE+ +  L+ D  +   ALS+CA +++++ G
Sbjct: 304 TSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQG 363

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IHG++L+      + + N+++  Y KCG +  +  +F+ M  KD  SWN +I  Y   
Sbjct: 364 KEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGML 423

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           GE   A+  F+ M+    ++ D  +F AVLSACSH GL++ G + FD +    G  P + 
Sbjct: 424 GELDTAIDLFENMRK-DDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQM 481

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +CM+DLLGRAG ++EA  +I    I   ++ W AL  AC  +GNL L    A  L E 
Sbjct: 482 HYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFEL 541

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +    Y LLSN+YA  G W+EA  IREL+K  GV K PGCSW+
Sbjct: 542 KPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWV 586



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 262/578 (45%), Gaps = 57/578 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++PD ++    L ACA+      G ++H   ++ G ++   V NT+LS Y N   L    
Sbjct: 37  VRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAG 96

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG--YE 170
           RV                               FD+MP++DL  +N MI   + NG  Y 
Sbjct: 97  RV-------------------------------FDEMPEKDLVSWNTMIGVFSVNGWHYR 125

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           D  + +FR M    ++ ++ + +S L V  +    + GR++H    + G    + + N+L
Sbjct: 126 D-ALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSL 184

Query: 230 ITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRF-RDMLVAS 286
           I MY   G+  +A  VF   +AK  V    S+N M+   A   R E   +   R M    
Sbjct: 185 IDMYAKSGHSTEASNVFYKLDAKNVV----SWNAMIANFAQ-NRFELVAVGLVRQMQDYG 239

Query: 287 LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
             P+ +TF +V+ AC      R G ++HA+++  G      VSNA   MY+  G +  A 
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLAR 299

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGF- 401
            +F     +D VS+N +I  ++Q +    ++  + EMQ +G++ D  +F G+L A +   
Sbjct: 300 NVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLT 358

Query: 402 -IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            I+  + IH F+       ++ V+N+L+  Y K  RI  A  IF  M+ +++ +WNT+I 
Sbjct: 359 AIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMIL 418

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+ + G     +  F  +   ++  D  +    LS+C+    L  G++     LK   I 
Sbjct: 419 GYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDE-LKARGIE 477

Query: 521 KMSLGNA-MITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
              +  A M+ L  + G ++ +  +   + I  D   W AL+ A   +G  + A     A
Sbjct: 478 PTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAW---A 534

Query: 579 MQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
            + +  +KP+ + +  +LS   +  G  D+  RI + M
Sbjct: 535 AEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELM 572



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 185/383 (48%), Gaps = 40/383 (10%)

Query: 21  LLKLNISLANLSRSG-HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  +   S +G HY+DAL +F ++     LKP+  ++S+ L     L     G ++
Sbjct: 107 LVSWNTMIGVFSVNGWHYRDALDMF-RLMIDEGLKPNSITISSFLPVLVELEFFKAGREV 165

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H  ++R GL++   +AN+++ +Y                                K GH 
Sbjct: 166 HGSSIRMGLESDIFIANSLIDMY-------------------------------AKSGHS 194

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
             A  VF K+  +++  +NAMI    +N +E + +GL R+M       ++ +F +VL  C
Sbjct: 195 TEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPAC 254

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
              GL+  G+++H+     G +  + V NAL  MY   G++  A  VF+ +   + D +S
Sbjct: 255 ARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTS---LRDEVS 311

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           YN+++ G +      E+L  F +M +  L+   ++F+  +SAC      + G ++H   +
Sbjct: 312 YNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLL 371

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +  F  +  V+N+ +  Y+ CG+I  A  IF R+  KD+ SWNTMI  Y       +AI 
Sbjct: 372 RKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAID 431

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS 398
            +  M+   +  D  +F ++L++
Sbjct: 432 LFENMRKDDVEYDSVSFIAVLSA 454



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 38/314 (12%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +TS    +  NI +   S++    ++L LF ++     LK D  S    L+ACANL    
Sbjct: 303 DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLM-GLKQDNVSFMGALSACANLTAIK 361

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H + LR     +  VAN++L  Y     +   + +F  + N DV SW T +    
Sbjct: 362 QGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYG 421

Query: 135 KMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
            +G +D A ++F+ M   D+      + A+++ C+  G  + G   F E+    +     
Sbjct: 422 MLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQM 481

Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-- 247
            +A ++ +   AGL+E   +L           L  V +A I      G ++ AC+++   
Sbjct: 482 HYACMVDLLGRAGLMEEAAEL--------IKGLPIVPDANI-----WGALLGACRIYGNL 528

Query: 248 EAKGYVCDHI---------SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           E   +  +H+          Y ++ +  A  GR +EA  R R+++ +         V   
Sbjct: 529 ELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEA-NRIRELMKSR-------GVKKS 580

Query: 299 SACLCPRVGYQVHA 312
             C   ++G Q HA
Sbjct: 581 PGCSWVQIGEQAHA 594


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 210/668 (31%), Positives = 345/668 (51%), Gaps = 42/668 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           +A FG QLHA A+  GL     VAN ++++Y                             
Sbjct: 115 DAGFGTQLHALAMATGLGGDIFVANALVAMYGG--------------------------- 147

Query: 132 ACTKMGHVDYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
                G VD A  VFD+   +R+   +N +++   +N      + +F EM    V+ + +
Sbjct: 148 ----FGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEF 203

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     LE GR++H++V ++G+   V   NAL+ MY   G++  A  VF   
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVF--G 261

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
           K    D +S+N  + G    G  + AL     M  + L P+  T  S++ AC       +
Sbjct: 262 KVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNL 321

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K+  ++   ++   + MY+  G +D+A  +F  + ++D+V WN +IS  + 
Sbjct: 322 GRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSH 381

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQV 423
                 A+  +  M+  G   +  T  ++L S+  +E +     +HA     G +++  V
Sbjct: 382 GAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHV 441

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI +Y K + +  AY++F      +II + ++I            ++ F E+L   L
Sbjct: 442 VNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGL 501

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD + LS  L++CA +S+   GKQ+H +++K   +S +  GNA++  YAKCG ++ +  
Sbjct: 502 DPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADL 561

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F+ + EK  +SW+A+I   AQHG GK A+  F  M D   I P+  T T+VL AC+HAG
Sbjct: 562 AFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD-EHISPNHITMTSVLCACNHAG 620

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+  R F+SM   +G    E+H +CM+DLLGRAG LD+A  ++NS   Q  +  W AL
Sbjct: 621 LVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGAL 680

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
            +A   H +  LGR+ A  L   E +K   +VLL+N YA+AG+W++ A +R+L+K + V 
Sbjct: 681 LAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVK 740

Query: 724 KQPGCSWI 731
           K+P  SW+
Sbjct: 741 KEPAMSWV 748



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 154/549 (28%), Positives = 257/549 (46%), Gaps = 45/549 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +HA+ L++GL A     N +LS Y   R   S +RVF EI                 
Sbjct: 23  GAHIHAHLLKSGLFAV--FRNHLLSFYSKCRLPGSARRVFDEI----------------- 63

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                         PD     +++++T  + N      +G FR M    VR + +    V
Sbjct: 64  --------------PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVV 109

Query: 196 LSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L    DAG   FG QLH+L   +G    + V NAL+ MY   G V +A  VF+EA G   
Sbjct: 110 LKCAPDAG---FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEA-GCER 165

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           + +S+N +M       R   A+  F +M+   ++P+E  F  V++AC   R    G +VH
Sbjct: 166 NTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVH 225

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  +++G++     +NA + MYS  G I  A ++F ++ E D+VSWN  IS        +
Sbjct: 226 AMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQ 285

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+   L+M+S G+ P+ FT  S+L   A SG   +   IH F+      ++  ++  L+
Sbjct: 286 HALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLV 345

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK+  +  A ++F  +  R+++ WN LI+G        + L  F  +       +  
Sbjct: 346 DMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRT 405

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL+  L S A + ++   +Q+H    K   +S   + N +I  Y KC  L+ + RVF   
Sbjct: 406 TLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKH 465

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D I++ ++I+A +Q   G++A+  F  M   G + PD    +++L+AC+     + G
Sbjct: 466 GSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-LDPDPFVLSSLLNACASLSAYEQG 524

Query: 609 TRIFDSMVN 617
            ++   ++ 
Sbjct: 525 KQVHAHLIK 533



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 253/522 (48%), Gaps = 19/522 (3%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +H+ + KSG   +    N L++ Y  C     A +VF+E       H+S++ ++   
Sbjct: 23  GAHIHAHLLKSGLFAVFR--NHLLSFYSKCRLPGSARRVFDEIPDPC--HVSWSSLVTAY 78

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
           ++     +AL  FR M   S+R +E     V+        G Q+HA AM +G      V+
Sbjct: 79  SNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQLHALAMATGLGGDIFVA 138

Query: 327 NAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           NA + MY   G +DEA M+F     E++ VSWN ++S Y + +    A+  + EM   G+
Sbjct: 139 NALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGEMVWGGV 198

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P+EF F  ++     S  +E    +HA V   G   ++  +NAL+  Y+K   I+ A  
Sbjct: 199 QPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAV 258

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +   ++++WN  I+G +L+G     L+   ++  S L P+ +TLS  L +CA   +
Sbjct: 259 VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGA 318

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+QIHG+++K N  S   +   ++ +YAK G LD + +VF+ + ++D + WNALIS 
Sbjct: 319 FNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISG 378

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
            +   +  EA+S F  M+  G    ++ T  AVL + +    + D TR   ++    GF+
Sbjct: 379 CSHGAQHAEALSLFCRMRKEG-FDVNRTTLAAVLKSTASLEAISD-TRQVHALAEKLGFL 436

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
                ++ ++D   +   L+ A RV         S +  A  S   A      G     L
Sbjct: 437 SDSHVVNGLIDSYWKCDCLNYAYRVFEKH----GSYDIIAFTSMITALSQCDHGEDAIKL 492

Query: 683 LLE--REQDKPSVYVLLSNIYAAAGL--WEEAANIR-ELLKR 719
            +E  R+   P  +VL S + A A L  +E+   +   L+KR
Sbjct: 493 FMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 226/523 (43%), Gaps = 42/523 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+ +  S  + AC   R+   G ++HA  +R G       AN ++ +Y    D+    
Sbjct: 198 VQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAA 257

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF ++   DV SW  F+S C   GH  +A E+  +M    L V N              
Sbjct: 258 VVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL-VPNV------------- 303

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
                            ++ +S+L  C  +G    GRQ+H  + K+       +   L+ 
Sbjct: 304 -----------------FTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVD 346

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G + DA KVF+       D + +N ++ G +   +  EAL  F  M       + 
Sbjct: 347 MYAKHGLLDDAKKVFDWIPQR--DLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNR 404

Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            T  +V+ +           QVHA A K GF + + V N  I  Y  C  ++ A  +F +
Sbjct: 405 TTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
               DI+++ +MI+  +Q + G  AI  ++EM   G+ PD F   SLL   AS    E  
Sbjct: 465 HGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQG 524

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +HA +     ++++   NAL+  YAK   I+ A   F  +  + +++W+ +I G   +
Sbjct: 525 KQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQH 584

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   + L  F  ++   + P+  T++  L +C     +   K+    + +   I +    
Sbjct: 585 GHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEH 644

Query: 526 NA-MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQH 566
            A MI L  + G LD ++ + N M  + +   W AL++A   H
Sbjct: 645 YACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 207/471 (43%), Gaps = 45/471 (9%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           GH Q AL L +Q+ SS  L P++++LS+ L ACA       G Q+H + ++A   +  ++
Sbjct: 282 GHDQHALELLLQMKSS-GLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYI 340

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           A  ++ +Y     L   K+VF  I   D+  W                            
Sbjct: 341 AFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLW---------------------------- 372

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSL 213
              NA+I+GC+        + LF  M K     +  + A+VL S      +   RQ+H+L
Sbjct: 373 ---NALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHAL 429

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             K GF     VVN LI  Y+ C  +  A +VFE+   Y  D I++  M+  L+     E
Sbjct: 430 AEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSY--DIIAFTSMITALSQCDHGE 487

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           +A+  F +ML   L P      S+++AC        G QVHA  +K  F +     NA +
Sbjct: 488 DAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALV 547

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
             Y+ CG I++A + F+ L EK +VSW+ MI   AQ   G+ A+  +  M    I P+  
Sbjct: 548 YTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHI 607

Query: 391 TFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           T  S+L +     +V+      ++   + GI    +    +I    +  ++  A ++ ++
Sbjct: 608 TMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNS 667

Query: 447 MS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           M    N   W  L+    ++  P  G     +L +  L P++    V L++
Sbjct: 668 MPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFI--LEPEKSGTHVLLAN 716


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 214/694 (30%), Positives = 364/694 (52%), Gaps = 48/694 (6%)

Query: 53  LKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++P D  + S+ L +C   R+   G  +HA  +   ++    + N+++SLY  + D    
Sbjct: 57  IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + VF                            E   +   RD+  ++AM+     NG E 
Sbjct: 117 EDVF----------------------------ETMRRFGKRDVVSWSAMMACYGNNGREL 148

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNAL 229
             I +F E  +L +  ++Y + +V+  C ++  +  GR     + K+G F   V V  +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208

Query: 230 ITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           I M+    N  + A KVF++      + +++ +M+     +G   EA+  F DM+++   
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEA 342
             + T  SV SAC       +G Q+H+ A++SG      V  + + MY+ C   G +D+ 
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDC 324

Query: 343 CMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG 400
             +F R+++  ++SW  +I+ Y +  NL   AI  + EM + G + P+ FTF S   + G
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 401 FI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            +    + + +    F  G+ +N  V+N++IS + K++R++ A + F ++S +N++++NT
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
            ++G   N    Q  +  SE+   EL    +T +  LS  A + S+R G+QIH  V+K  
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L     + NA+I++Y+KCG +D + RVFN M  ++ ISW ++I+ +A+HG     +  F 
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M + G +KP++ T+ A+LSACSH GLV +G R F+SM  D+   P  +H +CM+DLL R
Sbjct: 565 QMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
           AG L +A   IN+   QA    W     AC  H N  LG++ A  +LE + ++P+ Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNIYA AG WEE+  +R  +K   ++K+ GCSWI
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/473 (24%), Positives = 219/473 (46%), Gaps = 46/473 (9%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++A+  F+ +  S   + D ++LS+  +ACA L N + G QLH++A+R+GL     V
Sbjct: 248 GFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDV 304

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
             +++ +Y                            + C+  G VD   +VFD+M D  +
Sbjct: 305 ECSLVDMY----------------------------AKCSADGSVDDCRKVFDRMEDHSV 336

Query: 155 PVYNAMITGCTEN-GYEDIGIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
             + A+ITG  +N       I LF EM  +  V  ++++F+S    C +      G+Q+ 
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K G +   SV N++I+M+     + DA + FE       + +SYN  +DG      
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK--NLVSYNTFLDGTCRNLN 454

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
            E+A     ++    L  S  TF S++S        R G Q+H+Q +K G      V NA
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I+MYS CG ID A  +F  ++ ++++SW +MI+ +A+       +  + +M   G++P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574

Query: 389 EFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           E T+ ++L++   + +V       ++    + I   ++    ++    +   +  A++  
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634

Query: 445 HNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           + M  + +++ W T +    ++     G     ++L  EL P+E    + LS+
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKIL--ELDPNEPAAYIQLSN 685


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 206/618 (33%), Positives = 315/618 (50%), Gaps = 75/618 (12%)

Query: 188 DNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D+  FA +L  C      F  R +H+ + K+ FS  + + N L+ +Y  CG + DA KVF
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 247 EEAKG-------------------------YVC----DHISYNVMMDGLASVGRVEEALI 277
           +  +                          + C    D  S+N M+ G A   R EEAL 
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
              DM       +E +F S +SAC   +   +G Q+H    KS +     + +A + MYS
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYS 197

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C  +  A   F  +  ++IVSWN++I+ Y Q      A+  ++ M + GI PDE T  S
Sbjct: 198 KCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLAS 257

Query: 395 LLASSGFIEMVE---MIHA--------------------------------FVFINGIIT 419
           + ++   +  +     IHA                                 VF    + 
Sbjct: 258 VASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR 317

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++    +++S YAK   +K A  +F NM  RN+++WN LI G+  NG   + ++ F  L 
Sbjct: 318 DVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLK 377

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYA 533
              + P  YT    L++CA ++ L+ G+Q H ++LK+         S + +GN++I +Y 
Sbjct: 378 RESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYM 437

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG ++    VF  M+E+D +SWNA+I  YAQ+G G EA+  F+ M   G  +PD  T  
Sbjct: 438 KCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGE-RPDHVTMI 496

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            VLSACSHAGLV++G   F SM  ++G +P +DH +CM+DLLGRAG LDEA  +I +  +
Sbjct: 497 GVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPM 556

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W +L +AC  HGN+ LG+ +A  LLE +      YVLLSN+YA  G W++   +
Sbjct: 557 EPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRV 616

Query: 714 RELLKRTGVIKQPGCSWI 731
           R+ +++ GVIKQPGCSWI
Sbjct: 617 RKQMRQMGVIKQPGCSWI 634



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 264/560 (47%), Gaps = 51/560 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D    +  L  C   ++      +HA  ++    +   + N ++ +Y     L   ++VF
Sbjct: 18  DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             +Q  + +SW   L A TK G +D A  +F  MP+RD   +NAM++G  +    +  + 
Sbjct: 78  DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALR 137

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMY 233
              +MH  D   + YSF S LS C AGL++   G Q+H L+ KS +S  V + +AL+ MY
Sbjct: 138 FVVDMHSEDFVLNEYSFGSALSAC-AGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C  V  A + F++    V + +S+N ++      G   +AL  F  M+   + P E+T
Sbjct: 197 SKCRVVASAQRAFDDMD--VRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEIT 254

Query: 294 FVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFAR- 348
             SV SAC      R G Q+HA+ MK   +     + NA + MY+ C +++EA ++F R 
Sbjct: 255 LASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 349 ------------------------------LQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                                         + E+++VSWN +I+ Y Q      A+  +L
Sbjct: 315 PLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE---------MIHAFVFINGIITNIQVSNALIS 429
            ++   I P  +TFG+LL +   +  ++         + H F F +G  ++I V N+LI 
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLID 434

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   ++    +F  M  R+ ++WN +I G+  NG+  + L+ F E+L+S  RPD  T
Sbjct: 435 MYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVT 494

Query: 490 LSVALSSCARISSLRHGK-QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           +   LS+C+    +  G+       +++ L+        M+ L  + G LD +  +   M
Sbjct: 495 MIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554

Query: 549 -IEKDTISWNALISAYAQHG 567
            +E D + W +L++A   HG
Sbjct: 555 PMEPDAVVWGSLLAACKVHG 574



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/372 (28%), Positives = 177/372 (47%), Gaps = 19/372 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
            ++G    AL +FV++ +   ++PD  +L++  +ACA+L     G Q+HA  ++      
Sbjct: 228 EQNGPAGKALEVFVRMMNC-GIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRN 286

Query: 92  PHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             V  N ++ +Y   R +   + VF  +   DV S T+ +S   K   V  A  +F  M 
Sbjct: 287 DLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMM 346

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           +R++  +NA+I G T+NG  +  + LF  + +  +   +Y+F ++L+ C +   L+ GRQ
Sbjct: 347 ERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406

Query: 210 LHSLVTKSGF------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            H+ + K GF         + V N+LI MY  CG V D   VFE  +    D++S+N M+
Sbjct: 407 AHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFE--RMLERDNVSWNAMI 464

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGF 319
            G A  G   EAL  FR+MLV+  RP  +T + V+SAC    L         +  ++ G 
Sbjct: 465 VGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGL 524

Query: 320 EAYTSVSNAAITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMIS---TYAQRNLGRSAIL 375
                     + +    G +DEA  +I     E D V W ++++    +    LG+    
Sbjct: 525 VPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAE 584

Query: 376 AYLEMQSVGIRP 387
             LE+  +   P
Sbjct: 585 RLLEIDPLNSGP 596



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 184/422 (43%), Gaps = 72/422 (17%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  ++   +++AL   V +HS   +  + YS  + L+ACA L + + G Q+H    
Sbjct: 120 NAMVSGFAQRDRFEEALRFVVDMHSEDFVLNE-YSFGSALSACAGLMDLSIGVQIHGLIA 178

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++      ++ + ++ +Y   R + S +R F ++   ++ SW + ++   + G    A E
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALE 238

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VF +M          M  G                     +  D  + ASV S C +   
Sbjct: 239 VFVRM----------MNCG---------------------IEPDEITLASVASACASLSA 267

Query: 204 LEFGRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEE------------AK 250
           +  G Q+H+ V K   +   + + NAL+ MY  C  V +A  VF+               
Sbjct: 268 IREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVS 327

Query: 251 GYVC-----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           GY                   + +S+N ++ G    G  EEA+  F  +   S+ P+  T
Sbjct: 328 GYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387

Query: 294 FVSVMSACLC---PRVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDEACM 344
           F ++++AC      ++G Q H   +K GF      ++   V N+ I MY  CG +++  +
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F R+ E+D VSWN MI  YAQ   G  A+  + EM   G RPD  T   +L++     +
Sbjct: 448 VFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGL 507

Query: 405 VE 406
           VE
Sbjct: 508 VE 509


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 219/722 (30%), Positives = 367/722 (50%), Gaps = 45/722 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  ++   R+  Y +A+H F+++ S  + +PD ++    + AC    +   G  +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ GL     V N +++LY                                K G +D
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALY-------------------------------GKCGFLD 262

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFASVLSV 198
            A E+FDKMP+++L  +N++I G +ENG+       FR + +    +  D  +  ++L V
Sbjct: 263 EAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPV 322

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C   G ++ G  +H +  K G    + V NALI MY  CG + +A  +F + +      +
Sbjct: 323 CSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV--V 380

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACLCPRVGYQV---HA 312
           S+N M+   +  G V E     R M +    +  +E+T ++++ ACL       +   H 
Sbjct: 381 SWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHG 440

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            +++  F+    ++NA I  Y+ CG +  A  +F  +  K + SWN +I  +AQ      
Sbjct: 441 YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A+  Y EM  +GI PD+F+  SLL + G + +++    IH FV  NG+  N  V+ +L+S
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y    +       F  M  +N + WN +++G+  N  P + L  F ++L   L PDE  
Sbjct: 561 LYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  L +C+++S+L  GK++H + LKN+L+    +  +++ +YAK G L  S R+FN + 
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            K+  SWN +I+ +  HG+G +AV  F+ M+   + +PD+ TF  VL AC HAGLV +G 
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDK-QPDRFTFLGVLQACCHAGLVSEGL 739

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
                M   Y   P  +H +C++D+LGRAG L+EA   IN    +  +  W +L S+   
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSIT 799

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + +L +G   A  LL  E +K   Y+LLSN+YA AG W+    +R+ +K   + K  GCS
Sbjct: 800 YVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCS 859

Query: 730 WI 731
           WI
Sbjct: 860 WI 861



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 299/592 (50%), Gaps = 40/592 (6%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGL 203
           VFD++ +++L  +NA+++G   N   D  I  F E+  + + + DN++F  ++  C    
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  G+ +H +  K G    + V NA+I +Y  CG + +A ++F++      + IS+N +
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ--NLISWNSL 282

Query: 263 MDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS 317
           + G +  G   EA   FR +L +   L P   T V+++  C       VG  +H  A+K 
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKL 342

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA--IL 375
           G      V NA I MYS CG + EA ++F +++ K +VSWN+MI  Y++         +L
Sbjct: 343 GLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLL 402

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISA 430
             + M+   +  +E T  +LL +   +E  E+     +H +   +       ++NA I+A
Sbjct: 403 RKMWMEEELMEVNEVTILNLLPAC--LEESELLSLRALHGYSLRHSFQYKELINNAFIAA 460

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   +  A  +F  M+ +++ +WN +I G   NG P++ L  + E+    + PD++++
Sbjct: 461 YAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSI 520

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              L +C R+  L++GK+IHG+VL+N L     +  ++++LY  C         F  M +
Sbjct: 521 VSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGD 580

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K+++ WNA++S Y+Q+    EA+S F+ M   G ++PD+    ++L ACS    +  G  
Sbjct: 581 KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG-LEPDEIAIASILGACSQLSALGLGKE 639

Query: 611 IF-----DSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           +      +S++ D       + ++C ++D+  ++G+L  ++R+ N  + +  + +W  + 
Sbjct: 640 VHCFALKNSLMED-------NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVA-SWNVMI 691

Query: 665 SACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIYAA--AGLWEEAAN 712
           +    HG    G     L   ++R   +P  +  L  + A   AGL  E  N
Sbjct: 692 TGFGVHGQ---GNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 209/420 (49%), Gaps = 15/420 (3%)

Query: 204 LEFGRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +E GR+L   L   S FS    +   LITMY  CG  +++  VF+       +   +N +
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK--NLFQWNAL 180

Query: 263 MDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           + G       +EA+  F +++ V   +P   TF  ++ AC       +G  VH  A+K G
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V NA I +Y  CG +DEA  +F ++ E++++SWN++I  +++      A  A+ 
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300

Query: 379 EM--QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
            +     G+ PD  T  +LL   +  G +++  +IH      G++  + V NALI  Y+K
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLS 491
              + +A  +F  +  +++++WN++I  +   GF  +      ++ M E  +  +E T+ 
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +C   S L   + +HGY L+++   K  + NA I  YAKCG L  +  VF  M  K
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              SWNA+I  +AQ+G+  +A+  +  M  +G I PD  +  ++L AC   GL+  G  I
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG-ILPDDFSIVSLLLACGRLGLLQYGKEI 539



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRP 485
           LI+ Y+      ++  +F  +  +N+  WN L++G++ N    + +  F EL+ ++E +P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D +T    + +C     +  GK +HG  +K  LI  + +GNAMI LY KCG LD ++ +F
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR-IKPDQATFTAVLSACSHAGL 604
           + M E++ ISWN+LI  ++++G   EA   F+++ + G  + PD AT   +L  CS  G 
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           VD G  +   M    G +      + ++D+  + G L EA
Sbjct: 329 VDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 219/722 (30%), Positives = 367/722 (50%), Gaps = 45/722 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  ++   R+  Y +A+H F+++ S  + +PD ++    + AC    +   G  +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ GL     V N +++LY                                K G +D
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALY-------------------------------GKCGFLD 262

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFASVLSV 198
            A E+FDKMP+++L  +N++I G +ENG+       FR + +    +  D  +  ++L V
Sbjct: 263 EAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPV 322

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C   G ++ G  +H +  K G    + V NALI MY  CG + +A  +F + +      +
Sbjct: 323 CSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSV--V 380

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACLCPRVGYQV---HA 312
           S+N M+   +  G V E     R M +    +  +E+T ++++ ACL       +   H 
Sbjct: 381 SWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHG 440

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            +++  F+    ++NA I  Y+ CG +  A  +F  +  K + SWN +I  +AQ      
Sbjct: 441 YSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK 500

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A+  Y EM  +GI PD+F+  SLL + G + +++    IH FV  NG+  N  V+ +L+S
Sbjct: 501 ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLS 560

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y    +       F  M  +N + WN +++G+  N  P + L  F ++L   L PDE  
Sbjct: 561 LYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIA 620

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  L +C+++S+L  GK++H + LKN+L+    +  +++ +YAK G L  S R+FN + 
Sbjct: 621 IASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN 680

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            K+  SWN +I+ +  HG+G +AV  F+ M+   + +PD+ TF  VL AC HAGLV +G 
Sbjct: 681 GKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDK-QPDRFTFLGVLQACCHAGLVSEGL 739

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
                M   Y   P  +H +C++D+LGRAG L+EA   IN    +  +  W +L S+   
Sbjct: 740 NYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSIT 799

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + +L +G   A  LL  E +K   Y+LLSN+YA AG W+    +R+ +K   + K  GCS
Sbjct: 800 YVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCS 859

Query: 730 WI 731
           WI
Sbjct: 860 WI 861



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/592 (27%), Positives = 299/592 (50%), Gaps = 40/592 (6%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGL 203
           VFD++ +++L  +NA+++G   N   D  I  F E+  + + + DN++F  ++  C    
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  G+ +H +  K G    + V NA+I +Y  CG + +A ++F++      + IS+N +
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQ--NLISWNSL 282

Query: 263 MDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS 317
           + G +  G   EA   FR +L +   L P   T V+++  C       VG  +H  A+K 
Sbjct: 283 IRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKL 342

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA--IL 375
           G      V NA I MYS CG + EA ++F +++ K +VSWN+MI  Y++         +L
Sbjct: 343 GLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLL 402

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISA 430
             + M+   +  +E T  +LL +   +E  E+     +H +   +       ++NA I+A
Sbjct: 403 RKMWMEEELMEVNEVTILNLLPAC--LEESELLSLRALHGYSLRHSFQYKELINNAFIAA 460

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   +  A  +F  M+ +++ +WN +I G   NG P++ L  + E+    + PD++++
Sbjct: 461 YAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSI 520

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              L +C R+  L++GK+IHG+VL+N L     +  ++++LY  C         F  M +
Sbjct: 521 VSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGD 580

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K+++ WNA++S Y+Q+    EA+S F+ M   G ++PD+    ++L ACS    +  G  
Sbjct: 581 KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDG-LEPDEIAIASILGACSQLSALGLGKE 639

Query: 611 IF-----DSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           +      +S++ D       + ++C ++D+  ++G+L  ++R+ N  + +  + +W  + 
Sbjct: 640 VHCFALKNSLMED-------NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVA-SWNVMI 691

Query: 665 SACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIYAA--AGLWEEAAN 712
           +    HG    G     L   ++R   +P  +  L  + A   AGL  E  N
Sbjct: 692 TGFGVHGQ---GNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLN 740



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 209/420 (49%), Gaps = 15/420 (3%)

Query: 204 LEFGRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +E GR+L   L   S FS    +   LITMY  CG  +++  VF+       +   +N +
Sbjct: 123 VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK--NLFQWNAL 180

Query: 263 MDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           + G       +EA+  F +++ V   +P   TF  ++ AC       +G  VH  A+K G
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V NA I +Y  CG +DEA  +F ++ E++++SWN++I  +++      A  A+ 
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300

Query: 379 EM--QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
            +     G+ PD  T  +LL   +  G +++  +IH      G++  + V NALI  Y+K
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLS 491
              + +A  +F  +  +++++WN++I  +   GF  +      ++ M E  +  +E T+ 
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +C   S L   + +HGY L+++   K  + NA I  YAKCG L  +  VF  M  K
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              SWNA+I  +AQ+G+  +A+  +  M  +G I PD  +  ++L AC   GL+  G  I
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLG-ILPDDFSIVSLLLACGRLGLLQYGKEI 539



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 3/220 (1%)

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRP 485
           LI+ Y+      ++  +F  +  +N+  WN L++G++ N    + +  F EL+ ++E +P
Sbjct: 149 LITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQP 208

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D +T    + +C     +  GK +HG  +K  LI  + +GNAMI LY KCG LD ++ +F
Sbjct: 209 DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELF 268

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR-IKPDQATFTAVLSACSHAGL 604
           + M E++ ISWN+LI  ++++G   EA   F+++ + G  + PD AT   +L  CS  G 
Sbjct: 269 DKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGN 328

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           VD G  +   M    G +      + ++D+  + G L EA
Sbjct: 329 VDVGM-VIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEA 367


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 197/545 (36%), Positives = 296/545 (54%), Gaps = 45/545 (8%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-L 287
            I +Y N G++  A  +F++      D  ++ +++  L   GR  EA+  + D    + +
Sbjct: 17  FIKVYSNSGDLQRARHLFDKIPQP--DLPTWTILISALTKHGRSLEAIQYYNDFRHKNCV 74

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P +L  +SV  AC   R      +VH  A++ GF +   + NA I MY  C   + A +
Sbjct: 75  EPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARL 134

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F  +  +D++SW +M S Y    L R A+ A+ +M   G RP+  T  S+L +   ++ 
Sbjct: 135 VFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKD 194

Query: 405 VEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           ++    +H FV  NG+  N+ VS+AL++ YA    I+QA  +F +MS R+ ++WN LI  
Sbjct: 195 LKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITA 254

Query: 462 FLLNGFPVQGLQHFSELLM-----------------------------------SELRPD 486
           + LN    +GL  F  ++                                    S  +P+
Sbjct: 255 YFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPN 314

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           + T++  L +C  + SLR GKQIHGY+ ++     ++   A++ +YAKCGDL+ S RVF+
Sbjct: 315 QITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFS 374

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           MM ++DT+SWN +I A + HG G+EA+  F+ M D G ++P+  TFT VLS CSH+ LVD
Sbjct: 375 MMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSG-VRPNSVTFTGVLSGCSHSRLVD 433

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G  IFDSM  D+   P  DH SCM+D+L RAG L+EA   I    I+  +  W AL   
Sbjct: 434 EGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  + N+ LGRI A  L E E D P  YVLLSNI  +A LW EA+  R+L++  GV K P
Sbjct: 494 CRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNP 553

Query: 727 GCSWI 731
           GCSWI
Sbjct: 554 GCSWI 558



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 226/516 (43%), Gaps = 78/516 (15%)

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           PH+A   + +Y N+ DL   + +F +I  PD+ +WT  +SA TK G    A + ++    
Sbjct: 11  PHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYND--- 67

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQ 209
                                    FR  HK  V  D     SV   C A L +    ++
Sbjct: 68  -------------------------FR--HKNCVEPDKLLLLSVAKAC-ASLRDVMNAKR 99

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H    + GF   V + NALI MY  C     A  VFE       D IS+  M     + 
Sbjct: 100 VHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMP--FRDVISWTSMASCYVNC 157

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
           G + EAL  FR M +   RP+ +T  S++ AC      + G +VH   +++G      VS
Sbjct: 158 GLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS 217

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY---------------------- 364
           +A + MY+SC  I +A ++F  +  +D VSWN +I+ Y                      
Sbjct: 218 SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVG 277

Query: 365 -------------AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMI 408
                         Q      A+     MQ+ G +P++ T  S+L +   +E +   + I
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQI 337

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H ++F +    ++  + AL+  YAK   ++ + ++F  M+ R+ ++WNT+I    ++G  
Sbjct: 338 HGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA- 527
            + L  F E++ S +RP+  T +  LS C+    +  G  I   + +++ +   +  ++ 
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457

Query: 528 MITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
           M+ + ++ G L+ +   +  M IE    +W AL+  
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/478 (22%), Positives = 203/478 (42%), Gaps = 73/478 (15%)

Query: 26  ISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           I ++ L++ G   +A+  +      + ++PD   L +   ACA+LR+     ++H  A+R
Sbjct: 47  ILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIR 106

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
            G  +   + N ++ +Y   R     + VF  +   DV SWT+  S     G +  A   
Sbjct: 107 FGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREA--- 163

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
                                       +G FR+M     R ++ + +S+L  C D   L
Sbjct: 164 ----------------------------LGAFRKMGLNGERPNSVTVSSILPACTDLKDL 195

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE---------------- 248
           + GR++H  V ++G    V V +AL+ MY +C ++  A  VF+                 
Sbjct: 196 KSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAY 255

Query: 249 -----------------AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
                            ++G   ++ S+N ++ G    GR E+AL     M  +  +P++
Sbjct: 256 FLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQ 315

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T  SV+ AC      R G Q+H    +  F    + + A + MY+ CG ++ +  +F+ 
Sbjct: 316 ITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSM 375

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
           + ++D VSWNTMI   +    G  A+L + EM   G+RP+  TF  +L+      +V+  
Sbjct: 376 MTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435

Query: 407 --MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII-TWNTLING 461
             +  +    + +  +    + ++   ++  R+++AY+    M        W  L+ G
Sbjct: 436 LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGG 493


>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 219/698 (31%), Positives = 359/698 (51%), Gaps = 60/698 (8%)

Query: 46  QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNA 105
           Q+HS   +  D  +++ +L AC     +  G Q+H +A+ +G  ++  V+N+++ +Y  +
Sbjct: 70  QLHSLENV--DEVTVALSLKACQG--ESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKS 125

Query: 106 RDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCT 165
            +      VF  + +PD+ SW T LS              F++  D              
Sbjct: 126 GNFGKALIVFENLSHPDIVSWNTVLSG-------------FEESVD-------------- 158

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLV 223
                   +   R MH   +  D  ++ S L+ C  D G L FG QLHSLV K G  C V
Sbjct: 159 -------ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFL-FGWQLHSLVVKCGLGCEV 210

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE--EALIRFRD 281
            + NAL+TMY   G + +A +VF+E      D +S+N M+ G A  G+    EA++ F +
Sbjct: 211 FIGNALVTMYSRWGMLDEARRVFDEMPER--DLVSWNAMISGYAQEGKCYGLEAVLLFVN 268

Query: 282 MLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M+   +    ++    +SAC   +   +G Q+H    K G+  + SV N  ++ YS C  
Sbjct: 269 MVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEV 328

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
             +A  +F  +  +++VSW TMIS   +      A+  +  M+  G+ P++ TF  L+ +
Sbjct: 329 PKDAKAVFESISNRNVVSWTTMISIDEE-----DAVSLFNAMRVNGVYPNDVTFIGLIHA 383

Query: 399 SGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
                +V     IH     +  ++   VSN+ I+ YAK E I+++ +IF  ++ R  ++W
Sbjct: 384 VTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSW 443

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYV 513
           N LI+G+  NG   + L  +   +  E++P++YT    L++ A     SL HGK  H ++
Sbjct: 444 NALISGYAQNGSYKEALLTYLSAV-KEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHL 502

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           LK  L +   +  A++ +Y K GD+  S RVFN  +E+   +W A+ISAYA+HG+ +  +
Sbjct: 503 LKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVM 562

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           S +  M+  G I PD  TF +VL+AC   G+VD G R+FDSMV  +   P  +H S M+D
Sbjct: 563 SLYTEMEREG-INPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVD 621

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           +LGR G LDEAE +++            +L  +C  HGN+ +   + G L+E +      
Sbjct: 622 MLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGP 681

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YVL++N+YA  G WE+ A +R  ++  GV K+ G SW+
Sbjct: 682 YVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWV 719



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 172/586 (29%), Positives = 287/586 (48%), Gaps = 35/586 (5%)

Query: 133 CTKMGH-VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR---EMHKLDVRRD 188
           C+K  H + +    FD +P  +    N  +  C  +      +  F+   ++H L+   D
Sbjct: 20  CSKFFHALKHDHHQFDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLE-NVD 78

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
             + A  L  C  G  + G Q+H     SGF   V+V N+L+ MY   GN   A  VFE 
Sbjct: 79  EVTVALSLKACQ-GESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFEN 137

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
                 D +S+N ++ G        +AL   R M    +    +T+ S ++ C       
Sbjct: 138 LSH--PDIVSWNTVLSGFE---ESVDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFL 192

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G+Q+H+  +K G      + NA +TMYS  G +DEA  +F  + E+D+VSWN MIS YA
Sbjct: 193 FGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYA 252

Query: 366 QRN--LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN 420
           Q     G  A+L ++ M   G+  D  +    +++ G ++ +E+   IH      G  T+
Sbjct: 253 QEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTH 312

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V N L+S Y+K E  K A  +F ++S RN+++W T+I+    +   +     F+ + +
Sbjct: 313 VSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEEDAVSL-----FNAMRV 367

Query: 481 SELRPDEYTLSVALSSCARISSL-RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           + + P++ T  + L     I +L   G  IHG  +K+  +S+ ++ N+ IT+YAK   + 
Sbjct: 368 NGVYPNDVTF-IGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQ 426

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            S ++F  +  ++T+SWNALIS YAQ+G  KEA+  +  +  V  IKP+Q TF +VL+A 
Sbjct: 427 ESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTY--LSAVKEIKPNQYTFGSVLNAI 484

Query: 600 SHAGLVD-DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           + A  +  +  +   S +   G          +LD+ G+ G + E++RV N + ++    
Sbjct: 485 AAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFN-ETLERTQF 543

Query: 659 NWWALFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIYA 702
            W A+ SA A HG+      +  L   +ERE   P     LS + A
Sbjct: 544 AWTAIISAYARHGDF---ESVMSLYTEMEREGINPDSITFLSVLAA 586



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 191/422 (45%), Gaps = 56/422 (13%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +A+ LFV +   H +  D  SL+  ++AC +++N   G Q+H    + G   +  V N +
Sbjct: 261 EAVLLFVNM-VRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVL 319

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +S Y         K VF  I N +V SWTT +S       +D          +  + ++N
Sbjct: 320 MSTYSKCEVPKDAKAVFESISNRNVVSWTTMIS-------ID---------EEDAVSLFN 363

Query: 159 AM-ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKS 217
           AM + G   N    IG+     +H + +R                L+  G  +H L  KS
Sbjct: 364 AMRVNGVYPNDVTFIGL-----IHAVTIRN---------------LVTEGLTIHGLCIKS 403

Query: 218 GFSCLVSVVNALITMY--FNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEE 274
            F    +V N+ ITMY  F C  + ++ K+FEE     C + +S+N ++ G A  G  +E
Sbjct: 404 CFLSEQTVSNSFITMYAKFEC--IQESTKIFEELN---CRETVSWNALISGYAQNGSYKE 458

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           AL+ +    V  ++P++ TF SV++A      +    G   H+  +K G      VS A 
Sbjct: 459 ALLTYLSA-VKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGAL 517

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           + MY   G I E+  +F    E+   +W  +IS YA+     S +  Y EM+  GI PD 
Sbjct: 518 LDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDS 577

Query: 390 FTFGSLLASSGFIEMVEMIH----AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            TF S+LA+     MV+  H    + V  + I    +  + ++    +  R+ +A ++ H
Sbjct: 578 ITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMH 637

Query: 446 NM 447
            +
Sbjct: 638 QI 639


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 215/694 (30%), Positives = 364/694 (52%), Gaps = 48/694 (6%)

Query: 53  LKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++P D  + S+ L +C   R+   G  +HA  +   ++    + N+++SLY  + D    
Sbjct: 57  IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + VF                            E   +   RD+  ++AM+     NG E 
Sbjct: 117 EDVF----------------------------ETMRRFGKRDVVSWSAMMACYGNNGREL 148

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNAL 229
             I +F E  +L +  ++Y + +V+  C ++  +  GR     + K+G F   V V  +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208

Query: 230 ITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           I M+    N  + A KVF+  K    + +++ +M+     +G   EA+  F DM+++   
Sbjct: 209 IDMFVKGENSFENAYKVFD--KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEA 342
             + T  SV SAC       +G Q+H+ A++SG      V  + + MY+ C   G +D+ 
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDC 324

Query: 343 CMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG 400
             +F R+++  ++SW  +I+ Y +  NL   AI  + EM + G + P+ FTF S   + G
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 401 FI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            +    + + +    F  G+ +N  V+N++IS + K++R++ A + F ++S +N++++NT
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
            ++G   N    Q  +  SE+   EL    +T +  LS  A + S+R G+QIH  V+K  
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L     + NA+I++Y+KCG +D + RVFN M  ++ ISW ++I+ +A+HG     +  F 
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M + G +KP++ T+ A+LSACSH GLV +G R F+SM  D+   P  +H +CM+DLL R
Sbjct: 565 QMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
           AG L +A   IN+   QA    W     AC  H N  LG++ A  +LE + ++P+ Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNIYA AG WEE+  +R  +K   ++K+ GCSWI
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++A+  F+ +  S   + D ++LS+  +ACA L N + G QLH++A+R+GL     V
Sbjct: 248 GFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDV 304

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
             +++ +Y                            + C+  G VD   +VFD+M D  +
Sbjct: 305 ECSLVDMY----------------------------AKCSADGSVDDCRKVFDRMEDHSV 336

Query: 155 PVYNAMITGCTEN-GYEDIGIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
             + A+ITG  +N       I LF EM  +  V  ++++F+S    C +      G+Q+ 
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K G +   SV N++I+M+     + DA + FE       + +SYN  +DG      
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK--NLVSYNTFLDGTCRNLN 454

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
            E+A     ++    L  S  TF S++S        R G Q+H+Q +K G      V NA
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I+MYS CG ID A  +F  ++ ++++SW +MI+ +A+       +  + +M   G++P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574

Query: 389 EFTFGSLLASSGFIEMV 405
           E T+ ++L++   + +V
Sbjct: 575 EVTYVAILSACSHVGLV 591


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 212/689 (30%), Positives = 359/689 (52%), Gaps = 50/689 (7%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D   L   L AC N ++   G  +H   +  GL+    +  T+++ Y +       K VF
Sbjct: 2   DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             ++NP                     CE+          ++N ++ G T+N      + 
Sbjct: 62  DNMENP---------------------CEI---------SLWNGLMAGYTKNYMYVEALE 91

Query: 176 LFREM-HKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITM 232
           LF ++ H   ++ D+Y++ SV   C  GL  +  G+ +H+ + K+G    + V ++L+ M
Sbjct: 92  LFEKLLHYPYLKPDSYTYPSVFKAC-GGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGM 150

Query: 233 YFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           Y  C     A  +F E   K   C    +N ++      G  ++AL  F  M      P+
Sbjct: 151 YGKCNAFEKAIWLFNEMPEKDVAC----WNTVISCYYQSGNFKDALEYFGLMRRFGFEPN 206

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            +T  + +S+C   L    G ++H + + SGF   + +S+A + MY  CG ++ A  IF 
Sbjct: 207 SVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFE 266

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
           ++ +K +V+WN+MIS Y  +    S I  +  M + G++P   T  SL+   + S  +  
Sbjct: 267 QMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLE 326

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + +H +   N I  ++ V+++L+  Y K  +++ A +IF  +    +++WN +I+G++ 
Sbjct: 327 GKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVA 386

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
            G   + L  FSE+  S +  D  T +  L++C+++++L  GK+IH  +++  L +   +
Sbjct: 387 EGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVV 446

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             A++ +YAKCG +D +  VF  + ++D +SW ++I+AY  HG    A+  F  M     
Sbjct: 447 MGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQ-SN 505

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +KPD+  F A+LSAC HAGLVD+G   F+ M+N YG IP  +H SC++DLLGRAG L EA
Sbjct: 506 VKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEA 565

Query: 645 ERVINSQHIQARSDNWW--ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
             ++  Q+ + R D      LFSAC  H N+ LG  IA  L++++ D  S Y+LLSN+YA
Sbjct: 566 YEILQ-QNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYA 624

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +A  W+E   +R  +K  G+ K PGCSWI
Sbjct: 625 SAHKWDEVRVVRSKMKELGLKKNPGCSWI 653



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/598 (22%), Positives = 251/598 (41%), Gaps = 75/598 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +++  Y +AL LF ++     LKPD Y+  +   AC  L     G  +H   ++ G
Sbjct: 77  MAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V ++++ +Y           +F+E+   DV  W T +S   + G+   A E F 
Sbjct: 137 LMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYF- 195

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                                      GL R   +     ++ +  + +S C A LL+  
Sbjct: 196 ---------------------------GLMR---RFGFEPNSVTITTAISSC-ARLLDLN 224

Query: 208 R--QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           R  ++H  +  SGF     + +AL+ MY  CG++  A ++FE+        +++N M+ G
Sbjct: 225 RGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTV--VAWNSMISG 282

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAY 322
               G +   +  F+ M    ++P+  T  S++  C    R+  G  VH   +++  +  
Sbjct: 283 YGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPD 342

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+++ + +Y  CGK++ A  IF  + +  +VSWN MIS Y        A+  + EM+ 
Sbjct: 343 VFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK 402

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             +  D  TF S+L +   +  +E    IH  +    +  N  V  AL+  YAK   + +
Sbjct: 403 SYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A+ +F  +  R++++W ++I  +  +G     L+ F+E+L S ++PD       LS+C  
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGH 522

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
              +  G                   N MI +Y                I      ++ L
Sbjct: 523 AGLVDEGCYYF---------------NQMINVYG---------------IIPRVEHYSCL 552

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           I    + G   EA   ++ +Q    I+ D    + + SAC     +D G  I  ++++
Sbjct: 553 IDLLGRAGRLHEA---YEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLID 607



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 204/432 (47%), Gaps = 46/432 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +SG+++DAL  F  +      +P+  +++T +++CA L +   G ++H   +
Sbjct: 176 NTVISCYYQSGNFKDALEYF-GLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELI 234

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +G      +++ ++ +Y     L     +F                             
Sbjct: 235 NSGFLLDSFISSALVDMYGKCGHLEMAIEIF----------------------------- 265

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC--DAG 202
             ++MP + +  +N+MI+G    G     I LF+ M+   V+    + +S++ VC   A 
Sbjct: 266 --EQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSAR 323

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNV 261
           LLE G+ +H    ++     V V ++L+ +YF CG V  A K+F+   K  V   +S+NV
Sbjct: 324 LLE-GKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKV---VSWNV 379

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           M+ G  + G++ EAL  F +M  + +    +TF SV++AC        G ++H   ++  
Sbjct: 380 MISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKK 439

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    V  A + MY+ CG +DEA  +F  L ++D+VSW +MI+ Y        A+  + 
Sbjct: 440 LDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFA 499

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKN 434
           EM    ++PD   F ++L++ G   +V+      +  + + GII  ++  + LI    + 
Sbjct: 500 EMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRA 559

Query: 435 ERIKQAYQIFHN 446
            R+ +AY+I   
Sbjct: 560 GRLHEAYEILQQ 571



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 35/285 (12%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ ++  N  ++     G     + LF ++++   +KP + +LS+ +  C+       G 
Sbjct: 270 KKTVVAWNSMISGYGLKGDIISCIQLFKRMYNE-GVKPTLTTLSSLIMVCSRSARLLEGK 328

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y +R                              + IQ PDV+  ++ +    K G
Sbjct: 329 FVHGYTIR------------------------------NRIQ-PDVFVNSSLMDLYFKCG 357

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            V+ A ++F  +P   +  +N MI+G    G     +GLF EM K  V  D  +F SVL+
Sbjct: 358 KVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLT 417

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C     LE G+++H+L+ +        V+ AL+ MY  CG V +A  VF+       D 
Sbjct: 418 ACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR--DL 475

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +S+  M+    S G    AL  F +ML ++++P  + F++++SAC
Sbjct: 476 VSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSAC 520



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N+ ++     G   +AL LF ++  S+ ++ D  + ++ L AC+ L     G 
Sbjct: 371 KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY-VESDAITFTSVLTACSQLAALEKGK 429

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H   +   L     V   +L +Y     +     VF  +   D+ SWT+ ++A    G
Sbjct: 430 EIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHG 489

Query: 138 HVDYACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           H   A E+F +M      PDR    + A+++ C   G  D G   F +M
Sbjct: 490 HAYGALELFAEMLQSNVKPDR--VAFLAILSACGHAGLVDEGCYYFNQM 536


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 208/610 (34%), Positives = 330/610 (54%), Gaps = 19/610 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE--DIGIGLFREMHKLDVRRDNYSF 192
           K GH+  A  VF+ +  +++  YN +I G + NG +  +  + LFR M   ++  D ++F
Sbjct: 55  KCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTF 114

Query: 193 ASVLSVCDAGLLEFG-----RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             V +   A  L  G     RQ+H L  K+     V V ++L+  Y   G V +A K+F+
Sbjct: 115 PGVFT---AAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFD 171

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV- 306
                  + +S+  M+ G AS    +EAL  F  M +     +E  F SV+SA +CP   
Sbjct: 172 RMPER--NLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFV 229

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G QVH   +K+G   + SV NA +TMY+ CG ++ + M+F    +K+ ++W+ +I+ Y
Sbjct: 230 DSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGY 289

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGF--IEMVEMIHAFVFINGIITNI 421
           +Q      A+  + +M   G  P EFT  G L A S    IE  +  H ++  +G  T I
Sbjct: 290 SQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQI 349

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
             + AL+  YAK      A + F  +   +++ W ++I G++ NG   + L  +  + M 
Sbjct: 350 YTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMR 409

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           ++ P+E T++  L +C+ +++L  GKQIH   +K  L  ++S+ +A+ T+YAKCG L+  
Sbjct: 410 KILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEG 469

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           + +F  M+++D +SWNA+IS  +Q+G G+EA+  F+ M+  G  KPD  TF  VLSACSH
Sbjct: 470 VLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEG-TKPDHITFVTVLSACSH 528

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            G+V  G   F+ M +++  +P  +H +CM+D+L RAG L+EA+  I S  I      W 
Sbjct: 529 MGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWR 588

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  H N  LG      L+E    + S YVLLS+IY A G   +   +R ++K  G
Sbjct: 589 ILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRG 648

Query: 722 VIKQPGCSWI 731
           V K+ GCSWI
Sbjct: 649 VRKETGCSWI 658



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 259/498 (52%), Gaps = 16/498 (3%)

Query: 188 DNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKV 245
            N SF ++L    D   L+ G+ LH+ + K  + S    + N LI  Y  CG++  A  V
Sbjct: 6   QNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLV 65

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALI--RFRDMLVASLRPSELTFVSVMSACL- 302
           FE  K    + +SYN ++ GL+  G      +   FR M+  ++ P   TF  V +A   
Sbjct: 66  FENLKHK--NVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAAL 123

Query: 303 ---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
              C     QVH   +K+       V ++ +  Y   G + EA  +F R+ E+++VSW T
Sbjct: 124 NLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTT 183

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFING 416
           MIS YA + + + A+  +  M+ V    +EF F S+L++     F++  + +H  V  NG
Sbjct: 184 MISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNG 243

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++  + V NAL++ YAK   +  +  +F   S +N ITW+ LI G+   G   + L+ FS
Sbjct: 244 VLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFS 303

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++  +   P E+TL   L +C+ ++++  GKQ HGY+LK+   +++    A++ +YAK G
Sbjct: 304 KMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFG 363

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
               + + F+ ++E D + W ++I+ Y Q+G+ +EA+S +  MQ + +I P++ T  +VL
Sbjct: 364 FTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQ-MRKILPNELTMASVL 422

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            ACS+   ++ G +I    +  YG  P     S +  +  + G L+E   +I  + +Q  
Sbjct: 423 KACSNLAALEQGKQIHARTIK-YGLGPELSIRSALSTMYAKCGSLEEG-VLIFRRMLQRD 480

Query: 657 SDNWWALFSACAAHGNLR 674
             +W A+ S  + +G+ R
Sbjct: 481 IVSWNAMISGLSQNGHGR 498



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 225/455 (49%), Gaps = 13/455 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV+  ++ ++   K+G V  A ++FD+MP+R+L  +  MI+G          +G+F  M 
Sbjct: 146 DVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR 205

Query: 182 KLDVRRDNYSFASVLS--VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            ++   + + F SVLS  VC    ++ G+Q+H +V K+G    VSV+NAL+TMY  CGN+
Sbjct: 206 LVEGNLNEFVFTSVLSALVCPE-FVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNL 264

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             +  +FE       + I+++ ++ G +  G   +AL  F  M  A   PSE T V V+ 
Sbjct: 265 NYSLMLFEMCSDK--NAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLK 322

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G Q H   +KSG+E     + A + MY+  G   +A   F  L E D+V 
Sbjct: 323 ACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVL 382

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVF 413
           W ++I+ Y Q      A+  Y  MQ   I P+E T  S+L +      +E  + IHA   
Sbjct: 383 WTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTI 442

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G+   + + +AL + YAK   +++   IF  M  R+I++WN +I+G   NG   + L+
Sbjct: 443 KYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALE 502

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLY 532
            F E+ +   +PD  T    LS+C+ +  ++ G      +     L+ ++     M+ + 
Sbjct: 503 LFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVL 562

Query: 533 AKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQH 566
           ++ G L+ +   + + +I+     W  L+ A   H
Sbjct: 563 SRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNH 597



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 35/275 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   S++G    AL LF ++H +    P  ++L   L AC+++     G Q H Y L++G
Sbjct: 286 ITGYSQAGDSHKALKLFSKMHYA-GFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSG 344

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   + A  ++ +Y         ++ F  +  PD+  WT+                   
Sbjct: 345 YETQIYTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTS------------------- 385

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                       +I G  +NG  +  + ++  M    +  +  + ASVL  C +   LE 
Sbjct: 386 ------------IIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQ 433

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+H+   K G    +S+ +AL TMY  CG++ +   +F        D +S+N M+ GL
Sbjct: 434 GKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQR--DIVSWNAMISGL 491

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  G   EAL  F +M +   +P  +TFV+V+SAC
Sbjct: 492 SQNGHGREALELFEEMRLEGTKPDHITFVTVLSAC 526



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 133/264 (50%), Gaps = 11/264 (4%)

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQ 442
           P   +F +LL   A    ++  +++HA +     +++   ++N LI  YAK   +  A  
Sbjct: 5   PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQG--LQHFSELLMSELRPDEYTLSVALSSCA-R 499
           +F N+  +N++++N LI+G   NG       L+ F  ++ + + PD +T     ++ A  
Sbjct: 65  VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +      +Q+H   +K   I  + +G++++  Y K G +  + ++F+ M E++ +SW  +
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184

Query: 560 ISAYAQHGEGKEAVSCFKAMQDV-GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           IS YA     KEA+  F  M+ V G +  ++  FT+VLSA      VD G ++   +V +
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNL--NEFVFTSVLSALVCPEFVDSGKQVHCVVVKN 242

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLD 642
            G +     L+ ++ +  + G L+
Sbjct: 243 -GVLEFVSVLNALVTMYAKCGNLN 265



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 10/178 (5%)

Query: 12  GNSNTSKELLLKLNISL-----ANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA 66
           G++    + LL+ ++ L     A   ++G  ++AL ++ ++    K+ P+  ++++ L A
Sbjct: 366 GDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQM-RKILPNELTMASVLKA 424

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C+NL     G Q+HA  ++ GL     + + + ++Y     L     +F  +   D+ SW
Sbjct: 425 CSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSW 484

Query: 127 TTFLSACTKMGHVDYACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
              +S  ++ GH   A E+F++M       D   +  +++ C+  G    G   F  M
Sbjct: 485 NAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMM 542


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  348 bits (893), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 193/537 (35%), Positives = 304/537 (56%), Gaps = 12/537 (2%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNA-LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +E GR+LH +V+ S   C   V+N  +ITMY  CG+  D+  VF++ +    +   +N +
Sbjct: 121 IEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK--NLFQWNAI 178

Query: 263 MDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           +         E+A+  F +++ V   +P   T   V+ AC   L   +G  +H  A K  
Sbjct: 179 VSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMD 238

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACM-IFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +   V NA I MY  CG ++EA   +F  +  K + SWN ++  YAQ +  R A+  Y
Sbjct: 239 LVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLY 298

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN 434
           L+M   G+ PD FT GSLL +   ++ +   E IH F   NG+  +  +  +L+S Y   
Sbjct: 299 LQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICC 358

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            +   A  +F  M  R++++WN +I G+  NG P + +  F ++L   ++P E  +    
Sbjct: 359 GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVC 418

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            +C+++S+LR GK++H + LK +L   + + +++I +YAK G +  S R+F+ + EKD  
Sbjct: 419 GACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVA 478

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN +I+ Y  HG GKEA+  F+ M  +G +KPD  TFT +L ACSHAGLV+DG   F+ 
Sbjct: 479 SWNVIIAGYGIHGRGKEALELFEKMLRLG-LKPDDFTFTGILMACSHAGLVEDGLEYFNQ 537

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M+N +   P  +H +C++D+LGRAG +D+A R+I        S  W +L S+C  HGNL 
Sbjct: 538 MLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLG 597

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LG  +A  LLE E +KP  YVL+SN++A +G W++   +R  +K  G+ K  GCSWI
Sbjct: 598 LGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWI 654



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 239/483 (49%), Gaps = 17/483 (3%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGL 203
           VFDK+  ++L  +NA+++  T N   +  + +F E+  + + + DN++   V+  C AGL
Sbjct: 163 VFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC-AGL 221

Query: 204 LE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK-VFEEAKGYVCDHISYN 260
           L+   G+ +H + TK      V V NALI MY  CG V +A K VF+          S+N
Sbjct: 222 LDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVS--SWN 279

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
            ++ G A      +AL  +  M  + L P   T  S++ AC   +    G ++H  A+++
Sbjct: 280 ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRN 339

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G      +  + +++Y  CGK   A ++F  ++ + +VSWN MI+ Y+Q  L   AI  +
Sbjct: 340 GLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLF 399

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
            +M S GI+P E     +  +   +  + +   +H F     +  +I VS+++I  YAK 
Sbjct: 400 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 459

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             I  + +IF  +  +++ +WN +I G+ ++G   + L+ F ++L   L+PD++T +  L
Sbjct: 460 GCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGIL 519

Query: 495 SSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI-EKD 552
            +C+    +  G +    +L  +N+  K+     ++ +  + G +D +LR+   M  + D
Sbjct: 520 MACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPD 579

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
           +  W++L+S+   HG           + ++   KP+     + L A S  G  DD  R+ 
Sbjct: 580 SRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS--GKWDDVRRVR 637

Query: 613 DSM 615
             M
Sbjct: 638 GRM 640



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 234/484 (48%), Gaps = 50/484 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  ++  +R+  ++DA+ +F ++ S  + KPD ++L   + ACA L +   G  +H
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A +  L +   V N ++++Y                                K G V+
Sbjct: 232 GMATKMDLVSDVFVGNALIAMY-------------------------------GKCGLVE 260

Query: 141 YACE-VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
            A + VFD M  + +  +NA++ G  +N      + L+ +M    +  D ++  S+L  C
Sbjct: 261 EAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC 320

Query: 200 D-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDH 256
                L +G ++H    ++G +    +  +L+++Y  CG    A  +F+  E +  V   
Sbjct: 321 SRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLV--- 377

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
            S+NVM+ G +  G  +EA+  FR ML   ++P E+  + V  AC      R+G ++H  
Sbjct: 378 -SWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCF 436

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K+       VS++ I MY+  G I  +  IF RL+EKD+ SWN +I+ Y     G+ A
Sbjct: 437 ALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEA 496

Query: 374 ILAYLEMQSVGIRPDEFTF-GSLLASS--GFIE-MVEMIHAFVFINGIITNIQVSNALIS 429
           +  + +M  +G++PD+FTF G L+A S  G +E  +E  +  + ++ I   ++    ++ 
Sbjct: 497 LELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD 556

Query: 430 AYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPD 486
              +  RI  A ++   M   P + I W++L++   ++G    G +  ++LL +   +P+
Sbjct: 557 MLGRAGRIDDALRLIEEMPGDPDSRI-WSSLLSSCRIHGNLGLGEKVANKLLELEPEKPE 615

Query: 487 EYTL 490
            Y L
Sbjct: 616 NYVL 619


>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
 gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
          Length = 770

 Score =  348 bits (893), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 217/692 (31%), Positives = 368/692 (53%), Gaps = 65/692 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++++  L AC        G+Q+H +++         V+N+++++Y  +        +F
Sbjct: 65  DEFTVANALKACRGY--PLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIF 122

Query: 116 SEIQNPDVYSWTTFLSAC-TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
             + +PD+ SW T LS C T      +AC                               
Sbjct: 123 ENLTHPDIVSWNTVLSGCQTSEDAFSFAC------------------------------- 151

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
               +M+   V  D  ++ +VLS C    +A  L  G QLHS + K GF C V V NALI
Sbjct: 152 ----KMNSSGVVFDAVTYTTVLSFCWRHVEAYFL-IGLQLHSCIVKFGFDCEVFVGNALI 206

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRP 289
           +MY   G++V+A +VFEE K    D +S+N M+ G +  G    EA+  F  M    +  
Sbjct: 207 SMYSRWGHLVEARRVFEEMKTR--DLVSWNAMISGYSQEGIYGLEAISMFLQMFRGGMEL 264

Query: 290 SELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
             ++F S +SAC   +   +  Q+H  ++K+  E + +VSN  I+ Y  C  I++A ++F
Sbjct: 265 DRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVF 324

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV- 405
             + E+++VSW TMIS          A+  + EM+  G+ P++ TF  L+ +    E+V 
Sbjct: 325 QNMNERNVVSWTTMISIDEAE-----AVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVV 379

Query: 406 --EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             +M+H F    G  +   V N++I+ YAK + ++ + ++F  +  ++II WN LI+GF+
Sbjct: 380 QGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFV 439

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSS--CARISSLRHGKQIHGYVLKNNLISK 521
            NG   + ++ F   L+ E +P++Y+    L++   A   SL++G++ H  ++K  L + 
Sbjct: 440 HNGLCQEAIRAFFSGLI-ESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTD 498

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             + +A++ +YAK G +  S +VF    ++   +W  +ISAYA+HG+ +  ++ F+ M+ 
Sbjct: 499 PIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRR 558

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           +  ++PD  TF ++L+AC   G+VD G  +F SMV DY   P+ +H SC++D+LGRAG L
Sbjct: 559 L-EVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRL 617

Query: 642 DEAERVINSQHIQARS--DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
           +EAER+++  HI          +L  AC  HGN+ +G  +A  L+E E  +   YVL+SN
Sbjct: 618 EEAERLMS--HIPGGPGLSVLQSLLGACRVHGNVDMGERVADALMEMEPTESGSYVLMSN 675

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +YA  G WE  A +R+ ++  GV K+ G SW+
Sbjct: 676 LYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWV 707



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 158/555 (28%), Positives = 266/555 (47%), Gaps = 54/555 (9%)

Query: 135 KMGHVDYACEVFDKMPDRDLP---VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           K G   +A  + DK P R+L    +   +++G   N                    D ++
Sbjct: 28  KTGESSHAHNLLDKTPHRNLSFQIIKEHLLSGFINN-------------------IDEFT 68

Query: 192 FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            A+ L  C  G    G Q+H       F  +  V N+L+ MY   G    A  +FE    
Sbjct: 69  VANALKAC-RGYPLLGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTH 127

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR------ 305
              D +S+N ++ G  +    E+A      M  + +    +T+ +V+S   C R      
Sbjct: 128 P--DIVSWNTVLSGCQT---SEDAFSFACKMNSSGVVFDAVTYTTVLS--FCWRHVEAYF 180

Query: 306 -VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            +G Q+H+  +K GF+    V NA I+MYS  G + EA  +F  ++ +D+VSWN MIS Y
Sbjct: 181 LIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGY 240

Query: 365 AQRNL-GRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITN 420
           +Q  + G  AI  +L+M   G+  D  +F S +++ G+   +E+   IH          +
Sbjct: 241 SQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKH 300

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + VSN LIS Y K + I+ A  +F NM+ RN+++W T+I+   ++    + +  F+E+ +
Sbjct: 301 VAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS---ID--EAEAVSFFNEMRL 355

Query: 481 SELRPDEYTLSVALSSCARISSL-RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
             + P++ T  V L     I  L   GK +HG+  K    SK ++ N++IT+YAK   + 
Sbjct: 356 DGVYPNDVTF-VGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQ 414

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            S++VF  +  +D I+WNALIS +  +G  +EA+  F     +   KP+Q +F ++L+A 
Sbjct: 415 DSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAF--FSGLIESKPNQYSFGSILNAI 472

Query: 600 SHAGLV--DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
             A  V    G R    ++   G        S +LD+  + G + E+++V      Q++ 
Sbjct: 473 GAAEDVSLKYGQRCHSQIIK-LGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQF 531

Query: 658 DNWWALFSACAAHGN 672
             W  + SA A HG+
Sbjct: 532 -AWTTIISAYARHGD 545



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 265/591 (44%), Gaps = 86/591 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVA 95
           +DA     +++SS  +  D  + +T L+ C     A F  G QLH+  ++ G      V 
Sbjct: 144 EDAFSFACKMNSS-GVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFDCEVFVG 202

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N ++S+Y     LV  +RVF E++  D+ SW                             
Sbjct: 203 NALISMYSRWGHLVEARRVFEEMKTRDLVSW----------------------------- 233

Query: 156 VYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSL 213
             NAMI+G ++ G Y    I +F +M +  +  D  SF S +S C     LE  RQ+H L
Sbjct: 234 --NAMISGYSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGL 291

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             K+     V+V N LI+ YF C  + DA  VF+       + +S+  M+    S+    
Sbjct: 292 SIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNER--NVVSWTTMI----SIDEA- 344

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           EA+  F +M +  + P+++TFV ++ A     +   G  VH    K+GF + ++V N+ I
Sbjct: 345 EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSII 404

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           TMY+    + ++  +F  L+ +DI++WN +IS +    L + AI A+     +  +P+++
Sbjct: 405 TMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFS-GLIESKPNQY 463

Query: 391 TFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           +FGS+L + G  E V +      H+ +   G+ T+  VS+AL+  YAK   I ++ ++F 
Sbjct: 464 SFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFV 523

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               ++   W T+I+ +  +G     +  F E+   E+RPD  T    L++C R   +  
Sbjct: 524 ETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDM 583

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G  + G ++K                              +  IE     ++ L+    +
Sbjct: 584 GCHLFGSMVK------------------------------DYQIEPSAEHYSCLVDMLGR 613

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            G  +EA      +       P  +   ++L AC   G VD G R+ D+++
Sbjct: 614 AGRLEEAERLMSHIPG----GPGLSVLQSLLGACRVHGNVDMGERVADALM 660



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 21/222 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQ--IHSSHKLKPDIYSLSTTLAACANLRNAA--FG 76
           ++  N  ++    +G  Q+A+  F    I S    KP+ YS  + L A     + +  +G
Sbjct: 428 IIAWNALISGFVHNGLCQEAIRAFFSGLIES----KPNQYSFGSILNAIGAAEDVSLKYG 483

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            + H+  ++ GL   P V++ +L +Y     +   ++VF E      ++WTT +SA  + 
Sbjct: 484 QRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARH 543

Query: 137 GHVDYACEVFDKMPDRDLPV------YNAMITGCTENGYEDIGIGLFREM---HKLDVRR 187
           G  +     F++M  R L V      + +++T C   G  D+G  LF  M   ++++   
Sbjct: 544 GDYESVMNWFEEM--RRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIEPSA 601

Query: 188 DNYSFASVLSVCDAGLLEFGRQLHSLVTKS-GFSCLVSVVNA 228
           ++YS   V  +  AG LE   +L S +    G S L S++ A
Sbjct: 602 EHYS-CLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGA 642


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 330/616 (53%), Gaps = 10/616 (1%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N  VY  T FL    K+G + YA  +F++MP RD+  +NA+I G + NGY+   + +F +
Sbjct: 85  NQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQ 144

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +        +   ++  C    + F G+ +H    KSG      V NAL +MY  C +
Sbjct: 145 MLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCAD 204

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A  +FEE   +    +S+N M+      G  +EA++ F+ M    +  + +T +S++
Sbjct: 205 LQAAEVLFEEI--FEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLL 262

Query: 299 SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
           SA          H   +K+GF    SV  + +  Y+ CG I+ A +++  + ++++VS  
Sbjct: 263 SANAHLD---STHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLT 319

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
            MIS YA++      +  + +M  + ++PD     S+L       FI     IHA+    
Sbjct: 320 AMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKT 379

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+  +  V N LIS Y+K   I+  + +F  M  + +I+WN++I+  +  G     ++ F
Sbjct: 380 GLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELF 439

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++ M    PD  T++  L+ C+ +  L+ G+++H YVL+NNL  +  L  A++ +Y KC
Sbjct: 440 CQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKC 499

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L+ + RVF  + E    +WN +IS Y   G    A+SC+  MQ+ G +KPD+ TF  V
Sbjct: 500 GRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQG-LKPDRITFLGV 558

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSAC+H GLV +G R F SM  D+G IP   H +CM+DLL RAG+L+EA   + +  ++ 
Sbjct: 559 LSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEP 618

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            S  W AL ++C  H  L+LG  +A  LL  +     +YVL+SN+YA+ G W++ A +R+
Sbjct: 619 DSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRK 678

Query: 716 LLKRTGVIKQPGCSWI 731
           ++K TG     G S I
Sbjct: 679 MMKDTGGDGSSGISLI 694



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 228/446 (51%), Gaps = 12/446 (2%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+ + + KSGF+  V +  A +  Y   G +  A  +FEE      D +S+N ++ G + 
Sbjct: 74  QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRR--DVVSWNALICGYSR 131

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSV 325
            G   +AL  F  ML     P + T V ++ +C  P + +Q   +H   +KSG +    V
Sbjct: 132 NGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRV 191

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA  +MY+ C  +  A ++F  + EK  VSWNTMI  Y Q  L   A+L + +MQ   +
Sbjct: 192 KNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERV 251

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             +  T  SLL+++  ++     H +V   G  T+  V  +L+ +YA    I+ A  +++
Sbjct: 252 EVNYVTIISLLSANAHLDST---HCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYN 308

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  RN+++   +I+G+   G     ++ F+++L  +++PD   +   L      + +  
Sbjct: 309 LMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGS 368

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G  IH Y LK  L +   + N +I++Y+K GD++    +F+ M EK  ISWN++ISA  Q
Sbjct: 369 GLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQ 428

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G   +A+  F  M+  G   PD  T  ++L+ CS  G +  G R+ + ++ +   +  E
Sbjct: 429 VGRTSDAMELFCQMRMYGH-SPDAITIASLLAGCSEVGFLQFGERLHNYVLRNN--LDME 485

Query: 626 DHL-SCMLDLLGRAGYLDEAERVINS 650
           D L + ++D+  + G L+ AERV  S
Sbjct: 486 DFLETALVDMYIKCGRLESAERVFKS 511



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/555 (26%), Positives = 248/555 (44%), Gaps = 49/555 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+G+  DAL +FVQ+       P   +L   + +C        G  +H + +
Sbjct: 123 NALICGYSRNGYDYDALEVFVQMLR-EGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGI 181

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL     V N + S+Y    DL + + +F EI      SW T + A  + G  D A  
Sbjct: 182 KSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAML 241

Query: 145 VFDKMPDRDLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           VF +M    + V Y  +I+  + N + D                                
Sbjct: 242 VFKQMQKERVEVNYVTIISLLSANAHLD-------------------------------- 269

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
                  H  V K+GF+   SV+ +L+  Y  CGN+  A  ++        + +S   M+
Sbjct: 270 -----STHCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQR--NLVSLTAMI 322

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G A  G +   +  F  ML   ++P  +  VS++     P     G  +HA  +K+G  
Sbjct: 323 SGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLC 382

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           A   V N  I+MYS  G I+    +F+ + EK ++SWN++IS   Q      A+  + +M
Sbjct: 383 ADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQM 442

Query: 381 QSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G  PD  T  SLLA     GF++  E +H +V  N +     +  AL+  Y K  R+
Sbjct: 443 RMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRL 502

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A ++F ++    + TWNT+I+G+ L+G   + L  +SE+    L+PD  T    LS+C
Sbjct: 503 ESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSAC 562

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTIS 555
                +  GK+    + ++  +I  +     M+ L ++ G L +  + V NM +E D+  
Sbjct: 563 THGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAI 622

Query: 556 WNALISAYAQHGEGK 570
           W AL+++   H E K
Sbjct: 623 WGALLTSCCIHQELK 637



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 158/349 (45%), Gaps = 40/349 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+ L   ++  +  G+    +  F Q+    K+KPD  ++ + L    +      G  +H
Sbjct: 315 LVSLTAMISGYAEKGNMGLVVECFTQMLQL-KMKPDAVAMVSILHGFTDPTFIGSGLGIH 373

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           AY L+ GL A   V N ++S+Y    D+ +V  +FSE+    + SW + +SAC ++G   
Sbjct: 374 AYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTS 433

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A E+F +M      +Y                       H  D      + AS+L+ C 
Sbjct: 434 DAMELFCQM-----RMYG----------------------HSPDA----ITIASLLAGCS 462

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G L+FG +LH+ V ++       +  AL+ MY  CG +  A +VF+  K       ++
Sbjct: 463 EVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCL--ATW 520

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--VHAQAMKS 317
           N M+ G    G    AL  + +M    L+P  +TF+ V+SAC    + ++   + ++M+ 
Sbjct: 521 NTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMRE 580

Query: 318 GFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST 363
            F     + + A  + + S  G ++EA +    ++ E D   W  ++++
Sbjct: 581 DFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTS 629


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 219/707 (30%), Positives = 346/707 (48%), Gaps = 42/707 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +   H  +AL LFVQ   S   KP+ Y L++ + AC          Q+H   ++ G    
Sbjct: 116 THHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQD 175

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            +V  +++  Y     +   + +F  +Q    ++WTT                       
Sbjct: 176 VYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTT----------------------- 212

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                   +I G ++ G   + + LF +M +  V  D Y  +SVLS C     LE G+Q+
Sbjct: 213 --------IIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQI 264

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V +SG    VS+VN  I  YF C  V    K+F+       + +S+  ++ G     
Sbjct: 265 HCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDK--NVVSWTTVIAGCMQNS 322

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              +AL  F +M      P      SV+++C   +    G QVHA A+K   +    V N
Sbjct: 323 FHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKN 382

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             I MY+ C  + +A  +F  +   D+VS+N MI  Y++++    A+  + EM+     P
Sbjct: 383 GLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSP 442

Query: 388 DEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
               F SLL  S     +E+   IH  +   G+  +    +ALI  Y+K  R+  A  +F
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  ++I+ W  + +G+       + L+ +  L MS L+P+E+T +  +++ + I+SLR
Sbjct: 503 EEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLR 562

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           HG+Q H  V+K        + N ++ +YAK G ++ + + F     KDT  WN++I+ YA
Sbjct: 563 HGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYA 622

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHGE ++A+  F+ M   G +KP+  TF  VLSACSH GL+D G   FDSM + +G  P 
Sbjct: 623 QHGEAEKALQVFEDMIMEG-LKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPG 680

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H  CM+ LLGRAG L EA+  I    I+  +  W +L SAC   GN+ LG   A + +
Sbjct: 681 IEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAI 740

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                    YVLLSNI+A+ G+W     +RE +  +GV+K+PGCSWI
Sbjct: 741 SCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWI 787



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/573 (27%), Positives = 285/573 (49%), Gaps = 18/573 (3%)

Query: 112 KRVFSEI-----QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
           K++ S+I        D++   T L A +K+  V++A ++FD M  ++L  +++M++  T 
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117

Query: 167 NGYEDIGIGLFRE-MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS 224
           + +    + LF + M   + + + Y  ASV+  C   G L    Q+H LV K G+   V 
Sbjct: 118 HSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVY 177

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V  +LI  Y     + DA  +F+  +  V    ++  ++ G +  GR + +L  F  M  
Sbjct: 178 VCTSLIDFYTKHACIDDARLLFDGLQ--VKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKE 235

Query: 285 ASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             + P +    SV+SACL  +    G Q+H   ++SG     S+ N  I  Y  C K+  
Sbjct: 236 GHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQL 295

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
              +F R+ +K++VSW T+I+   Q +  R A+  ++EM  +G  PD F   S+L S G 
Sbjct: 296 GRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGS 355

Query: 402 IEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +  +E    +HA+     I  +  V N LI  YAK + +  A ++F+ M+  +++++N +
Sbjct: 356 LVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAM 415

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I G+       + L  F E+ +S   P        L   A +  L    QIHG ++K  +
Sbjct: 416 IEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGV 475

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                 G+A+I +Y+KC  +  +  VF  + +KD + W A+ S Y Q  E +E++  +K 
Sbjct: 476 SLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKC 535

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           +Q + R+KP++ TF AV++A S+   +  G + F + V   GF       + ++D+  ++
Sbjct: 536 LQ-MSRLKPNEFTFAAVITAASNIASLRHGQQ-FHNQVIKMGFDDDPFVANTLVDMYAKS 593

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           G ++EA +   S + +  +  W ++ +  A HG
Sbjct: 594 GSIEEAHKAFISTNWKDTA-CWNSMIATYAQHG 625



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 263/543 (48%), Gaps = 42/543 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  S+ G  Q +L LF Q+   H + PD Y LS+ L+AC  L+    G Q+H Y LR+G
Sbjct: 214 IAGYSKQGRSQVSLKLFDQMKEGH-VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSG 272

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +     + N  +  Y     +   +++F  + + +V SWTT                   
Sbjct: 273 IVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTT------------------- 313

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
                       +I GC +N +    + LF EM ++    D +   SVL+ C + + LE 
Sbjct: 314 ------------VIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEK 361

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GRQ+H+   K        V N LI MY  C ++ DA KVF        D +SYN M++G 
Sbjct: 362 GRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAA--IDLVSYNAMIEGY 419

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVM--SACLCP-RVGYQVHAQAMKSGFEAYT 323
           +   ++ EAL  FR+M ++   P+ L FVS++  SA L    +  Q+H   +K G     
Sbjct: 420 SRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDE 479

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
              +A I +YS C ++ +A ++F  +Q+KDIV W  M S Y Q++    ++  Y  +Q  
Sbjct: 480 FAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMS 539

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++P+EFTF +++ ++  I  +   +  H  V   G   +  V+N L+  YAK+  I++A
Sbjct: 540 RLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEA 599

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++ F + + ++   WN++I  +  +G   + LQ F +++M  L+P+  T    LS+C+  
Sbjct: 600 HKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHT 659

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNAL 559
             L  G      + +  +   +     M++L  + G L +    +  M I++  + W +L
Sbjct: 660 GLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSL 719

Query: 560 ISA 562
           +SA
Sbjct: 720 LSA 722



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 130/514 (25%), Positives = 251/514 (48%), Gaps = 28/514 (5%)

Query: 208 RQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           +++HS +   GF    + +VN L+  Y     V  A K+F+       + ++++ M+   
Sbjct: 58  KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHK--NLVTWSSMVSMY 115

Query: 267 ASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFE 320
                  EAL+ F + M   + +P+E    SV+ AC     L P +  Q+H   +K G+ 
Sbjct: 116 THHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPAL--QIHGLVVKGGYV 173

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  + I  Y+    ID+A ++F  LQ K   +W T+I+ Y+++   + ++  + +M
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233

Query: 381 QSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   + PD++   S+L++     F+E  + IH +V  +GI+ ++ + N  I  Y K  ++
Sbjct: 234 KEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKV 293

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           +   ++F  M  +N+++W T+I G + N F    L  F E+      PD +  +  L+SC
Sbjct: 294 QLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC 353

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
             + +L  G+Q+H Y +K N+ +   + N +I +YAKC  L  + +VFN+M   D +S+N
Sbjct: 354 GSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYN 413

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I  Y++  +  EA+  F+ M+ +    P    F ++L   +    ++   +I   ++ 
Sbjct: 414 AMIEGYSRQDKLCEALDLFREMR-LSLSSPTLLIFVSLLGVSASLYHLELSNQI-HGLII 471

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG----N 672
            YG    E   S ++D+  +   + +A  V   + IQ +    W A+FS          +
Sbjct: 472 KYGVSLDEFAGSALIDVYSKCSRVGDARLVF--EEIQDKDIVVWTAMFSGYTQQSENEES 529

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           L+L +      L+  + KP+ +   + I AA+ +
Sbjct: 530 LKLYKC-----LQMSRLKPNEFTFAAVITAASNI 558



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 180/436 (41%), Gaps = 66/436 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   SR     +AL LF ++  S    P +    + L   A+L +    NQ+H
Sbjct: 409 LVSYNAMIEGYSRQDKLCEALDLFREMRLSLS-SPTLLIFVSLLGVSASLYHLELSNQIH 467

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ G+       + ++ +Y     +   + VF EIQ+ D+  WT             
Sbjct: 468 GLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWT------------- 514

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AM +G T+    +  + L++ +    ++ + ++FA+V++   
Sbjct: 515 ------------------AMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAAS 556

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G+Q H+ V K GF     V N L+ MY   G++ +A K F        D   +
Sbjct: 557 NIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK--DTACW 614

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           N M+   A  G  E+AL  F DM++  L+P+ +TFV V+SAC         H   +  GF
Sbjct: 615 NSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSAC--------SHTGLLDLGF 666

Query: 320 EAYTSVSNAAI-----------TMYSSCGKIDEACMIFARLQEKD-IVSWNTMISTYAQR 367
           + + S+S   I           ++    GK+ EA     ++  K   V W +++S  A R
Sbjct: 667 DHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLS--ACR 724

Query: 368 NLGRSAILAYLEMQSVGIRPDE----FTFGSLLASSGFIEMVEMIHAFVFINGIITN--- 420
             G   +  Y    ++   P +        ++ AS G    V  +   + I+G++     
Sbjct: 725 VSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGC 784

Query: 421 --IQVSNALISAYAKN 434
             I+V+N +    AK+
Sbjct: 785 SWIEVNNEIHKFIAKD 800


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 220/686 (32%), Positives = 340/686 (49%), Gaps = 39/686 (5%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P   S    L  C   ++   G  +HA  LR G  +  ++ N++++LY     +V  K
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF  I N DV SW   ++  ++ G V Y+                              
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYS-----------------------------F 96

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR-QLHSLVTKSGFSCLVSVVNALIT 231
            + LF+ M   +   + ++F+ V +   +    FG  Q H+L  K+     V V ++LI 
Sbjct: 97  VMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLIN 156

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G ++DA KVF+       + +S+  ++ G A      EA   F  M        +
Sbjct: 157 MYCKIGCMLDARKVFDTIPER--NTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDK 214

Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
             + SV+SA   P +   G Q+H  A+K+G  +  SV NA +TMY  CG +D+A   F  
Sbjct: 215 FIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFEL 274

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMV 405
             +KD ++W+ MI+ YAQ      A+  +  M   G +P EFTF G + A S  G +E  
Sbjct: 275 SGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEG 334

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + IH +    G    I    AL+  YAK   +  A + F  +   +I+ W ++I+G+  N
Sbjct: 335 KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQN 394

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G     L  +  + M  + P E T++  L +C+ +++L  GKQIH   +K     ++ +G
Sbjct: 395 GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIG 454

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+ T+YAKCG L+    VF  M  +D ++WNA+IS  +Q+GEG +A+  F+ ++  G  
Sbjct: 455 SALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH-GTT 513

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KPD  TF  VLSACSH GLV+ G   F  M++++G +P  +H +CM+D+L RAG L E +
Sbjct: 514 KPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETK 573

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             I S  I      W  L  AC  + N  LG      L+E    + S Y+LLS+IY A G
Sbjct: 574 EFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALG 633

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
             ++   +R L+K  GV K+PGCSWI
Sbjct: 634 RSDDVERVRRLMKLRGVNKEPGCSWI 659



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 35/275 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   +++G   +AL+LF  +H +   KP  ++    + AC+++     G Q+H Y+L+AG
Sbjct: 287 ITGYAQAGDSHEALNLFYNMHLNGN-KPSEFTFVGVINACSDIGALEEGKQIHGYSLKAG 345

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   +    ++ +Y     LV  ++ F  ++ PD+  WT+                   
Sbjct: 346 YECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTS------------------- 386

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                       MI+G  +NG  +  + L+  M    +     + ASVL  C +   LE 
Sbjct: 387 ------------MISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQ 434

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+H+   K GFS  V + +AL TMY  CG++ D   VF        D +++N M+ GL
Sbjct: 435 GKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR--DIMTWNAMISGL 492

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  G   +AL  F ++   + +P  +TFV+V+SAC
Sbjct: 493 SQNGEGLKALELFEELRHGTTKPDYVTFVNVLSAC 527


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  348 bits (892), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 229/745 (30%), Positives = 376/745 (50%), Gaps = 75/745 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           + +  L +C      A    LH   +  GL +   + NT+L  Y +   L   +R+  ++
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I +P+V +    L+   K+G +  A E+F +MP RD+  +N +++G  ++      +  F
Sbjct: 66  IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             MH+  D   + ++FA  +  C A G      QL  +V K G      V  AL+ M+  
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185

Query: 236 CGNVVDACKVFEEAK------------GYV----CDH-------------ISYNVMMDGL 266
           CG V  A ++F   K            GYV     DH             +S+N+M+  L
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  GRV EAL    DM    +R    T+ S ++AC      R G Q+HAQ +++      
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDP 305

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A + +Y+ CG   EA  +F  L +++ V+W  +I+ + Q      ++  + +M++ 
Sbjct: 306 YVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAE 365

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK----- 433
            +  D+F   +L+  SG    +++     +H+    +G I  + VSN+LIS YAK     
Sbjct: 366 LMTLDQFALATLI--SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 423

Query: 434 ---------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
                    NE+                 I +A + F  MS +N+ITWN ++  ++ +G 
Sbjct: 424 SAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGA 483

Query: 468 PVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              GL+ ++ +L   ++RPD  T       CA + + + G QI G  +K  LI   S+ N
Sbjct: 484 EEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVAN 543

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+IT+Y+KCG +  + +VF+ +  KD +SWNA+I+ Y+QHG GK+A+  F  +   G  K
Sbjct: 544 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG-AK 602

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  ++ AVLS CSH+GLV +G   FD M   +   P  +H SCM+DLLGRAG+L EA+ 
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I+   ++  ++ W AL SAC  HGN  L  + A  + E +      Y+L++ IYA AG 
Sbjct: 663 LIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
            +++A IR+L++  G+ K PG SW+
Sbjct: 723 SDDSAQIRKLMRDKGIKKNPGYSWM 747



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 161/635 (25%), Positives = 301/635 (47%), Gaps = 59/635 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +S  Y  +L  FV +H S    P+ ++ +  + +C  L   +   QL     
Sbjct: 106 NTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQ 165

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +    VA  ++ ++     +    R+F  I+ P ++   + L    K   VD+A E
Sbjct: 166 KFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALE 225

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD MP+RD+  +N M++  +++G     + +  +M    VR D+ ++ S L+ C     
Sbjct: 226 LFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSS 285

Query: 204 LEFGRQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVVDACKVFEEAKG-----YVCDHI 257
           L +G+QLH+ V ++   C+   V +AL+ +Y  CG        F+EAKG     +  +++
Sbjct: 286 LRWGKQLHAQVIRN-LPCIDPYVASALVELYAKCG-------CFKEAKGVFNSLHDRNNV 337

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR----VGYQVHAQ 313
           ++ V++ G    G   E++  F  M    +   +    +++S C C R    +G Q+H+ 
Sbjct: 338 AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHSL 396

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGRS 372
            +KSG      VSN+ I+MY+ C  +  A  IF  + EKDIVSW +MI+ ++Q  N+ ++
Sbjct: 397 CLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKA 456

Query: 373 ----------------AIL-AYLE--------------MQSVGIRPDEFTFGSLL---AS 398
                           A+L AY++              +    +RPD  T+ +L    A 
Sbjct: 457 REFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCAD 516

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
            G  ++ + I       G+I +  V+NA+I+ Y+K  RI +A ++F  ++ ++I++WN +
Sbjct: 517 LGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAM 576

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NN 517
           I G+  +G   Q ++ F ++L    +PD  +    LS C+    ++ GK     + + +N
Sbjct: 577 ITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHN 636

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCF 576
           +   +   + M+ L  + G L  +  + + M  K T   W AL+SA   HG  + A    
Sbjct: 637 ISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAA 696

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           K + ++    PD  ++  +    + AG  DD  +I
Sbjct: 697 KHVFELD--SPDSGSYMLMAKIYADAGKSDDSAQI 729



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 4/171 (2%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S + ++  N  L    + G  +D L ++  + S   ++PD  +  T    CA+L     G
Sbjct: 464 STKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLG 523

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           +Q+    ++ GL     VAN ++++Y     ++  ++VF  +   D+ SW   ++  ++ 
Sbjct: 524 DQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQH 583

Query: 137 GHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           G    A E+FD +  R    D   Y A+++GC+ +G    G   F  M ++
Sbjct: 584 GMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRV 634


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 226/692 (32%), Positives = 350/692 (50%), Gaps = 47/692 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
             P    L   L  C + +N   G  LHA  L+ G  +  +V NT L+LY          
Sbjct: 7   FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLY---------- 56

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPVYNAMITGCTEN--- 167
                                 K  H+ +A  +FD + D  +D   +N++I   ++N   
Sbjct: 57  ---------------------AKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSS 95

Query: 168 GYEDIGIGLFREMHKLD-VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSV 225
                 I LFR M + + V  + ++ A V S   +   +  G+Q HS+  K+G S  V V
Sbjct: 96  SSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYV 155

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
            ++L+ MY   G V DA K+F+       + +S+  M+ G AS    ++A+  F  M   
Sbjct: 156 GSSLLNMYCKTGFVFDARKLFDRMPER--NTVSWATMISGYASSDIADKAVEVFELMRRE 213

Query: 286 SLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
               +E    SV+SA         G QVH+ A+K+G  A  SV+NA +TMY+ CG +D+A
Sbjct: 214 EEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDA 273

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGF 401
              F    +K+ ++W+ M++ YAQ      A+  + +M S G+ P EFT  G + A S  
Sbjct: 274 VRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDL 333

Query: 402 IEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
             +VE   +H+F F  G    + V +A++  YAK   +  A + F  +   +++ W ++I
Sbjct: 334 CAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSII 393

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            G++ NG    GL  + ++ M  + P+E T++  L +C+ +++L  GKQ+H  ++K    
Sbjct: 394 TGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFK 453

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            ++ +G+A+  +Y KCG LD    +F  M  +D ISWNA+IS  +Q+G G +A+  F+ M
Sbjct: 454 LEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKM 513

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
              G IKPD  TF  +LSACSH GLVD G   F  M +++   P  +H +CM+D+L RAG
Sbjct: 514 LLEG-IKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAG 572

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
            L+EA+  I S  +      W  L  AC  H N  LG      L+E    + S YVLLS+
Sbjct: 573 KLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSS 632

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IY A G  E    +R ++K  GV K+PGCSWI
Sbjct: 633 IYTALGDRENVERVRRIMKARGVNKEPGCSWI 664



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/585 (26%), Positives = 281/585 (48%), Gaps = 52/585 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A+ LF ++  ++ + P+ ++L+   +A +NL +   G Q H+ A++ G     +V +++L
Sbjct: 101 AISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLL 160

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y     +   +++F  +   +  SW T +S        D A EVF+ M          
Sbjct: 161 NMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRRE------- 213

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSG 218
                     E+I              ++ ++  SVLS   + +  + GRQ+HSL  K+G
Sbjct: 214 ----------EEI--------------QNEFALTSVLSALTSDVFVYTGRQVHSLAIKNG 249

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
              +VSV NAL+TMY  CG++ DA + FE +     + I+++ M+ G A  G  ++AL  
Sbjct: 250 LLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDK--NSITWSAMVTGYAQGGDSDKALKL 307

Query: 279 FRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F  M  + + PSE T V V++AC  LC  V G Q+H+ A K GF     V +A + MY+ 
Sbjct: 308 FNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAK 367

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG + +A   F  +Q+ D+V W ++I+ Y Q       +  Y +MQ   + P+E T  S+
Sbjct: 368 CGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASV 427

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L   +S   ++  + +HA +   G    + + +AL + Y K   +   Y IF  M  R++
Sbjct: 428 LRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDV 487

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           I+WN +I+G   NG   + L+ F ++L+  ++PD  T    LS+C+ +  +  G +    
Sbjct: 488 ISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKM 547

Query: 513 VLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMMIEKDTIS-----WNALISAYAQH 566
           +     I+ M    A M+ + ++ G L+ +       IE  T+      W  L+ A   H
Sbjct: 548 MFDEFNIAPMVEHYACMVDILSRAGKLNEA----KEFIESATVDHGLCLWRILLGACKNH 603

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              +  V   + + ++G   P+ + +  + S  +  G  ++  R+
Sbjct: 604 RNYELGVYAGEKLVELG--SPESSAYVLLSSIYTALGDRENVERV 646


>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 698

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 211/668 (31%), Positives = 349/668 (52%), Gaps = 56/668 (8%)

Query: 80  HAYALRAGLKAYPHVANTILSLYK-NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           HA  L++G+ + P   N +L+ Y  ++  L + +R+F EI   D  SW + L+A   +G 
Sbjct: 23  HATLLKSGVTS-PTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSIGA 81

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-S 197
              AC                                L R MH+  +  + ++  S L S
Sbjct: 82  HPAACR-------------------------------LLRAMHERGLAANTFALGSALRS 110

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
               G    G QLHSL  K+G +  V    AL+ MY  CG   DAC++F+       + +
Sbjct: 111 AAAMGCSALGTQLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPER--NTV 168

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-----SACLCPRVGYQVHA 312
           S+N ++ G    G+V  A+  F +M      P E TF +++     S C    + +Q+H 
Sbjct: 169 SWNALVAGYVESGKVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCF---LMHQLHG 225

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGR 371
           + +K G      V NAAIT YS CG +  +  IF  + ++ D++SWN M+  YA   +  
Sbjct: 226 KIVKYGSALGLIVLNAAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEH 285

Query: 372 SAILAYLE-MQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNA 426
            A+  +   M++ G++PD ++F S++  S   E  +    +IH  V  NG      V NA
Sbjct: 286 EAMRFFASMMRASGVQPDMYSFTSII--SACAEHRDHGGTVIHGLVSKNGFEGVTHVCNA 343

Query: 427 LISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           LI+ Y +   N  ++ AY+ F ++  ++ ++WN+++ G+  +G     L+ F  +    +
Sbjct: 344 LIAMYTRFSENCMMEDAYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENI 403

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
             DEY  S AL SC+ ++ LR G+QIHG V+++   S   + +++I +Y+K G LD +++
Sbjct: 404 TTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMK 463

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F    +  ++ WN+++  YAQHG+ +   S F  M ++ ++  D  TF  +++ACSHAG
Sbjct: 464 SFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLEL-KVPLDHITFVGLITACSHAG 522

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+G+ I ++M + YG     +H +C +DL GRAG LD+A+ +I+S   +  +  W  L
Sbjct: 523 LVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTL 582

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             AC  HGN+ L   +A  LLE E  + S YVLLSN+Y+  G+W + A +++ +K  G+ 
Sbjct: 583 LGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLS 642

Query: 724 KQPGCSWI 731
           K PG SWI
Sbjct: 643 KVPGWSWI 650



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 166/583 (28%), Positives = 270/583 (46%), Gaps = 66/583 (11%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   I      S   LL  ++S+      G +  A  L   +H    L  + ++L + 
Sbjct: 55  RRLFDEIPRLDAASWNSLLAAHVSI------GAHPAACRLLRAMHE-RGLAANTFALGSA 107

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L + A +  +A G QLH+ A++AGL                                 +V
Sbjct: 108 LRSAAAMGCSALGTQLHSLAVKAGLA-------------------------------DNV 136

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +S T  L    K G    AC +FD MP+R+   +NA++ G  E+G     + LF EM + 
Sbjct: 137 FSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMERE 196

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
               D  +FA++L+V +        QLH  + K G +  + V+NA IT Y  CG + ++ 
Sbjct: 197 GFLPDEATFAALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSR 256

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACL 302
           ++F+E  G   D IS+N M+   A+ G   EA+  F  M+ AS ++P   +F S++SAC 
Sbjct: 257 RIFDEI-GDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISACA 315

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI------FARLQEKDI 354
             R   G  +H    K+GFE  T V NA I MY+   +  E CM+      F  L  KD 
Sbjct: 316 EHRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYT---RFSENCMMEDAYKCFDSLLLKDT 372

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAF 411
           VSWN+M++ Y+Q  L   A+  +  MQS  I  DE+ F + L S   + ++ +   IH  
Sbjct: 373 VSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGL 432

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V  +G  +N  VS++LI  Y+K+  +  A + F      + + WN+++ G+  +G     
Sbjct: 433 VIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAV 492

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM--- 528
              F+++L  ++  D  T    +++C+    +  G +I      N + S+  +   M   
Sbjct: 493 RSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEI-----LNTMESRYGIPLRMEHY 547

Query: 529 ---ITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
              I LY + G LD +  + + M  E D + W  L+ A   HG
Sbjct: 548 ACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHG 590



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 9/318 (2%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYS-SCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           + HA  +KSG  + T   N  +T YS S   +  A  +F  +   D  SWN++++ +   
Sbjct: 21  KSHATLLKSGVTSPTPW-NQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLAAHVSI 79

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVS 424
               +A      M   G+  + F  GS L S+   G   +   +H+     G+  N+  +
Sbjct: 80  GAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLADNVFSA 139

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            AL+  YAK  R + A ++F  M  RN ++WN L+ G++ +G     +Q F E+      
Sbjct: 140 TALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEMEREGFL 199

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PDE T + AL +    S+     Q+HG ++K      + + NA IT Y++CG L  S R+
Sbjct: 200 PDEATFA-ALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYSQCGALANSRRI 258

Query: 545 FNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           F+ + ++ D ISWNA++ AYA HG   EA+  F +M     ++PD  +FT+++SAC  A 
Sbjct: 259 FDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSFTSIISAC--AE 316

Query: 604 LVDDGTRIFDSMVNDYGF 621
             D G  +   +V+  GF
Sbjct: 317 HRDHGGTVIHGLVSKNGF 334



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 17/310 (5%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYA-KNERIKQAYQIFHNMSPRNIITWNTLIN 460
           I  V   HA +  +G+ T+    N L++AY+  +  +  A ++F  +   +  +WN+L+ 
Sbjct: 16  IAAVAKSHATLLKSGV-TSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAASWNSLLA 74

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
             +  G      +    +    L  + + L  AL S A +     G Q+H   +K  L  
Sbjct: 75  AHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAVKAGLAD 134

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            +    A++ +YAKCG    + R+F+ M E++T+SWNAL++ Y + G+   AV  F  M+
Sbjct: 135 NVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQLFVEME 194

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGT----RIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             G + PD+ATF A+L+      +V+D T          +  YG       L+  +    
Sbjct: 195 REGFL-PDEATFAALLT------VVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAYS 247

Query: 637 RAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           + G L  + R+ +   I  RSD  +W A+  A A HG           ++     +P +Y
Sbjct: 248 QCGALANSRRIFDE--IGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMY 305

Query: 695 VLLSNIYAAA 704
              S I A A
Sbjct: 306 SFTSIISACA 315


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 325/587 (55%), Gaps = 10/587 (1%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCD 200
           A ++FD+M   D  ++N MI G T  G     +  +  M    V+ D +++  V+ SV  
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
              LE G+++H++V K GF   V V N+LI++Y   G   DA KVFEE      D +S+N
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER--DIVSWN 200

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            M+ G  ++G    +L+ F++ML    +P   + +S + AC     P++G ++H  A++S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260

Query: 318 GFE-AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
             E     V  + + MYS  G++  A  IF  + +++IV+WN MI  YA+      A L 
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320

Query: 377 YLEM-QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           + +M +  G++PD  T  +LL +S  +E    IH +    G + ++ +  ALI  Y +  
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASAILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECG 379

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           ++K A  IF  M+ +N+I+WN++I  ++ NG     L+ F EL  S L PD  T++  L 
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           + A   SL  G++IH Y++K+   S   + N+++ +YA CGDL+ + + FN ++ KD +S
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WN++I AYA HG G+ +V  F  M    R+ P+++TF ++L+ACS +G+VD+G   F+SM
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             +YG  P  +H  CMLDL+GR G    A+R +        +  W +L +A   H ++ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
               A  + + E D    YVLL N+YA AG WE+   I+ L++  G+
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 283/596 (47%), Gaps = 47/596 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   +  G Y +A+  + ++  +  +K D ++    + + A + +   G ++HA  +
Sbjct: 99  NVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +  +V N+++SLY                                K+G    A +
Sbjct: 158 KLGFVSDVYVCNSLISLY-------------------------------MKLGCAWDAEK 186

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF++MP+RD+  +N+MI+G    G     + LF+EM K   + D +S  S L  C     
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246

Query: 204 LEFGRQLHSLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNV 261
            + G+++H    +S      V V+ +++ MY   G V  A ++F    G +  +I ++NV
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF---NGMIQRNIVAWNV 303

Query: 262 MMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFE 320
           M+   A  GRV +A + F+ M   + L+P  +T ++++ A      G  +H  AM+ GF 
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFL 362

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            +  +  A I MY  CG++  A +IF R+ EK+++SWN++I+ Y Q     SA+  + E+
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               + PD  T  S+L   A S  +     IHA++  +   +N  + N+L+  YA    +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A + F+++  +++++WN++I  + ++GF    +  FSE++ S + P++ T +  L++C
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542

Query: 498 ARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           +    +  G +    + +   I   +     M+ L  + G+   + R    M    T   
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           W +L++A   H +    ++ F A Q       +   +  +L+  + AG  +D  RI
Sbjct: 603 WGSLLNASRNHKD--ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 7/256 (2%)

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  +A +  ++ A Q+F  M+  +   WN +I GF   G  ++ +Q +S ++ + ++ D 
Sbjct: 71  LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    + S A ISSL  GK+IH  V+K   +S + + N++I+LY K G    + +VF  
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M E+D +SWN++IS Y   G+G  ++  FK M   G  KPD+ +  + L ACSH      
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKM 249

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G  I    V           ++ +LD+  + G +  AER+ N   IQ R+   W +   C
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQ-RNIVAWNVMIGC 307

Query: 668 AAHGNLRLGRIIAGLL 683
            A    R GR+    L
Sbjct: 308 YA----RNGRVTDAFL 319


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 228/707 (32%), Positives = 347/707 (49%), Gaps = 50/707 (7%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y++A+ LFV++  +  L P+  ++   L AC  +     G ++H Y LR GL        
Sbjct: 142 YKEAVLLFVEMKKA-GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           T L  +    D V   RVFS +   ++ SW                              
Sbjct: 201 TALVGFYMRFDAVLSHRVFSLMLVRNIVSW------------------------------ 230

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            NA+ITG    G     + L+  M    ++ D  +   V+  C + G L  G QLH L  
Sbjct: 231 -NAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 289

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K      + ++NAL+ MY + G++  +  +F        D   +N M+      G   EA
Sbjct: 290 KFNLINDLFILNALLNMYSDNGSLESSWALFNAVP--TSDAALWNSMISSYIGFGFHAEA 347

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV------GYQVHAQAMKSGFEAYTSVSNAA 329
           +  F  M +  ++    T   ++S  LC  +      G  +HA AMKSG E    + NA 
Sbjct: 348 IALFIKMRLERIKEDVRTIAIMLS--LCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNAL 405

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           ++MY    +I  A  +F +++  D++SWNTMIS +AQ      A   +L M    I+ + 
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465

Query: 390 FTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           +T  SLLA       +     IH F   NG+  N  ++ +L   Y      + A  +F  
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
              R++++WN+LI+ ++ N    + L  F+ ++ SEL P+  T+   L+SC +++ L  G
Sbjct: 526 CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLG 584

Query: 507 KQIHGYVLKNNLISKM--SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           + +H Y  +  +  +M  SL NA IT+YA+CG L  + ++F  +  +  +SWNA+I+ Y 
Sbjct: 585 QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYG 644

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG G++A   F  M D G  KP+  +F +VLSACSH+GL   G ++F SMV D+G  P 
Sbjct: 645 MHGRGRDATLAFAQMLDDG-FKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQ 703

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H  CM+DLLGR G+  EA   INS  I+  +  W AL S+C    N +L   I G L+
Sbjct: 704 LTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLV 763

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E E   P  ++LLSNIYAAAGLW E   IR+ L+  G+ K PG SWI
Sbjct: 764 ELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 178/343 (51%), Gaps = 16/343 (4%)

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQVHAQAMKSGFEAYTSV--SNAAITM 332
           L  +  M    + P   T   V+ AC     +G  V   +   G +    V    A +  
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDF 104

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  CG + EA  +F  + E+D+VSWN +IS Y      + A+L ++EM+  G+ P+  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 393 GSLLASSGFIEMVEM-----IHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHN 446
            +LL + G  EM+E+     IH +   NG+   +  V  AL+  Y + + +  ++++F  
Sbjct: 165 VALLLACG--EMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSL 221

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RNI++WN +I GFL  G   + L+ +S +L+  ++ D  T+ V + +CA    LR G
Sbjct: 222 MLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
            Q+H   +K NLI+ + + NA++ +Y+  G L+ S  +FN +   D   WN++IS+Y   
Sbjct: 282 MQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGF 341

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           G   EA++ F  M+ + RIK D  T   +LS C+    ++DG+
Sbjct: 342 GFHAEAIALFIKMR-LERIKEDVRTIAIMLSLCND---LNDGS 380



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 210/425 (49%), Gaps = 48/425 (11%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA-FGNQLHAYALRAGLKAYPH 93
           G + +A+ LF+++    ++K D+ +++  L+ C +L + + +G  LHA+A+++G++   +
Sbjct: 342 GFHAEAIALFIKMRL-ERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAY 400

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N +LS+Y     + + + VF +++  DV SW T +SA        +A  +F       
Sbjct: 401 LGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISA--------FAQSMFRA----- 447

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                          +E     LF  M + +++ ++Y+  S+L+ C D   L FGR +H 
Sbjct: 448 -------------KAFE-----LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
              K+G     S+  +L  MY NCG+   A  +F        D +S+N ++         
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR--DLVSWNSLISSYIKNDNA 547

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKS--GFEAYTSVS 326
            +AL+ F  M ++ L P+ +T ++++++C      P +G  +HA   +     E   S++
Sbjct: 548 GKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLP-LGQCLHAYTTRREVSLEMDASLA 605

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ITMY+ CGK+  A  IF  LQ + IVSWN MI+ Y     GR A LA+ +M   G +
Sbjct: 606 NAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFK 665

Query: 387 PDEFTFGSLLAS---SGF-IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  +F S+L++   SG  +  +++ H+ V   GI   +     ++    +     +A  
Sbjct: 666 PNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIA 725

Query: 443 IFHNM 447
             ++M
Sbjct: 726 FINSM 730



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 161/303 (53%), Gaps = 17/303 (5%)

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF 413
           WN++I  + +     + +  Y +M+S+GI PD  T   +L + G +  +     IH+F+ 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +I +++V  AL+  Y K   + +A ++F  M  R++++WN LI+G++      + + 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITLY 532
            F E+  + L P+  T+   L +C  +  LR G++IHGY L+N L    + +G A++  Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            +  D   S RVF++M+ ++ +SWNA+I+ +   G+  +A+  + +M   G IK D  T 
Sbjct: 208 MRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG-IKFDAVTM 265

Query: 593 TAVLSACSHAGLVDDGTRIFD-----SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
             V+ AC+  G +  G ++       +++ND  FI     L+ +L++    G L+ +  +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDL-FI-----LNALLNMYSDNGSLESSWAL 319

Query: 648 INS 650
            N+
Sbjct: 320 FNA 322


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 221/736 (30%), Positives = 366/736 (49%), Gaps = 52/736 (7%)

Query: 16  TSKELLLKL----NISLAN-----LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA 66
           +SK L  K+    ++S AN      +  G + DA+ +++++        +       + A
Sbjct: 59  SSKPLSTKIQTFVSVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA 118

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
              L +   G Q+H + L+ G+     V N++L++Y                       W
Sbjct: 119 FGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMY-----------------------W 155

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDV 185
                   K G V+ A ++F+KMP+ DL  +N MI+G  ++      +  FR M  +  +
Sbjct: 156 --------KCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGI 207

Query: 186 RRDNYS-FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             +  +  +S+LS      L  GR++H +V KSG      +V++LI MY  CG++ +A  
Sbjct: 208 YPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAEN 267

Query: 245 VFE---EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +F    +      + + +NVM+ G  S G   +AL+ F  M+V  ++P   T VS+ S C
Sbjct: 268 IFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLC 327

Query: 302 ---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              L    G Q+H    K G +    V  A + MY  CG +     IF R Q  +++ W+
Sbjct: 328 SESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWS 387

Query: 359 TMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVE--MIHAFVFIN 415
            +IS  AQ      A+  + E +   G+         L A S      E   IH      
Sbjct: 388 AVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKM 447

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G ++++ V +AL+  YAK   +  + ++F  +S +++++WN LI+G+  +    + L+ F
Sbjct: 448 GFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAF 507

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++ + E+RP+  T++  LS CA +S +   K++HGY+++  L S + + N++I  YAKC
Sbjct: 508 RDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKC 567

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           GD++ SL  F  M E++ +SWN++I     H    E +  F  M   G IKPD  TFTA+
Sbjct: 568 GDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASG-IKPDHVTFTAI 626

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSHAG VD+G + F SMV D+   P  +  +CM+DLLGRAG+L++A  +I +     
Sbjct: 627 LSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTP 686

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W +L  +C  HG+  L  I+A  + +         VLL+N+Y   G   E + +R 
Sbjct: 687 DDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRS 746

Query: 716 LLKRTGVIKQPGCSWI 731
            +K  G+ K+PGCSWI
Sbjct: 747 EIKDMGLKKKPGCSWI 762


>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/615 (32%), Positives = 342/615 (55%), Gaps = 46/615 (7%)

Query: 19  ELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           EL +K ++S    +++ S++G  ++A+ LF ++H S  L P  Y  S+ L+ACA +    
Sbjct: 249 ELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHIS-GLSPTPYVFSSVLSACAKIELFD 307

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G QLHA   + G     +V N +++LY    + +S ++VFS                  
Sbjct: 308 IGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFS------------------ 349

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                        K+  +D   YN++I+G ++ G  D  + LF++M    ++ D  + AS
Sbjct: 350 -------------KIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVAS 396

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +LS C +   L  G QLHS   K+G    + +  +L+ +Y  C ++  A K F  A    
Sbjct: 397 LLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFF--ATTQT 454

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            + + +NVM+     +  + ++   FR M +  L P++ T+ S++  C       +G Q+
Sbjct: 455 ENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQI 514

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+QA+K+GFE    V +  I MY+  GK+D A  I  RL E+D+VSW  +I+ Y Q +L 
Sbjct: 515 HSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLF 574

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A+  + EM + GI+ D   F S +++   I+ +   + IHA  +I+G   ++ + NAL
Sbjct: 575 TEALNLFDEMLNRGIQSDNIGFSSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNAL 634

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S YA+  RI++A   F  +  ++ I+WN L++GF  +G+  + L+ F+++  + ++   
Sbjct: 635 VSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTRANIKASL 694

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T   A+S+ A +++++ GKQIH  ++K    S++ + NA+ITLYAKCG +D + R F  
Sbjct: 695 FTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFFE 754

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + EK+ ISWNA+I+ Y+QHG G EAV+ F+ M+ VG  KP+  TF  V+SACSH GLV++
Sbjct: 755 IPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQVGA-KPNHVTFVGVISACSHVGLVNE 813

Query: 608 GTRIFDSMVNDYGFI 622
           G   F+SM  ++G I
Sbjct: 814 GLAYFESMSKEHGLI 828



 Score =  269 bits (688), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 198/662 (29%), Positives = 328/662 (49%), Gaps = 51/662 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG--NQ 78
           L+  N  L+ L  +      L LF Q+     + P+  ++++ L A  +  N AF    Q
Sbjct: 153 LMTWNKVLSGLVANKTSNRVLGLFAQM-VEENVNPNEVTVASVLRAYGS-GNVAFYYVEQ 210

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +HA  +  GL       N ++ LY                                K G 
Sbjct: 211 IHASIISRGLGTSSIACNPLIDLY-------------------------------AKNGF 239

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +  A +VFD++  +D   + A+I+  ++NG+ +  I LF EMH   +    Y F+SVLS 
Sbjct: 240 IRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSA 299

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C    L + G QLH+LV K GF     V NAL+T+Y   GN + A +VF + K    D +
Sbjct: 300 CAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCK--DEV 357

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SYN ++ GL+  G  + AL  F+ M +  L+P  +T  S++SAC   +    G Q+H+ A
Sbjct: 358 SYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYA 417

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGRSA 373
           +K+G      +  + + +Y  C  I  A   FA  Q +++V WN M+  Y Q  NL +S 
Sbjct: 418 IKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSF 477

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
            + + +MQ  G+ P++FT+ S+L    S G +++ E IH+     G   N+ V + LI  
Sbjct: 478 CI-FRQMQIEGLIPNQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDM 536

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK  ++  A  I   ++  ++++W  LI G+  +    + L  F E+L   ++ D    
Sbjct: 537 YAKLGKLDIARGILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGF 596

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S A+S+CA I +L  G+QIH     +     +S+GNA+++LYA+CG +  +   F  +  
Sbjct: 597 SSAISACAGIQALSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDA 656

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           KD+ISWNAL+S +AQ G  +EA+  F  M     IK    TF + +SA ++   +  G +
Sbjct: 657 KDSISWNALMSGFAQSGYCEEALKIFAQMTR-ANIKASLFTFGSAVSAAANMANIKQGKQ 715

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAA 669
           I  +M+   GF    +  + ++ L  + G +D A+R      I  +++ +W A+ +  + 
Sbjct: 716 I-HAMIMKTGFDSEIEVSNALITLYAKCGCIDGAKREFF--EIPEKNEISWNAMITGYSQ 772

Query: 670 HG 671
           HG
Sbjct: 773 HG 774



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 174/604 (28%), Positives = 299/604 (49%), Gaps = 32/604 (5%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
           +G ++   +VFD MP R L  +N +++G   N   +  +GLF +M + +V  +  + ASV
Sbjct: 135 VGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASV 194

Query: 196 LSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L    +G + F    Q+H+ +   G        N LI +Y   G +  A KVF+E    +
Sbjct: 195 LRAYGSGNVAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDE----L 250

Query: 254 C--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGY 308
           C  D +S+  ++   +  G  EEA+  F +M ++ L P+   F SV+SAC       +G 
Sbjct: 251 CMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIELFDIGE 310

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA   K GF   T V NA +T+YS  G    A  +F++++ KD VS+N++IS  +Q+ 
Sbjct: 311 QLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLISGLSQQG 370

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSN 425
               A+  + +MQ   ++PD  T  SLL++   I+ +   E +H++    G+  +I +  
Sbjct: 371 CSDRALELFKKMQLDHLKPDCVTVASLLSACASIKSLSKGEQLHSYAIKAGMCLDIIIEG 430

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +L+  Y K   I  A++ F      N++ WN ++  +       +    F ++ +  L P
Sbjct: 431 SLLDLYVKCSDITTAHKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIP 490

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +++T    L +C    +L  G+QIH   +K      + + + +I +YAK G LD +  + 
Sbjct: 491 NQFTYPSILRTCTSFGALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGIL 550

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             + E+D +SW ALI+ Y QH    EA++ F  M + G I+ D   F++ +SAC+    +
Sbjct: 551 RRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRG-IQSDNIGFSSAISACAGIQAL 609

Query: 606 DDGTRIF-DSMVNDYGFIPAEDHLS---CMLDLLGRAGYLDEAERVINSQHIQAR-SDNW 660
             G +I   S ++ Y    +ED LS    ++ L  R G + EA      + I A+ S +W
Sbjct: 610 SQGQQIHAQSYISGY----SED-LSIGNALVSLYARCGRIQEANLAF--EKIDAKDSISW 662

Query: 661 WALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGL--WEEAANIRELL 717
            AL S  A  G      +I A   + R   K S++   S + AAA +   ++   I  ++
Sbjct: 663 NALMSGFAQSGYCEEALKIFAQ--MTRANIKASLFTFGSAVSAAANMANIKQGKQIHAMI 720

Query: 718 KRTG 721
            +TG
Sbjct: 721 MKTG 724



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 162/307 (52%), Gaps = 5/307 (1%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           ++H++ +K GF+  + + +  I  Y + G ++    +F  +  + +++WN ++S      
Sbjct: 108 KLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVANK 167

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFVFINGIITNIQVS 424
                +  + +M    + P+E T  S+L + G        VE IHA +   G+ T+    
Sbjct: 168 TSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGNVAFYYVEQIHASIISRGLGTSSIAC 227

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N LI  YAKN  I+ A ++F  +  ++ ++W  +I+ +  NGF  + ++ F E+ +S L 
Sbjct: 228 NPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLS 287

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P  Y  S  LS+CA+I     G+Q+H  V K     +  + NA++TLY++ G+   + +V
Sbjct: 288 PTPYVFSSVLSACAKIELFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQV 347

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ +  KD +S+N+LIS  +Q G    A+  FK MQ +  +KPD  T  ++LSAC+    
Sbjct: 348 FSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQ-LDHLKPDCVTVASLLSACASIKS 406

Query: 605 VDDGTRI 611
           +  G ++
Sbjct: 407 LSKGEQL 413



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 91/215 (42%), Gaps = 7/215 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  C   +S    K++H  +LK     +  L + +I  Y   GDL+  ++VF+ M  +  
Sbjct: 94  LDFCLNSASFLDCKKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSL 153

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           ++WN ++S    +      +  F  M +   + P++ T  +VL A     +         
Sbjct: 154 MTWNKVLSGLVANKTSNRVLGLFAQMVE-ENVNPNEVTVASVLRAYGSGNVAFYYVEQIH 212

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           + +   G   +    + ++DL  + G++  A +V +   ++  S +W A+ S+ + +G  
Sbjct: 213 ASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMK-DSVSWVAVISSYSQNG-- 269

Query: 674 RLGRIIAGLLLEREQD--KPSVYVLLSNIYAAAGL 706
             G     L  E       P+ YV  S + A A +
Sbjct: 270 -FGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKI 303


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 228/707 (32%), Positives = 347/707 (49%), Gaps = 50/707 (7%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y++A+ LFV++  +  L P+  ++   L AC  +     G ++H Y LR GL        
Sbjct: 142 YKEAVLLFVEMKKA-GLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVG 200

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           T L  +    D V   RVFS +   ++ SW                              
Sbjct: 201 TALVGFYMRFDAVLSHRVFSLMLVRNIVSW------------------------------ 230

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            NA+ITG    G     + L+  M    ++ D  +   V+  C + G L  G QLH L  
Sbjct: 231 -NAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAI 289

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K      + ++NAL+ MY + G++  +  +F        D   +N M+      G   EA
Sbjct: 290 KFNLINDLFILNALLNMYSDNGSLESSWALFNAVP--TSDAALWNSMISSYIGFGFHAEA 347

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV------GYQVHAQAMKSGFEAYTSVSNAA 329
           +  F  M +  ++    T   ++S  LC  +      G  +HA AMKSG E    + NA 
Sbjct: 348 IALFIKMRLERIKEDVRTIAIMLS--LCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNAL 405

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           ++MY    +I  A  +F +++  D++SWNTMIS +AQ      A   +L M    I+ + 
Sbjct: 406 LSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465

Query: 390 FTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           +T  SLLA       +     IH F   NG+  N  ++ +L   Y      + A  +F  
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
              R++++WN+LI+ ++ N    + L  F+ ++ SEL P+  T+   L+SC +++ L  G
Sbjct: 526 CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI-SELEPNSVTIINILTSCTQLAHLPLG 584

Query: 507 KQIHGYVLKNNLISKM--SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           + +H Y  +  +  +M  SL NA IT+YA+CG L  + ++F  +  +  +SWNA+I+ Y 
Sbjct: 585 QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYG 644

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG G++A   F  M D G  KP+  +F +VLSACSH+GL   G ++F SMV D+G  P 
Sbjct: 645 MHGRGRDATLAFAQMLDDG-FKPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQ 703

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H  CM+DLLGR G+  EA   INS  I+  +  W AL S+C    N +L   I G L+
Sbjct: 704 LTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLV 763

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E E   P  ++LLSNIYAAAGLW E   IR+ L+  G+ K PG SWI
Sbjct: 764 ELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTSWI 810



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/638 (26%), Positives = 295/638 (46%), Gaps = 59/638 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + PD  ++   L AC  L   A GN +  ++   GL                  DL++  
Sbjct: 56  ITPDSATMPLVLKACGRLN--AIGNGVRIHSCIRGL------------------DLIN-- 93

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                    DV   T  +    K G V  A +VF +MP+RDL  +NA+I+G         
Sbjct: 94  ---------DVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKE 144

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF EM K  +  ++ +  ++L  C   L L  G+++H    ++G   + + V   + 
Sbjct: 145 AVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALV 204

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            ++   + V + +VF      V + +S+N ++ G  +VG   +AL  +  ML+  ++   
Sbjct: 205 GFYMRFDAVLSHRVFSLM--LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDA 262

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T + V+ AC    C R+G Q+H  A+K        + NA + MYS  G ++ +  +F  
Sbjct: 263 VTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNA 322

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
           +   D   WN+MIS+Y        AI  +++M+   I+ D  T   +L+    +    + 
Sbjct: 323 VPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIW 382

Query: 408 ---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              +HA    +GI  +  + NAL+S Y K+ +I  A  +F  M   ++I+WNT+I+ F  
Sbjct: 383 GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ 442

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           + F  +  + F  +  SE++ + YT+   L+ C   S L  G+ IHG+ +KN L    SL
Sbjct: 443 SMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSL 502

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             ++  +Y  CGD   +  +F    ++D +SWN+LIS+Y ++    +A+  F  M  +  
Sbjct: 503 NTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM--ISE 560

Query: 585 IKPDQATFTAVLSACSHAGLVDDG-------TRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
           ++P+  T   +L++C+    +  G       TR   S+  D     A       + +  R
Sbjct: 561 LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANA------FITMYAR 614

Query: 638 AGYLDEAERVINSQHIQARSD-NWWALFSACAAHGNLR 674
            G L  AE++  +  +Q RS  +W A+ +    HG  R
Sbjct: 615 CGKLQYAEKIFCT--LQTRSIVSWNAMITGYGMHGRGR 650



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 178/343 (51%), Gaps = 16/343 (4%)

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQVHAQAMKSGFEAYTSV--SNAAITM 332
           L  +  M    + P   T   V+ AC     +G  V   +   G +    V    A +  
Sbjct: 45  LSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDF 104

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  CG + EA  +F  + E+D+VSWN +IS Y      + A+L ++EM+  G+ P+  T 
Sbjct: 105 YCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTV 164

Query: 393 GSLLASSGFIEMVEM-----IHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHN 446
            +LL + G  EM+E+     IH +   NG+   +  V  AL+  Y + + +  ++++F  
Sbjct: 165 VALLLACG--EMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHRVFSL 221

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RNI++WN +I GFL  G   + L+ +S +L+  ++ D  T+ V + +CA    LR G
Sbjct: 222 MLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLG 281

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
            Q+H   +K NLI+ + + NA++ +Y+  G L+ S  +FN +   D   WN++IS+Y   
Sbjct: 282 MQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGF 341

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           G   EA++ F  M+ + RIK D  T   +LS C+    ++DG+
Sbjct: 342 GFHAEAIALFIKMR-LERIKEDVRTIAIMLSLCND---LNDGS 380



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 210/425 (49%), Gaps = 48/425 (11%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA-FGNQLHAYALRAGLKAYPH 93
           G + +A+ LF+++    ++K D+ +++  L+ C +L + + +G  LHA+A+++G++   +
Sbjct: 342 GFHAEAIALFIKMRL-ERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAY 400

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N +LS+Y     + + + VF +++  DV SW T +SA        +A  +F       
Sbjct: 401 LGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISA--------FAQSMFRA----- 447

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                          +E     LF  M + +++ ++Y+  S+L+ C D   L FGR +H 
Sbjct: 448 -------------KAFE-----LFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHG 489

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
              K+G     S+  +L  MY NCG+   A  +F        D +S+N ++         
Sbjct: 490 FAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR--DLVSWNSLISSYIKNDNA 547

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKS--GFEAYTSVS 326
            +AL+ F  M ++ L P+ +T ++++++C      P +G  +HA   +     E   S++
Sbjct: 548 GKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLP-LGQCLHAYTTRREVSLEMDASLA 605

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ITMY+ CGK+  A  IF  LQ + IVSWN MI+ Y     GR A LA+ +M   G +
Sbjct: 606 NAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFK 665

Query: 387 PDEFTFGSLLAS---SGF-IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  +F S+L++   SG  +  +++ H+ V   GI   +     ++    +     +A  
Sbjct: 666 PNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIA 725

Query: 443 IFHNM 447
             ++M
Sbjct: 726 FINSM 730



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 160/303 (52%), Gaps = 17/303 (5%)

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF 413
           WN++I  + +     + +  Y +M+S+GI PD  T   +L + G +  +     IH+ + 
Sbjct: 28  WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +I +++V  AL+  Y K   + +A ++F  M  R++++WN LI+G++      + + 
Sbjct: 88  GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITLY 532
            F E+  + L P+  T+   L +C  +  LR G++IHGY L+N L    + +G A++  Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            +  D   S RVF++M+ ++ +SWNA+I+ +   G+  +A+  + +M   G IK D  T 
Sbjct: 208 MRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEG-IKFDAVTM 265

Query: 593 TAVLSACSHAGLVDDGTRIFD-----SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
             V+ AC+  G +  G ++       +++ND  FI     L+ +L++    G L+ +  +
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDL-FI-----LNALLNMYSDNGSLESSWAL 319

Query: 648 INS 650
            N+
Sbjct: 320 FNA 322


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 212/717 (29%), Positives = 364/717 (50%), Gaps = 44/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ LS+S +  +AL +F ++     ++PD  S+     A + L +      +H Y +
Sbjct: 197 NAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVV 256

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  +  +  V+N+++ +Y                               +K G V  A +
Sbjct: 257 RRCV--FGVVSNSLIDMY-------------------------------SKCGEVKLAHQ 283

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA-SVLSVCDAGL 203
           +FD+M  +D   +  M+ G   +G     + L  EM +  ++ +  S   SVL+  +   
Sbjct: 284 IFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRD 343

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+++H+   + G +  + V   +++MY  CG +  A + F   +G   D + ++  +
Sbjct: 344 LEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGR--DLVVWSAFL 401

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
             L   G   EAL  F++M    L+P +    S++SAC      R+G  +H   +K+   
Sbjct: 402 SALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMG 461

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV+   ++MY+ C     A  +F R+  KD+V+WNT+I+ + +    R A+  +L +
Sbjct: 462 SDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRL 521

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G++PD  T  SLL++   ++ + +    H  +  NGI + + V  ALI  YAK   +
Sbjct: 522 QLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSL 581

Query: 438 KQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             A  +FH N   ++ ++WN +I G+L NG   + +  F+++ +  +RP+  T    L +
Sbjct: 582 CTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPA 641

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + +S LR     H  +++   IS   +GN++I +YAK G L  S + F+ M  K TISW
Sbjct: 642 VSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISW 701

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA++S YA HG+G+ A++ F  MQ+   +  D  ++ +VLSAC HAGL+ +G  IF SM 
Sbjct: 702 NAMLSGYAMHGQGEVALALFSLMQET-HVPVDSVSYISVLSACRHAGLIQEGRNIFQSMT 760

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             +   P+ +H +CM+DLLG AG  DE   +I+    +  +  W AL  AC  H N++LG
Sbjct: 761 EKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLG 820

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
            I    LL+ E      Y++LS+IYA  G W +A   R  +   G+ K PG SW+G+
Sbjct: 821 EIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWVGA 877



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 203/716 (28%), Positives = 357/716 (49%), Gaps = 52/716 (7%)

Query: 9   TIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA 68
           T+A NS T+  L+L  N  +   SR   +Q+A+  + Q  S   L+PD Y+ +  L AC 
Sbjct: 81  TLAPNSITNPSLIL-WNSLIRAYSRLHLFQEAIKSY-QTMSYMGLEPDKYTFTFVLKACT 138

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
                       A     G+  +  +A         +R+L             DV+  T 
Sbjct: 139 G-----------ALDFHEGVAIHQDIA---------SREL-----------ECDVFIGTG 167

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRR 187
            +    KMGH+D A +VFDKMP +D+  +NAMI+G +++      + +F+ M   + V  
Sbjct: 168 LVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEP 227

Query: 188 DNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKV 245
           D+ S  ++  +V     ++  + +H  V +    C+  VV N+LI MY  CG V  A ++
Sbjct: 228 DSVSILNLAPAVSRLEDVDSCKSIHGYVVR---RCVFGVVSNSLIDMYSKCGEVKLAHQI 284

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F++   +V D IS+  MM G    G   E L    +M    ++ ++++ V+ + A    R
Sbjct: 285 FDQM--WVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETR 342

Query: 306 ---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G +VH  A++ G  +   V+   ++MY+ CG++ +A   F  L+ +D+V W+  +S
Sbjct: 343 DLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLS 402

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIIT 419
              Q      A+  + EMQ  G++PD+    SL+++   I    + +M+H +V    + +
Sbjct: 403 ALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGS 462

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           +I V+  L+S Y + +    A  +F+ M  ++++ WNTLINGF   G P   L+ F  L 
Sbjct: 463 DISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQ 522

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           +S ++PD  T+   LS+CA +  L  G   HG ++KN + S+M +  A+I +YAKCG L 
Sbjct: 523 LSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLC 582

Query: 540 CSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
            +  +F++    KD +SWN +I+ Y  +G   EA+S F  M+ +  ++P+  TF  +L A
Sbjct: 583 TAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMK-LESVRPNLVTFVTILPA 641

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
            S+  ++ +    F + +   GFI +    + ++D+  ++G L  +E+  +    +  + 
Sbjct: 642 VSYLSILREAMA-FHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKG-TI 699

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAANI 713
           +W A+ S  A HG   +   +  L+ E      SV Y+ + +    AGL +E  NI
Sbjct: 700 SWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNI 755


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/615 (33%), Positives = 331/615 (53%), Gaps = 23/615 (3%)

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           C ++G   +A ++FD+MP+R++  +N++I+G T+ G+ +  + LF E  + +++ D +++
Sbjct: 95  CRELG---FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151

Query: 193 ASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           A  L  C     L+ G  LH LV  +G S  V ++N LI MY  CG +  A  +F+    
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV----- 306
              D +S+N ++ G   VG  EE L     M    L  +     SV+ AC C  +     
Sbjct: 212 R--DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC-CINLNEGFI 268

Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H    K G E    V  A + MY+  G + EA  +F+ +  K++V++N MIS +
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328

Query: 365 AQRN-----LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
            Q +         A   +++MQ  G+ P   TF  +L   +++  +E    IHA +  N 
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++  + +ALI  YA     +   Q F + S ++I +W ++I+  + N         F 
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +L  S +RP+EYT+S+ +S+CA  ++L  G+QI GY +K+ + +  S+  + I++YAK G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           ++  + +VF  +   D  +++A+IS+ AQHG   EA++ F++M+  G IKP+Q  F  VL
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG-IKPNQQAFLGVL 567

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            AC H GLV  G + F  M NDY   P E H +C++DLLGR G L +AE +I S   Q  
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              W AL S+C  + +  +G+ +A  L+E E +    YVLL NIY  +G+   A  +REL
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687

Query: 717 LKRTGVIKQPGCSWI 731
           ++  GV K+P  SWI
Sbjct: 688 MRDRGVKKEPALSWI 702



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 130/560 (23%), Positives = 243/560 (43%), Gaps = 53/560 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  ++ G Y+ A+ LF++   ++ LK D ++ +  L  C    +   G  LH
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLGELLH 171

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +  GL     + N ++ +Y                            S C   G +D
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMY----------------------------SKC---GKLD 200

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  +FD+  +RD   +N++I+G    G  +  + L  +MH+  +    Y+  SVL  C 
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260

Query: 200 ---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
              + G +E G  +H    K G    + V  AL+ MY   G++ +A K+F        + 
Sbjct: 261 INLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK--NV 318

Query: 257 ISYNVMMDGLASVGRV-----EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GY 308
           ++YN M+ G   +  +      EA   F DM    L PS  TF  V+ AC   +    G 
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA   K+ F++   + +A I +Y+  G  ++    FA   ++DI SW +MI  + Q  
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSN 425
              SA   + ++ S  IRP+E+T   ++++      +   E I  +   +GI     V  
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           + IS YAK+  +  A Q+F  +   ++ T++ +I+    +G   + L  F  +    ++P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDL-DCSL 542
           ++      L +C     +  G + +   +KN+  +         ++ L  + G L D   
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617

Query: 543 RVFNMMIEKDTISWNALISA 562
            + +   +   ++W AL+S+
Sbjct: 618 LILSSGFQDHPVTWRALLSS 637



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 205/445 (46%), Gaps = 46/445 (10%)

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G   H   +KS       + N  + MY  C ++  A  +F R+ E++I+S+N++IS Y 
Sbjct: 65  LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQ 422
           Q      A+  +LE +   ++ D+FT+   L   G    +++ E++H  V +NG+   + 
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           + N LI  Y+K  ++ QA  +F     R+ ++WN+LI+G++  G   + L   +++    
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244

Query: 483 LRPDEYTLSVALSSCA---RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           L    Y L   L +C        +  G  IH Y  K  +   + +  A++ +YAK G L 
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGE-----GKEAVSCFKAMQDVGRIKPDQATFTA 594
            ++++F++M  K+ +++NA+IS + Q  E       EA   F  MQ  G ++P  +TF+ 
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG-LEPSPSTFSV 363

Query: 595 VLSACSHAGLVDDGTRI--------FDS-------MVNDYGFI-PAEDHLSC-------- 630
           VL ACS A  ++ G +I        F S       ++  Y  +   ED + C        
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423

Query: 631 ------MLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
                 M+D   +   L+ A    R + S HI+        + SACA    L  G  I G
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483

Query: 682 LLLEREQDK-PSVYVLLSNIYAAAG 705
             ++   D   SV     ++YA +G
Sbjct: 484 YAIKSGIDAFTSVKTSSISMYAKSG 508



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 25/266 (9%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A SG + + ++ H  +  + +   + + N L++ Y K   +  A Q+F  M  RNII++N
Sbjct: 58  AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           +LI+G+   GF  Q ++ F E   + L+ D++T + AL  C     L  G+ +HG V+ N
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L  ++ L N +I +Y+KCG LD ++ +F+   E+D +SWN+LIS Y + G  +E ++  
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237

Query: 577 KAMQDVGRIKPDQATFTAVLSACS---HAGLVDDGTRI----------FDSMVNDYGFIP 623
             M   G +        +VL AC    + G ++ G  I          FD +V       
Sbjct: 238 AKMHRDG-LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR------ 290

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVIN 649
                + +LD+  + G L EA ++ +
Sbjct: 291 -----TALLDMYAKNGSLKEAIKLFS 311



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 2/159 (1%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D     +   + A+  S+  GK  HG+++K++L   + L N ++ +Y KC +L  + ++F
Sbjct: 46  DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + M E++ IS+N+LIS Y Q G  ++A+  F   ++   +K D+ T+   L  C     +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEARE-ANLKLDKFTYAGALGFCGERCDL 164

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           D G  +   +V   G       ++ ++D+  + G LD+A
Sbjct: 165 DLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 196/573 (34%), Positives = 321/573 (56%), Gaps = 39/573 (6%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEE 248
           ++ S+L  C +A  L   + LH+ + ++ F C  +S+ N L+++Y   G++V+A +VF+E
Sbjct: 66  TYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDE 125

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY 308
               V + +S+  M+   A     +EAL  F +M    ++P+  TF S++ AC    V  
Sbjct: 126 MP--VKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG 183

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           + H + +K GFE+   V N  + MY+  G I+ A  +F ++ ++D+VSWN MI+ Y Q  
Sbjct: 184 EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNG 243

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG-----------FIEMVE--MIHAFVFIN 415
           L   A+  + E+     + D  T+ +++A              F +M E  ++     I 
Sbjct: 244 LIEDALKLFQEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIA 299

Query: 416 GIITNIQVS-----------------NALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           G + N  V                  NA+IS +A+N ++++A ++F  M   N+++WN +
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAM 359

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I G+  NG     L+ F ++ M +++P+  T ++ L +CA ++ L  G + H  V+++  
Sbjct: 360 IAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGF 419

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S + +GN ++ +YAKCG ++ + +VF+ M ++D+ S +A+I  YA +G  KE++  F+ 
Sbjct: 420 QSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQ 479

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           MQ  G +KPD+ TF  VLSAC HAGLVD+G + FD M   Y   PA +H  CM+DLLGRA
Sbjct: 480 MQFTG-LKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRA 538

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G  DEA  +IN   I+  +D W +L SAC  H N+ LG  +A  L+      P+ YVLLS
Sbjct: 539 GCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLS 598

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           NIYAAAG W++  ++R  +K   V K+ GCSWI
Sbjct: 599 NIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 234/468 (50%), Gaps = 24/468 (5%)

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSG 318
           ++  L   GR+ EAL   +DM+   + P   T+ S++  CL  +       +HA  +++ 
Sbjct: 35  LVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQ 94

Query: 319 FEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           FE    S+ N  +++Y   G + EA  +F  +  K++VSW  MI+ YA+   G+ A+  +
Sbjct: 95  FECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFF 154

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
            EMQ VGI+P+ FTF S+L +   +E++   H  +   G  +N+ V N L+  YAK   I
Sbjct: 155 YEMQDVGIQPNHFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCI 214

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A ++F  M  R++++WN +I G++ NG     L+ F E+     + D  T +  ++  
Sbjct: 215 EFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI----PKRDVITWNTMMAGY 270

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A+   + +  ++   + + NL+S     N MI  Y + G +  + ++F +M E++ ISWN
Sbjct: 271 AQCGDVENAVELFEKMPEQNLVS----WNTMIAGYVQNGSVKEAFKLFQIMPERNVISWN 326

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+IS +AQ+G+ +EA+  FK M +   +     ++ A+++  S  G  ++  ++F  M  
Sbjct: 327 AVISGFAQNGQVEEALKLFKTMPECNVV-----SWNAMIAGYSQNGQAENALKLFGQM-Q 380

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLD---EAERVINSQHIQARSDNWWALFSACAAHGNLR 674
                P  +  + +L        L+   EA  V+     Q+       L    A  G++ 
Sbjct: 381 MVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIE 440

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
             R +   +  R+QD  S+  ++   YA  G  +E+  + E ++ TG+
Sbjct: 441 DARKVFDRM--RQQDSASLSAMIVG-YAINGCSKESLELFEQMQFTGL 485



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 152/608 (25%), Positives = 264/608 (43%), Gaps = 95/608 (15%)

Query: 6   ITATIAGNSNT--SKELLLKLNISLA-NLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           I   I   +NT  +KE   K N  L  +L + G  ++ALH+ +Q    + + P   +  +
Sbjct: 11  IAYRIKARTNTLKTKEGTGKGNDGLVKSLCKQGRLREALHI-LQDMVENGIWPHSSTYDS 69

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNP 121
            L  C N ++      LHA+ ++   +     + N ++S+Y     LV  +RVF      
Sbjct: 70  LLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVF------ 123

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                                    D+MP +++  + AMI     + +    +G F EM 
Sbjct: 124 -------------------------DEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQ 158

Query: 182 KLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM--------- 232
            + ++ ++++FAS+L  C    LE   + H  + K GF   V V N L+ M         
Sbjct: 159 DVGIQPNHFTFASILPACTD--LEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEF 216

Query: 233 ----------------------YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
                                 Y   G + DA K+F+E      D I++N MM G A  G
Sbjct: 217 ARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR--DVITWNTMMAGYAQCG 274

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS---- 326
            VE A+  F  M        E   VS  +       GY V   ++K  F+ +  +     
Sbjct: 275 DVENAVELFEKM-------PEQNLVSWNTMI----AGY-VQNGSVKEAFKLFQIMPERNV 322

Query: 327 ---NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
              NA I+ ++  G+++EA  +F  + E ++VSWN MI+ Y+Q     +A+  + +MQ V
Sbjct: 323 ISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMV 382

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++P+  TF  +L +   + ++E     H  V  +G  +++ V N L+  YAK   I+ A
Sbjct: 383 DMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDA 442

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F  M  ++  + + +I G+ +NG   + L+ F ++  + L+PD  T    LS+C   
Sbjct: 443 RKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA 502

Query: 501 SSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNA 558
             +  G+Q    + +  ++   M     MI L  + G  D +  + N M I+ D   W +
Sbjct: 503 GLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGS 562

Query: 559 LISAYAQH 566
           L+SA   H
Sbjct: 563 LLSACRTH 570


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/688 (30%), Positives = 355/688 (51%), Gaps = 45/688 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +K + ++  + L AC   ++   G Q+H   +  G  +   VAN+++ LY          
Sbjct: 6   IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILY---------- 55

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 K G    A  +FD +PDR +  +NA+ +    +     
Sbjct: 56  ---------------------AKCGGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGE 94

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALI 230
            + LF +M    +R + +S +S+++VC  GL +   GR++H  + K G+       NAL+
Sbjct: 95  AVSLFHDMVLSGIRPNEFSLSSMINVC-TGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153

Query: 231 TMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            MY   G + DA  VF+E AK    D +S+N ++ G         AL   R+M  + + P
Sbjct: 154 DMYAKVGILEDASSVFDEIAKP---DIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCP 210

Query: 290 SELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +  T  S + AC       +G Q+H+  +K    + + +    I MYS C  +D+A ++F
Sbjct: 211 NMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVF 270

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE--- 403
             + E+D+++WN +IS ++Q      A   +  M + GI  ++ T  ++L S   ++   
Sbjct: 271 KLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANY 330

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           M   IHA    +G   +  V N+LI  Y K   ++ A ++F      +++ + +L+  + 
Sbjct: 331 MCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYA 390

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            +G   + L+ + E+    ++PD +  S  L++CA +S+   GKQ+H ++LK   +S + 
Sbjct: 391 QDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIF 450

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
            GN+++ +YAKCG ++ +   F+ +  +  +SW+A+I   AQHG GKEA+  FK M  VG
Sbjct: 451 AGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVG 510

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            + P+  T  +VL AC+HAGLV +    F+SM   +G  P ++H +CM+DLLGRAG L+ 
Sbjct: 511 -VPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEA 569

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A  ++N    QA +  W AL  A   H N+ LG   A +LL  E +K   +VLL+NIYA+
Sbjct: 570 AMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYAS 629

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G+W++ A +R L+K   V K+PG SW+
Sbjct: 630 VGMWDKVARVRRLMKDGKVKKEPGMSWL 657



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/499 (26%), Positives = 246/499 (49%), Gaps = 12/499 (2%)

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           MH L ++ + ++F SVL  C     L  G+Q+H +V  +GF     V N+L+ +Y  CG 
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
             DA  +F+         +S+N +           EA+  F DM+++ +RP+E +  S++
Sbjct: 61  FGDARSLFDAIPDRSV--VSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMI 118

Query: 299 SAC--LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           + C  L   V G ++H   +K G+++    +NA + MY+  G +++A  +F  + + DIV
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
           SWN +I+          A+    EM   G+ P+ FT  S L   A     E+   +H+ +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
               + ++  +   LI  Y+K   +  A  +F  M  R++I WN +I+G   N    +  
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F  +    +  ++ TLS  L S A + +    +QIH   LK+       + N++I  Y
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTY 358

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            KCG ++ + RVF      D + + +L++AYAQ G+G+EA+  +  MQD G IKPD    
Sbjct: 359 GKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRG-IKPDSFVC 417

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
           +++L+AC+     + G ++   ++  +GF+      + ++++  + G +++A    +   
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476

Query: 653 IQARSDNWWALFSACAAHG 671
           ++    +W A+    A HG
Sbjct: 477 VRGIV-SWSAMIGGLAQHG 494


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 213/648 (32%), Positives = 346/648 (53%), Gaps = 32/648 (4%)

Query: 108  LVSVKRVFSEIQNP----DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
            LV ++++ + I+      D+Y  +  ++   + G +D A  +F +M DR+    N ++ G
Sbjct: 367  LVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVG 426

Query: 164  CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF---------GRQLHSLV 214
                   +    +F+EM  L V  ++ S   +LS       EF         G+++H+ +
Sbjct: 427  LARQHQGEEAAKVFKEMKDL-VEINSESLVVLLST----FTEFSNLKEGKRKGQEVHAYL 481

Query: 215  TKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             +SG     +S+ NAL+ MY  C  + +AC VF+       D +S+N M+ GL    R E
Sbjct: 482  FRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSK--DTVSWNSMISGLDHNERFE 539

Query: 274  EALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAI 330
            EA+  F  M    + PS  + +S +S+C       +G Q+H +  K G +   SVSNA +
Sbjct: 540  EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALL 599

Query: 331  TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDE 389
            T+Y+    I+E   +F ++ E D VSWN+ I   A+        L Y LEM   G RP+ 
Sbjct: 600  TLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNR 659

Query: 390  FTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
             TF ++LA   S   + +   IHA +    +  +  + NAL++ Y K E+++    IF  
Sbjct: 660  VTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSR 719

Query: 447  MSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            MS R + ++WN++I+G+L +G   + +     ++    + D +T +  LS+CA +++L  
Sbjct: 720  MSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLER 779

Query: 506  GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
            G ++H   ++  L S + +G+A++ +YAKCG +D + R F +M  ++  SWN++IS YA+
Sbjct: 780  GMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYAR 839

Query: 566  HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            HG G++A+  F  M+  G+  PD  TF  VLSACSH GLVD+G + F SM   YG  P  
Sbjct: 840  HGHGQKALKIFTRMKQHGQ-SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRI 898

Query: 626  DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA-AHG-NLRLGRIIAGLL 683
            +H SCM+DLLGRAG + + E  I +  +      W  +  AC  A+G N  LG+  A +L
Sbjct: 899  EHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKML 958

Query: 684  LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +E E      YVLLSN++AA G WE+    R  +++  V K  GCSW+
Sbjct: 959  IELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWV 1006



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/597 (26%), Positives = 280/597 (46%), Gaps = 50/597 (8%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPD-IYSLSTTLAACANLRNAAF-GNQL 79
           + +N  +  L+R    ++A  +F ++    ++  + +  L +T    +NL+     G ++
Sbjct: 418 VTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEV 477

Query: 80  HAYALRAGL-KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           HAY  R+GL  A   + N ++++Y                              CT    
Sbjct: 478 HAYLFRSGLVDARISIGNALVNMY----------------------------GKCTA--- 506

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +D AC VF  MP +D   +N+MI+G   N   +  +  F  M +  +   N+S  S LS 
Sbjct: 507 IDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSS 566

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C + G L  GRQ+H    K G    VSV NAL+T+Y    ++ +  KVF +   Y  D +
Sbjct: 567 CSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY--DQV 624

Query: 258 SYNVMMDGLASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           S+N  +  LA     V +AL  F +M+ A  RP+ +TF+++++A     V   G+Q+HA 
Sbjct: 625 SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHAL 684

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRS 372
            +K       ++ NA +  Y  C ++++  +IF+R+ E +D VSWN+MIS Y    +   
Sbjct: 685 ILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHK 744

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A+     M   G + D FTF ++L++   +  +E    +HA      + +++ V +AL+ 
Sbjct: 745 AMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVD 804

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK  +I  A + F  M  RNI +WN++I+G+  +G   + L+ F+ +      PD  T
Sbjct: 805 MYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVT 864

Query: 490 LSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF--N 546
               LS+C+ +  +  G K          L  ++   + M+ L  + GD+   +  F   
Sbjct: 865 FVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVK-KIEDFIKT 923

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           M ++ + + W  ++ A  +   G+      +A + +  ++P  A    +LS    AG
Sbjct: 924 MPMDPNILIWRTVLGACCR-ANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAG 979



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 154/638 (24%), Positives = 301/638 (47%), Gaps = 66/638 (10%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           N LH    + G        NT++++Y    +LVS +++F E+   ++ SW+  +S  T+ 
Sbjct: 160 NHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ- 218

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                     ++MPD    ++  +I+            GL           ++++  S L
Sbjct: 219 ----------NRMPDEACSLFKGVISS-----------GLL---------PNHFAVGSAL 248

Query: 197 SVCD---AGLLEFGRQLHSLVTKSGFSCLVSVV--NALITMYFNC-GNVVDACKVFEEAK 250
             C    +  ++ G Q+H+ + K    C+  ++  N L++MY +C G++ DA +VF+E K
Sbjct: 249 RACQQCGSTGIKLGMQIHAFICK--LPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIK 306

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA----SLRPSELTFVS-VMSACLCPR 305
               + +++N ++      G    A   F  M +     +LRP+E T  S V +AC    
Sbjct: 307 --FRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLAD 364

Query: 306 VGYQVHAQAM----KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
            G  +  Q +    KSGF     V +A +  ++  G +D A MIF ++ +++ V+ N ++
Sbjct: 365 CGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLM 424

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAFV 412
              A+++ G  A   + EM+ + +  +  +   LL++  F E   +         +HA++
Sbjct: 425 VGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLST--FTEFSNLKEGKRKGQEVHAYL 481

Query: 413 FINGII-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           F +G++   I + NAL++ Y K   I  A  +F  M  ++ ++WN++I+G   N    + 
Sbjct: 482 FRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEA 541

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           +  F  +  + + P  +++   LSSC+ +  L  G+QIHG   K  L   +S+ NA++TL
Sbjct: 542 VSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTL 601

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK-EAVSCFKAMQDVGRIKPDQA 590
           YA+   ++   +VF  M E D +SWN+ I A A++     +A+  F  M   G  +P++ 
Sbjct: 602 YAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAG-WRPNRV 660

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +L+A S   ++  G +I  +++  Y         + +L   G+   +++ E + + 
Sbjct: 661 TFINILAAVSSFSVLGLGHQI-HALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSR 719

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
              +    +W ++ S     G L     +   +++R Q
Sbjct: 720 MSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQ 757



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S+ +A  T  + C   + A  +F RL  K    +N   STY      R    ++ ++Q +
Sbjct: 94  SLRDATNTCVAGCDFPEMASHLFMRLLNK----YN---STYT---FLRHYTFSHSQLQQL 143

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
               D +   S L  +  +      H  ++  G   ++   N LI+ Y +   +  A ++
Sbjct: 144 DSEFDRYKTSSSLYDANHL------HLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKL 197

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS- 502
           F  M  +N+++W+ LI+G+  N  P +    F  ++ S L P+ + +  AL +C +  S 
Sbjct: 198 FDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGST 257

Query: 503 -LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-GDLDCSLRVFNMMIEKDTISWNALI 560
            ++ G QIH ++ K   +S M L N ++++Y+ C G +D + RVF+ +  +++++WN++I
Sbjct: 258 GIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSII 317

Query: 561 SAYAQHGEGKEAVSCFKAMQDVG---RIKPDQATFTA-VLSACSHAGLVDDGTRIFDSM- 615
           S Y + G+   A   F  MQ  G    ++P++ T  + V +ACS   L D G  + + M 
Sbjct: 318 SVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACS---LADCGLVLLEQML 374

Query: 616 --VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             +   GF+      S +++   R G +D A+ +    +
Sbjct: 375 TRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMY 413


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 222/709 (31%), Positives = 356/709 (50%), Gaps = 43/709 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS +G+ ++ L  + Q+     +  +  + +T ++ C +L N   G Q+ ++ + +GL+ 
Sbjct: 120 LSSNGYLEETLRAYRQMRR-EGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQN 178

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              VAN++++++ N                               +G V  A ++FD+M 
Sbjct: 179 QVSVANSLITMFGN-------------------------------LGRVQDAEKLFDRME 207

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           + D    NAMI+  +  G       +F +M    +R D  +  S++SVC  A     G  
Sbjct: 208 EHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSG 267

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +HSL  +S     V+V+NAL+ MY   G + DA  +F        D IS+N M+      
Sbjct: 268 IHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRR--DLISWNTMISSYVQN 325

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
               +AL     +   +  P+ LTF S + AC  P     G  VHA  ++   +    V 
Sbjct: 326 CNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVG 385

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N+ ITMY  C  +++A  +F  +   D+VS+N +I  YA    G  A+  +  ++S GI+
Sbjct: 386 NSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIK 445

Query: 387 PDEFTF----GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  T     GS  +S+        +HA++   G +++  V+N+LI+ YAK   ++ +  
Sbjct: 446 PNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTN 505

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF++++ +NI++WN +I      G   + L+ F ++  +  + D   L+  LSSCA ++S
Sbjct: 506 IFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLAS 565

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  G Q+HG  +K+ L S   + NA + +Y KCG ++  L++      +    WN LIS 
Sbjct: 566 LEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISG 625

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA++G  KEA   FK M  +GR KPD  TF A+LSACSHAGLVD G   ++SM + +G  
Sbjct: 626 YAKYGYFKEAEETFKQMVAMGR-KPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVS 684

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P   H  C++DLLGR G   EAER I    +      W +L S+   H NL +GR  A  
Sbjct: 685 PGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKK 744

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE +    S YVLLSN+YA    W +   +R  +K   + K+P CSW+
Sbjct: 745 LLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWL 793



 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 184/631 (29%), Positives = 318/631 (50%), Gaps = 53/631 (8%)

Query: 58  YSLSTTLAACANL---RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS-VKR 113
           ++L++ + AC         A G  +HA   RAGL    ++   +L LY  +R +VS  +R
Sbjct: 42  FALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLY-GSRGIVSDARR 100

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +F E+   +V SWT                               A++   + NGY +  
Sbjct: 101 LFWEMPERNVVSWT-------------------------------ALMVALSSNGYLEET 129

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALI 230
           +  +R+M +  V  +  +FA+V+S+C  G LE    G Q+ S V  SG    VSV N+LI
Sbjct: 130 LRAYRQMRREGVPCNANAFATVVSLC--GSLENEVPGLQVASHVIVSGLQNQVSVANSLI 187

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TM+ N G V DA K+F+  + +  D IS N M+   +  G   +  + F DM    LRP 
Sbjct: 188 TMFGNLGRVQDAEKLFDRMEEH--DTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 245

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             T  S+MS C        G  +H+  ++S  ++  +V NA + MYS+ GK+ +A  +F 
Sbjct: 246 ATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFW 305

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            +  +D++SWNTMIS+Y Q      A+    ++      P+  TF S L   +S G +  
Sbjct: 306 NMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALID 365

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +M+HA V    +  N+ V N+LI+ Y K   ++ A ++F +M   +++++N LI G+ +
Sbjct: 366 GKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAV 425

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMS 523
                + +Q FS +  + ++P+  T+     S    + L  +G+ +H Y+++   +S   
Sbjct: 426 LEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEY 485

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + N++IT+YAKCG+L+ S  +FN +  K+ +SWNA+I+A AQ G G+EA+  F  MQ  G
Sbjct: 486 VANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAG 545

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             K D+      LS+C+    +++G ++   +    G       ++  +D+ G+ G ++E
Sbjct: 546 N-KLDRVCLAECLSSCASLASLEEGMQLH-GLGMKSGLDSDSYVVNAAMDMYGKCGKMNE 603

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLR 674
             +++  Q I+ +   W  L S  A +G  +
Sbjct: 604 MLQMVPDQAIRPQ-QCWNTLISGYAKYGYFK 633



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 265/513 (51%), Gaps = 15/513 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-----DAGL 203
           MPDR    +   ++GC   G +     L R M +  V    ++ AS+++ C     D G 
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEG- 59

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G  +H+L  ++G    V +  AL+ +Y + G V DA ++F E      + +S+  +M
Sbjct: 60  IACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPER--NVVSWTALM 117

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGFE 320
             L+S G +EE L  +R M    +  +   F +V+S C  L   V G QV +  + SG +
Sbjct: 118 VALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQ 177

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              SV+N+ ITM+ + G++ +A  +F R++E D +S N MIS Y+ + +     L + +M
Sbjct: 178 NQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDM 237

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+RPD  T  SL+   AS+        IH+    + + +++ V NAL++ Y+   ++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  +F NMS R++I+WNT+I+ ++ N      L+   +L  +   P+  T S AL +C
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +   +L  GK +H  VL+ +L   + +GN++IT+Y KC  ++ + +VF  M   D +S+N
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LI  YA   +G +A+  F  ++  G IKP+  T   +  + + +  + +  R   + + 
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAG-IKPNYITMINIHGSFTSSNDLHNYGRPLHAYII 476

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             GF+  E   + ++ +  + G L+ +  + NS
Sbjct: 477 RTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 8/173 (4%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLR 71
           NS T+K ++   N  +A  ++ GH ++AL LF+ + H+ +KL  D   L+  L++CA+L 
Sbjct: 508 NSITNKNIV-SWNAIIAANAQLGHGEEALKLFIDMQHAGNKL--DRVCLAECLSSCASLA 564

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           +   G QLH   +++GL +  +V N  + +Y     +  + ++  +        W T +S
Sbjct: 565 SLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLIS 624

Query: 132 ACTKMGHVDYACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
              K G+   A E F +M       D   + A+++ C+  G  D GI  +  M
Sbjct: 625 GYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSM 677


>gi|297802780|ref|XP_002869274.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315110|gb|EFH45533.1| hypothetical protein ARALYDRAFT_491483 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 686

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 213/687 (31%), Positives = 360/687 (52%), Gaps = 57/687 (8%)

Query: 56  DIYSLSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           D  +L   L AC  +L+    G Q+H ++   G  ++  V+N ++ +Y+ A         
Sbjct: 2   DEVTLCLALKACRGDLKR---GCQIHGFSTTCGFTSFVCVSNAVMGMYRKA--------- 49

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G  D A  +F+ + D D+  +N +++G  +N    I +
Sbjct: 50  ----------------------GRFDNALYIFENLVDPDVVSWNTILSGFDDN---QIAL 84

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                M    V  D +++++ LS C  +     G QL S V KSG    + V N+ ITMY
Sbjct: 85  NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNSFITMY 144

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSEL 292
              G+   A +VF+E      D IS+N ++ GL+  G    EA++ FRDM+   +    +
Sbjct: 145 SRSGSFRGARRVFDEMP--FKDMISWNSLLSGLSQEGTFGFEAVLIFRDMMREGVELDHV 202

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           +F SV++ C      ++  Q+H   +K G+E+   V N  ++ YS CG ++    +F ++
Sbjct: 203 SFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFYQM 262

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
            E+++VSW TMIS+   R+    A+  +L M+  G+ P+E TF  LL +    E ++   
Sbjct: 263 SERNVVSWTTMISS--NRD---DAVSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGL 317

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH      G ++   V N+ I+ YAK E ++ A + F +++ R II+WN +I+GF  NG
Sbjct: 318 KIHGLCIKTGFVSEPSVGNSFITMYAKFEALEDAKKAFDDITFREIISWNAMISGFAQNG 377

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSL 524
           F  + L+ F     +E  P+EYT    L++ A     S++HG++ H ++LK  L S   +
Sbjct: 378 FSHEALKMFLSA-TAETMPNEYTFGSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVV 436

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            +A++ +YAK G+++ S +VFN M +++   W ++ISAY+ HG+    ++ F  M     
Sbjct: 437 SSALLDMYAKRGNINESEKVFNEMSQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIK-EN 495

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           + PD  TF +VL+AC+  G+VD G  I + M+ DY   P+ +H SCM+D+LGRAG L EA
Sbjct: 496 VAPDLVTFLSVLTACNRKGMVDKGHEILNMMIEDYNLEPSHEHYSCMVDMLGRAGRLKEA 555

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           E +++            ++  +C  HGN+++G  +A L +E + +    YV + NIYA  
Sbjct: 556 EELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEK 615

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
             W++AA IR+ +++  V K+ G SWI
Sbjct: 616 EQWDKAAEIRKAMRKKNVSKEAGFSWI 642



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 255/512 (49%), Gaps = 51/512 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q AL+  V++ S+  +  D ++ ST L+ C        G QL +  +++GL++   V N+
Sbjct: 81  QIALNFVVRMKSA-GVVFDAFTYSTALSFCVGSEGFRLGLQLQSTVVKSGLESDLVVGNS 139

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
            +++Y  +      +RVF E+   D+ SW + LS  ++ G                    
Sbjct: 140 FITMYSRSGSFRGARRVFDEMPFKDMISWNSLLSGLSQEGTF------------------ 181

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTK 216
                     G+E + I  FR+M +  V  D+ SF SV++  C    L+  RQ+H L  K
Sbjct: 182 ----------GFEAVLI--FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK 229

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACK-VFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            G+  L+ V N L++ Y  CG V++A K VF +      + +S+  M+    S  R ++A
Sbjct: 230 RGYESLLEVGNILMSRYSKCG-VLEAVKSVFYQMSER--NVVSWTTMI----SSNR-DDA 281

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F +M +  + P+E+TFV +++A  C    + G ++H   +K+GF +  SV N+ ITM
Sbjct: 282 VSIFLNMRLDGVYPNEVTFVGLLNAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITM 341

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+    +++A   F  +  ++I+SWN MIS +AQ      A+  +L   +  + P+E+TF
Sbjct: 342 YAKFEALEDAKKAFDDITFREIISWNAMISGFAQNGFSHEALKMFLSATAETM-PNEYTF 400

Query: 393 GSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           GS+L +  F E +     +  HA +   G+ +   VS+AL+  YAK   I ++ ++F+ M
Sbjct: 401 GSVLNAIAFAEDISVKHGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNINESEKVFNEM 460

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           S RN   W ++I+ +  +G     +  F E++   + PD  T    L++C R   +  G 
Sbjct: 461 SQRNQFVWTSIISAYSSHGDFNSVMNLFHEMIKENVAPDLVTFLSVLTACNRKGMVDKGH 520

Query: 508 QIHGYVLKN-NLISKMSLGNAMITLYAKCGDL 538
           +I   ++++ NL       + M+ +  + G L
Sbjct: 521 EILNMMIEDYNLEPSHEHYSCMVDMLGRAGRL 552


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/579 (34%), Positives = 313/579 (54%), Gaps = 19/579 (3%)

Query: 167 NGYEDIG-----IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFS 220
            G+  +G      G FRE+ +   R DNY+   V+  C D   L+ GR +H +V K G  
Sbjct: 3   GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 62

Query: 221 CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFR 280
               V  AL+ MY  C  + DA  +F++ +    D +++ VM+ G A  G+  E+L+ F 
Sbjct: 63  LDHFVCAALVDMYVKCREIEDARFLFDKMQER--DLVTWTVMIGGYAECGKANESLVLFE 120

Query: 281 DMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM-----KSGFEAYTSVSNAAITMYSS 335
            M    + P ++  V+V+ AC   ++G    A+ +     +  F+    +  A I MY+ 
Sbjct: 121 KMREEGVVPDKVAMVTVVFAC--AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG ++ A  IF R++EK+++SW+ MI+ Y     GR A+  +  M S G+ PD+ T  SL
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238

Query: 396 L-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L A S    ++M  +IH  V+  G+  +  V  AL+  Y K   I+ A  +F  M  R++
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           +TW  +I G+   G   + L  F ++    + PD+  +   + +CA++ ++   + I  Y
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDY 358

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           + +      + LG AMI ++AKCG ++ +  +F+ M EK+ ISW+A+I+AY  HG+G++A
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKA 418

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F  M   G I P++ T  ++L ACSHAGLV++G R F  M  DY       H +C++
Sbjct: 419 LDLFPMMLRSG-ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVV 477

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGRAG LDEA ++I S  ++     W A   AC  H ++ L    A  LLE +   P 
Sbjct: 478 DLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPG 537

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            Y+LLSNIYA AG WE+ A  R+L+ +  + K PG +WI
Sbjct: 538 HYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 576



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 225/464 (48%), Gaps = 12/464 (2%)

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           M+ G A VG        FR+++    RP   T   V+ AC   +   +G  +H    K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    V  A + MY  C +I++A  +F ++QE+D+V+W  MI  YA+      +++ + 
Sbjct: 61  LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +M+  G+ PD+    +++   A  G +    +I  ++       ++ +  A+I  YAK  
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A +IF  M  +N+I+W+ +I  +  +G   + L  F  +L S + PD+ TL+  L 
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +C+ + +L+ G+ IH  V K  L     +  A++ +Y KC +++ +  +F+ M E+D ++
Sbjct: 241 ACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVT 300

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I  YA+ G   E++  F  M++ G + PD+     V+ AC+  G +    R  D  
Sbjct: 301 WTVMIGGYAECGNANESLVLFDKMREEG-VVPDKVAMVTVVFACAKLGAMHKA-RTIDDY 358

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
           +    F       + M+D+  + G ++ A  + +    +    +W A+ +A   HG  R 
Sbjct: 359 IQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRK 417

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELL 717
              +  ++L R    P+   L+S +YA   AGL EE      L+
Sbjct: 418 ALDLFPMML-RSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM 460



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 139/572 (24%), Positives = 261/572 (45%), Gaps = 46/572 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD Y+L   + AC +L+N   G  +H    + GL     V   ++ +Y   R++   + 
Sbjct: 27  RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDAR- 85

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                          FL               FDKM +RDL  +  MI G  E G  +  
Sbjct: 86  ---------------FL---------------FDKMQERDLVTWTVMIGGYAECGKANES 115

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           + LF +M +  V  D  +  +V+  C   G +   R +   + +  F   V +  A+I M
Sbjct: 116 LVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDM 175

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  CG V  A ++F+  +    + IS++ M+      G+  +AL  FR ML + + P ++
Sbjct: 176 YAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKI 233

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  S++ AC   +   +G  +H    K G +    V  A + MY  C +I++A  +F ++
Sbjct: 234 TLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKM 293

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
            E+D+V+W  MI  YA+      +++ + +M+  G+ PD+    +++   A  G +    
Sbjct: 294 PERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKAR 353

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            I  ++       ++ +  A+I  +AK   ++ A +IF  M  +N+I+W+ +I  +  +G
Sbjct: 354 TIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHG 413

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLG 525
              + L  F  +L S + P++ TL   L +C+    +  G +    + ++ ++ + +   
Sbjct: 414 QGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHY 473

Query: 526 NAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             ++ L  + G LD +L++  +M +EKD   W A + A   H   K+ V   KA   +  
Sbjct: 474 TCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTH---KDVVLAEKAATSLLE 530

Query: 585 IKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
           ++P       +LS   ++AG  +D  +  D M
Sbjct: 531 LQPQNPGHYILLSNIYANAGRWEDVAKTRDLM 562



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 59/371 (15%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A     G  + AL LF  + SS  L PD  +L++ L AC++L+N   G  +H    + G
Sbjct: 204 IAAYGYHGQGRKALDLFRMMLSSGML-PDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V   ++ +Y   R++   + +F ++   D+ +WT  +    + G+ + +  +FD
Sbjct: 263 LDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFD 322

Query: 148 KMPDRD-LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF 206
           KM +   +P   AM+T                                V +    G +  
Sbjct: 323 KMREEGVVPDKVAMVT-------------------------------VVFACAKLGAMHK 351

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            R +   + +  F   V +  A+I M+  CG V  A ++F+  +    + IS++ M+   
Sbjct: 352 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK--NVISWSAMIAAY 409

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSG-------F 319
              G+  +AL  F  ML + + P+++T VS++ AC         HA  ++ G       +
Sbjct: 410 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC--------SHAGLVEEGLRFFSLMW 461

Query: 320 EAYTSVSNA-----AITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLG 370
           E Y+  ++       + +    G++DEA  +   +  EKD   W   +    T+    L 
Sbjct: 462 EDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLA 521

Query: 371 RSAILAYLEMQ 381
             A  + LE+Q
Sbjct: 522 EKAATSLLELQ 532


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 321/601 (53%), Gaps = 12/601 (1%)

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           D A +VFD+MP R+   + ++I    +NG     +GLF  M +     D ++  S +  C
Sbjct: 103 DSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRAC 162

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            + G +  GRQ+H+   KS     + V NAL+TMY   G V D   +FE  K    D IS
Sbjct: 163 TELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDK--DLIS 220

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           +  ++ G A  G   EAL  FR+M+V  S  P+E  F S   AC        G Q+H  +
Sbjct: 221 WGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLS 280

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K   +    V  +   MY+ C  +D A + F R++  D+VSWN++++ Y+   L   A+
Sbjct: 281 IKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEAL 340

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
           + + EM+  G+RPD  T   LL +    + +    +IH+++   G+  ++ V N+L+S Y
Sbjct: 341 VLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMY 400

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A+   +  A  +FH +  ++++TWN+++     +  P + L+ FS L  SE   D  +L+
Sbjct: 401 ARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLN 460

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
             LS+ A +      KQ+H Y  K  L+    L N +I  YAKCG LD ++R+F +M   
Sbjct: 461 NVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNN 520

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D  SW++LI  YAQ G  KEA   F  M+ +G I+P+  TF  VL+ACS  G V++G  
Sbjct: 521 RDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLG-IRPNHVTFIGVLTACSRVGFVNEGCY 579

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            +  M  +YG +P  +H SC++DLL RAG L EA   I+    +     W  L +A   H
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            ++ +G+  A  +L  +    + YVLL NIYAA+G W E A +++ ++ +GV K PG SW
Sbjct: 640 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 699

Query: 731 I 731
           +
Sbjct: 700 V 700



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 262/554 (47%), Gaps = 48/554 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   DAL LF  +  S     D ++L + + AC  L +   G Q+HA+AL++   +  
Sbjct: 129 QNGRAGDALGLFSSMLRS-GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDL 187

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y                               +K G VD    +F+++ D+
Sbjct: 188 IVQNALVTMY-------------------------------SKNGLVDDGFMLFERIKDK 216

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN-YSFASVLSVCDA-GLLEFGRQL 210
           DL  + ++I G  + G+E   + +FREM        N + F S    C A G  E+G Q+
Sbjct: 217 DLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQI 276

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  K      + V  +L  MY  C N+  A   F   +    D +S+N +++  +  G
Sbjct: 277 HGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEG 334

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSN 327
            + EAL+ F +M  + LRP  +T   ++ AC+     Y    +H+  +K G +   SV N
Sbjct: 335 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 394

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + ++MY+ C  +  A  +F  ++++D+V+WN++++  AQ N     +  +  +       
Sbjct: 395 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 454

Query: 388 DEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  +  ++L++S   G+ EMV+ +HA+ F  G++ +  +SN LI  YAK   +  A ++F
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514

Query: 445 HNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
             M + R++ +W++LI G+   G+  +    FS +    +RP+  T    L++C+R+  +
Sbjct: 515 EIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFV 574

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
             G   +  +     ++      + ++ L A+ G L  +    + M  E D I W  L++
Sbjct: 575 NEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 634

Query: 562 AYAQHGE---GKEA 572
           A   H +   GK A
Sbjct: 635 ASKMHNDMEMGKRA 648



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 172/352 (48%), Gaps = 7/352 (1%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           T + N  ITMY  C   D A  +F  +  ++ VSW ++I+ + Q      A+  +  M  
Sbjct: 86  TVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLR 145

Query: 383 VGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G   D+F  GS + +    G +     +HA    +   +++ V NAL++ Y+KN  +  
Sbjct: 146 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDD 205

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCA 498
            + +F  +  +++I+W ++I GF   GF ++ LQ F E+++     P+E+    A  +C 
Sbjct: 206 GFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACG 265

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + S  +G+QIHG  +K  L   + +G ++  +YA+C +LD +   F  +   D +SWN+
Sbjct: 266 AVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNS 325

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +++AY+  G   EA+  F  M+D G ++PD  T   +L AC     +  G R+  S +  
Sbjct: 326 IVNAYSVEGLLSEALVLFSEMRDSG-LRPDGITVRGLLCACVGRDALYHG-RLIHSYLVK 383

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            G        + +L +  R   L  A  V +    Q     W ++ +ACA H
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVV-TWNSILTACAQH 434



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 204/450 (45%), Gaps = 59/450 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  ++ G   +AL +F ++       P+ +   +   AC  + +  +G Q+H  +++  
Sbjct: 225 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L    +V  ++  +Y   ++L S +  F  I+ PD+ SW + ++A +  G +  A  +F 
Sbjct: 285 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLL 204
           +M D  L                               R D  +   +L  C   DA  L
Sbjct: 345 EMRDSGL-------------------------------RPDGITVRGLLCACVGRDA--L 371

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR +HS + K G    VSV N+L++MY  C ++  A  VF E K    D +++N ++ 
Sbjct: 372 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ--DVVTWNSILT 429

Query: 265 GLASVGRVEEALIRFRDMLVASLRPS--ELTFVSVMSACLCPRVGY-----QVHAQAMKS 317
             A     EE L  F   L+    PS   ++  +V+SA     +GY     QVHA A K+
Sbjct: 430 ACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKA 485

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILA 376
           G      +SN  I  Y+ CG +D+A  +F  +   +D+ SW+++I  YAQ    + A   
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 545

Query: 377 YLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           +  M+S+GIRP+  TF G L A S  GF+   E  + +  +    GI+   +  + ++  
Sbjct: 546 FSRMRSLGIRPNHVTFIGVLTACSRVGFVN--EGCYYYSIMEPEYGIVPTREHCSCIVDL 603

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLI 459
            A+  ++ +A      M    +II W TL+
Sbjct: 604 LARAGKLTEAANFIDQMPFEPDIIMWKTLL 633



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 156/356 (43%), Gaps = 43/356 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   S  G   +AL LF ++  S  L+PD  ++   L AC        G  +H
Sbjct: 320 LVSWNSIVNAYSVEGLLSEALVLFSEMRDS-GLRPDGITVRGLLCACVGRDALYHGRLIH 378

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +Y ++ GL     V N++LS+Y    DL S   VF EI++ DV +W + L+AC +  H  
Sbjct: 379 SYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH-- 436

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-C 199
                    P+  L                     LF  ++K +   D  S  +VLS   
Sbjct: 437 ---------PEEVLK--------------------LFSLLNKSEPSLDRISLNNVLSASA 467

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G  E  +Q+H+   K+G      + N LI  Y  CG++ DA ++F E  G   D  S+
Sbjct: 468 ELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSW 526

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG------YQVHAQ 313
           + ++ G A  G  +EA   F  M    +RP+ +TF+ V++A  C RVG      Y     
Sbjct: 527 SSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTA--CSRVGFVNEGCYYYSIM 584

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
             + G        +  + + +  GK+ EA     ++  E DI+ W T+++     N
Sbjct: 585 EPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHN 640



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N  + N LI+ Y +      A Q+F  M  RN ++W ++I   + NG     L  FS +L
Sbjct: 85  NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            S    D++ L  A+ +C  +  +  G+Q+H + LK+   S + + NA++T+Y+K G +D
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               +F  + +KD ISW ++I+ +AQ G   EA+  F+ M   G   P++  F +   AC
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRAC 264

Query: 600 SHAGLVDDGTRI 611
              G  + G +I
Sbjct: 265 GAVGSWEYGEQI 276


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 228/697 (32%), Positives = 354/697 (50%), Gaps = 72/697 (10%)

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT------FLSACTKMGHVDYAC 143
           A P  A +  +L    R L++V+ +       D+    T       L+A  + G +  A 
Sbjct: 61  ALPPAAKSAAAL----RSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAAL 116

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRD---------NYSFA 193
            +F+ MP RD   +N++I            + LFR  +  LD  RD         +++  
Sbjct: 117 ALFNAMPSRDAVTFNSLIAA----------LCLFRRWLPALDALRDMLLEGHPLSSFTLV 166

Query: 194 SVLSVCD--AGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVF--- 246
           SVL  C   A  L  GR+ H+   K+GF         NAL++MY   G V DA  +F   
Sbjct: 167 SVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSV 226

Query: 247 ---EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
              +   G V   +++N M+  L   GR  EA+    DM+   +RP  +TF S + AC  
Sbjct: 227 DTTDSPGGGV---VTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQ 283

Query: 303 --CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ--EKDIVSW 357
                +G ++HA  +K S   A + V++A + MY+S  ++  A  +F  +    + +  W
Sbjct: 284 LEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLW 343

Query: 358 NTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           N M+  YAQ  +   A+  +  M++  G+ P E T   +L +    E     E +H +V 
Sbjct: 344 NAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVL 403

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G+  N  V NAL+  YA+   ++ A  IF  + PR++++WNTLI G ++ G      Q
Sbjct: 404 KRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQ 463

Query: 474 HFSELLM------------------SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
              E+                      + P+  TL   L  CA +++   GK+IHGY ++
Sbjct: 464 LVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMR 523

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           + L S +++G+A++ +YAKCG L  S  VF+ + +++ I+WN LI AY  HG G EA++ 
Sbjct: 524 HALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIAL 583

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M      KP++ TF A L+ACSH+G+VD G  +F SM  ++G  P  D  +C +D+L
Sbjct: 584 FDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDIL 643

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALF-SACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           GRAG LDEA  +I S     +  + W+ F  AC  H N+ LG I A  L + E D+ S Y
Sbjct: 644 GRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHY 703

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           VLL NIY+AAGLWE+++ +R  +++ GV K+PGCSWI
Sbjct: 704 VLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWI 740



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/502 (23%), Positives = 223/502 (44%), Gaps = 67/502 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L +SG   +A+ +   +  +  ++PD  + ++ L AC+ L   + G ++HAY L
Sbjct: 240 NTMVSLLVQSGRCGEAIEVIYDM-VARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298

Query: 85  R-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           + + L A   VA+ ++ +Y +   +   +RVF  +                  GH     
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPG----------------GH----- 337

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCDAG 202
                   R L ++NAM+ G  + G ++  + LF  M  +  V     + A VL  C   
Sbjct: 338 --------RQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARS 389

Query: 203 LLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
               G++ +H  V K G +    V NAL+ +Y   G++  A  +F   +    D +S+N 
Sbjct: 390 ETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPR--DVVSWNT 447

Query: 262 MMDGLASVGRVEEALIRFRDMLV------------------ASLRPSELTFVSVMSAC-- 301
           ++ G    G + +A    R+M                      + P+ +T ++++  C  
Sbjct: 448 LITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAM 507

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
              P  G ++H  AM+   ++  +V +A + MY+ CG +  +  +F RL ++++++WN +
Sbjct: 508 LAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVL 567

Query: 361 ISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFIN 415
           I  Y    LG  AI  +  M  S   +P+E TF + LA+   SG ++  +E+ H+    +
Sbjct: 568 IMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNH 627

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLN-GFPVQGL 472
           G+     +    +    +  R+ +AY I  +M P  + +  W++ +    L+   P   L
Sbjct: 628 GVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSAWSSFLGACRLHRNVP---L 684

Query: 473 QHFSELLMSELRPDEYTLSVAL 494
              +   + +L PDE +  V L
Sbjct: 685 GEIAAERLFQLEPDEASHYVLL 706


>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g32430, mitochondrial; Flags: Precursor
 gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
 gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
 gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 213/688 (30%), Positives = 360/688 (52%), Gaps = 59/688 (8%)

Query: 56  DIYSLSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           D  +L   L AC  +L+    G Q+H ++  +G  ++  V+N ++ +Y+ A         
Sbjct: 77  DEVTLCLALKACRGDLKR---GCQIHGFSTTSGFTSFVCVSNAVMGMYRKA--------- 124

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G  D A  +F+ + D D+  +N +++G  +N    I +
Sbjct: 125 ----------------------GRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIAL 159

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
                M    V  D +++++ LS C    G L  G QL S V K+G    + V N+ ITM
Sbjct: 160 NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFITM 218

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSE 291
           Y   G+   A +VF+E      D IS+N ++ GL+  G    EA++ FRDM+   +    
Sbjct: 219 YSRSGSFRGARRVFDEMS--FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276

Query: 292 LTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           ++F SV++ C      ++  Q+H   +K G+E+   V N  ++ YS CG ++    +F +
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
           + E+++VSW TMIS+         A+  +L M+  G+ P+E TF  L+ +    E ++  
Sbjct: 337 MSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391

Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             IH      G ++   V N+ I+ YAK E ++ A + F +++ R II+WN +I+GF  N
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMS 523
           GF  + L+ F     +E  P+EYT    L++ A     S++ G++ H ++LK  L S   
Sbjct: 452 GFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A++ +YAK G++D S +VFN M +K+   W ++ISAY+ HG+ +  ++ F  M    
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK-E 569

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            + PD  TF +VL+AC+  G+VD G  IF+ M+  Y   P+ +H SCM+D+LGRAG L E
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           AE +++            ++  +C  HGN+++G  +A L +E + +    YV + NIYA 
Sbjct: 630 AEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAE 689

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
              W++AA IR+ +++  V K+ G SWI
Sbjct: 690 KEEWDKAAEIRKAMRKKNVSKEAGFSWI 717



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 250/512 (48%), Gaps = 51/512 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q AL+  V++ S+  +  D ++ ST L+ C        G QL +  ++ GL++   V N+
Sbjct: 156 QIALNFVVRMKSA-GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNS 214

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
            +++Y  +      +RVF E+   D+ SW + LS  ++ G                    
Sbjct: 215 FITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF------------------ 256

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTK 216
                     G+E + I  FR+M +  V  D+ SF SV++  C    L+  RQ+H L  K
Sbjct: 257 ----------GFEAVVI--FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK 304

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACK-VFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            G+  L+ V N L++ Y  CG V++A K VF +      + +S+  M+         ++A
Sbjct: 305 RGYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSER--NVVSWTTMIS-----SNKDDA 356

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F +M    + P+E+TFV +++A  C    + G ++H   +K+GF +  SV N+ IT+
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+    +++A   F  +  ++I+SWN MIS +AQ      A+  +L   +  + P+E+TF
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475

Query: 393 GSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           GS+L +  F E +     +  HA +   G+ +   VS+AL+  YAK   I ++ ++F+ M
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           S +N   W ++I+ +  +G     +  F +++   + PD  T    L++C R   +  G 
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 595

Query: 508 QIHGYVLK-NNLISKMSLGNAMITLYAKCGDL 538
           +I   +++  NL       + M+ +  + G L
Sbjct: 596 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 214/605 (35%), Positives = 326/605 (53%), Gaps = 21/605 (3%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFAS 194
           +G+V  A   FD + +RD+  +N MI+G    GY    I  F   M    ++ D  +F S
Sbjct: 99  LGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPS 158

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           VL  C    +  G ++H L  K GF   V V  +LI +Y   G VV+A  +F+E      
Sbjct: 159 VLKACRN--VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTR-- 214

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQV 310
           D  S+N M+ G    G  +EAL      L   LR  + +T VS++SAC        G  +
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALT-----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+ ++K G E+   VSN  I +Y+  G + +   +F R+  +D++SWN++I  Y      
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329

Query: 371 RSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING-IITNIQVSNA 426
             AIL + EM+   I+PD  T     S+L+  G I     +  F    G  + +I + NA
Sbjct: 330 LRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNA 389

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS--ELLMSELR 484
           ++  YAK   +  A  +F+ +  +++I+WNT+I+G+  NGF  + ++ ++  E    E+ 
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEIS 449

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            ++ T    L +C++  +LR G ++HG +LKN L   + +G ++  +Y KCG LD +L +
Sbjct: 450 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSL 509

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  +   +++ WN LI+ +  HG G++AV  FK M D G +KPD  TF  +LSACSH+GL
Sbjct: 510 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGL 568

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           VD+G   F+ M  DYG  P+  H  CM+DL GRAG L+ A   I S  +Q  +  W AL 
Sbjct: 569 VDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALL 628

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           SAC  HGN+ LG+I +  L E E +    +VLLSN+YA+AG WE    IR +    G+ K
Sbjct: 629 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRK 688

Query: 725 QPGCS 729
            PG S
Sbjct: 689 TPGWS 693



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 154/588 (26%), Positives = 269/588 (45%), Gaps = 61/588 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   R+G+  + +  F     S  L+PD  +  + L AC   RN   GN++H  AL
Sbjct: 121 NLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLAL 177

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +VA +++ LY     +V+ + +F E+   D+ SW                  
Sbjct: 178 KFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSW------------------ 219

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                        NAMI+G  ++G     + L   +  +    D+ +  S+LS C +AG 
Sbjct: 220 -------------NAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGD 262

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G  +HS   K G    + V N LI +Y   G++ D  KVF+  + YV D IS+N ++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFD--RMYVRDLISWNSII 320

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSG-F 319
                  +   A++ F++M ++ ++P  LT +   S++S     R    V    ++ G F
Sbjct: 321 KAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWF 380

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               ++ NA + MY+  G +D A  +F  L  KD++SWNT+IS YAQ      AI  Y  
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNI 440

Query: 380 MQSVG--IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           M+  G  I  ++ T+ S+L   + +G +     +H  +  NG+  ++ V  +L   Y K 
Sbjct: 441 MEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKC 500

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            R+  A  +F+ +   N + WNTLI     +G   + +  F E+L   ++PD  T    L
Sbjct: 501 GRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 560

Query: 495 SSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKD 552
           S+C+    +  G+     +  +  +   +     M+ LY + G L+ +L  + +M ++ D
Sbjct: 561 SACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPD 620

Query: 553 TISWNALISAYAQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              W AL+SA   HG    GK       A + +  ++P+   +  +LS
Sbjct: 621 ASIWGALLSACRVHGNVDLGK------IASEHLFEVEPEHVGYHVLLS 662



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 185/414 (44%), Gaps = 44/414 (10%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA+ + S       +S   + +Y   G +  A   F  +  +D+ +WN MIS Y +   
Sbjct: 73  LHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGY 132

Query: 370 GRSAILAY-LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
               I  + L M S G++PD  TF S+L +   +     IH      G + ++ V+ +LI
Sbjct: 133 SSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFMWDVYVAASLI 192

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DE 487
             Y +   +  A  +F  M  R++ +WN +I+G+  +G   + L      L   LR  D 
Sbjct: 193 HLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALT-----LSDGLRAMDS 247

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   LS+C        G  IH Y +K+ L S++ + N +I LYA+ G L    +VF+ 
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDR 307

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG---- 603
           M  +D ISWN++I AY  + +   A+  F+ M+ + RI+PD  T  ++ S  S  G    
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAILLFQEMR-LSRIQPDCLTLISLASILSQLGEIRA 366

Query: 604 -------------LVDDGT------------RIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
                         ++D T             + DS    + ++P +D +S    + G A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYA 426

Query: 639 --GYLDEAERVIN-----SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
             G+  EA  + N        I A    W ++  AC+  G LR G  + G LL+
Sbjct: 427 QNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLK 480



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 127/254 (50%), Gaps = 10/254 (3%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           ++  + +HA + ++  I N+ +S  L++ Y     +  A   F ++  R++  WN +I+G
Sbjct: 67  LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126

Query: 462 FLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           +   G+  + ++ FS  ++S  L+PD  T    L +C  ++    G +IH   LK   + 
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMW 183

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +  ++I LY + G +  +  +F+ M  +D  SWNA+IS Y Q G  KEA++    ++
Sbjct: 184 DVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLR 243

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
            +     D  T  ++LSAC+ AG  + G  I    +  +G        + ++DL    G 
Sbjct: 244 AM-----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGS 297

Query: 641 LDEAERVINSQHIQ 654
           L + ++V +  +++
Sbjct: 298 LKDCQKVFDRMYVR 311



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 110/503 (21%), Positives = 206/503 (40%), Gaps = 105/503 (20%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKP-DIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  ++   +SG+ ++AL L      S  L+  D  ++ + L+AC    +   G  +H+Y+
Sbjct: 220 NAMISGYCQSGNAKEALTL------SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYS 273

Query: 84  LRAGLKAYPHVANTILSLYKN---------------ARDLVSVKRV-------------- 114
           ++ GL++   V+N ++ LY                  RDL+S   +              
Sbjct: 274 IKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAI 333

Query: 115 --FSEIQ----NPDVYSWTTFLS---------AC-------------------------- 133
             F E++     PD  +  +  S         AC                          
Sbjct: 334 LLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393

Query: 134 -TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL--DVRRDNY 190
             K+G VD A  VF+ +P++D+  +N +I+G  +NG+    I ++  M +   ++  +  
Sbjct: 394 YAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG 453

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           ++ SVL  C  AG L  G +LH  + K+G    V V  +L  MY  CG + DA  +F + 
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPR 305
                + + +N ++      G  E+A++ F++ML   ++P  +TFV+++SAC    L   
Sbjct: 514 PR--VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 571

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS-- 362
             +         G           + +Y   G+++ A      +  + D   W  ++S  
Sbjct: 572 GEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSAC 631

Query: 363 -TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGI 417
             +   +LG+ A     E     + P+   +  LL    AS+G  E V+ I +     G+
Sbjct: 632 RVHGNVDLGKIASEHLFE-----VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGL 686

Query: 418 -----ITNIQVSNALISAYAKNE 435
                 ++++V N +   Y  N+
Sbjct: 687 RKTPGWSSMEVDNKVEVFYTGNQ 709



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 7/198 (3%)

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++L+  K +H  ++ +N I  + +   ++ LY   G++  +   F+ +  +D  +WN +I
Sbjct: 65  TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y + G   E + CF        ++PD  TF +VL AC +   V DG +I   +   +G
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKI-HCLALKFG 180

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F+      + ++ L  R G +  A R++  +       +W A+ S     GN +    ++
Sbjct: 181 FMWDVYVAASLIHLYCRYGAVVNA-RILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLS 239

Query: 681 GLLLEREQDKPSVYVLLS 698
             L  R  D  +V  LLS
Sbjct: 240 DGL--RAMDSVTVVSLLS 255


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 219/729 (30%), Positives = 358/729 (49%), Gaps = 84/729 (11%)

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L AGL A   + N ++ LY  +       R F  +  P+VYS+   +SA  + G +  A 
Sbjct: 37  LAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAAR 96

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
           ++  +MPDR+   +N +I     +      + ++R M +  +   N++ ASVLS C A  
Sbjct: 97  DLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVA 156

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ GR+ H L  K G      V N L+ MY  CG+V DA ++F+       + +S+  M
Sbjct: 157 ALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSP--NEVSFTAM 214

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS----ACL-------CPRVGYQVH 311
           M GLA  G V++AL  F  M  +++R   +   SV+     AC          R+   +H
Sbjct: 215 MGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIH 274

Query: 312 AQAMKSG---------------------------FEAYTSVS----NAAITMYSSCG--- 337
           A  ++ G                           FE+ +SVS    N  +T Y   G   
Sbjct: 275 ALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYE 334

Query: 338 --------------------------------KIDEACMIFARLQEKDIVSWNTMISTYA 365
                                            +  A  +F ++ +  + +WNT++S Y 
Sbjct: 335 RALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYG 394

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQ 422
           Q  L +  I  +  MQ   ++PD  T   +L++    G +E+ + +H+      +  ++ 
Sbjct: 395 QEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMF 454

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V++ LI  Y+K  ++  A  IF+ M+ R+++ WN++I+G  ++    +    F ++  + 
Sbjct: 455 VASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENG 514

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + P E + +  ++SCAR+SS+  G+QIH  VLK+     + +G+++I +YAKCG++D + 
Sbjct: 515 MFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDAR 574

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
             FN MI K+ ++WN +I  YAQ+G G++AV  F+ M    + KPD  TF AVL+ CSH+
Sbjct: 575 LFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTT-KQKPDSVTFIAVLTGCSHS 633

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD+    F+SM ++YG  P  +H +C++D LGRAG   E   VI+    +  +  W  
Sbjct: 634 GLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEV 693

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L +AC  H N  LG   A  L   +   PS YVLLSNIYA  G   +A+ +R L+   GV
Sbjct: 694 LLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGV 753

Query: 723 IKQPGCSWI 731
           +K  G SW+
Sbjct: 754 VKGRGYSWV 762



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 219/487 (44%), Gaps = 61/487 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN--------LRNAAFGNQL 79
           +  L++SG   DAL LF ++ S   ++ D  ++S+ L ACA          R       +
Sbjct: 215 MGGLAQSGAVDDALRLFARM-SRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSI 273

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           HA  +R G  +  HV N+++ +Y     +    +VF  + +  + SW   ++   ++G  
Sbjct: 274 HALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCY 333

Query: 140 DYACEVFDKMPD--------------------RDLP---------------VYNAMITGC 164
           + A EV D M +                    RD+P                +N +++G 
Sbjct: 334 ERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGY 393

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLV 223
            +       I LFR M   +V+ D  + A +LS C   G+LE G+Q+HS   K      +
Sbjct: 394 GQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDM 453

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
            V + LI MY  CG V  A  +F        D + +N M+ GLA     EEA   F+ M 
Sbjct: 454 FVASGLIDMYSKCGQVGIAQIIFNMMTER--DVVCWNSMISGLAIHSLNEEAFDFFKQMR 511

Query: 284 VASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
              + P+E ++ S++++C      P+ G Q+HAQ +K G++    V ++ I MY+ CG +
Sbjct: 512 ENGMFPTESSYASMINSCARLSSIPQ-GRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNM 570

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           D+A + F  +  K+IV+WN MI  YAQ   G  A+  +  M +   +PD  TF ++L   
Sbjct: 571 DDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 630

Query: 400 GFIEMVEMIHAFVFINGIITN------IQVSNALISAYAKNERIKQAYQIFHNMSPR-NI 452
               +V+   A  + N + +N      ++    LI A  +  R  +   +   M  + + 
Sbjct: 631 SHSGLVD--EAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDA 688

Query: 453 ITWNTLI 459
           I W  L+
Sbjct: 689 ILWEVLL 695



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 35/299 (11%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           R + +  A     SK  +   N  L+   +   +QD + LF ++     ++PD  +L+  
Sbjct: 366 RDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQH-QNVQPDRTTLAVI 424

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+ C+ L     G Q+H+ +++  L     VA+ ++ +Y     +   + +F+ +   DV
Sbjct: 425 LSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDV 484

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
             W +                               MI+G   +   +     F++M + 
Sbjct: 485 VCWNS-------------------------------MISGLAIHSLNEEAFDFFKQMREN 513

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            +     S+AS+++ C     +  GRQ+H+ V K G+   V V ++LI MY  CGN+ DA
Sbjct: 514 GMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDA 573

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
              F      V + +++N M+ G A  G  E+A+  F  ML    +P  +TF++V++ C
Sbjct: 574 RLFFNCM--IVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGC 630


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 209/640 (32%), Positives = 354/640 (55%), Gaps = 30/640 (4%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RV     + D+Y  +  +SA  + G +D A +++  + +R+    N +I G  +  + + 
Sbjct: 303 RVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEA 362

Query: 173 GIGLF---REMHKLDVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSG-FSCLVS 224
              +F   R+   ++V  D Y    S  +  S  + GL + GR++H+ V ++G     ++
Sbjct: 363 AAEIFMGARDSAAVNV--DTYVVLLSAIAEFSTAEQGLRK-GREVHAHVLRAGHIYRKIA 419

Query: 225 VVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
           V N L+ MY  CG +  AC+VF+  EA+    D IS+N ++  L   G  E A++ +  M
Sbjct: 420 VSNGLVNMYAKCGAIDKACRVFQLMEAR----DRISWNTIITALDQNGYCEAAMMNYCLM 475

Query: 283 LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
              S+ PS    +S +S+C        G Q+H  A+K G    TSVSNA + MY  CG++
Sbjct: 476 RQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRM 535

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLG-RSAILAYLEMQSVGIRPDEFTFGSLLAS 398
            E   IF  +   D+VSWN+++   A        ++  +  M   G+ P++ TF + LA+
Sbjct: 536 SECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAA 595

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIIT 454
              + ++E+   IH+ +  +G+  +  V NAL+S YAK+  +    ++F  MS R + I+
Sbjct: 596 LTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAIS 655

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN++I+G++ NG   + +     ++ SE   D  T S+ L++CA +++L  G ++H + L
Sbjct: 656 WNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGL 715

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           +++L S + + +A++ +Y+KCG +D + +VF+ M +K+  SWN++IS YA+HG G++A+ 
Sbjct: 716 RSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALE 775

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F+ MQ+ G   PD  TF +VLSACSHAGLV+ G   F+ ++ DYG +P  +H SC++DL
Sbjct: 776 IFEEMQESGE-SPDHVTFVSVLSACSHAGLVERGLDYFE-LMEDYGILPRIEHYSCVIDL 833

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAA---HGNLRLGRIIAGLLLEREQDKP 691
           LGRAG LD+ +  +    ++  +  W  +  AC        + LG   + +LLE E   P
Sbjct: 834 LGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNP 893

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             YVL S  +AA G WE+ A  R  +K   V K+ G SW+
Sbjct: 894 VNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWV 933



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 296/636 (46%), Gaps = 64/636 (10%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH   ++ GL     +AN +++ Y     L + +RVF  +   +  SWT  +S     GH
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLIS-----GH 141

Query: 139 VDYACEVFDKMPDRDLPVYNAMI---TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                 V   +P+   P++ AM+    GC                     R  +++F SV
Sbjct: 142 ------VLSGLPEDAFPLFRAMLREGPGC---------------------RPTSFTFGSV 174

Query: 196 LSVC-DAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC--GNVVDACKVFEEAK 250
           L  C D+G   L F  Q+H LV+K+ F+   +V NALI+MY +C  G  + A +VF+   
Sbjct: 175 LRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTP 234

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASLRPSELTFVSVMSACLCPRV 306
             V D I++N +M   A  G        FR M        LRP+E TF S+++A      
Sbjct: 235 --VRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSC 292

Query: 307 GY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
                 Q+  + +KSG  +   V +A ++ ++  G +DEA  I+  L+E++ V+ N +I+
Sbjct: 293 SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIA 352

Query: 363 TYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVEM-------IHAFVFI 414
              ++  G +A   ++  + S  +  D  T+  LL++       E        +HA V  
Sbjct: 353 GLVKQQHGEAAAEIFMGARDSAAVNVD--TYVVLLSAIAEFSTAEQGLRKGREVHAHVLR 410

Query: 415 NG-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            G I   I VSN L++ YAK   I +A ++F  M  R+ I+WNT+I     NG+    + 
Sbjct: 411 AGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMM 470

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
           ++  +  + + P  +     LSSCA +  L  G+Q+H   +K  L    S+ NA++ +Y 
Sbjct: 471 NYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYG 530

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYA-QHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           +CG +     +FN M   D +SWN+++   A       E+V  F  M   G + P++ TF
Sbjct: 531 ECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNMMKSGLV-PNKVTF 589

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
              L+A +   +++ G +I   M+  +G        + ++    ++G +D  ER+ +   
Sbjct: 590 VNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMS 648

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
            +  + +W ++ S    +G+L+       L++  EQ
Sbjct: 649 GRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQ 684



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 150/560 (26%), Positives = 262/560 (46%), Gaps = 52/560 (9%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA----FGN 77
           + LN  +A L +  H + A  +F+    S  +  D Y +   L+A A    A      G 
Sbjct: 345 VTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV--LLSAIAEFSTAEQGLRKGR 402

Query: 78  QLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           ++HA+ LRAG +     V+N ++++Y     +    RVF  ++  D  SW          
Sbjct: 403 EVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISW---------- 452

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                N +IT   +NGY +  +  +  M +  +   N++  S L
Sbjct: 453 ---------------------NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGL 491

Query: 197 SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C   GLL  G+QLH    K G     SV NAL+ MY  CG + +  ++F     +  D
Sbjct: 492 SSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAH--D 549

Query: 256 HISYNVMMDGLASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQV 310
            +S+N +M  +AS    + E++  F +M+ + L P+++TFV+ ++A L P     +G Q+
Sbjct: 550 VVSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAA-LTPLSVLELGKQI 608

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNL 369
           H+  +K G     +V NA ++ Y+  G +D    +F+R+   +D +SWN+MIS Y     
Sbjct: 609 HSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGH 668

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
            + A+     M       D  TF  +L   AS   +E    +HAF   + + +++ V +A
Sbjct: 669 LQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESA 728

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  Y+K  RI  A ++FH+MS +N  +WN++I+G+  +G   + L+ F E+  S   PD
Sbjct: 729 LVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPD 788

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             T    LS+C+    +  G      +    ++ ++   + +I L  + G+LD       
Sbjct: 789 HVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMK 848

Query: 547 MM-IEKDTISWNALISAYAQ 565
            M ++ +T+ W  ++ A  Q
Sbjct: 849 RMPMKPNTLIWRTVLVACQQ 868



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 141/479 (29%), Positives = 238/479 (49%), Gaps = 41/479 (8%)

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           CDA        LH  V K G +  + + N L+  Y     +  A +VF+   G   + +S
Sbjct: 80  CDAS----PESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGR--NAVS 133

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSACL---CPRVGY--QVH 311
           +  ++ G    G  E+A   FR ML      RP+  TF SV+ AC      R+G+  QVH
Sbjct: 134 WTCLISGHVLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVH 193

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSC--GKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
               K+ F + T+V NA I+MY SC  G    A  +F     +D+++WN ++S YA+R  
Sbjct: 194 GLVSKTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGD 253

Query: 370 GRSAILAYLEMQ----SVGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNI 421
                  +  MQ     + +RP E TFGSL+     SS  + +++ +   V  +G  +++
Sbjct: 254 AICTFTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDL 313

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM- 480
            V +AL+SA+A++  + +A  I+  +  RN +T N LI G +      Q  +  +E+ M 
Sbjct: 314 YVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQ----QHGEAAAEIFMG 369

Query: 481 ----SELRPDEYTLSVALSSCARISS----LRHGKQIHGYVLK-NNLISKMSLGNAMITL 531
               + +  D Y   V LS+ A  S+    LR G+++H +VL+  ++  K+++ N ++ +
Sbjct: 370 ARDSAAVNVDTYV--VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNM 427

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG +D + RVF +M  +D ISWN +I+A  Q+G  + A+  +  M+    I P    
Sbjct: 428 YAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQ-NSIGPSNFA 486

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             + LS+C+  GL+  G ++    V  +G        + ++ + G  G + E   + NS
Sbjct: 487 AISGLSSCAGLGLLAAGQQLHCDAVK-WGLYLDTSVSNALVKMYGECGRMSECWEIFNS 544



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 168/367 (45%), Gaps = 60/367 (16%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  V   G+  ++ ++N L+++YAK  R+  A ++F  M  RN ++W  LI+G +L+
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 466 GFPVQGLQHFSELLMS--ELRPDEYTLSVALSSCARISSLRHG--KQIHGYVLKNNLISK 521
           G P      F  +L      RP  +T    L +C      R G   Q+HG V K    S 
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 522 MSLGNAMITLYAKC--GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            ++ NA+I++Y  C  G    + RVF+    +D I+WNAL+S YA+ G+     + F+AM
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 580 Q--DVG-RIKPDQATFTAV-----LSACSHAGLVDD-GTRIFDSMVNDYGFIPAEDHLSC 630
           Q  D G  ++P + TF ++     LS+CS  GL+D    R+  S  +   ++      S 
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLLDQLFVRVLKSGCSSDLYVG-----SA 318

Query: 631 MLDLLGRAGYLDEAERV-------------------INSQHIQARS-------------- 657
           ++    R G LDEA+ +                   +  QH +A +              
Sbjct: 319 LVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNV 378

Query: 658 DNWWALFSACA----AHGNLRLGRIIAGLLLEREQ--DKPSVYVLLSNIYAAAGLWEEAA 711
           D +  L SA A    A   LR GR +   +L       K +V   L N+YA  G  ++A 
Sbjct: 379 DTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKAC 438

Query: 712 NIRELLK 718
            + +L++
Sbjct: 439 RVFQLME 445


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/554 (34%), Positives = 302/554 (54%), Gaps = 16/554 (2%)

Query: 188 DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D++ +  VL  C     L   +Q+H  + KS       V+N L+ +Y  CG + +A  VF
Sbjct: 27  DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86

Query: 247 E---EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
           +   +  G      S+N M+ G       E+A+  FR+M    ++P+  T++ ++ AC  
Sbjct: 87  DALVKKSG-----ASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACAS 141

Query: 303 --CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               + G +VHA     G E+   V  A + MY  CG I+EA  IF  L   DI+SW  M
Sbjct: 142 LSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVM 201

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           I  YAQ   G+ A    L+M+  G +P+  T+ S+L   AS G ++ V+ +H      G+
Sbjct: 202 IGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGL 261

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             +++V  AL+  YAK+  I  A  +F  M  R++++WN +I  F  +G   +    F +
Sbjct: 262 ELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQ 321

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +     +PD       L++CA   +L   K+IH + L + L   + +G A++ +Y+K G 
Sbjct: 322 MQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGS 381

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D +  VF+ M  ++ +SWNA+IS  AQHG G++A+  F+ M   G +KPD+ TF AVLS
Sbjct: 382 IDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHG-VKPDRVTFVAVLS 440

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSHAGLVD+G   + +M   YG  P   H +CM+DLLGRAG L EA+  I++  +    
Sbjct: 441 ACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDE 500

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W AL  +C  +GN+ LG ++A   L+ +    + YVLLSNIYA AG W+  + +R ++
Sbjct: 501 ATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMM 560

Query: 718 KRTGVIKQPGCSWI 731
           +  G+ K+PG SWI
Sbjct: 561 RERGIRKEPGRSWI 574



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 246/483 (50%), Gaps = 31/483 (6%)

Query: 106 RDLVSVKRVFSEI------QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           +DL++ K+V   I      QN  V +    L    + G +  A  VFD +  +    +NA
Sbjct: 42  KDLMAAKQVHDCIIKSRMEQNAHVMN--NLLHVYIECGRLQEARCVFDALVKKSGASWNA 99

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG 218
           MI G  E+ + +  + LFREM    V+ +  ++  +L  C +   L++G+++H+ +   G
Sbjct: 100 MIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGG 159

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
               V V  AL+ MY  CG++ +A ++F+    +  D IS+ VM+   A  G  +EA   
Sbjct: 160 LESDVRVGTALLRMYGKCGSINEARRIFDNLMNH--DIISWTVMIGAYAQSGNGKEAYRL 217

Query: 279 FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
              M     +P+ +T+VS+++AC      +   +VH  A+ +G E    V  A + MY+ 
Sbjct: 218 MLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAK 277

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
            G ID+A ++F R++ +D+VSWN MI  +A+   G  A   +L+MQ+ G +PD   F S+
Sbjct: 278 SGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSI 337

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L   AS+G +E V+ IH     +G+  +++V  AL+  Y+K+  I  A  +F  M  RN+
Sbjct: 338 LNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNV 397

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK----- 507
           ++WN +I+G   +G     L+ F  +    ++PD  T    LS+C+    +  G+     
Sbjct: 398 VSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLA 457

Query: 508 --QIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYA 564
             Q++G      +   +S  N M+ L  + G L +  L + NM ++ D  +W AL+ +  
Sbjct: 458 MTQVYG------IEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCR 511

Query: 565 QHG 567
            +G
Sbjct: 512 TYG 514



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 218/484 (45%), Gaps = 51/484 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A      H +DA+ LF ++     ++P+  +    L ACA+L    +G ++HA   
Sbjct: 98  NAMIAGYVEHKHAEDAMRLFREM-CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL++   V   +L +Y     +   +R+F  + N D+ SWT  + A  + G       
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG------- 209

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                 NG E     L  +M +   + +  ++ S+L+ C + G 
Sbjct: 210 ----------------------NGKE--AYRLMLQMEQEGFKPNAITYVSILNACASEGA 245

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L++ +++H     +G    V V  AL+ MY   G++ DA  VF+  K  V D +S+NVM+
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK--VRDVVSWNVMI 303

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
              A  GR  EA   F  M     +P  + F+S+++AC          ++H  A+ SG E
Sbjct: 304 GAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLE 363

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A + MYS  G ID+A ++F R++ +++VSWN MIS  AQ  LG+ A+  +  M
Sbjct: 364 VDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRM 423

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNER 436
            + G++PD  TF ++L++     +V+       A   + GI  ++   N ++    +  R
Sbjct: 424 TAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGR 483

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYTLSV 492
           + +A     NM+   +  TW     G LL      G     EL+  E   L P      V
Sbjct: 484 LMEAKLFIDNMAVDPDEATW-----GALLGSCRTYGNVELGELVAKERLKLDPKNAATYV 538

Query: 493 ALSS 496
            LS+
Sbjct: 539 LLSN 542



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 116/232 (50%), Gaps = 12/232 (5%)

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L   L  D +     L  C +   L   KQ+H  ++K+ +     + N ++ +Y +CG L
Sbjct: 20  LQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRL 79

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +  VF+ +++K   SWNA+I+ Y +H   ++A+  F+ M   G ++P+  T+  +L A
Sbjct: 80  QEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEG-VQPNAGTYMIILKA 138

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARS 657
           C+    +  G  +   +   +G + ++  + + +L + G+ G ++EA R+ ++  +    
Sbjct: 139 CASLSALKWGKEVHACI--RHGGLESDVRVGTALLRMYGKCGSINEARRIFDNL-MNHDI 195

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KPS--VYVLLSNIYAAAG 705
            +W  +  A A  GN   G+    L+L+ EQ+  KP+   YV + N  A+ G
Sbjct: 196 ISWTVMIGAYAQSGN---GKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 221/743 (29%), Positives = 365/743 (49%), Gaps = 90/743 (12%)

Query: 11  AGNSNTSKELL--------LKLNISLANLSRS-GHYQDALHLFVQIHSSHKLKPDIYSLS 61
           AG+ + +++LL        +  N  ++ L+RS G   +A+ ++ ++ +   L P  ++L+
Sbjct: 87  AGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRA-EGLLPTHFTLA 145

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           + L+AC  L     G + H  A++ GL A   V N +L +Y                   
Sbjct: 146 SVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMY------------------- 186

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                       TK G V  A  +F  M   +   + AM+ G  + G  D  + LF  M 
Sbjct: 187 ------------TKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMC 234

Query: 182 KLDVRRDNYSFASVLSVCD---------AGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +  V  D  S +SVL  C          A     G+ +H+LV + GF     V N+LI M
Sbjct: 235 RSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDM 294

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C  + +A KVFE         +S+N+++ G    G   +A+     M  A   P+E+
Sbjct: 295 YTKCVEMDEAVKVFESLPSVTI--VSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEV 352

Query: 293 TFVSVMSACLCPRVGYQVH-AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           T+ +++++C+  R    VH A+AM                              F ++  
Sbjct: 353 TYSNLLASCIKAR---DVHSARAM------------------------------FDKISR 379

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMI 408
             + +WNT++S Y Q    +  I  +  MQ   ++PD  T   +L+S    G ++    +
Sbjct: 380 PSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQV 439

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+      +  ++ V++ L+  Y+K  +I  A  IF+ M+ R+++ WN++I+G  ++   
Sbjct: 440 HSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLN 499

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            +    F ++  + + P E + +  ++SC+R+SS+ HG+QIH  V+K+     + +G+A+
Sbjct: 500 KEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSAL 559

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           I +YAKCG++D +   F+ M+ K+ ++WN +I  YAQ+G G +AV  F+ M    + KPD
Sbjct: 560 IDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQ-KPD 618

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             TF AVL+ CSH+GLVD     F+SM N YG IP  +H +C++D LGRAG   E E +I
Sbjct: 619 AVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALI 678

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
           +    +     W  L +AC  H N  LG+  A  L   +   PS YVLLSNIYA+ G   
Sbjct: 679 HKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHG 738

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +A+ +R L+   GV+K  G SWI
Sbjct: 739 DASAVRALMSNRGVVKGRGYSWI 761



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 159/566 (28%), Positives = 273/566 (48%), Gaps = 51/566 (9%)

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +AN ++ LY  A         F  + +P+ YS+   LSA  + G +D A ++   MP R+
Sbjct: 45  LANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRN 104

Query: 154 LPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQL 210
              +N +I+    + G     + ++  M    +   +++ ASVLS C  GL  L  GR+ 
Sbjct: 105 AVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSAC-GGLAALGDGRRC 163

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H +  K G      V NAL+ MY  CG+V DA ++F        + +S+  MM GLA  G
Sbjct: 164 HGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARP--NEVSFTAMMGGLAQTG 221

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCP---------RVGYQVHAQAMKSGF 319
            +++AL  F  M  + +    ++  SV+ AC   C          R+G  +HA  ++ GF
Sbjct: 222 SIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGF 281

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   V N+ I MY+ C ++DEA  +F  L    IVSWN +I+ + Q      A+     
Sbjct: 282 GSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSL 341

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           MQ  G  P+E T+ +LLAS                                  K   +  
Sbjct: 342 MQEAGFEPNEVTYSNLLASC--------------------------------IKARDVHS 369

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F  +S  ++ TWNTL++G+         ++ F  +    ++PD  TL+V LSSC++
Sbjct: 370 ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSK 429

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +  L  G+Q+H   ++  L + M + + ++ +Y+KCG +  +  +FN M E+D + WN++
Sbjct: 430 LGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSI 489

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           IS    H   KEA   FK M++ G I P ++++ +++++CS    +  G +I   ++ D 
Sbjct: 490 ISGLTIHSLNKEAFDFFKQMRENG-IMPTESSYASMINSCSRLSSIPHGRQIHAQVMKD- 547

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAE 645
           G+       S ++D+  + G +D+A 
Sbjct: 548 GYDQNVYVGSALIDMYAKCGNMDDAR 573



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 45/301 (14%)

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
           N ++  Y++  L R A+LA+  + S    P+++++                         
Sbjct: 47  NRLVELYSRAGLPRHALLAFRALPS----PNDYSY------------------------- 77

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN-GFPVQGLQHFS 476
                  NA +SA  +   +  A  +   M  RN ++WNT+I+    + G   + ++ + 
Sbjct: 78  -------NAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYG 130

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +    L P  +TL+  LS+C  +++L  G++ HG  +K  L +   + NA++ +Y KCG
Sbjct: 131 RMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCG 190

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  ++R+F  M   + +S+ A++   AQ G   +A+  F  M   G +  D  + ++VL
Sbjct: 191 SVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSG-VPVDPVSVSSVL 249

Query: 597 SACSHAGLVD-DGTRIF------DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            AC+ A   D    R F       ++V   GF   +   + ++D+  +   +DEA +V  
Sbjct: 250 GACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFE 309

Query: 650 S 650
           S
Sbjct: 310 S 310


>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
 gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
          Length = 688

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 213/688 (30%), Positives = 360/688 (52%), Gaps = 59/688 (8%)

Query: 56  DIYSLSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           D  +L   L AC  +L+    G Q+H ++  +G  ++  V+N ++ +Y+ A         
Sbjct: 2   DEVTLCLALKACRGDLKR---GCQIHGFSTTSGFTSFVCVSNAVMGMYRKA--------- 49

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G  D A  +F+ + D D+  +N +++G  +N    I +
Sbjct: 50  ----------------------GRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIAL 84

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
                M    V  D +++++ LS C    G L  G QL S V K+G    + V N+ ITM
Sbjct: 85  NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFITM 143

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSE 291
           Y   G+   A +VF+E      D IS+N ++ GL+  G    EA++ FRDM+   +    
Sbjct: 144 YSRSGSFRGARRVFDEMS--FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 201

Query: 292 LTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           ++F SV++ C      ++  Q+H   +K G+E+   V N  ++ YS CG ++    +F +
Sbjct: 202 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 261

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
           + E+++VSW TMIS+         A+  +L M+  G+ P+E TF  L+ +    E ++  
Sbjct: 262 MSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 316

Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             IH      G ++   V N+ I+ YAK E ++ A + F +++ R II+WN +I+GF  N
Sbjct: 317 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 376

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMS 523
           GF  + L+ F     +E  P+EYT    L++ A     S++ G++ H ++LK  L S   
Sbjct: 377 GFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 435

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A++ +YAK G++D S +VFN M +K+   W ++ISAY+ HG+ +  ++ F  M    
Sbjct: 436 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK-E 494

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            + PD  TF +VL+AC+  G+VD G  IF+ M+  Y   P+ +H SCM+D+LGRAG L E
Sbjct: 495 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 554

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           AE +++            ++  +C  HGN+++G  +A L +E + +    YV + NIYA 
Sbjct: 555 AEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAE 614

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
              W++AA IR+ +++  V K+ G SWI
Sbjct: 615 KEEWDKAAEIRKAMRKKNVSKEAGFSWI 642



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 250/512 (48%), Gaps = 51/512 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q AL+  V++ S+  +  D ++ ST L+ C        G QL +  ++ GL++   V N+
Sbjct: 81  QIALNFVVRMKSA-GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNS 139

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
            +++Y  +      +RVF E+   D+ SW + LS  ++ G                    
Sbjct: 140 FITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF------------------ 181

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTK 216
                     G+E + I  FR+M +  V  D+ SF SV++  C    L+  RQ+H L  K
Sbjct: 182 ----------GFEAVVI--FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK 229

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACK-VFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            G+  L+ V N L++ Y  CG V++A K VF +      + +S+  M+         ++A
Sbjct: 230 RGYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSER--NVVSWTTMIS-----SNKDDA 281

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F +M    + P+E+TFV +++A  C    + G ++H   +K+GF +  SV N+ IT+
Sbjct: 282 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 341

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+    +++A   F  +  ++I+SWN MIS +AQ      A+  +L   +  + P+E+TF
Sbjct: 342 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 400

Query: 393 GSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           GS+L +  F E +     +  HA +   G+ +   VS+AL+  YAK   I ++ ++F+ M
Sbjct: 401 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 460

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           S +N   W ++I+ +  +G     +  F +++   + PD  T    L++C R   +  G 
Sbjct: 461 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 520

Query: 508 QIHGYVLK-NNLISKMSLGNAMITLYAKCGDL 538
           +I   +++  NL       + M+ +  + G L
Sbjct: 521 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 552


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 367/723 (50%), Gaps = 47/723 (6%)

Query: 30  NLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           +L+ +G++  AL     I  +S + + D  +L   + + A LR+A     +HA ALR GL
Sbjct: 31  SLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGL 90

Query: 89  --KAYPHVANTILSLYKNARDLVSVKRVFSEIQNP--DVYSWTTFLSACTKMGHVDYACE 144
             +  P VAN +L+ Y     L +   VF  I +   D  S+ + +SA       D+A  
Sbjct: 91  LHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALA 150

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
               M     P+ +  +            + + R +  L                 A  +
Sbjct: 151 ALRAMLAGGHPLTSFTL------------VSVLRAVSHLPA--------------AAAAV 184

Query: 205 EFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             GR+ H+   K+G          NAL++MY   G V DA ++F  A     D +++N M
Sbjct: 185 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 244

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG- 318
           +  L   G  +EA+    DM+   +RP  +TF S + AC       VG ++HA  +K   
Sbjct: 245 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 304

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILA 376
             A + V++A + MY++  ++ +A  +F  + +  K +  WN MI  YAQ  +   A+  
Sbjct: 305 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 364

Query: 377 YLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYA 432
           +  M++  G  P E T  S+L +    E     E +H +V   G+  N  V NAL+  YA
Sbjct: 365 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 424

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYT 489
           +  +   A +IF  +   ++++WNTLI G ++ G      Q   E+   E   + P+  T
Sbjct: 425 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 484

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   L  CA +++   GK+IHGY +++ L + +++G+A++ +YAKCG L  S  VF+ + 
Sbjct: 485 LMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 544

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++TI+WN LI AY  HG G EA   F  M   G  +P++ TF A L+ACSH+G+VD G 
Sbjct: 545 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 604

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACA 668
           ++F +M  D+G  P  D L+C++D+LGRAG LDEA  ++ S    + +   W  +  AC 
Sbjct: 605 QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACR 664

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H N+ LG I    LLE E ++ S YVLL NIY+AAG W  AA +R  ++R GV K+PGC
Sbjct: 665 LHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGC 724

Query: 729 SWI 731
           SWI
Sbjct: 725 SWI 727



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 208/459 (45%), Gaps = 52/459 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L +SG + +A+     +  +  ++PD  + ++ L AC+ L     G ++HAY +
Sbjct: 242 NTMVSVLVQSGMFDEAVQTLYDM-VALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 300

Query: 85  RAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   L A   VA+ ++ +Y                                    V  A 
Sbjct: 301 KDDELAANSFVASALVDMYATHE-------------------------------QVGKAR 329

Query: 144 EVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCD 200
           +VFD +PD  + L ++NAMI G  + G ++  + LF  M  +        + ASVL  C 
Sbjct: 330 QVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 389

Query: 201 AGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
                 G++ +H  V K G +    V NAL+ MY   G    A ++F  A   + D +S+
Sbjct: 390 RSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF--AMVDLPDVVSW 447

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           N ++ G    G V +A    R+M       + P+ +T ++++  C     P  G ++H  
Sbjct: 448 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 507

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A++   +   +V +A + MY+ CG +  +  +F RL  ++ ++WN +I  Y    LG  A
Sbjct: 508 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEA 567

Query: 374 ILAYLEMQSVG-IRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALI 428
            + +  M + G  RP+E TF + LA+   SG ++  +++ HA    +G+     +   ++
Sbjct: 568 TVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 627

Query: 429 SAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLN 465
               +  R+ +AY +  +M    + +  W+T++    L+
Sbjct: 628 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 666


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 219/704 (31%), Positives = 361/704 (51%), Gaps = 42/704 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G+ + AL  F++   +   K + Y L++ + AC        G+Q+H+Y +++G       
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSG------- 172

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
                               F E    DVY  T+ +    K G +D A  VFD +  +  
Sbjct: 173 --------------------FGE----DVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTP 208

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
             + A+ITG T++G  ++ + LF  M + +V  D Y  +S+L+ C   G L+ G+Q+H+ 
Sbjct: 209 VTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAY 268

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V +S     VS  N LI  Y  CG V     +F+     V + IS+  M+ G        
Sbjct: 269 VLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLD--VKNIISWTTMIAGYMQNSYDW 326

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           EA+    +M     +P E    SV+++C        G Q+H+  +K   E    V+NA I
Sbjct: 327 EAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALI 386

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MYS C  +D+A  +F  +    +V +N MI  Y+++     A+  + EM+   + P   
Sbjct: 387 DMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFL 446

Query: 391 TF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           TF     L A+   +++ + IH  +   G   +   S+ALI  Y+K   I+ A  +F   
Sbjct: 447 TFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGT 506

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           + ++I+ WN+L +G+ L     +  + +S+L +S  RP+E+T +   ++ + ++SL HG+
Sbjct: 507 TNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQ 566

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q H  V+K  L S   + NA++ +YAKCG ++ + ++F+  + KDT  WN++IS YAQHG
Sbjct: 567 QFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHG 626

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
           + +EA+  F+ M     I P+  TF +VLSACSH G V+DG + ++SM   YG  P  +H
Sbjct: 627 KVEEALRMFETMVS-NNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEH 684

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
            + ++ LLGRAG L EA   I    I+  +  W +L SAC   GN+ L +  A + +  +
Sbjct: 685 YASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISID 744

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                 YV+LSNI+A+ G+W +   +R  +   GV+K+PG SWI
Sbjct: 745 PMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWI 788



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 161/564 (28%), Positives = 284/564 (50%), Gaps = 19/564 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV+     L +  K+G V  A  +FDKMP+R+L  ++++++  T+ GY +  +  F E  
Sbjct: 74  DVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQ 133

Query: 182 KLDVRRDN-YSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +  V + N Y  AS++  C   D G  E G Q+HS V KSGF   V V  +L+ +Y   G
Sbjct: 134 RTCVDKLNEYILASIIRACVQRDGG--EPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHG 191

Query: 238 NVVDACKVFEEAKGYVCD-HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
            +  A  VF+   G V    +++  ++ G    GR E +L  F  M+ +++ P +    S
Sbjct: 192 EIDKARLVFD---GLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSS 248

Query: 297 VMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           +++AC      + G Q+HA  ++S  +   S  N  I  Y+ CG++     +F RL  K+
Sbjct: 249 ILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKN 308

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHA 410
           I+SW TMI+ Y Q +    A+    EM  +G +PDE+   S+L S G ++ ++    IH+
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +V    +  +  V+NALI  Y+K   +  A ++F  ++  +++ +N +I G+   G+   
Sbjct: 369 YVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCG 428

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F E+ +  + P   T    L   A +  L+  KQIHG ++K          +A+I 
Sbjct: 429 ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALID 488

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KC  +  +  VF     KD + WN+L S Y    + +EA   +  +Q + R +P++ 
Sbjct: 489 VYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQ-LSRERPNEF 547

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF A+ +A S    +  G + F + V   G        + ++D+  + G ++EAE++ +S
Sbjct: 548 TFAALTTAASILASLPHGQQ-FHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS 606

Query: 651 QHIQARSDNWWALFSACAAHGNLR 674
             +   +  W ++ S  A HG + 
Sbjct: 607 S-VWKDTACWNSMISMYAQHGKVE 629



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 248/506 (49%), Gaps = 21/506 (4%)

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           + R++H  V   G    V + N L+  YF  G+V DA  +F++      + +S++ ++  
Sbjct: 58  YYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNR--NLVSWSSVVSM 115

Query: 266 LASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
              +G  E+AL+ F +     + + +E    S++ AC+       G QVH+  +KSGF  
Sbjct: 116 YTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGE 175

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V  + + +Y+  G+ID+A ++F  L  K  V+W  +I+ Y +      ++  +  M 
Sbjct: 176 DVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMM 235

Query: 382 SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              + PD++   S+L +    G+++  + IHA+V  +    ++   N LI  Y K  R+K
Sbjct: 236 ESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVK 295

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
               +F  +  +NII+W T+I G++ N +  + ++   E+     +PDEY  S  L+SC 
Sbjct: 296 AGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCG 355

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + +L+HG+QIH YV+K  L     + NA+I +Y+KC  LD + RVF+++     + +NA
Sbjct: 356 SVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNA 415

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I  Y++ G    A+  F+ M+ +  + P   TF ++L   +    +    +I   ++  
Sbjct: 416 MIEGYSRQGYLCGALEVFQEMR-LKHVSPSFLTFVSLLGLSAALLCLQLSKQI-HGLIIK 473

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG-- 676
           YGF   +   S ++D+  +   + +A  V            W +LFS      NL+L   
Sbjct: 474 YGFSLDKFTSSALIDVYSKCSCIRDARYVFEGT-TNKDIVVWNSLFSGY----NLQLKSE 528

Query: 677 ---RIIAGLLLEREQDKPSVYVLLSN 699
              ++ + L L RE+     +  L+ 
Sbjct: 529 EAFKLYSDLQLSRERPNEFTFAALTT 554



 Score = 45.8 bits (107), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 7/207 (3%)

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           S+ + +++H  V+   L   + L N ++  Y K G +  +  +F+ M  ++ +SW++++S
Sbjct: 55  SILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVS 114

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y Q G  ++A+  F   Q     K ++    +++ AC      + G+++   ++   GF
Sbjct: 115 MYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKS-GF 173

Query: 622 IPAEDHL--SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
              ED    + ++ L  + G +D+A  V +   ++     W A+ +     G   +   +
Sbjct: 174 --GEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPV-TWTAIITGYTKSGRSEVSLQL 230

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGL 706
             L++E     P  YVL S + A + L
Sbjct: 231 FNLMMESNV-IPDKYVLSSILNACSVL 256


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 367/723 (50%), Gaps = 47/723 (6%)

Query: 30  NLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           +L+ +G++  AL     I  +S + + D  +L   + + A LR+A     +HA ALR GL
Sbjct: 29  SLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGL 88

Query: 89  --KAYPHVANTILSLYKNARDLVSVKRVFSEIQNP--DVYSWTTFLSACTKMGHVDYACE 144
             +  P VAN +L+ Y     L +   VF  I +   D  S+ + +SA       D+A  
Sbjct: 89  LHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALA 148

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
               M     P+ +  +            + + R +  L                 A  +
Sbjct: 149 ALRAMLAGGHPLTSFTL------------VSVLRAVSHLPA--------------AAAAV 182

Query: 205 EFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             GR+ H+   K+G          NAL++MY   G V DA ++F  A     D +++N M
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG- 318
           +  L   G  +EA+    DM+   +RP  +TF S + AC       VG ++HA  +K   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILA 376
             A + V++A + MY++  ++ +A  +F  + +  K +  WN MI  YAQ  +   A+  
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362

Query: 377 YLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYA 432
           +  M++  G  P E T  S+L +    E     E +H +V   G+  N  V NAL+  YA
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 422

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYT 489
           +  +   A +IF  +   ++++WNTLI G ++ G      Q   E+   E   + P+  T
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 482

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   L  CA +++   GK+IHGY +++ L + +++G+A++ +YAKCG L  S  VF+ + 
Sbjct: 483 LMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++TI+WN LI AY  HG G EA   F  M   G  +P++ TF A L+ACSH+G+VD G 
Sbjct: 543 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 602

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACA 668
           ++F +M  D+G  P  D L+C++D+LGRAG LDEA  ++ S    + +   W  +  AC 
Sbjct: 603 QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACR 662

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H N+ LG I    LLE E ++ S YVLL NIY+AAG W  AA +R  ++R GV K+PGC
Sbjct: 663 LHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGC 722

Query: 729 SWI 731
           SWI
Sbjct: 723 SWI 725



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 208/459 (45%), Gaps = 52/459 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L +SG + +A+     +  +  ++PD  + ++ L AC+ L     G ++HAY +
Sbjct: 240 NTMVSVLVQSGMFDEAVQTLYDM-VALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 85  RAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   L A   VA+ ++ +Y                                    V  A 
Sbjct: 299 KDDELAANSFVASALVDMYATHE-------------------------------QVGKAR 327

Query: 144 EVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCD 200
           +VFD +PD  + L ++NAMI G  + G ++  + LF  M  +        + ASVL  C 
Sbjct: 328 QVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 387

Query: 201 AGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
                 G++ +H  V K G +    V NAL+ MY   G    A ++F  A   + D +S+
Sbjct: 388 RSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF--AMVDLPDVVSW 445

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           N ++ G    G V +A    R+M       + P+ +T ++++  C     P  G ++H  
Sbjct: 446 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 505

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A++   +   +V +A + MY+ CG +  +  +F RL  ++ ++WN +I  Y    LG  A
Sbjct: 506 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEA 565

Query: 374 ILAYLEMQSVG-IRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALI 428
            + +  M + G  RP+E TF + LA+   SG ++  +++ HA    +G+     +   ++
Sbjct: 566 TVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625

Query: 429 SAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLN 465
               +  R+ +AY +  +M    + +  W+T++    L+
Sbjct: 626 DILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 664


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 226/711 (31%), Positives = 365/711 (51%), Gaps = 43/711 (6%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DAL  + ++ +S   K D Y+ S+TL ACA  R+   G  LH + LR+   +   V N++
Sbjct: 86  DALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSL 145

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L++Y             +E+          +L       + D    VFD M  R++  +N
Sbjct: 146 LNMYSTC---------LTEV---------PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWN 187

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKS 217
            MI+   +         +FR M ++ +R    SF +V  +V      +    L+ LV K 
Sbjct: 188 TMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKL 247

Query: 218 GFSCL--VSVVNALITMYFNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASVGRV 272
           G   +    VV++ I MY   G V  A ++F+   E    V     +N M+ G       
Sbjct: 248 GSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV-----WNTMIGGYVQNNCP 302

Query: 273 EEALIRFRDMLVAS-LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
            EA+  F  ++ +      ++TF+S ++A    +   +G Q+HA  +KS       + NA
Sbjct: 303 IEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNA 362

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MYS CG I  +  +F+ + E+D+V+WNTM+S + Q  L    ++   EMQ  G   D
Sbjct: 363 IIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVD 422

Query: 389 EFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  +LL+ +  +   E+ +  HA++  +GI     +   LI  YAK+  I  A Q+F 
Sbjct: 423 SVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFE 481

Query: 446 NMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
             S   R+  TWN +I G+  NG   +G   F +++   +RP+  TL+  L +C  + ++
Sbjct: 482 KNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTI 541

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GKQIHG+ ++  L   + +G A++ +Y+K G +  +  VF   +EK+++++  +I +Y
Sbjct: 542 GLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSY 601

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            QHG G+ A+S F AM   G IKPD  TF A+LSACS+AGLVD+G RIF SM  +Y   P
Sbjct: 602 GQHGMGERALSLFHAMLGSG-IKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQP 660

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN-WWALFSACAAHGNLRLGRIIAGL 682
           + +H  C+ D+LGR G + EA   +     +  +   W +L  AC  HG   LG+++A  
Sbjct: 661 SSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANK 720

Query: 683 LLEREQDK--PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E+       +VLLSNIYAA G W+    +R+ +++ G++K+ GCSW+
Sbjct: 721 LLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWV 771



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 140/294 (47%), Gaps = 19/294 (6%)

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSL 395
           G   +A  +F  +     V WNT+I  +   N+   A+L Y  M+ S   + D +TF S 
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA----KNERIKQAY------- 441
           L   A +  +++ + +H  V  +   ++  V N+L++ Y+    +   +  AY       
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 442 --QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
             ++F  M  RN++ WNT+I+ ++     ++  + F  ++   +RP   +      +  R
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230

Query: 500 ISSLRHGKQIHGYVLK--NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           ++   +   ++G V+K  ++ +    + ++ I +YA+ G +D +  +F+  +E++T  WN
Sbjct: 231 MNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +I  Y Q+    EA+  F  + +  +   D  TF + L+A S    +D G ++
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQL 344



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 15/193 (7%)

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSC 497
           QA  +F ++     + WNT+I GF+ N  P+  L  ++ +  S   + D YT S  L +C
Sbjct: 55  QALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKAC 114

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-------------GDLDCSLRV 544
           A+  SL+ GK +H +VL+++  S   + N+++ +Y+ C              + D   RV
Sbjct: 115 AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M +++ ++WN +IS Y +     EA   F+ M  +G I+P   +F  V  A      
Sbjct: 175 FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVWRMND 233

Query: 605 VDDGTRIFDSMVN 617
            D+   ++  +V 
Sbjct: 234 YDNANVLYGLVVK 246


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 227/711 (31%), Positives = 365/711 (51%), Gaps = 43/711 (6%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DAL  + ++ +S   K D Y+ S+TL ACA  R+   G  LH + LR+   +   V N++
Sbjct: 86  DALLFYARMRASPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSL 145

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L++Y             +E+          +L       + D    VFD M  R++  +N
Sbjct: 146 LNMYSTC---------LTEV---------PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWN 187

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKS 217
            MI+   +         +FR M ++ +R    SF +V  +V      +    L+ LV K 
Sbjct: 188 TMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKL 247

Query: 218 G--FSCLVSVVNALITMYFNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASVGRV 272
           G  F     VV++ I MY   G V  A ++F+   E    V     +N M+ G       
Sbjct: 248 GSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEV-----WNTMIGGYVQNNCP 302

Query: 273 EEALIRFRDMLVAS-LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            EA+  F  ++ +      ++TF+S ++A        +G Q+HA  +KS       + NA
Sbjct: 303 IEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNA 362

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MYS CG I  +  +F+ + E+D+V+WNTM+S + Q  L    ++    MQ  G   D
Sbjct: 363 IIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVD 422

Query: 389 EFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  +LL+ +  +   E+ +  HA++  +GI     + + LI  YAK+  I  A Q+F 
Sbjct: 423 SVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFE 481

Query: 446 NMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
             S   R+  TWN +I G+  NG   +G   F +++   +RP+  TL+  L +C  + ++
Sbjct: 482 KNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTI 541

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GKQIHG+ ++  L   + +G A++ +Y+K G +  +  VF   +EK+++++  +IS+Y
Sbjct: 542 GLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSY 601

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            QHG G+ A+S F AM   G IKPD  TF A+LSACS+AGLVD+G RIF SM  +Y   P
Sbjct: 602 GQHGMGERALSLFHAMLGSG-IKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQP 660

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN-WWALFSACAAHGNLRLGRIIAGL 682
           + +H  C+ D+LGR G + EA   +     +  +   W +L  AC  HG   LG+++A  
Sbjct: 661 SAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANK 720

Query: 683 LLEREQDK--PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E+       +VLLSNIYAA G W+    +R+ +++ G++K+ GCSW+
Sbjct: 721 LLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWV 771



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 140/294 (47%), Gaps = 19/294 (6%)

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSL 395
           G   +A  +F  +     V WNT+I  +   N+   A+L Y  M+ S   + D +TF S 
Sbjct: 51  GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA----KNERIKQAY------- 441
           L   A +  +++ + +H  V  +   ++  V N+L++ Y+    +   +  AY       
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170

Query: 442 --QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
             ++F  M  RN++ WNT+I+ ++     ++  + F  ++   +RP   +      +  R
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230

Query: 500 ISSLRHGKQIHGYVLK--NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +S   +   ++G V+K  ++ +    + ++ I +YA+ G +D +  +F+  +E++T  WN
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +I  Y Q+    EA+  F  + +  +   D  TF + L+A S    ++ G ++
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQL 344



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 15/193 (7%)

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSC 497
           QA  +F ++     + WNT+I GF+ N  P+  L  ++ +  S   + D YT S  L +C
Sbjct: 55  QALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKAC 114

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-------------GDLDCSLRV 544
           A+  SL+ GK +H +VL+++  S   + N+++ +Y+ C              + D   RV
Sbjct: 115 AQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRV 174

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M +++ ++WN +IS Y +     EA   F+ M  +G I+P   +F  V  A      
Sbjct: 175 FDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMG-IRPTPVSFVNVFPAVWRMSD 233

Query: 605 VDDGTRIFDSMVN 617
            D+   ++  +V 
Sbjct: 234 YDNANVLYGLVVK 246


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 220/713 (30%), Positives = 357/713 (50%), Gaps = 51/713 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S +G  +DAL  F  +     +  + ++L   L    ++R   FG Q+HA A+   L   
Sbjct: 79  SNNGMPRDALLAFRAMRG-RGVPCNEFALPVVLKCAPDVR---FGAQVHALAVATRLVHD 134

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
             VAN ++++Y                                  G VD A  +FD+   
Sbjct: 135 VFVANALVAVYGG-------------------------------FGMVDEARRMFDEYVG 163

Query: 150 --PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
              +R+   +N MI+   +N      IG+FREM     R + + F+ V++ C     LE 
Sbjct: 164 VGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEA 223

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GRQ+H  V ++G+   V   NAL+ MY   G++  A  VFE  K    D +S+N  + G 
Sbjct: 224 GRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFE--KMPAADVVSWNAFISGC 281

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
            + G    AL     M  + L P+  T  SV+ AC       +G Q+H   +K+  +   
Sbjct: 282 VTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDE 341

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+   + MY+  G +D+A  +F  +  +D++ WN +IS  +        +  +  M+  
Sbjct: 342 FVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKE 401

Query: 384 GIRPD--EFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           G+  D    T  S+L S+   E +     +HA     G++++  V N LI +Y K  ++ 
Sbjct: 402 GLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLD 461

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F      +II+  T++            ++ F ++L   L PD + LS  L++C 
Sbjct: 462 YAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACT 521

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +S+   GKQ+H +++K    S +  GNA++  YAKCG ++ +   F+ + E+  +SW+A
Sbjct: 522 SLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSA 581

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I   AQHG GK A+  F  M D G + P+  T T+VLSAC+HAGLVDD  + F+SM   
Sbjct: 582 MIGGLAQHGHGKRALDLFHRMLDEG-VAPNHITLTSVLSACNHAGLVDDAKKYFESMKET 640

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G    E+H +CM+D+LGRAG L++A  ++N+   QA +  W AL  A   H +  LGR+
Sbjct: 641 FGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRM 700

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  L   E +K   +VLL+N YA+AG+W+E A +R+L+K + V K+P  SW+
Sbjct: 701 AAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWV 753



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 179/676 (26%), Positives = 316/676 (46%), Gaps = 55/676 (8%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           ++ + LA     R+   G  LH++ L++GL A    +N +L+LY   R   + + VF EI
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSGLLA--GFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            +P                     C V           +++++T  + NG     +  FR
Sbjct: 64  PDP---------------------CHV----------SWSSLVTAYSNNGMPRDALLAFR 92

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
            M    V  + ++   VL    A  + FG Q+H+L   +     V V NAL+ +Y   G 
Sbjct: 93  AMRGRGVPCNEFALPVVLKC--APDVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGM 150

Query: 239 VVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           V +A ++F+E  G   +   +S+N M+       +  +A+  FR+M+ +  RP+E  F  
Sbjct: 151 VDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSC 210

Query: 297 VMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V++AC   R    G QVH   +++G+E     +NA + MYS  G I+ A  +F ++   D
Sbjct: 211 VVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAAD 270

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
           +VSWN  IS          A+   L+M+S G+ P+ FT  S+L   A +G   +   IH 
Sbjct: 271 VVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG 330

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           F+       +  V+  L+  YAK+  +  A ++F  M  R++I WN LI+G   +G   +
Sbjct: 331 FMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGE 390

Query: 471 GLQHFSELLMSELRPD--EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            L  F  +    L  D    TL+  L S A   ++ H +Q+H    K  L+S   + N +
Sbjct: 391 VLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGL 450

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           I  Y KCG LD +++VF      D IS   +++A +Q   G++A+  F  M   G ++PD
Sbjct: 451 IDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKG-LEPD 509

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
               +++L+AC+     + G ++   ++    F       + ++    + G +++A+   
Sbjct: 510 SFVLSSLLNACTSLSAYEQGKQVHAHLIKRQ-FTSDVFAGNALVYAYAKCGSIEDADMAF 568

Query: 649 NSQHIQARS-DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---A 704
           +   +  R   +W A+    A HG+ +    +   +L+ E   P+ ++ L+++ +A   A
Sbjct: 569 SG--LPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLD-EGVAPN-HITLTSVLSACNHA 624

Query: 705 GLWEEAANIRELLKRT 720
           GL ++A    E +K T
Sbjct: 625 GLVDDAKKYFESMKET 640



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 41/208 (19%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  LS+  H +DA+ LFVQ+     L+PD + LS+ L AC +L     G Q+HA+     
Sbjct: 482 MTALSQCDHGEDAIKLFVQMLRK-GLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL---- 536

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                                  +KR F+     DV++    + A  K G ++ A   F 
Sbjct: 537 -----------------------IKRQFTS----DVFAGNALVYAYAKCGSIEDADMAFS 569

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEF 206
            +P+R +  ++AMI G  ++G+    + LF  M    V  ++ +  SVLS C+ AGL++ 
Sbjct: 570 GLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDD 629

Query: 207 GRQLHSLV--------TKSGFSCLVSVV 226
            ++    +        T+  ++C++ ++
Sbjct: 630 AKKYFESMKETFGIDRTEEHYACMIDIL 657


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 229/730 (31%), Positives = 368/730 (50%), Gaps = 58/730 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L + N  LA+LSR+G + DAL +  ++  +S  + PD ++L   L +C        G Q+
Sbjct: 30  LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQV 85

Query: 80  HAYALRAGL-KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           HA A + GL    P V N+++S+Y                                + G 
Sbjct: 86  HAVAAKLGLADGDPFVGNSLVSMY-------------------------------GRCGR 114

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLD--VRRDNYSFASV 195
           VD A +VF+ M  R+L  +NA++    +      G+ LFR+ +  L      D  +  +V
Sbjct: 115 VDDAEKVFEGMAGRNLVSWNALMAAVAD---PRRGLELFRDCLEDLGGTAAPDEATLVTV 171

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA-CKVFEEAKGYV 253
           L +C A    E GR +H L  KSG+     V N L+ MY  CG + DA C   E   G  
Sbjct: 172 LPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAG 231

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSACL-CPRVG--Y 308
            + +S+NVM+ G A  G    A    R+M +    +   E+T +SV+  C   P +    
Sbjct: 232 RNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLR 291

Query: 309 QVHAQAMKSGFEAYTS-VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           ++HA  ++ G       V NA I  Y  CG +  AC +F  +  K + SWN +I  +AQ 
Sbjct: 292 ELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQN 351

Query: 368 NLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQV 423
               +AI  + EM  + G +PD F+ GSLL + G ++ +   +  H F+  NG+  +  +
Sbjct: 352 GEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFI 411

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +L+S Y +  R   A  +F  +  ++ ++WNT+I G+  NG P + LQ F E+   + 
Sbjct: 412 RVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKG 471

Query: 484 R--PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
              P     + AL +C+ + ++R GK++H + LK +L     L +++I +Y+KCG +D +
Sbjct: 472 GHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDA 531

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              F+ +  KD +SW  +I+ YA +G GKEAV  +  M   G ++PD  T+  +L AC H
Sbjct: 532 RVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREG-MEPDGFTYLGLLMACGH 590

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AG+++DG   F  M N        +H +C++ +L RAG   +A  ++     +  +    
Sbjct: 591 AGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAKILS 650

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           ++ SAC  HG + LG+ +A  LLE E  K   YVL SN+YA +  W+E   +R++L+  G
Sbjct: 651 SVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAG 710

Query: 722 VIKQPGCSWI 731
           V K+PGCSWI
Sbjct: 711 VAKEPGCSWI 720


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 217/712 (30%), Positives = 363/712 (50%), Gaps = 48/712 (6%)

Query: 34  SGHYQDALHLFV----QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SGH Q  L   V    +   S  L P   + ++ L+A AN++    G Q+HA A+  GL 
Sbjct: 308 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 367

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           A   V +++++LY         K VF                        D +CE     
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVF------------------------DLSCE----- 398

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
             +++ ++NAM+TG  +N   +  I +F+ M +  ++ D ++F S+L  C        G+
Sbjct: 399 --KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 456

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H +  K+     + V NA + MY   G + DA  +F        D IS+N +  GLA 
Sbjct: 457 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQ 514

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
               EEA+   + M +  + P +++F + ++AC   R    G Q+H  A+K G  +  +V
Sbjct: 515 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 574

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            ++ I +YS  G ++ +  IFA++    IV  N +I+ + Q N    AI  + ++   G+
Sbjct: 575 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 634

Query: 386 RPDEFTFGSLLAS-SGFIE--MVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAY 441
           +P   TF S+L+  SG +   + + +H +   +G++  +  +  +L   Y K++ ++ A 
Sbjct: 635 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 694

Query: 442 QIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++   M   +N+  W  +I+G+  NG+    L  F  +    +R DE T +  L +C+ +
Sbjct: 695 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 754

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNAL 559
           ++   GK+IHG + K+   S  +  +A+I +Y+KCGD+  S   F  +  K D + WN++
Sbjct: 755 TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 814

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  +A++G   EA+  F+ M+++ +IKPD+ TF  VL AC+H+GL+ +G   F SM   Y
Sbjct: 815 IVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 873

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P  DH +C +DLLGR G+L EA+  I+    +     W    +AC  H +   G+I 
Sbjct: 874 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 933

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L+E E    S YVLLS+++AA G W EA   RE ++  GV K PGCSWI
Sbjct: 934 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 985



 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 187/655 (28%), Positives = 309/655 (47%), Gaps = 54/655 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RSG   D L  F  I  +   +PD + L+  L+AC+ +   A+G Q+H   +++G  + 
Sbjct: 143 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 202

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT------------------------ 127
                 ++ +Y    D+ + +RVF  I  PD   W+                        
Sbjct: 203 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 262

Query: 128 -----------TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                      T +S     G +D+A  +  KMP      +NA+I+G  ++G E   +GL
Sbjct: 263 MGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 322

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +++M    +     +FAS+LS   A +  F  G+Q+H+     G    V V ++LI +Y 
Sbjct: 323 YKDMRSWGLWPTRSTFASMLSAA-ANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYA 381

Query: 235 NCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            CG   DA  VF+ +    C+   + +N M+ G       EEA+  F+ M+  +L+  E 
Sbjct: 382 KCGCPSDAKNVFDLS----CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 437

Query: 293 TFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TFVS++ AC       +G QVH   +K+  +    V+NA + MYS  G I +A  +F+ +
Sbjct: 438 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 497

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
             KD +SWN +    AQ      A+     M+  GI PD+ +F + + +   I   E   
Sbjct: 498 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 557

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH      GI +N  V ++LI  Y+K+  ++ + +IF  +   +I+  N LI GF+ N 
Sbjct: 558 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 617

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLG 525
              + +Q F ++L   L+P   T S  LS C+   +   GKQ+H Y LK+  L     LG
Sbjct: 618 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 677

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            ++  +Y K   L+ + ++   M + K+   W A+IS YAQ+G G  ++  F  M+    
Sbjct: 678 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC-N 736

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           ++ D+ATF +VL ACS      DG  I   ++   GF   E   S ++D+  + G
Sbjct: 737 VRSDEATFASVLKACSDVTAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCG 790



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 256/521 (49%), Gaps = 45/521 (8%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFA 193
           K G V YA        +R     +++++    +G     +G FR +      R D +  A
Sbjct: 113 KSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLA 172

Query: 194 SVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            VLS C   G+L +GRQ+H  V KSGFS  V    AL+ MY  CG+V +A +VF+   G 
Sbjct: 173 VVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD---GI 229

Query: 253 VC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
            C D I ++ M+     VG  +EAL  F  M      P ++T V++              
Sbjct: 230 ACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI-------------- 275

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                             I+  +S G++D A  +  ++     V+WN +IS +AQ  L  
Sbjct: 276 ------------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEF 317

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASS----GFIEMVEMIHAFVFINGIITNIQVSNAL 427
           + +  Y +M+S G+ P   TF S+L+++     F+E  +M HA   ++G+  N+ V ++L
Sbjct: 318 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM-HAAAVMHGLDANVFVGSSL 376

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+ YAK      A  +F     +NI+ WN ++ GF+ N  P + ++ F  ++   L+ DE
Sbjct: 377 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 436

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C  +SS   GKQ+H   +KN +   + + NA + +Y+K G +  +  +F++
Sbjct: 437 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 496

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD+ISWNAL    AQ+ E +EAV   K M+  G I PD  +F+  ++ACS+    + 
Sbjct: 497 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATET 555

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           G +I   +   YG        S ++DL  + G ++ + ++ 
Sbjct: 556 GKQIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 595



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 47/402 (11%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS--YNVMMDG 265
           R LH  + + G   L  + ++L+ +Y   G V  A      A GY  +  S   + ++  
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAW----SALGYAGERASGAASSLLSC 141

Query: 266 LASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGF 319
            A  G   + L  FR +   A  RP +     V+SAC   RVG      QVH   +KSGF
Sbjct: 142 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSAC--SRVGVLAYGRQVHCDVVKSGF 199

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +      A + MY+ CG +  A  +F  +   D + W++MI+ Y +    + A+  +  
Sbjct: 200 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 259

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           M  +G  PD+ T                         ++T       +IS  A + R+  
Sbjct: 260 MDKMGSAPDQVT-------------------------LVT-------IISTLASSGRLDH 287

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +   M   + + WN +I+G   +G     L  + ++    L P   T +  LS+ A 
Sbjct: 288 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 347

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +   G+Q+H   + + L + + +G+++I LYAKCG    +  VF++  EK+ + WNA+
Sbjct: 348 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 407

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ++ + Q+   +EA+  F+ M     ++ D+ TF ++L AC++
Sbjct: 408 LTGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTY 448



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 2/209 (0%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +   G     ++ ++L+  Y K+ R+  A+        R     ++L++    +G 
Sbjct: 88  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147

Query: 468 PVQGLQHFSEL-LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           P   L  F  +   +  RPD++ L+V LS+C+R+  L +G+Q+H  V+K+   S +    
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCGD+  + RVF+ +   DTI W+++I+ Y + G  +EA++ F  M  +G   
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS-A 266

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           PDQ T   ++S  + +G +D  T +   M
Sbjct: 267 PDQVTLVTIISTLASSGRLDHATALLKKM 295


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 217/712 (30%), Positives = 363/712 (50%), Gaps = 48/712 (6%)

Query: 34  SGHYQDALHLFV----QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SGH Q  L   V    +   S  L P   + ++ L+A AN++    G Q+HA A+  GL 
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           A   V +++++LY         K VF                        D +CE     
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVF------------------------DLSCE----- 388

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
             +++ ++NAM+TG  +N   +  I +F+ M +  ++ D ++F S+L  C        G+
Sbjct: 389 --KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 446

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H +  K+     + V NA + MY   G + DA  +F        D IS+N +  GLA 
Sbjct: 447 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQ 504

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
               EEA+   + M +  + P +++F + ++AC   R    G Q+H  A+K G  +  +V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            ++ I +YS  G ++ +  IFA++    IV  N +I+ + Q N    AI  + ++   G+
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624

Query: 386 RPDEFTFGSLLAS-SGFIE--MVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAY 441
           +P   TF S+L+  SG +   + + +H +   +G++  +  +  +L   Y K++ ++ A 
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 684

Query: 442 QIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++   M   +N+  W  +I+G+  NG+    L  F  +    +R DE T +  L +C+ +
Sbjct: 685 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 744

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNAL 559
           ++   GK+IHG + K+   S  +  +A+I +Y+KCGD+  S   F  +  K D + WN++
Sbjct: 745 TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 804

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  +A++G   EA+  F+ M+++ +IKPD+ TF  VL AC+H+GL+ +G   F SM   Y
Sbjct: 805 IVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVY 863

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P  DH +C +DLLGR G+L EA+  I+    +     W    +AC  H +   G+I 
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 923

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L+E E    S YVLLS+++AA G W EA   RE ++  GV K PGCSWI
Sbjct: 924 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 187/655 (28%), Positives = 309/655 (47%), Gaps = 54/655 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RSG   D L  F  I  +   +PD + L+  L+AC+ +   A+G Q+H   +++G  + 
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT------------------------ 127
                 ++ +Y    D+ + +RVF  I  PD   W+                        
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 128 -----------TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                      T +S     G +D+A  +  KMP      +NA+I+G  ++G E   +GL
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 312

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +++M    +     +FAS+LS   A +  F  G+Q+H+     G    V V ++LI +Y 
Sbjct: 313 YKDMRSWGLWPTRSTFASMLSAA-ANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYA 371

Query: 235 NCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            CG   DA  VF+ +    C+   + +N M+ G       EEA+  F+ M+  +L+  E 
Sbjct: 372 KCGCPSDAKNVFDLS----CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 293 TFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TFVS++ AC       +G QVH   +K+  +    V+NA + MYS  G I +A  +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
             KD +SWN +    AQ      A+     M+  GI PD+ +F + + +   I   E   
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH      GI +N  V ++LI  Y+K+  ++ + +IF  +   +I+  N LI GF+ N 
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLG 525
              + +Q F ++L   L+P   T S  LS C+   +   GKQ+H Y LK+  L     LG
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            ++  +Y K   L+ + ++   M + K+   W A+IS YAQ+G G  ++  F  M+    
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC-N 726

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           ++ D+ATF +VL ACS      DG  I   ++   GF   E   S ++D+  + G
Sbjct: 727 VRSDEATFASVLKACSDVTAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCG 780



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 256/521 (49%), Gaps = 45/521 (8%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFA 193
           K G V YA        +R     +++++    +G     +G FR +      R D +  A
Sbjct: 103 KSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLA 162

Query: 194 SVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            VLS C   G+L +GRQ+H  V KSGFS  V    AL+ MY  CG+V +A +VF+   G 
Sbjct: 163 VVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD---GI 219

Query: 253 VC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
            C D I ++ M+     VG  +EAL  F  M      P ++T V++              
Sbjct: 220 ACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI-------------- 265

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                             I+  +S G++D A  +  ++     V+WN +IS +AQ  L  
Sbjct: 266 ------------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEF 307

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASS----GFIEMVEMIHAFVFINGIITNIQVSNAL 427
           + +  Y +M+S G+ P   TF S+L+++     F+E  +M HA   ++G+  N+ V ++L
Sbjct: 308 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM-HAAAVMHGLDANVFVGSSL 366

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+ YAK      A  +F     +NI+ WN ++ GF+ N  P + ++ F  ++   L+ DE
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 426

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C  +SS   GKQ+H   +KN +   + + NA + +Y+K G +  +  +F++
Sbjct: 427 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 486

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD+ISWNAL    AQ+ E +EAV   K M+  G I PD  +F+  ++ACS+    + 
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATET 545

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           G +I   +   YG        S ++DL  + G ++ + ++ 
Sbjct: 546 GKQIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 47/402 (11%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS--YNVMMDG 265
           R LH  + + G   L  + ++L+ +Y   G V  A      A GY  +  S   + ++  
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAW----SALGYAGERASGAASSLLSC 131

Query: 266 LASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGF 319
            A  G   + L  FR +   A  RP +     V+SAC   RVG      QVH   +KSGF
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSAC--SRVGVLAYGRQVHCDVVKSGF 189

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +      A + MY+ CG +  A  +F  +   D + W++MI+ Y +    + A+  +  
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           M  +G  PD+ T                         ++T       +IS  A + R+  
Sbjct: 250 MDKMGSAPDQVT-------------------------LVT-------IISTLASSGRLDH 277

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +   M   + + WN +I+G   +G     L  + ++    L P   T +  LS+ A 
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +   G+Q+H   + + L + + +G+++I LYAKCG    +  VF++  EK+ + WNA+
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ++ + Q+   +EA+  F+ M     ++ D+ TF ++L AC++
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTY 438



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 2/209 (0%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +   G     ++ ++L+  Y K+ R+  A+        R     ++L++    +G 
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 468 PVQGLQHFSEL-LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           P   L  F  +   +  RPD++ L+V LS+C+R+  L +G+Q+H  V+K+   S +    
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCGD+  + RVF+ +   DTI W+++I+ Y + G  +EA++ F  M  +G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS-A 256

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           PDQ T   ++S  + +G +D  T +   M
Sbjct: 257 PDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  344 bits (883), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 308/549 (56%), Gaps = 12/549 (2%)

Query: 192 FASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
            A +L  C   GL + G Q+H+     GF   + + N LI MY  C  V  AC VF+  +
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD--R 64

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---G 307
               + +S+  +M G    G  + +L    +M  + ++P+E TF + + AC    V   G
Sbjct: 65  MLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENG 124

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+H   +KSGFE  + V NA I MYS CG+I  A  +F ++  +++VSWN MI+ +   
Sbjct: 125 MQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQ-- 422
             GR +++ +  MQ  G  PDEFTF S L + G +  +     IHA +   G   +I+  
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +++A++  YAK   + +A ++F  +  +N+I+W+ LI GF   G  ++ +  F +L  S 
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
              D + LS+ +   A ++ +  GKQ+H Y+LK      +S+ N++I +Y KCG  + + 
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAE 364

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           R+F+ M  ++ +SW  +I+ Y +HG G++A+  F  MQ  G I+ D+  + A+LSACSH+
Sbjct: 365 RLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDG-IELDEVAYLALLSACSHS 423

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GL+ +    F  + N++   P  +H +CM+D+LGRAG L EA+ +I +  ++     W  
Sbjct: 424 GLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQT 483

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L SAC  HGNL +GR +  +L   + D P  YV++SNIYA AG W+E   +R+L+K  G+
Sbjct: 484 LLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGL 543

Query: 723 IKQPGCSWI 731
            K+ G SW+
Sbjct: 544 KKEAGQSWV 552



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/539 (24%), Positives = 249/539 (46%), Gaps = 50/539 (9%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K   VD AC VFD+M +R++  + A++ G  + G     + L  EM    V+ + ++F++
Sbjct: 51  KCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFST 110

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C A G++E G Q+H +  KSGF  +  V NA I MY  CG +  A +VF   K   
Sbjct: 111 SLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFN--KMPF 168

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
            + +S+N M+ G    G   ++L+ F+ M      P E TF S + AC      R G Q+
Sbjct: 169 RNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQI 228

Query: 311 HAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           HA  +  GF       +++A + +Y+ CG + EA  +F R+++K+++SW+ +I  +AQ  
Sbjct: 229 HASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEG 288

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
               A+  + +++      D F    ++   A    +E  + +H ++       +I V+N
Sbjct: 289 NLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVAN 348

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ++I  Y K    ++A ++F  M  RN+++W  +I G+  +G   + +  F+ + +  +  
Sbjct: 349 SIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIEL 408

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           DE      LS+C+    +R  ++    +  N+                            
Sbjct: 409 DEVAYLALLSACSHSGLIRESQEYFSRLCNNH---------------------------- 440

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
              ++ +   +  ++    + G+ KEA +  + M    ++KP++  +  +LSAC   G +
Sbjct: 441 --QMKPNIEHYACMVDILGRAGQLKEAKNLIENM----KLKPNEGIWQTLLSACRVHGNL 494

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWW 661
           + G  + + +       P   +   M ++   AGY  E ERV   + ++ ++  +   W
Sbjct: 495 EIGREVGEILFRMDTDNPV--NYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSW 551



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 208/446 (46%), Gaps = 47/446 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G+ + +L L  ++  S  +KP+ ++ ST+L AC  L     G Q+H   +++G +   
Sbjct: 82  QEGNAKGSLALLCEMGYS-GVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVS 140

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N  + +Y                               +K G +  A +VF+KMP R
Sbjct: 141 VVGNATIDMY-------------------------------SKCGRIGMAEQVFNKMPFR 169

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
           +L  +NAMI G T  G     + LF+ M       D ++F S L  C A G +  G Q+H
Sbjct: 170 NLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIH 229

Query: 212 SLVTKSGFSCLVS--VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           + +   GF   +   + +A++ +Y  CG + +A KVF+  +    + IS++ ++ G A  
Sbjct: 230 ASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK--NLISWSALIQGFAQE 287

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSV 325
           G + EA+  FR  L  S+   +   +S+M            G Q+H   +K       SV
Sbjct: 288 GNLLEAMDLFRQ-LRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISV 346

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +N+ I MY  CG  +EA  +F+ +Q +++VSW  MI+ Y +  LG  AI  +  MQ  GI
Sbjct: 347 ANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGI 406

Query: 386 RPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             DE  + +LL++   SG I E  E        + +  NI+    ++    +  ++K+A 
Sbjct: 407 ELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAK 466

Query: 442 QIFHNMSPR-NIITWNTLINGFLLNG 466
            +  NM  + N   W TL++   ++G
Sbjct: 467 NLIENMKLKPNEGIWQTLLSACRVHG 492



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 5/145 (3%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   ++ G+  +A+ LF Q+  S     D + LS  +   A+L     G Q+H Y L+  
Sbjct: 281 IQGFAQEGNLLEAMDLFRQLRESVS-NVDGFVLSIMMGVFADLALVEQGKQMHCYILKVP 339

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VAN+I+ +Y         +R+FSE+Q  +V SWT  ++   K G  + A  +F+
Sbjct: 340 SGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFN 399

Query: 148 KMP----DRDLPVYNAMITGCTENG 168
           +M     + D   Y A+++ C+ +G
Sbjct: 400 RMQLDGIELDEVAYLALLSACSHSG 424


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 234/723 (32%), Positives = 367/723 (50%), Gaps = 47/723 (6%)

Query: 30  NLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           +L+ +G++  AL     I  +S + + D  +L   + + A LR+A     +HA ALR GL
Sbjct: 29  SLTAAGNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGL 88

Query: 89  --KAYPHVANTILSLYKNARDLVSVKRVFSEIQNP--DVYSWTTFLSACTKMGHVDYACE 144
             +  P VAN +L+ Y     L +   VF  I +   D  S+ + +SA       D+A  
Sbjct: 89  LHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALA 148

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
               M     P+ +  +            + + R +  L                 A  +
Sbjct: 149 ALRAMLAGGHPLTSFTL------------VSVLRAVSHLPA--------------AAAAV 182

Query: 205 EFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             GR+ H+   K+G          NAL++MY   G V DA ++F  A     D +++N M
Sbjct: 183 RLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTM 242

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG- 318
           +  L   G  +EA+    DM+   +RP  +TF S + AC       VG ++HA  +K   
Sbjct: 243 VSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDE 302

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILA 376
             A + V++A + MY++  ++ +A  +F  + +  K +  WN MI  YAQ  +   A+  
Sbjct: 303 LAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRL 362

Query: 377 YLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYA 432
           +  M++  G  P E T  S+L +    E     E +H +V   G+  N  V NAL+  YA
Sbjct: 363 FARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYA 422

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYT 489
           +  +   A +IF  +   ++++WNTLI G ++ G      Q   E+   E   + P+  T
Sbjct: 423 RLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAIT 482

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   L  CA +++   GK+IHGY +++ L + +++G+A++ +YAKCG L  S  VF+ + 
Sbjct: 483 LMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLP 542

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++TI+WN LI AY  HG G EA   F  M   G  +P++ TF A L+ACSH+G+VD G 
Sbjct: 543 RRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGL 602

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACA 668
           ++F +M  D+G  P  D L+C++D+LGRAG LDEA  ++ S    + +   W  +  AC 
Sbjct: 603 QLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACR 662

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H N+ LG I    LLE E ++ S YVLL NIY+AAG W  AA +R  ++R GV K+PGC
Sbjct: 663 LHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGC 722

Query: 729 SWI 731
           SWI
Sbjct: 723 SWI 725



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 208/459 (45%), Gaps = 52/459 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L +SG + +A+     +  +  ++PD  + ++ L AC+ L     G ++HAY +
Sbjct: 240 NTMVSVLVQSGMFDEAVQTLYDM-VALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 85  RAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   L A   VA+ ++ +Y                                    V  A 
Sbjct: 299 KDDELAANSFVASALVDMYATHE-------------------------------QVGKAR 327

Query: 144 EVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCD 200
           +VFD +PD  + L ++NAMI G  + G ++  + LF  M  +        + ASVL  C 
Sbjct: 328 QVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA 387

Query: 201 AGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
                 G++ +H  V K G +    V NAL+ MY   G    A ++F  A   + D +S+
Sbjct: 388 RSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF--AMVDLPDVVSW 445

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           N ++ G    G V +A    R+M       + P+ +T ++++  C     P  G ++H  
Sbjct: 446 NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGY 505

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A++   +   +V +A + MY+ CG +  +  +F RL  ++ ++WN +I  Y    LG  A
Sbjct: 506 AVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEA 565

Query: 374 ILAYLEMQSVG-IRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALI 428
            + +  M + G  RP+E TF + LA+   SG ++  +++ HA    +G+     +   ++
Sbjct: 566 TVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVV 625

Query: 429 SAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLN 465
               +  R+ +AY +  +M    + +  W+T++    L+
Sbjct: 626 DILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 664


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 216/672 (32%), Positives = 353/672 (52%), Gaps = 47/672 (6%)

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           R+   G  +H+Y ++AG +      N +L+LY                            
Sbjct: 81  RDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLY---------------------------- 112

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
               K   +D A +VFD+M  R+   + ++I G  E+        +  +MHK     + +
Sbjct: 113 ---VKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEH 169

Query: 191 SFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           +   +L  C   D  +L  G Q+H  V KSGF   V V  +LI MY   G    A KVF+
Sbjct: 170 TCTVILQACSSPDDRIL--GEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFD 227

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCP 304
            + G+  D    N M+      G   +A+  F+++L     P++ TF +++S C   L  
Sbjct: 228 -SMGFK-DIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGV 285

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G Q+   A K GF + TSV NA ITMY + G   EA  +F+ + EK+++SW  +IS Y
Sbjct: 286 EEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGY 345

Query: 365 AQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
           ++   G+ A+ A+L +   +GI  D     ++L   +    +E+   IH FV   G   +
Sbjct: 346 SRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACD 405

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN-GFPVQGLQHFSELL 479
           + V+ AL+  YAK E+++ A  +F ++S + I ++N ++ GFL + G     +  F++L 
Sbjct: 406 VNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLR 465

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           ++ ++PD  T S  LS  A  +SL  G+  H Y +K    + +S+ N++I++YAKCG ++
Sbjct: 466 LAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIE 525

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + ++FN+M  +D+ISWNALISAYA HG+ ++++  F+ M+  G   PD+ T  A+L AC
Sbjct: 526 DAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKG-FDPDEFTILAILQAC 584

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           +++GL  DG  +F+ M   YG  P  +H +CM DLLGRAGYL EA  +I        +  
Sbjct: 585 TYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLL 644

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W  L + C  HGNL  G++ +  LL+    +   Y+L+SN+YA+  + +EAA +R+++  
Sbjct: 645 WRTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMND 704

Query: 720 TGVIKQPGCSWI 731
               K+ G SWI
Sbjct: 705 LKFRKEAGSSWI 716



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 239/521 (45%), Gaps = 44/521 (8%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           ++ +  L AC++  +   G Q+H + +++G      V  +++++Y               
Sbjct: 169 HTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMY--------------- 213

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
                           TK G  D A +VFD M  +D+   N MI      G     I +F
Sbjct: 214 ----------------TKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVF 257

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           + +        +Y+F +++S C+  L +E G+QL  L  K GF    SV NA+ITMY N 
Sbjct: 258 KNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNS 317

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG---RVEEALIRFRDMLVASLRPSELT 293
           G   +A ++F        + IS+  ++ G +  G   +  +A +   D L  +   + LT
Sbjct: 318 GMPKEAERMFSSMSEK--NLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLT 375

Query: 294 -FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
             +   S C    +G Q+H   MK G     +V+ A + +Y+ C K+  A ++F  L  K
Sbjct: 376 AILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNK 435

Query: 353 DIVSWNTMISTYAQRNLG-RSAILAYLEMQSVGIRPDEFTFG---SLLASSGFIEMVEMI 408
            I S+N +++ + + +      ++ + +++  G++PD  TF    SLLA+   +E     
Sbjct: 436 GIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSF 495

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA+    G  TNI V+N++IS YAK   I+ A+Q+F+ M+ R+ I+WN LI+ + L+G  
Sbjct: 496 HAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQA 555

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA- 527
            + L  F E+      PDE+T+   L +C      + G  +   +     I  +    A 
Sbjct: 556 QKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYAC 615

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
           M  L  + G L  ++ +       K T+ W  L++    HG
Sbjct: 616 MADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHG 656



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 210/456 (46%), Gaps = 49/456 (10%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           LN  +    R+G+   A+ +F  + +    +P  Y+ +  ++ C        G QL   A
Sbjct: 237 LNFMILEYGRAGNGGKAIEVFKNLLND-GFEPTDYTFTNIISTCNGDLGVEEGKQLQGLA 295

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
            + G  +   V N I+++Y N+      +R+FS +   ++ SWT                
Sbjct: 296 FKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWT---------------- 339

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVC-DA 201
                          A+I+G + +GY    +  F  +H +L +  D+    ++L  C D 
Sbjct: 340 ---------------ALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDC 384

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISY 259
             LE G Q+H  V K G +C V+V  AL+ +Y  C  +  A  VF+    KG      S+
Sbjct: 385 NNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIA----SF 440

Query: 260 NVMMDG-LASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAM 315
           N ++ G L S G  E+ +I F  + +A ++P  +TF   +S+++       G   HA  +
Sbjct: 441 NAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTV 500

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+GF+   SV+N+ I+MY+ CG I++A  +F  +  +D +SWN +IS YA     + ++ 
Sbjct: 501 KTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAYALHGQAQKSLF 560

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEM-VEMIHAFVFIN---GIITNIQVSNALISAY 431
            + EM+  G  PDEFT  ++L +  +  +  + I  F  +    GI   ++    +    
Sbjct: 561 LFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLL 620

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
            +   + +A  I      P++ + W TL+N   L+G
Sbjct: 621 GRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHG 656



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 172/392 (43%), Gaps = 67/392 (17%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S+ S++ L+     ++  SRSG+ + A+  F+ +H    +  D   L+  L  C++  N 
Sbjct: 328 SSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNL 387

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+H + ++ G     +VA  ++ LY     L S + VF  + N  + S        
Sbjct: 388 ELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIAS-------- 439

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE-NGYEDIGIGLFREMHKLDVRRDNYSF 192
                                  +NA++ G  E +G E+  + LF ++    V+ D  +F
Sbjct: 440 -----------------------FNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTF 476

Query: 193 ASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           + +LS + +   LE GR  H+   K+GF   +SV N++I+MY  CG++ DA ++F     
Sbjct: 477 SRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMN- 535

Query: 252 YVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--------- 301
             C D IS+N ++   A  G+ +++L  F +M      P E T ++++ AC         
Sbjct: 536 --CRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDG 593

Query: 302 LC------PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDI 354
           +C      P+ G       +K   E Y  +++    +    G + EA  I  R    K  
Sbjct: 594 ICLFNLMEPKYG-------IKPLLEHYACMAD----LLGRAGYLSEAMDIIKRSPFPKST 642

Query: 355 VSWNTMIST---YAQRNLGRSAILAYLEMQSV 383
           + W T+++    +   N G+ A    L++  V
Sbjct: 643 LLWRTLVNVCKLHGNLNFGKLASKHLLDLSPV 674


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 220/694 (31%), Positives = 365/694 (52%), Gaps = 48/694 (6%)

Query: 53  LKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++P D  + S+ L +C   R+   G  +HA  +   ++    + N+++SLY  + DL   
Sbjct: 57  IRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKA 116

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           K VF                            E   +   RD+  ++AM+     NG E 
Sbjct: 117 KDVF----------------------------ETMGRFGKRDVVSWSAMMACFGNNGREF 148

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNAL 229
             I LF E  ++ +  ++Y + +V+  C ++  +  GR +   + K+G F   V V  +L
Sbjct: 149 DAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSL 208

Query: 230 ITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           I M+    N  + A KVF+  K    + +++ +M+     +G   EA+  F DM+++   
Sbjct: 209 IDMFVKGENSFENAYKVFD--KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEA 342
             + T  SV SAC       +G Q+H+ A++SG      V  + + MY+ C   G +D+ 
Sbjct: 267 SDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLA--DDVECSLVDMYAKCSADGSVDDC 324

Query: 343 CMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG 400
             +F R+Q+  ++SW  +I+ Y Q  NL   AI  + EM + G + P+ FTF S   + G
Sbjct: 325 RKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384

Query: 401 FI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            +    + + +    F  G+ +N  VSN++IS + K +R++ A   F ++S +N++++NT
Sbjct: 385 NVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNT 444

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
            ++G   N       +  SE+   EL    +T +  LS  A + SLR G+QIH  VLK  
Sbjct: 445 FLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLG 504

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L     + NA+I++Y+KCG +D + RVF++M  ++ ISW ++I+ +A+HG  +  +  F 
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFN 564

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G +KP++ T+ A+LSACSH GLV +G R F+SM  D+   P  +H +CM+DLL R
Sbjct: 565 QMTKEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
           AG L +A   IN+   QA    W     AC  H N  LG++ A  +LE + ++P+ Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQL 683

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNIYA+AG WEE+  +R  +K   ++K+ GCSWI
Sbjct: 684 SNIYASAGKWEESTEMRRKMKERNLVKEGGCSWI 717



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 155/560 (27%), Positives = 260/560 (46%), Gaps = 62/560 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A    +G   DA+ LFV+      L P+ Y  +  + AC+N      G  +  + ++ G
Sbjct: 138 MACFGNNGREFDAIKLFVEFLE-MGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTG 196

Query: 88  -LKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
             ++   V  +++ ++ K      +  +VF ++   +V +WT  ++ C +MG    A   
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
           F  M                 +G+E                 D ++ +SV S C +   L
Sbjct: 257 FLDM---------------VLSGFES----------------DKFTLSSVFSACAELENL 285

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNC---GNVVDACKVFEEAKGYVCDH--ISY 259
             GRQLHS   +SG +  V    +L+ MY  C   G+V D  KVF+  +    DH  +S+
Sbjct: 286 SLGRQLHSWAIRSGLADDVEC--SLVDMYAKCSADGSVDDCRKVFDRMQ----DHSVMSW 339

Query: 260 NVMMDG-LASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
             ++ G + +     EA+  F +M+    + P+  TF S   AC     PRVG QV   A
Sbjct: 340 TALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHA 399

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS-- 372
            K G  + +SVSN+ I+M+  C ++++A   F  L EK++VS+NT +     RNL     
Sbjct: 400 FKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTC-RNLDFEHA 458

Query: 373 -AILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
             +L+ +  + +G+    FTF SLL   A+ G +   E IH+ V   G+  N  V NALI
Sbjct: 459 FELLSEIAERELGV--SAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALI 516

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           S Y+K   I  A ++F  M  RN+I+W ++I GF  +GF  + L+ F+++    ++P+E 
Sbjct: 517 SMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEV 576

Query: 489 TLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T    LS+C+ +  +  G +  +     + +  KM     M+ L  + G L  +    N 
Sbjct: 577 TYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINT 636

Query: 548 M-IEKDTISWNALISAYAQH 566
           M  + D + W   + A   H
Sbjct: 637 MPFQADVLVWRTFLGACRVH 656



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 95/195 (48%), Gaps = 9/195 (4%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S++ L+  N  L    R+  ++ A  L  +I +  +L    ++ ++ L+  AN+ +   G
Sbjct: 435 SEKNLVSYNTFLDGTCRNLDFEHAFELLSEI-AERELGVSAFTFASLLSGVANVGSLRKG 493

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+H+  L+ GL     V N ++S+Y     + +  RVFS + N +V SWT+ ++   K 
Sbjct: 494 EQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKH 553

Query: 137 GHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDN 189
           G  +   E F++M    +      Y A+++ C+  G    G   F  M   HK+  + ++
Sbjct: 554 GFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEH 613

Query: 190 YSFASVLSVCDAGLL 204
           Y+   V  +C AGLL
Sbjct: 614 YA-CMVDLLCRAGLL 627


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 221/691 (31%), Positives = 350/691 (50%), Gaps = 48/691 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSV 111
           L P   S   +L    + ++   G  LHA  ++ A   +  ++AN++++ Y     L   
Sbjct: 3   LHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHV--DYACEVFDKM-PDRDLPVYNAMITGCTENG 168
           K VF  I N DV SW   ++  ++ G     +  E+F +M  D  LP           N 
Sbjct: 63  KLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILP-----------NA 111

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
           +   GI               ++ AS LS      + FG+Q H++  K      V V ++
Sbjct: 112 HTFSGI---------------FTAASNLSS-----IFFGQQAHAVAIKMACFYDVFVGSS 151

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY   G + +A +VF+       + +++  M+ G A      EA   F  M      
Sbjct: 152 LLNMYCKAGLLFEAREVFDRMPER--NEVTWATMISGYAIQRLAGEAFEVFELMRREEED 209

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            +E  F SV+SA   P     G Q+H  A+K+G   + S+ NA +TMY+ CG +D++  +
Sbjct: 210 VNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQV 269

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F    +K+ ++W+ MI+ YAQ      A+  +  M   GI P EFT   +L   + +  +
Sbjct: 270 FEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAV 329

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E  + +H ++   G  + + +  AL+  YAK+   + A + F+ +   +++ W ++I G+
Sbjct: 330 EEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGY 389

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + NG     L  +  + M  + P+E T++  L +C+ +++   G+QIH   +K  L  ++
Sbjct: 390 VQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEV 449

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM--Q 580
           ++G+A+ T+YAKCG+L+    VF  M E+D ISWNA+IS  +Q+G GKEA+  F+ M  Q
Sbjct: 450 TIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQ 509

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           D    KPD  TF  VLSACSH GLVD G   F  M +++G +P  +H +CM+D+L RAG 
Sbjct: 510 DT---KPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGK 566

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L EA+  I S  I      W  L  AC  + N  LG      L+E    + S YVLLS I
Sbjct: 567 LYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGI 626

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y A G  E+   +R ++K  GV K+PGCSWI
Sbjct: 627 YTALGRPEDVERVRSMMKVRGVSKEPGCSWI 657



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 230/473 (48%), Gaps = 41/473 (8%)

Query: 41  LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
           + LF ++ + + L P+ ++ S    A +NL +  FG Q HA A++        V +++L+
Sbjct: 96  MELFQRMRADNIL-PNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLN 154

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           +Y  A  L   + VF                               D+MP+R+   +  M
Sbjct: 155 MYCKAGLLFEAREVF-------------------------------DRMPERNEVTWATM 183

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGF 219
           I+G            +F  M + +   + ++F SVLS +     ++ G+Q+H L  K+G 
Sbjct: 184 ISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGL 243

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              +S++NAL+TMY  CG++ D+ +VFE +     + I+++ M+ G A  G   +AL  F
Sbjct: 244 LVFLSILNALVTMYAKCGSLDDSLQVFEMSNDK--NSITWSAMITGYAQSGDSHKALKLF 301

Query: 280 RDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
             M  A + PSE T V V++AC        G QVH   +K GFE+   +  A + MY+  
Sbjct: 302 SRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKS 361

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G  ++A   F  LQ+ D+V W +MI+ Y Q      A+  Y  MQ  GI P+E T  S+L
Sbjct: 362 GVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVL 421

Query: 397 ASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
            +   +   +    IHA     G+   + + +AL + YAK   +++   +F  M  R+II
Sbjct: 422 KACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDII 481

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +WN +I+G   NG+  + L+ F E+   + +PD+ T    LS+C+ +  +  G
Sbjct: 482 SWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSG 534



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 35/271 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++SG    AL LF ++H +  + P  ++L   L AC++      G Q+H Y L+ G ++ 
Sbjct: 289 AQSGDSHKALKLFSRMHFA-GINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQ 347

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            ++   ++ +Y  +      ++ F+ +Q PD+  WT+                       
Sbjct: 348 LYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTS----------------------- 384

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                   MI G  +NG  +  + L+  M    +  +  + ASVL  C +    + GRQ+
Sbjct: 385 --------MIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQI 436

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+   K G    V++ +AL TMY  CGN+ +   VF        D IS+N M+ GL+  G
Sbjct: 437 HARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPER--DIISWNAMISGLSQNG 494

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             +EAL  F +M     +P ++TFV+V+SAC
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLSAC 525



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 5/157 (3%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++G  +DAL L+ ++     L P+  ++++ L AC+NL     G Q+HA  ++ G
Sbjct: 386 IAGYVQNGENEDALSLYCRMQMEGIL-PNELTMASVLKACSNLAAFDQGRQIHARTIKYG 444

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     + + + ++Y    +L     VF  +   D+ SW   +S  ++ G+   A E+F+
Sbjct: 445 LGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFE 504

Query: 148 KMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
           +M  +D       +  +++ C+  G  D G   FR M
Sbjct: 505 EMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMM 541


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 212/708 (29%), Positives = 367/708 (51%), Gaps = 48/708 (6%)

Query: 34  SGHYQD-----ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           +GH+++      L LF+ +   ++++P++ ++++   A   L    F  ++H +A++ G 
Sbjct: 271 AGHFENHECEAGLELFLTM-LENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGF 329

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
                  N+++ +Y                               T +G +  A ++F +
Sbjct: 330 AIDVAFCNSLIQMY-------------------------------TSLGRMGDAGKIFSR 358

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFG 207
           M  +D   + AMI+G  +NG+ D  + ++  M   +V  D+ + AS L+ C   G L+ G
Sbjct: 359 METKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVG 418

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            +LH L    GF   V V NAL+ MY    ++  A +VF+       D +S++ M+ G  
Sbjct: 419 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK--DVVSWSSMIAGFC 476

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS 324
              R  +AL  FR ML   ++P+ +TF++ +SAC      R G ++HA  ++ G  +   
Sbjct: 477 FNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V NA + +Y  CG+   A   F+   EKD+VSWN M+S +    LG  A+  + +M    
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTS 595

Query: 385 I-RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           + R    +  +  A  G +++   +H      G I  + V+NAL+  YAK++ I +A ++
Sbjct: 596 LGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 655

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M+ +++++W+++I GF  N      L +F  +L   ++P+  T   ALS+CA   +L
Sbjct: 656 FKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGAL 714

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK+IH YVL+  + S+  + NA++ LY KCG    +   F++  EKD +SWN ++S +
Sbjct: 715 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 774

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             HG G  A+S F  M ++G   PD+ TF  ++ ACS AG+V  G  +F      +  +P
Sbjct: 775 VAHGLGDIALSLFNQMVEMGE-HPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVP 832

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
              H +CM+DLL R G L EA  +IN   I+  +  W AL + C  H ++ LG + A ++
Sbjct: 833 NLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVI 892

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LE E +  + +VLL ++Y  AG W + A +R+ ++  G+ +  GCSW+
Sbjct: 893 LELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWV 940



 Score =  270 bits (689), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 183/598 (30%), Positives = 302/598 (50%), Gaps = 53/598 (8%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           LS   + G + +A  VF KMP+RD+  +N M+ G  + G+ +  + L+  M    +R D 
Sbjct: 138 LSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDV 197

Query: 190 YSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           Y+F  VL  C  G+ ++  GR++H+ V + GF   V V+NAL+TMY  CG++V A KVF+
Sbjct: 198 YTFPCVLRTC-GGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFD 256

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV 306
                + D IS+N M+ G       E  L  F  ML   ++P+ +T  SV  A  +   V
Sbjct: 257 GMA--MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEV 314

Query: 307 GY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           G+  ++H  A+K GF    +  N+ I MY+S G++ +A  IF+R++ KD +SW  MIS Y
Sbjct: 315 GFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGY 374

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNI 421
            +      A+  Y  M+   + PD+ T     +  A  G +++   +H      G I  +
Sbjct: 375 EKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYV 434

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V+NAL+  YAK++ I +A ++F  M+ +++++W+++I GF  N      L +F  +L  
Sbjct: 435 VVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-G 493

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++P+  T   ALS+CA   +LR GK+IH YVL+  + S+  + NA++ LY KCG    +
Sbjct: 494 HVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYA 553

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ--DVGRIKPDQATFTAVLSAC 599
              F++  EKD +SWN ++S +  HG G  A+S F  M    +GR+    A         
Sbjct: 554 WAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACL-- 611

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ-------- 651
              G +D G ++ + +  + GFI      + +L++  ++ ++D+A  V            
Sbjct: 612 ---GRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSW 667

Query: 652 -------------------------HIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
                                    H++  S  + A  SACAA G LR G+ I   +L
Sbjct: 668 SSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVL 725



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 180/664 (27%), Positives = 319/664 (48%), Gaps = 60/664 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +   N+ +    + G  ++AL L+ ++  +  ++PD+Y+    L  C  + +   G ++H
Sbjct: 162 VFSWNVMVGGYGKVGFLEEALDLYYRMLWA-GMRPDVYTFPCVLRTCGGIPDWRMGREVH 220

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ LR G      V N ++++Y    D+V+ ++VF  +   D  SW              
Sbjct: 221 AHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISW-------------- 266

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI G  EN   + G+ LF  M + +V+ +  +  SV +V  
Sbjct: 267 -----------------NAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSV-TVAS 308

Query: 201 AGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             L E  F +++H    K GF+  V+  N+LI MY + G + DA K+F   +    D +S
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME--TKDAMS 366

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +  M+ G    G  ++AL  +  M + ++ P ++T  S ++AC C     VG ++H  A 
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
             GF  Y  V+NA + MY+    ID+A  +F  + EKD+VSW++MI+ +   +    A L
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDA-L 485

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            Y       ++P+  TF + L   A++G +   + IHA+V   GI +   V NAL+  Y 
Sbjct: 486 YYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYV 545

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL-RPDEYTLS 491
           K  +   A+  F   S +++++WN +++GF+ +G     L  F++++ + L R    +  
Sbjct: 546 KCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSAL 605

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
            A +   R+     G ++H        I  + + NA++ +YAK   +D ++ VF  M EK
Sbjct: 606 AACACLGRLDV---GIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEK 662

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SW+++I+ +  +    +A+  F+ M  +G +KP+  TF A LSAC+  G +  G  I
Sbjct: 663 DVVSWSSMIAGFCFNHRSFDALYYFRYM--LGHVKPNSVTFIAALSACAATGALRSGKEI 720

Query: 612 FDSM----VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
              +    +   G++P     + +LDL  + G    A     S H +    +W  + S  
Sbjct: 721 HAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGF 774

Query: 668 AAHG 671
            AHG
Sbjct: 775 VAHG 778



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 206/435 (47%), Gaps = 41/435 (9%)

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E  +V++   C   R    G +  A+A          + NA ++M    G+I  A  +
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAGMRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAWRV 153

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI--- 402
           FA++ E+D+ SWN M+  Y +      A+  Y  M   G+RPD +TF  +L + G I   
Sbjct: 154 FAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDW 213

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            M   +HA V   G    + V NAL++ YAK   I  A ++F  M+  + I+WN +I G 
Sbjct: 214 RMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGH 273

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             N     GL+ F  +L +E++P+  T++    +   +S +   K++HG+ +K      +
Sbjct: 274 FENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDV 333

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           +  N++I +Y   G +  + ++F+ M  KD +SW A+IS Y ++G   +A+  + A+ ++
Sbjct: 334 AFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVY-ALMEL 392

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             + PD  T  + L+AC+  G +D G ++ + +  + GFI      + +L++  ++ ++D
Sbjct: 393 HNVNPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHID 451

Query: 643 EAERVINSQ---------------------------------HIQARSDNWWALFSACAA 669
           +A  V                                     H++  S  + A  SACAA
Sbjct: 452 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAA 511

Query: 670 HGNLRLGRIIAGLLL 684
            G LR G+ I   +L
Sbjct: 512 TGALRSGKEIHAYVL 526


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 202/613 (32%), Positives = 330/613 (53%), Gaps = 22/613 (3%)

Query: 137 GHVDY--ACEVFDKMPDR-DLPVYNAMITGCTENGYEDIG-IGLFREMHKLDVR------ 186
           G VD   AC +F+K P R  + +  +  +GCT++  E +   G F       V       
Sbjct: 52  GWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFP 111

Query: 187 RDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              Y F S LS C   G +E GR+ H  V K G      V  +LI MY  CG V  A +V
Sbjct: 112 HRQYVF-SALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---L 302
           +++      D  + N ++   A  G   +A   F  +     RP+  T+ ++++ C    
Sbjct: 171 YDKMTSL--DAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             + G Q+HA  +K  + + T+V NA +T+YS CG ++EA ++F  L++++I+SW   I+
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIIT 419
            + Q    + A+  +  M+  GI P+EFTF  +LAS G ++      M H  V   G+ +
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMAS 348

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            + V  A+I  Y+    + +A + F  M    + ++WN LI G++LN    + ++ F  +
Sbjct: 349 GVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRM 408

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           +  ++  +E+T S    +C+   SL    QIH  ++K+N+ S + + +++I  Y +CG L
Sbjct: 409 VKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSL 468

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + +++VF  + + D +SWN++I AY+Q+G+  +A+   + M + G  KP   TF  VLSA
Sbjct: 469 ENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGN-KPTSXTFLTVLSA 527

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSH+GLV +G   F SMV DY   P E H SCM+D+LGRAG L+ A   I    ++  + 
Sbjct: 528 CSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTAS 587

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L +AC  + NL++   +A  +L+ E +  +VYV LSN+YA  G W +A N R L++
Sbjct: 588 IWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLME 647

Query: 719 RTGVIKQPGCSWI 731
           +  + K+PGCSWI
Sbjct: 648 QKEISKEPGCSWI 660



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 183/550 (33%), Positives = 286/550 (52%), Gaps = 41/550 (7%)

Query: 188  DNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            D Y+ A  +   D  L   GR LH+ +   G + L      L++ Y  CG + +A K+F+
Sbjct: 804  DTYAKAIDMYARDRALYR-GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862

Query: 248  EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCP 304
            +      +   + V+    A  G  EEAL  F +M    LRP++    S++ AC      
Sbjct: 863  KIPN--TNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDR 920

Query: 305  RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            R G  +H   +K+ FE+   + +A I MYS CG +++AC +F  + +KD+V  N M+S Y
Sbjct: 921  RTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGY 980

Query: 365  AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNI 421
            AQ      A+    +MQ  G++P+  ++ +L+A     G   MV  +   +  NG+    
Sbjct: 981  AQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV---- 1036

Query: 422  QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
                                         ++++W ++I+GF+ N    +G   F E+L  
Sbjct: 1037 ---------------------------EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQ 1069

Query: 482  ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
               P   T+S  L +C  +++LRHGK+IHGY +   +   + + +A++ +YAKCG +  +
Sbjct: 1070 GFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEA 1129

Query: 542  LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              +F MM E++T++WN+LI  YA HG   EA+  F  M++    K D  TFTAVL+ACSH
Sbjct: 1130 KILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE-SDTKLDHLTFTAVLNACSH 1188

Query: 602  AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            AG+V+ G  +F  M   Y   P  +H +CM+DLLGRAG L EA  +I +  ++     W 
Sbjct: 1189 AGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 1248

Query: 662  ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            AL  AC  HGN+ L  + A  L E E + P   +LLSN+YA AG W  AA +++++K+  
Sbjct: 1249 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRK 1308

Query: 722  VIKQPGCSWI 731
              K PGCSWI
Sbjct: 1309 FGKFPGCSWI 1318



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 247/488 (50%), Gaps = 19/488 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +  T+ +    K G VD A  V+DKM   D    N +I+    NG+      +F ++ 
Sbjct: 147 DEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIG 206

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            +  R ++Y+++++L+VC     ++ G+QLH+ V K  +    +V NAL+T+Y  CG + 
Sbjct: 207 NMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMME 266

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +A  VFE  +    + IS+   ++G    G  ++AL +F  M  + + P+E TF  V+++
Sbjct: 267 EAEIVFESLRQR--NIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324

Query: 301 CLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVS 356
           C C +    G   H Q +K G  +   V  A I MYS  G++DEA   F ++ +    VS
Sbjct: 325 CGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVS 384

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVF 413
           WN +I+ Y        A+ A+  M    +  +EFT+ ++  A S F  +     IH+ + 
Sbjct: 385 WNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLI 444

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            + + +N+ V+++LI AY +   ++ A Q+F  +S  ++++WN++I  +  NG P + + 
Sbjct: 445 KSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIF 504

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLY 532
              +++    +P   T    LS+C+    ++ G++    ++++ ++  + +  + M+ + 
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564

Query: 533 AKCGDLDCSLRVFNMMIEKDTIS-WNALISA--YAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            + G L+ +L     +  K T S W  L++A  Y  + +  E V+     + +  ++P+ 
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVA-----EKILDLEPND 619

Query: 590 ATFTAVLS 597
           AT    LS
Sbjct: 620 ATVYVTLS 627



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/536 (24%), Positives = 238/536 (44%), Gaps = 83/536 (15%)

Query: 45   VQIHSSHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLY 102
            +  H + +   D Y+ +  + A    R+ A   G  LHA+ +  GL    + A  ++S Y
Sbjct: 793  ISTHRTFQSSSDTYAKAIDMYA----RDRALYRGRALHAHLVIIGLARLTYFAAKLMSFY 848

Query: 103  KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT 162
                 L + +++F +I N ++  W     AC + G                         
Sbjct: 849  TECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF------------------------ 884

Query: 163  GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL---EFGRQLHSLVTKSGF 219
                  YE+  +  F EM K  +R + +   S+L  C  G L     G  +H+++ K+ F
Sbjct: 885  ------YEE-ALSAFSEMQKEGLRPNQFVLPSILKAC--GHLSDRRTGENMHTVILKNSF 935

Query: 220  SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALI 277
                 +++ALI MY  CG+V  AC+VF+    ++ D   +  N M+ G A  G V EAL 
Sbjct: 936  ESDAYIISALIYMYSKCGHVEKACRVFD----WIVDKDLVVMNAMVSGYAQHGFVHEALB 991

Query: 278  RFRDMLVASLRPSELTFVSVMSACLCPRVGY-QVHAQAMKSGFEAYTSVSNAAITMYSSC 336
              + M  A ++P+ +++ ++++       G+ QV  ++M S  E +  ++   +      
Sbjct: 992  LVQKMQQAGVKPNVVSWNTLIA-------GFSQVGDKSMVS--EVFRLMTANGV------ 1036

Query: 337  GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
                          E D+VSW ++IS + Q         A+ EM   G  P   T  SLL
Sbjct: 1037 --------------EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLL 1082

Query: 397  ASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
             +   +  +   + IH +  + G+  ++ V +AL+  YAK   I +A  +F+ M  RN +
Sbjct: 1083 PACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV 1142

Query: 454  TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
            TWN+LI G+  +G+  + ++ F+++  S+ + D  T +  L++C+    +  G+ +   +
Sbjct: 1143 TWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKM 1202

Query: 514  LKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
             +   I  ++     M+ L  + G L  +  +   M +E D   W AL+ A   HG
Sbjct: 1203 QEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 224/482 (46%), Gaps = 46/482 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +R+G +  A  +F+QI  +   +P+ Y+ ST LA C  +     G QLHA+ +
Sbjct: 183 NCLISAYARNGFFVQAFQVFMQI-GNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVV 241

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +    +   V N +L+LY     +   + VF  ++  ++ SWT                 
Sbjct: 242 KMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWT----------------- 284

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                         A I G  ++G     +  F  M +  +  + ++F+ VL+ C   + 
Sbjct: 285 --------------ASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGC-VK 329

Query: 205 EF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           +F  GR  H+ V K G +  V V  A+I MY   G + +A K F++  G    ++S+N +
Sbjct: 330 DFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQM-GRAASNVSWNAL 388

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRVG--YQVHAQAMKSGF 319
           + G     ++E+A+  F  M+   +  +E T+ ++  AC   P +    Q+H++ +KS  
Sbjct: 389 IAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNV 448

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E+   V+++ I  Y+ CG ++ A  +F ++ + D+VSWN++I  Y+Q      AI    +
Sbjct: 449 ESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRK 508

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M   G +P   TF ++L++   SG + E  E   + V    I       + ++    +  
Sbjct: 509 MIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAG 568

Query: 436 RIKQAYQIFHNMSPRNIIT-WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           +++ A      ++ +   + W  L+     N   +Q  ++ +E ++ +L P++ T+ V L
Sbjct: 569 QLENALDFIKKLTMKPTASIWRPLLAACRYNS-NLQMAEYVAEKIL-DLEPNDATVYVTL 626

Query: 495 SS 496
           S+
Sbjct: 627 SN 628



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 67/379 (17%)

Query: 32   SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
            +R G Y++AL  F ++     L+P+ + L + L AC +L +   G  +H   L+   ++ 
Sbjct: 880  ARRGFYEEALSAFSEMQK-EGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD 938

Query: 92   PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             ++ + ++ +Y                               +K GHV+ AC VFD + D
Sbjct: 939  AYIISALIYMY-------------------------------SKCGHVEKACRVFDWIVD 967

Query: 152  RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
            +DL V NAM++G  ++G+    + L ++M +  V+ +  S+ +++    AG  + G +  
Sbjct: 968  KDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLI----AGFSQVGDK-- 1021

Query: 212  SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
                      +VS V  L+T                 A G   D +S+  ++ G      
Sbjct: 1022 ---------SMVSEVFRLMT-----------------ANGVEPDVVSWTSVISGFVQNFH 1055

Query: 272  VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNA 328
              E    F++ML     PS +T  S++ AC      R G ++H  AM  G E    V +A
Sbjct: 1056 NHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSA 1115

Query: 329  AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
             + MY+ CG I EA ++F  + E++ V+WN++I  YA       AI  + +M+    + D
Sbjct: 1116 LVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLD 1175

Query: 389  EFTFGSLLASSGFIEMVEM 407
              TF ++L +     MVE+
Sbjct: 1176 HLTFTAVLNACSHAGMVEL 1194


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 206/769 (26%), Positives = 386/769 (50%), Gaps = 74/769 (9%)

Query: 28  LANLSRSGHYQDALHLFVQ--IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           + +L +   Y +AL L+ +  ++++    P +      L ACA+L N  +G  +H+  + 
Sbjct: 28  IKSLVQQRQYIEALKLYTKSPVYTTRFTYPSL------LKACASLSNLQYGKTIHSSIIT 81

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-----DVYSWTTFLSACTKMGHVD 140
            GL +  ++ ++++++Y          +VF ++        DV  W + +    + G ++
Sbjct: 82  TGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLE 141

Query: 141 -------------------------------------------YACE-------VFDKMP 150
                                                      + C        +F K+ 
Sbjct: 142 EGMVQFGRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLK 201

Query: 151 DR-DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGR 208
           DR ++  +N MI G  ENG  +  +  +      +V+  + SF   LS C  G  + FG+
Sbjct: 202 DRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGK 261

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H    K GF     V  +L+TMY  C  +  A KVF E      +   +N ++     
Sbjct: 262 QVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIEL--WNALISAYVG 319

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSV 325
            G   +AL  ++ M + ++     T ++V+++        +G  +H + +K   ++  ++
Sbjct: 320 NGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITI 379

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            +A +TMYS  G  + A  IF+ ++E+D+V+W ++IS + Q    + A+  +  M++  +
Sbjct: 380 QSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLV 439

Query: 386 RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +PD     S++++   +E V++   IH FV  +G+  ++ V+++L+  Y+K    ++A  
Sbjct: 440 KPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGN 499

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF +M  +N++ WN++I+ +  N  P   +  FS++L ++L PD  + +  L++ + +++
Sbjct: 500 IFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAA 559

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK +HGY+++  +   + + N +I +Y KCG L  +  +F  + EK+ ++WN++I  
Sbjct: 560 LLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGG 619

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y  HGE  +A+  F  M+  G IKPD  TF ++LS+C+H+GL+++G  +F+ M   +G  
Sbjct: 620 YGSHGECSKAIELFDEMRSSG-IKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIE 678

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   ++DL GRAG L +A   + +  ++     W +L  +C  H NL LG ++A  
Sbjct: 679 PRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANK 738

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LL  E  K S YV L N+Y  A LW+  AN+R  +K  G+ K PGCSWI
Sbjct: 739 LLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWI 787


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 213/641 (33%), Positives = 355/641 (55%), Gaps = 32/641 (4%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RV     + D+Y  +  +SA  + G +D A ++F  + +R+    N +I G  +    + 
Sbjct: 295 RVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEE 354

Query: 173 GIGLFREMH-KLDVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL-VSVV 226
            +G+F        V  D +    S  +  S+ + GL+  GR++H  + ++G   L +++ 
Sbjct: 355 AVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMR-GREVHGHILRTGLIDLKIALS 413

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           N L+ MY  CG +  A +VF      +C  D +S+N ++  L   G  E A++ +  M  
Sbjct: 414 NGLVNMYAKCGAIDKASRVFR----LLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQ 469

Query: 285 ASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             + PS    +S +S+C   R+   G QVH  A+K G +  TSVSNA + MY  CG   E
Sbjct: 470 GCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSE 529

Query: 342 ACMIFARLQEKDIVSWNT----MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
           +  IF  + E DIVSWN+    M+S++A       ++  +  M   G+ P++ TF +LL+
Sbjct: 530 SWEIFNSMAEHDIVSWNSIMGVMVSSHAPT---AESVEVFSNMMRSGLTPNKVTFVNLLS 586

Query: 398 SSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NII 453
           +   + ++E+   +HA V  +G I +  V NAL+S YAK+  +    Q+F +MS R + +
Sbjct: 587 ALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAV 646

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN++I+G++ NG   + +     ++ S    D  T S+ L++CA +++L  G ++H + 
Sbjct: 647 SWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFG 706

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           +++ L S + + +A++ +Y+KCG +D + +VFN M +K+  SWN++IS YA+HG G++A+
Sbjct: 707 IRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKAL 766

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F+ MQ  G   PD  TF +VLSACSHAGLVD G   F+ M+ D+G +P  +H SC++D
Sbjct: 767 EIFEEMQRNGAC-PDHVTFVSVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVID 824

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN---LRLGRIIAGLLLEREQDK 690
           LLGRAG L + +  IN   ++  +  W  +  AC    +   + LG+  + +LLE E   
Sbjct: 825 LLGRAGKLLKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQN 884

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           P  YVL SN YAA G WE+ A  R  +    + K+ G SW+
Sbjct: 885 PVNYVLASNFYAATGRWEDTAKARAAMGGAAMKKEAGQSWV 925



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 195/727 (26%), Positives = 344/727 (47%), Gaps = 81/727 (11%)

Query: 34  SGHYQDALHLFVQI--HSSHKLKPDIYSLSTTLAAC--ANLRNAAFGNQLHAYALRAGLK 89
           SG   +A  +F  +    S   +P  ++  + L AC  A     AF  Q+H    +    
Sbjct: 135 SGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYA 194

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           +   V N ++S+Y N                            C+ +G    A +VFD  
Sbjct: 195 SNTTVCNALISMYGN----------------------------CS-VGLPLQAQQVFDTT 225

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREM----HKLDVRRDNYSFASV-----LSVCD 200
           P RDL  +NA+++   + GY      LF  M      +++R + ++F S+     LS C 
Sbjct: 226 PVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCS 285

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +G+L+   Q+ + V KSG S  + V +AL++ +   G + +A  +F   K    + ++ N
Sbjct: 286 SGVLD---QVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKER--NAVTLN 340

Query: 261 VMMDGLASVGRVEEALIRF---RDMLVASLRPSELTFVSVMSACLCPRV-------GYQV 310
            ++ GL      EEA+  F   RD  V +      TFV ++SA     +       G +V
Sbjct: 341 GLIVGLVKQHCSEEAVGIFMGTRDSFVVNTD----TFVVLLSAVAEFSIPEDGLMRGREV 396

Query: 311 HAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           H   +++G  +   ++SN  + MY+ CG ID+A  +F  L  +D VSWNT+IS   Q   
Sbjct: 397 HGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGF 456

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNA 426
              A++ Y  M+   I P  F   S L+S   + ++   + +H      G+  +  VSNA
Sbjct: 457 CEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNA 516

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV-QGLQHFSELLMSELRP 485
           L+  Y       ++++IF++M+  +I++WN+++   + +  P  + ++ FS ++ S L P
Sbjct: 517 LVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTP 576

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           ++ T    LS+ + +S L  GKQ+H  VLK+  I   ++ NA+++ YAK GD+D   ++F
Sbjct: 577 NKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLF 636

Query: 546 NMMI-EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           + M   +D +SWN++IS Y  +G  +E + C   M    ++  D  TF+ VL+AC+    
Sbjct: 637 SSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQML-DCCTFSIVLNACASVAA 695

Query: 605 VDDGTRI--FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           ++ G  +  F         +  E   S +LD+  + G +D A +V NS   Q    +W +
Sbjct: 696 LERGMEMHAFGIRSQLESDVVVE---SALLDMYSKCGRIDYASKVFNSMS-QKNEFSWNS 751

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDK--PSVYVLLSNIYAA--AGLWEEAANIRELLK 718
           + S  A HG   LG     +  E +++   P     +S + A   AGL +   +  E+++
Sbjct: 752 MISGYARHG---LGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMME 808

Query: 719 RTGVIKQ 725
             G++  
Sbjct: 809 DHGILPH 815



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 175/628 (27%), Positives = 298/628 (47%), Gaps = 65/628 (10%)

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           A   +LH   ++ GL     ++N +++LY     L + ++VF  +   +  SWT  +S  
Sbjct: 73  AAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGY 132

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
              G  D A  VF            AM+   +E                   R   ++F 
Sbjct: 133 VLSGITDEAFRVF-----------KAMLWEGSEFS-----------------RPTPFTFG 164

Query: 194 SVLSVC-DAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC--GNVVDACKVFEE 248
           SVL  C DAG  LL F  Q+H LV+K+ ++   +V NALI+MY NC  G  + A +VF+ 
Sbjct: 165 SVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDT 224

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML----VASLRPSELTFVSVMSAC--- 301
               V D I++N +M   A  G V      F  ML       LRP+E TF S+++A    
Sbjct: 225 TP--VRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLS 282

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
                V  QV A+ +KSG  +   V +A ++ ++  G +DEA  IF  L+E++ V+ N +
Sbjct: 283 SCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLNGL 342

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEF-----TFGSLLASSGFIEMVE-------MI 408
           I    +++    A+  ++     G R D F     TF  LL++     + E        +
Sbjct: 343 IVGLVKQHCSEEAVGIFM-----GTR-DSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREV 396

Query: 409 HAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           H  +   G+I   I +SN L++ YAK   I +A ++F  +  R+ ++WNT+I+    NGF
Sbjct: 397 HGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGF 456

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               + ++  +    + P  +     LSSCA +  L  G+Q+H   +K  L    S+ NA
Sbjct: 457 CEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNA 516

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY-AQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +Y  CG    S  +FN M E D +SWN+++    + H    E+V  F  M   G + 
Sbjct: 517 LVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMRSG-LT 575

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P++ TF  +LSA S   +++ G ++  ++V  +G I      + ++    ++G +D  E+
Sbjct: 576 PNKVTFVNLLSALSPLSVLELGKQVH-AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQ 634

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLR 674
           + +S   +  + +W ++ S    +G+L+
Sbjct: 635 LFSSMSGRRDAVSWNSMISGYIYNGHLQ 662



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 261/563 (46%), Gaps = 50/563 (8%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF--GNQL 79
           + LN  +  L +    ++A+ +F+    S  +  D + +  +  A  ++       G ++
Sbjct: 337 VTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREV 396

Query: 80  HAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           H + LR GL      ++N ++++Y     +    RVF  +   D  SW T +S   + G 
Sbjct: 397 HGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGF 456

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            + A           +  Y  M  GC                    +   N++  S LS 
Sbjct: 457 CEGA-----------MMNYCMMRQGC--------------------ISPSNFAAISGLSS 485

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C +  LL  G+Q+H    K G     SV NAL+ MY +CG   ++ ++F     +  D +
Sbjct: 486 CASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEH--DIV 543

Query: 258 SYNVMMDGLASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHA 312
           S+N +M  + S      E++  F +M+ + L P+++TFV+++SA L P     +G QVHA
Sbjct: 544 SWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSA-LSPLSVLELGKQVHA 602

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQR-NLG 370
             +K G     +V NA ++ Y+  G +D    +F+ +   +D VSWN+MIS Y    +L 
Sbjct: 603 VVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +    +L M S  +  D  TF  +L   AS   +E    +HAF   + + +++ V +AL
Sbjct: 663 ETMDCVWLMMHSNQML-DCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESAL 721

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+K  RI  A ++F++MS +N  +WN++I+G+  +G   + L+ F E+  +   PD 
Sbjct: 722 LDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDH 781

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T    LS+C+    +  G      +  + ++  +   + +I L  + G L       N 
Sbjct: 782 VTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINR 841

Query: 548 M-IEKDTISWNALISAYAQHGEG 569
           M ++ +T+ W  ++ A  Q  +G
Sbjct: 842 MPMKPNTLIWRTVLVACRQSKDG 864



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 20/270 (7%)

Query: 393 GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           G LL   G     E +H  +   G+  ++ +SN L++ YAK  R+  A Q+F  M  RN 
Sbjct: 63  GLLLPRRGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNA 122

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLM--SEL-RPDEYTLSVALSSC--ARISSLRHGK 507
           ++W  L++G++L+G   +  + F  +L   SE  RP  +T    L +C  A    L    
Sbjct: 123 VSWTCLVSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAV 182

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKC--GDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           Q+HG V K    S  ++ NA+I++Y  C  G    + +VF+    +D I+WNAL+S YA+
Sbjct: 183 QVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAK 242

Query: 566 HGEGKEAVSCFKAM---QDVGRIKPDQATFTAV-----LSACSHAGLVDDGTRIFDSMVN 617
            G      + F AM        ++P++ TF ++     LS+CS   L     R+  S  +
Sbjct: 243 KGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSS 302

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
              ++      S ++    R G LDEA+ +
Sbjct: 303 SDLYVG-----SALVSAFARHGMLDEAKDI 327


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 337/619 (54%), Gaps = 18/619 (2%)

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
           T L+A  ++G    A  + D+MP R+   +N +I   +  G   + +       +  V  
Sbjct: 48  TLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDV 107

Query: 188 DNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D +S+A+ L+ C  AG L  GR +H+L    G S  V V N+L++MY  CG + +A +VF
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---- 302
           + A+    D +S+N ++ G    G  EE +  F  M    +  +     SV+  C     
Sbjct: 168 DVAEER--DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
               +   VH   +K+G ++   + +A I MY+  G + EA  +F  +QE ++V +NTMI
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 362 STYAQ------RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFV 412
           + + +      + +   A+  Y E+QS G++P EFTF S+L +   +G++E  + IH  V
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
                  +  + +ALI  Y  +  ++  ++ F +    +I+TW  +++G + N    + L
Sbjct: 346 IKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKAL 405

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F E L + L+PD +T+S  +++CA ++  R G+QI  +  K+       +GN+ + +Y
Sbjct: 406 SLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           A+ GD+D + R F  M   D +SW+A+IS +AQHG  ++A+  F  M D  ++ P++ TF
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITF 524

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             VL+ACSH GLVD+G R +++M  DYG  P   H +C++DLLGRAG L +AE  I++  
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSI 584

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
             A    W +L ++C  H +L  G+++A  ++E E    + YV+L N+Y  AG    A+ 
Sbjct: 585 FHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK 644

Query: 713 IRELLKRTGVIKQPGCSWI 731
            R+L+K+ GV K+PG SWI
Sbjct: 645 TRDLMKQRGVKKEPGLSWI 663



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 237/528 (44%), Gaps = 50/528 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D +S +  LAAC+   +   G  +HA A+  GL +   V+N+++S+Y             
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMY------------- 154

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                          S C +MG    A  VFD   +RD   +N++++G    G  +  + 
Sbjct: 155 ---------------SKCGEMGE---ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA---GLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +F  M +  +  ++++  SV+  C     G ++    +H  V K+G    V +V+A+I M
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDM 256

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV------EEALIRFRDMLVAS 286
           Y   G +V+A  +F   +    + + +N M+ G      V       EAL  + ++    
Sbjct: 257 YAKKGALVEAAALFRSVQEP--NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314

Query: 287 LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           ++P+E TF SV+ AC        G Q+H Q +K  F+    + +A I +Y + G +++  
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
             F    + DIV+W  M+S   Q  L   A+  + E    G++PD FT  S++   AS  
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
                E I  F   +G      + N+ +  YA++  +  A + F  M   ++++W+ +I+
Sbjct: 435 VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVIS 494

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLI 519
               +G     L  F E++ +++ P+E T    L++C+    +  G + +  + K+  L 
Sbjct: 495 CHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLS 554

Query: 520 SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
             +     ++ L  + G L D    + N +   D + W +L+++   H
Sbjct: 555 PTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIH 602



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 177/354 (50%), Gaps = 18/354 (5%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  +  Y   G    A  +   +  ++ VS+N +I  Y++  L   ++      +  G+ 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D F++ + L   + +G +     +HA   ++G+ + + VSN+L+S Y+K   + +A ++
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI--S 501
           F     R+ ++WN+L++G++  G   + ++ F+ +    +  + + L   +  C+     
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++   + +HG V+K  L S + L +AMI +YAK G L  +  +F  + E + + +N +I+
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286

Query: 562 AYAQHGE--GK----EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            + +     GK    EA++ +  +Q  G ++P + TF++VL AC+ AG ++ G +I   +
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRG-MQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSAC 667
           +  Y F   +   S ++DL   +G +++  R   S     + D   W A+ S C
Sbjct: 346 IK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS---SPKHDIVTWTAMVSGC 395



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 150/353 (42%), Gaps = 57/353 (16%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL L+ ++ S   ++P  ++ S+ L AC       FG Q+H   ++   +    + + +
Sbjct: 302 EALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSAL 360

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + LY N+  +    R F      D+ +WT                               
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTA------------------------------ 390

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
            M++GC +N   +  + LF E     ++ D ++ +SV++ C +  +   G Q+    TKS
Sbjct: 391 -MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKS 449

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     + N+ + MY   G+V  A + F+E + +  D +S++ ++   A  G   +AL 
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESH--DVVSWSAVISCHAQHGCARDALH 507

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN---------- 327
            F +M+ A + P+E+TF+ V++AC         H   +  G   Y +++           
Sbjct: 508 FFDEMVDAKVVPNEITFLGVLTAC--------SHGGLVDEGLRYYETMTKDYGLSPTIKH 559

Query: 328 --AAITMYSSCGKI-DEACMIFARLQEKDIVSWNTMI-STYAQRNLGRSAILA 376
               + +    G++ D    I   +   D V W +++ S    R+L R  ++A
Sbjct: 560 CTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVA 612



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 89/178 (50%), Gaps = 15/178 (8%)

Query: 37  YQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           ++ AL LF   H S    LKPD++++S+ + ACA+L  A  G Q+  +A ++G   +  +
Sbjct: 401 HEKALSLF---HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD-RD 153
            N+ + +Y  + D+ +  R F E+++ DV SW+  +S   + G    A   FD+M D + 
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 154 LP---VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR 208
           +P    +  ++T C+  G  D G+  +  M K      +Y  +  +  C   +   GR
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMTK------DYGLSPTIKHCTCVVDLLGR 569


>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
 gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
          Length = 702

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 221/672 (32%), Positives = 352/672 (52%), Gaps = 79/672 (11%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           +  ++ + +S   K G ++ A  +FDKMP R+L  +N M++G   NG  D    LF  M 
Sbjct: 5   NTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMP 64

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVT---KSGFSCLVSVVNALITMYFNCG 237
               RRD +S+  +++     G +E  R+L   +    + G +C     NA+I+ Y   G
Sbjct: 65  ----RRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACW----NAMISGYVKKG 116

Query: 238 NVVDACKVFEEAK------------GYVC-----------------DHISYNVMMDGLAS 268
            V +A ++F+E              GY                   D +S+N+M+DG   
Sbjct: 117 RVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQ 176

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-N 327
           VG ++ A   F++    + +P+ +++V+++S     R G  + ++ +     +   VS N
Sbjct: 177 VGDLDSAWKFFQE----TQKPNVVSWVTMLSGF--ARNGNILESRRLFDQMPSRNIVSWN 230

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ----------------RNLG- 370
           A I+ Y    +IDEA  +F  + E+D VSW TMI+ Y +                RN+G 
Sbjct: 231 AMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGA 290

Query: 371 -RSAILAYLEMQSVGIRP---------DEFTFGSLLASSGFIEMVEMIHAFVFINGIITN 420
             + I  Y++   V             D   + +++A  G+     +  A      ++  
Sbjct: 291 QTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIA--GYAHHGRINEALCLSKRMVNK 348

Query: 421 IQVS-NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
             V+ N +IS YA+  ++ +A +IF  M  R++++WN+LI GF+LNG  +  L+ F+ + 
Sbjct: 349 DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMG 408

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
               +PD+ + +  LSSCA I++L+ G Q+H  V+K   ++ + + NA+IT+YAKCG + 
Sbjct: 409 HEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRIL 468

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  VFN +   D ISWN+LI  YA +G GKEA+  F+ M   G + PD+ TF  +LSAC
Sbjct: 469 EAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEG-MAPDEVTFIGILSAC 527

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           +HAG+VD G ++F  M   Y   P  +H +CM+DLLGR G LDEA  ++    ++A +  
Sbjct: 528 NHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGV 587

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W AL  AC AHGNL LGR+ A  L E E  K S YVLLSNI+A A  W E   +R L+  
Sbjct: 588 WGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNA 647

Query: 720 TGVIKQPGCSWI 731
           +  +K+PGCSW+
Sbjct: 648 SSTVKEPGCSWV 659



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 187/406 (46%), Gaps = 44/406 (10%)

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E  T   N+ I++Y+  G+I+ A  +F ++  +++VSWNTM+S Y        A   ++ 
Sbjct: 3   EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFV- 61

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII----TNIQVSNALISAYAKNE 435
                I P    F   L  + +    E+  A    + +       +   NA+IS Y K  
Sbjct: 62  -----IMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKG 116

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           R+ +A ++F  M  +N+I+WN+++ G+  N     GL+ F+E  M E   D  + ++ + 
Sbjct: 117 RVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNE--MDE--RDVVSWNLMVD 172

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
              ++  L    +      K N++S ++    M++ +A+ G++  S R+F+ M  ++ +S
Sbjct: 173 GFIQVGDLDSAWKFFQETQKPNVVSWVT----MLSGFARNGNILESRRLFDQMPSRNIVS 228

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+ISAY Q  E  EA   F+ M +      D  ++T +++     G +D+   + + M
Sbjct: 229 WNAMISAYVQRCEIDEASRLFEEMPE-----RDSVSWTTMINGYVRIGKLDEARELLNEM 283

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGN 672
              Y  I A+   + M+    +   +DEA R    I +  +      W A+ +  A H  
Sbjct: 284 --PYRNIGAQ---TAMISGYIQCNKVDEARRFFDEIGTWDVVC----WNAMIAGYAHH-- 332

Query: 673 LRLGRIIAGLLLERE---QDKPSVYVLLSNIYAAAGLWEEAANIRE 715
              GRI   L L +    +D  +   ++S  YA  G  + A  I E
Sbjct: 333 ---GRINEALCLSKRMVNKDMVTWNTMIS-CYAQVGQMDRAVKIFE 374



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 65/267 (24%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A    +G   DAL  F  +    K KPD  S +  L++CA +     GNQLH
Sbjct: 381 LVSWNSLIAGFMLNGQNLDALKSFALMGHEGK-KPDQLSFACGLSSCATIAALQVGNQLH 439

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ G   Y  V N ++++Y     ++    VF+ I + DV SW              
Sbjct: 440 QVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADVISW-------------- 485

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            N++I G   NGY    + LF EM    +  D  +F  +LS C+
Sbjct: 486 -----------------NSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACN 528

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AG+++ G +L        F C+ S V A+  +                A+ Y C     
Sbjct: 529 HAGMVDHGLKL--------FKCM-SKVYAIEPL----------------AEHYAC----- 558

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVAS 286
             M+D L  VGR++EA    R M V +
Sbjct: 559 --MVDLLGRVGRLDEAFEIVRGMKVKA 583


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 216/712 (30%), Positives = 362/712 (50%), Gaps = 48/712 (6%)

Query: 34  SGHYQDALHLFV----QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SGH Q  L   V    +   S  L P   + ++ L+A AN++    G Q+HA A+  GL 
Sbjct: 298 SGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLD 357

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           A   V +++++LY         K VF                        D +CE     
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVF------------------------DLSCE----- 388

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
             +++ ++NAM+TG  +N   +  I +F+ M +  ++ D ++F S+L  C        G+
Sbjct: 389 --KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGK 446

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H +  K+     + V NA + MY   G + DA  +F        D IS+N +  GLA 
Sbjct: 447 QVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIP--YKDSISWNALTVGLAQ 504

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
               EEA+   + M +  + P +++F + ++AC   R    G Q+H  A+K G  +  +V
Sbjct: 505 NLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAV 564

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            ++ I +YS  G ++ +  IFA++    IV  N +I+ + Q N    AI  + ++   G+
Sbjct: 565 GSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGL 624

Query: 386 RPDEFTFGSLLAS-SGFIE--MVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAY 441
           +P   TF S+L+  SG +   + + +H +   +G++  +  +  +L   Y K++ ++ A 
Sbjct: 625 KPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDAN 684

Query: 442 QIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           ++   M   +N+  W  +I+G+  NG+    L  F  +    +R DE T +  L +C+ +
Sbjct: 685 KLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDV 744

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNAL 559
           ++   GK+IHG + K+   S  +  +A+I +Y+KCGD+  S   F  +  K D + WN++
Sbjct: 745 TAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSM 804

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  +A++G   EA+  F+ M+++ +IKPD+ TF  VL AC+H+GL+ +G   F  M   Y
Sbjct: 805 IVGFAKNGYADEALLLFQKMEEL-QIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVY 863

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P  DH +C +DLLGR G+L EA+  I+    +     W    +AC  H +   G+I 
Sbjct: 864 GLTPRLDHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIA 923

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L+E E    S YVLLS+++AA G W EA   RE ++  GV K PGCSWI
Sbjct: 924 ARKLVELEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 187/655 (28%), Positives = 309/655 (47%), Gaps = 54/655 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RSG   D L  F  I  +   +PD + L+  L+AC+ +   A+G Q+H   +++G  + 
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT------------------------ 127
                 ++ +Y    D+ + +RVF  I  PD   W+                        
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 128 -----------TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                      T +S     G +D+A  +  KMP      +NA+I+G  ++G E   +GL
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 312

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +++M    +     +FAS+LS   A +  F  G+Q+H+     G    V V ++LI +Y 
Sbjct: 313 YKDMRSWGLWPTRSTFASMLSAA-ANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYA 371

Query: 235 NCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            CG   DA  VF+ +    C+   + +N M+ G       EEA+  F+ M+  +L+  E 
Sbjct: 372 KCGCPSDAKNVFDLS----CEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEF 427

Query: 293 TFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TFVS++ AC       +G QVH   +K+  +    V+NA + MYS  G I +A  +F+ +
Sbjct: 428 TFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLI 487

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
             KD +SWN +    AQ      A+     M+  GI PD+ +F + + +   I   E   
Sbjct: 488 PYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGK 547

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH      GI +N  V ++LI  Y+K+  ++ + +IF  +   +I+  N LI GF+ N 
Sbjct: 548 QIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNN 607

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLG 525
              + +Q F ++L   L+P   T S  LS C+   +   GKQ+H Y LK+  L     LG
Sbjct: 608 NEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLG 667

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            ++  +Y K   L+ + ++   M + K+   W A+IS YAQ+G G  ++  F  M+    
Sbjct: 668 VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHC-N 726

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           ++ D+ATF +VL ACS      DG  I   ++   GF   E   S ++D+  + G
Sbjct: 727 VRSDEATFASVLKACSDVTAFADGKEIH-GLITKSGFGSYETATSALIDMYSKCG 780



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 153/521 (29%), Positives = 256/521 (49%), Gaps = 45/521 (8%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFA 193
           K G V YA        +R     +++++    +G     +G FR +      R D +  A
Sbjct: 103 KSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLA 162

Query: 194 SVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            VLS C   G+L +GRQ+H  V KSGFS  V    AL+ MY  CG+V +A +VF+   G 
Sbjct: 163 VVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFD---GI 219

Query: 253 VC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
            C D I ++ M+     VG  +EAL  F  M      P ++T V++              
Sbjct: 220 ACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI-------------- 265

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                             I+  +S G++D A  +  ++     V+WN +IS +AQ  L  
Sbjct: 266 ------------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEF 307

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASS----GFIEMVEMIHAFVFINGIITNIQVSNAL 427
           + +  Y +M+S G+ P   TF S+L+++     F+E  +M HA   ++G+  N+ V ++L
Sbjct: 308 NVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQM-HAAAVMHGLDANVFVGSSL 366

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+ YAK      A  +F     +NI+ WN ++ GF+ N  P + ++ F  ++   L+ DE
Sbjct: 367 INLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDE 426

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T    L +C  +SS   GKQ+H   +KN +   + + NA + +Y+K G +  +  +F++
Sbjct: 427 FTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSL 486

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD+ISWNAL    AQ+ E +EAV   K M+  G I PD  +F+  ++ACS+    + 
Sbjct: 487 IPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG-ITPDDVSFSTAINACSNIRATET 545

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           G +I   +   YG        S ++DL  + G ++ + ++ 
Sbjct: 546 GKQIH-CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIF 585



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 183/402 (45%), Gaps = 47/402 (11%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS--YNVMMDG 265
           R LH  + + G   L  + ++L+ +Y   G V  A      A GY  +  S   + ++  
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAW----SALGYAGERASGAASSLLSC 131

Query: 266 LASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGF 319
            A  G   + L  FR +   A  RP +     V+SAC   RVG      QVH   +KSGF
Sbjct: 132 HARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSAC--SRVGVLAYGRQVHCDVVKSGF 189

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +      A + MY+ CG +  A  +F  +   D + W++MI+ Y +    + A+  +  
Sbjct: 190 SSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSR 249

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           M  +G  PD+ T                         ++T       +IS  A + R+  
Sbjct: 250 MDKMGSAPDQVT-------------------------LVT-------IISTLASSGRLDH 277

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +   M   + + WN +I+G   +G     L  + ++    L P   T +  LS+ A 
Sbjct: 278 ATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAAN 337

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +   G+Q+H   + + L + + +G+++I LYAKCG    +  VF++  EK+ + WNA+
Sbjct: 338 MKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAM 397

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ++ + Q+   +EA+  F+ M     ++ D+ TF ++L AC++
Sbjct: 398 LTGFVQNELPEEAIRMFQYMMRY-TLQTDEFTFVSILGACTY 438



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 2/209 (0%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +   G     ++ ++L+  Y K+ R+  A+        R     ++L++    +G 
Sbjct: 78  LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137

Query: 468 PVQGLQHFSEL-LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           P   L  F  +   +  RPD++ L+V LS+C+R+  L +G+Q+H  V+K+   S +    
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCGD+  + RVF+ +   DTI W+++I+ Y + G  +EA++ F  M  +G   
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGS-A 256

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           PDQ T   ++S  + +G +D  T +   M
Sbjct: 257 PDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 195/598 (32%), Positives = 327/598 (54%), Gaps = 13/598 (2%)

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           ++FD+ P + L   N ++   + N      + LF  + +     D  S + VL VC    
Sbjct: 47  QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106

Query: 204 LEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
               G+Q+H    K GF   VSV  +L+ MY    +V D  +VF+E +  V + +S+  +
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMR--VKNVVSWTSL 164

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           + G    G  E+AL  F  M +  ++P+  TF +V+           G QVH   +KSG 
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           ++   V N+ + MYS    + +A  +F  ++ ++ VSWN+MI+ +    L   A   +  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 380 MQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  G++  +  F +   L A+   +   + +H  V  NG   ++ +  AL+ AY+K   
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 437 IKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVAL 494
           I  A+++F  M   +N+++W  +I+G++ NG   + +  F ++   E + P+E+T S  L
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVL 404

Query: 495 SSCA-RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           ++CA   +S+  GKQ H   +K+   + + + +A++T+YAK G+++ +  VF   +++D 
Sbjct: 405 NACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDL 464

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN++IS YAQHG GK+++  F+ M+    ++ D  TF  V+SAC+HAGLV++G R FD
Sbjct: 465 VSWNSMISGYAQHGCGKKSLKIFEEMRS-KNLELDGITFIGVISACTHAGLVNEGQRYFD 523

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
            MV DY  +P  +H SCM+DL  RAG L++A  +IN     A +  W  L +AC  H N+
Sbjct: 524 LMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNV 583

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +LG + A  L+  +    + YVLLSNIYA AG W+E A +R+L+    V K+ G SWI
Sbjct: 584 QLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 270/563 (47%), Gaps = 46/563 (8%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           T ++ L + N  L   SR+   ++AL+LF+ +  S     D  SLS  L  C  L +   
Sbjct: 52  TPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGS-PTDGSSLSCVLKVCGCLFDRIV 110

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H   ++ G      V  +++ +Y     +   +RVF E++  +V SWT+ L+    
Sbjct: 111 GKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA---- 166

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                      G  +NG  +  + LF +M    ++ + ++FA+V
Sbjct: 167 ---------------------------GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAV 199

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L    A G +E G Q+H++V KSG    + V N+++ MY     V DA  VF+  +    
Sbjct: 200 LGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENR-- 257

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           + +S+N M+ G  + G   EA   F  M +  ++ ++  F +V+  C   +      Q+H
Sbjct: 258 NAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLH 317

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLG 370
            Q +K+G +   ++  A +  YS C +ID+A  +F  +   +++VSW  +IS Y Q    
Sbjct: 318 CQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRT 377

Query: 371 RSAILAYLEM-QSVGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
             A+  + +M +  G+ P+EFTF S+L    A +  +E  +  H+    +G    + VS+
Sbjct: 378 DRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSS 437

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL++ YAK   I+ A ++F     R++++WN++I+G+  +G   + L+ F E+    L  
Sbjct: 438 ALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 497

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRV 544
           D  T    +S+C     +  G++    ++K+ +++  M   + M+ LY++ G L+ ++ +
Sbjct: 498 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 557

Query: 545 FNMM-IEKDTISWNALISAYAQH 566
            N M        W  L++A   H
Sbjct: 558 INKMPFPAGATIWRTLLAACRVH 580


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 225/743 (30%), Positives = 370/743 (49%), Gaps = 71/743 (9%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           +L+  L +C      A    LH   +  GL +   + NT+L  Y +   L   + +   +
Sbjct: 30  ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I  P+V +    ++   K+G +  A E+F +MP RD+  +N +++G  ++G     +  F
Sbjct: 90  ITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESF 149

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             M +  D   + ++F   +  C A G  E   QL  L+TK GF     V   ++ M+  
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209

Query: 236 CGNVVDACKVFEE----------------AKGYVCDH-------------ISYNVMMDGL 266
           CG V  A K F +                AK Y  DH             +S+N+M+  L
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  GR  EAL    DM    +R    T+ S ++AC        G Q+HAQ ++S      
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A + +Y+ CG   EA  +F+ L++++ VSW  +I  + Q      ++  + +M++ 
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389

Query: 384 GIRPDEFTFGSLLAS-SGFIEM--VEMIHAFVFINGIITNIQVSNALISAYAK------- 433
            +  D+F   ++++  S  ++M     +H+    +G    + +SN+LIS YAK       
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449

Query: 434 -------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
                   ER                 I +A + F  MS RN+ITWN ++  ++ +G   
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509

Query: 470 QGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            GL+ +S +L   ++ PD  T       CA + + + G QI G+ +K  LI   S+ NA+
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAV 569

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           IT+Y+KCG +  + ++F+ +  KD +SWNA+I+ Y+QHG GK+A+  F  M   G  KPD
Sbjct: 570 ITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKG-AKPD 628

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             ++ AVLS+CSH+GLV +G   FD +  D+   P  +H SCM+DLL RAG L EA+ +I
Sbjct: 629 YISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLI 688

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
           +   ++  ++ W AL SAC  HGN  L  + A  L + +      Y+LL+ IYA AG   
Sbjct: 689 DEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSV 748

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           ++A +R+L++  G+ K PG SW+
Sbjct: 749 DSAQVRKLMRDKGIKKNPGYSWM 771



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 305/631 (48%), Gaps = 51/631 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +SG + DA+  FV +  S    P+ ++    + +C  L       QL     
Sbjct: 130 NTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLT 189

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +  P VA  I+ ++     +    + FS+I+ P V+   + L+   K   VD+A E
Sbjct: 190 KFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALE 249

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F+ MP+RD+  +N M++  +++G     + +  +MH   VR D+ ++ S L+ C     
Sbjct: 250 LFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSS 309

Query: 204 LEFGRQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           L +G+QLH+ V +S   C+   V +A++ +Y  CG   +A +VF   +    + +S+ V+
Sbjct: 310 LGWGKQLHAQVIRS-LPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDR--NTVSWTVL 366

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKS 317
           + G    G   E+L  F  M    +   +    +++S C     +C  +  Q+H+ ++KS
Sbjct: 367 IGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMC--LARQLHSLSLKS 424

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGRS---- 372
           G      +SN+ I+MY+ CG +  A  IF+ ++E+DIVSW  M++ Y+Q  N+G++    
Sbjct: 425 GHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFF 484

Query: 373 ------------AIL-AYLE--------------MQSVGIRPDEFTFGSLL---ASSGFI 402
                       A+L AY++              +    + PD  T+ +L    A  G  
Sbjct: 485 DGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGAN 544

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           ++ + I       G+I +  V NA+I+ Y+K  RI +A +IF  +S +++++WN +I G+
Sbjct: 545 KLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGY 604

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK- 521
             +G   Q ++ F ++L    +PD  +    LSSC+    ++ GK     + +++ +S  
Sbjct: 605 SQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPG 664

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQ 580
           +   + M+ L A+ G+L  +  + + M  K T   W AL+SA   HG  + A    K + 
Sbjct: 665 LEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLF 724

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D+    PD   +  +    + AG   D  ++
Sbjct: 725 DLD--SPDSGGYMLLAKIYADAGKSVDSAQV 753


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 227/745 (30%), Positives = 373/745 (50%), Gaps = 75/745 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           + +  L +C      A    LH   +  GL +   + NT+L  Y +   L   +R+   +
Sbjct: 26  AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I +P+V +    L+   K+G +  A E+F +MP RD+  +N +++G  ++    + +  F
Sbjct: 86  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             MH+  D   + ++ A  +  C A G      QL ++V K        V  AL+ M+  
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 205

Query: 236 CGNVVDACKVFEEAK------------GYV----CDH-------------ISYNVMMDGL 266
           CG V  A ++F   K            GYV     DH             +S+N+M+  L
Sbjct: 206 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 265

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  GRV EAL    DM    +R    T+ S ++AC      R G Q+HAQ +++      
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A + +Y+  G   EA  +F  L +++ V+W  +IS + Q      ++  + +M++ 
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 385

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK----- 433
            +  D+F   +L+  SG    +++     +H+    +G I  + VSN+LIS YAK     
Sbjct: 386 LMTLDQFALATLI--SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 443

Query: 434 ---------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
                    NE+                 + +A + F  MS +N+ITWN ++  ++ +G 
Sbjct: 444 SAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGA 503

Query: 468 PVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              GL+ +  +L  E +RPD  T       CA + + + G QI G  +K  LI   S+ N
Sbjct: 504 EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 563

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+IT+Y+KCG +  + +VF+ +  KD +SWNA+I+ Y+QHG GK+A+  F  +   G  K
Sbjct: 564 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG-AK 622

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  ++ AVLS CSH+GLV +G   FD M   +   P  +H SCM+DLLGRAG+L EA+ 
Sbjct: 623 PDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKD 682

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I+   ++  ++ W AL SAC  HGN  L  + A  + E +      Y+L++ IYA AG 
Sbjct: 683 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 742

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
            +++A IR+L++  G+ K PG SW+
Sbjct: 743 SDDSAQIRKLMRDKGIKKNPGYSWM 767



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 303/636 (47%), Gaps = 61/636 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +S  Y  +L  F+ +H S    P+ ++L+  + +C  L   +   QL A   
Sbjct: 126 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 185

Query: 85  RAGLKAYPHVANTILSLYK--NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +   +    VA  ++ ++    A DL S  R+F  I+ P ++   + L+   K   VD+A
Sbjct: 186 KFDSQDDSEVAAALVDMFVRCGAVDLAS--RLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 243

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            E+FD MP+RD+  +N M++  +++G     + +  +M    VR D+ ++ S L+ C   
Sbjct: 244 LELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARL 303

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG-----YVCDH 256
             L +G+QLH+ V ++       V +AL+ +Y   G        F+EAKG     +  ++
Sbjct: 304 SSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSG-------CFKEAKGVFNSLHDRNN 356

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR----VGYQVHA 312
           +++ V++ G    G   E++  F  M    +   +    +++S C C R    +G Q+H+
Sbjct: 357 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHS 415

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGR 371
             +KSG      VSN+ I+MY+ C  +  A  IF  + EKDIVSW +MI+ Y+Q  N+ +
Sbjct: 416 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 475

Query: 372 S----------------AIL-AYLE--------------MQSVGIRPDEFTFGSLL---A 397
           +                A+L AY++              +    +RPD  T+ +L    A
Sbjct: 476 AREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCA 535

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             G  ++ + I       G+I +  V+NA+I+ Y+K  RI +A ++F  ++ ++I++WN 
Sbjct: 536 DLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 595

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-N 516
           +I G+  +G   Q ++ F ++L    +PD  +    LS C+    ++ GK     + + +
Sbjct: 596 MITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAH 655

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSC 575
           N+   +   + M+ L  + G L  +  + + M  K T   W AL+SA   HG  + A   
Sbjct: 656 NISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELA 715

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            K + ++    PD  ++  +    + AG  DD  +I
Sbjct: 716 AKHVFELD--SPDSGSYMLMAKIYADAGKSDDSAQI 749



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 4/170 (2%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S++ ++  N  L    + G  +D L ++  + S   ++PD  +  T    CA+L     G
Sbjct: 484 SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLG 543

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           +Q+    ++ GL     VAN ++++Y     ++  ++VF  +   D+ SW   ++  ++ 
Sbjct: 544 DQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQH 603

Query: 137 GHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           G    A E+FD +  R    D   Y A+++GC+ +G    G   F  M +
Sbjct: 604 GMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 653


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 227/745 (30%), Positives = 373/745 (50%), Gaps = 75/745 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF-SE 117
           + +  L +C      A    LH   +  GL +   + NT+L  Y +   L   +R+   +
Sbjct: 6   AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I +P+V +    L+   K+G +  A E+F +MP RD+  +N +++G  ++    + +  F
Sbjct: 66  IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125

Query: 178 REMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             MH+  D   + ++ A  +  C A G      QL ++V K        V  AL+ M+  
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVR 185

Query: 236 CGNVVDACKVFEEAK------------GYV----CDH-------------ISYNVMMDGL 266
           CG V  A ++F   K            GYV     DH             +S+N+M+  L
Sbjct: 186 CGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  GRV EAL    DM    +R    T+ S ++AC      R G Q+HAQ +++      
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V++A + +Y+  G   EA  +F  L +++ V+W  +IS + Q      ++  + +M++ 
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAE 365

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK----- 433
            +  D+F   +L+  SG    +++     +H+    +G I  + VSN+LIS YAK     
Sbjct: 366 LMTLDQFALATLI--SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 423

Query: 434 ---------NER-----------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
                    NE+                 + +A + F  MS +N+ITWN ++  ++ +G 
Sbjct: 424 SAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGA 483

Query: 468 PVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              GL+ +  +L  E +RPD  T       CA + + + G QI G  +K  LI   S+ N
Sbjct: 484 EEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVAN 543

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+IT+Y+KCG +  + +VF+ +  KD +SWNA+I+ Y+QHG GK+A+  F  +   G  K
Sbjct: 544 AVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRG-AK 602

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  ++ AVLS CSH+GLV +G   FD M   +   P  +H SCM+DLLGRAG+L EA+ 
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I+   ++  ++ W AL SAC  HGN  L  + A  + E +      Y+L++ IYA AG 
Sbjct: 663 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
            +++A IR+L++  G+ K PG SW+
Sbjct: 723 SDDSAQIRKLMRDKGIKKNPGYSWM 747



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 303/636 (47%), Gaps = 61/636 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +S  Y  +L  F+ +H S    P+ ++L+  + +C  L   +   QL A   
Sbjct: 106 NTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQ 165

Query: 85  RAGLKAYPHVANTILSLYK--NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +   +    VA  ++ ++    A DL S  R+F  I+ P ++   + L+   K   VD+A
Sbjct: 166 KFDSQDDSEVAAALVDMFVRCGAVDLAS--RLFVRIKEPTMFCRNSMLAGYVKTYGVDHA 223

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            E+FD MP+RD+  +N M++  +++G     + +  +M    VR D+ ++ S L+ C   
Sbjct: 224 LELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARL 283

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG-----YVCDH 256
             L +G+QLH+ V ++       V +AL+ +Y   G        F+EAKG     +  ++
Sbjct: 284 SSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSG-------CFKEAKGVFNSLHDRNN 336

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR----VGYQVHA 312
           +++ V++ G    G   E++  F  M    +   +    +++S C C R    +G Q+H+
Sbjct: 337 VAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-CSRMDLCLGRQLHS 395

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGR 371
             +KSG      VSN+ I+MY+ C  +  A  IF  + EKDIVSW +MI+ Y+Q  N+ +
Sbjct: 396 LCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAK 455

Query: 372 S----------------AIL-AYLE--------------MQSVGIRPDEFTFGSLL---A 397
           +                A+L AY++              +    +RPD  T+ +L    A
Sbjct: 456 AREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCA 515

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             G  ++ + I       G+I +  V+NA+I+ Y+K  RI +A ++F  ++ ++I++WN 
Sbjct: 516 DLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNA 575

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-N 516
           +I G+  +G   Q ++ F ++L    +PD  +    LS C+    ++ GK     + + +
Sbjct: 576 MITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAH 635

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSC 575
           N+   +   + M+ L  + G L  +  + + M  K T   W AL+SA   HG  + A   
Sbjct: 636 NISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELA 695

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            K + ++    PD  ++  +    + AG  DD  +I
Sbjct: 696 AKHVFELD--SPDSGSYMLMAKIYADAGKSDDSAQI 729



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 4/170 (2%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S++ ++  N  L    + G  +D L ++  + S   ++PD  +  T    CA+L     G
Sbjct: 464 SEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLG 523

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           +Q+    ++ GL     VAN ++++Y     ++  ++VF  +   D+ SW   ++  ++ 
Sbjct: 524 DQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQH 583

Query: 137 GHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           G    A E+FD +  R    D   Y A+++GC+ +G    G   F  M +
Sbjct: 584 GMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKR 633


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 318/601 (52%), Gaps = 13/601 (2%)

Query: 141  YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            YA ++F      ++  +N  +T     G     I  F+ + +  +  D+ +   +LS   
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905

Query: 200  DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             A  L+ G Q+H+LV KS F+ +V V N+L+ MY   G V  A K F  +     D IS+
Sbjct: 906  GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP--ELDLISW 963

Query: 260  NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP------RVGYQVHAQ 313
            N M+   A      EA+  FRD+L   L+P + T  SV+ AC          +G QVH  
Sbjct: 964  NTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023

Query: 314  AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            A+K G    + VS A I +YS  GK+DEA  +     + D+ SWN ++  Y + N  R A
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083

Query: 374  ILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISA 430
            +  +  M  +GI  DE T  + + +SG +   +  + I A+    G   ++ VS+ ++  
Sbjct: 1084 LEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143

Query: 431  YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            Y K   +  A ++F  +S  + + W T+I+G++ NG     L  +  + +S ++PDEYT 
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203

Query: 491  SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            +  + + + +++L  GKQIH  V+K +      +G +++ +Y KCG +  + RVF  M  
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263

Query: 551  KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            +  + WNA++   AQHG   EA++ F+ MQ  G I+PD+ TF  VLSACSH+GL  +  +
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG-IQPDKVTFIGVLSACSHSGLFSEAYK 1322

Query: 611  IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
             FD+M   YG  P  +H SC++D LGRAG + EAE VI S   +A +  + AL  AC   
Sbjct: 1323 YFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTK 1382

Query: 671  GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            G+    + +A  LL  +    S YVLLSNIYAA+  W++  + R ++K   V K PG SW
Sbjct: 1383 GDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSW 1442

Query: 731  I 731
            I
Sbjct: 1443 I 1443



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 237/571 (41%), Gaps = 77/571 (13%)

Query: 56   DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
            D  +L   L+A     +   G Q+HA  +++       V+N+++++Y             
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMY------------- 939

Query: 116  SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              +K G V  A + F   P+ DL  +N MI+   +N  E   I 
Sbjct: 940  ------------------SKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 176  LFREMHKLDVRRDNYSFASVLSVCDAG----LLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
             FR++ +  ++ D ++ ASVL  C  G        G Q+H    K G      V  ALI 
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041

Query: 232  MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            +Y + G  +D  +     K Y  D  S+N +M G     +  +AL  F  M    +   E
Sbjct: 1042 LY-SKGGKMDEAEFLLHGK-YDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099

Query: 292  LTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            +T  + + A  C    + G Q+ A A+K GF     VS+  + MY  CG +  A  +F  
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGE 1159

Query: 349  LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
            +   D V+W TMIS Y +      A+  Y  M+  G++PDE+TF +L+ +S  +  +E  
Sbjct: 1160 ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQG 1219

Query: 407  -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
              IHA V       +  V  +L+  Y K   ++ AY++F  M  R ++ WN ++ G   +
Sbjct: 1220 KQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQH 1279

Query: 466  GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
            G   + L  F  +  + ++PD+ T    LS+C+         + + Y             
Sbjct: 1280 GHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF---SEAYKYF------------ 1324

Query: 526  NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            +AM   Y                I  +   ++ L+ A  + G  +EA +   +M      
Sbjct: 1325 DAMFKTYG---------------ITPEIEHYSCLVDALGRAGRIQEAENVIASMP----F 1365

Query: 586  KPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            K   + + A+L AC   G  +   R+ D ++
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLL 1396



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 249/593 (41%), Gaps = 73/593 (12%)

Query: 19   ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
            ++LL+ ++ + ++S    +     LF +  S        +SL  +  A A+L+    G +
Sbjct: 576  KMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSSSSQWFSLLRSAIAMADLK---LGKR 632

Query: 79   LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
             HA  + +G     ++ N ++++Y     L S ++VF +  + D+ +W + L+A  +   
Sbjct: 633  AHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFAD 692

Query: 139  VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI-GLFREMHKLDVRRDNYSFASVLS 197
              Y                        EN  E   + GL RE     + R   +    L 
Sbjct: 693  SSY------------------------ENVLEGFRLFGLLREF-GFSITRLTLAPLLKLC 727

Query: 198  VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            +  +G ++    +H    K GF   + V  AL+ +Y   G V  A  +F++      D +
Sbjct: 728  LL-SGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER--DAV 784

Query: 258  SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC------PRVGYQVH 311
             +NVM+         +EAL  F     +   P       V+            R   QV 
Sbjct: 785  LWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVK 844

Query: 312  AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            A AMK                            +F   Q  +I +WN  ++ +       
Sbjct: 845  AYAMK----------------------------MFPFDQGSNIFAWNKKLTEFLHAGQIV 876

Query: 372  SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            +AI  +  +    I  D  T   +L++   +  +++ E IHA V  +     + VSN+L+
Sbjct: 877  AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLM 936

Query: 429  SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            + Y+K   +  A + F N    ++I+WNT+I+ +  N   ++ +  F +LL   L+PD++
Sbjct: 937  NMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQF 996

Query: 489  TLSVALSSCARISSLRH---GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            TL+  L +C+      +   G Q+H Y +K  +I+   +  A+I LY+K G +D +  + 
Sbjct: 997  TLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056

Query: 546  NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
            +   + D  SWNA++  Y +  + ++A+  F  M ++G I  D+ T    + A
Sbjct: 1057 HGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG-IPIDEITLATAIKA 1108



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 35/270 (12%)

Query: 33   RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            +S   + AL  F  +H    +  D  +L+T + A   L N   G Q+ AYA++ G     
Sbjct: 1076 KSNKSRKALEHFSLMHE-MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134

Query: 93   HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
             V++ +L +Y    D+ +   +F EI  PD  +WTT +S                     
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS--------------------- 1173

Query: 153  DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
                      G  ENG ED  + ++  M    V+ D Y+FA+++        LE G+Q+H
Sbjct: 1174 ----------GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223

Query: 212  SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            + V K  +S    V  +L+ MY  CG+V DA +VF +    V   + +N M+ GLA  G 
Sbjct: 1224 ANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD--VRKVVFWNAMLLGLAQHGH 1281

Query: 272  VEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            V+EAL  FR M    ++P ++TF+ V+SAC
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 207/683 (30%), Positives = 355/683 (51%), Gaps = 16/683 (2%)

Query: 61  STTLAACANLRNAAFGNQ-LHAYALRAGLKAYPHVAN-TILSLYKNARDLVSVKRVFSEI 118
           S TLA    LR      + + A  ++ G       +N T+  L +  +   ++K V+ E+
Sbjct: 12  SRTLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALK-VYDEM 70

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            + +  S  T +S   KMG +  A  +FD MPDR +  +  ++     N + D    LFR
Sbjct: 71  PHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFR 130

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSC--LVSVVNALITMYFN 235
           +M +     D  +F ++L  C+  + +    Q+H+   K GF     ++V N L+  Y  
Sbjct: 131 QMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCE 190

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
              +  AC +FEE      D +++N ++ G    G   EA+  F  M  +  +PS+ TF 
Sbjct: 191 VRRLDLACVLFEEILDK--DSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFS 248

Query: 296 SVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
            V+ A +      +G Q+H  ++ +GF    SV N  +  YS   ++ E   +F  + E 
Sbjct: 249 GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPEL 308

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIH 409
           D VS+N +IS+Y+Q      ++  + EMQ +G     F F ++L   A+   +++   +H
Sbjct: 309 DFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVH 368

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
               +    + + V N+L+  YAK E   +A  IF ++S R+ ++W  LI+G++  G   
Sbjct: 369 CQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG 428

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
            GL+ F+++  + LR D+ T +  L + A  +SL  GKQ+H +++++  +  +  G+ ++
Sbjct: 429 AGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLV 488

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAKCG +  +++VF  M +++ +SWNALISAYA +G+G+ A+  F  M   G ++PD 
Sbjct: 489 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSG-LQPDS 547

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            +   VL ACSH G V+ GT  F +M   YG  P + H +CMLDLLGR G   EAE++++
Sbjct: 548 VSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMD 607

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK-PSVYVLLSNIYAAAGLWE 708
               +     W ++ +AC  + N  L    A  L   E+ +  + YV +SNIYAAAG WE
Sbjct: 608 EMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWE 667

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
              ++++ ++  G+ K P  SW+
Sbjct: 668 NVRHVKKAMRERGIKKVPAYSWV 690



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/545 (27%), Positives = 260/545 (47%), Gaps = 59/545 (10%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA--YPH 93
           H+ +A  LF Q+  S  L PD  + +T L  C +        Q+HA+A++ G     +  
Sbjct: 121 HFDEAFKLFRQMCRSCTL-PDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLT 179

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N +L  Y   R L                               D AC +F+++ D+D
Sbjct: 180 VCNVLLKSYCEVRRL-------------------------------DLACVLFEEILDKD 208

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLH 211
              +N +ITG  ++G     I LF +M +   +  +++F+ VL     GL +F  G+QLH
Sbjct: 209 SVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAV-VGLHDFALGQQLH 267

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L   +GFS   SV N ++  Y     V++   +F E      D +SYNV++   +   +
Sbjct: 268 GLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPE--LDFVSYNVVISSYSQAEQ 325

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
            EE+L  FR+M           F +++S        +VG QVH QA+ +  ++   V N+
Sbjct: 326 YEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNS 385

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ C   DEA +IF  L ++  VSW  +IS Y Q+ L  + +  + +M+   +R D
Sbjct: 386 LVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRAD 445

Query: 389 EFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           + TF ++L AS+GF  ++  + +HAF+  +G + N+   + L+  YAK   IK A Q+F 
Sbjct: 446 QSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFE 505

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  RN ++WN LI+ +  NG     +  F++++ S L+PD  ++   L +C+    +  
Sbjct: 506 EMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQ 565

Query: 506 GKQ-------IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWN 557
           G +       I+G   K    +       M+ L  + G    + ++ + M  E D I W+
Sbjct: 566 GTEFFQAMSPIYGITPKKKHYA------CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 619

Query: 558 ALISA 562
           ++++A
Sbjct: 620 SVLNA 624



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 202/449 (44%), Gaps = 45/449 (10%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +    + G Y +A+HLF+++  S   KP  ++ S  L A   L + A G QLH 
Sbjct: 210 VTFNTLITGYEKDGLYTEAIHLFLKMRQSGH-KPSDFTFSGVLKAVVGLHDFALGQQLHG 268

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            ++  G      V N IL  Y     ++  + +F+E                        
Sbjct: 269 LSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNE------------------------ 304

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CD 200
                  MP+ D   YN +I+  ++    +  + LFREM  +   R N+ FA++LS+  +
Sbjct: 305 -------MPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAAN 357

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
              L+ GRQ+H     +    ++ V N+L+ MY  C    +A  +F+         +S+ 
Sbjct: 358 LSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQR--STVSWT 415

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            ++ G    G     L  F  M  A+LR  + TF +V+ A        +G Q+HA  ++S
Sbjct: 416 ALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRS 475

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G        +  + MY+ CG I +A  +F  + +++ VSWN +IS YA    G +AI A+
Sbjct: 476 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAF 535

Query: 378 LEMQSVGIRPDEFT-FGSLLASS--GFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
            +M   G++PD  +  G L+A S  GF+E   E   A   I GI    +    ++    +
Sbjct: 536 TKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGR 595

Query: 434 NERIKQAYQIFHNM--SPRNIITWNTLIN 460
           N R  +A ++   M   P  I+ W++++N
Sbjct: 596 NGRFAEAEKLMDEMPFEPDEIM-WSSVLN 623



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 169/388 (43%), Gaps = 74/388 (19%)

Query: 15  NTSKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           N   EL  +  N+ +++ S++  Y+++L+LF ++      + + +  +T L+  ANL + 
Sbjct: 303 NEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRN-FPFATMLSIAANLSSL 361

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+H  A+ A   +  HV N+++ +Y         + +F  +      SWT      
Sbjct: 362 QVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWT------ 415

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                    A+I+G  + G    G+ LF +M   ++R D  +FA
Sbjct: 416 -------------------------ALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFA 450

Query: 194 SVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           +VL    AG   L  G+QLH+ + +SG    V   + L+ MY  CG++ DA +VFEE   
Sbjct: 451 TVLK-ASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 509

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              + +S+N ++   A  G  E A+  F  M+ + L+P  ++ + V+ AC         H
Sbjct: 510 R--NAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIAC--------SH 559

Query: 312 AQAMKSGFEAYTSVSNAAITMYS-SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
              ++ G E + ++S     +Y  +  K   ACM+       D+              LG
Sbjct: 560 CGFVEQGTEFFQAMS----PIYGITPKKKHYACML-------DL--------------LG 594

Query: 371 RSAILAYLE--MQSVGIRPDEFTFGSLL 396
           R+   A  E  M  +   PDE  + S+L
Sbjct: 595 RNGRFAEAEKLMDEMPFEPDEIMWSSVL 622


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 209/707 (29%), Positives = 363/707 (51%), Gaps = 45/707 (6%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R GH ++ +  F ++     ++PD YSL   L A     +  +  Q+H Y++R      P
Sbjct: 133 RFGHKKEGIAQFCRMQL-FGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDP 189

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            + + ++ +Y +    +   R+F E+++  +V +W                         
Sbjct: 190 FLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAW------------------------- 224

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQL 210
                 N MI G  ENG  +  + ++      +V+  + SF S LS C  G  + FG Q+
Sbjct: 225 ------NVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQV 278

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  + K GF     V  +L+TMY  C  V DA  VF++    V     +N M+      G
Sbjct: 279 HCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVS--VKKTELWNAMISAYVGNG 336

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
           R  + L  ++ M V  + P  LT  +V+S+C        G  +HA+ +K   ++  ++ +
Sbjct: 337 RSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQS 396

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A +TMYS CG  D+A  IF  ++ +D+V+W +MIS + Q      A+  Y  M   G +P
Sbjct: 397 ALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKP 456

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D     S++++   ++ V +   IH     +G+  ++ V+++L+  Y+K    K +  +F
Sbjct: 457 DSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVF 516

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            +M  +N++ WN++I+ +  NG P   +  FS++    L PD  +++  L S + ++ LR
Sbjct: 517 SDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLR 576

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +HGY+++  + S + L NA+I +Y KCG L  +  +F  M++ + ++WN +I+   
Sbjct: 577 KGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCG 636

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG+  +A+S F  M+  G I PD  TF ++L++C+H G +++G ++F  M  ++G  P 
Sbjct: 637 SHGDWLKAMSLFDEMRSFG-IAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPR 695

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H   ++DLLGRAG LD+A   + +  I+     W +L  +C  H N+ LG++ A  LL
Sbjct: 696 MEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLL 755

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + E  + S YV L N+Y    L + AAN+R  +K  G+ K PGCSWI
Sbjct: 756 DIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWI 802



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 171/665 (25%), Positives = 319/665 (47%), Gaps = 60/665 (9%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           ++  +  L + G Y DAL    Q +S + L    ++  + L AC  L N  +G  +H+  
Sbjct: 20  IDPKIVTLVQQGQYVDAL----QFYSRNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTI 75

Query: 84  LRAGL-KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +  G   + P++  ++++ Y                                K G    A
Sbjct: 76  ITKGFFYSDPYITTSLINFY-------------------------------FKCGSFGNA 104

Query: 143 CEVFDKMPD-----RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            +VFDK+P+     +D+  +N+++ G    G++  GI  F  M    VR D YS   +L 
Sbjct: 105 VKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG 164

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCD 255
             D G L + +Q+H    +  F     + + LI MYF+CG  +DA ++F+E   KG V  
Sbjct: 165 ASD-GHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNV-- 221

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVH 311
            +++NVM+ G    G  E +L  +      +++    +F S +SAC C       G QVH
Sbjct: 222 -VAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSAC-CQGEFVSFGMQVH 279

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +K GFE    V  + +TMYS C  +++A  +F ++  K    WN MIS Y       
Sbjct: 280 CDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSY 339

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALI 428
             +  Y +M+ + I PD  T  ++L+S    G  +   +IHA +    I +N+ + +AL+
Sbjct: 340 DGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALL 399

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + Y+K      A  IF+ +  R+++ W ++I+GF  N   ++ L+ ++ + +   +PD  
Sbjct: 400 TMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSD 459

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
            ++  +S+C  + ++  G  IHG  +K+ L   + + ++++ +Y+K      S  VF+ M
Sbjct: 460 IMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDM 519

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             K+ ++WN++IS Y ++G    ++S F  M   G + PD  + T+VL + S   ++  G
Sbjct: 520 PLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYG-LFPDSVSITSVLVSVSSVAVLRKG 578

Query: 609 TRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
             +   ++     IP++  L + ++D+  + G+L  A+ +  +  +Q     W  + + C
Sbjct: 579 KAVHGYLIRQR--IPSDLQLENALIDMYIKCGFLKYAQHIFQNM-LQTNLVTWNIMIAGC 635

Query: 668 AAHGN 672
            +HG+
Sbjct: 636 GSHGD 640



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 129/275 (46%), Gaps = 35/275 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   ++  Y +AL  +  + + +  KPD   +++ ++AC  L+N   G  +H  A+++G
Sbjct: 430 ISGFCQNRKYMEALEFYNSM-TVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSG 488

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L+    VA++++ +Y                               +K      +  VF 
Sbjct: 489 LEQDVFVASSLVDMY-------------------------------SKFNFPKMSGNVFS 517

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD-NYSFASVLSVCDAGLLEF 206
            MP ++L  +N++I+    NG  D+ I LF +M +  +  D     + ++SV    +L  
Sbjct: 518 DMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRK 577

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +H  + +      + + NALI MY  CG +  A  +F+       + +++N+M+ G 
Sbjct: 578 GKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNM--LQTNLVTWNIMIAGC 635

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            S G   +A+  F +M    + P ++TF+S++++C
Sbjct: 636 GSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSC 670


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 318/601 (52%), Gaps = 13/601 (2%)

Query: 141  YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            YA ++F      ++  +N  +T     G     I  F+ + +  +  D+ +   +LS   
Sbjct: 846  YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAV 905

Query: 200  DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             A  L+ G Q+H+LV KS F+ +V V N+L+ MY   G V  A K F  +     D IS+
Sbjct: 906  GADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP--ELDLISW 963

Query: 260  NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP------RVGYQVHAQ 313
            N M+   A      EA+  FRD+L   L+P + T  SV+ AC          +G QVH  
Sbjct: 964  NTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023

Query: 314  AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            A+K G    + VS A I +YS  GK+DEA  +     + D+ SWN ++  Y + N  R A
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083

Query: 374  ILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISA 430
            +  +  M  +GI  DE T  + + +SG    ++  + I A+    G   ++ VS+ ++  
Sbjct: 1084 LEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143

Query: 431  YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            Y K   +  A ++F  +S  + + W T+I+G++ NG     L  +  + +S ++PDEYT 
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203

Query: 491  SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            +  + + + +++L  GKQIH  V+K +      +G +++ +Y KCG +  + RVF  M  
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263

Query: 551  KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            +  + WNA++   AQHG   EA++ F+ MQ  G I+PD+ TF  VLSACSH+GL  +  +
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNG-IQPDKVTFIGVLSACSHSGLFSEAYK 1322

Query: 611  IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
             FD+M   YG  P  +H SC++D LGRAG + EAE VI S   +A +  + AL  AC   
Sbjct: 1323 YFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTK 1382

Query: 671  GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            G+    + +A  LL  +    S YVLLSNIYAA+  W++  + R ++K   V K PG SW
Sbjct: 1383 GDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSW 1442

Query: 731  I 731
            I
Sbjct: 1443 I 1443



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 237/571 (41%), Gaps = 77/571 (13%)

Query: 56   DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
            D  +L   L+A     +   G Q+HA  +++       V+N+++++Y             
Sbjct: 893  DSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMY------------- 939

Query: 116  SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              +K G V  A + F   P+ DL  +N MI+   +N  E   I 
Sbjct: 940  ------------------SKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 176  LFREMHKLDVRRDNYSFASVLSVCDAG----LLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
             FR++ +  ++ D ++ ASVL  C  G        G Q+H    K G      V  ALI 
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALID 1041

Query: 232  MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            +Y + G  +D  +     K Y  D  S+N +M G     +  +AL  F  M    +   E
Sbjct: 1042 LY-SKGGKMDEAEFLLHGK-YDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099

Query: 292  LTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            +T  + + A  C    + G Q+ A A+K GF     VS+  + MY  CG +  A  +F  
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGE 1159

Query: 349  LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
            +   D V+W TMIS Y +      A+  Y  M+  G++PDE+TF +L+ +S  +  +E  
Sbjct: 1160 ISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQG 1219

Query: 407  -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
              IHA V       +  V  +L+  Y K   ++ AY++F  M  R ++ WN ++ G   +
Sbjct: 1220 KQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQH 1279

Query: 466  GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
            G   + L  F  +  + ++PD+ T    LS+C+         + + Y             
Sbjct: 1280 GHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLF---SEAYKYF------------ 1324

Query: 526  NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            +AM   Y                I  +   ++ L+ A  + G  +EA +   +M      
Sbjct: 1325 DAMFKTYG---------------ITPEIEHYSCLVDALGRAGRIQEAENVIASMP----F 1365

Query: 586  KPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            K   + + A+L AC   G  +   R+ D ++
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLL 1396



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 133/593 (22%), Positives = 249/593 (41%), Gaps = 73/593 (12%)

Query: 19   ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
            ++LL+ ++ + ++S    +     LF +  S        +SL  +  A A+L+    G +
Sbjct: 576  KMLLRAHLKVPSISSRTSFACPFLLFCRFSSLSSSSSQWFSLLRSAIAMADLK---LGKR 632

Query: 79   LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
             HA  + +G     ++ N ++++Y     L S ++VF +  + D+ +W + L+A  +   
Sbjct: 633  AHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFAD 692

Query: 139  VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI-GLFREMHKLDVRRDNYSFASVLS 197
              Y                        EN  E   + GL RE     + R   +    L 
Sbjct: 693  SSY------------------------ENVLEGFRLFGLLREF-GFSITRLTLAPLLKLC 727

Query: 198  VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            +  +G ++    +H    K GF   + V  AL+ +Y   G V  A  +F++      D +
Sbjct: 728  LL-SGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER--DAV 784

Query: 258  SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC------PRVGYQVH 311
             +NVM+         +EAL  F     +   P       V+            R   QV 
Sbjct: 785  LWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVK 844

Query: 312  AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            A AMK                            +F   Q  +I +WN  ++ +       
Sbjct: 845  AYAMK----------------------------MFPFDQGSNIFAWNKKLTEFLHAGQIV 876

Query: 372  SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            +AI  +  +    I  D  T   +L++   +  +++ E IHA V  +     + VSN+L+
Sbjct: 877  AAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLM 936

Query: 429  SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            + Y+K   +  A + F N    ++I+WNT+I+ +  N   ++ +  F +LL   L+PD++
Sbjct: 937  NMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQF 996

Query: 489  TLSVALSSCARISSLRH---GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            TL+  L +C+      +   G Q+H Y +K  +I+   +  A+I LY+K G +D +  + 
Sbjct: 997  TLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLL 1056

Query: 546  NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
            +   + D  SWNA++  Y +  + ++A+  F  M ++G I  D+ T    + A
Sbjct: 1057 HGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMG-IPIDEITLATAIKA 1108



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 35/270 (12%)

Query: 33   RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            +S   + AL  F  +H    +  D  +L+T + A   L N   G Q+ AYA++ G     
Sbjct: 1076 KSNKSRKALEHFSLMHE-MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDL 1134

Query: 93   HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
             V++ +L +Y    D+ +   +F EI  PD  +WTT +S                     
Sbjct: 1135 WVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMIS--------------------- 1173

Query: 153  DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
                      G  ENG ED  + ++  M    V+ D Y+FA+++        LE G+Q+H
Sbjct: 1174 ----------GYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIH 1223

Query: 212  SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            + V K  +S    V  +L+ MY  CG+V DA +VF +    V   + +N M+ GLA  G 
Sbjct: 1224 ANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMD--VRKVVFWNAMLLGLAQHGH 1281

Query: 272  VEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            V+EAL  FR M    ++P ++TF+ V+SAC
Sbjct: 1282 VDEALNLFRTMQSNGIQPDKVTFIGVLSAC 1311


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 235/769 (30%), Positives = 379/769 (49%), Gaps = 57/769 (7%)

Query: 15   NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
            +T+++L+    I  A  + +    D  HLF  +  S  +    ++L+     C    + +
Sbjct: 719  DTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRS-VVSTTRHTLAPVFKMCLLSASPS 777

Query: 75   FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA-- 132
                LH YA++ GL+    VA  ++++Y     +   + +F  +   DV  W   + A  
Sbjct: 778  ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYV 837

Query: 133  -----------------------------------CTK-----MGHVDYACEVFDKMPD- 151
                                               C K          YA ++F    D 
Sbjct: 838  DTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDG 897

Query: 152  RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQ 209
             D+ V+N  ++   + G     +  F +M    V  D  +F  +L+V  AGL  LE G+Q
Sbjct: 898  SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVV-AGLNCLELGKQ 956

Query: 210  LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            +H +V +SG   +VSV N LI MY   G+V  A  VF +      D IS+N M+ G    
Sbjct: 957  IHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNE--VDLISWNTMISGCTLS 1014

Query: 270  GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSV 325
            G  E ++  F  +L  SL P + T  SV+ AC     GY    Q+HA AMK+G    + V
Sbjct: 1015 GLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFV 1074

Query: 326  SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            S A I +YS  GK++EA  +F      D+ SWN ++  Y        A+  Y+ MQ  G 
Sbjct: 1075 STALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGE 1134

Query: 386  RPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            R D+ T   +  A+ G + + +   IHA V   G   ++ V++ ++  Y K   ++ A +
Sbjct: 1135 RSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARR 1194

Query: 443  IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            +F  +   + + W T+I+G + NG     L  + ++ +S+++PDEYT +  + +C+ +++
Sbjct: 1195 VFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTA 1254

Query: 503  LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            L  G+QIH  ++K N      +  +++ +YAKCG+++ +  +F     +   SWNA+I  
Sbjct: 1255 LEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVG 1314

Query: 563  YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
             AQHG  KEA+  FK M+  G + PD+ TF  VLSACSH+GLV +    F SM  +YG  
Sbjct: 1315 LAQHGNAKEALQFFKYMKSRG-VMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIE 1373

Query: 623  PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
            P  +H SC++D L RAG ++EAE+VI+S   +A +  +  L +AC    +   G+ +A  
Sbjct: 1374 PEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEK 1433

Query: 683  LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LL  E    + YVLLSN+YAAA  WE  A+ R ++++  V K PG SW+
Sbjct: 1434 LLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWV 1482



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 174/677 (25%), Positives = 292/677 (43%), Gaps = 93/677 (13%)

Query: 94   VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD-- 151
            +A + LSL K A       R+ +   +PD +     ++   K G +  A ++FD  PD  
Sbjct: 667  IAASDLSLGKRAH-----ARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721

Query: 152  RDLPVYNAMITGCTENGYED-IGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ 209
            RDL  +NA+++    +  +   G  LFR + +  V    ++ A V  +C  +        
Sbjct: 722  RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781

Query: 210  LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            LH    K G    V V  AL+ +Y   G + +A  +F+     V D + +NVMM      
Sbjct: 782  LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMA--VRDVVLWNVMMKAYVDT 839

Query: 270  GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
                EA++ F +      RP ++T  ++     C +   ++        F+AY +     
Sbjct: 840  CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQ------FKAYAT----K 889

Query: 330  ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
            + MY   G               D++ WN  +S + QR     A+  +++M +  +  D 
Sbjct: 890  LFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDG 935

Query: 390  FTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
             TF  +L   A    +E+ + IH  V  +G+   + V N LI+ Y K   + +A  +F  
Sbjct: 936  LTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQ 995

Query: 447  MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
            M+  ++I+WNT+I+G  L+G     +  F  LL   L PD++T++  L +C   SSL  G
Sbjct: 996  MNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRAC---SSLEGG 1052

Query: 507  ----KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
                 QIH   +K  ++    +  A+I +Y+K G ++ +  +F      D  SWNA++  
Sbjct: 1053 YYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHG 1112

Query: 563  YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV--DDGTRIFDSMVNDYG 620
            Y   G+  +A+  +  MQ+ G  + DQ T   V +A +  GLV    G +I  ++V   G
Sbjct: 1113 YIVSGDFPKALRLYILMQESGE-RSDQITL--VNAAKAAGGLVGLKQGKQIH-AVVVKRG 1168

Query: 621  FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHG-------- 671
            F       S +LD+  + G ++ A RV +   I +  D  W  + S C  +G        
Sbjct: 1169 FNLDLFVTSGVLDMYLKCGEMESARRVFS--EIPSPDDVAWTTMISGCVENGQEEHALFT 1226

Query: 672  --NLRLGRI------------IAGLLLEREQDK--------------PSVYVLLSNIYAA 703
               +RL ++               LL   EQ +              P V   L ++YA 
Sbjct: 1227 YHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286

Query: 704  AGLWEEAANIRELLKRT 720
             G  E+A   R L KRT
Sbjct: 1287 CGNIEDA---RGLFKRT 1300


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 209/620 (33%), Positives = 311/620 (50%), Gaps = 79/620 (12%)

Query: 188 DNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           D+  FA +L  C    +G+    R++H+ + K+ FS  + + N L+  Y  CG   DA K
Sbjct: 18  DSSPFAKLLDSCVRSKSGI--DARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARK 75

Query: 245 VFEEAKGYVC-----------------------------DHISYNVMMDGLASVGRVEEA 275
           VF+                                    D  S+N M+ G A   R EEA
Sbjct: 76  VFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEA 135

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F DM       +E +F S +SAC       +G Q+HA   KS +     + +A + M
Sbjct: 136 LRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDM 195

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS CG +  A   F  +  ++IVSWN++I+ Y Q      A+  ++ M   G+ PDE T 
Sbjct: 196 YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITL 255

Query: 393 GSLL---ASSGFIEMVEMIHA--------------------------------FVFINGI 417
            S++   AS   I     IHA                                 VF    
Sbjct: 256 ASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP 315

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + N+    +++  YA+   +K A  +F NM  +N+++WN LI G+  NG   + ++ F  
Sbjct: 316 LRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLL 375

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITL 531
           L    + P  YT    L++CA ++ L+ G+Q H  +LK+         S + +GN++I +
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDM 435

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y KCG ++    VF  M+E+D +SWNA+I  YAQ+G G  A+  F+ M   G+ KPD  T
Sbjct: 436 YMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQ-KPDHVT 494

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
              VLSACSHAGLV++G R F SM  + G  P +DH +CM+DLLGRAG LDEA  +I + 
Sbjct: 495 MIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTM 554

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
            +Q  +  W +L +AC  HGN+ LG+ +A  L+E +      YVLLSN+YA  G W++  
Sbjct: 555 PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVV 614

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            +R+ +++ GVIKQPGCSWI
Sbjct: 615 RVRKQMRQRGVIKQPGCSWI 634



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 155/574 (27%), Positives = 268/574 (46%), Gaps = 51/574 (8%)

Query: 42  HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSL 101
           H FVQ         D    +  L +C   ++     ++HA  ++    +   + N ++  
Sbjct: 4   HGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDA 63

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMI 161
           Y         ++VF  +   + +S+   LS  TK G +D A  VF  MP+ D   +NAM+
Sbjct: 64  YGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMV 123

Query: 162 TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGF 219
           +G  ++   +  +  F +MH  D   + YSF S LS C AGL  L  G Q+H+L++KS +
Sbjct: 124 SGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSAC-AGLTDLNMGIQIHALISKSRY 182

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              V + +AL+ MY  CG V  A + F+     V + +S+N ++      G   +AL  F
Sbjct: 183 LLDVYMGSALVDMYSKCGVVACAQRAFDGMA--VRNIVSWNSLITCYEQNGPAGKALEVF 240

Query: 280 RDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSS 335
             M+   + P E+T  SV+SAC      R G Q+HA+ +K   +     + NA + MY+ 
Sbjct: 241 VMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAK 300

Query: 336 CGKIDEACMIFAR-------------------------------LQEKDIVSWNTMISTY 364
           C +++EA ++F R                               + EK++VSWN +I+ Y
Sbjct: 301 CRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGY 360

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---------MIHAFVFIN 415
            Q      A+  +L ++   I P  +TFG+LL +   +  ++         + H F F +
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQS 420

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  ++I V N+LI  Y K   ++    +F  M  R++++WN +I G+  NG+    L+ F
Sbjct: 421 GEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIF 480

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAK 534
            ++L+S  +PD  T+   LS+C+    +  G++  H    +  L         M+ L  +
Sbjct: 481 RKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGR 540

Query: 535 CGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
            G LD +  +   M ++ D + W +L++A   HG
Sbjct: 541 AGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 173/372 (46%), Gaps = 19/372 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL-RAGLKA 90
            ++G    AL +FV +   + ++PD  +L++ ++ACA+      G Q+HA  + R   + 
Sbjct: 228 EQNGPAGKALEVFVMM-MDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRN 286

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              + N ++ +Y   R +   + VF  +   +V S T+ +    +   V  A  +F  M 
Sbjct: 287 DLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMM 346

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           ++++  +NA+I G T+NG  +  + LF  + +  +   +Y+F ++L+ C +   L+ GRQ
Sbjct: 347 EKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQ 406

Query: 210 LHSLVTKSGF------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            H+ + K GF         + V N+LI MY  CG V D C VFE       D +S+N M+
Sbjct: 407 AHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVER--DVVSWNAMI 464

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGF 319
            G A  G    AL  FR MLV+  +P  +T + V+SAC    L        H+   + G 
Sbjct: 465 VGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGL 524

Query: 320 EAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMIS---TYAQRNLGRSAIL 375
                     + +    G +DEA  +I     + D V W ++++    +    LG+    
Sbjct: 525 APMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAE 584

Query: 376 AYLEMQSVGIRP 387
             +E+  +   P
Sbjct: 585 KLMEIDPLNSGP 596



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 50/256 (19%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SN  ++ ++  N  +A  +++G  ++A+ LF+ +     + P  Y+    L ACANL + 
Sbjct: 343 SNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLL-KRESIWPTHYTFGNLLNACANLADL 401

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q H   L+ G                           F   +  D++   + +   
Sbjct: 402 KLGRQAHTQILKHGF-------------------------WFQSGEESDIFVGNSLIDMY 436

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G V+  C VF++M +RD+  +NAMI G  +NGY    + +FR+M     + D+ +  
Sbjct: 437 MKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMI 496

Query: 194 SVLSVCD-AGLLEFGRQ-LHSLVTKSG-------FSCLVSVV---------NALI-TMYF 234
            VLS C  AGL+E GR+  HS+ T+ G       F+C+V ++         N LI TM  
Sbjct: 497 GVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPM 556

Query: 235 NCGNVV-----DACKV 245
              NVV      ACKV
Sbjct: 557 QPDNVVWGSLLAACKV 572



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 87/171 (50%), Gaps = 12/171 (7%)

Query: 471 GLQHFSELLMSEL-RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           G   F + L+ EL   D    +  L SC R  S    ++IH  ++K    S++ + N ++
Sbjct: 2   GRHGFVQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLV 61

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
             Y KCG  + + +VF+ M +++T S+NA++S   + G+  EA + FK+M +     PDQ
Sbjct: 62  DAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPE-----PDQ 116

Query: 590 ATFTAVLSACSHAGLVDDGTRIF------DSMVNDYGFIPAEDHLSCMLDL 634
            ++ A++S  +     ++  R F      D ++N+Y F  A    + + DL
Sbjct: 117 CSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDL 167


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 200/596 (33%), Positives = 309/596 (51%), Gaps = 74/596 (12%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--------KGYVC------ 254
           ++H+ + KS F+    + N LI +Y  CG V  A K+F+             +C      
Sbjct: 40  RVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSG 99

Query: 255 ---------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
                          D  S+N M+ G    GR +EAL+ F  M       +E +F S +S
Sbjct: 100 FLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALS 159

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC      ++G Q+H+   +S + +   + +A + MYS CG+++ A  +F  +  +  VS
Sbjct: 160 ACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS 219

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFV- 412
           WN++I+ Y Q      A+  ++EM   G+ PDE T  S++++   I  +   + IHA V 
Sbjct: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279

Query: 413 ----FINGII---------------------------TNIQVSNALISAYAKNERIKQAY 441
               F N +I                            ++    +++S YAK  ++K A 
Sbjct: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F NM  +++ITWN LI G   NG   + L  F  L    + P  YT    L++CA ++
Sbjct: 340 YMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLA 399

Query: 502 SLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            L+ G+Q H +VLK+         S + +GN++I +Y KCG ++   RVF  M+EKD +S
Sbjct: 400 DLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVS 459

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+I  YAQ+G G +A+  F  M + G   PD  T   VL ACSHAGL+D+G   F SM
Sbjct: 460 WNAMIVGYAQNGFGNKALEVFCKMLESGE-APDHVTMIGVLCACSHAGLLDEGRYYFRSM 518

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              +G +P +DH +CM+DLLGRAGYL+EA+ +I    +Q  +  W +L +AC  H N++L
Sbjct: 519 TAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQL 578

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G  +   LLE + +    YVLLSN+YA    W+    +R+L+++ GV+KQPGCSWI
Sbjct: 579 GEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWI 634



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 153/559 (27%), Positives = 270/559 (48%), Gaps = 51/559 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D    S  L  CA  R+A   +++HA  +++   +   + N ++ +Y     +   +++F
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             +   +++SW + + A TK G +D A  +F+KMP  D   +N+MI+G  ++G  D  + 
Sbjct: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            F +MH      + YSF S LS C AGL  L+ G Q+HSLV +S +   V + +AL+ MY
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSAC-AGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             CG V  A  VF+E    V   +S+N ++      G V+EAL  F +M+   + P E+T
Sbjct: 197 SKCGRVEYAQSVFDEMT--VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254

Query: 294 FVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMI---- 345
             SV+SAC      + G Q+HA+ +K   F     + NA + MY+ C +I+EA +I    
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314

Query: 346 ---------------------------FARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                                      F+ +  KD+++WN +I+   Q      A++ + 
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE---------MIHAFVFINGIITNIQVSNALIS 429
            ++   + P  +TFG+LL +   +  ++         + H F F  G  +++ V N+LI 
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   ++   ++F +M  ++ ++WN +I G+  NGF  + L+ F ++L S   PD  T
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494

Query: 490 LSVALSSCARISSLRHGK-QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NM 547
           +   L +C+    L  G+        ++ L+        M+ L  + G L+ +  +   M
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554

Query: 548 MIEKDTISWNALISAYAQH 566
            ++ D I W +L++A   H
Sbjct: 555 SMQPDAIVWGSLLAACKVH 573



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 173/372 (46%), Gaps = 19/372 (5%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LKA 90
            ++G   +AL +FV++     ++PD  +L++ ++ACA +     G Q+HA  ++    + 
Sbjct: 228 EQNGPVDEALKIFVEMIKC-GVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRN 286

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              + N +L +Y     +   + +F  +    V S T+ +S   K   V  A  +F  M 
Sbjct: 287 DLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMM 346

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
            +D+  +NA+I GCT+NG  +  + LFR + +  V   +Y+F ++L+ C +   L+ GRQ
Sbjct: 347 VKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQ 406

Query: 210 LHSLVTKSGF------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            HS V K GF         V V N+LI MY  CG+V + C+VF+      C  +S+N M+
Sbjct: 407 AHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDC--VSWNAMI 464

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGF 319
            G A  G   +AL  F  ML +   P  +T + V+ AC    L     Y   +   + G 
Sbjct: 465 VGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGL 524

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST-YAQRN--LGRSAIL 375
                     + +    G ++EA  +   +  + D + W ++++     RN  LG   + 
Sbjct: 525 MPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVK 584

Query: 376 AYLEMQSVGIRP 387
             LE+      P
Sbjct: 585 KLLEVDPENSGP 596



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 11/155 (7%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D    S  L+ CAR  S R   ++H  ++K+   S+  + N +I +Y KCG +D + ++F
Sbjct: 18  DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + M+E++  SWN++I A+ + G   +AV  F+ M  V     DQ ++ +++S     G  
Sbjct: 78  DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQV-----DQCSWNSMISGFEQHGRF 132

Query: 606 DDGTRIFDSM------VNDYGFIPAEDHLSCMLDL 634
           D+    F  M      VN+Y F  A    + + DL
Sbjct: 133 DEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDL 167


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 334/616 (54%), Gaps = 19/616 (3%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DV 185
           T  ++    +G V  +   FD++P +D+  +N+MI+    NG+    IG F ++  + ++
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R D Y+F  VL  C  G L  GR++H    K GF   V V  +LI MY   G    A  +
Sbjct: 215 RPDFYTFPPVLKAC--GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 272

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F++      D  S+N M+ GL   G   +AL    +M +  ++ + +T VS++   +CP+
Sbjct: 273 FDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP--VCPQ 328

Query: 306 VG-----YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           +G       +H   +K G E    VSNA I MY+  G +++A   F ++   D+VSWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING- 416
           I+ Y Q +   +A   +++MQ  G +PD  T     S++A S   +    +H F+   G 
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++ ++ + NA++  YAK   +  A+++F  +  +++I+WNTLI G+  NG   + ++ + 
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508

Query: 477 ELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            +    E+ P++ T    L + A + +L+ G +IHG V+K NL   + +   +I +Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 568

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L  ++ +F  + ++ +++WNA+IS +  HG  ++ +  F  M D G +KPD  TF ++
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG-VKPDHVTFVSL 627

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSH+G V++G   F  ++ +YG  P+  H  CM+DLLGRAGYL+ A   I    +Q 
Sbjct: 628 LSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQP 686

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            +  W AL  AC  HGN+ LG+  +  L E +      YVLLSNIYA  G WE    +R 
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746

Query: 716 LLKRTGVIKQPGCSWI 731
           L +  G+ K PG S I
Sbjct: 747 LARERGLKKTPGWSTI 762



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 160/538 (29%), Positives = 269/538 (50%), Gaps = 25/538 (4%)

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           F + LH+L+  +G    + +   L+ +Y N G+V  +   F++      D  ++N M+  
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK--DVYAWNSMISA 191

Query: 266 LASVGRVEEALIRFRD-MLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
               G   EA+  F   +LV+ +RP   TF  V+ AC     G ++H  A K GF+    
Sbjct: 192 YVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVF 251

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V+ + I MYS  G    A  +F  +  +D+ SWN MIS   Q      A+    EM+  G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I+ +  T  S+L      G I    +IH +V  +G+  ++ VSNALI+ YAK   ++ A 
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           + F  M   ++++WN++I  +  N  PV     F ++ ++  +PD  TL    S  A+  
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 502 SLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             ++ + +HG++++   L+  + +GNA++ +YAK G LD + +VF ++  KD ISWN LI
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLI 491

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + YAQ+G   EA+  +K M++   I P+Q T+ ++L A +H G +  G +I   +     
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV----- 546

Query: 621 FIPAEDHL-----SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            I    HL     +C++D+ G+ G L +A  +   Q  Q  S  W A+ S    HG+   
Sbjct: 547 -IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF-YQVPQESSVTWNAIISCHGIHGHAEK 604

Query: 676 GRIIAGLLLEREQDKPS--VYVLLSNIYAAAGLWEEAANIRELLKRTGV---IKQPGC 728
              + G +L+ E  KP    +V L +  + +G  EE      L++  G+   +K  GC
Sbjct: 605 TLKLFGEMLD-EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 247/544 (45%), Gaps = 46/544 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +GH+ +A+  F Q+    +++PD Y+    L AC  L +   G ++H +A + G +    
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 251

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VA +++ +Y                               ++ G    A  +FD MP RD
Sbjct: 252 VAASLIHMY-------------------------------SRFGFTGIARSLFDDMPFRD 280

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
           +  +NAMI+G  +NG     + +  EM    ++ +  +  S+L VC   G +     +H 
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            V K G    + V NALI MY   GN+ DA K F++   ++ D +S+N ++         
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAAYEQNDDP 398

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV-SNA 328
             A   F  M +   +P  LT VS+ S     R       VH   M+ G+     V  NA
Sbjct: 399 VTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNA 458

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRP 387
            + MY+  G +D A  +F  +  KD++SWNT+I+ YAQ  L   AI  Y  M+    I P
Sbjct: 459 VVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++ T+ S+L   A  G ++    IH  V    +  ++ V+  LI  Y K  R+  A  +F
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + +   + +TWN +I+   ++G   + L+ F E+L   ++PD  T    LS+C+    + 
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAY 563
            GK     + +  +   +     M+ L  + G L+ +   + +M ++ D   W AL+ A 
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGAC 698

Query: 564 AQHG 567
             HG
Sbjct: 699 RIHG 702



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 204/452 (45%), Gaps = 44/452 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L ++G+   AL +  ++     +K +  ++ + L  C  L + +    +H Y +
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLE-GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+    V+N ++++Y    +L   ++ F ++   DV SW + ++A  +         
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ--------- 394

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
                   D PV        T +G+       F +M     + D  +  S+ S V  +  
Sbjct: 395 -------NDDPV--------TAHGF-------FVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 204 LEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  R +H  + + G+    V + NA++ MY   G +  A KVFE     V D IS+N +
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIP--VKDVISWNTL 490

Query: 263 MDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           + G A  G   EA+  ++ M     + P++ T+VS++ A       + G ++H + +K+ 
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTN 550

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V+   I +Y  CG++ +A  +F ++ ++  V+WN +IS +         +  + 
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 610

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           EM   G++PD  TF SLL++   SGF+E  +     +   GI  +++    ++    +  
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG 670

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
            ++ AY    +M  + +   W  L+    ++G
Sbjct: 671 YLEMAYDFIKDMPLQPDASIWGALLGACRIHG 702



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +G + +E  F  L  SS      + +HA + + G + +I +S  L++ YA    +  +  
Sbjct: 113 LGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRC 172

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARIS 501
            F  +  +++  WN++I+ ++ NG   + +  F +LL+ SE+RPD YT    L +C    
Sbjct: 173 TFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG--- 229

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  G++IH +  K      + +  ++I +Y++ G    +  +F+ M  +D  SWNA+IS
Sbjct: 230 TLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
              Q+G   +A+     M+  G IK +  T  ++L  C   G
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEG-IKMNFVTVVSILPVCPQLG 330



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/190 (17%), Positives = 84/190 (44%), Gaps = 5/190 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   +++G   +A+ ++  +    ++ P+  +  + L A A++     G ++H
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH 543

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++  L     VA  ++ +Y     LV    +F ++      +W   +S     GH +
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              ++F +M D     D   + ++++ C+ +G+ + G   FR M +  ++     +  ++
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV 663

Query: 197 SVCD-AGLLE 205
            +   AG LE
Sbjct: 664 DLLGRAGYLE 673


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 218/695 (31%), Positives = 344/695 (49%), Gaps = 48/695 (6%)

Query: 47  IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNAR 106
           IH+   L P + S+   L  C +    + G Q HA  L  G+     +   +L +Y    
Sbjct: 39  IHNDDSLAPQLVSI---LQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCG 95

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
             +  K +F +++      W   +   T MG  D+A   + KM                 
Sbjct: 96  AFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM----------------- 138

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVS 224
                +G G            D Y+F  V+  C  GL  +  GR +H  +   GF   V 
Sbjct: 139 -----LGCGTLP---------DKYTFPYVIKAC-GGLNSVALGRVVHDKIQFMGFELDVF 183

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V ++LI  Y   G + DA  +F+       D + +NVM++G    G  + A   F +M  
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241

Query: 285 ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN--AAITMYSSCGKI 339
               P+ +TF  V+S C   +    G Q+H   + SG E  + V+N  A I +Y  C  +
Sbjct: 242 TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDV 301

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-AS 398
           + A  IF +    DIV    MIS Y    +  +A+  +  +    +R +  T  S+L A 
Sbjct: 302 EMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPAC 361

Query: 399 SGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           +G   + + + +H  +  NG   +  V +A++  YAK  R+  A+Q F  +S ++ + WN
Sbjct: 362 AGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWN 421

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++I     NG P + +  F ++ M+  + D  ++S ALS+CA + +L +GK+IH ++++ 
Sbjct: 422 SMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG 481

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
              S +   +A+I +Y+KCG+LD + RVF+ M EK+ +SWN++I+AY  HG  K++++ F
Sbjct: 482 AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLF 541

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M   G I+PD  TF A++SAC HAG VD+G   F  M  + G +   +H +CM+DL G
Sbjct: 542 HGMLGDG-IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 600

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           RAG L+EA  +INS      +  W  L  AC  HGN+ L  + +  L + +      YVL
Sbjct: 601 RAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVL 660

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LSN++A AG WE    IR L+K  GV K PGCSWI
Sbjct: 661 LSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWI 695



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/586 (24%), Positives = 255/586 (43%), Gaps = 52/586 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +  G +  AL  + ++     L PD Y+    + AC  L + A G  +H    
Sbjct: 116 NWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    V ++++  Y     +   + +F  + + D   W   L+             
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLN------------- 221

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-L 203
                             G  +NG  D   G+F EM + +   ++ +FA VLSVC +  +
Sbjct: 222 ------------------GYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVN--ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           + FG QLH LV  SG      V N  ALI +YF C +V  A K+F++      D +    
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRT--PVDIVVCTA 321

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           M+ G    G    AL  FR +L   +R + +T  SV+ AC       +G ++H   +K+G
Sbjct: 322 MISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG 381

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V +A + MY+ CG++D A   F  + +KD V WN+MI++ +Q      AI  + 
Sbjct: 382 HGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFR 441

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +M   G + D  +  + L++   +  +   + IHAF+      +++   +ALI  Y+K  
Sbjct: 442 QMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCG 501

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +  A ++F  M  +N ++WN++I  +  +G     L  F  +L   ++PD  T    +S
Sbjct: 502 NLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 561

Query: 496 SCARISSLRHGKQIHGYVLKN---NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEK 551
           +C     +  G  IH +        ++++M     M+ L+ + G L+ +  + N M    
Sbjct: 562 ACGHAGQVDEG--IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 619

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           D   W  L+ A   HG  + A    + + D   + P  + +  +LS
Sbjct: 620 DAGVWGTLLGACRLHGNVELAEVASRNLFD---LDPQNSGYYVLLS 662


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 320/601 (53%), Gaps = 12/601 (1%)

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           D A +VFD+MP R+   + ++I    +NG     +GLF  M +     D ++  S +  C
Sbjct: 103 DSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRAC 162

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            + G +  GRQ+H+   KS     + V NAL+TMY   G V D   +FE  K    D IS
Sbjct: 163 TELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDK--DLIS 220

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           +  ++ G A  G   EAL  FR M+V  S  P+E  F S   AC        G Q+H  +
Sbjct: 221 WGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLS 280

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K   +    V  +   MY+    +D A + F R++  D+VSWN++++ Y+   L   A+
Sbjct: 281 IKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEAL 340

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
           + + EM+  G+RPD  T   LL +    + +    +IH+++   G+  ++ V N+L+S Y
Sbjct: 341 VLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMY 400

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A+   +  A  +FH +  ++++TWN+++     +  P + L+ FS L  SE   D  +L+
Sbjct: 401 ARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLN 460

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
             LS+ A +      KQ+H Y  K  L+    L N +I  YAKCG LD ++R+F +M   
Sbjct: 461 NVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNN 520

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D  SW++LI  YAQ G  KEA+  F  M+ +G I+P+  TF  VL+ACS  G V++G  
Sbjct: 521 RDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLG-IRPNHVTFIGVLTACSRVGFVNEGCY 579

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            +  M  +YG +P  +H SC++DLL RAG L EA   I+    +     W  L +A   H
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            ++ +G+  A  +L  +    + YVLL NIYAA+G W E A +++ ++ +GV K PG SW
Sbjct: 640 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 699

Query: 731 I 731
           +
Sbjct: 700 V 700



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/554 (25%), Positives = 262/554 (47%), Gaps = 48/554 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   DAL LF  +  S     D ++L + + AC  L +   G Q+HA+AL++   +  
Sbjct: 129 QNGRAGDALGLFSSMLRS-GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDL 187

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y                               +K G VD    +F+++ D+
Sbjct: 188 IVQNALVTMY-------------------------------SKNGLVDDGFMLFERIKDK 216

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN-YSFASVLSVCDA-GLLEFGRQL 210
           DL  + ++I G  + G+E   + +FR+M        N + F S    C A G  E+G Q+
Sbjct: 217 DLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQI 276

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  K      + V  +L  MY    N+  A   F   +    D +S+N +++  +  G
Sbjct: 277 HGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEG 334

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSN 327
            + EAL+ F +M  + LRP  +T   ++ AC+     Y    +H+  +K G +   SV N
Sbjct: 335 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 394

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + ++MY+ C  +  A  +F  ++++D+V+WN++++  AQ N     +  +  +       
Sbjct: 395 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 454

Query: 388 DEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  +  ++L++S   G+ EMV+ +HA+ F  G++ +  +SN LI  YAK   +  A ++F
Sbjct: 455 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 514

Query: 445 HNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
             M + R++ +W++LI G+   G+  + L  FS +    +RP+  T    L++C+R+  +
Sbjct: 515 EIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFV 574

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
             G   +  +     ++      + ++ L A+ G L  +    + M  E D I W  L++
Sbjct: 575 NEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 634

Query: 562 AYAQHGE---GKEA 572
           A   H +   GK A
Sbjct: 635 ASKMHNDMEMGKRA 648



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 171/352 (48%), Gaps = 7/352 (1%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           T + N  ITMY  C   D A  +F  +  ++ VSW ++I+ + Q      A+  +  M  
Sbjct: 86  TVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLR 145

Query: 383 VGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G   D+F  GS + +    G +     +HA    +   +++ V NAL++ Y+KN  +  
Sbjct: 146 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDD 205

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCA 498
            + +F  +  +++I+W ++I GF   GF ++ LQ F ++++     P+E+    A  +C 
Sbjct: 206 GFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACG 265

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + S  +G+QIHG  +K  L   + +G ++  +YA+  +LD +   F  +   D +SWN+
Sbjct: 266 AVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNS 325

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +++AY+  G   EA+  F  M+D G ++PD  T   +L AC     +  G R+  S +  
Sbjct: 326 IVNAYSVEGLLSEALVLFSEMRDSG-LRPDGITVRGLLCACVGRDALYHG-RLIHSYLVK 383

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            G        + +L +  R   L  A  V +    Q     W ++ +ACA H
Sbjct: 384 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVV-TWNSILTACAQH 434



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 205/450 (45%), Gaps = 59/450 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  ++ G   +AL +F ++       P+ +   +   AC  + +  +G Q+H  +++  
Sbjct: 225 IAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 284

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L    +V  ++  +Y   ++L S +  F  I+ PD+ SW + ++A +  G +  A  +F 
Sbjct: 285 LDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 344

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLL 204
           +M D  L                               R D  +   +L  C   DA  L
Sbjct: 345 EMRDSGL-------------------------------RPDGITVRGLLCACVGRDA--L 371

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR +HS + K G    VSV N+L++MY  C ++  A  VF E K    D +++N ++ 
Sbjct: 372 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ--DVVTWNSILT 429

Query: 265 GLASVGRVEEALIRFRDMLVASLRPS--ELTFVSVMSACLCPRVGY-----QVHAQAMKS 317
             A     EE L  F   L+    PS   ++  +V+SA     +GY     QVHA A K+
Sbjct: 430 ACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKA 485

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILA 376
           G      +SN  I  Y+ CG +D+A  +F  +   +D+ SW+++I  YAQ    + A+  
Sbjct: 486 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDL 545

Query: 377 YLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           +  M+S+GIRP+  TF G L A S  GF+   E  + +  +    GI+   +  + ++  
Sbjct: 546 FSRMRSLGIRPNHVTFIGVLTACSRVGFVN--EGCYYYSIMEPEYGIVPTREHCSCIVDL 603

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLI 459
            A+  ++ +A      M    +II W TL+
Sbjct: 604 LARAGKLTEAANFIDQMPFEPDIIMWKTLL 633



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 153/345 (44%), Gaps = 43/345 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S  G   +AL LF ++  S  L+PD  ++   L AC        G  +H+Y ++ GL   
Sbjct: 331 SVEGLLSEALVLFSEMRDS-GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGD 389

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N++LS+Y    DL S   VF EI++ DV +W + L+AC +  H           P+
Sbjct: 390 VSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH-----------PE 438

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQL 210
             L                     LF  ++K +   D  S  +VLS   + G  E  +Q+
Sbjct: 439 EVLK--------------------LFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 478

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+   K+G      + N LI  Y  CG++ DA ++F E  G   D  S++ ++ G A  G
Sbjct: 479 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFG 537

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG------YQVHAQAMKSGFEAYTS 324
             +EAL  F  M    +RP+ +TF+ V++A  C RVG      Y       + G      
Sbjct: 538 YAKEALDLFSRMRSLGIRPNHVTFIGVLTA--CSRVGFVNEGCYYYSIMEPEYGIVPTRE 595

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
             +  + + +  GK+ EA     ++  E DI+ W T+++     N
Sbjct: 596 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHN 640



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 100/192 (52%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N  + N LI+ Y +      A Q+F  M  RN ++W ++I   + NG     L  FS +L
Sbjct: 85  NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            S    D++ L  A+ +C  +  +  G+Q+H + LK+   S + + NA++T+Y+K G +D
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               +F  + +KD ISW ++I+ +AQ G   EA+  F+ M   G   P++  F +   AC
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRAC 264

Query: 600 SHAGLVDDGTRI 611
              G  + G +I
Sbjct: 265 GAVGSWEYGEQI 276


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 221/706 (31%), Positives = 362/706 (51%), Gaps = 56/706 (7%)

Query: 42  HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSL 101
           +L+ + +++ + +    SL   L ACA+  N A   +LH   +RA L + P VA  ++  
Sbjct: 3   YLYFRPNTTSRARACRDSLLAHLDACASRANLA---ELHGRLVRAHLGSDPCVAGRLV-- 57

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMI 161
                                     T L++      + YA +VFD+M      V+N MI
Sbjct: 58  --------------------------TLLASPVSRHDMPYARKVFDRMAQPTAIVWNCMI 91

Query: 162 TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQ----LHSLVTKS 217
            G          + LFR M +  V  DNY+ A+V     A     GR     +H+LV + 
Sbjct: 92  RGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRI 151

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF+  + V++ LI  Y    +V DA KVFEE   +  D +S+ +M+   A  G+ +  L 
Sbjct: 152 GFASDLFVMSGLINFYGASKSVEDARKVFEEM--HERDVVSWTLMISAFAQCGQWDNVLR 209

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
              +M     +P+++T +S++SAC   R    G  V+A+  + G EA   + NA I MY 
Sbjct: 210 SLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRNALIGMYV 269

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG + +A   F  +  ++  SWNT+I  + Q    + A+  + EM S G+ PD  T  S
Sbjct: 270 KCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIPDVITLVS 329

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   A  G ++    +H ++  + I  +I + N+LI+ YAK   +  A  IF NM+ R+
Sbjct: 330 VLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRD 389

Query: 452 IITWNTLINGFLLNGFPVQGLQH------FSELLMSELRPDEYTLSVALSSCARISSLRH 505
           I++W  ++ G+      V+GLQ       F ++ + ++   E  L   LS+C+++ +L  
Sbjct: 390 IVSWTAMVCGY------VKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDK 443

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G++IH Y+ + ++ + M L +A++ +YAKCG +D +  +F+ M  K T++WNA+I   A 
Sbjct: 444 GREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLAS 503

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G+GKEAV+ F+ +  +   KPD  T   VL AC+H G+VD+G   F+ M+   G +P  
Sbjct: 504 QGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLMLT-LGIVPDN 562

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H  C++DLLGRAG LDEA   I    IQ     W +L +AC  H  + LG+II   +++
Sbjct: 563 EHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHIID 622

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +    +VL+SN++A  G W++   +R ++    V K PG S I
Sbjct: 623 LAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSI 668



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 241/545 (44%), Gaps = 56/545 (10%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLST---TLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           DAL LF  +  S  + PD Y+++    + AA A+ +  A G+ +HA   R G  +   V 
Sbjct: 102 DALELFRAMRRS-GVSPDNYTMAAVAQSSAAFASWKGRATGDAVHALVQRIGFASDLFVM 160

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           + +++ Y  ++ +   ++VF E+   DV SWT  +SA  + G  D      D        
Sbjct: 161 SGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDNVLRSLD-------- 212

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC------DAGLLEFGRQ 209
                                  EM     + +  +  S+LS C      D GL  + R 
Sbjct: 213 -----------------------EMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYAR- 248

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
               V + G    V + NALI MY  CG + DA K F+     + +  S+N ++DG    
Sbjct: 249 ----VDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMP--IRNTKSWNTLIDGFVQN 302

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMS--ACLCP-RVGYQVHAQAMKSGFEAYTSVS 326
           G+ +EAL  F +ML   + P  +T VSV+S  A L   + G  +H             + 
Sbjct: 303 GKHKEALTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQ 362

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N+ I MY+ CG +  A +IF  +  +DIVSW  M+  Y +    R+A   + +M+   + 
Sbjct: 363 NSLINMYAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVM 422

Query: 387 PDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
             E    SLL++    G ++    IH+++    + T++ + +AL+  YAK   I  A +I
Sbjct: 423 ASEMALVSLLSACSQLGALDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEI 482

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISS 502
           F  M  +  + WN +I G    G   + +  F +LL + + +PD  TL V L +C  +  
Sbjct: 483 FSRMRHKQTLAWNAMIGGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGM 542

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
           +  G      +L   ++        ++ L  + G LD +      M I+ + + W +L++
Sbjct: 543 VDEGLHYFNLMLTLGIVPDNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLA 602

Query: 562 AYAQH 566
           A   H
Sbjct: 603 ACRVH 607



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 71/378 (18%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++G +++AL +F ++ S   + PD+ +L + L+  A L +   G  LH Y  
Sbjct: 293 NTLIDGFVQNGKHKEALTMFEEMLSDGVI-PDVITLVSVLSTYAQLGDLQQGRYLHNYIK 351

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              +     + N+++++Y    D+ + + +F  +   D+ SWT                 
Sbjct: 352 DHEIHCDIILQNSLINMYAKCGDMAAAEIIFENMARRDIVSWT----------------- 394

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                         AM+ G  +         LF +M   DV     +  S+LS C   G 
Sbjct: 395 --------------AMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGA 440

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ GR++HS + +      + + +AL+ MY  CG +  A ++F   +      +++N M+
Sbjct: 441 LDKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHK--QTLAWNAMI 498

Query: 264 DGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
            GLAS G+ +EA+  F  +L +   +P  +T   V+ AC                     
Sbjct: 499 GGLASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCAC--------------------- 537

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEM 380
                      +  G +DE    F  +    IV  N          LGR+ +L  AY  +
Sbjct: 538 -----------THVGMVDEGLHYFNLMLTLGIVPDNEHYGCIVDL-LGRAGLLDEAYNFI 585

Query: 381 QSVGIRPDEFTFGSLLAS 398
           Q + I+P+   +GSLLA+
Sbjct: 586 QKMPIQPNPVIWGSLLAA 603


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 337/619 (54%), Gaps = 18/619 (2%)

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
           T L+A  ++G    A  + D+MP R+   +N +I   +  G   + +       +  V  
Sbjct: 48  TLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDV 107

Query: 188 DNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D +S+A+ L+ C  AG L  GR +H+L    G S  V V N+L++MY  CG + +A +VF
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF 167

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---- 302
           + A+    D +S+N ++ G    G  EE +  F  M    +  +     SV+  C     
Sbjct: 168 DVAEER--DDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGD 225

Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
               +   VH   +K+G ++   + +A I MY+  G + EA  +F  +QE ++V +NTMI
Sbjct: 226 GTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMI 285

Query: 362 STYAQ------RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFV 412
           + + +      + +   A+  Y E+QS G++P EFTF S+L +   +G++E  + IH  V
Sbjct: 286 AGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
                  +  + +ALI  Y  +  ++  ++ F +    +I+TW  +++G + N    + L
Sbjct: 346 IKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKAL 405

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F E L + L+PD +T+S  +++CA ++  R G+QI  +  K+       +GN+ + +Y
Sbjct: 406 SLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMY 465

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           A+ GD+D + R F  M   D +SW+A+IS +AQHG  ++A+  F  M D  ++ P++ TF
Sbjct: 466 ARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVD-AKVVPNEITF 524

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             VL+ACSH GLVD+G R +++M  DYG  P   H +C++DLLGRAG L +AE  I++  
Sbjct: 525 LGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGI 584

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
             A    W +L ++C  H +L  G+++A  ++E E    + YV+L N+Y  AG    A+ 
Sbjct: 585 FHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASK 644

Query: 713 IRELLKRTGVIKQPGCSWI 731
            R+L+K+ GV K+PG SWI
Sbjct: 645 TRDLMKQRGVKKEPGLSWI 663



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/528 (23%), Positives = 237/528 (44%), Gaps = 50/528 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D +S +  LAAC+   +   G  +HA A+  GL +   V+N+++S+Y             
Sbjct: 108 DRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMY------------- 154

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                          S C +MG    A  VFD   +RD   +N++++G    G  +  + 
Sbjct: 155 ---------------SKCGEMGE---ARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA---GLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +F  M +  +  ++++  SV+  C     G ++    +H  V K+G    V +V+A+I M
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDM 256

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV------EEALIRFRDMLVAS 286
           Y   G +V+A  +F   +    + + +N M+ G      V       EAL  + ++    
Sbjct: 257 YAKKGALVEAAALFRSVQEP--NVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314

Query: 287 LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           ++P+E TF SV+ AC        G Q+H Q +K  F+    + +A I +Y + G +++  
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
             F    + DIV+W  M+S   Q  L   A+  + E    G++PD FT  S++   AS  
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
                E I  F   +G      + N+ +  YA++  +  A + F  M   ++++W+ +I+
Sbjct: 435 VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVIS 494

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLI 519
               +G     L  F E++ +++ P+E T    L++C+    +  G + +  + K+  L 
Sbjct: 495 CHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLS 554

Query: 520 SKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
             +     ++ L  + G L D    + N +   D + W +L+++   H
Sbjct: 555 PTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIH 602



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 177/354 (50%), Gaps = 18/354 (5%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  +  Y   G    A  +   +  ++ VS+N +I  Y++  L   ++      +  G+ 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVD 106

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D F++ + L   + +G +     +HA   ++G+ + + VSN+L+S Y+K   + +A ++
Sbjct: 107 VDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRV 166

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI--S 501
           F     R+ ++WN+L++G++  G   + ++ F+ +    +  + + L   +  C+     
Sbjct: 167 FDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDG 226

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++   + +HG V+K  L S + L +AMI +YAK G L  +  +F  + E + + +N +I+
Sbjct: 227 TMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIA 286

Query: 562 AYAQHGE--GK----EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            + +     GK    EA++ +  +Q  G ++P + TF++VL AC+ AG ++ G +I   +
Sbjct: 287 GFCRTETVIGKEVASEALTLYSEVQSRG-MQPTEFTFSSVLRACNLAGYLEFGKQIHGQV 345

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSAC 667
           +  Y F   +   S ++DL   +G +++  R   S     + D   W A+ S C
Sbjct: 346 IK-YTFQEDDFIGSALIDLYFNSGCMEDGFRCFRS---SPKHDIVTWTAMVSGC 395



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 150/353 (42%), Gaps = 57/353 (16%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL L+ ++ S   ++P  ++ S+ L AC       FG Q+H   ++   +    + + +
Sbjct: 302 EALTLYSEVQS-RGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSAL 360

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + LY N+  +    R F      D+ +WT                               
Sbjct: 361 IDLYFNSGCMEDGFRCFRSSPKHDIVTWTA------------------------------ 390

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
            M++GC +N   +  + LF E     ++ D ++ +SV++ C +  +   G Q+    TKS
Sbjct: 391 -MVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKS 449

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF     + N+ + MY   G+V  A + F+E + +  D +S++ ++   A  G   +AL 
Sbjct: 450 GFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESH--DVVSWSAVISCHAQHGCARDALH 507

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN---------- 327
            F +M+ A + P+E+TF+ V++AC         H   +  G   Y +++           
Sbjct: 508 FFDEMVDAKVVPNEITFLGVLTAC--------SHGGLVDEGLRYYETMNKDYGLSPTIKH 559

Query: 328 --AAITMYSSCGKI-DEACMIFARLQEKDIVSWNTMI-STYAQRNLGRSAILA 376
               + +    G++ D    I   +   D V W +++ S    R+L R  ++A
Sbjct: 560 CTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVA 612



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 15/178 (8%)

Query: 37  YQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           ++ AL LF   H S    LKPD++++S+ + ACA+L  A  G Q+  +A ++G   +  +
Sbjct: 401 HEKALSLF---HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVM 457

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD-RD 153
            N+ + +Y  + D+ +  R F E+++ DV SW+  +S   + G    A   FD+M D + 
Sbjct: 458 GNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKV 517

Query: 154 LP---VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR 208
           +P    +  ++T C+  G  D G+  +  M+K      +Y  +  +  C   +   GR
Sbjct: 518 VPNEITFLGVLTACSHGGLVDEGLRYYETMNK------DYGLSPTIKHCTCVVDLLGR 569


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 225/673 (33%), Positives = 342/673 (50%), Gaps = 52/673 (7%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           +C N+  A    QLHA  L  G      +   +++LY    DL      F  IQ  +++S
Sbjct: 60  SCTNINVA---KQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFS 116

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD- 184
           W + +SA  + G                               Y D  +    E+  L  
Sbjct: 117 WNSMVSAYVRRGR------------------------------YRD-SMDCVTELLSLSG 145

Query: 185 VRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           VR D Y+F  VL  C +  L  G ++H  V K GF   V V  +LI +Y   G V  A K
Sbjct: 146 VRPDFYTFPPVLKACLS--LADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHK 203

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VF +    V D  S+N M+ G    G V EAL     M    ++   +T  S++  C   
Sbjct: 204 VFVDMP--VRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQS 261

Query: 305 RV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                G  VH   +K G E+   VSNA I MYS  G++ +A  +F  ++ +D+VSWN++I
Sbjct: 262 NDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSII 321

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVF-INGI 417
           + Y Q +   +A+  + EM  VG+RPD  T  SL +  G +    +   +H FV     +
Sbjct: 322 AAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWL 381

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             +I + NAL++ YAK   I  A  +F  +  R++I+WNTLI G+  NG   + +  ++ 
Sbjct: 382 EVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYN- 440

Query: 478 LLMSELR---PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
            +M E R   P++ T    L + + + +L+ G +IHG ++KN L   + +   +I +Y K
Sbjct: 441 -MMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGK 499

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG L+ ++ +F  + ++ ++ WNA+IS+   HG G++A+  FK M+  G +K D  TF +
Sbjct: 500 CGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADG-VKADHITFVS 558

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           +LSACSH+GLVD+    FD+M  +Y   P   H  CM+DL GRAGYL++A  ++++  IQ
Sbjct: 559 LLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQ 618

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
           A +  W  L +AC  HGN  LG   +  LLE + +    YVLLSNIYA  G WE A  +R
Sbjct: 619 ADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVR 678

Query: 715 ELLKRTGVIKQPG 727
            L +  G+ K PG
Sbjct: 679 SLARDRGLRKTPG 691



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 254/549 (46%), Gaps = 47/549 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G Y+D++    ++ S   ++PD Y+    L AC +L   A G ++H + L+ G +   
Sbjct: 126 RRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSL---ADGEKMHCWVLKMGFEHDV 182

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
           +VA +++ LY     +    +VF ++   DV SW   +S   + G+V  A  V D+M   
Sbjct: 183 YVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMK-- 240

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                       TE                 +V+ D  + +S+L +C  +  +  G  +H
Sbjct: 241 ------------TE-----------------EVKMDTVTVSSMLPICAQSNDVVGGVLVH 271

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
             V K G    V V NALI MY   G + DA +VF+  +  V D +S+N ++        
Sbjct: 272 LYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGME--VRDLVSWNSIIAAYEQNDD 329

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMS---ACLCPRVGYQVHAQAMKSGF-EAYTSVSN 327
              AL  F++ML   +RP  LT VS+ S        R+G  VH   ++  + E    + N
Sbjct: 330 PVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGN 389

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIR 386
           A + MY+  G ID A  +F +L  +D++SWNT+I+ YAQ  L   AI AY  M+    I 
Sbjct: 390 ALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIV 449

Query: 387 PDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P++ T+ S+L +    G ++    IH  +  N +  ++ V+  LI  Y K  R++ A  +
Sbjct: 450 PNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSL 509

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ +     + WN +I+   ++G   + LQ F ++    ++ D  T    LS+C+    +
Sbjct: 510 FYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLV 569

Query: 504 RHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALIS 561
              +     + K   I   +     M+ L+ + G L+ +   V NM I+ D   W  L++
Sbjct: 570 DEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLA 629

Query: 562 AYAQHGEGK 570
           A   HG  +
Sbjct: 630 ACRIHGNAE 638



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 169/305 (55%), Gaps = 2/305 (0%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           F  V  +C    V  Q+HA  +  G      +    +T+Y++ G +  +   F  +Q K+
Sbjct: 54  FNLVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEFTFGSLLASSGFIEMVEMIHAFV 412
           I SWN+M+S Y +R   R ++    E+ S+ G+RPD +TF  +L +   +   E +H +V
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWV 173

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G   ++ V+ +LI  Y++   ++ A+++F +M  R++ +WN +I+GF  NG   + L
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           +    +   E++ D  T+S  L  CA+ + +  G  +H YV+K+ L S + + NA+I +Y
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMY 293

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           +K G L  + RVF+ M  +D +SWN++I+AY Q+ +   A+  FK M  VG ++PD  T 
Sbjct: 294 SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG-MRPDLLTV 352

Query: 593 TAVLS 597
            ++ S
Sbjct: 353 VSLAS 357



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 214/457 (46%), Gaps = 53/457 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   ++G+  +AL +  ++  + ++K D  ++S+ L  CA   +   G  +H Y +
Sbjct: 217 NAMISGFCQNGNVAEALRVLDRM-KTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVI 275

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL++   V+N ++++Y     L   +RVF  ++  D+ SW + ++A  +         
Sbjct: 276 KHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQ--------- 326

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                   D PV                 +G F+EM  + +R D  +  S+ S+   G L
Sbjct: 327 -------NDDPV---------------TALGFFKEMLFVGMRPDLLTVVSLASI--FGQL 362

Query: 205 ---EFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
                GR +H  V +  +    + + NAL+ MY   G++  A  VFE+      D IS+N
Sbjct: 363 SDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR--DVISWN 420

Query: 261 VMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSA---CLCPRVGYQVHAQAMK 316
            ++ G A  G   EA+  +  M    ++ P++ T+VS++ A       + G ++H + +K
Sbjct: 421 TLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIK 480

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +       V+   I MY  CG++++A  +F  + ++  V WN +IS+      G  A+  
Sbjct: 481 NCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQL 540

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFING---IITNIQVSNALISA 430
           + +M++ G++ D  TF SLL++   SG ++  E    F  +     I  N++    ++  
Sbjct: 541 FKDMRADGVKADHITFVSLLSACSHSGLVD--EAQWCFDTMQKEYRIKPNLKHYGCMVDL 598

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
           + +   +++AY +  NM  + +   W TL+    ++G
Sbjct: 599 FGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHG 635



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 8/184 (4%)

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            ++   SC  I+     KQ+H  +L       + L   ++TLYA  GDL  S   F  + 
Sbjct: 54  FNLVFRSCTNINV---AKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ 110

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            K+  SWN+++SAY + G  ++++ C   +  +  ++PD  TF  VL AC       DG 
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLA---DGE 167

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           ++    V   GF       + ++ L  R G ++ A +V     ++    +W A+ S    
Sbjct: 168 KM-HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVG-SWNAMISGFCQ 225

Query: 670 HGNL 673
           +GN+
Sbjct: 226 NGNV 229


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 203/681 (29%), Positives = 355/681 (52%), Gaps = 42/681 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S+S  +++C  L++ + G Q+    +++GL++   V N+++S+  +              
Sbjct: 145 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS-------------- 190

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                            MG+VDYA  +FD+M +RD   +N++     +NG+ +    +F 
Sbjct: 191 -----------------MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233

Query: 179 EMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M +     ++ + +++LSV       ++GR +H LV K GF  +V V N L+ MY   G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             V+A  VF++      D IS+N +M    + GR  +AL     M+ +    + +TF S 
Sbjct: 294 RSVEANLVFKQMP--TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  P     G  +H   + SG      + NA ++MY   G++ E+  +  ++  +D+
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHA 410
           V+WN +I  YA+      A+ A+  M+  G+  +  T  S+L++       +E  + +HA
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           ++   G  ++  V N+LI+ YAK   +  +  +F+ +  RNIITWN ++     +G   +
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+  S++    +  D+++ S  LS+ A+++ L  G+Q+HG  +K        + NA   
Sbjct: 532 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 591

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KCG++   +++    + +   SWN LISA  +HG  +E  + F  M ++G IKP   
Sbjct: 592 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG-IKPGHV 650

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++L+ACSH GLVD G   +D +  D+G  PA +H  C++DLLGR+G L EAE  I+ 
Sbjct: 651 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 710

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W +L ++C  HGNL  GR  A  L + E +  SVYVL SN++A  G WE+ 
Sbjct: 711 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 770

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            N+R+ +    + K+  CSW+
Sbjct: 771 ENVRKQMGFKNIKKKQACSWV 791



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 178/664 (26%), Positives = 318/664 (47%), Gaps = 62/664 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF---GNQLHA 81
           N  ++ + R G Y + +  F ++     +KP  + +++ + AC   R+ +    G Q+H 
Sbjct: 10  NTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHG 66

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKR-VFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  ++GL +  +V+  IL LY     LVS  R VF E+ + +V SWT+ +   +  G  +
Sbjct: 67  FVAKSGLLSDVYVSTAILHLY-GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 125

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
              +++  M    +        GC EN                       S + V+S C 
Sbjct: 126 EVIDIYKGMRGEGV--------GCNEN-----------------------SMSLVISSC- 153

Query: 201 AGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            GLL+    GRQ+   V KSG    ++V N+LI+M  + GNV  A  +F++      D I
Sbjct: 154 -GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER--DTI 210

Query: 258 SYNVMMDGLASVGRVEEA------LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
           S+N +    A  G +EE+      + RF D + ++   +  T +SV+      + G  +H
Sbjct: 211 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST---TVSTLLSVLGHVDHQKWGRGIH 267

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +K GF++   V N  + MY+  G+  EA ++F ++  KD++SWN++++++       
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 327

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+     M S G   +  TF S LA   +  F E   ++H  V ++G+  N  + NAL+
Sbjct: 328 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 387

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           S Y K   + ++ ++   M  R+++ WN LI G+  +  P + L  F  + +  +  +  
Sbjct: 388 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 447

Query: 489 TLSVALSSCARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T+   LS+C      L  GK +H Y++     S   + N++IT+YAKCGDL  S  +FN 
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  ++ I+WNA+++A A HG G+E +     M+  G +  DQ +F+  LSA +   ++++
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVLEE 566

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G ++    V   GF       +   D+  + G + E  +++    +     +W  L SA 
Sbjct: 567 GQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS-VNRSLPSWNILISAL 624

Query: 668 AAHG 671
             HG
Sbjct: 625 GRHG 628



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 265/533 (49%), Gaps = 14/533 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC--DAGLLEF 206
           MP R+   +N M++G    G    G+  FR+M  L ++  ++  AS+++ C     +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+H  V KSG    V V  A++ +Y   G V  + KVFEE      + +S+  +M G 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR--NVVSWTSLMVGY 118

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           +  G  EE +  ++ M    +  +E +   V+S+C   +   +G Q+  Q +KSG E+  
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           +V N+ I+M  S G +D A  IF ++ E+D +SWN++ + YAQ      +   +  M+  
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
               +  T  +LL+  G ++  +    IH  V   G  + + V N L+  YA   R  +A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  M  +++I+WN+L+  F+ +G  +  L     ++ S    +  T + AL++C   
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
                G+ +HG V+ + L     +GNA++++Y K G++  S RV   M  +D ++WNALI
Sbjct: 359 DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALI 418

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YA+  +  +A++ F+ M+  G +  +  T  +VLSAC   G + +  +   + +   G
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
           F   E   + ++ +  + G L  ++ + N   +  R+   W A+ +A A HG+
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWNAMLAANAHHGH 528



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 140/258 (54%), Gaps = 12/258 (4%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL-RH 505
           M  RN ++WNT+++G +  G  ++G++ F ++    ++P  + ++  +++C R  S+ R 
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G Q+HG+V K+ L+S + +  A++ LY   G + CS +VF  M +++ +SW +L+  Y+ 
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD---GTRIFDSMVNDYGFI 622
            GE +E +  +K M+  G +  ++ + + V+S+C   GL+ D   G +I   +V   G  
Sbjct: 121 KGEPEEVIDIYKGMRGEG-VGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKS-GLE 175

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
                 + ++ +LG  G +D A  + + Q  +  + +W ++ +A A +G++     I  L
Sbjct: 176 SKLAVENSLISMLGSMGNVDYANYIFD-QMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234

Query: 683 L--LEREQDKPSVYVLLS 698
           +     E +  +V  LLS
Sbjct: 235 MRRFHDEVNSTTVSTLLS 252



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  LA  +  GH ++ L L  ++ S   +  D +S S  L+A A L     G QLH
Sbjct: 513 IITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 571

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ G +    + N    +Y    ++  V ++     N  + SW   +SA  + G+ +
Sbjct: 572 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 631

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLF 177
             C  F +M +  +      + +++T C+  G  D G+  +
Sbjct: 632 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 672


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 203/681 (29%), Positives = 355/681 (52%), Gaps = 42/681 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S+S  +++C  L++ + G Q+    +++GL++   V N+++S+  +              
Sbjct: 162 SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGS-------------- 207

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                            MG+VDYA  +FD+M +RD   +N++     +NG+ +    +F 
Sbjct: 208 -----------------MGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250

Query: 179 EMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M +     ++ + +++LSV       ++GR +H LV K GF  +V V N L+ MY   G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             V+A  VF++      D IS+N +M    + GR  +AL     M+ +    + +TF S 
Sbjct: 311 RSVEANLVFKQMP--TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  P     G  +H   + SG      + NA ++MY   G++ E+  +  ++  +D+
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHA 410
           V+WN +I  YA+      A+ A+  M+  G+  +  T  S+L++       +E  + +HA
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           ++   G  ++  V N+LI+ YAK   +  +  +F+ +  RNIITWN ++     +G   +
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 548

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+  S++    +  D+++ S  LS+ A+++ L  G+Q+HG  +K        + NA   
Sbjct: 549 VLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAAD 608

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KCG++   +++    + +   SWN LISA  +HG  +E  + F  M ++G IKP   
Sbjct: 609 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG-IKPGHV 667

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++L+ACSH GLVD G   +D +  D+G  PA +H  C++DLLGR+G L EAE  I+ 
Sbjct: 668 TFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 727

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W +L ++C  HGNL  GR  A  L + E +  SVYVL SN++A  G WE+ 
Sbjct: 728 MPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDV 787

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            N+R+ +    + K+  CSW+
Sbjct: 788 ENVRKQMGFKNIKKKQACSWV 808



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 178/664 (26%), Positives = 318/664 (47%), Gaps = 62/664 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF---GNQLHA 81
           N  ++ + R G Y + +  F ++     +KP  + +++ + AC   R+ +    G Q+H 
Sbjct: 27  NTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHG 83

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKR-VFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  ++GL +  +V+  IL LY     LVS  R VF E+ + +V SWT+ +   +  G  +
Sbjct: 84  FVAKSGLLSDVYVSTAILHLY-GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 142

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
              +++  M    +        GC EN                       S + V+S C 
Sbjct: 143 EVIDIYKGMRGEGV--------GCNEN-----------------------SMSLVISSC- 170

Query: 201 AGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            GLL+    GRQ+   V KSG    ++V N+LI+M  + GNV  A  +F++      D I
Sbjct: 171 -GLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSER--DTI 227

Query: 258 SYNVMMDGLASVGRVEEA------LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
           S+N +    A  G +EE+      + RF D + ++   +  T +SV+      + G  +H
Sbjct: 228 SWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNST---TVSTLLSVLGHVDHQKWGRGIH 284

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +K GF++   V N  + MY+  G+  EA ++F ++  KD++SWN++++++       
Sbjct: 285 GLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSL 344

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+     M S G   +  TF S LA   +  F E   ++H  V ++G+  N  + NAL+
Sbjct: 345 DALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALV 404

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           S Y K   + ++ ++   M  R+++ WN LI G+  +  P + L  F  + +  +  +  
Sbjct: 405 SMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYI 464

Query: 489 TLSVALSSCARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T+   LS+C      L  GK +H Y++     S   + N++IT+YAKCGDL  S  +FN 
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  ++ I+WNA+++A A HG G+E +     M+  G +  DQ +F+  LSA +   ++++
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG-VSLDQFSFSEGLSAAAKLAVLEE 583

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G ++    V   GF       +   D+  + G + E  +++    +     +W  L SA 
Sbjct: 584 GQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPS-VNRSLPSWNILISAL 641

Query: 668 AAHG 671
             HG
Sbjct: 642 GRHG 645



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 273/548 (49%), Gaps = 14/548 (2%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           TK G V  A  +FD MP R+   +N M++G    G    G+  FR+M  L ++  ++  A
Sbjct: 3   TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62

Query: 194 SVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           S+++ C     +   G Q+H  V KSG    V V  A++ +Y   G V  + KVFEE   
Sbjct: 63  SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGY 308
              + +S+  +M G +  G  EE +  ++ M    +  +E +   V+S+C   +   +G 
Sbjct: 123 R--NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+  Q +KSG E+  +V N+ I+M  S G +D A  IF ++ E+D +SWN++ + YAQ  
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
               +   +  M+      +  T  +LL+  G ++  +    IH  V   G  + + V N
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            L+  YA   R  +A  +F  M  +++I+WN+L+  F+ +G  +  L     ++ S    
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  T + AL++C        G+ +HG V+ + L     +GNA++++Y K G++  S RV 
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M  +D ++WNALI  YA+  +  +A++ F+ M+  G +  +  T  +VLSAC   G +
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPGDL 479

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALF 664
            +  +   + +   GF   E   + ++ +  + G L  ++ + N   +  R+   W A+ 
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRNIITWNAML 537

Query: 665 SACAAHGN 672
           +A A HG+
Sbjct: 538 AANAHHGH 545



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 201/424 (47%), Gaps = 11/424 (2%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G V  A  +F+     V + +S+N MM G+  VG   E +  FR M    ++PS 
Sbjct: 1   MYTKFGRVKPARHLFDIMP--VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58

Query: 292 LTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
               S+++AC       R G QVH    KSG  +   VS A + +Y   G +  +  +F 
Sbjct: 59  FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---M 404
            + ++++VSW +++  Y+ +      I  Y  M+  G+  +E +   +++S G ++   +
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              I   V  +G+ + + V N+LIS       +  A  IF  MS R+ I+WN++   +  
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NG   +  + FS +       +  T+S  LS    +   + G+ IHG V+K    S + +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            N ++ +YA  G    +  VF  M  KD ISWN+L++++   G   +A+    +M   G+
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
              +  TFT+ L+AC      + G RI   +V   G    +   + ++ + G+ G + E+
Sbjct: 359 -SVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSES 416

Query: 645 ERVI 648
            RV+
Sbjct: 417 RRVL 420



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  LA  +  GH ++ L L  ++ S   +  D +S S  L+A A L     G QLH
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 588

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ G +    + N    +Y    ++  V ++     N  + SW   +SA  + G+ +
Sbjct: 589 GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLF 177
             C  F +M +  +      + +++T C+  G  D G+  +
Sbjct: 649 EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 689


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 203/655 (30%), Positives = 337/655 (51%), Gaps = 64/655 (9%)

Query: 132 ACTKMGHVDYACEVFD-KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           +C  +G      E  D K+ D     YN  I    E G     + L  +  K D+    Y
Sbjct: 50  SCATIGTSVLPSETIDCKITD-----YNIEICRFCELGNLRRAMELINQSPKPDLELRTY 104

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
              SVL +C D   ++ GR++HS++  +       + + L+ MY  CG++ +  ++F++ 
Sbjct: 105 --CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 250 ------------KGYVC-----------------------------------DHISYNVM 262
                        GY                                     D IS+N M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G  S G  E+ L  F  ML+  +     T VSV++ C       +G  +H  A+K+ F
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               +++N  + MYS  G ++ A  +F  + E+ +VSW +MI+ YA+  L   ++  + E
Sbjct: 283 GKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHE 342

Query: 380 MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  GI PD FT  ++L   A +G +E  + +H ++  N + +++ VSNAL+  YAK   
Sbjct: 343 MEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGS 402

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A+ +F  M  ++I++WNT+I G+  N  P + L  F E+  +  +P+  T++  L +
Sbjct: 403 MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPA 461

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA +++L  G++IHG++L+N       + NA++ +Y KCG L  +  +F+M+ EKD +SW
Sbjct: 462 CASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSW 521

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
             +I+ Y  HG G EA++ F  M++ G I+PD+ +F ++L ACSH+GL+D+G   F+ M 
Sbjct: 522 TVMIAGYGMHGYGSEAIAAFNEMRNSG-IEPDEVSFISILYACSHSGLLDEGWGFFNMMR 580

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
           N+    P  +H +C++DLL RAG L +A + I    I+  +  W AL   C  + +++L 
Sbjct: 581 NNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLA 640

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +A  + E E +    YVLL+NIYA A  WEE   +RE + R G+ K PGCSWI
Sbjct: 641 EKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWI 695



 Score =  229 bits (583), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 160/600 (26%), Positives = 292/600 (48%), Gaps = 36/600 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI +      G+ + A+ L   I+ S K   ++ +  + L  CA+L++   G ++H+   
Sbjct: 72  NIEICRFCELGNLRRAMEL---INQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQ 128

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH------ 138
              ++    + + ++ +Y    DL   +R+F ++ N  V+ W   ++   K+G+      
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188

Query: 139 ------------VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
                       V+ A ++FD++ DRD+  +N+MI+G   NG  + G+ LF +M  L + 
Sbjct: 189 LFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGIN 248

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D  +  SV++ C + G+L  GR LH    K+ F   +++ N L+ MY   GN+  A +V
Sbjct: 249 TDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQV 308

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           FE         +S+  M+ G A  G  + ++  F +M    + P   T  +++ AC C  
Sbjct: 309 FETMGERSV--VSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           +   G  VH    ++  ++   VSNA + MY+ CG + +A  +F+ +Q KDIVSWNTMI 
Sbjct: 367 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 426

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
            Y++ +L   A+  ++EMQ    +P+  T   +L   AS   +E  + IH  +  NG   
Sbjct: 427 GYSKNSLPNEALNLFVEMQ-YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSL 485

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           +  V+NAL+  Y K   +  A  +F  +  +++++W  +I G+ ++G+  + +  F+E+ 
Sbjct: 486 DRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMR 545

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL 538
            S + PDE +    L +C+    L  G      +  N  I   S   A ++ L A+ G+L
Sbjct: 546 NSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNL 605

Query: 539 DCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
             + +   MM IE D   W AL+     + + K A    K  + V  ++P+   +  +L+
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAE---KVAEHVFELEPENTGYYVLLA 662



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   S++    +AL+LFV++   +  KP+  +++  L ACA+L     G ++H
Sbjct: 418 IVSWNTMIGGYSKNSLPNEALNLFVEMQ--YNSKPNSITMACILPACASLAALERGQEIH 475

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + LR G     HVAN ++ +Y     L   + +F  I   D+ SWT  ++     G+  
Sbjct: 476 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 535

Query: 141 YACEVFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            A   F++M     + D   + +++  C+ +G  D G G F  M
Sbjct: 536 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579


>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
 gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
          Length = 625

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 200/585 (34%), Positives = 319/585 (54%), Gaps = 15/585 (2%)

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
           + +SA T+ G +  A +VFD + ++DL  +N+M+   +++G+ +  + LFR   K+DV  
Sbjct: 47  SLVSAYTRSGDLRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFR---KMDVEP 103

Query: 188 DNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           D+ ++AS+L  C A  LLE G+++H+ V++S F    ++  ALI MY  CG +  A +VF
Sbjct: 104 DSITYASILGACSAMELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVF 163

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR- 305
           +  +    D   +N M+ GL   GR  EAL  F  M   S+R  ++++++++SAC     
Sbjct: 164 DGIQSV--DPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALED 221

Query: 306 --VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMIS 362
              G ++H  A   G +    V  A   MYS C ++D A  +F  + EK ++VSWN+MI+
Sbjct: 222 LHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIA 281

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIIT 419
            YAQ   GR A+  Y  M+  G++PD+ T+   L    S G       IH+ +  + I T
Sbjct: 282 AYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRT 341

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ +  A+++ YAK   ++ A   F  M  +N +TW+ ++  F+  G+  + L  +  ++
Sbjct: 342 DVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMV 401

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDL 538
               +P E TL+ AL++C+RI +L+ GK IH  +     +   + L N+++ +YAKCG L
Sbjct: 402 SEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYAKCGCL 461

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +  +F+ +  +D+ SWN +I  +A HG+  E +S    M   G + PD  TF  VL A
Sbjct: 462 AIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDG-VDPDYVTFACVLLA 520

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSHAGL+D G   F SM  DY   P  DH  C++D+L RAG+  EAE +  +     R  
Sbjct: 521 CSHAGLLDRGRSHFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPFTPRPV 580

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            W  L  AC  HG  + G   A  LLE   +  S YVLLSN+ A 
Sbjct: 581 TWTTLLGACKLHGETKRGVEAARSLLELGFECSSSYVLLSNLVAG 625



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 226/433 (52%), Gaps = 15/433 (3%)

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R +  +F+ V S C +G  E    + + +  S F   V V N+L++ Y   G++  A KV
Sbjct: 7   RPNGVTFSGVASSC-SGREELD-TIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKV 64

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP- 304
           F+  +    D IS+N M+   +  G  EE L  FR M V    P  +T+ S++ AC    
Sbjct: 65  FDSIENK--DLISWNSMVVAYSQHGHGEEMLELFRKMDV---EPDSITYASILGACSAME 119

Query: 305 --RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G +VHA+  +S F++  +++ A I MYS CG ++ A  +F  +Q  D   WN MIS
Sbjct: 120 LLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMIS 179

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIIT 419
              Q    R A+  +  M++  +R D+ ++ ++L++   +E +     IH      G+  
Sbjct: 180 GLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGMDK 239

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSEL 478
           ++ V  A+ + Y+K  ++  A ++F  M+ + N+++WN++I  +  +G   + L+ +  +
Sbjct: 240 DLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELM 299

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
               ++PD+ T + AL +C        G +IH  + ++ + + + L  A++ +YAKCG+L
Sbjct: 300 KEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGEL 359

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + ++  F  M  K+ ++W+A++ A+ Q G  +EA+  +  M   G  +P + T    L+A
Sbjct: 360 ETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDLYLRMVSEG-FQPSEITLAGALAA 418

Query: 599 CSHAGLVDDGTRI 611
           CS  G + +G  I
Sbjct: 419 CSRIGALQEGKAI 431



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 144/574 (25%), Positives = 260/574 (45%), Gaps = 48/574 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   S+ GH ++ L LF ++     ++PD  + ++ L AC+ +     G ++H
Sbjct: 73  LISWNSMVVAYSQHGHGEEMLELFRKM----DVEPDSITYASILGACSAMELLELGKEVH 128

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A   R+  K+ P +A  ++++Y     L S +RVF  IQ+ D   W              
Sbjct: 129 ARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPW-------------- 174

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            NAMI+G  ++G     +GLF  M    VR D  S+ ++LS C 
Sbjct: 175 -----------------NAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACC 217

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           A   L  G ++H   +  G    + V  A+  MY  C  V  A K+F +      + +S+
Sbjct: 218 ALEDLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMF-DGMNEKTNVVSW 276

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMK 316
           N M+   A  GR  EAL  +  M    ++P ++T+   + AC        G ++H++  +
Sbjct: 277 NSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYGGSAKGAEIHSRITE 336

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S       +  A + MY+ CG+++ A   F +++ K+ V+W+ M+  + Q+   R A+  
Sbjct: 337 SKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVGAFIQQGYDREALDL 396

Query: 377 YLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITN-IQVSNALISAYA 432
           YL M S G +P E T    LA+    G ++  + IH+ +     + N + + N+L++ YA
Sbjct: 397 YLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMYA 456

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +  A  +F N+  R+  +WNT+I G   +G   + L    E++   + PD  T + 
Sbjct: 457 KCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVDPDYVTFAC 516

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCG-DLDCSLRVFNMMI 549
            L +C+    L  G+  H   +  +   K  L +   ++ + ++ G   +       M  
Sbjct: 517 VLLACSHAGLLDRGRS-HFLSMTGDYCIKPMLDHYECLVDVLSRAGWAREAEALAMAMPF 575

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
               ++W  L+ A   HGE K  V   +++ ++G
Sbjct: 576 TPRPVTWTTLLGACKLHGETKRGVEAARSLLELG 609



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 193/371 (52%), Gaps = 17/371 (4%)

Query: 282 MLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           ML+   RP+ +TF  V S+C        + A    S F +   V N+ ++ Y+  G +  
Sbjct: 1   MLLEGFRPNGVTFSGVASSCSGREELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRS 60

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A  +F  ++ KD++SWN+M+  Y+Q   G   +  + +M    + PD  T+ S+L +   
Sbjct: 61  ARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSA 117

Query: 402 IEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +E++E+   +HA V  +   ++  ++ ALI+ Y+K   ++ A ++F  +   +   WN +
Sbjct: 118 MELLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAM 177

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+G + +G   + L  F  +    +R D+ +    LS+C  +  L  G +IH +     +
Sbjct: 178 ISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALEDLHEGIRIHEHASACGM 237

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFK 577
              + +  A+  +Y+KC  +D + ++F+ M EK + +SWN++I+AYAQ G G+EA+  ++
Sbjct: 238 DKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYE 297

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDG----TRIFDSMVNDYGFIPAEDHLSCMLD 633
            M++ G ++PD  T+   L AC+  G    G    +RI +S +    F+      + +++
Sbjct: 298 LMKEEG-VQPDDITYAGALGACTSYGGSAKGAEIHSRITESKIRTDVFLD-----TAIVN 351

Query: 634 LLGRAGYLDEA 644
           +  + G L+ A
Sbjct: 352 MYAKCGELETA 362



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 103/198 (52%), Gaps = 11/198 (5%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L+   RP+  T S   SSC+    L     I   +  ++  S + + N++++ Y + GD
Sbjct: 1   MLLEGFRPNGVTFSGVASSCSGREEL---DTIQASIAASDFHSNVVVKNSLVSAYTRSGD 57

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  + +VF+ +  KD ISWN+++ AY+QHG G+E +  F+ M     ++PD  T+ ++L 
Sbjct: 58  LRSARKVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD----VEPDSITYASILG 113

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACS   L++ G  +  + V+   F       + ++++  + G L+ A RV +   IQ+  
Sbjct: 114 ACSAMELLELGKEVH-ARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDG--IQSVD 170

Query: 658 DNWW-ALFSACAAHGNLR 674
            + W A+ S    HG  R
Sbjct: 171 PSPWNAMISGLVQHGRAR 188


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 203/616 (32%), Positives = 334/616 (54%), Gaps = 19/616 (3%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DV 185
           T  ++    +G V  +   FD++P +D+  +N+MI+    NG+    IG F ++  + ++
Sbjct: 155 TRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEI 214

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R D Y+F  VL  C  G L  GR++H    K GF   V V  +LI MY   G    A  +
Sbjct: 215 RPDFYTFPPVLKAC--GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 272

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F++      D  S+N M+ GL   G   +AL    +M +  ++ + +T VS++   +CP+
Sbjct: 273 FDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILP--VCPQ 328

Query: 306 VG-----YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           +G       +H   +K G E    VSNA I MY+  G +++A   F ++   D+VSWN++
Sbjct: 329 LGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSI 388

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING- 416
           I+ Y Q +   +A   +++MQ  G +PD  T     S++A S   +    +H F+   G 
Sbjct: 389 IAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGW 448

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++ ++ + NA++  YAK   +  A+++F  +  +++I+WNTLI G+  NG   + ++ + 
Sbjct: 449 LMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508

Query: 477 ELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            +    E+ P++ T    L + A + +L+ G +IHG V+K NL   + +   +I +Y KC
Sbjct: 509 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKC 568

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L  ++ +F  + ++ +++WNA+IS +  HG  ++ +  F  M D G +KPD  TF ++
Sbjct: 569 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEG-VKPDHVTFVSL 627

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSH+G V++G   F  ++ +YG  P+  H  CM+DLLGRAGYL+ A   I    +Q 
Sbjct: 628 LSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQP 686

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            +  W AL  AC  HGN+ LG+  +  L E +      YVLLSNIYA  G WE    +R 
Sbjct: 687 DASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 746

Query: 716 LLKRTGVIKQPGCSWI 731
           L +  G+ K PG S I
Sbjct: 747 LARERGLKKTPGWSTI 762



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 161/538 (29%), Positives = 270/538 (50%), Gaps = 25/538 (4%)

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           F + LH+L+  +G    + +   L+ +Y N G+V  +   F++      D  ++N M+  
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK--DVYTWNSMISA 191

Query: 266 LASVGRVEEALIRFRD-MLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
               G   EA+  F   +LV+ +RP   TF  V+ AC     G ++H  A K GF+    
Sbjct: 192 YVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVF 251

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V+ + I MYS  G    A  +F  +  +D+ SWN MIS   Q      A+    EM+  G
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I+ +  T  S+L      G I    +IH +V  +G+  ++ VSNALI+ YAK   ++ A 
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           + F  M   ++++WN++I  +  N  PV     F ++ ++  +PD  TL    S  A+  
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSR 431

Query: 502 SLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             ++ + +HG++++   L+  + +GNA++ +YAK G LD + +VF +++ KD ISWN LI
Sbjct: 432 DCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLI 491

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + YAQ+G   EA+  +K M++   I P+Q T+ ++L A +H G +  G RI   +     
Sbjct: 492 TGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV----- 546

Query: 621 FIPAEDHL-----SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            I    HL     +C++D+ G+ G L +A  +   Q  Q  S  W A+ S    HG+   
Sbjct: 547 -IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF-YQVPQESSVTWNAIISCHGIHGHAEK 604

Query: 676 GRIIAGLLLEREQDKPS--VYVLLSNIYAAAGLWEEAANIRELLKRTGV---IKQPGC 728
              + G +L+ E  KP    +V L +  + +G  EE      L++  G+   +K  GC
Sbjct: 605 TLKLFGEMLD-EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGC 661



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 247/544 (45%), Gaps = 46/544 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +GH+ +A+  F Q+    +++PD Y+    L AC  L +   G ++H +A + G +    
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVF 251

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VA +++ +Y                               ++ G    A  +FD MP RD
Sbjct: 252 VAASLIHMY-------------------------------SRFGFTGIARSLFDDMPFRD 280

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
           +  +NAMI+G  +NG     + +  EM    ++ +  +  S+L VC   G +     +H 
Sbjct: 281 MGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHL 340

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            V K G    + V NALI MY   GN+ DA K F++   ++ D +S+N ++         
Sbjct: 341 YVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQM--FITDVVSWNSIIAAYEQNDDP 398

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV-SNA 328
             A   F  M +   +P  LT VS+ S     R       VH   M+ G+     V  NA
Sbjct: 399 VTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNA 458

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRP 387
            + MY+  G +D A  +F  +  KD++SWNT+I+ YAQ  L   AI  Y  M+    I P
Sbjct: 459 VVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++ T+ S+L   A  G ++    IH  V    +  ++ V+  LI  Y K  R+  A  +F
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + +   + +TWN +I+   ++G   + L+ F E+L   ++PD  T    LS+C+    + 
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAY 563
            GK     + +  +   +     M+ L  + G L+ +   + +M ++ D   W AL+ A 
Sbjct: 639 EGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGAC 698

Query: 564 AQHG 567
             HG
Sbjct: 699 RIHG 702



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 101/452 (22%), Positives = 204/452 (45%), Gaps = 44/452 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L ++G+   AL +  ++     +K +  ++ + L  C  L + +    +H Y +
Sbjct: 285 NAMISGLIQNGNAAQALDVLDEMRLE-GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVI 343

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+    V+N ++++Y    +L   ++ F ++   DV SW + ++A  +         
Sbjct: 344 KHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQ--------- 394

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
                   D PV        T +G+       F +M     + D  +  S+ S V  +  
Sbjct: 395 -------NDDPV--------TAHGF-------FVKMQLNGFQPDLLTLVSLASIVAQSRD 432

Query: 204 LEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  R +H  + + G+    V + NA++ MY   G +  A KVFE     V D IS+N +
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII--LVKDVISWNTL 490

Query: 263 MDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           + G A  G   EA+  ++ M     + P++ T+VS++ A       + G ++H + +K+ 
Sbjct: 491 ITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTN 550

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V+   I +Y  CG++ +A  +F ++ ++  V+WN +IS +         +  + 
Sbjct: 551 LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFG 610

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           EM   G++PD  TF SLL++   SGF+E  +     +   GI  +++    ++    +  
Sbjct: 611 EMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAG 670

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
            ++ AY    +M  + +   W  L+    ++G
Sbjct: 671 YLEMAYGFIKDMPLQPDASIWGALLGACRIHG 702



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 5/222 (2%)

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +G + +E  F  L  SS      + +HA + + G + +I +S  L++ YA    +  +  
Sbjct: 113 LGNQNEEIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRC 172

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARIS 501
            F  +  +++ TWN++I+ ++ NG   + +  F +LL+ SE+RPD YT    L +C    
Sbjct: 173 TFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG--- 229

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  G++IH +  K      + +  ++I +Y++ G    +  +F+ M  +D  SWNA+IS
Sbjct: 230 TLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMIS 289

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
              Q+G   +A+     M+  G IK +  T  ++L  C   G
Sbjct: 290 GLIQNGNAAQALDVLDEMRLEG-IKMNFVTVVSILPVCPQLG 330



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/190 (17%), Positives = 84/190 (44%), Gaps = 5/190 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   +++G   +A+ ++  +    ++ P+  +  + L A A++     G ++H
Sbjct: 484 VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIH 543

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++  L     VA  ++ +Y     LV    +F ++      +W   +S     GH +
Sbjct: 544 GRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAE 603

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              ++F +M D     D   + ++++ C+ +G+ + G   FR M +  ++     +  ++
Sbjct: 604 KTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMV 663

Query: 197 SVCD-AGLLE 205
            +   AG LE
Sbjct: 664 DLLGRAGYLE 673


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 212/670 (31%), Positives = 343/670 (51%), Gaps = 44/670 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           +A  G Q+HA A+  GL     VAN ++++Y                             
Sbjct: 115 DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGG--------------------------- 147

Query: 132 ACTKMGHVDYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
                G VD A  VFD+   DR+   +N M++   +N      + LF EM    VR + +
Sbjct: 148 ----FGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEF 203

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     LE GR++H++V ++G+   V   NAL+ MY   G++  A  VF   
Sbjct: 204 GFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVF--G 261

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY- 308
           K    D +S+N  + G    G  + AL     M  + L P+  T  S++ AC     G  
Sbjct: 262 KVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAF 321

Query: 309 ----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
               Q+H   +K+  ++   +  A + MY+  G +D+A  +F  +  KD++ WN +IS  
Sbjct: 322 ALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGC 381

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNI 421
           +       ++  +  M+  G   +  T  ++L S+  +E +     +HA     G +++ 
Sbjct: 382 SHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDS 441

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V N LI +Y K   ++ A ++F   S  NII + ++I            ++ F E+L  
Sbjct: 442 HVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRK 501

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            L PD + LS  L++CA +S+   GKQ+H +++K   ++ +  GNA++  YAKCG ++ +
Sbjct: 502 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDA 561

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
              F+ + +K  +SW+A+I   AQHG GK A+  F+ M D  RI P+  T T+VL AC+H
Sbjct: 562 DLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVD-ERIAPNHITLTSVLCACNH 620

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGLVD+    F SM   +G    E+H SCM+DLLGRAG LD+A  ++NS   +A +  W 
Sbjct: 621 AGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWG 680

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL +A   H +  LG++ A  L   E +K   +VLL+N YA+AG+W+E A +R+L+K + 
Sbjct: 681 ALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSK 740

Query: 722 VIKQPGCSWI 731
           V K+P  SW+
Sbjct: 741 VKKEPAMSWV 750



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 153/568 (26%), Positives = 265/568 (46%), Gaps = 47/568 (8%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S+S  L   A  ++   G  +HA+ L++GL       N +LS Y   R   S +RVF E 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            +P   SW++                               ++T  + N      +  FR
Sbjct: 64  PDPCHVSWSS-------------------------------LVTAYSNNALPREALAAFR 92

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M    VR + ++   VL    DAGL   G Q+H++   +G S  + V NAL+ MY   G
Sbjct: 93  AMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVSTGLSGDIFVANALVAMYGGFG 149

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            V +A +VF+EA     + +S+N MM       R  +A+  F +M+ + +RP+E  F  V
Sbjct: 150 FVDEARRVFDEA-ARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCV 208

Query: 298 MSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC   R    G +VHA  +++G++     +NA + MYS  G I  A ++F ++ + D+
Sbjct: 209 VNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDV 268

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-----ASSGFIEMVEMIH 409
           VSWN  IS        + A+   L+M+S G+ P+ FT  S+L     A +G   +   IH
Sbjct: 269 VSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIH 328

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
            F+      ++  +  AL+  YAK   +  A ++F  +  ++++ WN LI+G    G   
Sbjct: 329 GFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHG 388

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  F  +       +  TL+  L S A + ++    Q+H    K   +S   + N +I
Sbjct: 389 ESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLI 448

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
             Y KC  L  + +VF      + I++ ++I+A +Q   G++A+  F  M   G ++PD 
Sbjct: 449 DSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKG-LEPDP 507

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVN 617
              +++L+AC+     + G ++   ++ 
Sbjct: 508 FVLSSLLNACASLSAYEQGKQVHAHLIK 535



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 187/372 (50%), Gaps = 15/372 (4%)

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  +HA  +KSG     +  N  ++ YS C     A  +F    +   VSW+++++ Y+
Sbjct: 22  LGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYS 79

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN 425
              L R A+ A+  M++ G+R +EF    +L  +    +   +HA     G+  +I V+N
Sbjct: 80  NNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGLGVQVHAVAVSTGLSGDIFVAN 139

Query: 426 ALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           AL++ Y     + +A ++F   +  RN ++WN +++ F+ N      ++ F E++ S +R
Sbjct: 140 ALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVR 199

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P+E+  S  +++C     L  G+++H  V++      +   NA++ +Y+K GD+  +  V
Sbjct: 200 PNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALV 259

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  + + D +SWNA IS    HG  + A+     M+  G + P+  T +++L AC+ AG 
Sbjct: 260 FGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV-PNVFTLSSILKACAGAGA 318

Query: 605 VDDGT--RIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAERVINSQHIQARSD--N 659
                  +I   M+       ++D++   ++D+  + G LD+A +V        R D   
Sbjct: 319 GAFALGRQIHGFMIK--ACADSDDYIGVALVDMYAKYGLLDDARKVFE---WIPRKDLLL 373

Query: 660 WWALFSACAAHG 671
           W AL S C +HG
Sbjct: 374 WNALISGC-SHG 384



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 221/541 (40%), Gaps = 90/541 (16%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DA+ LF ++  S  ++P+ +  S  + AC   R+   G ++HA  +R G       AN +
Sbjct: 185 DAVELFGEMVWS-GVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANAL 243

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL---- 154
           + +Y    D+     VF ++   DV SW  F+S C   GH  +A E+  +M    L    
Sbjct: 244 VDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNV 303

Query: 155 ----------------------PVYNAMITGCTENGYEDIGIGLF------------REM 180
                                  ++  MI  C ++  + IG+ L             R++
Sbjct: 304 FTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD-DYIGVALVDMYAKYGLLDDARKV 362

Query: 181 HKLDVRRDNYSFASVLSVCDAG------LLEFGR-------------------------- 208
            +   R+D   + +++S C  G      L  F R                          
Sbjct: 363 FEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAI 422

Query: 209 ----QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMM 263
               Q+H+L  K GF     VVN LI  Y+ C  +  A KVFEE   +  D+ I++  M+
Sbjct: 423 SDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEE---HSSDNIIAFTSMI 479

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             L+     E+A+  F +ML   L P      S+++AC        G QVHA  +K  F 
Sbjct: 480 TALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFM 539

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                 NA +  Y+ CG I++A + F+ L +K +VSW+ MI   AQ   G+ A+  +  M
Sbjct: 540 TDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRM 599

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF----INGIITNIQVSNALISAYAKNER 436
               I P+  T  S+L +     +V+    +      + GI    +  + +I    +  +
Sbjct: 600 VDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGK 659

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A ++ ++M    N   W  L+    ++  P  G     +L +  L P++    V L+
Sbjct: 660 LDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFV--LEPEKSGTHVLLA 717

Query: 496 S 496
           +
Sbjct: 718 N 718



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS+  H +DA+ LF+++     L+PD + LS+ L ACA+L     G Q+HA+ ++     
Sbjct: 482 LSQCDHGEDAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT 540

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                N ++  Y     +      FS + +  V SW+  +    + GH   A +VF +M 
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMV 600

Query: 151 DRDLP----VYNAMITGCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
           D  +        +++  C   G  D   G F   +EM  +D   ++YS
Sbjct: 601 DERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYS 648


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 202/648 (31%), Positives = 341/648 (52%), Gaps = 52/648 (8%)

Query: 95  ANTILS-LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +N +LS L KN R +   +++F ++   D Y+W   +SA   +G++  A ++F++ P ++
Sbjct: 40  SNQLLSELSKNGR-VDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIKN 98

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
              ++++++G  +NG E  G+  F +M     +   Y+  SVL  C    LL  G+ +H 
Sbjct: 99  SITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHC 158

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEAKGYVCDHISYNVMMDGLASV 269
              K      + V   L+ MY  C  +++A  +F    + K YV     +  M+ G A  
Sbjct: 159 YAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYV----QWTAMLTGYAQN 214

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
           G   +A+  F++M    +  +  TF S+++AC        G QVH   + SGF     V 
Sbjct: 215 GESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQ 274

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A + MY+ CG +  A MI   ++  D+V WN+MI           A++ + +M +  IR
Sbjct: 275 SALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIR 334

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D+FT+ S+L   AS   +++ E +H+     G      VSNAL+  YAK   +  A  +
Sbjct: 335 IDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDV 394

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ +  +++I+W +L+ G++ NGF  + LQ F ++  + +  D++ ++   S+CA ++ +
Sbjct: 395 FNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVI 454

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+Q+H   +K++  S +S  N++IT+YAKCG L+ ++RVF+ M  ++ ISW A+I  Y
Sbjct: 455 EFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGY 514

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           AQ+G  +   S F++M+ V  IKP                                    
Sbjct: 515 AQNGLVETGQSYFESMEKVYGIKP------------------------------------ 538

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
           A DH +CM+DLLGRAG ++EAE ++N   ++  +  W +L SAC  HGNL LG      L
Sbjct: 539 ASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNL 598

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++ E      YVLLSN+++ AG WE+AA+IR  +K  G+ K+PG SWI
Sbjct: 599 IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWI 646



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/593 (25%), Positives = 279/593 (47%), Gaps = 81/593 (13%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   + L  F Q+ S  + KP  Y+L + L AC+ L     G  +H YA++  L+A  
Sbjct: 111 KNGCEVEGLRQFSQMWSDGQ-KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANI 169

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA  ++ +Y                            S C  +   +Y   +F  +PDR
Sbjct: 170 FVATGLVDMY----------------------------SKCKCLLEAEY---LFFSLPDR 198

Query: 153 DLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
              V + AM+TG  +NG     I  F+EM    +  ++++F S+L+ C +     FGRQ+
Sbjct: 199 KNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQV 258

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  +  SGF   V V +AL+ MY  CG++  A  + +  +  + D + +N M+ G  + G
Sbjct: 259 HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME--IDDVVCWNSMIVGCVTHG 316

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
            +EEAL+ F  M    +R  + T+ SV   +++C   ++G  VH+  +K+GF+A  +VSN
Sbjct: 317 YMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSN 376

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+  G +  A  +F ++ +KD++SW ++++ Y        A+  + +M++  +  
Sbjct: 377 ALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDL 436

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+F    + ++   + ++E    +HA    +   + +   N+LI+ YAK   ++ A ++F
Sbjct: 437 DQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVF 496

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            +M  RN+I+W  +I G+  NG    G  +F  +                          
Sbjct: 497 DSMETRNVISWTAIIVGYAQNGLVETGQSYFESM-------------------------- 530

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAY 563
             ++++G    ++  +       MI L  + G ++ +  + N M +E D   W +L+SA 
Sbjct: 531 --EKVYGIKPASDHYA------CMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSAC 582

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
             HG  +      +A +++ +++P  +    +LS   S AG  +D   I  +M
Sbjct: 583 RVHGNLELGE---RAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAM 632



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 39/365 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   +++G    A+  F ++ +   ++ + ++  + L AC ++   AFG Q+H   + +G
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRN-QGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSG 266

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V + ++ +Y    DL S + +   ++  DV  W + +  C   G+++ A  +F 
Sbjct: 267 FGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFH 326

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
           KM +R                               D+R D++++ SVL S+     L+ 
Sbjct: 327 KMHNR-------------------------------DIRIDDFTYPSVLKSLASCKNLKI 355

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +HSL  K+GF    +V NAL+ MY   GN+  A  VF +      D IS+  ++ G 
Sbjct: 356 GESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK--DVISWTSLVTGY 413

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
              G  E+AL  F DM  A +   +     V SAC    V   G QVHA  +KS   +  
Sbjct: 414 VHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLL 473

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S  N+ ITMY+ CG +++A  +F  ++ ++++SW  +I  YAQ  L  +    +  M+ V
Sbjct: 474 SAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKV 533

Query: 384 -GIRP 387
            GI+P
Sbjct: 534 YGIKP 538


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 230/718 (32%), Positives = 364/718 (50%), Gaps = 62/718 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ GH ++ L LF ++      KPD +  ST L AC++      G  +H  A+ AG++  
Sbjct: 103 AKEGHLREVLGLFRKMQLD-GTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGMETQ 161

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N I++LY                                K G V  A  VF+++P+
Sbjct: 162 V-VGNAIVNLY-------------------------------GKCGRVHEAKAVFERLPE 189

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFASVLSVCDAGL-LEFGR 208
           R+L  +NA+I    +NG+    + +F  M  LD  VR ++ +F SV+  C   L L  G+
Sbjct: 190 RNLVSWNALIAANAQNGHCKDAMQVFHLM-DLDGSVRPNDATFVSVVDACSNLLDLPRGK 248

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
             H  + ++GF   + V N+L+ MY  CG+V  A  VFE+      + +S+ VM+   A 
Sbjct: 249 STHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSR--NVVSWTVMIWAYAQ 306

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G +  A   ++ M      P+ +TF++VM +CL P       Q+HA  + SGF++   +
Sbjct: 307 QGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVL 363

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEK--DIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
               +TMY  CG +D A  IF  L+E+  + V+WN MIS  AQ    + A+  + +M+  
Sbjct: 364 QVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELE 423

Query: 384 GIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+RP+  T+  SL A S   ++     +HA + +  I     +SNA+I+ Y K   + +A
Sbjct: 424 GVRPNSVTYLASLEACSSLNDLTRGRQLHARILLENI-HEANLSNAVINMYGKCGSLDEA 482

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
              F  M  R++++WNT+I  +  +G   Q L+ F ++ +     D  T   A+ +C  +
Sbjct: 483 MDEFAKMPERDVVSWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSV 542

Query: 501 SSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            SL  GK IH  V      L     +  A++T+YA+CG L  +  VF     ++ ++W+ 
Sbjct: 543 PSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSN 602

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LI+A AQHG   EA+  F+ MQ  G  KPD  TF+ +++ACS  G+V DG   F SMV D
Sbjct: 603 LIAACAQHGRENEALDLFREMQLQG-TKPDALTFSTLVAACSRRGVVKDGVFYFVSMVED 661

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           Y    +EDH   M+DLLGRAG+L+EAE+V+              L  AC  HG++  G  
Sbjct: 662 YSIPASEDHFGGMVDLLGRAGWLEEAEQVMRKNPCALAHA---VLLGACHVHGDVERGIR 718

Query: 679 IAGLLLEREQDKPSVY----VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC-SWI 731
           IA   LE +    + +     +L+ +Y AAG WE+AA +R+ ++     ++PG  SWI
Sbjct: 719 IAQSALELDWKNSASFAASMAMLAELYGAAGRWEDAARVRKAVESRNARREPGGRSWI 776



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 193/650 (29%), Positives = 324/650 (49%), Gaps = 61/650 (9%)

Query: 40  ALHLFVQIH------SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           A  L +Q H      SS  L+P  Y+  + L  C   ++AA G  +H + L +G     +
Sbjct: 5   ATELSLQTHINQLKKSSESLQPARYA--SLLQKCTEQKSAAAGKLVHQHILSSGCGVNRY 62

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N ++ +Y                                K G ++ A EVF+ +P+ +
Sbjct: 63  IQNHLIFMY-------------------------------AKCGCLEDALEVFELLPNPN 91

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
           +  + A+IT   + G+    +GLFR+M     + D + F++VL+ C  AG L  G+ +H 
Sbjct: 92  VFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHD 151

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
               +G    V V NA++ +Y  CG V +A  VFE       + +S+N ++   A  G  
Sbjct: 152 CAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPER--NLVSWNALIAANAQNGHC 208

Query: 273 EEALIRFRDM-LVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGFEAYTSVSN 327
           ++A+  F  M L  S+RP++ TFVSV+ AC      PR G   H + +++GF++Y  V N
Sbjct: 209 KDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPR-GKSTHERIIRTGFDSYLFVGN 267

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + + MY  CG +D A ++F ++  +++VSW  MI  YAQ+   R+A   Y  M      P
Sbjct: 268 SLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD---CEP 324

Query: 388 DEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  TF +++ S    E     E IHA +  +G  ++  +   L++ Y K   +  A+ IF
Sbjct: 325 NAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIF 384

Query: 445 HNMSPR--NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            N+  R  N +TWN +I+G   +G   Q L+ F ++ +  +RP+  T   +L +C+ ++ 
Sbjct: 385 ENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLND 444

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  G+Q+H  +L  N I + +L NA+I +Y KCG LD ++  F  M E+D +SWN +I+ 
Sbjct: 445 LTRGRQLHARILLEN-IHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIAT 503

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YAQHG G++A+  FK M D+     D+AT+   + AC     +  G  I   +      +
Sbjct: 504 YAQHGSGRQALEFFKQM-DLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCL 562

Query: 623 PAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             +  + + ++ +  R G L +A+ V    H +     W  L +ACA HG
Sbjct: 563 EQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLV-TWSNLIAACAQHG 611



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/570 (27%), Positives = 268/570 (47%), Gaps = 58/570 (10%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +AS+L  C +      G+ +H  +  SG      + N LI MY  CG + DA +VFE   
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---G 307
               +  S+  ++   A  G + E L  FR M +   +P    F +V++AC        G
Sbjct: 89  NP--NVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEG 146

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +H  A+ +G E    V NA + +Y  CG++ EA  +F RL E+++VSWN +I+  AQ 
Sbjct: 147 KAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQN 205

Query: 368 NLGRSAILAYLEMQSVG-IRPDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQV 423
              + A+  +  M   G +RP++ TF S++ A S  +++   +  H  +   G  + + V
Sbjct: 206 GHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFV 265

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N+L++ Y K   + +A  +F  MS RN+++W  +I  +   GF       +  +   + 
Sbjct: 266 GNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DC 322

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P+  T    + SC R   L   +QIH +++ +   S   L   ++T+Y KCG +D +  
Sbjct: 323 EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWS 382

Query: 544 VFNMMIEK--DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           +F  + E+  + ++WNA+IS  AQHGE K+A+ CF  M+  G ++P+  T+ A L ACS 
Sbjct: 383 IFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEG-VRPNSVTYLASLEACSS 441

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA--------ERVINS--- 650
              +  G ++   ++ +   I   +  + ++++ G+ G LDEA        ER + S   
Sbjct: 442 LNDLTRGRQLHARILLEN--IHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNT 499

Query: 651 ------QHIQARS----------DNW-------WALFSACAAHGNLRLGRIIAGLLLER- 686
                 QH   R           + W            AC +  +L LG+ I  ++    
Sbjct: 500 MIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAA 559

Query: 687 ---EQDKPSVYVLLSNIYAAAGLWEEAANI 713
              EQD P V   L  +YA  G   +A ++
Sbjct: 560 PCLEQD-PGVATALVTMYARCGSLHDAKSV 588



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 238/495 (48%), Gaps = 44/495 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  +++GH +DA+ +F  +     ++P+  +  + + AC+NL +   G   H
Sbjct: 192 LVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTH 251

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +R G  +Y  V N+++++Y     +   + VF ++ + +V SWT  + A  + G + 
Sbjct: 252 ERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIR 311

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A +++ +M                                  D   +  +F +V+  C 
Sbjct: 312 AAFDLYKRM----------------------------------DCEPNAVTFMAVMDSCL 337

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L    Q+H+ +  SGF     +   L+TMY  CG+V  A  +FE  K    + +++
Sbjct: 338 RPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTW 397

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
           N M+ GLA  G  ++AL  F  M +  +RP+ +T+++ + AC        G Q+HA+ + 
Sbjct: 398 NAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHARILL 457

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
                  ++SNA I MY  CG +DEA   FA++ E+D+VSWNTMI+TYAQ   GR A+  
Sbjct: 458 ENIHE-ANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGRQALEF 516

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFING--IITNIQVSNALISAY 431
           + +M   G   D  T+   + + G +  + +   IH+ V      +  +  V+ AL++ Y
Sbjct: 517 FKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMY 576

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A+   +  A  +F     RN++TW+ LI     +G   + L  F E+ +   +PD  T S
Sbjct: 577 ARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFS 636

Query: 492 VALSSCARISSLRHG 506
             +++C+R   ++ G
Sbjct: 637 TLVAACSRRGVVKDG 651



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 213/431 (49%), Gaps = 21/431 (4%)

Query: 286 SLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           SL+P+   + S++  C   +    G  VH   + SG      + N  I MY+ CG +++A
Sbjct: 23  SLQPAR--YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDA 80

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASS 399
             +F  L   ++ SW  +I+ YA+    R  +  + +MQ  G +PD F F ++L   +S+
Sbjct: 81  LEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSA 140

Query: 400 GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
           G +   + IH    + G+ T + V NA+++ Y K  R+ +A  +F  +  RN+++WN LI
Sbjct: 141 GALNEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALI 199

Query: 460 NGFLLNGFPVQGLQHFSEL-LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
                NG     +Q F  + L   +RP++ T    + +C+ +  L  GK  H  +++   
Sbjct: 200 AANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGF 259

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S + +GN+++ +Y KCG +D +  VF  M  ++ +SW  +I AYAQ G  + A   +K 
Sbjct: 260 DSYLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKR 319

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M      +P+  TF AV+ +C     +    +I   MV   GF        C++ + G+ 
Sbjct: 320 MD----CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVAS-GFDSDAVLQVCLVTMYGKC 374

Query: 639 GYLDEAERVINSQHIQARSDN---WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           G +D A  +   ++++ RS+N   W A+ S  A HG  +   +     +E E  +P+   
Sbjct: 375 GSVDSAWSIF--ENLKERSNNAVTWNAMISGLAQHGESKQA-LECFWKMELEGVRPNSVT 431

Query: 696 LLSNIYAAAGL 706
            L+++ A + L
Sbjct: 432 YLASLEACSSL 442



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 12/253 (4%)

Query: 474 HFSELLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           H ++L  S   L+P  Y  +  L  C    S   GK +H ++L +       + N +I +
Sbjct: 13  HINQLKKSSESLQPARY--ASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFM 70

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG L+ +L VF ++   +  SW ALI+AYA+ G  +E +  F+ MQ  G  KPD   
Sbjct: 71  YAKCGCLEDALEVFELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDG-TKPDAFV 129

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F+ VL+ACS AG +++G  I D  V     +  +   + +++L G+ G + EA+ V   +
Sbjct: 130 FSTVLTACSSAGALNEGKAIHDCAV--LAGMETQVVGNAIVNLYGKCGRVHEAKAVF--E 185

Query: 652 HIQARS-DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE-- 708
            +  R+  +W AL +A A +G+ +    +  L+      +P+    +S + A + L +  
Sbjct: 186 RLPERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLP 245

Query: 709 EAANIRELLKRTG 721
              +  E + RTG
Sbjct: 246 RGKSTHERIIRTG 258



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 7/166 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  ++ G  + AL  F Q+        D  +    + AC ++ + A G  +H
Sbjct: 494 VVSWNTMIATYAQHGSGRQALEFFKQM-DLEGWTTDRATYLGAIDACGSVPSLALGKTIH 552

Query: 81  AYALRAG--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +    A   L+  P VA  ++++Y     L   K VF    + ++ +W+  ++AC + G 
Sbjct: 553 SIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGR 612

Query: 139 VDYACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            + A ++F +M       D   ++ ++  C+  G    G+  F  M
Sbjct: 613 ENEALDLFREMQLQGTKPDALTFSTLVAACSRRGVVKDGVFYFVSM 658


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 216/741 (29%), Positives = 367/741 (49%), Gaps = 87/741 (11%)

Query: 11  AGNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AG+ + ++ LL ++        N  +A L+RS    +AL L+  +     L P  ++L++
Sbjct: 87  AGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLR-EGLVPTHFTLAS 145

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            L+AC  +     G + H  A++ GL     V N +L +Y                    
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMY-------------------- 185

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                      TK G V+ A  +FD M   +   + AM+ G  + G  D  + LF  M +
Sbjct: 186 -----------TKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCR 234

Query: 183 LDVRRDNYSFASVLSVC-DAGLLEF--------GRQLHSLVTKSGFSCLVSVVNALITMY 233
             VR D  + +SVL  C  A   EF        G+ +H+L+ + GF     V N+LI MY
Sbjct: 235 SGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMY 294

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C  + +A KVF+         +S+N+++ G    G   +AL     M  +   P+E+T
Sbjct: 295 TKCMQMDEAVKVFDSLPNI--STVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVT 352

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           + +++++C+  R                                 +  A  +F ++    
Sbjct: 353 YSNMLASCIKAR--------------------------------DVLSARAMFDKISRPS 380

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHA 410
           + +WNT++S Y Q  L +  +  +  MQ   ++PD  T   +L+S    G +++   +H+
Sbjct: 381 VTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHS 440

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                 +  ++ V++ L+  Y+K  +I  A  IF+ M+ R+++ WN++I+G  ++    +
Sbjct: 441 ASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEE 500

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
               F ++  + + P E + +  ++SCAR+SS+  G+QIH  ++K+     + +G+A+I 
Sbjct: 501 AFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALID 560

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG++D +   F+ M+ K+ ++WN +I  YAQ+G G++AV  F+ M    + +PD  
Sbjct: 561 MYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQ-RPDGV 619

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF AVL+ CSH+GLVD+    F+SM + YG  P  +H +C++D LGRAG L E E +I++
Sbjct: 620 TFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDN 679

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +     W  L +ACA H N  LG   A  L   +   PS YVLLSNIYA+ G   +A
Sbjct: 680 MPCKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDA 739

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           + +R L+   GV+K  G SWI
Sbjct: 740 SGVRALMSSRGVVKGRGYSWI 760



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 163/573 (28%), Positives = 277/573 (48%), Gaps = 48/573 (8%)

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L AGL A   + N ++ LY  +       R F  +  P+ YS+   LSA  + G +D A 
Sbjct: 35  LAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAAR 94

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
            + D+MPDR++  +N +I     +      + L+  M +  +   +++ ASVLS C A  
Sbjct: 95  ALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVA 154

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ GR+ H L  K G    + V NAL+ MY  CG V DA ++F+       + +S+  M
Sbjct: 155 ALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASP--NEVSFTAM 212

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCP---------RVGYQVH 311
           M GL   G V++AL  F  M  + +R   +   SV+ +C   C          R+G  +H
Sbjct: 213 MGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIH 272

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  ++ GF +   V N+ I MY+ C ++DEA  +F  L     VSWN +I+ + Q     
Sbjct: 273 ALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYA 332

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
            A+     M+  G  P+E T+ ++LAS                                 
Sbjct: 333 KALEVLNLMEESGSEPNEVTYSNMLASC-------------------------------- 360

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   +  A  +F  +S  ++ TWNTL++G+         ++ F  +    ++PD  TL+
Sbjct: 361 IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLA 420

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           V LSSC+R+  L  G Q+H   ++  L + M + + ++ +Y+KCG +  +  +FN M E+
Sbjct: 421 VILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTER 480

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D + WN++IS  A H   +EA   FK M+  G + P ++++ +++++C+    V  G +I
Sbjct: 481 DVVCWNSMISGLAIHSLNEEAFDFFKQMRGNG-MMPTESSYASMINSCARLSSVPQGRQI 539

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
              +V D G+       S ++D+  + G +D+A
Sbjct: 540 HAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDA 571



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 119/233 (51%), Gaps = 8/233 (3%)

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NA +SA  +   +  A  +   M  RN+++WNT+I     +    + L+ +  +L   L 
Sbjct: 78  NAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLV 137

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P  +TL+  LS+C  +++L  G++ HG  +K  L   + + NA++ +Y KCG ++ ++R+
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M   + +S+ A++    Q G   +A+  F  M   G ++ D    ++VL +C+ A  
Sbjct: 198 FDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSG-VRVDPVAVSSVLGSCAQACA 256

Query: 605 VD-DGTRIF------DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            + D  R F       +++   GF   +   + ++D+  +   +DEA +V +S
Sbjct: 257 SEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDS 309


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 324/607 (53%), Gaps = 13/607 (2%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G  D A  VFD M DR+   + A+I    +N      +GLF  M +     D ++  S
Sbjct: 94  RCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGS 153

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            +  C + G L  GRQ+H+   K      + V NAL+TMY   G+V D   +FE  +   
Sbjct: 154 AICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDK- 212

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSACLCP----RVGY 308
            D IS+  ++ GLA  GR  +AL  FR+M+   +  P+E  F SV  AC         G 
Sbjct: 213 -DLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGE 271

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+H  ++K   +  +    +   MY+ C ++D A  +F R++  D+VSWN++I+ ++ + 
Sbjct: 272 QIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKG 331

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSN 425
           L   A++ + EM+  G+RPD  T  +LL A  G+  +     IH+++   G+  ++ VSN
Sbjct: 332 LLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSN 391

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +L+S YA+      A  +FH    R+++TWN+++   + +       + FS L  S    
Sbjct: 392 SLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSL 451

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  +L+  LS+ A +      KQ+H Y  K  L+    L N +I  YAKCG LD + ++F
Sbjct: 452 DRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLF 511

Query: 546 NMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
            +M   +D  SW++LI  YAQ G  KEA+  F  M+++G +KP+  TF  VL+ACS  GL
Sbjct: 512 EIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLG-VKPNHVTFVGVLTACSRVGL 570

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           VD+G   +  M  +YG +P  +H SC+LDLL RAG L EA + ++    +     W  L 
Sbjct: 571 VDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLL 630

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           +A   H ++ +G+  A  +L  +    + YVLL NIYA++G W E A +++ ++ +GV K
Sbjct: 631 AASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQK 690

Query: 725 QPGCSWI 731
            PG SWI
Sbjct: 691 SPGKSWI 697


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/604 (31%), Positives = 324/604 (53%), Gaps = 12/604 (1%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFAS 194
           G++  A +VFDKMP RD+  + A+I G       D  + LF  M  +D  V  D    + 
Sbjct: 48  GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSV 107

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C  +  + +G  LH+   K+     V V ++L+ MY   G +  +C+VF E     
Sbjct: 108 VLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMP--F 165

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + +++  ++ GL   GR +E L  F +M  +       TF   + AC   R    G Q+
Sbjct: 166 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQI 225

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +  GF+A   V+N+  TMY+ CG++ +   +F  + E+D+VSW ++I  Y +    
Sbjct: 226 HTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHE 285

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A+  +++M++  + P+E TF ++ ++   +  +   E +H  VF  G+  ++ VSN++
Sbjct: 286 EKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSM 345

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+   ++  A  +F  M  R+II+W+T+I G+   GF  +  ++FS +  S  +P +
Sbjct: 346 MKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTD 405

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           + L+  LS    ++ L  G+Q+H       L    ++ + +I +Y+KCG++  + ++F  
Sbjct: 406 FALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEE 465

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
               D +S  A+I+ YA+HG+ KEA+  F+    VG   PD  TF +VL+AC+H+G +D 
Sbjct: 466 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FSPDSVTFISVLTACTHSGQLDL 524

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ M   Y   PA++H  CM+DLL RAG L EAE++I+    +     W  L  AC
Sbjct: 525 GFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIAC 584

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
            A G++  GR  A  +LE +    +  V L+NIY++ G  EEAAN+R+ +K  GVIK+PG
Sbjct: 585 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 644

Query: 728 CSWI 731
            S I
Sbjct: 645 WSSI 648



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 157/528 (29%), Positives = 254/528 (48%), Gaps = 48/528 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + PD   +S  L AC    N A+G  LHAYA++  L +   V +++L +YK         
Sbjct: 98  VSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYK--------- 148

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 ++G ++ +C VF +MP R+   + A+ITG    G    
Sbjct: 149 ----------------------RVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKE 186

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALI 230
           G+  F EM   +   D ++FA  L  C AGL  +++G+Q+H+ V   GF   V V N+L 
Sbjct: 187 GLTYFSEMSSSEELSDTFTFAIALKAC-AGLRQVKYGKQIHTHVIVRGFDATVWVANSLA 245

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TMY  CG + D   +FE       D +S+  ++     +G  E+A+  F  M  + + P+
Sbjct: 246 TMYTECGEMRDGLCLFENMSER--DVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPN 303

Query: 291 ELTFVSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E TF ++ SAC    R+  G Q+H      G     SVSN+ + MYS+CGK+D A ++F 
Sbjct: 304 EQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQ 363

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE- 406
            ++ +DI+SW+T+I  Y+Q   G  A   +  M+  G +P +F   SLL+ SG + ++E 
Sbjct: 364 GMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEG 423

Query: 407 --MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              +HA  F  G+  N  V + LI+ Y+K   IK+A +IF      +I++   +ING+  
Sbjct: 424 GRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAE 483

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL---KNNLISK 521
           +G   + +  F + L     PD  T    L++C     L  G   H + L   K N+   
Sbjct: 484 HGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLG--FHYFNLMQEKYNMRPA 541

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHGE 568
                 M+ L  + G L  + ++ + M  +KD + W  L+ A    G+
Sbjct: 542 KEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGD 589



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 223/490 (45%), Gaps = 60/490 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L  +G Y++ L  F ++ SS +L  D ++ +  L ACA LR   +G Q+H + +  G
Sbjct: 175 ITGLVHAGRYKEGLTYFSEMSSSEELS-DTFTFAIALKACAGLRQVKYGKQIHTHVIVRG 233

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             A   VAN++ ++Y    ++     +F  +   DV SWT+ + A  ++GH + A E F 
Sbjct: 234 FDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFI 293

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           KM +  +P                                +  +FA++ S C +   L +
Sbjct: 294 KMRNSQVP-------------------------------PNEQTFATMFSACASLSRLVW 322

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDG 265
           G QLH  V   G +  +SV N+++ MY  CG +  A  +F+   G  C D IS++ ++ G
Sbjct: 323 GEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQ---GMRCRDIISWSTIIGG 379

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
            +  G  EEA   F  M  +  +P++    S++S      V   G QVHA A   G E  
Sbjct: 380 YSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQN 439

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           ++V +  I MYS CG I EA  IF      DIVS   MI+ YA+    + AI  + +   
Sbjct: 440 STVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 499

Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAK 433
           VG  PD  TF S+L +   SG +++      F + N +     +  A      ++    +
Sbjct: 500 VGFSPDSVTFISVLTACTHSGQLDL-----GFHYFNLMQEKYNMRPAKEHYGCMVDLLCR 554

Query: 434 NERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
             R+ +A ++   MS  ++ + W TL+      G   +G +    +L  EL P   T + 
Sbjct: 555 AGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL--ELDP---TCAT 609

Query: 493 ALSSCARISS 502
           AL + A I S
Sbjct: 610 ALVTLANIYS 619



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 196/438 (44%), Gaps = 66/438 (15%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +R GH + A+  F+++ +S ++ P+  + +T  +ACA+L    +G QLH      GL   
Sbjct: 280 NRIGHEEKAVETFIKMRNS-QVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDS 338

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V+N+++ +Y     L S   +F  ++  D+ SW+T                       
Sbjct: 339 LSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWST----------------------- 375

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                   +I G ++ G+ +     F  M +   +  +++ AS+LSV  +  +LE GRQ+
Sbjct: 376 --------IIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV 427

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+L    G     +V + LI MY  CGN+ +A K+FEE      D +S   M++G A  G
Sbjct: 428 HALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRD--DIVSLTAMINGYAEHG 485

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA-- 328
           + +EA+  F   L     P  +TF+SV++AC         H+  +  GF  +  +     
Sbjct: 486 KSKEAIDLFEKSLKVGFSPDSVTFISVLTAC--------THSGQLDLGFHYFNLMQEKYN 537

Query: 329 ----------AITMYSSCGKIDEA-CMIFARLQEKDIVSWNT-MISTYAQRNL--GRSAI 374
                      + +    G++ EA  MI     +KD V W T +I+  A+ ++  GR A 
Sbjct: 538 MRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 597

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII-----TNIQVSNALIS 429
              LE+          T  ++ +S+G +E    +   +   G+I     ++I++ +  +S
Sbjct: 598 ERILELDPT-CATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDC-VS 655

Query: 430 AYAKNERIKQAYQIFHNM 447
           A+   +R     +  +N+
Sbjct: 656 AFVSGDRFHPLSEDIYNI 673


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 204/665 (30%), Positives = 354/665 (53%), Gaps = 15/665 (2%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           N + A  ++ G       +N  +  +    +L   +++F ++ + +  S    +S   K 
Sbjct: 37  NNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKS 96

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G++  A ++FD M +R    +  +I G ++         LF +M +     D  +F ++L
Sbjct: 97  GNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLL 156

Query: 197 SVCDAGLLEFGRQLHSLVT---KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           S C+    E G Q+  + T   K G+   + V N L+  Y     +  AC++F+E     
Sbjct: 157 SGCNGH--EMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPE-- 212

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D +SYN M+ G +  G  E+A+  F +M  + L+P+E TF +V+ A +      +G Q+
Sbjct: 213 IDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQI 272

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+  +K+ F     VSNA +  YS    + +A  +F  + E+D VS+N +IS YA     
Sbjct: 273 HSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKH 332

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNAL 427
           + A   + E+Q       +F F ++L+ +      EM   IHA   +    + I V N+L
Sbjct: 333 KYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSL 392

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK  + ++A  IF N++ R+ + W  +I+ ++  GF  +GLQ F+++  + +  D+
Sbjct: 393 VDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 452

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T +  L + A I+SL  GKQ+H +++K+  +S +  G+A++ +YAKCG +  +++ F  
Sbjct: 453 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M +++ +SWNA+ISAYAQ+GE +  +  FK M   G ++PD  +F  VLSACSH+GLV++
Sbjct: 513 MPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSG-LQPDSVSFLGVLSACSHSGLVEE 571

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+SM   Y   P  +H + ++D+L R+G  +EAE+++    I      W ++ +AC
Sbjct: 572 GLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 631

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
             H N  L R  A  L   E+ + +  YV +SNIYAAAG WE  + + + ++  GV K P
Sbjct: 632 RIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLP 691

Query: 727 GCSWI 731
             SW+
Sbjct: 692 AYSWV 696



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 178/386 (46%), Gaps = 41/386 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S+ G  + A++LFV++ +S  LKP  ++ +  L A   L +   G Q+H++ +
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNS-GLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVI 277

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +        V+N +L  Y     ++  +++F                             
Sbjct: 278 KTNFVWNVFVSNALLDFYSKHDSVIDARKLF----------------------------- 308

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
             D+MP++D   YN +I+G   +G       LFRE+      R  + FA++LS+    L 
Sbjct: 309 --DEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLD 366

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E GRQ+H+    +     + V N+L+ MY  CG   +A  +F          + +  M+
Sbjct: 367 WEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA--VPWTAMI 424

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
                 G  EE L  F  M  AS+   + TF S++ A        +G Q+H+  +KSGF 
Sbjct: 425 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 484

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +     +A + +Y+ CG I +A   F  + +++IVSWN MIS YAQ     + + ++ EM
Sbjct: 485 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 544

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIE 403
              G++PD  +F  +L++   SG +E
Sbjct: 545 VLSGLQPDSVSFLGVLSACSHSGLVE 570



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 177/410 (43%), Gaps = 59/410 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +  G ++ A  LF ++  +       +  +T L+  +N  +   G Q+HA  +
Sbjct: 320 NVIISGYAWDGKHKYAFDLFRELQFT-AFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 378

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
                +   V N+++ +Y         + +F+ + +     WT  +SA  + G       
Sbjct: 379 VTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGF------ 432

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                   YE+ G+ LF +M +  V  D  +FAS+L    +   
Sbjct: 433 ------------------------YEE-GLQLFNKMRQASVIADQATFASLLRASASIAS 467

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+QLHS + KSGF   V   +AL+ +Y  CG++ DA + F+E      + +S+N M+
Sbjct: 468 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR--NIVSWNAMI 525

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
              A  G  E  L  F++M+++ L+P  ++F+ V+SAC         H+  ++ G   + 
Sbjct: 526 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSAC--------SHSGLVEEGLWHFN 577

Query: 324 SVSN------------AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQR 367
           S++             + + M    G+ +EA  + A +  + D + W+++++    +  +
Sbjct: 578 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQ 637

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            L R A      M+ +          ++ A++G  E V  +H  +   G+
Sbjct: 638 ELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 687



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 36/237 (15%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           + +V  I A +   G   +   SN  +  + KN  + QA Q+F  M  +N ++ N +I+G
Sbjct: 33  LNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISG 92

Query: 462 FL--------------------------------LNGFPVQGLQHFSELLMSELRPDEYT 489
           ++                                LN F  +  + F ++      PD  T
Sbjct: 93  YVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFK-EAFELFVQMQRCGTEPDYVT 151

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               LS C          Q+   ++K    S++ +GN ++  Y K   LD + ++F  M 
Sbjct: 152 FVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP 211

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           E D++S+NA+I+ Y++ G  ++AV+ F  MQ+ G +KP + TF AVL  C++ GL D
Sbjct: 212 EIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG-LKPTEFTFAAVL--CANIGLDD 265


>gi|15233050|ref|NP_191676.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|6850884|emb|CAB71047.1| putative protein [Arabidopsis thaliana]
 gi|332646643|gb|AEE80164.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 783

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/665 (30%), Positives = 345/665 (51%), Gaps = 50/665 (7%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
           FG+ +H+YA R  L +     N +L     +  +   +++F ++   D ++W T + A +
Sbjct: 16  FGSCIHSYADRTKLHS-----NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYS 70

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
               +  A ++F   P ++   +NA+I+G  ++G +     LF EM    ++ + Y+  S
Sbjct: 71  NSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGS 130

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL +C +  LL  G Q+H    K+GF   V+VVN L+ MY  C  + +A  +FE  +G  
Sbjct: 131 VLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEK 190

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            +++++  M+ G +  G   +A+  FRD+     + ++ TF SV++AC      RVG QV
Sbjct: 191 -NNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +KSGF+    V +A I MY+ C +++ A  +   ++  D+VSWN+MI    ++ L 
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
             A+  +  M    ++ D+FT  S+L     S   +++    H  +   G  T   V+NA
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  YAK   +  A ++F  M  +++I+W  L+ G   NG   + L+ F  + +  + PD
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPD 429

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           +   +  LS+ A ++ L  G+Q+HG  +K+   S +S+ N+++T+Y KCG L+ +  +FN
Sbjct: 430 KIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFN 489

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D I+W  LI  YA++G                                    L++
Sbjct: 490 SMEIRDLITWTCLIVGYAKNG------------------------------------LLE 513

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           D  R FDSM   YG  P  +H +CM+DL GR+G   + E++++   ++  +  W A+ +A
Sbjct: 514 DAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAA 573

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
              HGN+  G   A  L+E E +    YV LSN+Y+AAG  +EAAN+R L+K   + K+P
Sbjct: 574 SRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEP 633

Query: 727 GCSWI 731
           GCSW+
Sbjct: 634 GCSWV 638



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 143/597 (23%), Positives = 265/597 (44%), Gaps = 80/597 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   +SG   +A +LF ++ S   +KP+ Y+L + L  C +L     G Q+H + +
Sbjct: 94  NALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTI 152

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +V N +L++Y                            + C ++   +Y  E
Sbjct: 153 KTGFDLDVNVVNGLLAMY----------------------------AQCKRISEAEYLFE 184

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
             +   +++   + +M+TG ++NG+    I  FR++ +   + + Y+F SVL+ C     
Sbjct: 185 TMEG--EKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G Q+H  + KSGF   + V +ALI MY  C  +  A  + E  +  V D +S+N M+
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME--VDDVVSWNSMI 300

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV----HAQAMKSGF 319
            G    G + EAL  F  M    ++  + T  S+++     R   ++    H   +K+G+
Sbjct: 301 VGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGY 360

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
             Y  V+NA + MY+  G +D A  +F  + EKD++SW  +++          A+  +  
Sbjct: 361 ATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCN 420

Query: 380 MQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  GI PD+    S+L++S     +E  + +H     +G  +++ V+N+L++ Y K   
Sbjct: 421 MRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGS 480

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A  IF++M  R++ITW  LI G+  NG      ++F                    S
Sbjct: 481 LEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYF-------------------DS 521

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD-LDCSLRVFNMMIEKDTIS 555
              +  +  G + +                 MI L+ + GD +     +  M +E D   
Sbjct: 522 MRTVYGITPGPEHYA---------------CMIDLFGRSGDFVKVEQLLHQMEVEPDATV 566

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
           W A+++A  +HG  +      K + +   ++P+ A     LS   S AG  D+   +
Sbjct: 567 WKAILAASRKHGNIENGERAAKTLME---LEPNNAVPYVQLSNMYSAAGRQDEAANV 620


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 205/605 (33%), Positives = 324/605 (53%), Gaps = 14/605 (2%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFAS 194
           +G + +A   FD++  +D+  +N+MI+     G+    +  F E      ++ D+Y+F  
Sbjct: 88  LGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPP 147

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           V+  C  G L+ GR++H LV K GF C V +  + I  Y   G V  AC +F+     + 
Sbjct: 148 VIRAC--GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMM--IR 203

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           D  ++N M+ G    G+V EAL  F +M   S+    +T  S++  C+       G  +H
Sbjct: 204 DIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIH 263

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A+K G E    V NA I MY+  G++  A  IF +++ +DIVSWN++++ + Q     
Sbjct: 264 VYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPV 323

Query: 372 SAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFIN-GIITNIQVSNAL 427
            A+  Y +M S+G+ PD  T     S+ A  G       IH FV      + +I + NA+
Sbjct: 324 IALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAI 383

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPD 486
           I  YAK   I  A ++F  +  +++I+WN+LI G+  NG   + +  +S +   S   P+
Sbjct: 384 IDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPN 443

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           + T    L++ +++ +L+ G + HG ++KN L   + +   ++ +Y KCG L  +L +F 
Sbjct: 444 QGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFY 503

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            +  + ++SWNA+IS +  HG G +AV  FK MQ  G +KPD  TF ++LSACSH+GLVD
Sbjct: 504 EVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEG-VKPDHITFVSLLSACSHSGLVD 562

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F  M   YG  P+  H  CM+DL GRAG+L++A   + +  ++     W AL  A
Sbjct: 563 EGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGA 622

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ L R ++  LL+ E +    YVLLSNIYA  G WE    +R L +  G+ K P
Sbjct: 623 CRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTP 682

Query: 727 GCSWI 731
           G S I
Sbjct: 683 GWSSI 687



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 267/535 (49%), Gaps = 14/535 (2%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +   +QLH+L+  SG +  + +   LI  Y   G++  A   F++ +    D  ++N M+
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ--TKDVYTWNSMI 113

Query: 264 DGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
              A +G    A+  F + L  S L+    TF  V+ AC     G +VH   +K GFE  
Sbjct: 114 SAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFECD 173

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             ++ + I  YS  G +  AC +F  +  +DI +WN MIS +        A+  + EM+ 
Sbjct: 174 VYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRF 233

Query: 383 VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             +  D  T  SLL     ++ +    +IH +    G+  ++ V NALI+ YAK   ++ 
Sbjct: 234 KSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRS 293

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  IF+ M  R+I++WN+L+  F  N  PV  L  ++++    + PD  TL    S  A 
Sbjct: 294 AETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAE 353

Query: 500 ISSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           + +    + IHG+V +    +  ++LGNA+I +YAK G +D + +VF  +  KD ISWN+
Sbjct: 354 LGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNS 413

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LI+ Y+Q+G   EA+  + +M+      P+Q T+ ++L+A S  G +  G +    ++ +
Sbjct: 414 LITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKN 473

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG-NLRLGR 677
           + +       +C++D+ G+ G L +A  +      Q+ S +W A+ S    HG  L+  +
Sbjct: 474 FLYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQS-SVSWNAIISCHGLHGYGLKAVK 531

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT-GV---IKQPGC 728
           +   +  E  +     +V L +  + +GL +E     +L++ T G+   +K  GC
Sbjct: 532 LFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGC 586



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 255/556 (45%), Gaps = 53/556 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +R GH+  A+  F +  S+  L+ D Y+    + AC NL +   G ++H   L
Sbjct: 110 NSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVL 166

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +                                DVY   +F+   ++ G V  AC 
Sbjct: 167 KLGFEC-------------------------------DVYIAASFIHFYSRFGFVSLACN 195

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD M  RD+  +NAMI+G   NG     + +F EM    V  D+ + +S+L +C     
Sbjct: 196 LFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDD 255

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G  +H    K G    + V NALI MY   G +  A  +F + K  V D +S+N ++
Sbjct: 256 IISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMK--VRDIVSWNSLL 313

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM------KS 317
                  +   AL  +  M    + P  LT VS+  A +   +G  + ++++      + 
Sbjct: 314 AAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSL--ASVAAELGNFLSSRSIHGFVTRRC 371

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
            F    ++ NA I MY+  G ID A  +F  L  KD++SWN++I+ Y+Q  L   AI  Y
Sbjct: 372 WFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVY 431

Query: 378 LEMQSV-GIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
             M+   G  P++ T+ S+L +    G ++     H  +  N +  +I VS  L+  Y K
Sbjct: 432 SSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGK 491

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             ++  A  +F+ +  ++ ++WN +I+   L+G+ ++ ++ F E+    ++PD  T    
Sbjct: 492 CGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSL 551

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLR-VFNMMIE 550
           LS+C+  S L    Q    +++     + SL +   M+ L+ + G L+ +   V NM + 
Sbjct: 552 LSACSH-SGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVR 610

Query: 551 KDTISWNALISAYAQH 566
            D   W AL+ A   H
Sbjct: 611 PDVSVWGALLGACRIH 626



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 178/359 (49%), Gaps = 2/359 (0%)

Query: 291 ELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           E+ F  +   C    +  Q+HA  + SG      +S   I  Y+  G I  A + F ++Q
Sbjct: 43  EIDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIEMVEMIH 409
            KD+ +WN+MIS YA+     +A+  + E  S   ++ D +TF  ++ + G ++    +H
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVH 162

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
             V   G   ++ ++ + I  Y++   +  A  +F NM  R+I TWN +I+GF LNG   
Sbjct: 163 CLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVA 222

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L+ F E+    +  D  T+S  L  C ++  +  G  IH Y +K  L   + + NA+I
Sbjct: 223 EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALI 282

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAK G+L  +  +FN M  +D +SWN+L++A+ Q+ +   A+  +  M  +G + PD 
Sbjct: 283 NMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIG-VVPDL 341

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            T  ++ S  +  G       I   +     F+      + ++D+  + G++D A +V 
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVF 400



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 130/287 (45%), Gaps = 12/287 (4%)

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           SA  A   +  V     E  F  +      + + + +HA + ++G   +I +S  LI+ Y
Sbjct: 26  SATAAPKYLDGVENEKREIDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRY 85

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTL 490
           A    I  A   F  +  +++ TWN++I+ +   G     +  F+E L  S L+ D YT 
Sbjct: 86  AFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTF 145

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              + +C    +L  G+++H  VLK      + +  + I  Y++ G +  +  +F+ M+ 
Sbjct: 146 PPVIRACG---NLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMI 202

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D  +WNA+IS +  +G+  EA+  F  M+    +  D  T +++L  C     +  G  
Sbjct: 203 RDIGTWNAMISGFYLNGKVAEALEVFDEMR-FKSVSMDSVTISSLLPICVQLDDIISGVL 261

Query: 611 IFDSMVNDYGFIPAE-DHLSC--MLDLLGRAGYLDEAERVINSQHIQ 654
           I    +     +  E D   C  ++++  + G L  AE + N   ++
Sbjct: 262 IHVYAIK----LGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR 304


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 226/708 (31%), Positives = 355/708 (50%), Gaps = 48/708 (6%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL-KAYPH 93
           G Y++A+ L V+      L+P+  ++   L AC        G  +H Y LR G+  + PH
Sbjct: 133 GCYEEAM-LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VA  ++  Y     L    RV   +                           FD M  R+
Sbjct: 192 VATALIGFY-----LRFDMRVLPLL---------------------------FDLMVVRN 219

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
           +  +NAMI+G  + G     + LF +M   +V+ D  +    +  C + G L+ G+Q+H 
Sbjct: 220 IVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQ 279

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L  K  F   + ++NAL+ MY N G++  + ++FE       D   +N M+   A+ G  
Sbjct: 280 LAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR--DAPLWNSMISAYAAFGCH 337

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV--GYQVHAQAMKSGFEAYTSVSNA 328
           EEA+  F  M    ++  E T V ++S C  L   +  G  +HA  +KSG     S+ NA
Sbjct: 338 EEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNA 397

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            ++MY+    ++    IF R++  DI+SWNTMI   A+  L   A   +  M+   I+P+
Sbjct: 398 LLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPN 457

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            +T  S+LA+   +  ++    IH +V  + I  N  +  AL   Y        A  +F 
Sbjct: 458 SYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE 517

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               R++I+WN +I  ++ N    + L  F  ++ SE  P+  T+   LSS   +++L  
Sbjct: 518 GCPDRDLISWNAMIASYVKNNQAHKALLLFHRMI-SEAEPNSVTIINVLSSFTHLATLPQ 576

Query: 506 GKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           G+ +H YV +   +L   +SL NA IT+YA+CG L  +  +F  + +++ ISWNA+I+ Y
Sbjct: 577 GQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGY 636

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +G G +A+  F  M + G  +P+  TF +VLSACSH+G ++ G ++F SMV D+   P
Sbjct: 637 GMNGRGSDAMLAFSQMLEDG-FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTP 695

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
              H SC++DLL R G +DEA   I+S  I+  +  W AL S+C A+ + +  + I   L
Sbjct: 696 ELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 755

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + E      YVLLSN+YA AGLW E   IR  LK  G+ K PG SWI
Sbjct: 756 DKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 803



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 175/603 (29%), Positives = 291/603 (48%), Gaps = 31/603 (5%)

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNA----RDLVSVKRVFSEIQNPD- 122
           ANL+N      L AY     L   P+  NT L L   A      +   K +   IQ  D 
Sbjct: 29  ANLKNDQ--AILSAYTQMESLGVLPN--NTTLPLVLKACAAQNAVERGKSIHRSIQGTDL 84

Query: 123 ---VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
              V   T  +    K G V+ A  VFD M DRD+ ++NAM+ G    G  +  + L RE
Sbjct: 85  MDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVRE 144

Query: 180 MHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCG 237
           M + ++R ++ +  ++L  C+ A  L  GR +H    ++G F     V  ALI  Y    
Sbjct: 145 MGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD 204

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             V    +F+     V + +S+N M+ G   VG   +AL  F  MLV  ++   +T +  
Sbjct: 205 MRVLPL-LFDLM--VVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVA 261

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + AC      ++G Q+H  A+K  F     + NA + MYS+ G ++ +  +F  +  +D 
Sbjct: 262 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 321

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA-----SSGFIEMVEMIH 409
             WN+MIS YA       A+  ++ MQS G++ DE T   +L+     +SG ++  + +H
Sbjct: 322 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKG-KSLH 380

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A V  +G+  +  + NAL+S Y +   ++   +IF  M   +II+WNT+I     N    
Sbjct: 381 AHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRA 440

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           Q  + F  +  SE++P+ YT+   L++C  ++ L  G+ IHGYV+K+++     L  A+ 
Sbjct: 441 QACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALA 500

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y  CGD   +  +F    ++D ISWNA+I++Y ++ +  +A+  F  M  +   +P+ 
Sbjct: 501 DMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM--ISEAEPNS 558

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED--HLSCMLDLLGRAGYLDEAERV 647
            T   VLS+ +H   +  G  +  + V   GF    D    +  + +  R G L  AE +
Sbjct: 559 VTIINVLSSFTHLATLPQGQSLH-AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENI 617

Query: 648 INS 650
             +
Sbjct: 618 FKT 620



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 153/599 (25%), Positives = 263/599 (43%), Gaps = 105/599 (17%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF-GNQLHAYALRAGLKAYPH 93
           G +++A+ LF+++ S   +K D  ++   L+ C  L +    G  LHA+ +++G++    
Sbjct: 335 GCHEEAMDLFIRMQS-EGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 393

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N +LS+Y     + SV+++F  ++  D+ SW T + A  +      ACE+F++M +  
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRES- 452

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                                         +++ ++Y+  S+L+ C D   L+FGR +H 
Sbjct: 453 ------------------------------EIKPNSYTIISILAACEDVTCLDFGRSIHG 482

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            V K        +  AL  MY NCG+   A  +FE       D IS+N M+       + 
Sbjct: 483 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR--DLISWNAMIASYVKNNQA 540

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSA----CLCPRVGYQVHAQAMKSGFE--AYTSVS 326
            +AL+ F  M ++   P+ +T ++V+S+       P+ G  +HA   + GF      S++
Sbjct: 541 HKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQ-GQSLHAYVTRRGFSLGLDLSLA 598

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ITMY+ CG +  A  IF  L +++I+SWN MI+ Y     G  A+LA+ +M   G R
Sbjct: 599 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 658

Query: 387 PDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  TF S+L++   SGFIEM +++ H+ V    +   +   + ++   A+   I +A +
Sbjct: 659 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE 718

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
              +M                    P++              PD       LSSC   S 
Sbjct: 719 FIDSM--------------------PIE--------------PDASVWRALLSSCRAYSD 744

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMI--TLYAKCGDLDCSLRVFNMMIEK-----DTIS 555
            +  K I   + K   +  M+ GN ++   +YA  G      R+   + EK       IS
Sbjct: 745 AKQAKTIFEKLDK---LEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGIS 801

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ--ATFTAVLSACSHAGLVDDGTRIF 612
           W  +          K  V CF A  D    + D+  A  + +LS+    G   D   +F
Sbjct: 802 WIIV----------KNQVHCFSA-GDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVF 849



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 21/382 (5%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           D   +N ++   A++   +  L  +  M    + P+  T   V+ AC        G  +H
Sbjct: 17  DPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIH 76

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                +       V  A +  Y  CG +++A  +F  + ++D+V WN M+  Y       
Sbjct: 77  RSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE 136

Query: 372 SAILAYLEMQSVGIRPDEFTFGS-LLASSGFIEMV--EMIHAFVFINGII-TNIQVSNAL 427
            A+L   EM    +RP+  T  + LLA  G  E+     +H +   NG+  +N  V+ AL
Sbjct: 137 EAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATAL 196

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y + + ++    +F  M  RNI++WN +I+G+   G   + L+ F ++L+ E++ D 
Sbjct: 197 IGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDC 255

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+ VA+ +CA + SL+ GKQIH   +K   +  + + NA++ +Y+  G L+ S ++F  
Sbjct: 256 VTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFES 315

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS------- 600
           +  +D   WN++ISAYA  G  +EA+  F  MQ  G +K D+ T   +LS C        
Sbjct: 316 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG-VKKDERTVVIMLSMCEELASGLL 374

Query: 601 -----HAGLVDDGTRIFDSMVN 617
                HA ++  G RI  S+ N
Sbjct: 375 KGKSLHAHVIKSGMRIDASLGN 396



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 166/329 (50%), Gaps = 10/329 (3%)

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
           ++Q KD   WN++I   A     ++ + AY +M+S+G+ P+  T   +L   A+   +E 
Sbjct: 12  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 71

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + IH  +    ++ +++V  A++  Y K   ++ A  +F  MS R+++ WN ++ G++ 
Sbjct: 72  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI-SKMS 523
            G   + +    E+    LRP+  T+   L +C   S LR G+ +HGY L+N +  S   
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +  A+I  Y +  D+     +F++M+ ++ +SWNA+IS Y   G+  +A+  F  M  V 
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VD 249

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            +K D  T    + AC+  G +  G +I    +  + F+     L+ +L++    G L+ 
Sbjct: 250 EVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK-FEFVEDLYILNALLNMYSNNGSLES 308

Query: 644 AERVINSQHIQARSDNWW-ALFSACAAHG 671
           + ++  S  +  R    W ++ SA AA G
Sbjct: 309 SHQLFES--VPNRDAPLWNSMISAYAAFG 335


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 376/746 (50%), Gaps = 98/746 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           + + N+ +  L +SG   +A+ +F   H +HK      S+ +  A    + +A    QL 
Sbjct: 15  VFRHNLKITQLGKSGQIDEAIKVFQ--HMTHKNTVTHNSMISAFAKNGRISDA---RQLF 69

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV- 139
               +  + ++    N++++ Y +   +   +++F ++   D+YSWT  ++  T+ G + 
Sbjct: 70  DGMPQRNIVSW----NSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELA 125

Query: 140 -------------------------------DYACEVFDKMPDRDLPVYNAMITGCTENG 168
                                          D A  +FD MP +DL  +N+M+TG T NG
Sbjct: 126 KARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNG 185

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVN 227
              +G+  F EM + DV   N      + V D     EF  ++ +  T S  + L     
Sbjct: 186 EMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCG--- 242

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
                +   G + +A ++F++    + + +++N M+        V+EA+  F +M     
Sbjct: 243 -----FARFGKIAEARRLFDQMP--IRNVVAWNAMIAAYVQNCHVDEAISLFMEMP---- 291

Query: 288 RPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS--NAAITMYSSCGKIDEACMI 345
             + +++ +V++  +  R+G    A+ + +    Y +V+   A I+ Y    ++D+A  I
Sbjct: 292 EKNSISWTTVINGYV--RMGKLDEARQLLNQM-PYRNVAAQTAMISGYVQNKRMDDARQI 348

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F ++  +D+V WNTMI+ Y+Q   GR                                M 
Sbjct: 349 FNQISIRDVVCWNTMIAGYSQ--CGR--------------------------------MD 374

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  +F   +  +I   N ++++YA+  ++  A +IF  M  +NI++WN+LI+G   N
Sbjct: 375 EALH--LFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQN 432

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G  +  L+ F  +     +PD+ T +  LSSCA +++L+ GKQ+H  V+K+   + + + 
Sbjct: 433 GSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVS 492

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           NA+IT+YAKCG +  +  +F  +   D +SWN+LI+AYA +G G+EA+  F  M+  G +
Sbjct: 493 NALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEG-V 551

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            PD+ TF  +LSACSH GL+D G ++F  MV  Y   P  +H +CM+DLLGRAG L+EA 
Sbjct: 552 APDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAF 611

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +++    I A +  W AL  AC  HGNL L +  A  LLE E  K S YVLLSN+ A AG
Sbjct: 612 QLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAG 671

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E A +R L+K  G  KQPG SWI
Sbjct: 672 RWDEVARVRRLMKEKGAEKQPGWSWI 697



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 190/432 (43%), Gaps = 53/432 (12%)

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--------------- 365
           +Y    N  IT     G+IDEA  +F  +  K+ V+ N+MIS +A               
Sbjct: 13  SYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGM 72

Query: 366 -QRNL--GRSAILAYLE-------MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN 415
            QRN+    S I AYL         Q     P    +   L  + +    E+  A    N
Sbjct: 73  PQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFN 132

Query: 416 GII--TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +    N    NA+++ YAKN +  +A ++F  M  +++++WN+++ G+  NG    GLQ
Sbjct: 133 LLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQ 192

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F E  M+E   D  + ++ +     +  L    +    +   N +S ++    M+  +A
Sbjct: 193 FFEE--MAE--RDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVT----MLCGFA 244

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           + G +  + R+F+ M  ++ ++WNA+I+AY Q+    EA+S F  M +   I     ++T
Sbjct: 245 RFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSI-----SWT 299

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            V++     G +D+  ++ + M   Y  + A+   + M+    +   +D+A ++ N   I
Sbjct: 300 TVINGYVRMGKLDEARQLLNQM--PYRNVAAQ---TAMISGYVQNKRMDDARQIFN--QI 352

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV--YVLLSNIYAAAGLWEEAA 711
             R    W    A    G  + GR+   L L ++  K  +  +  +   YA  G  + A 
Sbjct: 353 SIRDVVCWNTMIA----GYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAI 408

Query: 712 NIRELLKRTGVI 723
            I E +K   ++
Sbjct: 409 KIFEEMKEKNIV 420


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 196/621 (31%), Positives = 325/621 (52%), Gaps = 11/621 (1%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P++    + L    K+G +  A ++F+KM  RD   +  +I G       +  + LF  M
Sbjct: 82  PNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM 141

Query: 181 H-KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                +++D +  +  L  C  G+ + FG  LH    KSG    V V +AL+ MY   G 
Sbjct: 142 WVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGK 201

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
               C VFE       + +S+  ++ GL   G   + L  F +M  + +     TF   +
Sbjct: 202 TEQGCSVFENMT--TRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVAL 259

Query: 299 SACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
            A     +   G  +HAQ +K GF     V N   TMYS C K D    +F ++   D+V
Sbjct: 260 KASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVV 319

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFV 412
           SW  +I TY Q      A+ A+  M+   + P+E+TF S++++   + +    E IH   
Sbjct: 320 SWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHA 379

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G++  + VSN++I+ Y+K   +++A  +F  M+ ++II+W+T+I+ +       +  
Sbjct: 380 LRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAF 439

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
            + S +     +P+E+ L+  LS C  ++ L  GKQ+H Y L   L  +  + +A+I++Y
Sbjct: 440 NYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMY 499

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           ++ G+L  + ++F+ +   D +SW A+I+ YA+HG  +EA+S F+ +  VG + PD  TF
Sbjct: 500 SRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVG-LMPDYVTF 558

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             +L+AC+HAGLVD G   +  M N+Y   P+++H  C++DLL RAG L EAE ++ +  
Sbjct: 559 IGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMP 618

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
                  W  L  AC  HG+L      A  +L    +    ++ L+NIY+A+G  EEAA+
Sbjct: 619 FPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAH 678

Query: 713 IRELLKRTGVIKQPGCSWIGS 733
           +R+L+K  GVIK+PG SWI S
Sbjct: 679 VRKLMKSKGVIKEPGWSWINS 699



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 164/575 (28%), Positives = 274/575 (47%), Gaps = 51/575 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A    + +  +AL LF  +     L+ D + +S  L ACA   N  FG  LH +++++G
Sbjct: 122 IAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSG 181

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V++ ++ +Y                                K+G  +  C VF+
Sbjct: 182 LINSVFVSSALVDMY-------------------------------MKVGKTEQGCSVFE 210

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
            M  R++  + A+I G    G    G+  F EM +  V  D+++FA  L    ++GLL +
Sbjct: 211 NMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHY 270

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +H+   K GF+    VVN L TMY  C       ++F   K    D +S+  ++   
Sbjct: 271 GKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLF--GKMSTPDVVSWTNLIMTY 328

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
             +G  E AL  F+ M  + + P+E TF SV+SAC      + G Q+H  A++ G     
Sbjct: 329 VQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDAL 388

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SVSN+ IT+YS CG + EA ++F  +  KDI+SW+T+IS Y Q +  + A      M   
Sbjct: 389 SVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSRE 448

Query: 384 GIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G +P+EF   S+L+  G + ++E    +HA+    G+     V +ALIS Y+++  +++A
Sbjct: 449 GPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEA 508

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +IF ++   +I++W  +ING+  +G+  + +  F  +    L PD  T    L++C   
Sbjct: 509 SKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHA 568

Query: 501 SSLRHGKQIHGYVLKNN----LISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTIS 555
             +  G   + Y L  N      SK   G  +I L  + G L +    V NM    D + 
Sbjct: 569 GLVDLG--FYYYKLMTNEYQIAPSKEHYG-CIIDLLCRAGRLSEAEHMVRNMPFPCDDVV 625

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           W+ L+ A   HG+   A+    A + + R+ P+ A
Sbjct: 626 WSTLLRACRDHGDLDRAI---WAAEQMLRLHPNSA 657



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/385 (21%), Positives = 153/385 (39%), Gaps = 95/385 (24%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           +  H ++A + ++   S    KP+ ++L++ L+ C ++     G Q+HAYAL  GL    
Sbjct: 431 QGSHAKEAFN-YLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHET 489

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V + ++S+Y  + +L    ++F  I+N D+ SWT                         
Sbjct: 490 MVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWT------------------------- 524

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
                 AMI G  E+GY    I LF  +  + +  D  +F  +L+ C+ AGL++ G   +
Sbjct: 525 ------AMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYY 578

Query: 212 SLVT--------KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            L+T        K  + C       +I +    G + +A  +      + CD + ++ ++
Sbjct: 579 KLMTNEYQIAPSKEHYGC-------IIDLLCRAGRLSEAEHMVRNMP-FPCDDVVWSTLL 630

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
                 G ++ A+     ML   L P+                              A+ 
Sbjct: 631 RACRDHGDLDRAIWAAEQML--RLHPNSAG---------------------------AHI 661

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIV-----SW-------NTMISTYAQRNLGR 371
           +++N    +YS+ G+ +EA  +   ++ K ++     SW       NT ++      L +
Sbjct: 662 TLAN----IYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSK 717

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL 396
             I   LE+    I      FGS++
Sbjct: 718 Q-ITTILELLRTSIGDARLDFGSIV 741


>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 185/541 (34%), Positives = 306/541 (56%), Gaps = 15/541 (2%)

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G L  G+QLH+ V K G   L+S+ N ++ +Y  C    D CK+F+E    + + +S+N 
Sbjct: 87  GFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMP--LKNVVSWNT 144

Query: 262 MMDGLASVGRVEEALIR-----FRDMLVASLRPSELTFVSVMSACL-CPRVGY--QVHAQ 313
           ++ G+   G  + AL+R     FR M++  + P+ +T   ++ A +    VG   Q+H  
Sbjct: 145 LICGVVE-GNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +KSGF++   V +A +  Y+  G +DEA   F  +  +D+V WN M+S YA   +   A
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISA 430
              +  M+  G++ D FTF S++ S G +    + + +H  +       ++ V++AL+  
Sbjct: 264 FGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDM 323

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+KNE I+ A + F  M  +NI++W T+I G+  +G   + ++   E++     PDE  L
Sbjct: 324 YSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPDELAL 383

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LSSC  +S+     Q+H YV++N   + +S+ NA+++ Y+KCG +  + + F+ + E
Sbjct: 384 ASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAE 443

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            D ISW +L+ AYA HG  KE V  F+ M     ++PD+  F  VLSAC+H G V +G  
Sbjct: 444 PDIISWTSLMGAYAFHGLSKEGVEVFEKML-FSNVRPDKVAFLGVLSACAHGGFVLEGLH 502

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            F+ M+N Y  +P  +H +C++DLLGRAG+LDEA  ++ S  ++ RSD   A   AC  H
Sbjct: 503 YFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGACKVH 562

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ L R  +  L   E ++P+ Y L+SN+YA+ G W + A +R+L++     K PGCSW
Sbjct: 563 RNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSW 622

Query: 731 I 731
           +
Sbjct: 623 M 623



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 44/367 (11%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + P+  +L+  L A   L +     QLH + L++G  +   V + ++  Y          
Sbjct: 174 MAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSY---------- 223

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 K G VD A   FD++  RDL ++N M++    NG +  
Sbjct: 224 ---------------------AKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGK 262

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
             G+F+ M    V+ DN++F S+++ C   G    G+Q+H L+ +  F   V V +AL+ 
Sbjct: 263 AFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVD 322

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           MY    N+ DA K F+   G +  +I S+  M+ G    G  +EA+   ++M+     P 
Sbjct: 323 MYSKNENIEDARKAFD---GMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPD 379

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           EL   S++S+C          QVHA  +++GFEA+ S++NA ++ YS CG I  A   F+
Sbjct: 380 ELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFS 439

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            + E DI+SW +++  YA   L +  +  + +M    +RPD+  F  +L   A  GF+  
Sbjct: 440 SVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFV-- 497

Query: 405 VEMIHAF 411
           +E +H F
Sbjct: 498 LEGLHYF 504



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 137/283 (48%), Gaps = 13/283 (4%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A  GF+   + +HA V   G    + + N ++  Y K +      ++F  M  +N+++WN
Sbjct: 84  AKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWN 143

Query: 457 TLINGFLLNGFPVQ----GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           TLI G +           G  +F ++++  + P+  TL+  L +   ++ +   +Q+H +
Sbjct: 144 TLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           +LK+   S   +G+A++  YAK G +D +   F+ +  +D + WN ++S YA +G   +A
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN---DYGFIPAEDHLS 629
              FK M+  G +K D  TFT+++++C   G    G ++   ++    D   + A    S
Sbjct: 264 FGVFKLMRLEG-VKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVA----S 318

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            ++D+  +   +++A +  +   I     +W  +      HG+
Sbjct: 319 ALVDMYSKNENIEDARKAFDGM-IVKNIVSWTTMIVGYGQHGD 360



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 8/132 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD  +L++ L++C NL   +   Q+HAY +  G +A+  +AN ++S Y     + S  + 
Sbjct: 378 PDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDRDLPVYNAMITGCTENG 168
           FS +  PD+ SWT+ + A    G      EVF+KM      PD+    +  +++ C   G
Sbjct: 438 FSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDK--VAFLGVLSACAHGG 495

Query: 169 YEDIGIGLFREM 180
           +   G+  F  M
Sbjct: 496 FVLEGLHYFNLM 507



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 12/185 (6%)

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S AL   A++  L  GKQ+H +V+K    + +SL N ++ +Y KC + +   ++F+ M  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 551 KDTISWNALISAYAQHGEGKEAV-----SCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           K+ +SWN LI    + G  K A+       F+ M  +  + P+  T   +L A     L 
Sbjct: 137 KNVVSWNTLICGVVE-GNCKFALVRLGFHYFRQMV-LEMMAPNCITLNGLLRASIE--LN 192

Query: 606 DDGT-RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           D G  R     +   GF       S ++D   + G +DEA+   +   + +R    W + 
Sbjct: 193 DVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD--EVSSRDLVLWNVM 250

Query: 665 SACAA 669
            +C A
Sbjct: 251 VSCYA 255


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 219/718 (30%), Positives = 363/718 (50%), Gaps = 35/718 (4%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N +++    +G +  A+ LF ++ S       +  LS  L ACA L     G  +H 
Sbjct: 265 ISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSV-LPACAELGFELVGKVVHG 323

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           Y++++GL            L+    DL SV+    E     +     F+    K G +  
Sbjct: 324 YSMKSGL------------LW----DLESVQSGIDEALGSKL----VFMY--VKCGDMGS 361

Query: 142 ACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VC 199
           A  VFD MP + ++ V+N ++ G  +    +  + LF +MH+L +  D ++ + +L  + 
Sbjct: 362 ARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCIT 421

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
                  G   H  + K GF    +V NALI+ Y     + +A  VF+       D IS+
Sbjct: 422 CLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQ--DTISW 479

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
           N ++ G  S G   EA+  F  M +        T +SV+ AC       VG  VH  ++K
Sbjct: 480 NSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVK 539

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G    TS++NA + MYS+C        IF  + +K++VSW  MI++Y +  L       
Sbjct: 540 TGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL 599

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
             EM   GI+PD F   S+L   A    ++  + +H +   NG+   + V+NAL+  Y  
Sbjct: 600 LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVN 659

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +++A  +F +++ ++II+WNTLI G+  N F  +    FS++L+ + +P+  T++  
Sbjct: 660 CRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCI 718

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + A ISSL  G++IH Y L+   +      NA++ +Y KCG L  +  +F+ + +K+ 
Sbjct: 719 LPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNL 778

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           ISW  +I+ Y  HG GK+AV+ F+ M+  G ++PD A+F+A+L AC H+GL  +G + F+
Sbjct: 779 ISWTIMIAGYGMHGCGKDAVALFEQMRGSG-VEPDTASFSAILYACCHSGLTAEGWKFFN 837

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +M  +Y   P   H +C++DLL   G L EA   I S  I+  S  W +L   C  H ++
Sbjct: 838 AMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDV 897

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +L   +A  + + E +    YVLL+NIYA A  WE    ++  +   G+ +  GCSWI
Sbjct: 898 KLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWI 955



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 174/654 (26%), Positives = 308/654 (47%), Gaps = 49/654 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G +Q+ + LF Q+     + PD +++S  L   A+L +   G  +H    + GL   
Sbjct: 174 AKAGDFQEGVSLFRQMQCC-GVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEA 232

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN +++LY     +    +VF  +   D  SW + +S     G  D A ++F KM  
Sbjct: 233 CAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWS 292

Query: 152 RDLPVYN----AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
               + +    +++  C E G+E +G    + +H        YS  S       GLL   
Sbjct: 293 EGTEISSVTVLSVLPACAELGFELVG----KVVH-------GYSMKS-------GLLWDL 334

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDG 265
             + S + +       ++ + L+ MY  CG++  A +VF+   +KG V  H+ +N++M G
Sbjct: 335 ESVQSGIDE-------ALGSKLVFMYVKCGDMGSARRVFDAMPSKGNV--HV-WNLIMGG 384

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMS--ACL-CPRVGYQVHAQAMKSGFEAY 322
            A     EE+L+ F  M    + P E     ++    CL C R G   H   +K GF   
Sbjct: 385 YAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQ 444

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +V NA I+ Y+    ID A ++F R+  +D +SWN++IS      L   AI  ++ M  
Sbjct: 445 CAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWM 504

Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G   D  T  S+L   A S +  +  ++H +    G+I    ++NAL+  Y+       
Sbjct: 505 QGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHS 564

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGF--PVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             QIF NM+ +N+++W  +I  +   G    V GL    E+++  ++PD + ++  L   
Sbjct: 565 TNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGL--LQEMVLDGIKPDVFAVTSVLHGF 622

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A   SL+ GK +HGY ++N +   + + NA++ +Y  C +++ +  VF+ +  KD ISWN
Sbjct: 623 AGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWN 682

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LI  Y+++    E+ S F  M  + + KP+  T T +L A +    ++ G  I    + 
Sbjct: 683 TLIGGYSRNNFANESFSLFSDM--LLQFKPNTVTMTCILPAVASISSLERGREIHAYALR 740

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             GF+      + ++D+  + G L  A RV+  +  +    +W  + +    HG
Sbjct: 741 R-GFLEDSYTSNALVDMYVKCGALLVA-RVLFDRLTKKNLISWTIMIAGYGMHG 792



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 245/538 (45%), Gaps = 32/538 (5%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNA-LITMYFNCGNVVDACKVFEE 248
           S+ +V+ +C +   LE  R+ H+LV       + SV+   L+  Y  CG++  A  VF+E
Sbjct: 96  SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDE 155

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---- 304
               V D   +  +M   A  G  +E +  FR M    + P +   VS +  C+      
Sbjct: 156 MPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSP-DAHAVSCVLKCIASLGSI 214

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G  +H    K G     +V+NA I +YS CG +++A  +F  +  +D +SWN+ IS Y
Sbjct: 215 TEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGY 274

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
                   A+  + +M S G      T  S+L   A  GF  + +++H +   +G++ ++
Sbjct: 275 FSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDL 334

Query: 422 Q---------VSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQG 471
           +         + + L+  Y K   +  A ++F  M  + N+  WN ++ G+       + 
Sbjct: 335 ESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEES 394

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F ++    + PDE+ LS  L     +S  R G   HGY++K    ++ ++ NA+I+ 
Sbjct: 395 LLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISF 454

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAK   +D ++ VF+ M  +DTISWN++IS    +G   EA+  F  M   G  + D  T
Sbjct: 455 YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGH-ELDSTT 513

Query: 592 FTAVLSAC--SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
             +VL AC  SH   V    R+        G I      + +LD+           ++  
Sbjct: 514 LLSVLPACARSHYWFVG---RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD--KPSVYVLLSNIYAAAG 705
           +   Q    +W A+ ++    G   L   +AGLL E   D  KP V+ + S ++  AG
Sbjct: 571 NM-AQKNVVSWTAMITSYTRAG---LFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAG 624


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 203/611 (33%), Positives = 323/611 (52%), Gaps = 70/611 (11%)

Query: 189 NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           NY +AS+L +C ++      ++LH L+ K+       + N LIT Y+  GN+  A  VF+
Sbjct: 6   NY-YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFD 64

Query: 248 EAK-----------------GYVC------------DHISYNVMMDGLASVGRVEEALIR 278
                               G +             D +S+N+ + G A+ G   +A+  
Sbjct: 65  HIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRV 124

Query: 279 FRDMLV-ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           ++ ML  A++  + +TF +++  C    C  +G Q++ Q +K GF +   V +  + MY+
Sbjct: 125 YKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYT 184

Query: 335 S-------------------------------CGKIDEACMIFARLQEKDIVSWNTMIST 363
                                           CG I+E+  +F  L+E+D +SW  MI+ 
Sbjct: 185 KLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN 420
             Q  L R A+  + EM+  G   D+FTFGS+L + G +  +   + IHA+V       N
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V +AL+  Y+K   IK A  +F  M  +N+I+W  ++ G+  NGF  + ++ F E+  
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           + + PD++TL   +SSCA ++SL  G Q H   L + LIS +++ NA+ITLY KCG  + 
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTEN 424

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           S R+F  M  +D +SW AL++ YAQ G+  E +  F+ M   G +KPD  TF  VLSACS
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHG-LKPDGVTFIGVLSACS 483

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            AGLV+ G + F+SM+ ++G +P  DH +C++DLLGRAG L+EA   IN+         W
Sbjct: 484 RAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
             L S+C  HG++ +G+  A  L+  E   P+ YVLLS++YA+ G W++ A +R  ++  
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDK 603

Query: 721 GVIKQPGCSWI 731
            V K+PG SWI
Sbjct: 604 RVRKEPGYSWI 614



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/563 (27%), Positives = 270/563 (47%), Gaps = 44/563 (7%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           ++ L  C   +N     +LH   L+   +    ++N +++ Y    +L     VF  I  
Sbjct: 9   ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P+++SW T LS  +K+G +    ++F+ MP RD   +N  I+G    G     + +++ M
Sbjct: 69  PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLM 128

Query: 181 HK-LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
            K   +  +  +F+++L +C     ++ GRQ++  + K GF   V V + L+ MY   G 
Sbjct: 129 LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188

Query: 239 VVDA------------------------CKVFEEAKGYVC-----DHISYNVMMDGLASV 269
           + DA                        C + EE++   C     D IS+ +M+ GL   
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVS 326
           G   EAL  FR+M +A     + TF SV++AC   L    G Q+HA  +++  +    V 
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A + MYS C  I  A  +F R+ +K+++SW  M+  Y Q      A+  + EMQ  G+ 
Sbjct: 309 SALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVE 368

Query: 387 PDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD+FT GS+++S   +  +E     H    ++G+I+ I VSNALI+ Y K    + ++++
Sbjct: 369 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M+ R+ ++W  L+ G+   G   + +  F  +L   L+PD  T    LS+C+R   +
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLV 488

Query: 504 RHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVF--NMMIEKDTISWNALI 560
             G Q    ++K + ++  +     +I L  + G L+   R F  NM    D + W  L+
Sbjct: 489 EKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLE-EARNFINNMPCHPDVVGWATLL 547

Query: 561 SAYAQHGE---GKEAVSCFKAMQ 580
           S+   HG+   GK A     A++
Sbjct: 548 SSCRVHGDMEIGKWAADSLIALE 570



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 238/496 (47%), Gaps = 16/496 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N++++  +  G   DA+ ++  +     +  +  + ST L  C+  R    G Q++   L
Sbjct: 106 NLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQIL 165

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V + ++ +Y     +   KR F E+   +V    T ++   + G ++ +  
Sbjct: 166 KFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQR 225

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           +F  + +RD   +  MITG  +NG E   + +FREM       D ++F SVL+ C + L 
Sbjct: 226 LFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLA 285

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+Q+H+ V ++     V V +AL+ MY  C ++  A  VF+       + IS+  M+
Sbjct: 286 LGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQK--NVISWTAML 343

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G    G  EEA+  F +M    + P + T  SV+S+C        G Q H +A+ SG  
Sbjct: 344 VGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI 403

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           ++ +VSNA IT+Y  CG  + +  +F  +  +D VSW  +++ YAQ       I  +  M
Sbjct: 404 SFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERM 463

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNER 436
            + G++PD  TF  +L++   +G +E  ++   + +  +GI+  +     +I    +  R
Sbjct: 464 LAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGR 523

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-PDEYTLSVAL 494
           +++A    +NM    +++ W TL++   ++G    G      L+  E + P  Y L  +L
Sbjct: 524 LEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSL 583

Query: 495 SSCA----RISSLRHG 506
            +      +++ LR G
Sbjct: 584 YASKGKWDKVAQLRRG 599


>gi|359491917|ref|XP_003634341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 767

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/742 (29%), Positives = 364/742 (49%), Gaps = 116/742 (15%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           +  CA+LR+     +LHA  +  GLK+   + N +L++Y N   +    RVF  I  P+V
Sbjct: 1   MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNV 60

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           YSW T +S     G +  A ++F+KMP+RD   +N+M++G   NG  +  I +F  M   
Sbjct: 61  YSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATIKVFVSM--- 117

Query: 184 DVR-----RDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            VR      D +SF+ V+    + G L+   QLH    K  F     V  +++ MY  CG
Sbjct: 118 -VRDCCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCG 176

Query: 238 NVVDACKVFEE-----------------------------AKGYVCDHISYNVMMDGLAS 268
            +  A KVF                               AK    D +S+N M+  L+ 
Sbjct: 177 AMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQ 236

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQA--MKSGFEAYT 323
            G   E L  F +M     RP+ +T+ SV+SAC        G  +HA+   M+   + Y 
Sbjct: 237 HGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYA 296

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
                 I MY+ CG+++ A  +F  L E + VSW ++I   AQ      A++ + +M+ V
Sbjct: 297 GC--GLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV 354

Query: 384 GIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK------- 433
            +  D+FT  ++L    S   I + E +HA     G+ +++ V+NAL++ YAK       
Sbjct: 355 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 414

Query: 434 ------------------------NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
                                      +++A + F  M  RN+I+WN+++  ++  G+  
Sbjct: 415 NHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWE 474

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           +GL+ + ++L   ++ D  T S ++S+CA ++ L  G QI     K    S +S+ N+++
Sbjct: 475 EGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVV 534

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           T+Y++CG ++ + ++F+ ++ K+ +SWNA+++ YAQ+G+G++ +  F+ M ++G + PDQ
Sbjct: 535 TMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNV-PDQ 593

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            ++ +VLS                                   DLLGRAG L++A+ +IN
Sbjct: 594 ISYVSVLS-----------------------------------DLLGRAGQLEQAKNLIN 618

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
               +  +  W AL +AC  HGN +L  +    LLE + + P  Y LL+NIY+ +G  + 
Sbjct: 619 QMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQG 678

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
             N+R+L++  GV K PGCSWI
Sbjct: 679 VTNVRKLMRDKGVRKNPGCSWI 700



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 157/622 (25%), Positives = 291/622 (46%), Gaps = 60/622 (9%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  +  + +FV +       PD +S S  + A  +L       QLH +A +        
Sbjct: 104 NGELEATIKVFVSMVRDCCCVPDPFSFSCVMKASGSLGYLKLALQLHGFAEKFDFGIDTC 163

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V  ++L +Y     +   ++VF    NP ++ W + +   +K G V  A E+F KMP+RD
Sbjct: 164 VETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERD 223

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHS 212
              +N MI+  +++G+    +  F EM     R ++ ++ASVLS C +   LE+G  LH+
Sbjct: 224 TVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHA 283

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + +      V     LI MY  CG +  A +VF+    +  + +S+  ++ G+A  G  
Sbjct: 284 RIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEH--NAVSWTSLIGGVAQAGFQ 341

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAA 329
           EEAL+ F  M    +   + T  +V+  CL  +   +G Q+HA  +  G ++   V+NA 
Sbjct: 342 EEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANAL 401

Query: 330 ITMYSSC-------------------------------GKIDEACMIFARLQEKDIVSWN 358
           +TMY+ C                               G +++A   F ++ E++++SWN
Sbjct: 402 VTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWN 461

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFIN 415
           +M++TY QR      +  Y++M   G++ D  TF + +++   + ++     I A     
Sbjct: 462 SMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKL 521

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  +N+ V+N++++ Y++  +I++A ++F ++  +N+++WN ++ G+  NG   + ++ F
Sbjct: 522 GFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIF 581

Query: 476 SELLMSELRPDEYTLSVALSS-CARISSLRHGKQIHGYVLKNNLISKMSLG-NAMI--TL 531
            ++L     PD+ +    LS    R   L   K         NLI++M    NA I   L
Sbjct: 582 EKMLNIGNVPDQISYVSVLSDLLGRAGQLEQAK---------NLINQMPFKPNAAIWGAL 632

Query: 532 YAKC---GDLDCSLRVFNMMIEKDTI---SWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            A C   G+   +      ++E D     S+  L + Y++ G+ +   +  K M+D G  
Sbjct: 633 LAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVR 692

Query: 586 KPDQATFTAVLSACSHAGLVDD 607
           K    ++  V +   H   VDD
Sbjct: 693 KNPGCSWIEVDNRV-HVFTVDD 713



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 156/276 (56%), Gaps = 4/276 (1%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  ++++G  ++AL LF Q+     +  D ++L+T L  C + ++ + G QLHA+ +  G
Sbjct: 332 IGGVAQAGFQEEALVLFNQMREV-PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRG 390

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L +   VAN ++++Y    D+      F  +   D+ SWT  ++A ++ G V+ A E FD
Sbjct: 391 LDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFD 450

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           KMP+R++  +N+M+    + GY + G+ ++ +M +  V+ D  +F++ +S C D  +L  
Sbjct: 451 KMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLIL 510

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q+ +   K GFS  VSV N+++TMY  CG + +A K+F      + + +S+N MM G 
Sbjct: 511 GNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSI--VMKNLVSWNAMMAGY 568

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
           A  G+  + +  F  ML     P ++++VSV+S  L
Sbjct: 569 AQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSDLL 604


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 206/703 (29%), Positives = 368/703 (52%), Gaps = 44/703 (6%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++AL LF ++  S  ++P+  S ++ L AC N  +   G +LHAY  +AGL+    V
Sbjct: 281 GDSREALALFRKLIRS-GIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLV 339

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N ++S+Y                               ++ G +  A +VFD +   + 
Sbjct: 340 GNALISMY-------------------------------SRCGSLANARQVFDNLRSLNR 368

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
             +NAMI G  E G  +    LFR M +   + D +++AS+L++C D   L+ G++LHS 
Sbjct: 369 TTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQ 427

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           +  +G+   ++V  ALI+MY  CG+  +A KVF +      + IS+N  +         +
Sbjct: 428 IASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPER--NVISWNAFISCCCRHDLGK 485

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAI 330
           EA   F+ M    + P  +TF++++++C  P     G  +H +  + G  +   V+NA I
Sbjct: 486 EAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALI 545

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           +MY  CG + +A  +F R++ +D+ SWN MI+   Q     SA   + + +S G + D++
Sbjct: 546 SMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKY 605

Query: 391 TFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           TF ++L +   +E ++   MIH  V   G   +I+V   LI  Y+K   ++ A  +F  +
Sbjct: 606 TFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTV 665

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             ++++ WN ++  +  +      L+ F ++ +  + PD  T S AL++CAR++++ HGK
Sbjct: 666 QEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGK 725

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           +IH  + +  + +   + N++I +Y++CG L  + +VF  M+ +D  SWNALI+ Y Q+G
Sbjct: 726 KIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNG 785

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
           +G  A+  ++ M     I P++ATFT++LS+ +  G  +      +S+  ++   P+E H
Sbjct: 786 QGNIALEYYELMLRAS-IVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQH 844

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI-IAGLLLER 686
            + M+  LGRAG L EAE  I     ++ +  W +L  AC  H N+ L    +  LL  +
Sbjct: 845 YAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAK 904

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            Q  P+V   L +IYAAAG WE+ + ++  ++  G++    C+
Sbjct: 905 AQASPAVCEQLMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT 947



 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 193/631 (30%), Positives = 321/631 (50%), Gaps = 20/631 (3%)

Query: 105 ARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           A+ L   K+V   +++    PD+Y     +S  +K G ++ A  VF  M D+D+  +NAM
Sbjct: 113 AKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAM 172

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGF 219
           I+G   +G +     LF +M +  ++ +  +F S+LS C + + LEFG Q+HS + K+G+
Sbjct: 173 ISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGY 232

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              V+V  ALI MY  CG++  A KVF E +    + +S+  M+ G    G   EAL  F
Sbjct: 233 ESDVNVSTALINMYCKCGSLELARKVFNEMRER--NVVSWTAMISGYVQHGDSREALALF 290

Query: 280 RDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
           R ++ + ++P++++F S++ AC  P     G ++HA   ++G E    V NA I+MYS C
Sbjct: 291 RKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRC 350

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G +  A  +F  L+  +  +WN MI+ Y +  L   A   +  M+  G +PD+FT+ SLL
Sbjct: 351 GSLANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLL 409

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              A    ++  + +H+ +   G  T++ V+ ALIS YAK    ++A ++F+ M  RN+I
Sbjct: 410 AICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVI 469

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN  I+    +    +  Q F ++   ++ PD  T    L+SC     L  G+ IHG +
Sbjct: 470 SWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKI 529

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
            +  ++S   + NA+I++Y +CG+L  +  VF  +  +D  SWNA+I+A  QHG    A 
Sbjct: 530 NQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAF 589

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F+  +  G  K D+ TF  VL A ++   +D G R+   +V   GF      L+ ++ 
Sbjct: 590 DLFRKYRSEGG-KGDKYTFINVLRAVANLEDLDAG-RMIHGLVEKGGFGKDIRVLTTLIK 647

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG--RIIAGLLLEREQDKP 691
           +  + G L +AE V ++  +Q +    W    A  AH +      ++   + LE      
Sbjct: 648 MYSKCGSLRDAENVFST--VQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDS 705

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           S Y    N  A     E    I   LK  G+
Sbjct: 706 STYSTALNACARLTAVEHGKKIHAQLKEAGM 736



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 197/710 (27%), Positives = 360/710 (50%), Gaps = 52/710 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +  G  Q+A  LF Q+     LKP+  +  + L+AC +     FG Q+H
Sbjct: 166 VVSWNAMISGYALHGRDQEAADLFYQMQR-EGLKPNQNTFISILSACQSPIALEFGEQIH 224

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +   +AG ++  +V+  ++++Y     L   ++VF+E++  +V SWT             
Sbjct: 225 SRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWT------------- 271

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  ++G     + LFR++ +  ++ +  SFAS+L  C 
Sbjct: 272 ------------------AMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACT 313

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G +LH+ + ++G    V V NALI+MY  CG++ +A +VF+  +    +  ++
Sbjct: 314 NPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSL--NRTTW 371

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV----GYQVHAQAM 315
           N M+ G    G +EEA   FR M     +P + T+ S+++ C   R     G ++H+Q  
Sbjct: 372 NAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAIC-ADRADLDRGKELHSQIA 429

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
            +G++   +V+ A I+MY+ CG  +EA  +F ++ E++++SWN  IS   + +LG+ A  
Sbjct: 430 STGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQ 489

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYA 432
           A+ +M+   + PD  TF +LL S    E +E    IH  +   G+++N  V+NALIS Y 
Sbjct: 490 AFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYG 549

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           +   +  A ++F+ +  R++ +WN +I   + +G        F +      + D+YT   
Sbjct: 550 RCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFIN 609

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L + A +  L  G+ IHG V K      + +   +I +Y+KCG L  +  VF+ + EKD
Sbjct: 610 VLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKD 669

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            + WNA+++AYA    G++A+  F+ MQ  G + PD +T++  L+AC+    V+ G +I 
Sbjct: 670 VVCWNAMLAAYAHSDRGQDALKLFQQMQLEG-VNPDSSTYSTALNACARLTAVEHGKKIH 728

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHG 671
            + + + G        + ++++  R G L  A++V   + + +R  N W AL +    +G
Sbjct: 729 -AQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVF--EKMLSRDINSWNALIAGYCQNG 785

Query: 672 NLRLGRIIAGLLLERE--QDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
              +      L+L      +K +   +LS+ YA  G  E+A +  E +K+
Sbjct: 786 QGNIALEYYELMLRASIVPNKATFTSILSS-YAQLGEEEQAFDFLESIKK 834



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 143/342 (41%), Gaps = 32/342 (9%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N  LA  + S   QDAL LF Q+     + PD  + ST L ACA L     G ++HA   
Sbjct: 674  NAMLAAYAHSDRGQDALKLFQQMQL-EGVNPDSSTYSTALNACARLTAVEHGKKIHAQLK 732

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             AG++    V+N+++ +Y     L S K+VF ++ + D+ SW   ++   + G  + A E
Sbjct: 733  EAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALE 792

Query: 145  VFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASV 195
             ++ M      P++    + ++++   + G E+        + K   ++    +Y++  V
Sbjct: 793  YYELMLRASIVPNK--ATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYM-V 849

Query: 196  LSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY--- 252
             ++  AGLL+   +    ++    + +   +     ++ N      A +   +AK     
Sbjct: 850  AALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKAQASP 909

Query: 253  -VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCP 304
             VC+      +M   A+ GR E+  +    M  A L   +   + V S         L P
Sbjct: 910  AVCEQ-----LMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCTIEVNSEFHNFIANHLSP 964

Query: 305  RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            ++G Q   + +       T    +    Y+S    ++ C+ F
Sbjct: 965  QIGVQCKIEEL---VRKMTDRGFSLDPQYASNDSREKECLFF 1003


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 50/719 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +LS  L  C +          H YA + GL     VA  ++++Y     +   + +F E+
Sbjct: 154 TLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEM 213

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEV--------------------------------- 145
              DV  W   L A  +MG  + A ++                                 
Sbjct: 214 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVK 273

Query: 146 -FDKMPD----RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            F+   D     ++   N +++G    G     +  F +M + D+  D  +F  VL+   
Sbjct: 274 SFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAV 333

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L  G+Q+H +  K G   +++V N+LI MY     +  A  VF        D IS+
Sbjct: 334 RLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSER--DLISW 391

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM 315
           N ++ G+A      EA+  F  +L   L+P   T  SV+ A      G     Q+H  A+
Sbjct: 392 NSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAI 451

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+   A + VS A I  YS    + EA ++F R    D+V+WN M+S Y Q + G   + 
Sbjct: 452 KTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLE 510

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  M   G R D+FT  ++L + GF   I   + +HA+   +G   ++ VS+ ++  Y 
Sbjct: 511 LFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 570

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +  A   F ++   + + W TLI+G + NG   + L  FS++ +  + PDE+T++ 
Sbjct: 571 KCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIAT 630

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
              + + +++L  G+QIH   LK N  S   +G +++ +YAKCG +D +  +F  +   +
Sbjct: 631 LAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 690

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
             +WNA++   AQHGEGKEA+  FK M+ +G IKPD+ TF  VLSACSH+GLV +  +  
Sbjct: 691 ITAWNAMLVGLAQHGEGKEALQLFKQMESLG-IKPDKVTFIGVLSACSHSGLVSEAYKYI 749

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            SM  DYG  P  +H SC+ D LGRAG + EAE +I+S  ++A +  +  L +AC   G+
Sbjct: 750 RSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGD 809

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              G+ +A  LLE E    S YVLLSN+YAAA  W+E    R ++K   V K PG SWI
Sbjct: 810 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 868



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 255/574 (44%), Gaps = 53/574 (9%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT-------GCT 165
           R+ +  +NP+ +     +S  +K G + YA  VFDKMP+RDL  +N+++        G  
Sbjct: 71  RILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVV 130

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVS 224
           EN  E     LFR + +  V     + + +L +C  +G +      H    K G      
Sbjct: 131 ENVKE--AFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDF 188

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V  AL+ +Y   G V +   +FEE      D + +N+M+     +G  EEA+        
Sbjct: 189 VAGALVNIYLKFGKVKEGRVLFEEMPYR--DVVLWNLMLKAYLEMGFKEEAIDLSSAFHT 246

Query: 285 ASLRPSELTFVSVMSACLCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           + L P+E+T        L  R+ G    A  +KS FE     S  +              
Sbjct: 247 SGLHPNEITLR------LLSRISGDDSEAGQVKS-FENGNDASAVS-------------- 285

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
                    +I+S N ++S Y       + +  +++M    +  D+ TF  +LA++  ++
Sbjct: 286 ---------EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLD 336

Query: 404 MV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +   + +H      G+   + VSN+LI+ Y K  +I  A  +F+NMS R++I+WN++I 
Sbjct: 337 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIA 396

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS-LRHGKQIHGYVLKNNLI 519
           G   +   V+ +  F +LL   L+PD YT++  L + + +   L   KQIH + +K N +
Sbjct: 397 GIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNV 456

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +   +  A+I  Y++   +  +  +F      D ++WNA++S Y Q  +G + +  F  M
Sbjct: 457 ADSFVSTALIDAYSRNRCMKEAEVLFGRN-NFDLVAWNAMMSGYTQSHDGHKTLELFALM 515

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
              G  + D  T   VL  C     ++ G ++    +   G+       S +LD+  + G
Sbjct: 516 HKQGE-RSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCG 573

Query: 640 YLDEAERVINSQHIQARSD-NWWALFSACAAHGN 672
            +  A+   +S  I    D  W  L S C  +G 
Sbjct: 574 DMSAAQFAFDS--IPVPDDVAWTTLISGCIENGE 605



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 214/495 (43%), Gaps = 43/495 (8%)

Query: 12  GNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR 71
           GN  ++   ++  N  L+    +G Y   L  F+ +  S  L+ D  +    LA    L 
Sbjct: 278 GNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVES-DLECDQVTFILVLATAVRLD 336

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           + A G Q+H  AL+ GL     V+N+++++Y   R +   + VF                
Sbjct: 337 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF---------------- 380

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
                          + M +RDL  +N++I G  ++  E   + LF ++ +  ++ D+Y+
Sbjct: 381 ---------------NNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYT 425

Query: 192 FASVLSVCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
             SVL    +    L   +Q+H    K+       V  ALI  Y     + +A  +F   
Sbjct: 426 MTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRN 485

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRV 306
                D +++N MM G        + L  F  M     R  + T  +V+  C        
Sbjct: 486 N---FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQ 542

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G QVHA A+KSG++    VS+  + MY  CG +  A   F  +   D V+W T+IS   +
Sbjct: 543 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE 602

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQV 423
                 A+  + +M+ +G+ PDEFT  +L  +S  +  +E    IHA        ++  V
Sbjct: 603 NGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFV 662

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +L+  YAK   I  AY +F  +   NI  WN ++ G   +G   + LQ F ++    +
Sbjct: 663 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGI 722

Query: 484 RPDEYTLSVALSSCA 498
           +PD+ T    LS+C+
Sbjct: 723 KPDKVTFIGVLSACS 737



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 8/111 (7%)

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S L  GK  H  +L      +  L N +I++Y+KCG L  + RVF+ M E+D +SWN+++
Sbjct: 60  SDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSIL 119

Query: 561 SAYAQHGEG-----KEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLV 605
           +AYAQ  EG     KEA   F+ + QDV  +   + T + +L  C H+G V
Sbjct: 120 AAYAQSSEGVVENVKEAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYV 168


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 190/543 (34%), Positives = 296/543 (54%), Gaps = 42/543 (7%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF----RDM 282
           N L+  Y   G++ +  + FE+      D +++NV+++G +  G V  A+  +    +D 
Sbjct: 73  NNLLLAYSKSGHLSEMERTFEKLPDR--DGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF 130

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS-------- 334
                R + +T + + S+     +G Q+H Q +K GFE+Y  V +  + MYS        
Sbjct: 131 SSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDA 190

Query: 335 -----------------------SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                  +CG I++A  +F R  EKD VSW+ MI   AQ  + +
Sbjct: 191 KKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF-RGMEKDSVSWSAMIKGLAQNGMEK 249

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            AI  + EM+  G++ D++ FGS+L + G +  +     IHA +    +  +I V +ALI
Sbjct: 250 EAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALI 309

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K + +  A  +F  M  +N+++W  ++ G+   G   + ++ F ++  S + PD Y
Sbjct: 310 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHY 369

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL  A+S+CA ISSL  G Q HG  +   LI  +++ N+++TLY KCGD+D S R+FN M
Sbjct: 370 TLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEM 429

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +D +SW A++SAYAQ G   EA+  F  M  +G +KPD  T T V+SACS AGLV+ G
Sbjct: 430 NVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLG-LKPDGVTLTGVISACSRAGLVEKG 488

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            R F+ M+N+YG +P+  H SCM+DL  R+G ++EA   IN    +  +  W  L SAC 
Sbjct: 489 QRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACR 548

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
             GNL +G+  A  L+E +   P+ Y LLS+IYA+ G W+  A +R  +K   V K+PG 
Sbjct: 549 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQ 608

Query: 729 SWI 731
           SWI
Sbjct: 609 SWI 611



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 257/545 (47%), Gaps = 38/545 (6%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           S  +  C  L  +     +H   +R        + N I+  Y   R  +  +RVF  I  
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P+++SW   L A +K GH+      F+K+PDRD   +N +I G + +G     +  +  M
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 126

Query: 181 HK-LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
            K         +  ++L +  + G +  G+Q+H  V K GF   + V + L+ MY   G 
Sbjct: 127 MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGC 186

Query: 239 VVDACKVF------------------------EEA----KGYVCDHISYNVMMDGLASVG 270
           + DA KVF                        E+A    +G   D +S++ M+ GLA  G
Sbjct: 187 ISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNG 246

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
             +EA+  FR+M +  L+  +  F SV+ AC        G Q+HA  +++  + +  V +
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGS 306

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MY  C  +  A  +F R+++K++VSW  M+  Y Q      A+  +L+MQ  GI P
Sbjct: 307 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDP 366

Query: 388 DEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D +T G  +++   I  +E     H      G+I  I VSN+L++ Y K   I  + ++F
Sbjct: 367 DHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLF 426

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + M+ R+ ++W  +++ +   G  V+ +Q F +++   L+PD  TL+  +S+C+R   + 
Sbjct: 427 NEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVE 486

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISA 562
            G++    ++    ++      + MI L+++ G ++ ++   N M    D I W  L+SA
Sbjct: 487 KGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSA 546

Query: 563 YAQHG 567
               G
Sbjct: 547 CRNKG 551



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 241/527 (45%), Gaps = 56/527 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L T L   ++  + + G Q+H   ++ G ++Y  V + +L +Y     +   K+VF  +
Sbjct: 138 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGL 197

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            + +   + T +      G ++ A ++F  M ++D   ++AMI G  +NG E   I  FR
Sbjct: 198 DDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFR 256

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EM    ++ D Y F SVL  C   G +  GRQ+H+ + ++     + V +ALI MY  C 
Sbjct: 257 EMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCK 316

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A  VF+  K    + +S+  M+ G    GR  EA+  F DM  + + P   T    
Sbjct: 317 CLHYAKTVFDRMKQK--NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQA 374

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +SAC        G Q H +A+ +G   Y +VSN+ +T+Y  CG ID++  +F  +  +D 
Sbjct: 375 ISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDE 434

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF--V 412
           VSW  M+S YAQ      AI  + +M  +G++PD  T   ++++     +VE    +  +
Sbjct: 435 VSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFEL 494

Query: 413 FIN--GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            IN  GI+ +    + +I  ++++ RI++A                    GF +NG P  
Sbjct: 495 MINEYGIVPSNGHYSCMIDLFSRSGRIEEAM-------------------GF-INGMP-- 532

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI- 529
                        RPD    +  LS+C    +L  GK     +++  L      G  ++ 
Sbjct: 533 ------------FRPDAIGWTTLLSACRNKGNLEIGKWAAESLIE--LDPHHPAGYTLLS 578

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDT--------ISWNALISAYAQHGE 568
           ++YA  G  DC  ++   M EK+         I W   + +++   E
Sbjct: 579 SIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDE 625



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 164/358 (45%), Gaps = 50/358 (13%)

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFH 445
           P+ F   +++ +   I     I+A    +GI   N+   N L+ AY+K+  + +  + F 
Sbjct: 36  PETFLHNNIVHAYALIR--SSIYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFE 93

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD--EYTLSVALSSCARISSL 503
            +  R+ +TWN LI G+ L+G     ++ ++ + M +   +    TL   L   +    +
Sbjct: 94  KLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM-MKDFSSNLTRVTLMTMLKLSSSNGHV 152

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAK----------------------------- 534
             GKQIHG V+K    S + +G+ ++ +Y+K                             
Sbjct: 153 SLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGL 212

Query: 535 --CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
             CG ++ +L++F  M EKD++SW+A+I   AQ+G  KEA+ CF+ M+  G +K DQ  F
Sbjct: 213 LACGMIEDALQLFRGM-EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEG-LKMDQYPF 270

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVIN 649
            +VL AC   G ++DG +I   ++        +DH+   S ++D+  +   L  A+ V +
Sbjct: 271 GSVLPACGGLGAINDGRQIHACIIR----TNLQDHIYVGSALIDMYCKCKCLHYAKTVFD 326

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL-LEREQDKPSVYVLLSNIYAAAGL 706
               Q    +W A+       G  R G  +   L ++R    P  Y L   I A A +
Sbjct: 327 RMK-QKNVVSWTAMVVGYGQTG--RAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 80/330 (24%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   +A+ +F+ +  S  + PD Y+L   ++ACAN+ +   G+Q H  A+ AGL  Y 
Sbjct: 345 QTGRAGEAVKIFLDMQRS-GIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYI 403

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V+N++++LY    D+    R+F+E+   D  SWT  +SA  + G    A ++FDKM   
Sbjct: 404 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMV-- 461

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
                                        +L ++ D  +   V+S C  AGL+E G++  
Sbjct: 462 -----------------------------QLGLKPDGVTLTGVISACSRAGLVEKGQRYF 492

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L               +I  Y                 G V  +  Y+ M+D  +  GR
Sbjct: 493 EL---------------MINEY-----------------GIVPSNGHYSCMIDLFSRSGR 520

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFE-------AYTS 324
           +EEA+     M     RP  + + +++SAC   +   ++   A +S  E        YT 
Sbjct: 521 IEEAMGFINGM---PFRPDAIGWTTLLSACR-NKGNLEIGKWAAESLIELDPHHPAGYTL 576

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +S    ++Y+S GK D    +   ++EK++
Sbjct: 577 LS----SIYASKGKWDCVAQLRRGMKEKNV 602



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 5/157 (3%)

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S  +  C  + + RH K IHG +++     +  L N ++  YA       + RVF+ + +
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            +  SWN L+ AY++ G   E    F+ + D      D  T+  ++   S +GLV    +
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPD-----RDGVTWNVLIEGYSLSGLVGAAVK 121

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
            +++M+ D+        L  ML L    G++   +++
Sbjct: 122 AYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQI 158


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 191/558 (34%), Positives = 311/558 (55%), Gaps = 11/558 (1%)

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +   + + ++   +L  C D G +  G Q+H  V KSGF   V V  +LI+MY   GN
Sbjct: 1   MCEFGEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGN 60

Query: 239 VVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             +A KVF    G  C  +   N M+      G  + A+  F  ++   L P++ TF ++
Sbjct: 61  FDEAEKVF---NGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNI 117

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           +S C     G Q+H  A+K G    TSV NA ITMY   G ++EA  +F+ + +K+++SW
Sbjct: 118 ISTCNVEE-GKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISW 176

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFI 414
             +IS Y +   G  A+  +LE++  G+  D     ++L   +    +++   IH  V  
Sbjct: 177 TALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIK 236

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G   +I +  ALI  YAK +  + A  +F+ +SPR+  ++N ++ GF+ N    +    
Sbjct: 237 LGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMV 296

Query: 475 F-SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
           F S+L ++ ++PD  + S  LS  A  +SL  G+ +H Y +K      +S+ NA+IT+YA
Sbjct: 297 FLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYA 356

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG ++ + + FN M   D ISWNA+ISAY+ HG+G++A+  ++ M++ G   PD+ T  
Sbjct: 357 KCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKG-FTPDEITIL 415

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            +L AC+++GL +DG  +F++M + YG  P  +H +CM+DLLGRAGYL +A  +IN    
Sbjct: 416 VILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPF 475

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
              +  W  L + C   G+L LG++ +  LL+   D+   YVL+SNIYA  G+ +EA+ +
Sbjct: 476 SESTLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKV 535

Query: 714 RELLKRTGVIKQPGCSWI 731
           R  +K   + K+ G SW+
Sbjct: 536 RTTMKDLKLSKEAGSSWV 553



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 264/567 (46%), Gaps = 59/567 (10%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L AC+++ +   G Q+H + +++G +    V  +++S+Y                     
Sbjct: 17  LQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMY--------------------- 55

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                     ++ G+ D A +VF+ +  +DL   N MI    + GYE   IG+F  +  +
Sbjct: 56  ----------SRSGNFDEAEKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISV 105

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            +  ++Y+F +++S C+   +E G+QLH L  K G     SV NA+ITMY   G V +A 
Sbjct: 106 GLDPNDYTFTNIISTCN---VEEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAA 162

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
           ++F        + IS+  ++ G    G  E+A+  F ++    +        +++  C  
Sbjct: 163 RMFSVMNKK--NLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSE 220

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           C    +G Q+H   +K G+    ++  A I +Y+ C     A  +F  L  +   S+N +
Sbjct: 221 CKNLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAI 280

Query: 361 ISTYAQRNLGRSAILAYL-EMQSVGIRPDEFTFGSLLA-SSGFIEMVE--MIHAFVFING 416
           +  + + +      + +L +++  GI+PD  +F  LL+ S+    +V+   +HA+    G
Sbjct: 281 LVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTG 340

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              +I VSNALI+ YAK   ++ AYQ F++MS  + I+WN +I+ + L+G   + L  + 
Sbjct: 341 FAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQ 400

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN------AMIT 530
           E+      PDE T+ V L +C        G    G  L N + SK  +         M+ 
Sbjct: 401 EMEEKGFTPDEITILVILQACT-----YSGLSEDGLHLFNTMESKYGIQPLLEHYACMVD 455

Query: 531 LYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           L  + G L  ++ + N     + T+ W  L++     G+        K + D   + PD+
Sbjct: 456 LLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLLD---LSPDE 512

Query: 590 A-TFTAVLSACSHAGLVDDGTRIFDSM 615
           A ++  V +  +  G++D+ +++  +M
Sbjct: 513 AGSYVLVSNIYAGEGMIDEASKVRTTM 539



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 215/477 (45%), Gaps = 56/477 (11%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           LN  +    ++G+ + A+ +F+ + S   L P+ Y+ +  ++ C    N   G QLH  A
Sbjct: 79  LNCMILEYGKAGYEKRAIGVFIYLISV-GLDPNDYTFTNIISTC----NVEEGKQLHGLA 133

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ G+     V N ++++Y     +    R+FS +   ++ SWT  +S            
Sbjct: 134 VKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALIS------------ 181

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
                              G T NGY +  +  F E+    V  D+   A++L  C +  
Sbjct: 182 -------------------GYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECK 222

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ G Q+H LV K G+ C +++  ALI +Y  C N   A  VF           S+N +
Sbjct: 223 NLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPR--STASFNAI 280

Query: 263 MDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMS-----ACLCPRVGYQVHAQAMK 316
           + G       EE  + F   L +A ++P  ++F  ++S     A L    G  +HA ++K
Sbjct: 281 LVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVK--GRGLHAYSIK 338

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +GF  + SVSNA ITMY+ CG +++A   F  +   D +SWN +IS Y+    G  A+L 
Sbjct: 339 TGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLL 398

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVE-MIHAFVFIN---GIITNIQVSNALISAYA 432
           Y EM+  G  PDE T   +L +  +  + E  +H F  +    GI   ++    ++    
Sbjct: 399 YQEMEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLG 458

Query: 433 KNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +   + QA  I  N SP   + + W TL+N   L G    G      LL  +L PDE
Sbjct: 459 RAGYLSQAMDII-NRSPFSESTLLWRTLVNVCKLCGDLNLGKLASKHLL--DLSPDE 512


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 184/522 (35%), Positives = 298/522 (57%), Gaps = 13/522 (2%)

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF  ++S  N LI MY  CG +  AC VF+       + +S+  +M G    G   E+L+
Sbjct: 4   GFDLMLS--NDLIVMYGKCGRLGVACDVFDRMLKR--NVVSWTALMCGHIQNGNPLESLL 59

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F  M ++ ++P++ TF + + AC       +G Q+H   +K+GF+    V N+ I MYS
Sbjct: 60  LFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYS 119

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG+I+EA  +F  +  ++++SWN MI+ Y        A++ + +MQ VG   DEFTF S
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTS 179

Query: 395 LLASS---GFIEMVEMIHAFVFINGII--TNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            L +    G I+    IHAF+   G +   N  V+ ALI  Y K  ++  A ++F ++  
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++I+W  LI G+   G   + ++ F +L  S ++ D + LS  +   A  + ++ GKQ+
Sbjct: 240 KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H + +K      +S+ N+++ +Y KCG ++ + R+F+ M  ++ ISW  +I+ Y +HG G
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           KEA+  F  MQ +   +PD  T+ AVL  CSH+GLV+ G   F  + + +G     +H +
Sbjct: 360 KEAIRLFDEMQ-LDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYA 418

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
           CM+DLLGRAG L EA+ +++S  ++A    W  L SAC  HG+L LG+ + G+LL  + +
Sbjct: 419 CMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSE 478

Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            P  YV++SNIYA AG W+E   IREL+K   + K+ G SW+
Sbjct: 479 NPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWV 520



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 230/454 (50%), Gaps = 22/454 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +  AC+VFD+M  R++  + A++ G  +NG     + LF +M    V+ ++++F++
Sbjct: 19  KCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFST 78

Query: 195 VLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            L  C  GL   L+ GRQ+H +  K+GF  +  V N++I MY  CG + +A  +FE    
Sbjct: 79  NLKAC--GLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP- 135

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGY 308
            V + IS+N M+ G    G  E+AL+ F+ M        E TF S + AC      + G 
Sbjct: 136 -VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGN 194

Query: 309 QVHAQAMKSGF--EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           Q+HA  +  GF     T+V+ A I +Y  CGK+  A  +F+ ++EK ++SW  +I  YAQ
Sbjct: 195 QIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQ 254

Query: 367 R-NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
             NL  S  L + +++   I+ D F   S++   A    ++  + +HAF        +I 
Sbjct: 255 EGNLAESMEL-FRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDIS 313

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V N+++  Y K   I +A ++F  M  RN+I+W  +I G+  +G   + ++ F E+ +  
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDL-DC 540
             PD+ T    L  C+    +  G++    +   + + +++     M+ L  + G L + 
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGE---GKE 571
              V +M +E +   W  L+SA   HG+   GKE
Sbjct: 434 KNLVDSMPLEANVGIWQTLLSACRVHGDLELGKE 467



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 191/363 (52%), Gaps = 16/363 (4%)

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF     +SN  I MY  CG++  AC +F R+ ++++VSW  ++  + Q      ++L +
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
            +M   G++P++FTF + L + G +  +++   IH      G      V N++I  Y+K 
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI +A  +F  M  RN+I+WN +I G+ + GF  + L  F ++       DE+T +  L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKM--SLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            +C+ + +++ G QIH +++    +  +  ++  A+I LY KCG L  + RVF+ + EK 
Sbjct: 182 KACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKH 241

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ISW ALI  YAQ G   E++  F+ +++   I+ D    ++++   +   LV  G ++ 
Sbjct: 242 VISWTALILGYAQEGNLAESMELFRQLRE-SSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 613 DSMVNDYGFIPAEDHLSC---MLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACA 668
              +     +P+   +S    +LD+  + G ++EAER+ +   + AR+  +W  + +   
Sbjct: 301 AFAIK----VPSGVDISVCNSILDMYLKCGMINEAERLFSE--MPARNVISWTVMITGYG 354

Query: 669 AHG 671
            HG
Sbjct: 355 KHG 357



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 52/463 (11%)

Query: 21  LLKLNISLANLSRSGHYQ-----DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           +LK N+        GH Q     ++L LF ++  S  +KP+ ++ ST L AC  L     
Sbjct: 33  MLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLS-GVKPNDFTFSTNLKACGLLNGLDI 91

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H   ++ G      V N+I+ +Y                               +K
Sbjct: 92  GRQIHDICVKTGFDMVNVVGNSIIDMY-------------------------------SK 120

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G ++ A  +F+ MP R+L  +NAMI G T  G+ +  + LF++M ++    D ++F S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 196 LSVC-DAGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           L  C D G ++ G Q+H+ +   GF  S   +V  ALI +Y  CG +  A +VF   +  
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE- 239

Query: 253 VCDH-ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGY 308
              H IS+  ++ G A  G + E++  FR +  +S++       S+M         + G 
Sbjct: 240 --KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA A+K       SV N+ + MY  CG I+EA  +F+ +  ++++SW  MI+ Y +  
Sbjct: 298 QMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHG 357

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVS 424
           LG+ AI  + EMQ     PD+ T+ ++L   + SG +E   E        +GI   ++  
Sbjct: 358 LGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHY 417

Query: 425 NALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
             ++    +  R+K+A  +  +M    N+  W TL++   ++G
Sbjct: 418 ACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  338 bits (867), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 216/699 (30%), Positives = 355/699 (50%), Gaps = 55/699 (7%)

Query: 45  VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKN 104
           +  H     K +    ++   +C          +LHA  + +G      ++  +++LY +
Sbjct: 64  IPFHWRQPAKNEEIDFNSLFDSCTK---TLLAKRLHALLVVSGKIQSNFISIRLVNLYAS 120

Query: 105 ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC 164
             D+   +  F +IQ  DVY+W + +SA  + GH   A + F                  
Sbjct: 121 LGDVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCF------------------ 162

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVS 224
               Y+ + +  F+         D Y+F  VL  C    L  GR++H  V K GF   V 
Sbjct: 163 ----YQLLLVTKFQA--------DFYTFPPVLKACQT--LVDGRKIHCWVFKLGFQWDVF 208

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V  +LI MY   G V  A  +F++      D  S+N M+ GL   G   +AL    +M +
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMP--FRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 266

Query: 285 ASLRPSELTFVSVMSACLCPRVG-----YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
             +    +T  S++   +C ++G       +H   +K G E    VSNA I MY+  G +
Sbjct: 267 EGINMDSVTVASILP--VCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNL 324

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT---FGSLL 396
            +A  +F ++  +D+VSWN++I+ Y Q +   +A   + +MQ  G+ PD  T     S+ 
Sbjct: 325 GDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIA 384

Query: 397 ASSGFIEMVEMIHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
           A S   +    +H F+   G ++  + + NA++  YAK   I  A+++F+ +  +++++W
Sbjct: 385 AQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSW 444

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRP---DEYTLSVALSSCARISSLRHGKQIHGY 512
           NTLI+G+  NG   + ++ +   +M E R    ++ T    L++ A + +L+ G +IHG+
Sbjct: 445 NTLISGYTQNGLASEAIEVYR--MMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGH 502

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           ++K NL   + +G  +I LY KCG L  ++ +F  +  + ++ WNA+IS +  HG G++A
Sbjct: 503 LIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKA 562

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F+ MQD G +KPD  TF ++LSACSH+GLVD+G   F  ++ +YG  P+  H  CM+
Sbjct: 563 LKLFREMQDEG-VKPDHVTFISLLSACSHSGLVDEGKWFF-HLMQEYGIKPSLKHYGCMV 620

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGRAG+L+ A   I    +   +  W AL  AC  HGN+ LG+  +  L E + +   
Sbjct: 621 DLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVG 680

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YVLLSNIYA  G WE    +R L +  G+ K PG S I
Sbjct: 681 YYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSI 719



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/547 (27%), Positives = 249/547 (45%), Gaps = 50/547 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+GH+++A+  F Q+    K + D Y+    L AC  L +   G ++H +  + G +   
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDV 207

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA +++ +Y                               ++ G V  A  +FD MP R
Sbjct: 208 FVAASLIHMY-------------------------------SRFGFVGIARSLFDDMPFR 236

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
           D+  +NAMI+G  +NG     + +  EM    +  D+ + AS+L VC   G +     +H
Sbjct: 237 DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIH 296

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
             V K G    + V NALI MY   GN+ DA KVF++   ++ D +S+N ++        
Sbjct: 297 LYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQM--FLRDVVSWNSIIAAYEQNDD 354

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ----VHAQAMKSGF--EAYTSV 325
              A   F  M +  L P  LT VS+ S     R  Y+    VH   M+ G+  EA   +
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR-DYKNSRSVHGFIMRRGWLMEAVV-I 412

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-G 384
            NA + MY+  G ID A  +F  +  KD+VSWNT+IS Y Q  L   AI  Y  M+    
Sbjct: 413 GNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECRE 472

Query: 385 IRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I+ ++ T+ S+LA+   +  ++    IH  +    +  ++ V   LI  Y K  R+  A 
Sbjct: 473 IKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F+ +   + + WN +I+   ++G   + L+ F E+    ++PD  T    LS+C+   
Sbjct: 533 CLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSG 592

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALI 560
            +  GK     + +  +   +     M+ L  + G L+ +   + +M +  D   W AL+
Sbjct: 593 LVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALL 652

Query: 561 SAYAQHG 567
            A   HG
Sbjct: 653 GACRIHG 659


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 193/544 (35%), Positives = 301/544 (55%), Gaps = 43/544 (7%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-- 284
           N L++ Y   G + D  +VF+    +  D +S+N ++ G A  G + E+ +R  +M++  
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSMPNH--DVVSWNSLLSGYAGNGLISES-VRVYNMMLKD 131

Query: 285 ASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            S+  + +TF +++   S      +G Q+H Q  K G+++Y  V +  + MY+  G I++
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND 191

Query: 342 ACMIFARLQEKDIV-------------------------------SWNTMISTYAQRNLG 370
           A  IF  + EK+IV                               SW T+I+   Q  L 
Sbjct: 192 ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLF 251

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNAL 427
           + A+  + EM   G   D+FTFGS+L A  GF+ + E   IHA++       NI V +AL
Sbjct: 252 KEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSAL 311

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K   +K A  +F  M  +N+I+W  ++ G+  NG+  + ++ F ++  +E+ PD+
Sbjct: 312 LDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDD 371

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +TL   +SSCA ++SL  G Q HG  L + LI  +++ NA+ITLY KCG L+ + ++F+ 
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHE 431

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M  +D +SW AL+S YAQ G+  E +S F+ M   G I PD  TF  VLSACS AGLV+ 
Sbjct: 432 MKIRDEVSWTALVSGYAQFGKANETISLFETMLAHG-IVPDGVTFVGVLSACSRAGLVEK 490

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ MV ++   P  DH +CM+DLL RAG L+EA+  IN       +  W  L S+C
Sbjct: 491 GYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSC 550

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             +GNL +G+  A  L + E   P+ Y+LLS+IYAA G W++ A +R+ ++  GV K+PG
Sbjct: 551 RLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPG 610

Query: 728 CSWI 731
            SWI
Sbjct: 611 HSWI 614



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 287/599 (47%), Gaps = 51/599 (8%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           +  L  C   RN A   +LH   +R        + N +++ Y    DL + + VF  I  
Sbjct: 9   TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P+++SW T LSA +K+G++     VFD MP+ D+  +N++++G   NG     + ++  M
Sbjct: 69  PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMM 128

Query: 181 HK---LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            K   +++ R  +S   +LS  + G ++ GRQ+H  + K G+   + V + L+ MY   G
Sbjct: 129 LKDGSVNLNRITFSTMLILS-SNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 238 NVVDACKVFEE--AKGYVC---------------------------DHISYNVMMDGLAS 268
            + DA ++FEE   K  V                            D IS+  ++ GL  
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
            G  +EA+ +F++M +      + TF SV++AC   L    G Q+HA  +++ ++    V
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            +A + MY  C  +  A  +F +++ K+++SW  M+  Y Q      A+  + +MQ   I
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD+FT GS+++S   +  +E     H     +G+I  + VSNALI+ Y K   ++ A+Q
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQ 427

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +FH M  R+ ++W  L++G+   G   + +  F  +L   + PD  T    LS+C+R   
Sbjct: 428 LFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGL 487

Query: 503 LRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
           +  G      ++K + I+ +      MI L ++ G L+ +    N M    D I W  L+
Sbjct: 488 VEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLL 547

Query: 561 SAYAQHGE---GKEAVSCFKAMQDVGRIKP-DQATFTAVLSACSHAGLVDDGTRIFDSM 615
           S+   +G    GK A       + + +++P + A++  + S  +  G  DD  ++   M
Sbjct: 548 SSCRLNGNLEIGKWAA------ESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGM 600



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 207/420 (49%), Gaps = 17/420 (4%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + ST L   +N      G Q+H    + G ++Y  V + ++ +Y     +    R+F EI
Sbjct: 140 TFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              ++  + T ++   +   +  A ++FD MP++D   +  +ITG T+NG     +  F+
Sbjct: 200 PEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFK 259

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EM       D ++F SVL+ C   L L+ G+Q+H+ + ++ +   + V +AL+ MY  C 
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCR 319

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           NV  A  VF + +    + IS+  M+ G    G  EEA+  F DM    + P + T  SV
Sbjct: 320 NVKYAEAVFRKMRHK--NVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSV 377

Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +S+C        G Q H QA+ SG   + +VSNA IT+Y  CG ++ A  +F  ++ +D 
Sbjct: 378 ISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDE 437

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           VSW  ++S YAQ       I  +  M + GI PD  TF  +L++     +VE    + + 
Sbjct: 438 VSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVE--KGYHYF 495

Query: 415 NGIITNIQVS------NALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
             ++   +++        +I   ++  R+++A    + M  SP + I W TL++   LNG
Sbjct: 496 ECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSP-DAIGWATLLSSCRLNG 554



 Score = 46.2 bits (108), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 21/198 (10%)

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           A+   L C  R+   +   +T  +N LI+ Y + G+ K A + F  +      +P+  ++
Sbjct: 22  AQVKKLHC--RIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP-----QPNLFSW 74

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA--GYLDEAERVIN- 649
             +LSA S  G + D  R+FDSM       P  D +S    L G A  G + E+ RV N 
Sbjct: 75  NTLLSAYSKLGYLQDMQRVFDSM-------PNHDVVSWNSLLSGYAGNGLISESVRVYNM 127

Query: 650 ---SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE-REQDKPSVYVLLSNIYAAAG 705
                 +      +  +    +  G + LGR I G + +   Q    V   L ++YA  G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187

Query: 706 LWEEAANIRELLKRTGVI 723
              +A  I E +    ++
Sbjct: 188 FINDANRIFEEIPEKNIV 205


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 213/661 (32%), Positives = 328/661 (49%), Gaps = 68/661 (10%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G  DYA  V +++       +N +I    + G  D  I +   M +   R D+++   VL
Sbjct: 103 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 162

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVC 254
             C +      G   H L+  +GF   V + NAL+ MY  CG++ +A  +F+E  +  + 
Sbjct: 163 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 222

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSE-----LTFVSVMSAC----LCP 304
           D IS+N ++           AL  F  M L+   +P+      ++ V+++ AC      P
Sbjct: 223 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 282

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM---- 360
           +   +VH  A+++G      V NA I  Y+ CG ++ A  +F  ++ KD+VSWN M    
Sbjct: 283 QTK-EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 341

Query: 361 -------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
                                          I+ Y+QR     A+  + +M   G  P+ 
Sbjct: 342 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 401

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIIT----------NIQVSNALISAYAKNER 436
            T  S+L   AS G       IHA+   N ++T          ++ V NALI  Y+K   
Sbjct: 402 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 461

Query: 437 IKQAYQIFHN--MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSV 492
            K A  IF +  +  RN++TW  +I G    G     L+ F E++     + P+ YT+S 
Sbjct: 462 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 521

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            L +CA ++++R GKQIH YVL+++    S   + N +I +Y+KCGD+D +  VF+ M +
Sbjct: 522 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 581

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K  ISW ++++ Y  HG G EA+  F  M+  G + PD  TF  VL ACSH G+VD G  
Sbjct: 582 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLS 640

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            FDSM  DYG  P  +H +C +DLL R+G LD+A R +    ++  +  W AL SAC  H
Sbjct: 641 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 700

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ L       L+E   +    Y L+SNIYA AG W++ A IR L+K++G+ K+PGCSW
Sbjct: 701 SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 760

Query: 731 I 731
           +
Sbjct: 761 V 761



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 171/355 (48%), Gaps = 33/355 (9%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSG--------------------FEAYTSVSNAAITMY 333
           F S++  C      +Q+H Q + SG                    F +  S+    +  Y
Sbjct: 40  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 99

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
            +CG  D A ++  R+     V WN +I  + ++    SAI     M   G RPD FT  
Sbjct: 100 LACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLP 159

Query: 394 SLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
            +L + G +         H  +  NG  +N+ + NAL++ Y++   +++A  IF  ++ R
Sbjct: 160 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 219

Query: 451 ---NIITWNTLINGFLLNGFPVQGLQHFSELLM------SELRPDEYTLSVALSSCARIS 501
              ++I+WN++++  + +      L  FS++ +      +  R D  ++   L +C  + 
Sbjct: 220 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 279

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++   K++HG  ++N     + +GNA+I  YAKCG ++ +++VFNMM  KD +SWNA+++
Sbjct: 280 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 339

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            Y+Q G  + A   FK M+    I  D  T+TAV++  S  G   +   +F  M+
Sbjct: 340 GYSQSGNFEAAFELFKNMRK-ENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 393



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 150/621 (24%), Positives = 259/621 (41%), Gaps = 92/621 (14%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++L   L AC  L +   G+  H      G ++   + N ++++Y     L     
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211

Query: 114 VFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           +F EI      DV SW + +SA  K  +   A ++F KM                     
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT-------------------- 251

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
                L       + R D  S  ++L  C +   +   +++H    ++G    V V NAL
Sbjct: 252 -----LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 306

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE---------------- 273
           I  Y  CG + +A KVF   +    D +S+N M+ G +  G  E                
Sbjct: 307 IDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 364

Query: 274 -------------------EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
                              EAL  FR M+ +   P+ +T +SV+SAC        G ++H
Sbjct: 365 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 424

Query: 312 AQAMKS----------GFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNT 359
           A ++K+          G +    V NA I MYS C     A  IF    L+E+++V+W  
Sbjct: 425 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 484

Query: 360 MISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           MI  +AQ      A+  ++EM  +  G+ P+ +T   +L +   +  + +   IHA+V  
Sbjct: 485 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544

Query: 415 NGIITNIQ--VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           +    +    V+N LI  Y+K   +  A  +F +MS ++ I+W +++ G+ ++G   + L
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F ++  +   PD+ T  V L +C+    +  G      +  +  L  +       I L
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664

Query: 532 YAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
            A+ G LD + R V +M +E   + W AL+SA   H   + A      + ++     +  
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN--AENDG 722

Query: 591 TFTAVLSACSHAGLVDDGTRI 611
           ++T + +  + AG   D  RI
Sbjct: 723 SYTLISNIYATAGRWKDVARI 743



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 220/498 (44%), Gaps = 54/498 (10%)

Query: 1   MLQRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKP----- 55
           + QR I   I+ NS  S  +            +S +   AL LF ++      KP     
Sbjct: 216 ITQRGIDDVISWNSIVSAHV------------KSSNAWTALDLFSKMTLIVHEKPTNERS 263

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           DI S+   L AC +L+      ++H  A+R G      V N ++  Y     + +  +VF
Sbjct: 264 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 323

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYED 171
           + ++  DV SW   ++  ++ G+ + A E+F  M   ++P+    + A+I G ++ G   
Sbjct: 324 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 383

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS------ 224
             + LFR+M       +  +  SVLS C + G    G ++H+   K+   CL++      
Sbjct: 384 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN---CLLTLDNDFG 440

Query: 225 -------VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
                  V NALI MY  C +   A  +F++      + +++ VM+ G A  G   +AL 
Sbjct: 441 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 500

Query: 278 RFRDMLVAS--LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS----VSNA 328
            F +M+     + P+  T   ++ AC      R+G Q+HA  ++     Y S    V+N 
Sbjct: 501 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHRYESSAYFVANC 558

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MYS CG +D A  +F  + +K  +SW +M++ Y     G  A+  + +M+  G  PD
Sbjct: 559 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 618

Query: 389 EFTFGSLLASSGFIEMVEM----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           + TF  +L +     MV+       +     G+    +     I   A++ R+ +A++  
Sbjct: 619 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 678

Query: 445 HNMS-PRNIITWNTLING 461
            +M      + W  L++ 
Sbjct: 679 KDMPMEPTAVVWVALLSA 696


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  338 bits (866), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 213/661 (32%), Positives = 328/661 (49%), Gaps = 68/661 (10%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G  DYA  V +++       +N +I    + G  D  I +   M +   R D+++   VL
Sbjct: 110 GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVL 169

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVC 254
             C +      G   H L+  +GF   V + NAL+ MY  CG++ +A  +F+E  +  + 
Sbjct: 170 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 229

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSE-----LTFVSVMSAC----LCP 304
           D IS+N ++           AL  F  M L+   +P+      ++ V+++ AC      P
Sbjct: 230 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 289

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM---- 360
           +   +VH  A+++G      V NA I  Y+ CG ++ A  +F  ++ KD+VSWN M    
Sbjct: 290 QTK-EVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 348

Query: 361 -------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
                                          I+ Y+QR     A+  + +M   G  P+ 
Sbjct: 349 SQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNC 408

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIIT----------NIQVSNALISAYAKNER 436
            T  S+L   AS G       IHA+   N ++T          ++ V NALI  Y+K   
Sbjct: 409 VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 468

Query: 437 IKQAYQIFHN--MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSV 492
            K A  IF +  +  RN++TW  +I G    G     L+ F E++     + P+ YT+S 
Sbjct: 469 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 528

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            L +CA ++++R GKQIH YVL+++    S   + N +I +Y+KCGD+D +  VF+ M +
Sbjct: 529 ILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQ 588

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K  ISW ++++ Y  HG G EA+  F  M+  G + PD  TF  VL ACSH G+VD G  
Sbjct: 589 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLS 647

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            FDSM  DYG  P  +H +C +DLL R+G LD+A R +    ++  +  W AL SAC  H
Sbjct: 648 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 707

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ L       L+E   +    Y L+SNIYA AG W++ A IR L+K++G+ K+PGCSW
Sbjct: 708 SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 767

Query: 731 I 731
           +
Sbjct: 768 V 768



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 171/355 (48%), Gaps = 33/355 (9%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSG--------------------FEAYTSVSNAAITMY 333
           F S++  C      +Q+H Q + SG                    F +  S+    +  Y
Sbjct: 47  FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 106

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
            +CG  D A ++  R+     V WN +I  + ++    SAI     M   G RPD FT  
Sbjct: 107 LACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLP 166

Query: 394 SLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
            +L + G +         H  +  NG  +N+ + NAL++ Y++   +++A  IF  ++ R
Sbjct: 167 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 226

Query: 451 ---NIITWNTLINGFLLNGFPVQGLQHFSELLM------SELRPDEYTLSVALSSCARIS 501
              ++I+WN++++  + +      L  FS++ +      +  R D  ++   L +C  + 
Sbjct: 227 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLK 286

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           ++   K++HG  ++N     + +GNA+I  YAKCG ++ +++VFNMM  KD +SWNA+++
Sbjct: 287 AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVA 346

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            Y+Q G  + A   FK M+    I  D  T+TAV++  S  G   +   +F  M+
Sbjct: 347 GYSQSGNFEAAFELFKNMRK-ENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMI 400



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 150/621 (24%), Positives = 259/621 (41%), Gaps = 92/621 (14%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++L   L AC  L +   G+  H      G ++   + N ++++Y     L     
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218

Query: 114 VFSEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           +F EI      DV SW + +SA  K  +   A ++F KM                     
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT-------------------- 258

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
                L       + R D  S  ++L  C +   +   +++H    ++G    V V NAL
Sbjct: 259 -----LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 313

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE---------------- 273
           I  Y  CG + +A KVF   +    D +S+N M+ G +  G  E                
Sbjct: 314 IDAYAKCGLMENAVKVFNMME--FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPL 371

Query: 274 -------------------EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
                              EAL  FR M+ +   P+ +T +SV+SAC        G ++H
Sbjct: 372 DVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIH 431

Query: 312 AQAMKS----------GFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNT 359
           A ++K+          G +    V NA I MYS C     A  IF    L+E+++V+W  
Sbjct: 432 AYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTV 491

Query: 360 MISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           MI  +AQ      A+  ++EM  +  G+ P+ +T   +L +   +  + +   IHA+V  
Sbjct: 492 MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551

Query: 415 NGIITNIQ--VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           +    +    V+N LI  Y+K   +  A  +F +MS ++ I+W +++ G+ ++G   + L
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F ++  +   PD+ T  V L +C+    +  G      +  +  L  +       I L
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671

Query: 532 YAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
            A+ G LD + R V +M +E   + W AL+SA   H   + A      + ++     +  
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN--AENDG 729

Query: 591 TFTAVLSACSHAGLVDDGTRI 611
           ++T + +  + AG   D  RI
Sbjct: 730 SYTLISNIYATAGRWKDVARI 750



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/498 (24%), Positives = 220/498 (44%), Gaps = 54/498 (10%)

Query: 1   MLQRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKP----- 55
           + QR I   I+ NS  S  +            +S +   AL LF ++      KP     
Sbjct: 223 ITQRGIDDVISWNSIVSAHV------------KSSNAWTALDLFSKMTLIVHEKPTNERS 270

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           DI S+   L AC +L+      ++H  A+R G      V N ++  Y     + +  +VF
Sbjct: 271 DIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVF 330

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYED 171
           + ++  DV SW   ++  ++ G+ + A E+F  M   ++P+    + A+I G ++ G   
Sbjct: 331 NMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSH 390

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS------ 224
             + LFR+M       +  +  SVLS C + G    G ++H+   K+   CL++      
Sbjct: 391 EALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN---CLLTLDNDFG 447

Query: 225 -------VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
                  V NALI MY  C +   A  +F++      + +++ VM+ G A  G   +AL 
Sbjct: 448 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 507

Query: 278 RFRDMLVAS--LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS----VSNA 328
            F +M+     + P+  T   ++ AC      R+G Q+HA  ++     Y S    V+N 
Sbjct: 508 LFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHRYESSAYFVANC 565

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MYS CG +D A  +F  + +K  +SW +M++ Y     G  A+  + +M+  G  PD
Sbjct: 566 LIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 625

Query: 389 EFTFGSLLASSGFIEMVEM----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           + TF  +L +     MV+       +     G+    +     I   A++ R+ +A++  
Sbjct: 626 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTV 685

Query: 445 HNMS-PRNIITWNTLING 461
            +M      + W  L++ 
Sbjct: 686 KDMPMEPTAVVWVALLSA 703


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 323/605 (53%), Gaps = 23/605 (3%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           AC VFD+MP R++  +  MI G TE+G    G   F EM    +  D +++++++  C  
Sbjct: 120 ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC-I 178

Query: 202 GL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           GL  LE G+ +H+ +   GF+  + V  +L+ MY   G++ D+  VF     +  + +S+
Sbjct: 179 GLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH--NQVSW 236

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
           N M+ G  S G   EA   F  M   +  P+  T VSV  A    +   +G +V   A +
Sbjct: 237 NAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASE 296

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS------WNTMISTYAQRNLG 370
            G E    V  A I MYS CG + +A  +F    + + ++      WN MIS Y+Q    
Sbjct: 297 LGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCS 352

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGI-ITNIQVSNA 426
           + A+  Y++M   GI  D +T+ S+   +A+S  ++   ++H  V   G+ +  + V+NA
Sbjct: 353 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 412

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +  AY+K   ++   ++F  M  R+I++W TL+  +  +    + L  F  +      P+
Sbjct: 413 IADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPN 472

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++T S  L SCA +  L +G+Q+HG + K  L ++  + +A+I +YAKCG +  + +VF+
Sbjct: 473 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 532

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            +   D +SW A+IS YAQHG  ++A+  F+ M+  G IK +  T   VL ACSH G+V+
Sbjct: 533 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG-IKANAVTLLCVLFACSHGGMVE 591

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F  M + YG +P  +H +C++DLLGR G LD+A   I    ++     W  L   
Sbjct: 592 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 651

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN+ LG I A  +L    +  + YVLLSN Y   G +E+  ++R ++K  GV K+P
Sbjct: 652 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 711

Query: 727 GCSWI 731
           G SWI
Sbjct: 712 GYSWI 716



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 273/598 (45%), Gaps = 52/598 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +  G + D    F ++ +S  L PD ++ S  + +C  L +   G  +HA  +  G   +
Sbjct: 143 TEHGLFFDGFKFFCEMLNSGIL-PDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATH 201

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V+ ++L++Y     +     VF+ +   +  SW   +S CT  G    A ++F +M +
Sbjct: 202 IFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKN 261

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
                       CT N Y  + +                   +V  + D  +   G+++ 
Sbjct: 262 ----------GACTPNMYTLVSVS-----------------KAVGKLVDVNM---GKEVQ 291

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           +  ++ G    V V  ALI MY  CG++ DA  VF+        +  +N M+ G +  G 
Sbjct: 292 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 351

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE-AYTSVSN 327
            +EAL  +  M    +     T+ SV +A    +    G  VH   +K G +    SV+N
Sbjct: 352 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 411

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A    YS CG +++   +F R++E+DIVSW T+++ Y+Q +LG  A+  +  M+  G  P
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 471

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++FTF S+L   AS  F+E    +H  +   G+ T   + +ALI  YAK   I +A ++F
Sbjct: 472 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 531

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +S  +I++W  +I+G+  +G     LQ F  + +S ++ +  TL   L +C+    + 
Sbjct: 532 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 591

Query: 505 HG----KQIH-GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNA 558
            G    +Q+  GY     ++ +M     +I L  + G LD ++  +  M +E + + W  
Sbjct: 592 EGLFYFQQMEDGY----GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQT 647

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPD-QATFTAVLSACSHAGLVDDGTRIFDSM 615
           L+     HG  +       A + +  I+P+  AT+  + +     G  +DG  + + M
Sbjct: 648 LLGGCRVHGNVELGEI---AARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 702



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 36/439 (8%)

Query: 305 RVGYQVHAQAMKSGFEA--YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           R    VH   +KS FE      + N A  +YS C +   AC +F  + ++++ SW  MI 
Sbjct: 81  REAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIV 140

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIIT 419
              +  L       + EM + GI PD+F + +++ S      +E+ +M+HA + + G  T
Sbjct: 141 GSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFAT 200

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           +I VS +L++ YAK   I+ +Y +F+ M+  N ++WN +I+G   NG  ++    F  + 
Sbjct: 201 HIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMK 260

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
                P+ YTL     +  ++  +  GK++     +  +   + +G A+I +Y+KCG L 
Sbjct: 261 NGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLH 320

Query: 540 CSLRVF--NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +  VF  N +       WNA+IS Y+Q G  +EA+  +  M   G I  D  T+ +V +
Sbjct: 321 DARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG-ITSDLYTYCSVFN 379

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL------------GRAGYLDEAE 645
           A + +  +  G R+   MV           L C LDL+             + G+L++  
Sbjct: 380 AIAASKSLQFG-RVVHGMV-----------LKCGLDLMVVSVNNAIADAYSKCGFLEDVR 427

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +V +   ++ R    W       +  +L    +    L+  E   P+ +   S + + A 
Sbjct: 428 KVFD--RMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCAS 485

Query: 706 L--WEEAANIRELLKRTGV 722
           L   E    +  LL + G+
Sbjct: 486 LCFLEYGRQVHGLLCKAGL 504



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 50/389 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S+SG  Q+AL L+VQ+   + +  D+Y+  +   A A  ++  FG  +H   L
Sbjct: 340 NAMISGYSQSGCSQEALELYVQM-CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398

Query: 85  RAGLK-AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           + GL      V N I   Y     L  V++VF  ++  D+ SWTT ++A ++    + A 
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
             F  M                E G+                  + ++F+SVL  C +  
Sbjct: 459 ATFCLM---------------REEGFAP----------------NQFTFSSVLISCASLC 487

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            LE+GRQ+H L+ K+G      + +ALI MY  CG++ +A KVF++      D +S+  +
Sbjct: 488 FLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP--DIVSWTAI 545

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--VHAQAMKSGFE 320
           + G A  G VE+AL  FR M ++ ++ + +T + V+ AC    +  +   + Q M+ G+ 
Sbjct: 546 ISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYG 605

Query: 321 AYTSVSNAA--ITMYSSCGKIDEACMIFARL-QEKDIVSWNTMIS---TYAQRNLGRSAI 374
               + + A  I +    G++D+A     ++  E + + W T++     +    LG  A 
Sbjct: 606 VVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAA 665

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
              L      IRP E++   +L S+ +IE
Sbjct: 666 RKILS-----IRP-EYSATYVLLSNTYIE 688



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 40/331 (12%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K    + A  +F  M  RN+ +W  +I G   +G    G + F E+L S + PD++  
Sbjct: 111 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 170

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S  + SC  + SL  GK +H  ++     + + +  +++ +YAK G ++ S  VFNMM E
Sbjct: 171 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 230

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            + +SWNA+IS    +G   EA   F  M++ G   P+  T  +V  A      V+ G  
Sbjct: 231 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKN-GACTPNMYTLVSVSKAVGKLVDVNMGKE 289

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW--------- 661
           +  +  ++ G        + ++D+  + G L +A  V ++  I    +  W         
Sbjct: 290 V-QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 348

Query: 662 ---------------------------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
                                      ++F+A AA  +L+ GR++ G++L+   D   V 
Sbjct: 349 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 408

Query: 695 V--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           V   +++ Y+  G  E+   + + ++   ++
Sbjct: 409 VNNAIADAYSKCGFLEDVRKVFDRMEERDIV 439



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISK--MSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           L  CA   S+R  K +HG VLK+N   K  M L N    +Y+KC +   +  VF+ M ++
Sbjct: 71  LRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQR 130

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           +  SW  +I    +HG   +    F  M + G I PD+  ++A++ +C     ++ G  +
Sbjct: 131 NVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG-ILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN--SQHIQARSDNWWALFSACAA 669
              +V   GF       + +L++  + G ++++  V N  ++H Q    +W A+ S C +
Sbjct: 190 HAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQV---SWNAMISGCTS 245

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           +G L L      + ++     P++Y L+S
Sbjct: 246 NG-LHLEAFDLFVRMKNGACTPNMYTLVS 273


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  337 bits (865), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 225/711 (31%), Positives = 351/711 (49%), Gaps = 42/711 (5%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA---CANLRNAAFGNQLHAYALRAGLKA 90
           SG    AL  F  +  S    PD  S +   A    C+ LR+   G  +H + L +   A
Sbjct: 14  SGRLSAALRAFESLPFSPASAPDPLSAAAYAALVAACSRLRSFPQGRLVHRHLLASSAGA 73

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                NTILS +                         T    C      D A  VFD M 
Sbjct: 74  AYLARNTILSNH-----------------------LITMYGRCAA---PDSARMVFDGML 107

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           DR+   + A+I    +N      +GLF  M +L    D ++  S +  C + G L  GRQ
Sbjct: 108 DRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQ 167

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H+   KS     + V NAL+TMY   G+V D   +FE  +    D  S+  ++ GLA  
Sbjct: 168 VHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDK--DLFSWGSIIAGLAQQ 225

Query: 270 GRVEEALIRFRDMLVASLR-PSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTS 324
           GR  +AL  FR+M+   +  P+E  F SV  AC         G Q+H   +K   +  + 
Sbjct: 226 GREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRNSY 285

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
              +   MY+ C K+D A  +F R++  D+VSWN++I+ ++   L   A++ + EM+   
Sbjct: 286 AGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSS 345

Query: 385 IRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           ++PD  T  +LL +    + +     IH+++   G+  ++ V N+LIS Y +      A 
Sbjct: 346 LKPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAM 405

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +FH  + R+++TWN+++   + +       + F  L  S    D  +L+  LS+ A + 
Sbjct: 406 DVFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELG 465

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
                KQ+H Y  K  L+S   L NA+I  YAKCG LD + ++F +M   +D  SW++LI
Sbjct: 466 YFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 525

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YAQ G  KEA+  F  M+++G +KP+  TF  VL ACS  GLVD+G   +  M  +YG
Sbjct: 526 VGYAQFGYAKEALDLFARMRNLG-VKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYG 584

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
            +P ++H SC++DLL RAG L EA + ++    +     W  L +A   H ++ +G+  A
Sbjct: 585 IVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAA 644

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +L  +    + YVLL NIYA++G W E A +++ ++ +GV K PG SWI
Sbjct: 645 EGVLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWI 695



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 208/449 (46%), Gaps = 56/449 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA-AFGNQLHAYALRA 86
           +A L++ G   DALH+F ++ +     P+ +   +   AC+ + N+  +G Q+H   ++ 
Sbjct: 219 IAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKY 278

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
            L    +   ++  +Y     L S  +VF  I++PD+ SW                    
Sbjct: 279 KLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSW-------------------- 318

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV---CDAGL 203
                      N++I   + +G     + LF EM    ++ D  +  ++L     CDA  
Sbjct: 319 -----------NSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDA-- 365

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR +HS + K G    V V N+LI+MY  C +   A  VF E      D +++N ++
Sbjct: 366 LRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDR--DVVTWNSIL 423

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPS--ELTFVSVMSACLCPRVGY-----QVHAQAMK 316
                   +E+    FR  L+ S  PS   ++  +V+SA     +GY     QVHA A K
Sbjct: 424 TACVQHRHMEDVFKLFR--LLHSSMPSLDRISLNNVLSA--SAELGYFEMAKQVHAYAFK 479

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAIL 375
            G  +   +SNA I  Y+ CG +D+A  +F  +   +D+ SW+++I  YAQ    + A+ 
Sbjct: 480 VGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALD 539

Query: 376 AYLEMQSVGIRPDEFTF-GSLLASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAY 431
            +  M+++G++P+  TF G L+A S    + E  + +  +    GI+   +  + +I   
Sbjct: 540 LFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLL 599

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLI 459
           A+  R+ +A +    M    +II WNTL+
Sbjct: 600 ARAGRLSEAAKFVDQMPFEPDIIMWNTLL 628



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 155/356 (43%), Gaps = 43/356 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   S  G   +A+ LF ++  S  LKPD  ++   L AC        G  +H
Sbjct: 315 LVSWNSLINAFSADGLLSEAMVLFSEMRYS-SLKPDGITVMALLCACVGCDALRQGRSIH 373

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +Y ++ GL     V N+++S+Y    D  S   VF E  + DV +W + L+AC +  H++
Sbjct: 374 SYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHME 433

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-C 199
              +VF                             LFR +H      D  S  +VLS   
Sbjct: 434 ---DVFK----------------------------LFRLLHSSMPSLDRISLNNVLSASA 462

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G  E  +Q+H+   K G      + NALI  Y  CG++ DA K+F E  G   D  S+
Sbjct: 463 ELGYFEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLF-EIMGTGRDVFSW 521

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG------YQVHAQ 313
           + ++ G A  G  +EAL  F  M    ++P+ +TFV V+ A  C RVG      Y     
Sbjct: 522 SSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIA--CSRVGLVDEGCYYYSIM 579

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
             + G        +  I + +  G++ EA     ++  E DI+ WNT+++     N
Sbjct: 580 EPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHN 635


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 219/697 (31%), Positives = 364/697 (52%), Gaps = 58/697 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNA-AFGNQLHAYALRAGLK-AYPHVANTILSLYKNARDLVS 110
            + D  SLS  L+AC++L++  +FG  +H+  ++ G +     VAN++++ Y        
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYY------- 313

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   ++G  + A EVF    +++L  +NAMI G  EN   
Sbjct: 314 ------------------------ELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRV 349

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF---SCLVSVV 226
           +  + +F+EM   + + D  +  +++S C D GLL  G+++H  + K G     C  SV 
Sbjct: 350 NEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEEC--SVG 406

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA---SVGRVEEALIRFRDML 283
           N+L+ +Y  C +   A  +F      + D IS+N M+ G +   S+G  EEA   F+ +L
Sbjct: 407 NSLLDLYMKCNDPSTARILFRTMP--MRDLISWNTMISGYSRNDSLG--EEAKAMFKGLL 462

Query: 284 VASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              L  +  T V+V+ +C CP+    G  VH+  +K GF    S +N+ I MY  CG   
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSL 522

Query: 341 EACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLAS 398
            A  +   +    DI+SWNT I    Q  L   A+ A+  M S + + PD  T  S+L+ 
Sbjct: 523 AAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSV 582

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            G +++  +   IH       I  N++V NAL++ Y +    + A  IF ++  RN+ +W
Sbjct: 583 CGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSW 642

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N +I+GF  N   ++  Q + +  M +  P+E ++   + +C ++  LR GK IHG+V++
Sbjct: 643 NCMISGFAQNNEGLRAFQFYKK--MEDFEPNEISIVGIICACTQLGDLRQGKNIHGHVVR 700

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L + + +  +++ +Y+KCG LD S+RVF    EK    WN++ISA+  HG G +++  
Sbjct: 701 FGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEI 760

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M + G +K  ++TF A+LSACSH+GL D+G + +  M+  +G IP  +H  C++D+L
Sbjct: 761 FWKMNNSG-VKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDML 819

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GRAG L EA + + S   +     W AL SAC+    L++   +A  LL  E +    YV
Sbjct: 820 GRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYV 879

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
            +SN+YA   +W  A  +R++L+  G++K  G S IG
Sbjct: 880 TMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSIIG 916



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 180/628 (28%), Positives = 305/628 (48%), Gaps = 35/628 (5%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D+  W T +    K G    +  VF +MP RD   +N+M++G   NG  +I    F+E
Sbjct: 196 DTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 180 MHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSGFS-CLVSVVNALITMYFNC 236
           M +   + D  S + VLS C     L  FG  +HS V K G+     SV N+LIT Y+  
Sbjct: 256 MVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYEL 315

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G    A +VF        + +++N M+ GL    RV EA+  F++M   + +P   T V+
Sbjct: 316 GFPEAAEEVFLSTSNK--NLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVT 372

Query: 297 VMSAC----LCPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           ++SAC    L P  G +VH   +K G      SV N+ + +Y  C     A ++F  +  
Sbjct: 373 IISACGDHGLLPE-GKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPM 431

Query: 352 KDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEM 407
           +D++SWNTMIS Y++ + LG  A   +  + S G+     T  +++ S      +   + 
Sbjct: 432 RDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKS 491

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNG 466
           +H+F+   G +T +  +N+LI  Y        A+ +  +++P  +II+WNT I G + NG
Sbjct: 492 VHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNG 551

Query: 467 FPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
                L+ F  +  +  L PD  TL   LS C  +     GK IH   LK  +   + + 
Sbjct: 552 LYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVK 611

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           NA++T+Y + GD + +  +F+ ++ ++  SWN +IS +AQ+ EG  A   +K M+D    
Sbjct: 612 NALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKKMED---F 668

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG-----FIPAEDHLSCMLDLLGRAGY 640
           +P++ +   ++ AC+  G +  G  I   +V  +G     FI A      ++D+  + G 
Sbjct: 669 EPNEISIVGIICACTQLGDLRQGKNIHGHVVR-FGLQTNVFISAS-----LVDMYSKCGR 722

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHG-NLRLGRIIAGLLLEREQDKPSVYVLLSN 699
           LD + RV  S   ++ +  W ++ SA   HG  L+   I   +     +   S ++ L +
Sbjct: 723 LDISIRVFESSAEKSIA-CWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLS 781

Query: 700 IYAAAGLWEEAANIRELL-KRTGVIKQP 726
             + +GL +E      L+ +  G+I  P
Sbjct: 782 ACSHSGLTDEGLKYYHLMIEHFGIIPTP 809



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 159/570 (27%), Positives = 253/570 (44%), Gaps = 54/570 (9%)

Query: 59  SLSTTLAAC--ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           S+   L AC  A+   A     LH  AL++G    P V  ++++ Y   RD+ S      
Sbjct: 63  SIVRALGACRGASREEADGVAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCS------ 116

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
                                    A +VFD+    DL ++NA I+  T N      + L
Sbjct: 117 -------------------------ALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVL 151

Query: 177 FREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           FR M  +    D+ S   +LS    A  LE G   H +  K      +S+ N L+ MY  
Sbjct: 152 FRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAK 211

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG+   +  VF+       D  S+N M+ G    G  E +   F++M+ +S +  E++  
Sbjct: 212 CGDFYSSEVVFQRMPYR--DTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLS 269

Query: 296 SVMSACLCPR----VGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQ 350
            V+SAC   +     G  VH+  +K G+E  T SV+N+ IT Y   G  + A  +F    
Sbjct: 270 CVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTS 329

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
            K++V+WN MI    + +    A+  + EM+S   +PD  T  +++++    G +   + 
Sbjct: 330 NKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKE 388

Query: 408 IHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN- 465
           +H ++   G I     V N+L+  Y K      A  +F  M  R++I+WNT+I+G+  N 
Sbjct: 389 VHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRND 448

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               +    F  LL   L     T+   + SC     L  GK +H ++LK   ++ +S  
Sbjct: 449 SLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAA 508

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE----KDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           N++I +Y  CGD   SL  F+++       D ISWN  I    Q+G   +A+  F+ M  
Sbjct: 509 NSLIHMYICCGD---SLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHS 565

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              + PD  T  +VLS C +  L   G  I
Sbjct: 566 TLTLNPDSITLVSVLSVCGNLKLQSLGKSI 595



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/597 (24%), Positives = 271/597 (45%), Gaps = 55/597 (9%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +TS + L+  N  +  L  +    +A+ +F ++ S  K +PD+ +L T ++AC +     
Sbjct: 327 STSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRS--KNQPDVATLVTIISACGDHGLLP 384

Query: 75  FGNQLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            G ++H Y ++ G +     V N++L LY    D  + + +F  +   D+ SW T +S  
Sbjct: 385 EGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGY 444

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           ++           D + +       AM  G    G                    + + +
Sbjct: 445 SRN----------DSLGEEA----KAMFKGLLSEGL-------------------SCTLS 471

Query: 194 SVLSVCDAGL----LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +V++V  +      L FG+ +HS + K GF   VS  N+LI MY  CG+ + A  + E  
Sbjct: 472 TVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESI 531

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC---LCPR 305
              + D IS+N  + G    G   +AL  F+ M    +L P  +T VSV+S C       
Sbjct: 532 TP-ISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQS 590

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  +H  A+K   E    V NA +TMY   G  + A +IF+ L  +++ SWN MIS +A
Sbjct: 591 LGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFA 650

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQ 422
           Q N G  A   Y +M+     P+E +   ++ +    G +   + IH  V   G+ TN+ 
Sbjct: 651 QNNEGLRAFQFYKKMED--FEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVF 708

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +S +L+  Y+K  R+  + ++F + + ++I  WN++I+ F  +G  ++ ++ F ++  S 
Sbjct: 709 ISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSG 768

Query: 483 LRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           ++    T    LS+C+       G K  H  +    +I        ++ +  + G L  +
Sbjct: 769 VKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEA 828

Query: 542 LRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +    +  K     W AL+SA ++  E K    C    + +  ++P+ + +   +S
Sbjct: 829 HKFVESLPSKQAHGVWGALLSACSKKSELK---MCESVAKHLLCLEPENSGYYVTMS 882



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 207/423 (48%), Gaps = 15/423 (3%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH    KSG      V  ++IT Y    +V  A +VF+EA     D I +N  +  L   
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAP--DLILWNAAISALTLN 142

Query: 270 GRVEEALIRFR---DMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
            R  +A++ FR   D+L      S +  +S  S       G   H  A+K   +   S+ 
Sbjct: 143 CRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLW 202

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  + MY+ CG    + ++F R+  +D  SWN+M+S      L   +   + EM     +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 387 PDEFTFGSLLASSGFIEMV----EMIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAY 441
            DE +   +L++   ++ +    E +H+ V   G   T   V+N+LI+ Y +    + A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F + S +N++TWN +I G + N    + +  F E + S+ +PD  TL   +S+C    
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISACGDHG 381

Query: 502 SLRHGKQIHGYVLKNNLI-SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            L  GK++HGY++K   I  + S+GN+++ LY KC D   +  +F  M  +D ISWN +I
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 561 SAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           S Y+++   G+EA + FK +   G +    +T  AV+ +C     ++ G  +  S +  Y
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEG-LSCTLSTVVAVIPSCFCPQDLNFGKSV-HSFILKY 499

Query: 620 GFI 622
           GF+
Sbjct: 500 GFL 502



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 145/328 (44%), Gaps = 15/328 (4%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           V  +H     +G + +  V  ++I+AY++   +  A Q+F   +  ++I WN  I+   L
Sbjct: 82  VAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTL 141

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           N      +  F  ++      D  ++ + LS  +R  SL HG   HG  LK  L + +SL
Sbjct: 142 NCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSL 201

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            N ++ +YAKCGD   S  VF  M  +DT SWN+++S    +G  + +   FK M     
Sbjct: 202 WNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR-SS 260

Query: 585 IKPDQATFTAVLSACSH-AGLVDDGTRIFDSMVNDYGFIPAEDHLS----CMLDLLGRAG 639
            + D+ + + VLSACSH   L   G  +  S++     +  ED  S     ++      G
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIK----LGYEDTTSSVANSLITFYYELG 316

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
           + + AE V  S         W A+        N R+   +      R +++P V  L++ 
Sbjct: 317 FPEAAEEVFLSTS-NKNLVTWNAMIKGLVE--NDRVNEAMCMFQEMRSKNQPDVATLVTI 373

Query: 700 IYAAA--GLWEEAANIRELLKRTGVIKQ 725
           I A    GL  E   +   + + G I +
Sbjct: 374 ISACGDHGLLPEGKEVHGYIIKKGHIYE 401


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 323/605 (53%), Gaps = 23/605 (3%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           AC VFD+MP R++  +  MI G TE+G    G   F EM    +  D +++++++  C  
Sbjct: 174 ACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSC-I 232

Query: 202 GL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           GL  LE G+ +H+ +   GF+  + V  +L+ MY   G++ D+  VF     +  + +S+
Sbjct: 233 GLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEH--NQVSW 290

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
           N M+ G  S G   EA   F  M   +  P+  T VSV  A    +   +G +V   A +
Sbjct: 291 NAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASE 350

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS------WNTMISTYAQRNLG 370
            G E    V  A I MYS CG + +A  +F    + + ++      WN MIS Y+Q    
Sbjct: 351 LGIEGNVLVGTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCS 406

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGI-ITNIQVSNA 426
           + A+  Y++M   GI  D +T+ S+   +A+S  ++   ++H  V   G+ +  + V+NA
Sbjct: 407 QEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNA 466

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +  AY+K   ++   ++F  M  R+I++W TL+  +  +    + L  F  +      P+
Sbjct: 467 IADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPN 526

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++T S  L SCA +  L +G+Q+HG + K  L ++  + +A+I +YAKCG +  + +VF+
Sbjct: 527 QFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFD 586

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            +   D +SW A+IS YAQHG  ++A+  F+ M+  G IK +  T   VL ACSH G+V+
Sbjct: 587 KISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG-IKANAVTLLCVLFACSHGGMVE 645

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F  M + YG +P  +H +C++DLLGR G LD+A   I    ++     W  L   
Sbjct: 646 EGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGG 705

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN+ LG I A  +L    +  + YVLLSN Y   G +E+  ++R ++K  GV K+P
Sbjct: 706 CRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEP 765

Query: 727 GCSWI 731
           G SWI
Sbjct: 766 GYSWI 770



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 273/598 (45%), Gaps = 52/598 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +  G + D    F ++ +S  L PD ++ S  + +C  L +   G  +HA  +  G   +
Sbjct: 197 TEHGLFFDGFKFFCEMLNSGIL-PDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATH 255

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V+ ++L++Y     +     VF+ +   +  SW   +S CT  G    A ++F +M +
Sbjct: 256 IFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKN 315

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
                       CT N Y  + +                   +V  + D  +   G+++ 
Sbjct: 316 ----------GACTPNMYTLVSVS-----------------KAVGKLVDVNM---GKEVQ 345

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           +  ++ G    V V  ALI MY  CG++ DA  VF+        +  +N M+ G +  G 
Sbjct: 346 NCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC 405

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE-AYTSVSN 327
            +EAL  +  M    +     T+ SV +A    +    G  VH   +K G +    SV+N
Sbjct: 406 SQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNN 465

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A    YS CG +++   +F R++E+DIVSW T+++ Y+Q +LG  A+  +  M+  G  P
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++FTF S+L   AS  F+E    +H  +   G+ T   + +ALI  YAK   I +A ++F
Sbjct: 526 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 585

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +S  +I++W  +I+G+  +G     LQ F  + +S ++ +  TL   L +C+    + 
Sbjct: 586 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVE 645

Query: 505 HG----KQIH-GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNA 558
            G    +Q+  GY     ++ +M     +I L  + G LD ++  +  M +E + + W  
Sbjct: 646 EGLFYFQQMEDGY----GVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQT 701

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPD-QATFTAVLSACSHAGLVDDGTRIFDSM 615
           L+     HG  +       A + +  I+P+  AT+  + +     G  +DG  + + M
Sbjct: 702 LLGGCRVHGNVELGEI---AARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVM 756



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 200/439 (45%), Gaps = 36/439 (8%)

Query: 305 RVGYQVHAQAMKSGFEA--YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           R    VH   +KS FE      + N A  +YS C +   AC +F  + ++++ SW  MI 
Sbjct: 135 REAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQRNVFSWTVMIV 194

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIIT 419
              +  L       + EM + GI PD+F + +++ S      +E+ +M+HA + + G  T
Sbjct: 195 GSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFAT 254

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           +I VS +L++ YAK   I+ +Y +F+ M+  N ++WN +I+G   NG  ++    F  + 
Sbjct: 255 HIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMK 314

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
                P+ YTL     +  ++  +  GK++     +  +   + +G A+I +Y+KCG L 
Sbjct: 315 NGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLH 374

Query: 540 CSLRVF--NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +  VF  N +       WNA+IS Y+Q G  +EA+  +  M   G I  D  T+ +V +
Sbjct: 375 DARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNG-ITSDLYTYCSVFN 433

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL------------GRAGYLDEAE 645
           A + +  +  G R+   MV           L C LDL+             + G+L++  
Sbjct: 434 AIAASKSLQFG-RVVHGMV-----------LKCGLDLMVVSVNNAIADAYSKCGFLEDVR 481

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +V +   ++ R    W       +  +L    +    L+  E   P+ +   S + + A 
Sbjct: 482 KVFD--RMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCAS 539

Query: 706 L--WEEAANIRELLKRTGV 722
           L   E    +  LL + G+
Sbjct: 540 LCFLEYGRQVHGLLCKAGL 558



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 50/389 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S+SG  Q+AL L+VQ+   + +  D+Y+  +   A A  ++  FG  +H   L
Sbjct: 394 NAMISGYSQSGCSQEALELYVQM-CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452

Query: 85  RAGLK-AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           + GL      V N I   Y     L  V++VF  ++  D+ SWTT ++A ++    + A 
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
             F  M                E G+                  + ++F+SVL  C +  
Sbjct: 513 ATFCLM---------------REEGFAP----------------NQFTFSSVLISCASLC 541

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            LE+GRQ+H L+ K+G      + +ALI MY  CG++ +A KVF++      D +S+  +
Sbjct: 542 FLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP--DIVSWTAI 599

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--VHAQAMKSGFE 320
           + G A  G VE+AL  FR M ++ ++ + +T + V+ AC    +  +   + Q M+ G+ 
Sbjct: 600 ISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYG 659

Query: 321 AYTSVSNAA--ITMYSSCGKIDEACMIFARL-QEKDIVSWNTMIS---TYAQRNLGRSAI 374
               + + A  I +    G++D+A     ++  E + + W T++     +    LG  A 
Sbjct: 660 VVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAA 719

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
              L      IRP E++   +L S+ +IE
Sbjct: 720 RKILS-----IRP-EYSATYVLLSNTYIE 742



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 40/331 (12%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K    + A  +F  M  RN+ +W  +I G   +G    G + F E+L S + PD++  
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S  + SC  + SL  GK +H  ++     + + +  +++ +YAK G ++ S  VFNMM E
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            + +SWNA+IS    +G   EA   F  M++ G   P+  T  +V  A      V+ G  
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKN-GACTPNMYTLVSVSKAVGKLVDVNMGKE 343

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW--------- 661
           +  +  ++ G        + ++D+  + G L +A  V ++  I    +  W         
Sbjct: 344 V-QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQ 402

Query: 662 ---------------------------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
                                      ++F+A AA  +L+ GR++ G++L+   D   V 
Sbjct: 403 SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVS 462

Query: 695 V--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           V   +++ Y+  G  E+   + + ++   ++
Sbjct: 463 VNNAIADAYSKCGFLEDVRKVFDRMEERDIV 493



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 28/284 (9%)

Query: 433 KNERIKQAYQIFHNMSPRNI--ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           KNE + +  Q F + +PR +  I W  ++ G L    P Q  +  S++++   RP+   +
Sbjct: 54  KNEFLHET-QCF-STAPRTVQKIDW-VVLTGSLAVSVPSQTAKK-SKIVVGRNRPESIGI 109

Query: 491 SVA------------LSSCARISSLRHGKQIHGYVLKNNLISK--MSLGNAMITLYAKCG 536
           S              L  CA   S+R  K +HG VLK+N   K  M L N    +Y+KC 
Sbjct: 110 SETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCS 169

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +   +  VF+ M +++  SW  +I    +HG   +    F  M + G I PD+  ++A++
Sbjct: 170 EFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSG-ILPDKFAYSAII 228

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN--SQHIQ 654
            +C     ++ G  +   +V   GF       + +L++  + G ++++  V N  ++H Q
Sbjct: 229 QSCIGLDSLELGKMVHAQIVMR-GFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQ 287

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
               +W A+ S C ++G L L      + ++     P++Y L+S
Sbjct: 288 V---SWNAMISGCTSNG-LHLEAFDLFVRMKNGACTPNMYTLVS 327


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 205/715 (28%), Positives = 369/715 (51%), Gaps = 29/715 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA--LRAGL 88
            + +GH+    +       ++ +KP   +L TTL A            LH  A  ++ G 
Sbjct: 46  FTNAGHFGSKQYELTLSLMNNIIKPCTRNLVTTLTAPKP--------HLHVDASIIKTGF 97

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
               + +N ++  +    DL   +++F E+ + +++S  T +    K G++  A  +FD 
Sbjct: 98  NPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDS 157

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG- 207
           M  R    +  +I G  +N       GLF EM +  +  D+ S A++LS    G  EF  
Sbjct: 158 MFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS----GFTEFDS 213

Query: 208 ----RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               RQ+HS V K G+   + V N+L+  Y    ++  A ++F +      D +++N ++
Sbjct: 214 VNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPER--DSVTFNALL 271

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
            G +  G   EA+  F  M     RP+E TF ++++A +       G QVH   +K  F 
Sbjct: 272 TGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFV 331

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+NA +  YS   ++ EA  +F  + E D +S+N +++ YA     + ++  + E+
Sbjct: 332 WNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKEL 391

Query: 381 QSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G     F F +LL+ +     +++   IH+   +   I+ I V N+L+  YAK    
Sbjct: 392 QFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEF 451

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A +IF +++ ++ + W  +I+ ++  G    GL+ F E+  +++  D  T +  + +C
Sbjct: 452 GEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRAC 511

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A ++SL  GKQ+H +++ +  IS +  G+A++ +YAKCG +  +L++F  M  ++++SWN
Sbjct: 512 ASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWN 571

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ALISAYAQ+G+G   +  F+ M   G ++PD  +  ++L ACSH GLV++G + FDSM  
Sbjct: 572 ALISAYAQNGDGDCTLRLFEEMVRSG-LQPDSVSLLSILCACSHCGLVEEGLQYFDSMTR 630

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            Y  +P ++H +  +D+L R G  DEAE+++     +     W ++ ++C  H N  L +
Sbjct: 631 IYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAK 690

Query: 678 IIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  L   +  + +  YV +SNIYAAAG W+    +++ ++  GV K P  SW+
Sbjct: 691 KAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWV 745


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 191/616 (31%), Positives = 333/616 (54%), Gaps = 13/616 (2%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N  ++  T+ +    K+G   +A  +FD+M  RD+  +N +I G ++NGY    I LF +
Sbjct: 88  NQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVD 147

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M + + + +  +  S+L  C    L F GR +H    K+GF     + NAL++MY  C +
Sbjct: 148 MLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDD 207

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  +  +F+E        +S+N M+      G  ++A++ F++ML     PS +T ++++
Sbjct: 208 LEASQLLFDEMDEKSV--VSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLV 265

Query: 299 SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
           SA   P     VH   +K GF    SV  + + +Y+  G  + A  ++     KD+++  
Sbjct: 266 SANAFPE---NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLT 322

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
            +IS+Y+++    SA+  +++   + I+PD      +L    +     +    H +   +
Sbjct: 323 AIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKS 382

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+  +  V+N LIS Y++ + I+ A  +F++M  + +ITWN++I+G +  G     ++ F
Sbjct: 383 GLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELF 442

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
           SE+ M   +PD  T++  LS C ++ +LR G+ +H Y+L+NN+  +  +G A+I +Y+KC
Sbjct: 443 SEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKC 502

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G LD + +VF  + +    +WNA+IS Y+ +G    A  C+  +Q+ G +KPD+ TF  V
Sbjct: 503 GRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQG-LKPDKITFLGV 561

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L+AC+H GLV  G   F+ M  +YG +P+  H +C++ LLG+ G   EA   IN   IQ 
Sbjct: 562 LAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQP 621

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            S  W AL +AC     ++LG  +A  L          YVL+SN+YA  G W++ A +RE
Sbjct: 622 DSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVRE 681

Query: 716 LLKRTGVIKQPGCSWI 731
           ++K +G     GCS +
Sbjct: 682 MMKDSG---GDGCSGV 694



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 133/546 (24%), Positives = 241/546 (44%), Gaps = 47/546 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   S++G+   A+ LFV +   +  KP+  ++ + L +C        G  +H + +
Sbjct: 126 NVLICGYSQNGYLYHAIQLFVDMLREN-FKPNQTTIVSLLPSCGCFELIFQGRSIHGFGI 184

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +AG     H+ N ++S+Y    DL + + +F E+    V SW                  
Sbjct: 185 KAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSW------------------ 226

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                        N MI    +NG  D  I  F+EM K      + +  +++S       
Sbjct: 227 -------------NTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSAN----- 268

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
            F   +H  V K GF+   SVV +L+ +Y   G    A ++++       D I+   ++ 
Sbjct: 269 AFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYP--TKDLITLTAIIS 326

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
             +  G +E A+  F   +   ++P  +  + V+     P    +G   H   +KSG   
Sbjct: 327 SYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSN 386

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V+N  I++YS   +I+ A  +F  ++EK +++WN+MIS   Q      A+  + EM 
Sbjct: 387 DCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMS 446

Query: 382 SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G +PD  T  SLL+     G + + E +H+++  N +     +  ALI  Y+K  R+ 
Sbjct: 447 MCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLD 506

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F+N+    + TWN +I+G+ L G        +S+L    L+PD+ T    L++C 
Sbjct: 507 YAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACT 566

Query: 499 RISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISW 556
               +  G +    + K   L+  +     ++ L  K G    ++   N M I+ D+  W
Sbjct: 567 HGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVW 626

Query: 557 NALISA 562
            AL++A
Sbjct: 627 GALLNA 632



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 170/337 (50%), Gaps = 23/337 (6%)

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL-------CPRVG----YQVHAQAMKSGFEAYT 323
           AL+ FR +L A++ P+E TF  ++ A L       CP        Q+  Q +K G   + 
Sbjct: 32  ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFI 91

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  + I +Y   G    A  +F ++  +D+VSWN +I  Y+Q      AI  +++M   
Sbjct: 92  HVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRE 151

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
             +P++ T  SLL S G  E++     IH F    G   +  ++NAL+S YAK + ++ +
Sbjct: 152 NFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEAS 211

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  M  +++++WNT+I  +  NG   + + +F E+L     P   T+   +S+ A  
Sbjct: 212 QLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA-- 269

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
                 + +H YV+K    +  S+  +++ LYAK G  + + +++     KD I+  A+I
Sbjct: 270 ----FPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAII 325

Query: 561 SAYAQHGEGKEAVSCFKAMQDVG-RIKPDQATFTAVL 596
           S+Y++ G+ + AV CF  +Q +   IKPD      VL
Sbjct: 326 SSYSEKGDIESAVECF--IQTIQLDIKPDAVALIGVL 360



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 12/243 (4%)

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSL----LASSGFIE-------MVEMIHAFVFIN 415
           +N    A++ + ++    + P+EFTF  L    L+S  F             I       
Sbjct: 26  QNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKR 85

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+   I V  +LI  Y K      A  +F  MS R++++WN LI G+  NG+    +Q F
Sbjct: 86  GVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLF 145

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++L    +P++ T+   L SC     +  G+ IHG+ +K        L NA++++YAKC
Sbjct: 146 VDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKC 205

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
            DL+ S  +F+ M EK  +SWN +I  Y Q+G   +A+  FK M   G   P   T   +
Sbjct: 206 DDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEG-FHPSSVTIMNL 264

Query: 596 LSA 598
           +SA
Sbjct: 265 VSA 267



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 43/299 (14%)

Query: 12  GNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G +NT+K+L        L+ L   +++ S  G  + A+  F+Q      +KPD  +L   
Sbjct: 301 GFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQT-IQLDIKPDAVALIGV 359

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L    N  + A G   H Y +++GL     VAN ++SLY    ++ +   +F +++   +
Sbjct: 360 LHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPL 419

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            +W + +S C + G    A E                               LF EM   
Sbjct: 420 ITWNSMISGCVQAGKSSDAME-------------------------------LFSEMSMC 448

Query: 184 DVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
             + D  + AS+LS  C  G L  G  LHS + ++       +  ALI MY  CG +  A
Sbjct: 449 GKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYA 508

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            KVF   K       ++N ++ G +  G    A   +  +    L+P ++TF+ V++AC
Sbjct: 509 EKVFYNIKDPCL--ATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAAC 565



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 94/213 (44%), Gaps = 33/213 (15%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
            I A ++   +  ++ L+  N  ++   ++G   DA+ LF ++    K KPD  ++++ L
Sbjct: 403 EIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGK-KPDAITIASLL 461

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           + C  L N   G  LH+Y LR  ++    +   ++ +Y     L   ++VF  I++P + 
Sbjct: 462 SGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLA 521

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           +W                               NA+I+G +  G E    G + ++ +  
Sbjct: 522 TW-------------------------------NAIISGYSLYGLEHTAFGCYSKLQEQG 550

Query: 185 VRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTK 216
           ++ D  +F  VL+ C   GL+  G +  +++TK
Sbjct: 551 LKPDKITFLGVLAACTHGGLVYLGLEYFNIMTK 583


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 219/722 (30%), Positives = 345/722 (47%), Gaps = 97/722 (13%)

Query: 46  QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNA 105
           + H   +L P  Y     ++A  N RN     Q+HA A   G+     VAN ++  Y   
Sbjct: 72  KFHFLQRLNPKFY-----ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYY 126

Query: 106 RDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCT 165
           R L                               D A  +FD M  RD   ++ M+ G  
Sbjct: 127 RAL-------------------------------DDAYGLFDGMCVRDSVSWSVMVGGFA 155

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSV 225
           + G      G FRE+ +   R DNY+   V+  C        R L +L            
Sbjct: 156 KVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC--------RDLKNLQM---------- 197

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
             AL+ MY  C  + DA  +F++ +    D +++ VM+ G A  G+  E+L+ F  M   
Sbjct: 198 --ALVDMYVKCREIEDARFLFDKMQER--DLVTWTVMIGGYAECGKANESLVLFEKMREE 253

Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAM-----KSGFEAYTSVSNAAITMYSSCGKID 340
            + P ++  V+V+ AC   ++G    A+ +     +  F+    +  A I MY+ CG ++
Sbjct: 254 GVVPDKVAMVTVVFAC--AKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 311

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS- 399
            A  IF R++EK+++SW+ MI+ Y     GR A+  +  M S G+ PD+ T  SLL +  
Sbjct: 312 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACI 371

Query: 400 --GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
               +  V  +HA   ++G++ N+ V+N L+  Y+    +  AY +F  M  R+ ++W+ 
Sbjct: 372 NCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSV 431

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS-------------------------- 491
           ++ GF   G  +     F EL+    RPD YTL                           
Sbjct: 432 MVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVA 491

Query: 492 --VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               + +CA++ ++   + I  Y+ +      + LG AMI ++AKCG ++ +  +F+ M 
Sbjct: 492 MVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME 551

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           EK+ ISW+A+I+AY  HG+G++A+  F  M   G I P++ T  ++L ACSHAGLV++G 
Sbjct: 552 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG-ILPNKITLVSLLYACSHAGLVEEGL 610

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R F  M  DY       H +C++DLLGRAG LDEA ++I S  ++     W A   AC  
Sbjct: 611 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 670

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H ++ L    A  LLE +   P  Y+LLSNIYA AG WE+ A  R+L+ +  + K PG +
Sbjct: 671 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 730

Query: 730 WI 731
           WI
Sbjct: 731 WI 732


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 207/715 (28%), Positives = 351/715 (49%), Gaps = 47/715 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  LS +G + D L  +  + S+    PD ++  + + AC +L   + G   H   +
Sbjct: 17  NAIINRLSTAGAFCDVLLTYSSMLST-DTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G  +  ++A ++++ Y                               +K GH   A +
Sbjct: 76  VDGYSSDSYIATSLINFY-------------------------------SKFGHNQSARK 104

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD M DR++  +  MI   T  G  D+   ++  M +  ++  + +   +LS    G+L
Sbjct: 105 VFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS----GVL 160

Query: 205 EFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           E    + LH+ V + GF   V++ N+++ +Y  CG V DA  +FE       D IS+N +
Sbjct: 161 ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSL 218

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G A +G + E L     M    + P + TF S++SA        VG  VH   +++G 
Sbjct: 219 VSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL 278

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E  + +  + I MY  CG ++ A  IF  +  KD++SW  MIS   Q +    A+  +  
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M    + P   T  S+LA+    G   +   +H ++    I  +I   N+L++ YAK   
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++Q+  +F  MS R+I++WN +++G   NG   + L  F+E+  +  RPD  T+   L +
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA I +L  GK IH +V K+ L   + +  A++ +Y+KCGDL  + + F+ M ++D +SW
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           +++I+ Y  HG+G+ A+  +      G I+P+   + ++LSACSH GLVD G   F SM 
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTG-IQPNHVIYLSILSACSHNGLVDQGLSFFHSMT 577

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D+G  P  +H +C++DLL RAG ++EA         +   D    L  AC   GN+ LG
Sbjct: 578 KDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELG 637

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            I+A  ++  +      YV L++ YA+   W+    +   +K   + K PG S+I
Sbjct: 638 DIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 227/448 (50%), Gaps = 18/448 (4%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SYN +++ L++ G   + L+ +  ML     P   TF S++ AC    +   G   H + 
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G+ + + ++ + I  YS  G    A  +F  + ++++V W TMI  Y +      A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--IHAFVFINGIITNIQVSNALISAYA 432
             Y  M+  GI+P   T   LL  SG +E+V +  +HA V   G  +++ ++N++++ Y 
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL--SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  R++ A  +F  M  R++I+WN+L++G+   G   + LQ    +    + PD+ T   
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            +S+ A  S L  GK +HG++L+  L     +  ++I +Y KCG+++ + R+F  M+ KD
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKD 312

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ISW A+IS   Q+     AV+ F+ M    R+ P  AT  +VL+AC+  G    GT + 
Sbjct: 313 VISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 613 DSMVNDYGF--IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACA 668
             ++       IP+++ L  M     + G+L+++  V +     +R D  +W A+ S  A
Sbjct: 372 GYILRQRIKLDIPSQNSLVTM---YAKCGHLEQSCSVFDR---MSRRDIVSWNAIVSGHA 425

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVL 696
            +G+L    ++   + +  Q   S+ V+
Sbjct: 426 QNGHLCKALLLFNEMRKARQRPDSITVV 453



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/471 (23%), Positives = 219/471 (46%), Gaps = 46/471 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  ++ G+ ++ L L +++ +   ++PD  +  + ++A A       G  +H
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTD-GIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + LRAGL+   H+  +++ +Y    ++ S  R+F  + + DV SWT             
Sbjct: 271 GHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWT------------- 317

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  +N   D+ + +FR M K  V     + ASVL+ C 
Sbjct: 318 ------------------AMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACA 359

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G    G  +H  + +      +   N+L+TMY  CG++  +C VF+       D +S+
Sbjct: 360 ELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR--DIVSW 417

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
           N ++ G A  G + +AL+ F +M  A  RP  +T VS++ AC      +Q   +H    K
Sbjct: 418 NAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S       +  A + MYS CG +  A   F R+ ++D+VSW+++I+ Y     G +A+  
Sbjct: 478 SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRM 537

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYA 432
           Y +    GI+P+   + S+L++   +G ++  +   H+     GI   ++    ++   +
Sbjct: 538 YSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLS 597

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +  R+++AY  +  M P+  +     + G LL+     G     +++  E+
Sbjct: 598 RAGRVEEAYSFYKRMFPKPSMD----VLGILLDACRTTGNVELGDIVAREI 644


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 329/618 (53%), Gaps = 12/618 (1%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV+  T  ++  TK G +  A +VFD MP R +  +N+MI+  + +        +F+ M 
Sbjct: 194 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 253

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +   R D  +F S+L  C +   L+ G+ +   ++++ F   + V  ALITMY  C +  
Sbjct: 254 QEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 313

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA +VF   K    + I+++ ++   A  G   EAL  FR M    + P+ +TF+S+++ 
Sbjct: 314 DAAQVFGRMKQ--TNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNG 371

Query: 301 CLCPRVGYQ----VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
              P  G +    +H    + G +  T++ NA + +Y  C   D+A  +F +L+  +++S
Sbjct: 372 FTTPS-GLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLIS 430

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVF 413
           WN+MI  Y Q      A+  +  MQ  GI+PD   F ++L +          +++H  V 
Sbjct: 431 WNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVE 490

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +G+  +  V  +L++ YAK   +  A  I   M  + I  WN LING+ L+G   + L+
Sbjct: 491 ESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALE 550

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            + +L +  +  D+ T    L++C   +SL  GK IH   ++  L S + + NA+  +Y+
Sbjct: 551 AYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYS 610

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG ++ + R+F+ M  +  +SWN ++ AYAQHGE +E +   + M+  G +K +  TF 
Sbjct: 611 KCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG-VKLNGITFV 669

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           +VLS+CSHAGL+ +G + F S+ +D G     +H  C++DLLGRAG L EAE+ I+   +
Sbjct: 670 SVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPL 729

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +     W +L  AC    +L  G++ AG LLE +    S  V+LSNIY+  G W+ AA +
Sbjct: 730 EPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKL 789

Query: 714 RELLKRTGVIKQPGCSWI 731
           R  +    V K PG S I
Sbjct: 790 RRAMASRRVKKVPGISSI 807



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 178/659 (27%), Positives = 310/659 (47%), Gaps = 53/659 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           N+ ++  S    +Q+AL LF   H+     + P+  +L   L +C + R    G  +HA 
Sbjct: 27  NVMISAYSSYKSFQEALALF---HAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHAL 83

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +L  G      VA  +L++Y     L+  + VF E+   +V +W   L            
Sbjct: 84  SLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLG----------- 132

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDA 201
                        VY+  + GC       + + LF  M    V+ +  +F +VL SV D 
Sbjct: 133 -------------VYS--LQGCCWK----LAVELFTRMLLEGVKANVITFLNVLNSVVDP 173

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYN 260
             L  G+ +HS V +S  S  V V  AL+  Y  CG++ DA KVF+   G  C  + ++N
Sbjct: 174 DALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFD---GMPCRSVGTWN 230

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS 317
            M+   +   R  EA   F+ M     R   +TF+S++ AC+ P     G  V     ++
Sbjct: 231 SMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISET 290

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
            FE    V  A ITMY+ C   ++A  +F R+++ ++++W+ +I+ +A       A+  +
Sbjct: 291 SFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYF 350

Query: 378 LEMQSVGIRPDEFTFGSLLASSGF-----IEMVEMIHAFVFINGIITNIQVSNALISAYA 432
             MQ  GI P+  TF SLL  +GF     +E +  IH  +  +G+     + NAL++ Y 
Sbjct: 351 RMMQQEGILPNRVTFISLL--NGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYG 408

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           + E    A  +F  +   N+I+WN++I  ++        LQ F  +    ++PD      
Sbjct: 409 RCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMT 468

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L +C   S  R  K +H  V ++ L     +  +++ +YAK G+LD +  +   M E+ 
Sbjct: 469 ILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQ 528

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
             +WN LI+ YA HG  +EA+  ++ +Q +  I  D+ TF +VL+AC+ +  + +G  I 
Sbjct: 529 ITAWNVLINGYALHGRSREALEAYQKLQ-LEAIPVDKVTFISVLNACTSSTSLAEGKMIH 587

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            + V + G        + + ++  + G ++ A R+ +S  I++ + +W  +  A A HG
Sbjct: 588 SNAV-ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS-AVSWNGMLQAYAQHG 644



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 251/515 (48%), Gaps = 44/515 (8%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG++ DA   F + +    + +S+NVM+   +S    +EAL  F  ML+  + P+ 
Sbjct: 1   MYSRCGSLGDAVAAFGKIRAR--NVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNA 58

Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T V+V+++C   R    G  VHA +++ GF   T V+ A + MY  CG + +A  +F  
Sbjct: 59  ITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118

Query: 349 LQEKDIVSWNTMISTYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM 404
           + EK++V+WN M+  Y+ Q    + A+  +  M   G++ +  TF ++L S      +  
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRK 178

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + IH+ V  +    ++ V+ AL++ Y K   +  A ++F  M  R++ TWN++I+ + +
Sbjct: 179 GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 238

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           +    +    F  +     R D  T    L +C    +L+HGK +   + + +    + +
Sbjct: 239 SERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFV 298

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           G A+IT+YA+C   + + +VF  M + + I+W+A+I+A+A HG   EA+  F+ MQ  G 
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEG- 357

Query: 585 IKPDQATFTAVLSA-CSHAGL--------------VDDGTRIFDSMVNDYGFIPAEDHLS 629
           I P++ TF ++L+   + +GL              +DD T + +++VN YG   + D   
Sbjct: 358 ILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDAR 417

Query: 630 CMLDLLGRAGYL---------------DEAE---RVINSQHIQARSDNWWALFSACAAHG 671
            + D L     +               D+A    R +  Q IQ    N+  +  AC    
Sbjct: 418 TVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGS 477

Query: 672 NLRLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAG 705
           + R  +++   + E      P V   L N+YA AG
Sbjct: 478 HGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAG 512



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 144/347 (41%), Gaps = 41/347 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           + DAL LF  +     ++PD  +  T L AC    +      +H     +GL   P V  
Sbjct: 444 HDDALQLFRTMQQ-QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQT 502

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +++++Y  A +L   + +  E+    + +W   ++     G    A E + K+    +PV
Sbjct: 503 SLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPV 562

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
                                          D  +F SVL+ C +   L  G+ +HS   
Sbjct: 563 -------------------------------DKVTFISVLNACTSSTSLAEGKMIHSNAV 591

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           + G    V V NAL  MY  CG++ +A ++F+     +   +S+N M+   A  G  EE 
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP--IRSAVSWNGMLQAYAQHGESEEV 649

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           L   R M    ++ + +TFVSV+S+C    L        H+     G E  T      + 
Sbjct: 650 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 709

Query: 332 MYSSCGKIDEACMIFARLQ-EKDIVSWNTMI-STYAQRNLGRSAILA 376
           +    GK+ EA    +++  E  IV+W +++ +   Q++L R  + A
Sbjct: 710 LLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAA 756



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 34/222 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   +  G  ++AL  + ++     +  D  +  + L AC +  + A G  +H+ A+
Sbjct: 533 NVLINGYALHGRSREALEAYQKLQL-EAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 591

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL +   V N + ++Y     + + +R+F                             
Sbjct: 592 ECGLDSDVIVKNALTNMYSKCGSMENARRIF----------------------------- 622

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
             D MP R    +N M+    ++G  +  + L R+M +  V+ +  +F SVLS C  AGL
Sbjct: 623 --DSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGL 680

Query: 204 LEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           +  G Q  HSL    G          L+ +    G + +A K
Sbjct: 681 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 722


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 207/715 (28%), Positives = 351/715 (49%), Gaps = 47/715 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  LS +G + D L  +  + S+    PD ++  + + AC +L   + G   H   +
Sbjct: 17  NAIINRLSTAGAFCDVLLTYSSMLST-DTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVI 75

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G  +  ++A ++++ Y                               +K GH   A +
Sbjct: 76  VDGYSSDSYIATSLINFY-------------------------------SKFGHNQSARK 104

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD M DR++  +  MI   T  G  D+   ++  M +  ++  + +   +LS    G+L
Sbjct: 105 VFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLS----GVL 160

Query: 205 EFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           E    + LH+ V + GF   V++ N+++ +Y  CG V DA  +FE       D IS+N +
Sbjct: 161 ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSL 218

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G A +G + E L     M    + P + TF S++SA        VG  VH   +++G 
Sbjct: 219 VSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGL 278

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E  + +  + I MY  CG ++ A  IF  +  KD++SW  MIS   Q +    A+  +  
Sbjct: 279 EQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRR 338

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M    + P   T  S+LA+    G   +   +H ++    I  +I   N+L++ YAK   
Sbjct: 339 MLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGH 398

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++Q+  +F  MS R+I++WN +++G   NG   + L  F+E+  +  RPD  T+   L +
Sbjct: 399 LEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQA 458

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA I +L  GK IH +V K+ L   + +  A++ +Y+KCGDL  + + F+ M ++D +SW
Sbjct: 459 CASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSW 518

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           +++I+ Y  HG+G+ A+  +      G I+P+   + ++LSACSH GLVD G   F SM 
Sbjct: 519 SSIIAGYGSHGKGETALRMYSDFLHTG-IQPNHVIYLSILSACSHNGLVDQGLSFFHSMT 577

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D+G  P  +H +C++DLL RAG ++EA         +   D    L  AC   GN+ LG
Sbjct: 578 KDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELG 637

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            I+A  ++  +      YV L++ YA+   W+    +   +K   + K PG S+I
Sbjct: 638 DIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 227/448 (50%), Gaps = 18/448 (4%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           SYN +++ L++ G   + L+ +  ML     P   TF S++ AC    +   G   H + 
Sbjct: 15  SYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRV 74

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G+ + + ++ + I  YS  G    A  +F  + ++++V W TMI  Y +      A 
Sbjct: 75  IVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAF 134

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--IHAFVFINGIITNIQVSNALISAYA 432
             Y  M+  GI+P   T   LL  SG +E+V +  +HA V   G  +++ ++N++++ Y 
Sbjct: 135 SMYNIMRRQGIQPSSVTMLGLL--SGVLELVHLQCLHACVIQYGFGSDVALANSMLNVYC 192

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  R++ A  +F  M  R++I+WN+L++G+   G   + LQ    +    + PD+ T   
Sbjct: 193 KCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGS 252

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            +S+ A  S L  GK +HG++L+  L     +  ++I +Y KCG+++ + R+F  M+ KD
Sbjct: 253 LVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKD 312

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ISW A+IS   Q+     AV+ F+ M    R+ P  AT  +VL+AC+  G    GT + 
Sbjct: 313 VISWTAMISGLVQNDCADMAVTVFRRMLK-SRVMPSTATIASVLAACAELGSFPLGTSVH 371

Query: 613 DSMVNDYGF--IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACA 668
             ++       IP+++ L  M     + G+L+++  V +     +R D  +W A+ S  A
Sbjct: 372 GYILRQRIKLDIPSQNSLVTM---YAKCGHLEQSCSVFDR---MSRRDIVSWNAIVSGHA 425

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVL 696
            +G+L    ++   + +  Q   S+ V+
Sbjct: 426 QNGHLCKALLLFNEMRKARQRPDSITVV 453



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 207/438 (47%), Gaps = 42/438 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  ++ G+ ++ L L +++ +   ++PD  +  + ++A A       G  +H
Sbjct: 212 VISWNSLVSGYAQLGNIREVLQLLIRMKTD-GIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + LRAGL+   H+  +++ +Y    ++ S  R+F  + + DV SWT             
Sbjct: 271 GHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWT------------- 317

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  +N   D+ + +FR M K  V     + ASVL+ C 
Sbjct: 318 ------------------AMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACA 359

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G    G  +H  + +      +   N+L+TMY  CG++  +C VF+       D +S+
Sbjct: 360 ELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR--DIVSW 417

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
           N ++ G A  G + +AL+ F +M  A  RP  +T VS++ AC      +Q   +H    K
Sbjct: 418 NAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S       +  A + MYS CG +  A   F R+ ++D+VSW+++I+ Y     G +A+  
Sbjct: 478 SCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRM 537

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYA 432
           Y +    GI+P+   + S+L++   +G ++  +   H+     GI   ++    ++   +
Sbjct: 538 YSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLS 597

Query: 433 KNERIKQAYQIFHNMSPR 450
           +  R+++AY  +  M P+
Sbjct: 598 RAGRVEEAYSFYKRMFPK 615


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 214/691 (30%), Positives = 357/691 (51%), Gaps = 48/691 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD+ + S  L  C   R+   G  +H    ++ L+      N+++SLY           +
Sbjct: 64  PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123

Query: 115 FSEI-QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           F  +  + D+ SW+  +S           C   + M  R L  +  MI    ENGY    
Sbjct: 124 FQLMGSSRDLISWSAMVS-----------CFANNNMGFRALLTFVDMI----ENGYYP-- 166

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGF-SCLVSVVNALIT 231
                         + Y FA+    C  A  +  G  +   V K+G+    V V   LI 
Sbjct: 167 --------------NEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLID 212

Query: 232 MYFNC-GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           M+    G++V A KVFE+      + +++ +M+  L   G   EA+  F +M+++   P 
Sbjct: 213 MFVKGRGDLVSAFKVFEKMPER--NAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPD 270

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEACM 344
             T   V+SAC    +   G Q+H+QA++ G      V    I MY+ C   G +  A  
Sbjct: 271 RFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARK 330

Query: 345 IFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
           IF ++ + ++ SW  MI+ Y Q+      A+  +  M    + P+ FTF S L   A+  
Sbjct: 331 IFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            + + E +       G  +   V+N+LIS YA++ RI  A + F  +  +N+I++NT+I+
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVID 450

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
            +  N    + L+ F+E+    +    +T +  LS  A I ++  G+QIH  V+K+ L  
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
             S+ NA+I++Y++CG+++ + +VF  M +++ ISW ++I+ +A+HG   +A+  F  M 
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           + G ++P+  T+ AVLSACSH GLV++G + F SM  ++G IP  +H +CM+D+LGR+G 
Sbjct: 571 EEG-VRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGS 629

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L EA + INS   +A +  W     AC  HGNL LG+  A +++E+E   P+ Y+LLSN+
Sbjct: 630 LSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNL 689

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA+   W+E +NIR+ +K   +IK+ GCSW+
Sbjct: 690 YASTSKWDEVSNIRKAMKEKNLIKEAGCSWV 720



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 206/393 (52%), Gaps = 15/393 (3%)

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
           GR+ +A+     M+     P   T+   +  C+  R   +G  VH +  +S  +  +   
Sbjct: 45  GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104

Query: 327 NAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           N+ I++YS CG+ ++A  IF  +   +D++SW+ M+S +A  N+G  A+L +++M   G 
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKNE-RIKQA 440
            P+E+ F +     +++ F+ + + I  FV   G + +++ V   LI  + K    +  A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +++F  M  RN +TW  +I   +  G+  + +  F E+++S   PD +TLS  +S+CA +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC---GDLDCSLRVFNMMIEKDTISWN 557
             L  G+Q+H   +++ L     +G  +I +YAKC   G +  + ++F+ +++ +  SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 558 ALISAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           A+I+ Y Q G   +EA+  F+ M  +  + P+  TF++ L AC++   +  G ++F   V
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
              GF       + ++ +  R+G +D+A +  +
Sbjct: 404 K-LGFSSVNCVANSLISMYARSGRIDDARKAFD 435



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 132/508 (25%), Positives = 250/508 (49%), Gaps = 50/508 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L + G+  +A+ LF+++  S   +PD ++LS  ++ACAN+     G QLH+ A+R G
Sbjct: 243 ITRLMQFGYAGEAIDLFLEMILS-GYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301

Query: 88  LKAYPHVANTILSLYKNAR---DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           L     V   ++++Y        + + +++F +I + +V+SWT                 
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT----------------- 344

Query: 145 VFDKMPDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
                         AMITG  +  GY++  + LFR M    V  ++++F+S L  C +  
Sbjct: 345 --------------AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G Q+ +   K GFS +  V N+LI+MY   G + DA K F+    +  + ISYN +
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL--FEKNLISYNTV 448

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
           +D  A     EEAL  F ++    +  S  TF S++S          G Q+HA+ +KSG 
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +   SV NA I+MYS CG I+ A  +F  +++++++SW ++I+ +A+      A+  + +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M   G+RP+  T+ ++L++   + +V    +   +    +G+I  ++    ++    ++ 
Sbjct: 569 MLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSG 628

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            + +A Q  ++M  + + + W T +    ++G    G +H +++++ E  P +    + L
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELG-KHAAKMII-EQEPHDPAAYILL 686

Query: 495 SSC-ARISSLRHGKQIHGYVLKNNLISK 521
           S+  A  S       I   + + NLI +
Sbjct: 687 SNLYASTSKWDEVSNIRKAMKEKNLIKE 714



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 8/178 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   +++ + ++AL LF +I     +    ++ ++ L+  A++     G Q+H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEI-EDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  +++GLK    V N ++S+Y    ++ S  +VF ++++ +V SWT+ ++   K G   
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
            A E+F KM +     +L  Y A+++ C+  G  + G   F+ M   H +  R ++Y+
Sbjct: 561 QALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYA 618


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 203/613 (33%), Positives = 324/613 (52%), Gaps = 19/613 (3%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           +K G +  A ++FD+M +R +  YN +I+G    G+    IGLF E     ++ D +S+A
Sbjct: 55  SKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYA 114

Query: 194 SVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            VLS C   + +F  G+ +H L    G    V + N LI MY  C  +  A  +FE +  
Sbjct: 115 GVLSAC-GQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-----RV 306
              D++S+N ++ G A VG  EE L     M    LR +  T  S + +C          
Sbjct: 174 L--DNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY 231

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G  +H   +K G +    V  A + MY+  G + +A  +F     +++V +N MI+ + Q
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291

Query: 367 -----RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGII 418
                +     A+  + +MQ  GI+P +FTF S++     IE  E    IHA +  + I 
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQ 351

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           ++  + + LI  Y+     +   + F++    +I++W T+I G+  NG     L  F EL
Sbjct: 352 SDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYEL 411

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L S  +PDE+ ++  LS+CA +++ R G+Q+HGY +K  + +   + N+ I++YAK G+L
Sbjct: 412 LASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNL 471

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D +   F  +   D +SW+ +I + AQHG  K+A++ F+ M+  G I P+Q TF  VL+A
Sbjct: 472 DSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG-IHPNQITFLGVLTA 530

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSH GLV++G R ++SM  DY       H +C++DLL RAG L +A+  I +        
Sbjct: 531 CSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPV 590

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L S C  + ++  G+ +A  L+E +  + S YVLL NIY  AG+   A  IREL+K
Sbjct: 591 MWRTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMK 650

Query: 719 RTGVIKQPGCSWI 731
             G+ K+PG SWI
Sbjct: 651 DRGIRKEPGQSWI 663



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 165/315 (52%), Gaps = 11/315 (3%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G   HA  +K+ F     + N  + +YS  G++  A  +F R+ E+ ++S+N +IS Y  
Sbjct: 28  GKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDRMSERSVISYNILISGYGG 87

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQV 423
                 AI  + E +   ++ D+F++  +L++ G I+   + ++IH    + G+   + +
Sbjct: 88  MGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFL 147

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +N LI  Y K ERI  A  +F +    + ++WN+LI G+   G   + L+   ++  + L
Sbjct: 148 TNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGL 207

Query: 484 RPDEYTLSVALSSC--ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           R + +TL  AL SC     + + +GK +HGY +K  L   + +G A++ +YAK G L  +
Sbjct: 208 RLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDA 267

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGE-----GKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +++F     ++ + +NA+I+ + Q  +       EA+  F  MQ  G IKP   TF++++
Sbjct: 268 IQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQG-IKPSDFTFSSII 326

Query: 597 SACSHAGLVDDGTRI 611
             C+H    + G +I
Sbjct: 327 KICNHIEAFEYGKQI 341



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 43/288 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF Q+     +KP  ++ S+ +  C ++    +G Q+HA+  +  +++   + +T+
Sbjct: 302 EALKLFSQMQR-QGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + LY          + F+     D+ SWTT                              
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTT------------------------------ 390

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
            MI G  +NG  +  + LF E+     + D +   ++LS C D      G Q+H    K+
Sbjct: 391 -MIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKT 449

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G   L  V N+ I+MY   GN+  A   FEE K    D +S++VM+   A  G  ++A+ 
Sbjct: 450 GIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKN--PDVVSWSVMICSNAQHGHAKDAIN 507

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            F  M    + P+++TF+ V++AC         H   ++ G   Y S+
Sbjct: 508 LFELMKSYGIHPNQITFLGVLTAC--------SHGGLVEEGLRYYESM 547



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 26/269 (9%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K   +  A ++F  MS R++I++N LI+G+   GF  + +  FSE  M+ L+ D+++ 
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LS+C +I     GK IHG  +   L  ++ L N +I +Y KC  +D +  +F    E
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC--SHAGLVDDG 608
            D +SWN+LI+ YA+ G  +E +     M   G ++ +  T  + L +C  +   +V  G
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTG-LRLNAFTLGSALKSCYLNLNNMVSYG 232

Query: 609 TRIFDSMVN---DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
             +    V    D   +      + +LD+  + GYL +A        IQ        LF 
Sbjct: 233 KTLHGYTVKQGLDLDIVVG----TALLDMYAKTGYLGDA--------IQ--------LFR 272

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
                  +    +IAG +   + DK   Y
Sbjct: 273 TSPNQNVVMYNAMIAGFIQTEDIDKECAY 301



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 5/173 (2%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           ++T K  ++     +A  +++G ++ AL LF ++ +S K KPD + ++T L+ACA++   
Sbjct: 378 NSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGK-KPDEFIITTMLSACADVAAE 436

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+H YA++ G+     V N+ +S+Y  + +L S K  F EI+NPDV SW+  + + 
Sbjct: 437 RSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSN 496

Query: 134 TKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
            + GH   A  +F+ M    +      +  ++T C+  G  + G+  +  M K
Sbjct: 497 AQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKK 549



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           YT  V  SS  +  S  HGK  H +++K      + L N  + LY+K G++  + ++F+ 
Sbjct: 12  YTKLVQFSS--KSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLFDR 69

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           M E+  IS+N LIS Y   G   +A+  F   + +  +K D+ ++  VLSAC
Sbjct: 70  MSERSVISYNILISGYGGMGFYHKAIGLFSEAR-MACLKLDKFSYAGVLSAC 120


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 212/703 (30%), Positives = 348/703 (49%), Gaps = 78/703 (11%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G Y  AL  +  + +S  L P+ +++   +A+CA L    +G  +H    + GL +   
Sbjct: 111 NGEYSRALDFYQWMRASEAL-PNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSS 169

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
              +                              +F+   +K G ++ A  VFD++  RD
Sbjct: 170 AVGS------------------------------SFVYMYSKCGVLEEAYGVFDEILFRD 199

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKL--DVRRDNY-SFASVLSVC-DAGLLEFGRQ 209
           +  + A++ GC +NG   +G+    EMH++  D  R N+ +       C + G L  GR 
Sbjct: 200 VVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRC 259

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH LV K+G      V + L++MY  CGN  +A + F E      D IS+  M+   + +
Sbjct: 260 LHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNK--DIISWTSMISAYSRM 317

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV---HAQAMKSGFEAYTSVS 326
           G   E +  F +MLV+ + P  +    ++S+       ++    H   ++  +     V 
Sbjct: 318 GWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQ 377

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ++MY   G +  A   F R+ E++  +WN M+S Y   +L RS              
Sbjct: 378 NALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARS-------------- 423

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
                                IH ++  N +  N+ V+N+LI  Y K+  +  A +IF  
Sbjct: 424 ---------------------IHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCR 462

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           + PR+I+TWNTLI+ +   G   + L  + ++++ +L+P+  TL   LS+C+ ++SL  G
Sbjct: 463 I-PRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEG 521

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +++H Y+        +S+  A+I +YAKCG L+ S  +FN M E+D I+WN +IS Y  H
Sbjct: 522 EKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMH 581

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G+ + A+  F+ M++    KP+  TF AVLSAC+HAGLV +G  +F  M  DY   P   
Sbjct: 582 GDARSAIEFFQQMEE-SSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKM-QDYSVAPNLK 639

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +CM+DLLGR+G L EAE ++ S  I      W AL S+C  H  + +G  IA   ++ 
Sbjct: 640 HYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDS 699

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + +    YV++SN+Y++ G WEEA   R ++K  GV K+ G S
Sbjct: 700 DVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWS 742



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 266/572 (46%), Gaps = 56/572 (9%)

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
           E+FD++P RD  ++N++I     NG     +  ++ M   +   ++++   +++ C +  
Sbjct: 88  ELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELE 147

Query: 203 LLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           L+ +GR +H LV+K G FS   +V ++ + MY  CG + +A  VF+E      D +++  
Sbjct: 148 LVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEI--LFRDVVAWTA 205

Query: 262 MMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAM 315
           ++ G    G  +   E L     +     RP+  T      AC  L   + G  +H   +
Sbjct: 206 LVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVV 265

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+G +    V +  ++MYS CG  +EA   F  +  KDI+SW +MIS Y++       I 
Sbjct: 266 KTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECID 325

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + EM   GI PD      +L+S   S  +   +  H  +       +  V NAL+S Y 
Sbjct: 326 MFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYC 385

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +K A + F  ++ +N   WN +++G+        G  H +                
Sbjct: 386 KFGFLKLAEKFFGRVNEQNFEAWNLMVSGY--------GATHLA---------------- 421

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
                         + IH Y++KN +   +S+ N++I +Y K G+L  + R+F   I +D
Sbjct: 422 --------------RSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIF-CRIPRD 466

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ++WN LIS+YA  G   EA+S +  M  +  +KP+ AT  +VLSACSH   +++G ++ 
Sbjct: 467 IVTWNTLISSYAHCGHFAEALSLYDKMV-LEDLKPNSATLVSVLSACSHLASLEEGEKVH 525

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +  +N   F       + ++D+  + G L+++  + NS H +     W  + S    HG+
Sbjct: 526 N-YINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGYGMHGD 583

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
            R   I     +E    KP+    L+ + A A
Sbjct: 584 AR-SAIEFFQQMEESSAKPNGLTFLAVLSACA 614



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/518 (22%), Positives = 227/518 (43%), Gaps = 42/518 (8%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q H+ +  SG+S  + + + LI++Y +      + ++F+E      D   +N ++    S
Sbjct: 53  QSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHR--DAFLWNSIIKAHFS 110

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTS 324
            G    AL  ++ M  +   P+  T   ++++C        G  +H    K G F   ++
Sbjct: 111 NGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSA 170

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V ++ + MYS CG ++EA  +F  +  +D+V+W  ++    Q    +  +    EM  +G
Sbjct: 171 VGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIG 230

Query: 385 ---IRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               RP+  T  G   A      ++E   +H  V   G+  +  V + L+S Y+K    +
Sbjct: 231 GDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPE 290

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +A++ F  +  ++II+W ++I+ +   G+  + +  F E+L+S + PD   +S  LSS +
Sbjct: 291 EAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFS 350

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
               +   K  HG +++ +      + NA++++Y K G L  + + F  + E++  +WN 
Sbjct: 351 NSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNL 410

Query: 559 LISAYAQHGEGK------------EAVSCFKAMQDV--------------GRIKPDQATF 592
           ++S Y      +            E VS   ++ D+               RI  D  T+
Sbjct: 411 MVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDIVTW 470

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---IN 649
             ++S+ +H G   +   ++D MV +    P    L  +L        L+E E+V   IN
Sbjct: 471 NTLISSYAHCGHFAEALSLYDKMVLE-DLKPNSATLVSVLSACSHLASLEEGEKVHNYIN 529

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
               +       AL    A  G L   R I   + ER+
Sbjct: 530 GGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERD 567



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 197/408 (48%), Gaps = 20/408 (4%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q HA  + SG+     +++  I++Y+S  K   +  +F  +  +D   WN++I  +    
Sbjct: 53  QSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNG 112

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ-VS 424
               A+  Y  M++    P+ FT   ++AS   +E+V     IH  V   G+ +    V 
Sbjct: 113 EYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVG 172

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM---S 481
           ++ +  Y+K   +++AY +F  +  R+++ W  L+ G + NG    GL+   E+      
Sbjct: 173 SSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGD 232

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             RP+  TL     +C  + +L  G+ +HG V+K  +     + + ++++Y+KCG+ + +
Sbjct: 233 GERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEA 292

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            R F  ++ KD ISW ++ISAY++ G   E +  F  M  V  I PD    + +LS+ S+
Sbjct: 293 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEML-VSGIYPDGIVISCMLSSFSN 351

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSD 658
           +  V +  + F  ++    +   +   + +L +  + G+L  AE+    +N Q+ +A   
Sbjct: 352 SMRVFE-AKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEA--- 407

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKP-SVYVLLSNIYAAAG 705
             W L    + +G   L R I   +++   D+  SV   L ++Y  +G
Sbjct: 408 --WNLM--VSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSG 451



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 17/220 (7%)

Query: 468 PVQGLQHFSELLMSEL--------RPDEYT-LSVALSSCARISSLRHGKQIHGYVLKNNL 518
           P    +H S LL   L         P+++  L+  LS+  +ISSL+   Q H +++ +  
Sbjct: 6   PTHLFKHCSSLLQQRLYCSPTWSHEPNDFNYLNHLLSN--QISSLKTLLQSHAFIITSGY 63

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            + + + + +I+LYA      CS  +F+ +  +D   WN++I A+  +GE   A+  ++ 
Sbjct: 64  SNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQW 123

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGR 637
           M+      P+  T   ++++C+   LV+ G R    +V+  G       + S  + +  +
Sbjct: 124 MR-ASEALPNHFTIPMIVASCAELELVNYG-RSIHGLVSKLGLFSGSSAVGSSFVYMYSK 181

Query: 638 AGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLRLG 676
            G L+EA  V +   I  R    W AL   C  +G  ++G
Sbjct: 182 CGVLEEAYGVFDE--ILFRDVVAWTALVIGCVQNGESKMG 219



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 139/343 (40%), Gaps = 83/343 (24%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +++ +  GH+ +AL L+ ++     LKP+  +L + L+AC++L +   G ++H
Sbjct: 467 IVTWNTLISSYAHCGHFAEALSLYDKM-VLEDLKPNSATLVSVLSACSHLASLEEGEKVH 525

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y      +    +A  ++ +Y     L   + +F+ +   DV +W              
Sbjct: 526 NYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITW-------------- 571

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                            N MI+G   +G     I  F++M +   + +  +F +VLS C 
Sbjct: 572 -----------------NVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACA 614

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AGL++ G+ L                          G + D   V    K Y C     
Sbjct: 615 HAGLVKEGKYLF-------------------------GKMQDY-SVAPNLKHYAC----- 643

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASL--RPSELTFVSVMSACLCP---RVGYQVHAQA 314
             M+D L   G ++EA     + LV S+   P    + +++S+C       +G ++   A
Sbjct: 644 --MVDLLGRSGNLQEA-----EALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHA 696

Query: 315 MKSGFEA---YTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + S  E    Y  +SN    MYSS GK +EA      ++E+ +
Sbjct: 697 IDSDVENDGYYVMISN----MYSSIGKWEEAEKARGIMKERGV 735


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 203/622 (32%), Positives = 332/622 (53%), Gaps = 17/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DVY+    L+   K   +  A  +FD+MP RD   +N MI G    G  +    + R M 
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 D Y+F S+L  +  AG+   G+Q+HS++ K G++  V   +AL+ MY  C  + 
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-- 298
           DA   F     +  + +S+N M++G A  G  E A      M     +  + T+  ++  
Sbjct: 152 DAYLSFLSISKH--NTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPL 209

Query: 299 --SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIV 355
              A  C  +  Q+H + +K G E   ++ NA IT YS CG +D+A  IF +    +D+V
Sbjct: 210 LDDADFC-NLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLV 268

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAF 411
           +WN++++ Y  R+    A    ++MQ  G  PD +++ S++ S+ F E +      +H  
Sbjct: 269 TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSII-SACFNENISNNGRSLHGL 327

Query: 412 VFINGIITNIQVSNALISAYAKNE--RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           V   G   ++ +SNALIS Y K++   +K+A  IF ++  ++ ++WN+++ G    G   
Sbjct: 328 VIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSE 387

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             ++ F  +  + +  D Y+ S  L SC+ +++ + G+QIH   LK  L S   + +++I
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y+KCG ++ + R F    +  +I+WNAL+  YAQHG+   A+  F  M++  ++K D 
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEE-KKVKMDH 506

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF AVL+ACSH GLV+ G +    M +DYG  P  +H +C +DL GR+G L+EA+ +I 
Sbjct: 507 ITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIE 566

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
               +  +  W     AC + GN+ L   +AG LLE E ++   YVLLSN+Y     W+E
Sbjct: 567 EMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDE 626

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
            A ++ L+K  GV K PG SWI
Sbjct: 627 KAKVKRLMKERGVKKVPGWSWI 648



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 231/486 (47%), Gaps = 14/486 (2%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           HSL  K G    V   N ++  Y+ C  +  A  +F+E    + D +S+N M+ G  + G
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP--MRDSVSWNTMIAGHINCG 78

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            +E +    R M          TF S++          +G QVH+  +K G+       +
Sbjct: 79  NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+ C K+++A + F  + + + VSWN MI+ YAQ     +A      M+  G + 
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198

Query: 388 DEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ T+  LL     + F  +   +H  +  +G+     + NALI++Y+K   +  A +IF
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 445 HNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
            + +  R+++TWN+L+  +LL        +   ++      PD Y+ +  +S+C   +  
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKC--GDLDCSLRVFNMMIEKDTISWNALIS 561
            +G+ +HG V+K      + + NA+I++Y K   G +  +L +F  +  KD +SWN++++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
             +Q G  ++AV  F  M+    +  D  +F+AVL +CS       G +I   +   YG 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAA-MDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYGL 436

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
              E   S ++ +  + G +++A R    +  +  S  W AL    A HG   +   +  
Sbjct: 437 ESNEFVSSSLIFMYSKCGIIEDARRSFE-EASKNSSITWNALMFGYAQHGQCNVALDLFF 495

Query: 682 LLLERE 687
           L+ E++
Sbjct: 496 LMEEKK 501



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 199/441 (45%), Gaps = 48/441 (10%)

Query: 70  LRNAAFGN---QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           L +A F N   QLH   ++ GL+    + N +++ Y     L   KR+F           
Sbjct: 210 LDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF----------- 258

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
                        D +  +      RDL  +N+++        ED+   L  +M +    
Sbjct: 259 -------------DSSAGI------RDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF--NCGNVVDAC 243
            D YS+ S++S C +  +   GR LH LV K GF   V + NALI+MY   + G++ +A 
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEAL 359

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-- 301
            +FE  +    D +S+N ++ GL+  G  E+A+  F  M  A++     +F +V+ +C  
Sbjct: 360 CIFESLE--FKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               ++G Q+H  A+K G E+   VS++ I MYS CG I++A   F    +   ++WN +
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI----NG 416
           +  YAQ      A+  +  M+   ++ D  TF ++L +   I +VE    F+       G
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYG 537

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHF 475
           +   ++     +  Y ++ R+++A  +   M  + +   W T +      G      Q  
Sbjct: 538 VPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVA 597

Query: 476 SELLMSELRPDEYTLSVALSS 496
             LL  E+ P+E+   V LS+
Sbjct: 598 GHLL--EMEPEEHCTYVLLSN 616



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 50/361 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A  L + +   H  +PD+YS ++ ++AC N   +  G  LH   ++ G +    ++N ++
Sbjct: 286 AFKLLIDMQE-HGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALI 344

Query: 100 SLYKNARDLVSVKR---VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           S+Y  + D  S+K    +F  ++  D  SW                              
Sbjct: 345 SMYLKS-DYGSMKEALCIFESLEFKDRVSW------------------------------ 373

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            N+++TG ++ G  +  +  F  M    +  D+YSF++VL  C D    + G+Q+H L  
Sbjct: 374 -NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL 432

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G      V ++LI MY  CG + DA + FEEA       I++N +M G A  G+   A
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKN--SSITWNALMFGYAQHGQCNVA 490

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA----QAMKSGFEAYTSVSN--AA 329
           L  F  M    ++   +TFV+V++A  C  +G         + M+S +     + +   A
Sbjct: 491 LDLFFLMEEKKVKMDHITFVAVLTA--CSHIGLVEQGCKFLRCMESDYGVPPRMEHYACA 548

Query: 330 ITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           + +Y   G+++EA  +   +  K D   W T +   A R+ G   +   +    + + P+
Sbjct: 549 VDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLG--ACRSCGNIELACQVAGHLLEMEPE 606

Query: 389 E 389
           E
Sbjct: 607 E 607



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 12/228 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L  LS++G  +DA+  F+ + S+  +  D YS S  L +C++L     G Q+H  AL
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL 432

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL++   V+++++ +Y     +   +R F E       +W   +    + G  + A +
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALD 492

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLS 197
           +F  M ++    D   + A++T C+  G  + G    R M   + +  R ++Y+ A  L 
Sbjct: 493 LFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDL- 551

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              +G LE   +  +L+ +  F    +V    +    +CGN+  AC+V
Sbjct: 552 YGRSGRLE---EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQV 596


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 214/691 (30%), Positives = 357/691 (51%), Gaps = 48/691 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD+ + S  L  C   R+   G  +H    ++ L+      N+++SLY           +
Sbjct: 64  PDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSI 123

Query: 115 FSEI-QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           F  +  + D+ SW+  +S           C   + M  R L  +  MI    ENGY    
Sbjct: 124 FRLMGSSRDLISWSAMVS-----------CFANNNMGFRALLTFVDMI----ENGYYP-- 166

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGF-SCLVSVVNALIT 231
                         + Y FA+    C  A  +  G  +   V K+G+    V V   LI 
Sbjct: 167 --------------NEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLID 212

Query: 232 MYFNC-GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           M+    G++V A KVFE+      + +++ +M+  L   G   EA+  F DM+ +   P 
Sbjct: 213 MFVKGRGDLVSAFKVFEKMPER--NAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPD 270

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEACM 344
             T   V+SAC    +   G Q+H+QA++ G      V    I MY+ C   G +  A  
Sbjct: 271 RFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARK 330

Query: 345 IFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
           IF ++ + ++ SW  MI+ Y Q+      A+  +  M    + P+ FTF S L   A+  
Sbjct: 331 IFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            + + E +       G  +   V+N+LIS YA++ RI  A + F  +  +N+I++NT+I+
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVID 450

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
            +  N    + L+ F+E+    +    +T +  LS  A I ++  G+QIH  V+K+ L  
Sbjct: 451 AYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKL 510

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
             S+ NA+I++Y++CG+++ + +VF  M +++ ISW ++I+ +A+HG   +A+  F  M 
Sbjct: 511 NQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKML 570

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           + G ++P++ T+ AVLSACSH GLV++G + F SM  ++G IP  +H +C++D+LGR+G 
Sbjct: 571 EEG-VRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGS 629

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L EA + INS   +A +  W     AC  HGNL LG+  A +++E+E   P+ Y+LLSN+
Sbjct: 630 LSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNL 689

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA+   W+E +NIR+ +K   +IK+ GCSW+
Sbjct: 690 YASISKWDEVSNIRKAMKEKXLIKEAGCSWV 720



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 205/393 (52%), Gaps = 15/393 (3%)

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
           GR+ +A+     M+     P   T+   +  C+  R   +G  VH +  +S  +  +   
Sbjct: 45  GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104

Query: 327 NAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           N+ I++YS CG+ ++A  IF  +   +D++SW+ M+S +A  N+G  A+L +++M   G 
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKNE-RIKQA 440
            P+E+ F +     +++ F+ + + I  FV   G + +++ V   LI  + K    +  A
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +++F  M  RN +TW  +I   +  G+  + +  F +++ S   PD +TLS  +S+CA +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC---GDLDCSLRVFNMMIEKDTISWN 557
             L  G+Q+H   +++ L     +G  +I +YAKC   G +  + ++F+ +++ +  SW 
Sbjct: 285 ELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344

Query: 558 ALISAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           A+I+ Y Q G   +EA+  F+ M  +  + P+  TF++ L AC++   +  G ++F   V
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMI-LTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAV 403

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
              GF       + ++ +  R+G +D+A +  +
Sbjct: 404 K-LGFSSVNCVANSLISMYARSGRIDDARKAFD 435



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 241/482 (50%), Gaps = 49/482 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L + G+  +A+ LF+ +  S   +PD ++LS  ++ACAN+     G QLH+ A+R G
Sbjct: 243 ITRLMQFGYAGEAIDLFLDMIFS-GYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG 301

Query: 88  LKAYPHVANTILSLYKNAR---DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           L     V   ++++Y        + + +++F +I + +V+SWT                 
Sbjct: 302 LTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT----------------- 344

Query: 145 VFDKMPDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
                         AMITG  +  GY++  + LFR M    V  ++++F+S L  C +  
Sbjct: 345 --------------AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLA 390

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G Q+ +   K GFS +  V N+LI+MY   G + DA K F+    +  + ISYN +
Sbjct: 391 ALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL--FEKNLISYNTV 448

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
           +D  A     EEAL  F ++    +  S  TF S++S          G Q+HA+ +KSG 
Sbjct: 449 IDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL 508

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +   SV NA I+MYS CG I+ A  +F  +++++++SW ++I+ +A+      A+  + +
Sbjct: 509 KLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHK 568

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M   G+RP+E T+ ++L++   + +V    +   +    +G+I  ++    ++    ++ 
Sbjct: 569 MLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSG 628

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            + +A Q  ++M  + + + W T +    ++G    G +H +++++ E  P +    + L
Sbjct: 629 SLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELG-KHAAKMII-EQEPHDPAAYILL 686

Query: 495 SS 496
           S+
Sbjct: 687 SN 688



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   +++ + ++AL LF +I     +    ++ ++ L+  A++     G Q+H
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEI-EDQGMGASAFTFASLLSGAASIGTIGKGEQIH 500

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  +++GLK    V N ++S+Y    ++ S  +VF ++++ +V SWT+ ++   K G   
Sbjct: 501 ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFAT 560

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
            A E+F KM +  +      Y A+++ C+  G  + G   F+ M   H +  R ++Y+
Sbjct: 561 QALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYA 618


>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Vitis vinifera]
          Length = 708

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/719 (28%), Positives = 360/719 (50%), Gaps = 43/719 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+   + ++   ++G ++  L +++++  +  L P+ ++L     ACA L     G  +H
Sbjct: 23  LVSWTLVVSGAVQNGEFEMGLGVYLEMIRT-GLVPNEFALGCVTKACAALGGKELGLCVH 81

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +AL+ G++  P V ++IL++Y                                K+G ++
Sbjct: 82  CFALKVGMEKNPFVGSSILNMY-------------------------------AKLGDIE 110

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  VF+ M +  +  +NAMI G  +  Y    + +   M    +  D ++F + L  C 
Sbjct: 111 DAERVFECMDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCL 170

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L FGRQ+H L+ +S      +V+N+L+ MYF  G  + A KVF+  +    D IS+
Sbjct: 171 VVGNLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDK--DIISW 228

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
           N +  GL+      E    F  +++  L+P+ +TF  +   C   L    G Q H  A +
Sbjct: 229 NTVFAGLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFR 288

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G     SV+++ I M+S CG +  AC++F     K I + N MIS Y        A+  
Sbjct: 289 FGISDEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNL 348

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  +  +G+  DE TF S L +    E   +   +H  +  +G  +   V ++L+  Y  
Sbjct: 349 FCNLNGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVG 408

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +  +++ F+ +   ++++W  +I+  +  G+  + +   + L  +  +PDE+     
Sbjct: 409 FGLLDDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSI 468

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KD 552
            + CA I++ R  K +H  V+K    + + + +A+I  YAKCGD++ + RVF+     +D
Sbjct: 469 FNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRD 528

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            I +N ++ AYA HG  +EAV  F+ M+ +  ++P QATF +V+SACSH GLV+ G   F
Sbjct: 529 VILFNTMVMAYAHHGLVREAVETFEKMK-LATLEPSQATFVSVISACSHLGLVEQGDIFF 587

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            SM  DYG  P+ D+  C++DL  R G+L++A+ +I +         W +L + C  HGN
Sbjct: 588 KSMNLDYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGN 647

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LG   A  LL+   +  + YVLLS +Y+  G W +AA +R+ +   G+ K PGCSWI
Sbjct: 648 KELGEWAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 706



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 256/528 (48%), Gaps = 21/528 (3%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           TK G +    +VF +MP ++L  +  +++G  +NG  ++G+G++ EM +  +  + ++  
Sbjct: 3   TKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALG 62

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            V   C A G  E G  +H    K G      V ++++ MY   G++ DA +VFE     
Sbjct: 63  CVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNL 122

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQ 309
           V     +N M+ G A      E+L     M    +     TF++ +  CL       G Q
Sbjct: 123 VVG--CWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   ++S     T+V N+ + MY   G    A  +F RLQ+KDI+SWNT+ +  +Q + 
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDD 240

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMI-----HAFVFINGIITNIQVS 424
            R     + ++   G++P+  TF  L    G  E ++++     H   F  GI     V+
Sbjct: 241 AREIGRFFHKLMLTGLKPNCVTFSILFRFCG--EALDLVSGLQFHCLAFRFGISDEASVT 298

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           ++LI+ +++   ++ A  +F +   ++I T N +I+G+ LN    + L  F  L    L 
Sbjct: 299 SSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLE 358

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            DE T S AL +C R  + + G+Q+HG ++K+   S+  + ++++  Y   G LD S   
Sbjct: 359 ADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEF 418

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           FN +   D +SW A+ISA    G   EA+     +++ G  KPD+  F ++ + C+    
Sbjct: 419 FNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGG-KPDEFIFGSIFNCCAGIAA 477

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVIN 649
               T+   S+V   G+   E H+   S ++D   + G ++ A RV +
Sbjct: 478 YRQ-TKSVHSLVVKMGY---EAHVFVASAVIDAYAKCGDIENARRVFD 521



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 223/502 (44%), Gaps = 22/502 (4%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG +    KVF E    + + +S+ +++ G    G  E  L  + +M+   L P+E
Sbjct: 1   MYTKCGFLAGGLKVFGEMP--MKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNE 58

Query: 292 LTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
                V  AC       +G  VH  A+K G E    V ++ + MY+  G I++A  +F  
Sbjct: 59  FALGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFEC 118

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMV 405
           +    +  WN MI  YAQ + G  ++     MQ  GI  D FTF + L      G +   
Sbjct: 119 MDNLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFG 178

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             IH  +  + +  +  V N+L+  Y KN     A ++F  +  ++II+WNT+  G    
Sbjct: 179 RQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQG 238

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               +  + F +L+++ L+P+  T S+    C     L  G Q H    +  +  + S+ 
Sbjct: 239 DDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVT 298

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +++I ++++CG +  +  VF+    K   + N +IS Y  +    EA++ F  +  +G +
Sbjct: 299 SSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLG-L 357

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           + D+ TF++ L AC        G ++  ++V   GF       S +L      G LD++ 
Sbjct: 358 EADECTFSSALEACFRTENQKLGRQMHGTIVKS-GFASQGYVCSSLLKCYVGFGLLDDSF 416

Query: 646 RVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIY 701
              N      R D  +W A+ SA    G         GLL  L+    KP  ++  S   
Sbjct: 417 EFFNGVE---RLDLVSWGAMISALVHKG---YSSEAIGLLNRLKEAGGKPDEFIFGSIFN 470

Query: 702 AAAGL--WEEAANIRELLKRTG 721
             AG+  + +  ++  L+ + G
Sbjct: 471 CCAGIAAYRQTKSVHSLVVKMG 492


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 204/659 (30%), Positives = 340/659 (51%), Gaps = 13/659 (1%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           L A  ++ G     +  N  L    ++  L   + +F ++ + +++S    LSA +  G 
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +  A  +F   P R+   +  M+      G     + LFR M    V  D  +  +VL++
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
               +      LH    K G    V V N L+  Y   G +  A +VF E      D ++
Sbjct: 150 PGCTV----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDK--DAVT 203

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAM 315
           YN MM G +  G   +AL  F  M  A +  +  TF S+++         +G+QVHA  +
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +S       V+N+ +  YS C  +D+   +F  + E+D VS+N +I+ YA      + + 
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYA 432
            + EMQ +G       + ++L+ +G +  V +   IHA + + G+ +   + NALI  Y+
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 383

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +  A   F N S ++ I+W  LI G++ NG   + LQ FS++  + LRPD  T S 
Sbjct: 384 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            + + + ++ +  G+Q+H Y++++   S +  G+ ++ +YAKCG LD +LR F+ M E++
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
           +ISWNA+ISAYA +GE K A+  F+ M   G   PD  TF +VL+ACSH GL D+  + F
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYF 562

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             M + Y   P ++H +C++D LGR G   + ++++     +A    W ++  +C  HGN
Sbjct: 563 HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGN 622

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L R+ A  L   E    + YV+LSNIYA AG WE+AA ++++++  GV K+ G SW+
Sbjct: 623 QELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWV 681



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 269/616 (43%), Gaps = 80/616 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFV--------------QIHSSHKLKPDIYSL------ 60
           +  LN+ L+  S SG    A HLF+              + H++     D  SL      
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 61  ------STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
                   T+    NL      + LH +A++ GL  +  V NT+L  Y     L + +RV
Sbjct: 134 EGVIPDRVTVTTVLNLPGCTVPS-LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+ + D  ++   +  C+K                                G     +
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSK-------------------------------EGLHTQAL 221

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITM 232
            LF  M +  +   +++F+S+L+V  AG+  L  G Q+H+LV +S     V V N+L+  
Sbjct: 222 QLFAAMRRAGIPATHFTFSSILTVA-AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF 280

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C  + D  ++F+E      D++SYNV++   A        L  FR+M         L
Sbjct: 281 YSKCDCLDDMRRLFDEMPER--DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 338

Query: 293 TFVSVMS-ACLCP--RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
            + +++S A   P   +G Q+HAQ +  G  +   + NA I MYS CG +D A   F+  
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-- 407
            EK  +SW  +I+ Y Q      A+  + +M+  G+RPD  TF S++ +S  + M+ +  
Sbjct: 399 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 458

Query: 408 -IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H+++  +G  +++   + L+  YAK   + +A + F  M  RN I+WN +I+ +   G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLG 525
                ++ F  +L     PD  T    L++C+  + L      + +++K+   IS     
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEH 577

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE----KDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
            A +      G + C  +V  M++E     D I W +++ +   HG  + A     A   
Sbjct: 578 YACVI--DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV---AADK 632

Query: 582 VGRIKPDQATFTAVLS 597
           +  ++P  AT   +LS
Sbjct: 633 LFGMEPTDATPYVILS 648



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 5/171 (2%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SN S++  +     +    ++G +++AL LF  +  +  L+PD  + S+ + A ++L   
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA-GLRPDRATFSSIIKASSSLAMI 454

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G QLH+Y +R+G K+     + ++ +Y     L    R F E+   +  SW   +SA 
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514

Query: 134 TKMGHVDYACEVFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREM 180
              G    A ++F+ M     + D   + +++  C+ NG  D  +  F  M
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 565


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 213/631 (33%), Positives = 320/631 (50%), Gaps = 81/631 (12%)

Query: 180 MHKLDVRRDNY-----SFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMY 233
           M K  + RD Y      FA +L  C       G R +H+ +  + FS  + + N LI +Y
Sbjct: 1   MAKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60

Query: 234 FNCGNVVDACKVFEE-----------------AKGYV------------CDHISYNVMMD 264
             C  + DA K+F+                    G++             D  S+N M+ 
Sbjct: 61  GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEA 321
           G A   R EE+L  F  M       +E +F S +SAC   +   +G QVHA   KS +  
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              + +A I MYS CG +  A  +F+ + E+++V+WN++I+ Y Q      A+  ++ M 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF-INGIITNIQVSNALISAYAKNERI 437
             G+ PDE T  S++++   +  ++    IHA V   N    ++ + NAL+  YAK  ++
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 438 KQAYQIFHNMS-------------------------------PRNIITWNTLINGFLLNG 466
            +A ++F  MS                                RN+++WN LI G+  NG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------S 520
              + L+ F  L    + P  YT    LS+CA ++ L  G+Q H +VLK          S
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAES 420

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +GN++I +Y KCG ++   RVF  M E+D +SWNA+I  YAQ+G G EA+  F+ M 
Sbjct: 421 DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKML 480

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G  KPD  T   VL ACSHAGLV++G   F SM  ++G IP +DH +CM+DLLGRAG 
Sbjct: 481 VCGE-KPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGC 538

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L+EA+ +I +  +   +  W +L +AC  HGN+ +G+  A  LLE +      YVLLSN+
Sbjct: 539 LNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNM 598

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA  G W +   +R+L+++ GV KQPGCSWI
Sbjct: 599 YAELGRWGDVVRVRKLMRQQGVTKQPGCSWI 629



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 279/580 (48%), Gaps = 60/580 (10%)

Query: 49  SSHKLKPDIY-----SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK 103
           + H L  D+Y       +  L +C   R+A     +HA  L         + N ++ +Y 
Sbjct: 2   AKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYG 61

Query: 104 NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
               L   +++F  +   + ++W + +S  TK G +D A  +F  MP+ D   +N+M++G
Sbjct: 62  KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSG 121

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSC 221
             ++   +  +  F +MH+ D   + YSF S LS C AGL++   G Q+H+LV+KS +S 
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSAC-AGLMDLNMGTQVHALVSKSRYST 180

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDGLASVGRVEEALIRFR 280
            V + +ALI MY  CG+V  A +VF    G +  + +++N ++      G   EAL  F 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVF---SGMIERNLVTWNSLITCYEQNGPASEALEVFV 237

Query: 281 DMLVASLRPSELTFVSVMSAC--LCP-RVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSC 336
            M+ + L P E+T  SV+SAC  LC  + G Q+HA+ +K+  F     + NA + MY+ C
Sbjct: 238 RMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKC 297

Query: 337 GKIDEACMIFARLQ-------------------------------EKDIVSWNTMISTYA 365
            K++EA  +F R+                                ++++VSWN +I+ Y 
Sbjct: 298 SKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYT 357

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--------EMIHAFVFING 416
           Q      A+  +  ++   I P  +TFG+LL A +   +++         +   F F +G
Sbjct: 358 QNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSG 417

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++I V N+LI  Y K   I+   ++F  M  R+ ++WN +I G+  NG+  + LQ F 
Sbjct: 418 AESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 477

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++L+   +PD  T+   L +C+    +  G+     + ++ LI        M+ L  + G
Sbjct: 478 KMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAG 537

Query: 537 DLDCSLRVFNMM-IEKDTISWNALISAYAQHGE---GKEA 572
            L+ +  +   M +  D + W +L++A   HG    GK A
Sbjct: 538 CLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 577


>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
 gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 696

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 202/621 (32%), Positives = 334/621 (53%), Gaps = 19/621 (3%)

Query: 126 WTTFLSACTKMGHVDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           W   L+A ++      A    VFD++P RD   +NA++     +G       L R MH  
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87

Query: 184 DVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            +  + ++  S L S   A     G QL SL  KSG +  V   +AL+ +Y  CG V DA
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+       + +S+N ++ G    G +  AL  F +M    L P E TF S+++A  
Sbjct: 148 RQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNT 359
            P   + +Q+H + +K G     +V NAAIT YS CG + ++  IF  + + +D++SWN 
Sbjct: 206 GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265

Query: 360 MISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS---SGFIE-MVEMIHAFVFI 414
           M+  Y    +   A+  ++ M Q  G+ PD ++F S+++S    G  +    +IH  V  
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325

Query: 415 NGIITNIQVSNALISAYAK-NER--IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           + +     V NALI+ Y + NE   ++ AY+ F+++  ++ ++WN+++ G+  +G     
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L+ F  +    +R DEY  S AL S + ++ L+ GKQIHG V+ +   S   + +++I +
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQA 590
           Y+K G +D + + F    +  ++ WNA+I  YAQHG+ +     F  M  + R  P D  
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEM--LQRKAPLDHI 503

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  ++++CSHAGLVD+G+ I ++M   YG     +H +C +DL GRAG LD+A+++I+S
Sbjct: 504 TFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDS 563

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +  +  W  L  AC  HGN+ L   +A  L   E  + S YVLLS++Y+  G+W + 
Sbjct: 564 MPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDR 623

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A ++ ++K+ G+ K PG SWI
Sbjct: 624 ATVQRVMKKRGLSKVPGWSWI 644



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 263/559 (47%), Gaps = 52/559 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  + SG + +A  L   +H+   L  + ++L + L + A  R  A G QL + AL
Sbjct: 62  NALLAAQAASGAHPEAWRLLRAMHA-QGLASNTFALGSALRSAAVARRPAIGAQLQSLAL 120

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL      A+ +L +Y                                K G V  A +
Sbjct: 121 KSGLANNVFAASALLDVY-------------------------------AKCGRVRDARQ 149

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD MP+R+   +NA+I G TE+G     + LF EM +  +  D  +FAS+L+  +    
Sbjct: 150 VFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSC 209

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
               QLH  + K G +  ++V+NA IT Y  CG++ D+ ++F +  G + D IS+N M+ 
Sbjct: 210 FLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF-DGIGDIRDLISWNAMLG 268

Query: 265 GLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGF 319
                G  +EA+  F R M  + + P   +F S++S+C         G  +H   +KS  
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL 328

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMI------FARLQEKDIVSWNTMISTYAQRNLGRSA 373
           E  T V NA I MY+   + +E CM+      F  L  KD VSWN+M++ Y+Q  L   A
Sbjct: 329 EGVTPVCNALIAMYT---RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M S  +R DE+ F + L SS     +++ + IH  V  +G  +N  VS++LI  
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K+  I  A + F      + + WN +I G+  +G        F+E+L  +   D  T 
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505

Query: 491 SVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
              ++SC+    +  G +I +    K  +  +M      + LY + G LD + ++ + M 
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565

Query: 549 IEKDTISWNALISAYAQHG 567
            E D + W  L+ A   HG
Sbjct: 566 FEPDAMVWMTLLGACRIHG 584



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 37/348 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA-NLRNAAFGNQL 79
           L+  N  L   + +G   +A+  FV++     + PD+YS ++ +++C+ +  +   G  +
Sbjct: 260 LISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI 319

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   +++ L+    V N ++++Y                        T +   C  M   
Sbjct: 320 HGLVIKSALEGVTPVCNALIAMY------------------------TRYNENC--MMED 353

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SV 198
            Y C  F+ +  +D   +N+M+TG +++G     +  FR M   +VR D Y+F++ L S 
Sbjct: 354 AYKC--FNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSS 411

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            +  +L+ G+Q+H LV  SGF+    V ++LI MY   G + DA K FEEA       + 
Sbjct: 412 SELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK--SSSVP 469

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQA 314
           +N M+ G A  G+ E   I F +ML        +TFV ++++C    L       ++   
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
            K G           + +Y   G++D+A  +   +  E D + W T++
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 233/757 (30%), Positives = 378/757 (49%), Gaps = 85/757 (11%)

Query: 25  NISLANLSRSGHYQ-DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           NI L+  S S     D + +F  +HSS +  P+  +++T L  CA L +   G  +H Y 
Sbjct: 113 NIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYV 172

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +++G        N ++S+Y                            + C  + H  YA 
Sbjct: 173 IKSGFDQDTLGGNALVSMY----------------------------AKCGLVSHDAYA- 203

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---D 200
            VFD +  +D+  +NAMI G  EN   +    LF  M K   R +  + A++L VC   D
Sbjct: 204 -VFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFD 262

Query: 201 AGLLEF-GRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             +  + GRQ+HS V +    S  VSV NALI++Y   G + +A  +F        D ++
Sbjct: 263 KSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDAR--DLVT 320

Query: 259 YNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           +N  + G  S G   +AL  F ++  + +L P  +T VS++ AC      +VG Q+HA  
Sbjct: 321 WNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYI 380

Query: 315 MKSGFEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +  F  Y T+V NA ++ Y+ CG  +EA   F+ +  KD++SWN++   + ++    S 
Sbjct: 381 FRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKR-HHSR 439

Query: 374 ILAYLE-MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII---TNIQVSNA 426
            L+ L  M  + IRPD  T  +++   AS   +E V+ IH++    G +   T   V NA
Sbjct: 440 FLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNA 499

Query: 427 LISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFL---------------------- 463
           ++ AY+K   ++ A ++F N+S  RN++T N+LI+G++                      
Sbjct: 500 ILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTT 559

Query: 464 ---------LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
                     N  P Q L    EL    ++PD  T+   L  C +++S+    Q  GY++
Sbjct: 560 WNLMVRVYAENDCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYII 619

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           + +    + L  A++  YAKCG +  + ++F +  EKD + + A+I  YA HG  +EA+ 
Sbjct: 620 R-SCFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALW 678

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  M  +G I+PD   FT++LSACSHAG VD+G +IF S+   +G  P  +  +C++DL
Sbjct: 679 IFSHMLKLG-IQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDL 737

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           L R G + EA  ++ S  I+A ++ W  L  AC  H  + LGRI+A  L + E +    Y
Sbjct: 738 LARGGRISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNY 797

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++LSN+YAA   W+    +R +++   + K  GCSWI
Sbjct: 798 IVLSNLYAADARWDGVMEVRRMMRNKDLKKPAGCSWI 834



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 240/473 (50%), Gaps = 27/473 (5%)

Query: 149 MPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHKLD--VRRDNYSFASVLSVCDAGLLE 205
           M  RD   + ++I   C E  + +  + LF    K     + D+   A++L  C A L  
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSE-ALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAP 59

Query: 206 -FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR LH  V K G          L+ MY  CG +V+  K+F++     CD + +N+++ 
Sbjct: 60  NLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSH--CDPVVWNIVLS 117

Query: 265 GLASVGRVEEALIRFRDMLVASLR--PSELTFVSVMSACLCPRVG-----YQVHAQAMKS 317
           G +   + +  ++R   M+ +S    P+ +T  +V+   +C R+G       VH   +KS
Sbjct: 118 GFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLP--VCARLGDLDAGKCVHGYVIKS 175

Query: 318 GFEAYTSVSNAAITMYSSCGKID-EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           GF+  T   NA ++MY+ CG +  +A  +F  +  KD+VSWN MI+  A+  L   A L 
Sbjct: 176 GFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLL 235

Query: 377 YLEMQSVGIRPDEFTFGSLL-ASSGFIEMV-----EMIHAFVF-INGIITNIQVSNALIS 429
           +  M     RP+  T  ++L   + F + V       IH++V     +  ++ V NALIS
Sbjct: 236 FSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALIS 295

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEY 488
            Y K  ++++A  +F  M  R+++TWN  I G+  NG  ++ L  F  L  +  L PD  
Sbjct: 296 LYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSV 355

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T+   L +CA++ +L+ GKQIH Y+ ++  L    ++GNA+++ YAKCG  + +   F+M
Sbjct: 356 TMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSM 415

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  KD ISWN++  A+ +       +S    M  + RI+PD  T  A++  C+
Sbjct: 416 ISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKL-RIRPDSVTILAIIRLCA 467



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 165/624 (26%), Positives = 286/624 (45%), Gaps = 86/624 (13%)

Query: 30  NLSRSGHYQDALHLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           +L     + +AL LF      H+  KPD   L+  L +C+ L     G  LH Y ++ G 
Sbjct: 15  SLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQG- 73

Query: 89  KAYPHVANT-ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
               HV N  +L++Y     LV   ++F ++ + D   W   LS  +     D       
Sbjct: 74  HGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNKCD------- 126

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVC-DAGLLE 205
                                  D+ + +FR MH   +   ++ + A+VL VC   G L+
Sbjct: 127 ----------------------ADV-MRVFRMMHSSREALPNSVTVATVLPVCARLGDLD 163

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV-DACKVFEEAKGYVCDHISYNVMMD 264
            G+ +H  V KSGF       NAL++MY  CG V  DA  VF+       D +S+N M+ 
Sbjct: 164 AGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIA--YKDVVSWNAMIA 221

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC------LCPRVGYQVHAQAMK-S 317
           GLA    VE+A + F  M+    RP+  T  +++  C      +    G Q+H+  ++  
Sbjct: 222 GLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWP 281

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
              A  SV NA I++Y   G++ EA  +F  +  +D+V+WN  I+ Y        A+  +
Sbjct: 282 ELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLF 341

Query: 378 LEMQSV-GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFING-IITNIQVSNALISAYA 432
             + S+  + PD  T  S+L +   ++ +++   IHA++F +  +  +  V NAL+S YA
Sbjct: 342 GNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYA 401

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K    ++AY  F  +S +++I+WN++ + F       + L     +L   +RPD  T+  
Sbjct: 402 KCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILA 461

Query: 493 ALSSCARISSLRHGKQIHGYVLKN-NLISKM--SLGNAMITLYAKCGDLDCSLRVF---- 545
            +  CA +  +   K+IH Y ++  +L+S    ++GNA++  Y+KCG+++ + ++F    
Sbjct: 462 IIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLS 521

Query: 546 ------------------------NM----MIEKDTISWNALISAYAQHGEGKEAVSCFK 577
                                   NM    M E D  +WN ++  YA++   ++A+    
Sbjct: 522 EKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCH 581

Query: 578 AMQDVGRIKPDQATFTAVLSACSH 601
            +Q  G +KPD  T  ++L  C+ 
Sbjct: 582 ELQARG-MKPDTVTIMSLLPVCTQ 604



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 187/387 (48%), Gaps = 17/387 (4%)

Query: 274 EALIRFRDMLVA--SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
           EAL  F   L    + +P      +++ +C   L P +G  +H   +K G  +    +  
Sbjct: 24  EALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKG 83

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIR 386
            + MY+ CG + E   +F +L   D V WN ++S ++  N   + ++    M   S    
Sbjct: 84  LLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREAL 143

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ-AYQ 442
           P+  T  ++L   A  G ++  + +H +V  +G   +    NAL+S YAK   +   AY 
Sbjct: 144 PNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYA 203

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS- 501
           +F N++ +++++WN +I G   N         FS ++    RP+  T++  L  CA    
Sbjct: 204 VFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDK 263

Query: 502 --SLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
             +   G+QIH YVL+   L + +S+ NA+I+LY K G +  +  +F  M  +D ++WNA
Sbjct: 264 SVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNA 323

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
            I+ Y  +GE  +A+  F  +  +  + PD  T  ++L AC+    +  G +I  + +  
Sbjct: 324 FIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQI-HAYIFR 382

Query: 619 YGFIPAEDHL-SCMLDLLGRAGYLDEA 644
           + F+  +  + + ++    + GY +EA
Sbjct: 383 HPFLFYDTAVGNALVSFYAKCGYTEEA 409



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 204/482 (42%), Gaps = 75/482 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  + +G +  ALHLF  + S   L PD  ++ + L ACA L+N   G Q+H
Sbjct: 318 LVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIH 377

Query: 81  AYALRAGLKAY-PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           AY  R     Y   V N ++S Y            FS I   D+ SW +           
Sbjct: 378 AYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNS----------- 426

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                +FD                  E  +    + L   M KL +R D+ +  +++ +C
Sbjct: 427 -----IFDAF---------------GEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLC 466

Query: 200 DAGL-LEFGRQLHSLVTKSG---FSCLVSVVNALITMYFNCGNVVDACKVFEE------- 248
            + L +E  +++HS   ++G    +   +V NA++  Y  CGN+  A K+F+        
Sbjct: 467 ASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNL 526

Query: 249 ------AKGYV-----------------CDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                   GYV                  D  ++N+M+   A     E+AL    ++   
Sbjct: 527 VTCNSLISGYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQAR 586

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            ++P  +T +S++  C       +  Q     ++S F+    +  A +  Y+ CG I  A
Sbjct: 587 GMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCFKD-LHLEAALLDAYAKCGIIGRA 645

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---S 399
             IF    EKD+V +  MI  YA   +   A+  +  M  +GI+PD   F S+L++   +
Sbjct: 646 YKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHA 705

Query: 400 GFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNT 457
           G + E +++ ++   ++G+   ++    ++   A+  RI +AY +  ++    N   W T
Sbjct: 706 GRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWGT 765

Query: 458 LI 459
           L+
Sbjct: 766 LL 767


>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
          Length = 800

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 204/619 (32%), Positives = 332/619 (53%), Gaps = 35/619 (5%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y+    +S   K G +  A ++FD+   RD   +N MI G    G  +  +   + M +
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKR 93

Query: 183 LDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                D YSF S+L  V   G +E G+Q+HS++ K G+   V   +AL+ MY  C  V D
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVED 153

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF+     + + +++N ++ G A VG    A      M +  +   + TF  +++  
Sbjct: 154 AFEVFKSIN--IRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLL 211

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIVSW 357
             P   ++  QVHA+ +K G  + T+V NA IT YS CG I++A  +F   ++ +D+V+W
Sbjct: 212 DDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTW 271

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFI 414
           N+M++ Y   N    A   +LEMQ +G  PD +T+ S+++++         + +H  V  
Sbjct: 272 NSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIK 331

Query: 415 NGIITNIQVSNALISAYAKN--ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            G+   + +SN+LI+ Y K+  + + +A  IF ++  ++ ++WN+++ GF  +G     L
Sbjct: 332 RGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDAL 391

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F  +    +  D Y  S  L SC+ +++L+ G+Q+H  VL                  
Sbjct: 392 KFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVH--VL------------------ 431

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
             CG ++ + + F+   +  +I+WN+LI  YAQHG GK A+  F  M+D  R+K D  TF
Sbjct: 432 --CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKD-RRVKLDHITF 488

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            AVL+ACSH GLV++G     SM +DYG  P  +H +CM+DLLGRAG LDEA+ +I +  
Sbjct: 489 VAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMP 548

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
            +  +  W  L  AC   G++ L   +A  LLE E ++   YVLLS+++     W E A+
Sbjct: 549 FEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKAS 608

Query: 713 IRELLKRTGVIKQPGCSWI 731
           I+ L+K  GV K PG SWI
Sbjct: 609 IKRLMKERGVKKVPGWSWI 627



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 215/430 (50%), Gaps = 25/430 (5%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  KSG +  +   N +I+ Y  CG +  A K+F+E      D +S+N M+ G  + G
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQR--DAVSWNTMIAGXVNFG 79

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSN 327
             E AL   + M          +F S++    C     VG QVH+  +K G+E      +
Sbjct: 80  NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGS 139

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+ C ++++A  +F  +  ++ V+WN +IS YA      +A      M+  G+  
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEI 199

Query: 388 DEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ TF  LL         ++   +HA +  +G+ ++  V NA+I+AY++   I+ A ++F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259

Query: 445 HN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
              +  R+++TWN+++  +L+N    +  + F E+ +    PD YT +  +S+    +  
Sbjct: 260 DGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQ 319

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAK--CGDLDCSLRVFNMMIEKDTISWNALIS 561
             GK +HG V+K  L   + + N++I +Y K     +D +L +F  +  KD +SWN++++
Sbjct: 320 GQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILT 379

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH-------------AGLVDDG 608
            ++Q G  ++A+  F+ M+    +  D   F+AVL +CS               G+++D 
Sbjct: 380 GFSQSGLSEDALKFFENMRS-QYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGVIEDA 438

Query: 609 TRIFDSMVND 618
            + FD+   D
Sbjct: 439 RKSFDATPKD 448



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 205/413 (49%), Gaps = 54/413 (13%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+KSG  A    +N  I+ Y+ CG+I  A  +F    ++D VSWNTMI+        
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWNTMIAGXVNFGNF 81

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +A+     M+  G   D ++FGS+L   A  G++E+ + +H+ +   G   N+   +AL
Sbjct: 82  ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMIVKIGYEGNVFAGSAL 141

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK ER++ A+++F +++ RN +TWN LI+G+   G           + +  +  D+
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDD 201

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T +  L+        +   Q+H  ++K+ L S  ++ NA+IT Y++CG ++ + RVF+ 
Sbjct: 202 GTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDG 261

Query: 548 MIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC------- 599
            IE +D ++WN++++AY  + + +EA   F  MQ +G  +PD  T+T+V+SA        
Sbjct: 262 AIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLG-FEPDIYTYTSVISAAFEXAHQG 320

Query: 600 ------------------------------SHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
                                         SH+  +D+   IF+S+ N       +DH+S
Sbjct: 321 QGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLEN-------KDHVS 373

Query: 630 --CMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGR 677
              +L    ++G  ++A +    + SQ++      + A+  +C+    L+LG+
Sbjct: 374 WNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQ 426



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 136/556 (24%), Positives = 232/556 (41%), Gaps = 60/556 (10%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
            TS+   +  N  +A     G+++ AL  F++    +    D YS  + L   A +    
Sbjct: 59  ETSQRDAVSWNTMIAGXVNFGNFETALE-FLKSMKRYGFAVDGYSFGSILKGVACVGYVE 117

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G Q+H+  ++ G +      + +L +Y                                
Sbjct: 118 VGQQVHSMIVKIGYEGNVFAGSALLDMY-------------------------------A 146

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K   V+ A EVF  +  R+   +NA+I+G    G       L   M    V  D+ +FA 
Sbjct: 147 KCERVEDAFEVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDCMELEGVEIDDGTFAP 206

Query: 195 VLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L++ D   L +   Q+H+ + K G +   +V NA+IT Y  CG++ DA +VF+ A    
Sbjct: 207 LLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAI-ET 265

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +++N M+       + EEA   F +M V    P   T+ SV+SA         G  +
Sbjct: 266 RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVISAAFEXAHQGQGKSL 325

Query: 311 HAQAMKSGFEAYTSVSNAAITMY--SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           H   +K G E    +SN+ I MY  S    +DEA  IF  L+ KD VSWN++++ ++Q  
Sbjct: 326 HGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSG 385

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           L   A+  +  M+S  +  D + F ++L S   +  +++      + G+           
Sbjct: 386 LSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLCGV----------- 434

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
                   I+ A + F      + I WN+LI G+  +G     L  F  +    ++ D  
Sbjct: 435 --------IEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHI 486

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T    L++C+ I  +  G      +  +  +  +M     MI L  + G LD +  +   
Sbjct: 487 TFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEA 546

Query: 548 M-IEKDTISWNALISA 562
           M  E D + W  L+ A
Sbjct: 547 MPFEPDAMVWKTLLGA 562



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 180/433 (41%), Gaps = 71/433 (16%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+HA  ++ GL +   V N I++ Y     +   +RVF                     
Sbjct: 221 TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF--------------------- 259

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              D A E       RDL  +N+M+     N  E+    LF EM  L    D Y++ SV+
Sbjct: 260 ---DGAIET------RDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFEPDIYTYTSVI 310

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF--NCGNVVDACKVFEEAKGYV 253
           S   +      G+ LH LV K G   LV + N+LI MY   +  ++ +A  +FE  +   
Sbjct: 311 SAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENK- 369

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
            DH+S+N ++ G +  G  E+AL  F +M    +      F +V+ +C      ++G QV
Sbjct: 370 -DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQV 428

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H                        CG I++A   F    +   ++WN++I  YAQ   G
Sbjct: 429 HVL----------------------CGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRG 466

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVS 424
           + A+  +  M+   ++ D  TF ++L +   I +VE    + F+       GI   ++  
Sbjct: 467 KIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVE--EGWSFLKSMESDYGIPPRMEHY 524

Query: 425 NALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +I    +  R+ +A  +   M    + + W TL+      G      Q  S LL  EL
Sbjct: 525 ACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLL--EL 582

Query: 484 RPDEYTLSVALSS 496
            P+E+   V LSS
Sbjct: 583 EPEEHCTYVLLSS 595



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 154/356 (43%), Gaps = 69/356 (19%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY--KNARDLVS 110
            +PDIY+ ++ ++A     +   G  LH   ++ GL+    ++N+++++Y   +++ +  
Sbjct: 299 FEPDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDE 358

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
              +F  ++N D  SW                               N+++TG +++G  
Sbjct: 359 ALNIFESLENKDHVSW-------------------------------NSILTGFSQSGLS 387

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  +  F  M    V  D+Y+F++VL  C D   L+ G+Q+H L                
Sbjct: 388 EDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVL---------------- 431

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
                 CG + DA K F+         I++N ++ G A  GR + AL  F  M    ++ 
Sbjct: 432 ------CGVIEDARKSFDATPKD--SSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 483

Query: 290 SELTFVSVMSACLCPRVGYQVHA----QAMKSGFEAYTSVSNAA--ITMYSSCGKIDEA- 342
             +TFV+V++A  C  +G         ++M+S +     + + A  I +    G++DEA 
Sbjct: 484 DHITFVAVLTA--CSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAK 541

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
            +I A   E D + W T++   A R  G   + + +    + + P+E     LL+S
Sbjct: 542 ALIEAMPFEPDAMVWKTLLG--ACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 595


>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
          Length = 696

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 331/621 (53%), Gaps = 19/621 (3%)

Query: 126 WTTFLSACTKMGHVDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           W   L+A ++      A    VFD++P RD   +NA++     +G       L R MH  
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQ 87

Query: 184 DVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            +  + ++  S L S   A     G QL SL  KSG +  V   +AL+ +Y  CG V DA
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+       + +S+N ++ G    G +  AL  F +M    L P E TF S+++A  
Sbjct: 148 RQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVE 205

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNT 359
            P   + +Q+H + +K G     +V NAAIT YS CG + ++  IF  + + +D++SWN 
Sbjct: 206 GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265

Query: 360 MISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGF----IEMVEMIHAFVFI 414
           M+  Y    +   A+  ++ M Q  G+ PD ++F S+++S            +IH  V  
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325

Query: 415 NGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           + +     V NALI+ Y +   N  ++ AY+ F+++  ++ ++WN+++ G+  +G     
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L+ F  +    +R DEY  S AL S + ++ L+ GKQIHG V+ +   S   + +++I +
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQA 590
           Y+K G +D + + F    +  ++ WNA+I  YAQHG+ +     F  M  + R  P D  
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEM--LQRKAPLDHI 503

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  ++++CSHAGLVD+G+ I ++M   YG     +H +C +DL GRAG LD+A+++I+S
Sbjct: 504 TFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDS 563

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +  +  W  L  AC  HGN+ L   +A  L   E  + S YVLLS++Y+  G+W + 
Sbjct: 564 MPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDR 623

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A ++ ++K+ G+ K PG SWI
Sbjct: 624 ATVQRVMKKRGLSKVPGWSWI 644



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 263/559 (47%), Gaps = 52/559 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  + SG + +A  L   +H+   L  + ++L + L + A  R  A G QL + AL
Sbjct: 62  NALLAAQAASGAHPEAWRLLRAMHA-QGLASNTFALGSALRSAAVARRPAIGAQLQSLAL 120

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL      A+ +L +Y                                K G V  A +
Sbjct: 121 KSGLANNVFAASALLDVY-------------------------------AKCGRVRDARQ 149

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD MP+R+   +NA+I G TE+G     + LF EM +  +  D  +FAS+L+  +    
Sbjct: 150 VFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSC 209

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
               QLH  + K G +  ++V+NA IT Y  CG++ D+ ++F +  G + D IS+N M+ 
Sbjct: 210 FLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF-DGIGDIRDLISWNAMLG 268

Query: 265 GLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGF 319
                G  +EA+  F R M  + + P   +F S++S+C         G  +H   +KS  
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL 328

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMI------FARLQEKDIVSWNTMISTYAQRNLGRSA 373
           E  T V NA I MY+   + +E CM+      F  L  KD VSWN+M++ Y+Q  L   A
Sbjct: 329 EGVTPVCNALIAMYT---RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M S  +R DE+ F + L SS     +++ + IH  V  +G  +N  VS++LI  
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K+  I  A + F      + + WN +I G+  +G        F+E+L  +   D  T 
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505

Query: 491 SVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
              ++SC+    +  G +I +    K  +  +M      + LY + G LD + ++ + M 
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565

Query: 549 IEKDTISWNALISAYAQHG 567
            E D + W  L+ A   HG
Sbjct: 566 FEPDAMVWMTLLGACRIHG 584



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 37/348 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA-NLRNAAFGNQL 79
           L+  N  L   + +G   +A+  FV++     + PD+YS ++ +++C+ +  +   G  +
Sbjct: 260 LISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI 319

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   +++ L+    V N ++++Y                        T +   C  M   
Sbjct: 320 HGLVIKSALEGVTPVCNALIAMY------------------------TRYNENC--MMED 353

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SV 198
            Y C  F+ +  +D   +N+M+TG +++G     +  FR M   +VR D Y+F++ L S 
Sbjct: 354 AYKC--FNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSS 411

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            +  +L+ G+Q+H LV  SGF+    V ++LI MY   G + DA K FEEA       + 
Sbjct: 412 SELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK--SSSVP 469

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQA 314
           +N M+ G A  G+ E   I F +ML        +TFV ++++C    L       ++   
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
            K G           + +Y   G++D+A  +   +  E D + W T++
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577


>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 205/697 (29%), Positives = 347/697 (49%), Gaps = 48/697 (6%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           SS   + D  +LST L   AN +    G+Q+HA  ++ G                     
Sbjct: 68  SSLSFRNDPTALSTALTHSANSKCILLGSQIHAQIIKLGF-------------------- 107

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
                        D++S    +   TK G +    +VF +MP ++L  +  +++G  +NG
Sbjct: 108 -----------CNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNG 156

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-------GLLEFGRQLHSLVTKSGFSC 221
             ++G+G++ EM +  +  + ++   V   C A       G L FGRQ+H L+ +S    
Sbjct: 157 EFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGF 216

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
             +V+N+L+ MYF  G  + A KVF+  +    D IS+N +  GL+      E    F  
Sbjct: 217 STAVMNSLMDMYFKNGGGLYALKVFDRLQDK--DIISWNTVFAGLSQGDDAREIGRFFHK 274

Query: 282 MLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           +++  L+P+ +TF  +   C   L    G Q H  A + G     SV+++ I M+S CG 
Sbjct: 275 LMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGA 334

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           +  AC++F     K I + N MIS Y        A+  +  +  +G+  DE TF S L +
Sbjct: 335 MRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEA 394

Query: 399 SGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
               E   +   +H  +  +G  +   V ++L+  Y     +  +++ F+ +   ++++W
Sbjct: 395 CFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSW 454

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             +I+  +  G+  + +   + L  +  +PDE+      + CA I++ R  K +H  V+K
Sbjct: 455 GAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVK 514

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVS 574
               + + + +A+I  YAKCGD++ + RVF+     +D I +N ++ AYA HG  +EAV 
Sbjct: 515 MGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVE 574

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F+ M+ +  ++P QATF +V+SACSH GLV+ G   F SM  DYG  P+ D+  C++DL
Sbjct: 575 TFEKMK-LATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNLDYGMDPSPDNYGCLVDL 633

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
             R G+L++A+ +I +         W +L + C  HGN  LG   A  LL+   +  + Y
Sbjct: 634 FSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGEWAAKKLLQLVPENDAAY 693

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           VLLS +Y+  G W +AA +R+ +   G+ K PGCSWI
Sbjct: 694 VLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 730



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 231/501 (46%), Gaps = 50/501 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR------NAA 74
           L+   + ++   ++G ++  L +++++  +  L P+ ++L     ACA L       N  
Sbjct: 142 LVSWTLVVSGAVQNGEFEMGLGVYLEMIRT-GLVPNEFALGCVTKACAALGGCLVVGNLN 200

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           FG Q+H   +++ +     V N+++ +Y KN   L ++K VF  +Q+ D+ SW T  +  
Sbjct: 201 FGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALK-VFDRLQDKDIISWNTVFAGL 259

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           ++          F K+          M+TG                     ++ +  +F+
Sbjct: 260 SQGDDAREIGRFFHKL----------MLTG---------------------LKPNCVTFS 288

Query: 194 SVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            +   C   L L  G Q H L  + G S   SV ++LI M+  CG +  AC VF+ A  +
Sbjct: 289 ILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFDSAP-F 347

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQ 309
              H + N M+ G        EAL  F ++    L   E TF S + AC      ++G Q
Sbjct: 348 KSIH-TCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKLGRQ 406

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +KSGF +   V ++ +  Y   G +D++   F  ++  D+VSW  MIS    +  
Sbjct: 407 MHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVHKGY 466

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNA 426
              AI     ++  G +PDEF FGS+      I      + +H+ V   G   ++ V++A
Sbjct: 467 SSEAIGLLNRLKEAGGKPDEFIFGSIFNCCAGIAAYRQTKSVHSLVVKMGYEAHVFVASA 526

Query: 427 LISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +I AYAK   I+ A ++F   S  R++I +NT++  +  +G   + ++ F ++ ++ L P
Sbjct: 527 VIDAYAKCGDIENARRVFDQTSRFRDVILFNTMVMAYAHHGLVREAVETFEKMKLATLEP 586

Query: 486 DEYTLSVALSSCARISSLRHG 506
            + T    +S+C+ +  +  G
Sbjct: 587 SQATFVSVISACSHLGLVEQG 607


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 203/622 (32%), Positives = 331/622 (53%), Gaps = 17/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DVY+    L+   K   +  A  +FD+MP RD   +N MI G    G  +    + R M 
Sbjct: 32  DVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMR 91

Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 D Y+F S+L  +  AG+   G+Q+HS++ K G++  V   +AL+ MY  C  + 
Sbjct: 92  SCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLE 151

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-- 298
           DA   F     +  + +S+N M++G A  G  E A      M     +  + T+  ++  
Sbjct: 152 DAYLSFLSISKH--NTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPL 209

Query: 299 --SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIV 355
              A  C  +  Q+H + +K G E   ++ NA IT YS CG +D+A  IF +    +D+V
Sbjct: 210 LDDADFC-NLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLV 268

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAF 411
           +WN++++ Y  R+    A    ++MQ  G  PD +++ S++ S+ F E +      +H  
Sbjct: 269 TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSII-SACFNENISNNGRSLHGL 327

Query: 412 VFINGIITNIQVSNALISAYAKNE--RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           V   G   ++ +SNALIS Y K++   +K+A  IF ++  ++ ++WN+++ G    G   
Sbjct: 328 VIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGSSE 387

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             ++ F  +  + +  D Y+ S  L SC+ +++ + G+QIH   LK  L S   + +++I
Sbjct: 388 DAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSSSLI 447

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y+KCG ++ + R F    +  +I+WNAL+  YAQHG+   A+  F  M+   ++K D 
Sbjct: 448 FMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLME-XKKVKMDH 506

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF AVL+ACSH GLV+ G +    M +DYG  P  +H +C +DL GR+G L+EA+ +I 
Sbjct: 507 ITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIE 566

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
               +  +  W     AC + GN+ L   +AG LLE E ++   YVLLSN+Y     W+E
Sbjct: 567 EMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLMRWDE 626

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
            A ++ L+K  GV K PG SWI
Sbjct: 627 KAKVKRLMKERGVKKVPGWSWI 648



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 224/471 (47%), Gaps = 14/471 (2%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           HSL  K G    V   N ++  Y+ C  +  A  +F+E    + D +S+N M+ G  + G
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP--MRDSVSWNTMIAGHINCG 78

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            +E +    R M          TF S++          +G QVH+  +K G+       +
Sbjct: 79  NLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGS 138

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+ C K+++A + F  + + + VSWN MI+ YAQ     +A      M+  G + 
Sbjct: 139 ALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKV 198

Query: 388 DEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ T+  LL     + F  +   +H  +  +G+     + NALI++Y+K   +  A +IF
Sbjct: 199 DDGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF 258

Query: 445 HNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
            + +  R+++TWN+L+  +LL        +   ++      PD Y+ +  +S+C   +  
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENIS 318

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKC--GDLDCSLRVFNMMIEKDTISWNALIS 561
            +G+ +HG V+K      + + NA+I++Y K   G +  +L +F  +  KD +SWN++++
Sbjct: 319 NNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILT 378

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
             +Q G  ++AV  F  M+    +  D  +F+AVL +CS       G +I   +   YG 
Sbjct: 379 GLSQTGSSEDAVKSFLHMRSAA-MDIDHYSFSAVLRSCSDLATFQLGQQI-HVLALKYGL 436

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
              E   S ++ +  + G +++A R    +  +  S  W AL    A HG 
Sbjct: 437 ESNEFVSSSLIFMYSKCGIIEDARRSFE-EASKNSSITWNALMFGYAQHGQ 486



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 199/441 (45%), Gaps = 48/441 (10%)

Query: 70  LRNAAFGN---QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           L +A F N   QLH   ++ GL+    + N +++ Y     L   KR+F           
Sbjct: 210 LDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIF----------- 258

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
                        D +  +      RDL  +N+++        ED+   L  +M +    
Sbjct: 259 -------------DSSAGI------RDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFE 299

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF--NCGNVVDAC 243
            D YS+ S++S C +  +   GR LH LV K GF   V + NALI+MY   + G++ +A 
Sbjct: 300 PDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEAL 359

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-- 301
            +FE  +    D +S+N ++ GL+  G  E+A+  F  M  A++     +F +V+ +C  
Sbjct: 360 CIFESLE--FKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSD 417

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               ++G Q+H  A+K G E+   VS++ I MYS CG I++A   F    +   ++WN +
Sbjct: 418 LATFQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNAL 477

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI----NG 416
           +  YAQ      A+  +  M+   ++ D  TF ++L +   I +VE    F+       G
Sbjct: 478 MFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYG 537

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHF 475
           +   ++     +  Y ++ R+++A  +   M  + +   W T +      G      Q  
Sbjct: 538 VPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVA 597

Query: 476 SELLMSELRPDEYTLSVALSS 496
             LL  E+ P+E+   V LS+
Sbjct: 598 GHLL--EMEPEEHCTYVLLSN 616



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 50/361 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A  L + +   H  +PD+YS ++ ++AC N   +  G  LH   ++ G +    ++N ++
Sbjct: 286 AFKLLIDMQE-HGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALI 344

Query: 100 SLYKNARDLVSVKR---VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           S+Y  + D  S+K    +F  ++  D  SW                              
Sbjct: 345 SMYLKS-DYGSMKEALCIFESLEFKDRVSW------------------------------ 373

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            N+++TG ++ G  +  +  F  M    +  D+YSF++VL  C D    + G+Q+H L  
Sbjct: 374 -NSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL 432

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G      V ++LI MY  CG + DA + FEEA       I++N +M G A  G+   A
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKN--SSITWNALMFGYAQHGQCNVA 490

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA----QAMKSGFEAYTSVSN--AA 329
           L  F  M    ++   +TFV+V++A  C  +G         + M+S +     + +   A
Sbjct: 491 LDLFFLMEXKKVKMDHITFVAVLTA--CSHIGLVEQGCKFLRCMESDYGVPPRMEHYACA 548

Query: 330 ITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           + +Y   G+++EA  +   +  K D   W T +   A R+ G   +   +    + + P+
Sbjct: 549 VDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLG--ACRSCGNIELACQVAGHLLEMEPE 606

Query: 389 E 389
           E
Sbjct: 607 E 607



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 12/228 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L  LS++G  +DA+  F+ + S+  +  D YS S  L +C++L     G Q+H  AL
Sbjct: 374 NSILTGLSQTGSSEDAVKSFLHMRSA-AMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL 432

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL++   V+++++ +Y     +   +R F E       +W   +    + G  + A +
Sbjct: 433 KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALD 492

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLS 197
           +F  M  +    D   + A++T C+  G  + G    R M   + +  R ++Y+ A  L 
Sbjct: 493 LFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDL- 551

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
              +G LE   +  +L+ +  F    +V    +    +CGN+  AC+V
Sbjct: 552 YGRSGRLE---EAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQV 596


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 217/699 (31%), Positives = 348/699 (49%), Gaps = 60/699 (8%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           +L P   +L   L   +  RN   G  +H   +R G       AN +++ Y     L   
Sbjct: 9   ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             +F+ I   DV SW                               N++ITG ++NG   
Sbjct: 69  HSIFNAIICKDVVSW-------------------------------NSLITGYSQNG--- 94

Query: 172 IGIG-------LFREMHKLDVRRDNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCL 222
            GI        LFREM   D+  + Y+ A +    ++ L     GRQ H+LV K      
Sbjct: 95  -GISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-ESSLQSSTVGRQAHALVVKMSSFGD 152

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY--NVMMDGLASVGRVEEALIRFR 280
           + V  +L+ MY   G V D  KVF     Y+ +  +Y  + M+ G A+ GRVEEA+  F 
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVF----AYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208

Query: 281 DMLVASLRPSELTFV-----SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
             L      S+  +V     S ++A +   +G Q+H   +K+G   + ++SNA +TMYS 
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GS 394
           C  ++EAC +F    +++ ++W+ M++ Y+Q      A+  +  M S GI+P E+T  G 
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328

Query: 395 LLASSG--FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L A S   ++E  + +H+F+   G   ++  + AL+  YAK   +  A + F  +  R++
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
             W +LI+G++ N    + L  +  +  + + P++ T++  L +C+ +++L  GKQ+HG+
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            +K+    ++ +G+A+ T+Y+KCG L+    VF     KD +SWNA+IS  + +G+G EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F+ M   G ++PD  TF  ++SACSH G V+ G   F+ M +  G  P  DH +CM+
Sbjct: 509 LELFEEMLAEG-MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLL RAG L EA+  I S +I      W  L SAC  HG   LG      L+     + S
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YV LS IY A G   +   + + ++  GV K+ GCSWI
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 280/584 (47%), Gaps = 43/584 (7%)

Query: 41  LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
           + LF ++ +   L P+ Y+L+    A ++L+++  G Q HA  ++       +V  +++ 
Sbjct: 103 MQLFREMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVG 161

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           +Y  A  +    +VF+ +   + Y+W+T +S     G V+ A +VF+             
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL------------ 209

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGF 219
                            RE  K +    +Y F +VLS   A + +  GRQ+H +  K+G 
Sbjct: 210 ---------------FLRE--KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              V++ NAL+TMY  C ++ +ACK+F+ +     + I+++ M+ G +  G   EA+  F
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDR--NSITWSAMVTGYSQNGESLEAVKLF 310

Query: 280 RDMLVASLRPSELTFVSVMSAC--LC-PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
             M  A ++PSE T V V++AC  +C    G Q+H+  +K GFE +   + A + MY+  
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G + +A   F  LQE+D+  W ++IS Y Q +    A++ Y  M++ GI P++ T  S+L
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              +S   +E+ + +H     +G    + + +AL + Y+K   ++    +F     ++++
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN +I+G   NG   + L+ F E+L   + PD+ T    +S+C+    +  G      +
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550

Query: 514 LKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
                L  K+     M+ L ++ G L +    + +  I+     W  L+SA   HG+ + 
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            V   + +  +G    + +T+  +    +  G + D  R++  M
Sbjct: 611 GVYAGEKLMALG--SRESSTYVQLSGIYTALGRMRDVERVWKHM 652



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 35/271 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S++G   +A+ LF ++ S+  +KP  Y++   L AC+++     G QLH++ L+ G + +
Sbjct: 298 SQNGESLEAVKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                 ++ +Y  A  L   ++ F  +Q  DV  WT+                       
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS----------------------- 393

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                   +I+G  +N   +  + L+R M    +  ++ + ASVL  C +   LE G+Q+
Sbjct: 394 --------LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    K GF   V + +AL TMY  CG++ D   VF        D +S+N M+ GL+  G
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK--DVVSWNAMISGLSHNG 503

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           + +EAL  F +ML   + P ++TFV+++SAC
Sbjct: 504 QGDEALELFEEMLAEGMEPDDVTFVNIISAC 534



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 16/239 (6%)

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
             +EL P   TL   L+  ++  +L  G+ +HG +++    + +   N ++  YAKCG L
Sbjct: 6   FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV--GRIKPDQATFTAVL 596
             +  +FN +I KD +SWN+LI+ Y+Q+G    + +  +  +++    I P+  T   + 
Sbjct: 66  AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125

Query: 597 SACS--HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
            A S   +  V          ++ +G I  +   + ++ +  +AG +++  +V  +   +
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVD---TSLVGMYCKAGLVEDGLKVF-AYMPE 181

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLL-EREQDKPSVYV-------LLSNIYAAAG 705
             +  W  + S  A  G +     +  L L E+E+   S YV       L + IY   G
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 12/163 (7%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++AL L+ ++ ++  + P+  ++++ L AC++L     G Q+H + ++ G      + + 
Sbjct: 405 EEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 463

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PD 151
           + ++Y     L     VF    N DV SW   +S  +  G  D A E+F++M      PD
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS 191
            D+   N +I+ C+  G+ + G   F  M     LD + D+Y+
Sbjct: 524 -DVTFVN-IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 212/733 (28%), Positives = 356/733 (48%), Gaps = 85/733 (11%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPD-IYSLSTTLAACANLRNAAFG 76
           K  +   N  L    ++   +DA  LF ++   + +  + + S  T   AC  L +   G
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECG 127

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            + H  +++ GL    +V N +L +Y   R +    + F ++  P+  S+T         
Sbjct: 128 RRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFT--------- 178

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                 AM+ G  ++   +    LFR M +  +  D+ S +SVL
Sbjct: 179 ----------------------AMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 216

Query: 197 SVCD-AGLLEFG--------------RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            VC   G  EFG              +Q+H L  K GF   + + N+L+ MY   GN+  
Sbjct: 217 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 276

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  +F          +S+NVM+ G     +  +A+   + M      P E+T+V+++ AC
Sbjct: 277 AEMIFVNMPEVSV--VSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVAC 334

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
           +                                  G I+    +F  +    + SWNT++
Sbjct: 335 I--------------------------------KSGDIEAGRQMFDGMSSPSLSSWNTIL 362

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGII 418
           S Y+Q    + A+  + EMQ   + PD  T   +L+S   + ++E    +HA        
Sbjct: 363 SGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFR 422

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           T+I +++ LI  Y+K  +++ A +IF  ++  +I+ WN+++ G  LN    +    F ++
Sbjct: 423 TDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM 482

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
               + P +++ +  LS CA++SSL  G+Q+H  + +   ++   +G+A+I +Y+KCGD+
Sbjct: 483 REKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDV 542

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D +  VF+MM+ K+T++WN +I  YAQ+G G EAV  ++ M   G  KPD  TF AVL+A
Sbjct: 543 DAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGE-KPDGITFVAVLTA 601

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSH+GLVD G +IF+SM  ++G  P  DH +C++D LGRAG L EAE +I+    +    
Sbjct: 602 CSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPI 661

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L S+C  + ++ L R  A  L   +    + YVLL+NIY++ G W++A  +REL+ 
Sbjct: 662 IWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMS 721

Query: 719 RTGVIKQPGCSWI 731
              V+K PG SWI
Sbjct: 722 YNQVVKDPGYSWI 734



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/608 (26%), Positives = 281/608 (46%), Gaps = 83/608 (13%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           L++ L  C + +    G  +HA+ LR+ L     ++N ++  Y     + + +R+F ++ 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
             D+Y+W   L A  K   ++ A  +F +MP+R++  +N +I+  T NG           
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNG----------- 116

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                              C A + +E GR+ H +  K G    + V NAL+ MY  C  
Sbjct: 117 ------------------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 158

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA + F +      + +S+  MM GLA   +V EA   FR ML   +    ++  SV+
Sbjct: 159 IGDAIQAFGDVPEP--NEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVL 216

Query: 299 SAC----------------LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             C                L   V G QVH   +K GFE+   ++N+ + MY+  G +D 
Sbjct: 217 GVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDS 276

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A MIF  + E  +VSWN MI+ Y Q++    AI     MQ  G  PDE T+ ++L     
Sbjct: 277 AEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV---- 332

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
                                       A  K+  I+   Q+F  MS  ++ +WNT+++G
Sbjct: 333 ----------------------------ACIKSGDIEAGRQMFDGMSSPSLSSWNTILSG 364

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  N    + ++ F E+    + PD  TL++ LSS A +  L  G+Q+H    K    + 
Sbjct: 365 YSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTD 424

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + L + +I +Y+KCG ++ + R+F+ + E D + WN++++  + +   KEA + FK M++
Sbjct: 425 IYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMRE 484

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
            G   P Q ++  VLS C+    +  G ++   +  + G++      S ++D+  + G +
Sbjct: 485 KGMF-PSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYSKCGDV 542

Query: 642 DEAERVIN 649
           D A  V +
Sbjct: 543 DAARWVFD 550


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 204/707 (28%), Positives = 356/707 (50%), Gaps = 48/707 (6%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G +++A+ L+ ++    + +   +   + L AC+   + + G ++H   ++ G ++   V
Sbjct: 78  GFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVV 137

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
             ++L +Y                                +M  +D AC+ FD MP RD+
Sbjct: 138 ETSLLCMYG-------------------------------EMSCLDDACKAFDTMPIRDV 166

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
             +++++    +NG    G+ +F +M    V  D+ +  SV   C + G L  GR +H  
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGY 226

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V +       S+ N+LI MY   G++  A ++FE     +     +  M+      G  +
Sbjct: 227 VVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMT--APWTPMISCYNQSGCFQ 284

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQAMKSGFEAYTS-VSN 327
           EAL  F  M    + P+++T V V+  C C R+G       VH   ++   +     +  
Sbjct: 285 EALNVFAKMQEFKMEPNQVTMVGVL--CACARLGRVKEGRSVHGFVIRRAMDPELDFLGP 342

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + +Y+  G + +   +F  ++EK I+SWNT+IS + +      A+L +++MQ+ G+ P
Sbjct: 343 ALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMP 402

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D ++  S L++ G I   ++   IH ++   G   +  V NALI  YAK   +  A ++F
Sbjct: 403 DSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMF 461

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  ++++TWN++I GF  NG+ V+ +  F ++ M+ ++ D+ T    + +C+ +  L 
Sbjct: 462 EKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLE 521

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +H  ++   L     L  A+  +Y+KCG+L  +  VF+ M E+  +SW+ +I+ Y 
Sbjct: 522 KGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYG 581

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG+    +S F  M   G IKP+  TF  +LSACSHAG V++G   F+SM +++G  P 
Sbjct: 582 MHGQINATISLFNQMLGSG-IKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPK 639

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            DH +CM+DLL RAG L+ A ++I S    A S  W AL + C  H  + + + I   LL
Sbjct: 640 HDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLL 699

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +      Y LLSNIYA  G W++   +R ++K  G+ K PG S I
Sbjct: 700 DVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTI 746



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 164/605 (27%), Positives = 283/605 (46%), Gaps = 46/605 (7%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           QLHA+    GL  +P  +  ++  Y       S KRVF     PD + W   +       
Sbjct: 19  QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIK------ 72

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                C V+    +  + +Y+ M+       Y+D              +  N+ F SVL 
Sbjct: 73  -----CYVWGGFFEEAVSLYHEMV-------YQD------------QTQISNFVFPSVLK 108

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C   G L  G ++H  V K GF     V  +L+ MY     + DACK F+     + D 
Sbjct: 109 ACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMP--IRDV 166

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           ++++ ++      G+  E L  F  M+  ++ P  +T +SV  AC      R+G  VH  
Sbjct: 167 VAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGY 226

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++   E+  S++N+ I MY   G +  A  +F  +  +    W  MIS Y Q    + A
Sbjct: 227 VVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEA 286

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ-VSNALIS 429
           +  + +MQ   + P++ T   +L   A  G ++    +H FV    +   +  +  AL+ 
Sbjct: 287 LNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALME 346

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YA    ++  +++F  +  + I++WNTLI+ F  NG P + L  F ++    L PD Y+
Sbjct: 347 LYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 406

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L+ +LS+C  IS  + G QIHGY++K    +   + NA+I +YAKCG +  + ++F  + 
Sbjct: 407 LASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIK 465

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           EK  ++WN++I  ++Q+G   EA++ F  M  +  +K D+ TF +V+ ACSH G ++ G 
Sbjct: 466 EKSLVTWNSMICGFSQNGYSVEAITLFDQMY-MNCVKMDKLTFLSVIQACSHLGYLEKGK 524

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACA 668
            +   ++  YG        + + D+  + G L  A  V +   +  RS  +W  + +   
Sbjct: 525 WVHHKLIM-YGLRKDSYLDTALTDMYSKCGELQMAHGVFD--RMSERSIVSWSVMIAGYG 581

Query: 669 AHGNL 673
            HG +
Sbjct: 582 MHGQI 586



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/547 (24%), Positives = 262/547 (47%), Gaps = 46/547 (8%)

Query: 30  NLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           N  ++G   + L +F Q+  S  ++PD  ++ +   AC+ L +   G  +H Y +R  ++
Sbjct: 175 NFVQNGQASEGLDMFSQM-ISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIE 233

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           +   + N+++ +Y    DL S +R+F  +       WT  +S                  
Sbjct: 234 SNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISC----------------- 276

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                  YN   +GC +       + +F +M +  +  +  +   VL  C   G ++ GR
Sbjct: 277 -------YNQ--SGCFQE-----ALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGR 322

Query: 209 QLHSLVTKSGFSCLVSVVN-ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            +H  V +      +  +  AL+ +Y + GN+ D  KVFE  K      +S+N ++    
Sbjct: 323 SVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTI--LSWNTLISIFT 380

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSG-FEAYT 323
             G+ EEAL+ F  M    L P   +  S +SAC      ++G Q+H   +K+G F  + 
Sbjct: 381 RNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF- 439

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V NA I MY+ CG +  A  +F +++EK +V+WN+MI  ++Q      AI  + +M   
Sbjct: 440 -VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMN 498

Query: 384 GIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++ D+ TF S++ +    G++E  + +H  + + G+  +  +  AL   Y+K   ++ A
Sbjct: 499 CVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMA 558

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           + +F  MS R+I++W+ +I G+ ++G     +  F+++L S ++P++ T    LS+C+  
Sbjct: 559 HGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHA 618

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNAL 559
            ++  GK     + +  +  K      M+ L ++ GDL+ + ++  ++    ++  W AL
Sbjct: 619 GAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGAL 678

Query: 560 ISAYAQH 566
           ++    H
Sbjct: 679 LNGCRIH 685



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 174/370 (47%), Gaps = 19/370 (5%)

Query: 292 LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           + ++ +   C       Q+HA    +G   +   S   I  Y+  G  + +  +F    +
Sbjct: 2   ILYMPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPK 61

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLL-ASSGF--IEMVEM 407
            D   W  +I  Y        A+  Y EM      +   F F S+L A SGF  + +   
Sbjct: 62  PDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGK 121

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  V   G  ++  V  +L+  Y +   +  A + F  M  R+++ W++++  F+ NG 
Sbjct: 122 VHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQ 181

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             +GL  FS+++   + PD  T+     +C+ + SLR G+ +HGYV++  + S  SL N+
Sbjct: 182 ASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNS 241

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y K GDL  + R+F  +  + T  W  +IS Y Q G  +EA++ F  MQ+  +++P
Sbjct: 242 LIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEF-KMEP 300

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI------PAEDHLS-CMLDLLGRAGY 640
           +Q T   VL AC+  G V +G  +       +GF+      P  D L   +++L    G 
Sbjct: 301 NQVTMVGVLCACARLGRVKEGRSV-------HGFVIRRAMDPELDFLGPALMELYADTGN 353

Query: 641 LDEAERVINS 650
           L +  +V  +
Sbjct: 354 LRDCHKVFET 363



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 44/314 (14%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           ++ +L  N  ++  +R+G  ++AL LFVQ+  +  L PD YSL+++L+AC  +  +  G 
Sbjct: 366 EKTILSWNTLISIFTRNGQPEEALLLFVQMQ-TQGLMPDSYSLASSLSACGTISFSQLGA 424

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+H Y ++ G                N  D V    +       D+Y+   F+ +  KM 
Sbjct: 425 QIHGYIIKTG----------------NFNDFVQNALI-------DMYAKCGFVHSANKM- 460

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                   F+K+ ++ L  +N+MI G ++NGY    I LF +M+   V+ D  +F SV+ 
Sbjct: 461 --------FEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQ 512

Query: 198 VCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C   G LE G+ +H  +   G      +  AL  MY  CG +  A  VF+         
Sbjct: 513 ACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSI-- 570

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMK 316
           +S++VM+ G    G++   +  F  ML + ++P+++TF+ ++SAC         HA A++
Sbjct: 571 VSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSAC--------SHAGAVE 622

Query: 317 SGFEAYTSVSNAAI 330
            G   + S+S   +
Sbjct: 623 EGKLYFNSMSEFGV 636


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 210/629 (33%), Positives = 333/629 (52%), Gaps = 36/629 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+ + T      + +  +D A  +F  +P+ DL +YN +I   + N      + L+  + 
Sbjct: 41  DLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLR 100

Query: 182 K-LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           K   +  DN+++A V+S   +  L      HS+V  +GF   + V +A++  YF    V 
Sbjct: 101 KSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIV--AGFGSDLFVGSAIVACYFKFSRVA 158

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A KVF+       D + +N M+ GL      +EA++ F DM+   +      F S   A
Sbjct: 159 AARKVFDGMLER--DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGI-----GFDSTTVA 211

Query: 301 CLCPRV--------GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
            + P V        G  +   AMK GF ++  V      +YS CG+I+ A ++F ++ + 
Sbjct: 212 AVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQP 271

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEM----------QSVGIRPDEFTFGSLLASSGFI 402
           D+VS+N MIS Y   N   S++  + E+            VG+ P  F FG L       
Sbjct: 272 DLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHL------- 324

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            +   IH F   +G+++N  VS AL + Y++   I+ A  +F   S +++ +WN +I+G+
Sbjct: 325 HLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGY 384

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             NG   + +  F E+   E+RP+  T++  LS+CA++ +L  GK +H  + + +  S +
Sbjct: 385 AQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNI 444

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +  A+I +YAKCG +  + R+F+MM EK+ ++WNA+IS Y  HG G EA++ F  M   
Sbjct: 445 FVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH- 503

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
            R+ P   TF +VL ACSHAGLV +G  IF SMV+D+GF P  +H +CM+DLLGRAG LD
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           +A   I    ++     W AL  AC  H +  L R+ +  L E +      YVLLSNIY+
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYS 623

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A   + EAA++R ++KR  + K PGC+ I
Sbjct: 624 AGQNYPEAASVRGVVKRRKLAKTPGCTLI 652



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 266/593 (44%), Gaps = 50/593 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N+ +   S +     A+ L+  +  S  L+PD ++ +  ++  ++L        LH
Sbjct: 73  LFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGL---LLH 129

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+++ AG  +   V + I++ Y     + + ++VF  +   D   W              
Sbjct: 130 AHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLW-------------- 175

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VC 199
                            N M++G  +N   D  I +F +M K  +  D+ + A+VL  V 
Sbjct: 176 -----------------NTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVA 218

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G  +  L  K GF     V+  L  +Y  CG +  A  +F +      D +SY
Sbjct: 219 ELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQ--PDLVSY 276

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAM 315
           N M+ G       E ++  F+++LV+  + +  + V ++     P     +   +H    
Sbjct: 277 NAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPV-FFPFGHLHLTRCIHGFCT 335

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           KSG  + +SVS A  T+YS   +I+ A ++F    EK + SWN MIS YAQ  L   AI 
Sbjct: 336 KSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAIS 395

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + EMQ   +RP+  T  S+L   A  G + + + +H  +      +NI VS ALI  YA
Sbjct: 396 LFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYA 455

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   I +A ++F  M  +N +TWN +I+G+ L+G+  + L  F+E+L S + P   T   
Sbjct: 456 KCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLS 515

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFNMMIE 550
            L +C+    +R G +I   ++ ++    +    A M+ L  + G+LD +L  +  M +E
Sbjct: 516 VLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVE 575

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
                W AL+ A   H   K+A     A   +  + P    +  +LS    AG
Sbjct: 576 PGPPVWGALLGACMIH---KDANLARLASDKLFELDPQNVGYYVLLSNIYSAG 625



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 95/218 (43%), Gaps = 5/218 (2%)

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           GI      F +L+     +  +   HA + +NG+  ++     L    +  + I QA  +
Sbjct: 5   GIASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLL 64

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISS 502
           F  +   ++  +N LI  F LN  P   +  ++ L  S  L PD +T +  +S  + +  
Sbjct: 65  FSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGL 124

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
                      +     S + +G+A++  Y K   +  + +VF+ M+E+DT+ WN ++S 
Sbjct: 125 GLLLHAHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSG 181

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
             ++    EA+  F  M   G I  D  T  AVL   +
Sbjct: 182 LVKNSCFDEAILIFGDMVK-GGIGFDSTTVAAVLPGVA 218



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           +S++ L   N  ++  +++G  + A+ LF ++    +++P+  ++++ L+ACA L   + 
Sbjct: 369 SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKC-EVRPNPVTVTSILSACAQLGALSL 427

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +H    R   ++   V+  ++ +Y     +   +R+FS                   
Sbjct: 428 GKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFS------------------- 468

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                        MP+++   +NAMI+G   +GY    + LF EM    V     +F SV
Sbjct: 469 ------------MMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSV 516

Query: 196 LSVCD-AGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           L  C  AGL+  G ++  S+V   GF  L      ++ +    GN+  A
Sbjct: 517 LYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 214/718 (29%), Positives = 372/718 (51%), Gaps = 47/718 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +  G  Q+A+ LF Q+     LKP+  S  + L+AC       FG Q+H
Sbjct: 117 VVSWNAMISGYALHGRGQEAVDLFYQMQRE-GLKPNQNSFISILSACQTPIVLEFGEQIH 175

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++  +AG ++  +V+  ++++Y     L   ++VF+E++  +V SWT             
Sbjct: 176 SHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWT------------- 222

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  ++G       LF+++ +   + +  SFAS+L  C 
Sbjct: 223 ------------------AMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACT 264

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   LE G +LH+ + ++G    V V NALI+MY  CG++ +A +VF+  +    + +S+
Sbjct: 265 NPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRS--PNRVSW 322

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV----GYQVHAQAM 315
           N M+ G    G +EEA   FRDM     +P   T+ S+++ C   R     G ++H+Q +
Sbjct: 323 NAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAIC-ADRADLNRGKELHSQIV 380

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++ +EA  +V+ A I+MY+ CG ++EA  +F ++ EK+ VSWN  I+   +    + A  
Sbjct: 381 RTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQ 440

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYA 432
            + +M+   + PD  TF +LL S    E  E    IH  +   G+++N  V+NALIS Y 
Sbjct: 441 VFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYG 500

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           +  ++  A ++F+ +  R++ +WN +I  ++ +G        F +      + D+YT   
Sbjct: 501 RCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFIN 560

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L + A +  L  G++IHG V K  L   + +   +I +Y+KCG L  +  VF  + EKD
Sbjct: 561 VLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKD 620

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            + WNA+++AY     G++A+  F+ M+  G + PD AT+T+VL+AC+  G ++ G + F
Sbjct: 621 VVCWNAMLAAYNHSDHGQDALKLFQQMRLEG-VNPDSATYTSVLNACARLGAIEHGKK-F 678

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            + + +        H +CM+  LGRA  L EAE  I     ++ +  W +L  AC  H N
Sbjct: 679 HTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHN 738

Query: 673 LRLGRIIAGLLLE-REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + L       LL+ + Q  P+V   L NIYAAAG WE+ + I+  ++  G++    C+
Sbjct: 739 VGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLAPKSCT 796



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 189/632 (29%), Positives = 318/632 (50%), Gaps = 22/632 (3%)

Query: 105 ARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           A+ L   K+V   +++    PD+Y     +S  +K G ++ A  VF  M D+D+  +NAM
Sbjct: 64  AKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAM 123

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGF 219
           I+G   +G     + LF +M +  ++ +  SF S+LS C   + LEFG Q+HS +TK+G+
Sbjct: 124 ISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGY 183

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              V+V  ALI MY  CG++  A KVF E +    + +S+  M+ G    G  +EA + F
Sbjct: 184 ESDVNVSTALINMYCKCGSLELARKVFNEMRER--NVVSWTAMISGYVQHGDSKEAFVLF 241

Query: 280 RDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
           + ++ +  +P++++F S++ AC  P     G ++HA   ++G E    V NA I+MY+ C
Sbjct: 242 QKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALISMYARC 301

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G +  A  +F  L+  + VSWN MI+ Y +      A   + +MQ  G +PD FT+ SLL
Sbjct: 302 GSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLL 360

Query: 397 A---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
           A       +   + +H+ +       ++ V+ ALIS YAK   +++A ++F+ M  +N +
Sbjct: 361 AICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPEKNAV 420

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN  I     +G   +  Q F ++   ++ PD  T    L+SC        G+ IHG +
Sbjct: 421 SWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKI 480

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
            +  ++S   + NA+I++Y +CG L  +  VF  +  +D  SWNA+I+AY QHG    A 
Sbjct: 481 DQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAF 540

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F   +  G  K D+ TF  VL A ++   +D G +I   +V   G       L+ ++ 
Sbjct: 541 DLFIKYKSEGG-KGDKYTFINVLRAIANLEDLDAGRKIH-GLVEKAGLEKDIRILTTLIK 598

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWW-ALFSAC--AAHGNLRLGRIIAGLLLEREQDK 690
           +  + G L +A  V   +++Q +    W A+ +A   + HG   L ++   + LE     
Sbjct: 599 MYSKCGSLRDAYSVF--KNVQEKDVVCWNAMLAAYNHSDHGQDAL-KLFQQMRLEGVNPD 655

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
            + Y  + N  A  G  E        LK   +
Sbjct: 656 SATYTSVLNACARLGAIEHGKKFHTQLKEAAM 687



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 122/237 (51%), Gaps = 14/237 (5%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  C +  SL  GK++H ++        + L N +I++Y+KCG ++ +  VF  M +KD 
Sbjct: 58  LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWNA+IS YA HG G+EAV  F  MQ  G +KP+Q +F ++LSAC    +++ G +I  
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREG-LKPNQNSFISILSACQTPIVLEFGEQIH- 175

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAH 670
           S +   G+    +  + ++++  + G L+ A +V N    + R  N   W A+ S    H
Sbjct: 176 SHITKAGYESDVNVSTALINMYCKCGSLELARKVFN----EMRERNVVSWTAMISGYVQH 231

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           G+ +   ++   L+ R   +P+     S +    G      ++ + LK    IKQ G
Sbjct: 232 GDSKEAFVLFQKLI-RSGTQPNKVSFASIL----GACTNPNDLEQGLKLHAYIKQAG 283


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  335 bits (859), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 204/659 (30%), Positives = 340/659 (51%), Gaps = 13/659 (1%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           L A  ++ G     +  N  L    ++  L   + +F ++ + +++S    LSA +  G 
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +  A  +F   P R+   +  M+      G     + LFR M    V  D  +  +VL++
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
               +      LH    K G    V V N L+  Y   G +  A +VF E      D ++
Sbjct: 150 PGCTV----PSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDK--DAVT 203

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAM 315
           YN MM G +  G   +AL  F  M  A +  +  TF S+++         +G+QVHA  +
Sbjct: 204 YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVL 263

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +S       V+N+ +  YS C  +D+   +F  + E+D VS+N +I+ YA      + + 
Sbjct: 264 RSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLR 323

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYA 432
            + EMQ +G       + ++L+ +G +  V +   IHA + + G+ +   + NALI  Y+
Sbjct: 324 LFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYS 383

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +  A   F N S ++ I+W  LI G++ NG   + LQ FS++  + LRPD  T S 
Sbjct: 384 KCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSS 443

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            + + + ++ +  G+Q+H Y++++   S +  G+ ++ +YAKCG LD +LR F+ M E++
Sbjct: 444 IIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERN 503

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
           +ISWNA+ISAYA +GE K A+  F+ M   G   PD  TF +VL+ACSH GL D+  + F
Sbjct: 504 SISWNAVISAYAHYGEAKNAIKMFEGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYF 562

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             M + Y   P ++H +C++D LGR G   + ++++     +A    W ++  +C  HGN
Sbjct: 563 HLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGN 622

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L R+ A  L   E    + YV+LSNIYA AG WE+AA ++++++  GV K+ G SW+
Sbjct: 623 QELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWV 681



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 156/616 (25%), Positives = 269/616 (43%), Gaps = 80/616 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFV--------------QIHSSHKLKPDIYSL------ 60
           +  LN+ L+  S SG    A HLF+              + H++     D  SL      
Sbjct: 74  IFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLG 133

Query: 61  ------STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
                   T+    NL      + LH +A++ GL  +  V NT+L  Y     L + +RV
Sbjct: 134 EGVIPDRVTVTTVLNLPGCTVPS-LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+ + D  ++   +  C+K                                G     +
Sbjct: 193 FLEMHDKDAVTYNAMMMGCSK-------------------------------EGLHTQAL 221

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITM 232
            LF  M +  +   +++F+S+L+V  AG+  L  G Q+H+LV +S     V V N+L+  
Sbjct: 222 QLFAAMRRAGIPATHFTFSSILTVA-AGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDF 280

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C  + D  ++F+E      D++SYNV++   A        L  FR+M         L
Sbjct: 281 YSKCDCLDDMRRLFDEMPER--DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 338

Query: 293 TFVSVMS-ACLCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
            + +++S A   P V  G Q+HAQ +  G  +   + NA I MYS CG +D A   F+  
Sbjct: 339 PYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR 398

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-- 407
            EK  +SW  +I+ Y Q      A+  + +M+  G+RPD  TF S++ +S  + M+ +  
Sbjct: 399 SEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGR 458

Query: 408 -IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H+++  +G  +++   + L+  YAK   + +A + F  M  RN I+WN +I+ +   G
Sbjct: 459 QLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYG 518

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLG 525
                ++ F  +L     PD  T    L++C+  + L      + +++K+   IS     
Sbjct: 519 EAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPWKEH 577

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE----KDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
            A +      G + C  +V  M++E     D I W +++ +   HG  + A     A   
Sbjct: 578 YACVI--DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV---AADK 632

Query: 582 VGRIKPDQATFTAVLS 597
           +  ++P  AT   +LS
Sbjct: 633 LFGMEPTDATPYVILS 648



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 23/232 (9%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SN S++  +     +    ++G +++AL LF  +  +  L+PD  + S+ + A ++L   
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA-GLRPDRATFSSIIKASSSLAMI 454

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G QLH+Y +R+G K+     + ++ +Y     L    R F E+   +  SW   +SA 
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514

Query: 134 TKMGHVDYACEVFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRD 188
              G    A ++F+ M     + D   + +++  C+ NG  D  +  F  M H+  +   
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 574

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              +A V+          GR            C   V   L+ M F    ++
Sbjct: 575 KEHYACVIDT-------LGR----------VGCFSQVQKMLVEMPFKADPII 609


>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
 gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
          Length = 643

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 205/622 (32%), Positives = 331/622 (53%), Gaps = 16/622 (2%)

Query: 97  TILSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
           +IL    +ARDL + K+   EI       D Y     + A  K G V  A EVFD++  R
Sbjct: 17  SILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRR 76

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
           ++  +  M+    +NG+    +GLFRE+    +  DN +  S L  C  AG LE GR +H
Sbjct: 77  NIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIH 136

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           +     G+   + V  AL++MY  CG++ +A  VF  A     + +S+N M+   A  G 
Sbjct: 137 ASARSLGYESEIIVATALVSMYGKCGHLEEAKAVF--ATLVERNRVSWNAMLAAYAQNGH 194

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCP-RVGYQVHAQAMKSGFEAYTSVSNAAI 330
            EEA+  +R M    ++P   TFVSV+         G ++H Q ++SGF + T+++NA +
Sbjct: 195 CEEAVRLYRLMCFEGIKPDATTFVSVLDGWKGEGEHGTRIHDQVLESGFGSNTTLANALV 254

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYL--EMQSVGIRP 387
           +MY S G++D+A  +F  + EK +VSWN M++ YAQ    G++  L +   EM+   + P
Sbjct: 255 SMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEP 314

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  TF +LL   A++GF+E    IHA V   G+++ + V  ALI+ Y++   +  A  +F
Sbjct: 315 NSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVF 374

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            ++  +N+++WN LI  +  +G   + L    ++ +  L+PD++T    L +C+   +L 
Sbjct: 375 DSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEALA 434

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAY 563
            GK IH  +  + L    ++G A+I LY KCG L+ +  VF +M   ++ ++WN++++A 
Sbjct: 435 EGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAA 494

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
              G  ++ V     M   G I PD+ TF +VL ACSH G +  G  +F S   DYG   
Sbjct: 495 CTKGGLEDCVEIIHMMGLEG-IMPDELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIAT 553

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
              H  C++D+LGR G L+EA+ V+N    QA    W  L  AC  H +   GR  A  +
Sbjct: 554 NTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYV 613

Query: 684 LEREQDKPSVYVLLSNIYAAAG 705
           +E +    + Y LLS +++ AG
Sbjct: 614 IELDPQNAAPYALLSTMFSVAG 635



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 165/598 (27%), Positives = 281/598 (46%), Gaps = 68/598 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +    I L   + +GH ++AL LF +I S   +  D  +L + L ACA   +   G  +H
Sbjct: 78  IFSWTIMLGAYADNGHGREALGLFREIQS-RGMAIDNVTLVSALKACAVAGDLEEGRGIH 136

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A A   G ++   VA  ++S+Y     L   K VF+ +   +  SW   L+A  + GH +
Sbjct: 137 ASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCE 196

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  ++  M              C E                  ++ D  +F SVL    
Sbjct: 197 EAVRLYRLM--------------CFEG-----------------IKPDATTFVSVLDGWK 225

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISY 259
            G  E G ++H  V +SGF    ++ NAL++MY + G V DA  VF+  A+  V   +S+
Sbjct: 226 -GEGEHGTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTV---VSW 281

Query: 260 NVMMDGLASVGRVEEALIRF---RDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQ 313
           N M+   A  GR  +A+  F    +M  A + P+ +TFV+++ AC        G ++HA+
Sbjct: 282 NAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAE 341

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
               G  +  SV  A I MYS CG +  A  +F  +  K++VSWN +I +YA    G+ A
Sbjct: 342 VASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEA 401

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISA 430
           +  + +M+  G++PD+FTF S+L +    E +   + IHA +  +G+  +  +  ALI+ 
Sbjct: 402 LGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGLERDEAIGTALINL 461

Query: 431 YAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELL----MSELRP 485
           Y K   ++QA  +F +M S RN++TWN+++      G    GL+   E++    +  + P
Sbjct: 462 YGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKG----GLEDCVEIIHMMGLEGIMP 517

Query: 486 DEYTLSVALSSCARISSLRHGKQIH-----GYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           DE T    L +C+   S++ G  +       Y +  N    + +    + +  + G L+ 
Sbjct: 518 DELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCV----VDILGRVGRLEE 573

Query: 541 SLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +  V N M  + + ++W  L+ A   H + ++     +A   V  + P  A   A+LS
Sbjct: 574 AQEVLNRMPFQANDVAWMTLLGACRIHRDFEQG---RRAADYVIELDPQNAAPYALLS 628



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 159/362 (43%), Gaps = 56/362 (15%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHK--LKPDIYSLSTTLAACANLRNAA 74
           +++ ++  N  L   +++G Y  A+ LF ++    +  ++P+  +    L ACA      
Sbjct: 274 AEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLE 333

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++HA     GL +   V   ++++Y    +LV  K VF                   
Sbjct: 334 AGRKIHAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVF------------------- 374

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                       D +P ++L  +N +I     +G     +G+ ++M    ++ D ++F S
Sbjct: 375 ------------DSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFIS 422

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C A   L  G+ +H+L+  SG     ++  ALI +Y  CG++  A  VF + K   
Sbjct: 423 VLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRR 482

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            + +++N M+    + G +E+ +     M +  + P ELTF+SV+ AC         H  
Sbjct: 483 -NLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFAC--------SHGG 533

Query: 314 AMKSGFEAYTSVSN----AAITMYSSC--------GKIDEACMIFARLQ-EKDIVSWNTM 360
           +++ G + + S       A  T +  C        G+++EA  +  R+  + + V+W T+
Sbjct: 534 SIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTL 593

Query: 361 IS 362
           + 
Sbjct: 594 LG 595


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 208/666 (31%), Positives = 346/666 (51%), Gaps = 46/666 (6%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +HA+  + G +      N +++LY     L   + VF E+   +  +WTT +    
Sbjct: 96  LGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHL 155

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           ++  V+    VF                             + REM+ +    + ++ + 
Sbjct: 156 QVNDVE---SVFR----------------------------IAREMYWVGEEFNEHTCSV 184

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KG 251
           +L  CD+   L  G Q+H  V K GF   V V  +LI+MY  CG++  A KV+     K 
Sbjct: 185 ILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKD 244

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGY 308
             C     N M+      G  E+A+  F  +L + L P++ TF +V+SAC   +   V  
Sbjct: 245 VRC----LNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLR 300

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
            +H   +K G     SV NA +++Y   G ++EA   F  + E+++VSW  ++S Y +  
Sbjct: 301 VLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNG 360

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
            G+ A+  + ++  +G+  D   F +LL      + + +   IH FV   G + ++ V  
Sbjct: 361 NGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGT 420

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI  YAK  +++ A  +FH++  +NI+++N +++G++        +  FS+L +++++P
Sbjct: 421 ALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI-GADEEDAMALFSQLRLADIKP 479

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  T +  LS  A  + L  GK +H Y++K    +  S+GNA+IT+YAKCG +  + ++F
Sbjct: 480 DSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLF 539

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M   D+ISWNA+ISAYA HG+G++A+  F+ M+      PD+ T  +VL ACS++GL+
Sbjct: 540 YSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKE-EFVPDEITILSVLQACSYSGLL 598

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           ++G  +F+ M + YG  P  +H +CM+DLLGRAGYL EA   IN          W  L  
Sbjct: 599 EEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVH 658

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
            C  HG+L  G+I +  LL+   ++   Y+L+SN+YA  G+  EAA +R ++    V K+
Sbjct: 659 VCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKE 718

Query: 726 PGCSWI 731
            G SWI
Sbjct: 719 AGSSWI 724



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 262/518 (50%), Gaps = 15/518 (2%)

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +G L  G+ +H+ + K G+       N L+ +Y     + DA  VF+E    V + I++ 
Sbjct: 91  SGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEM--LVRNTITWT 148

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
            ++ G   V  VE      R+M       +E T   ++ AC        G Q+H   +K 
Sbjct: 149 TLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKR 208

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF+    V  + I+MYS CG +  A  +++ L  KD+   N MIS Y +   G  AI  +
Sbjct: 209 GFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVF 268

Query: 378 LEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           L +   G+ P+++TF +++++      +E++ ++H      G    I V NA++S Y K+
Sbjct: 269 LHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKH 328

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +++A + F  M  RN+++W  L++G++ NG   + L+ FS++L   +  D    +  L
Sbjct: 329 GMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLL 388

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
             C+   +L  G QIHG+V+K   +  +S+G A+I LYAKC  L  +  VF+ +++K+ +
Sbjct: 389 DGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIV 448

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           S+NA++S Y    E ++A++ F  ++ +  IKPD  TF  +LS  +    +  G +   +
Sbjct: 449 SFNAILSGYIGADE-EDAMALFSQLR-LADIKPDSVTFARLLSLSADQACLVKG-KCLHA 505

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
            +   GF       + ++ +  + G + +A ++  S +    S +W A+ SA A HG  R
Sbjct: 506 YIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNY-LDSISWNAVISAYALHGQGR 564

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
              I+    +++E+  P    +LS + A   +GL EE 
Sbjct: 565 KALILFE-EMKKEEFVPDEITILSVLQACSYSGLLEEG 601



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 216/493 (43%), Gaps = 92/493 (18%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           ++ S  L AC +L N   G Q+H + ++ G      V  +++S+Y    DL + ++V+S 
Sbjct: 180 HTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSN 239

Query: 118 IQNPDV-----------------------------------YSWTTFLSAC--------- 133
           +   DV                                   Y++T  +SAC         
Sbjct: 240 LAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVL 299

Query: 134 --------------------------TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
                                      K G ++ A + F  M +R+L  + A+++G  +N
Sbjct: 300 RVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKN 359

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV 226
           G     +  F ++ +L V  D+  FA++L  C +   L  G Q+H  V K G+   VSV 
Sbjct: 360 GNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVG 419

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            ALI +Y  C  +  A  VF        + +S+N ++ G       E+A+  F  + +A 
Sbjct: 420 TALIDLYAKCRKLRSARLVFHSLLDK--NIVSFNAILSGYIGADE-EDAMALFSQLRLAD 476

Query: 287 LRPSELTFVSVMS-----ACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           ++P  +TF  ++S     ACL    G  +HA  +K+GFEA  SV NA ITMY+ CG I +
Sbjct: 477 IKPDSVTFARLLSLSADQACLVK--GKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGD 534

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           AC +F  +   D +SWN +IS YA    GR A++ + EM+     PDE T  S+L +  +
Sbjct: 535 ACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSY 594

Query: 402 IEMVEMIHAFVFIN------GIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNII 453
             ++E    F   N      GI   I+    ++    +   + +A   F N SP   + +
Sbjct: 595 SGLLE--EGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMS-FINRSPFSGSPL 651

Query: 454 TWNTLINGFLLNG 466
            W TL++   L+G
Sbjct: 652 LWRTLVHVCKLHG 664



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 36/275 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+   ++G+ + AL  F QI     +  D    +T L  C+  +N   G Q+H + ++ G
Sbjct: 353 LSGYVKNGNGKKALEGFSQILEL-GVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLG 411

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V   ++ LY   R L S + VF  +                             
Sbjct: 412 YVHDVSVGTALIDLYAKCRKLRSARLVFHSLL---------------------------- 443

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
              D+++  +NA+++G      ED  + LF ++   D++ D+ +FA +LS+  D   L  
Sbjct: 444 ---DKNIVSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVTFARLLSLSADQACLVK 499

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ LH+ + K+GF    SV NA+ITMY  CG++ DAC++F  +  Y+ D IS+N ++   
Sbjct: 500 GKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLF-YSMNYL-DSISWNAVISAY 557

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  G+  +ALI F +M      P E+T +SV+ AC
Sbjct: 558 ALHGQGRKALILFEEMKKEEFVPDEITILSVLQAC 592



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 45/219 (20%)

Query: 21  LLKLNISLANLSRSGHY----QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           LL  NI   N   SG+     +DA+ LF Q+  +  +KPD  + +  L+  A+      G
Sbjct: 442 LLDKNIVSFNAILSGYIGADEEDAMALFSQLRLA-DIKPDSVTFARLLSLSADQACLVKG 500

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             LHAY ++ G +A P V N ++++Y                                K 
Sbjct: 501 KCLHAYIIKTGFEANPSVGNAVITMY-------------------------------AKC 529

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +  AC++F  M   D   +NA+I+    +G     + LF EM K +   D  +  SVL
Sbjct: 530 GSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVL 589

Query: 197 SVCD-AGLLEFGRQL-HSLVTKSG-------FSCLVSVV 226
             C  +GLLE G  L + + +K G       F+C+V ++
Sbjct: 590 QACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLL 628


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 179/515 (34%), Positives = 283/515 (54%), Gaps = 39/515 (7%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTF---VSVMSACLCPRVGYQV 310
           D +SYN ++ G +S G    ++  +R +L   S+RP+ +T    + V SA     +G+ V
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV 168

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-------------------- 350
           H Q ++ GF AY  V +  + MY+  G I +A  +F  ++                    
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMI 228

Query: 351 -----------EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
                      ++D ++W TM++   Q  L   A+  +  M++ G+  D++TFGS+L + 
Sbjct: 229 EDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTAC 288

Query: 400 GFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G +  +E    IHA++       N+ V +AL+  Y+K   I+ A  +F  M+ RNII+W 
Sbjct: 289 GALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWT 348

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G+  N    + ++ FSE+ M  ++PD++TL   +SSCA ++SL  G Q H   L +
Sbjct: 349 AMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 408

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L+  +++ NA++TLY KCG ++ + R+F+ M   D +SW AL++ YAQ G+ KE +  F
Sbjct: 409 GLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLF 468

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M   G +KPD  TF  VLSACS AGLV+ G   FDSM  D+G +P +DH +CM+DL  
Sbjct: 469 EKMLANG-LKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYS 527

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R+G   EAE  I        +  W  L S+C   GN+ +G+  A  LLE +   P+ YVL
Sbjct: 528 RSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVL 587

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L +++AA G W E A++R  ++   V K+PGCSWI
Sbjct: 588 LCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWI 622



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 256/555 (46%), Gaps = 40/555 (7%)

Query: 48  HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNAR 106
           H++H L     ++ ++ A             +H   L+  L+A P  + N +L+ Y  + 
Sbjct: 3   HAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSG 62

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
            L   +RVF E+ +P++++    LSA      V     +F  MP+RD   YNA+ITG + 
Sbjct: 63  RLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSS 122

Query: 167 NGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS 224
            G     + L+R + + + VR    + ++++ V  A      G  +H  V + GF     
Sbjct: 123 TGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAF 182

Query: 225 VVNALITMYFNCGNVVDA------------------------CKVFEEAKGYVC-----D 255
           V + L+ MY   G + DA                        CK+ E+AKG        D
Sbjct: 183 VGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRD 242

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            I++  M+ GL   G   EAL  FR M    +   + TF S+++AC        G Q+HA
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHA 302

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
              ++ +E    V +A + MYS C  I  A  +F R+  ++I+SW  MI  Y Q      
Sbjct: 303 YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEE 362

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           A+ A+ EMQ  GI+PD+FT GS+++S   +  +E     H    ++G++  I VSNAL++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   I+ A+++F  MS  + ++W  L+ G+   G   + +  F ++L + L+PD  T
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVT 482

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM 548
               LS+C+R   +  G      + K++ I  +      MI LY++ G    +      M
Sbjct: 483 FIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542

Query: 549 IE-KDTISWNALISA 562
               D   W  L+S+
Sbjct: 543 PHSPDAFGWATLLSS 557



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 225/453 (49%), Gaps = 15/453 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S +G    ++ L+  +     ++P   +LS  +   + L + A G+ +H   L
Sbjct: 114 NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL 173

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  AY  V + ++ +Y     +   +RVF E++   V  + T ++   +   ++ A  
Sbjct: 174 RLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +F  M DRD   +  M+TG T+NG +   + +FR M    V  D Y+F S+L+ C A   
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVM 262
           LE G+Q+H+ +T++ +   V V +AL+ MY  C ++  A  VF   +   C + IS+  M
Sbjct: 294 LEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVF---RRMTCRNIISWTAM 350

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G       EEA+  F +M +  ++P + T  SV+S+C        G Q H  A+ SG 
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 410

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
             Y +VSNA +T+Y  CG I++A  +F  +   D VSW  +++ YAQ    +  I  + +
Sbjct: 411 MRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEK 470

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M + G++PD  TF  +L++   +G +E   +   +    +GI+        +I  Y+++ 
Sbjct: 471 MLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSG 530

Query: 436 RIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
           R K+A +    M  SP +   W TL++   L G
Sbjct: 531 RFKEAEEFIKQMPHSP-DAFGWATLLSSCRLRG 562



 Score = 47.4 bits (111), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P  + L+  L++ A+   L   +++   +   NL ++    NA+++  A    +    R+
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSRLVPDMERL 101

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA---VLSACSH 601
           F  M E+D +S+NALI+ ++  G    +V  ++A+     ++P + T +A   V SA S 
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 602 AGLVDD-GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
             L      ++       Y F+      S ++D+  + G + +A RV   Q ++A++
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVG-----SPLVDMYAKMGLIRDARRVF--QEMEAKT 211


>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
          Length = 807

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 210/741 (28%), Positives = 359/741 (48%), Gaps = 87/741 (11%)

Query: 11  AGNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AG+   +++LL ++        N  +A ++RSG   +AL ++ Q      L P  ++L++
Sbjct: 89  AGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMY-QGMLQEGLAPTNFTLAS 147

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            L+AC  +     G + H  A++ GL  +  V N +L +Y                    
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMY-------------------- 187

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                      TK G V  A  +FD MP  +   + AM+ G  + G  D  + LF  M +
Sbjct: 188 -----------TKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSR 236

Query: 183 LDVRRDNYSFASVLSVCD---------AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
             +R D  + +SVL  C          A  ++  + +H+LV + GF     V N+L+ +Y
Sbjct: 237 TGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLY 296

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
                + +A KVFE         +S+N+++ G   +G  E A+     M  +   P+E+T
Sbjct: 297 AKGMKMDEAIKVFESLSSVSI--VSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVT 354

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           + +++++C+  R                                 +  A  +F ++ +  
Sbjct: 355 YSNMLASCIKAR--------------------------------DVPSARAMFDKIPKPS 382

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHA 410
           + +WNT++S Y Q  L +  I  +  MQ   ++PD  T   +L+S    G  E+ + +H+
Sbjct: 383 VTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHS 442

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                 +  ++ V++ LI  Y+K  ++  A  IF+ M+ R+++ WN++I+G  ++    +
Sbjct: 443 ASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEE 502

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
                 ++  + + P E + +  ++ CAR+SS+  G+Q+H  VLK+     + +G ++I 
Sbjct: 503 AFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLID 562

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAK G++D +   FN MI K+ ++WN +I  YAQ+G G++AV  F+ M    + KPD  
Sbjct: 563 MYAKSGNMDDARLFFNCMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTT-KQKPDSV 621

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF AVL+ CSH+GLVD+    F+SM ++YG  P  +H +C++D L RA    E E VI  
Sbjct: 622 TFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGK 681

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +     W  L +AC  H N  LG   A  L   +   PS YVLLSNIYA  G   +A
Sbjct: 682 MPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDA 741

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           + +R L+   GV+K  G SW+
Sbjct: 742 SAVRALMSSRGVVKGRGYSWV 762



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 163/583 (27%), Positives = 283/583 (48%), Gaps = 50/583 (8%)

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           HA  L AGL A   + N ++ LY  +       R F  + +P+VYS+   +SA  + G +
Sbjct: 33  HARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAACRAGDL 92

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
             A ++  +MPDR+   +N +I     +G     + +++ M +  +   N++ ASVLS C
Sbjct: 93  AAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSAC 152

Query: 200 DA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            A   L+ GR+ H L  K G      V N L+ MY  CG+V DA ++F+       + +S
Sbjct: 153 GAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP--NEVS 210

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCP---------RVG 307
           +  MM GLA  G V++AL  F  M    +R   +   SV+ AC   C          ++ 
Sbjct: 211 FTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLA 270

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +HA  ++ GF +   V N+ + +Y+   K+DEA  +F  L    IVSWN +I+ Y Q 
Sbjct: 271 QSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQL 330

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
                A+     MQ  G  P+E T+ ++LAS                             
Sbjct: 331 GCYERAMEVLEFMQESGFEPNEVTYSNMLASC---------------------------- 362

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                K   +  A  +F  +   ++ TWNTL++G+       + +  F  +    ++PD 
Sbjct: 363 ----IKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDR 418

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            TL+V LSSC+R+ +   GKQ+H   ++  L + M + + +I +Y+KCG +  +L +FNM
Sbjct: 419 TTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNM 478

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M E+D + WN++IS  A H   +EA    K M++ G   P ++++ ++++ C+    +  
Sbjct: 479 MTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMF-PTESSYASMINLCARLSSIPQ 537

Query: 608 GTRIFDSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVIN 649
           G ++   ++ D G+     ++ C ++D+  ++G +D+A    N
Sbjct: 538 GRQMHAQVLKD-GY-DQNVYVGCSLIDMYAKSGNMDDARLFFN 578



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 8/238 (3%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N+   NA ISA  +   +  A  +   M  RN ++WNT+I     +G P + L+ +  +L
Sbjct: 75  NVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGML 134

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              L P  +TL+  LS+C  +++L  G++ HG  +K  L     + N ++ +Y KCG + 
Sbjct: 135 QEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVA 194

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            ++R+F+ M   + +S+ A++   AQ G   +A+  F  M   G I+ D    ++VL AC
Sbjct: 195 DAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTG-IRVDPVAVSSVLGAC 253

Query: 600 SHAGLVDDGT-------RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           + A   D          +   ++V   GF   +   + ++DL  +   +DEA +V  S
Sbjct: 254 AQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 311



 Score = 46.2 bits (108), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 14/155 (9%)

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC-SLRVFNMMIEKDTI 554
           S  R  S  + K  H  VL   L +   L N ++ LY+  G L C +LR F  +   +  
Sbjct: 19  SGGRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSG-LPCHALRAFRALPHPNVY 77

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQD-VGRIKPDQ--ATFTAVLSACSHAGLVDDGTRI 611
           S+NA ISA  + G+         A +D +GR+ PD+   ++  V++A + +G   +   +
Sbjct: 78  SYNAAISAACRAGD-------LAAARDLLGRM-PDRNAVSWNTVIAAVARSGSPGEALEM 129

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           +  M+ + G  P    L+ +L   G    LD+  R
Sbjct: 130 YQGMLQE-GLAPTNFTLASVLSACGAVAALDDGRR 163


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  335 bits (858), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 228/730 (31%), Positives = 354/730 (48%), Gaps = 44/730 (6%)

Query: 11  AGNSNTSKEL--LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA 68
           AGN     EL   L  N  +  L   G +  AL  + ++  S+ + PD Y+    + AC 
Sbjct: 65  AGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSN-VSPDKYTFPYVIKACG 123

Query: 69  NLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTT 128
            L N      +H  A   G     HV                           D+++ + 
Sbjct: 124 GLNNVPLCMVVHDTARSLGF----HV---------------------------DLFAGSA 152

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            +      G++  A  VFD++P RD  ++N M+ G  ++G  D  IG F EM       +
Sbjct: 153 LIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVN 212

Query: 189 NYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           + ++  +LS+C   G    G QLH LV  SGF     V N L+ MY  CGN++ A K+F 
Sbjct: 213 SVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFN 272

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CP 304
                  D +++N ++ G    G  +EA   F  M+ A ++P  +TF S + + L     
Sbjct: 273 TMPQ--TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 330

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R   +VH+  ++        + +A I +Y   G ++ A  IF +    D+     MIS Y
Sbjct: 331 RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGY 390

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
               L   AI  +  +   G+  +  T  S+L +   +  ++    +H  +    +   +
Sbjct: 391 VLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIV 450

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V +A+   YAK  R+  AY+ F  MS R+ + WN++I+ F  NG P   +  F ++ MS
Sbjct: 451 NVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMS 510

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             + D  +LS ALS+ A + +L +GK++HGYV++N   S   + + +I +Y+KCG+L  +
Sbjct: 511 GAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALA 570

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VFN+M  K+ +SWN++I+AY  HG  +E +  +  M   G I PD  TF  ++SAC H
Sbjct: 571 WCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAG-IHPDHVTFLVIISACGH 629

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGLVD+G   F  M  +YG     +H +CM+DL GRAG + EA   I S      +  W 
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWG 689

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HGN+ L ++ +  LLE +      YVLLSN++A AG W     +R L+K  G
Sbjct: 690 TLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKG 749

Query: 722 VIKQPGCSWI 731
           V K PG SWI
Sbjct: 750 VQKIPGYSWI 759



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 213/429 (49%), Gaps = 18/429 (4%)

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+   C DA +++  RQ+H+ V   G   + +  + ++ +Y  CG   DA  +F E +  
Sbjct: 16  SLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE-- 73

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPR 305
           +   + +N M+ GL  +G  + AL+ +  ML +++ P + TF  V+ AC       LC  
Sbjct: 74  LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLC-- 131

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
               VH  A   GF       +A I +Y+  G I +A  +F  L  +D + WN M+  Y 
Sbjct: 132 --MVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYV 189

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
           +     +AI  + EM++     +  T+  +L   A+ G       +H  V  +G   + Q
Sbjct: 190 KSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQ 249

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+N L++ Y+K   +  A ++F+ M   + +TWN LI G++ NGF  +    F+ ++ + 
Sbjct: 250 VANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG 309

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           ++PD  T +  L S     SLRH K++H Y++++ +   + L +A+I +Y K GD++ + 
Sbjct: 310 VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMAR 369

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           ++F   I  D     A+IS Y  HG   +A++ F+ +   G +  +  T  +VL AC+  
Sbjct: 370 KIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVT-NSLTMASVLPACAAV 428

Query: 603 GLVDDGTRI 611
             +  G  +
Sbjct: 429 AALKPGKEL 437



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 177/367 (48%), Gaps = 8/367 (2%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           QVH Q +  G     + S+  + +Y  CG+  +A  +F  L+ +  + WN MI       
Sbjct: 32  QVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYMLG 91

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
               A+L Y +M    + PD++TF  ++ + G +  V +   +H      G   ++   +
Sbjct: 92  WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGS 151

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI  YA N  I+ A ++F  +  R+ I WN ++ G++ +G     +  F E+  S    
Sbjct: 152 ALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMV 211

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  T +  LS CA   +   G Q+HG V+ +       + N ++ +Y+KCG+L  + ++F
Sbjct: 212 NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLF 271

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           N M + DT++WN LI+ Y Q+G   EA   F AM   G +KPD  TF + L +   +G +
Sbjct: 272 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG-VKPDSVTFASFLPSILESGSL 330

Query: 606 DDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
                +   +V     +P + +L S ++D+  + G ++ A ++   Q+I        A+ 
Sbjct: 331 RHCKEVHSYIVRHR--VPFDVYLKSALIDVYFKGGDVEMARKIFQ-QNILVDVAVCTAMI 387

Query: 665 SACAAHG 671
           S    HG
Sbjct: 388 SGYVLHG 394



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 3/275 (1%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           + +  ++    +H  V + G+      S+ ++  Y    R + A  +F  +  R  + WN
Sbjct: 22  SDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWN 81

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G  + G+    L  + ++L S + PD+YT    + +C  ++++     +H      
Sbjct: 82  WMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSL 141

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                +  G+A+I LYA  G +  + RVF+ +  +DTI WN ++  Y + G+   A+  F
Sbjct: 142 GFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTF 201

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M+    +  +  T+T +LS C+  G    GT++   +V   GF       + ++ +  
Sbjct: 202 CEMRTSYSMV-NSVTYTCILSICATRGNFCAGTQL-HGLVIGSGFEFDPQVANTLVAMYS 259

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           + G L  A ++ N+   Q  +  W  L +    +G
Sbjct: 260 KCGNLLYARKLFNTMP-QTDTVTWNGLIAGYVQNG 293


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 235/754 (31%), Positives = 373/754 (49%), Gaps = 68/754 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++    SG  +DA  LF  I        ++ + +  L+  A L     G  L 
Sbjct: 64  IIAWNSMISAYCNSGMLEDARILFDAISGG-----NVRTATILLSGYARL-----GRVLD 113

Query: 81  AYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA-CTKMGH 138
           A  +  G+     VA N ++S Y    D+   +R+F  + + DV SW + ++  C     
Sbjct: 114 ARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQM 173

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           VD A  +F +MP R+L  +  MI+G         G  +FR MH      D  +FASVLS 
Sbjct: 174 VD-AWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSA 232

Query: 199 C----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYV 253
                D G+LE    L  LV K+GF   V +  +++ +Y    + +D A K F+   G V
Sbjct: 233 VTGLQDLGVLEV---LRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFD---GMV 286

Query: 254 -CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA 312
             +  +++ M+  L+  GR++ A+  +    V S+ PS+   ++ ++ C     G    A
Sbjct: 287 ERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARC-----GRITEA 340

Query: 313 QAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           + +         VS NA IT Y   G +DEA  +F R+  ++ +SW  MI+ YAQ     
Sbjct: 341 RILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSE 400

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+     +   G+ P   +  S   +    G +E    +H+     G   N  V NALI
Sbjct: 401 EALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALI 460

Query: 429 SAYAK-------------------------------NERIKQAYQIFHNMSPRNIITWNT 457
           S Y K                               N  ++ A  IF NM  R++++W T
Sbjct: 461 SMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTT 520

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I+ +       + ++ F  +L    +P+   L++ LS C  + S + G+QIH   +K+ 
Sbjct: 521 IISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHG 580

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + S++ + NA++++Y KCG  D S +VF+ M E+D  +WN  I+  AQHG G+EA+  ++
Sbjct: 581 MDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYE 639

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M+ VG + P++ TF  +L+ACSHAGLVD+G + F SM  DYG  P  +H +CM+DLLGR
Sbjct: 640 HMESVG-VLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGR 698

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
            G +  AE+ I    I+  +  W AL  AC  H N  +GR  A  L   E      YV+L
Sbjct: 699 TGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVML 758

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNIY++ G+W E A +R+++K+ GV K+PGCSW+
Sbjct: 759 SNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWM 792



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 247/539 (45%), Gaps = 53/539 (9%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHKLDVRRDNY--- 190
           ++G +  A EVFD MP RD+  +N+MI+  C     ED  I LF  +   +VR       
Sbjct: 45  RLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARI-LFDAISGGNVRTATILLS 103

Query: 191 SFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCL--------------------VSVVNAL 229
            +A +  V DA  +  G  + +++   +  SC                     V+  N++
Sbjct: 104 GYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSM 163

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +T Y +   +VDA  +F++      + +++ VM+ G   + +  +    FR M      P
Sbjct: 164 VTGYCHSRQMVDAWNLFKQMPQR--NLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASP 221

Query: 290 SELTFVSVMSACLCPRVGYQ-------VHAQAMKSGFEAYTSVSNAAITMYS-SCGKIDE 341
            +  F SV+SA      G Q       +    +K+GFE+   +  + + +Y+     +D 
Sbjct: 222 DQSNFASVLSAV----TGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDI 277

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A   F  + E++  +W+TMI+  +      +AI  Y     V   P +    + LA  G 
Sbjct: 278 AIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR-DPVKSIPSQTALLTGLARCGR 336

Query: 402 IEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           I       A +    I   I VS NA+I+ Y +N  + +A ++F  M  RN I+W  +I 
Sbjct: 337 I-----TEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIA 391

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  NG   + L     L  + + P   +L+ +  +C+ I +L  G+Q+H   +K     
Sbjct: 392 GYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQF 451

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              + NA+I++Y KC +++   +VFN M  KDT+SWN+ I+A  Q+   ++A   F  M 
Sbjct: 452 NSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM- 510

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
               +  D  ++T ++SA + A   D+    F +M++++   P    L+ +L + G  G
Sbjct: 511 ----LSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE-KPNSPILTILLSVCGGLG 564



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/381 (20%), Positives = 171/381 (44%), Gaps = 50/381 (13%)

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S  +A I   +  G++ EA  +F  +  +DI++WN+MIS Y    +   A + +  +   
Sbjct: 34  SAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFDAISGG 93

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQ 442
            +R       + +  SG+  +  ++ A    +G+     V+ NA++S Y +N  I  A +
Sbjct: 94  NVRT------ATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARR 147

Query: 443 IFHNMSPRNIITWNTLINGF-----------LLNGFPVQGLQHFSELLMSELR------- 484
           +F  M  R++ +WN+++ G+           L    P + L  ++ ++   +R       
Sbjct: 148 LFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKG 207

Query: 485 -------------PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
                        PD+   +  LS+   +  L   + +   VLK    S + +G +++ +
Sbjct: 208 WDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNV 267

Query: 532 YAK-CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           Y +    LD +++ F+ M+E++  +W+ +I+A +  G    A++ +   +D  +  P Q 
Sbjct: 268 YTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYG--RDPVKSIPSQ- 324

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             TA+L+  +  G + +   +F+ + +     P     + M+    + G +DEA+ + + 
Sbjct: 325 --TALLTGLARCGRITEARILFEQIPD-----PIVVSWNAMITGYMQNGMVDEAKELFDR 377

Query: 651 QHIQARSDNWWALFSACAAHG 671
              +  + +W  + +  A +G
Sbjct: 378 MPFR-NTISWAGMIAGYAQNG 397


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 219/697 (31%), Positives = 363/697 (52%), Gaps = 58/697 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNA-AFGNQLHAYALRAGLK-AYPHVANTILSLYKNARDLVS 110
            + D  SLS  L+AC++L++  +FG  +H+  ++ G +     V N++++ Y        
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYY------- 313

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   ++G  + A EVF    +++L  +NAMI G  EN   
Sbjct: 314 ------------------------ELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRV 349

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF---SCLVSVV 226
           +  + +F+EM   + + D  +  +++S C D GLL  G+++H  + K G     C  SV 
Sbjct: 350 NEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEEC--SVG 406

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA---SVGRVEEALIRFRDML 283
           N+L+ +Y  C +   A  +F      + D IS+N M+ G +   S+G  EEA   F+ +L
Sbjct: 407 NSLLDLYMKCNDPSTARILFRTMP--MRDLISWNTMISGYSRNDSLG--EEAKAMFKGLL 462

Query: 284 VASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              L  +  T V+V+ +C CP+    G  VH+  +K GF    S +N+ I MY  CG   
Sbjct: 463 SEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSL 522

Query: 341 EACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLAS 398
            A  +   +    DI+SWNT I    Q  L   A+ A+  M S + + PD  T  S+L+ 
Sbjct: 523 AAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSV 582

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            G +++  +   IH       I  N++V NAL++ Y +    + A  IF ++  RN+ +W
Sbjct: 583 CGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSW 642

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N +I+GF  N   ++ LQ + +  M    P+E ++   + +C ++  LR GK IHG+V++
Sbjct: 643 NCMISGFAQNNEGLRALQFYKK--MEYFEPNEISIVGIICACTQLGDLRQGKNIHGHVVR 700

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L + + +  +++ +Y+KCG LD S+RVF    EK    WN++ISA+  HG G +++  
Sbjct: 701 FGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEI 760

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M + G +K  ++TF A+LSACSH+GL D+G + +  M+  +G IP  +H  C++D+L
Sbjct: 761 FWKMNNSG-VKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDML 819

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GRAG L EA + + S   +     W AL SAC+    L++   +A  LL  E +    YV
Sbjct: 820 GRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYV 879

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
            +SN+YA   +W  A  +R++L+  G++K  G S IG
Sbjct: 880 TMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSIIG 916



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 179/628 (28%), Positives = 305/628 (48%), Gaps = 35/628 (5%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D+  W T +    K G    +  VF +MP RD   +N+M++G   NG  +I    F+E
Sbjct: 196 DTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKE 255

Query: 180 MHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSGFS-CLVSVVNALITMYFNC 236
           M +   + D  S + VLS C     L  FG  +HS V K G+     SV N+LIT Y+  
Sbjct: 256 MVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYEL 315

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G    A +VF        + +++N M+ GL    RV EA+  F++M   + +P   T V+
Sbjct: 316 GFPEAAEEVFLSTSNK--NLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVT 372

Query: 297 VMSAC----LCPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           ++SAC    L P  G +VH   +K G      SV N+ + +Y  C     A ++F  +  
Sbjct: 373 IISACGDRGLLPE-GKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPM 431

Query: 352 KDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEM 407
           +D++SWNTMIS Y++ + LG  A   +  + S G+     T  +++ S      +   + 
Sbjct: 432 RDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKS 491

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNG 466
           +H+F+   G +T +  +N+LI  Y        A+ +  +++P  +II+WNT I G + NG
Sbjct: 492 VHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNG 551

Query: 467 FPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
                L+ F  +  +  L PD  TL   LS C  +     GK IH   LK  +   + + 
Sbjct: 552 LYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVK 611

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           NA++T+Y + GD + +  +F+ ++ ++  SWN +IS +AQ+ EG  A+  +K M+     
Sbjct: 612 NALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKKME---YF 668

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG-----FIPAEDHLSCMLDLLGRAGY 640
           +P++ +   ++ AC+  G +  G  I   +V  +G     FI A      ++D+  + G 
Sbjct: 669 EPNEISIVGIICACTQLGDLRQGKNIHGHVVR-FGLQTNVFISAS-----LVDMYSKCGR 722

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHG-NLRLGRIIAGLLLEREQDKPSVYVLLSN 699
           LD + RV  S   ++ +  W ++ SA   HG  L+   I   +     +   S ++ L +
Sbjct: 723 LDISIRVFESSAEKSIA-CWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLS 781

Query: 700 IYAAAGLWEEAANIRELL-KRTGVIKQP 726
             + +GL +E      L+ +  G+I  P
Sbjct: 782 ACSHSGLTDEGLKYYHLMIEHFGIIPTP 809



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 249/570 (43%), Gaps = 54/570 (9%)

Query: 59  SLSTTLAAC--ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           S+   L AC  A+   A     LH  AL++     P V  ++++ Y   RD+ S  +VF 
Sbjct: 63  SIVRALGACRGASREEADGVAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFD 122

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           E   PD+  W                               NA I+  T N      + L
Sbjct: 123 EAAAPDLILW-------------------------------NAAISALTLNCRYGDAVVL 151

Query: 177 FREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           FR M  +    D+ S   +LS    A  LE G   H +  K      +S+ N L+ MY  
Sbjct: 152 FRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAK 211

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG+   +  VF+       D  S+N M+ G    G  E +   F++M+ +S +  E++  
Sbjct: 212 CGDFYSSEVVFQRMPYR--DTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLS 269

Query: 296 SVMSACLCPR----VGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQ 350
            V+SAC   +     G  VH+  +K G+E  T SV N+ IT Y   G  + A  +F    
Sbjct: 270 CVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTS 329

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEM 407
            K++V+WN MI    + +    A+  + EM+S   +PD  T  +++++    G +   + 
Sbjct: 330 NKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKE 388

Query: 408 IHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN- 465
           +H ++   G I     V N+L+  Y K      A  +F  M  R++I+WNT+I+G+  N 
Sbjct: 389 VHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRND 448

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               +    F  LL   L     T+   + SC     L  GK +H ++LK   ++ +S  
Sbjct: 449 SLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAA 508

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIE----KDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           N++I +Y  CGD   SL  F+++       D ISWN  I    Q+G   +A+  F+ M  
Sbjct: 509 NSLIHMYICCGD---SLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHS 565

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              + PD  T  +VLS C +  L   G  I
Sbjct: 566 TLTLNPDSITLVSVLSVCGNLKLQSLGKSI 595



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 148/597 (24%), Positives = 272/597 (45%), Gaps = 55/597 (9%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +TS + L+  N  +  L  +    +A+ +F ++ S  K +PD+ +L T ++AC +     
Sbjct: 327 STSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRS--KNQPDVATLVTIISACGDRGLLP 384

Query: 75  FGNQLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            G ++H Y ++ G +     V N++L LY    D  + + +F  +   D+ SW T +S  
Sbjct: 385 EGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGY 444

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           ++           D + +       AM  G    G                    + + +
Sbjct: 445 SRN----------DSLGEEA----KAMFKGLLSEGL-------------------SCTLS 471

Query: 194 SVLSVCDAGL----LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +V++V  +      L FG+ +HS + K GF   VS  N+LI MY  CG+ + A  + E  
Sbjct: 472 TVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESI 531

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC---LCPR 305
              + D IS+N  + G    G   +AL  F+ M    +L P  +T VSV+S C       
Sbjct: 532 TP-MSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQS 590

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  +H  A+K   E    V NA +TMY   G  + A +IF+ L  +++ SWN MIS +A
Sbjct: 591 LGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFA 650

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQ 422
           Q N G  A+  Y +M+     P+E +   ++ +    G +   + IH  V   G+ TN+ 
Sbjct: 651 QNNEGLRALQFYKKMEY--FEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGLQTNVF 708

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +S +L+  Y+K  R+  + ++F + + ++I  WN++I+ F  +G  ++ ++ F ++  S 
Sbjct: 709 ISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSG 768

Query: 483 LRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           ++    T    LS+C+       G K  H  +    +I        ++ +  + G L  +
Sbjct: 769 VKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEA 828

Query: 542 LRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +    +  K     W AL+SA ++  E K    C    + +  ++P+ + +   +S
Sbjct: 829 HKFVESLPSKQAHGVWGALLSACSKKSELK---MCESVAKHLLCLEPENSGYYVTMS 882



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 205/423 (48%), Gaps = 15/423 (3%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH    KS       V  ++IT Y    +V  A +VF+EA     D I +N  +  L   
Sbjct: 85  LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAP--DLILWNAAISALTLN 142

Query: 270 GRVEEALIRFR---DMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
            R  +A++ FR   D+L      S +  +S  S       G   H  A+K   +   S+ 
Sbjct: 143 CRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLW 202

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  + MY+ CG    + ++F R+  +D  SWN+M+S      L   +   + EM     +
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 387 PDEFTFGSLLASSGFIEMV----EMIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAY 441
            DE +   +L++   ++ +    E +H+ V   G   T   V N+LI+ Y +    + A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F + S +N++TWN +I G + N    + +  F E + S+ +PD  TL   +S+C    
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQE-MRSKNQPDVATLVTIISACGDRG 381

Query: 502 SLRHGKQIHGYVLKNNLI-SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            L  GK++HGY++K   I  + S+GN+++ LY KC D   +  +F  M  +D ISWN +I
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 561 SAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           S Y+++   G+EA + FK +   G +    +T  AV+ +C     ++ G  +  S +  Y
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEG-LSCTLSTVVAVIPSCFCPQDLNFGKSV-HSFILKY 499

Query: 620 GFI 622
           GF+
Sbjct: 500 GFL 502



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 15/328 (4%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           V  +H     +  + +  V  ++I+AY++   +  A Q+F   +  ++I WN  I+   L
Sbjct: 82  VAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTL 141

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           N      +  F  ++      D  ++ + LS  +R  SL HG   HG  LK  L + +SL
Sbjct: 142 NCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSL 201

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            N ++ +YAKCGD   S  VF  M  +DT SWN+++S    +G  + +   FK M     
Sbjct: 202 WNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVR-SS 260

Query: 585 IKPDQATFTAVLSACSH-AGLVDDGTRIFDSMVNDYGFIPAEDHLS----CMLDLLGRAG 639
            + D+ + + VLSACSH   L   G  +  S++     +  ED  S     ++      G
Sbjct: 261 FQADEVSLSCVLSACSHLKDLFSFGESVHSSVIK----LGYEDTTSSVENSLITFYYELG 316

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
           + + AE V  S         W A+        N R+   +      R +++P V  L++ 
Sbjct: 317 FPEAAEEVFLSTS-NKNLVTWNAMIKGLVE--NDRVNEAMCMFQEMRSKNQPDVATLVTI 373

Query: 700 IYAAA--GLWEEAANIRELLKRTGVIKQ 725
           I A    GL  E   +   + + G I +
Sbjct: 374 ISACGDRGLLPEGKEVHGYIIKKGHIYE 401


>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
 gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
          Length = 551

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 184/534 (34%), Positives = 302/534 (56%), Gaps = 10/534 (1%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +H+ +  +GF+  + +   LI  Y   G+ V A KVF+         +S++  + G 
Sbjct: 16  GHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV--VSWSAQISGY 73

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  G  ++AL+ F DML A  + ++ T+ SV+ AC    C + G Q+     KS F +  
Sbjct: 74  SQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNL 133

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A + ++S CGK+++A  +F  ++E+D+VSWN +I  YA +     +   +  M   
Sbjct: 134 IVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQE 193

Query: 384 GIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ PD FTFGS+L +SG    +  V  IH  +   G  ++I +S +LI AYAK E +  A
Sbjct: 194 GMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASA 253

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           + ++ +M  +++I+   L+ G+  +  +  + L  F E+    ++ D+  L    + CA 
Sbjct: 254 HCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICAN 313

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           ISSL  G+QIH   LK      +++GNA+I +YAK G++  + R FN M EK+ ISW +L
Sbjct: 314 ISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSL 373

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I+ Y  HG G EA++ FK M+  G +KP+  TF ++L AC+H GL  +G   F++M++ Y
Sbjct: 374 ITGYGSHGHGHEAIALFKKMEYEG-LKPNDITFLSLLFACNHCGLTGEGWECFNNMISKY 432

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
             +P  +H SCM+DL  R G L+EA  +IN  +I+  +  W A+  AC  +GN+ L    
Sbjct: 433 NILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEA 492

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
           A  L + + +    YV+L++IYAAAG W+ A  +R+L++   + K PG S+I S
Sbjct: 493 AIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFIPS 546



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 226/453 (49%), Gaps = 40/453 (8%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           +K+G    A +VFD+MP+R +  ++A I+G ++NG     + +F +M +   + + +++ 
Sbjct: 43  SKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYG 102

Query: 194 SVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EE 248
           SVL  C  GL  L+ G Q+   + KS F+  + V +AL+ ++  CG + DA  +F   EE
Sbjct: 103 SVLRAC-TGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEE 161

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC------- 301
                 D +S+N ++   A  G   ++   FR M+   + P   TF SV+ A        
Sbjct: 162 R-----DVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVI 216

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
            +C     Q+H   ++ G+ ++ S+S + I  Y+ C  +  A  ++  +  KD++S   +
Sbjct: 217 RVC-----QIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTAL 271

Query: 361 ISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           ++ YA+  N    A+  + E+Q + ++ D+    S+    A+   + +   IHA      
Sbjct: 272 MTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCK 331

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              ++ + NALI  YAK+  IK A + F+ M  +N+I+W +LI G+  +G   + +  F 
Sbjct: 332 PTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFK 391

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL------GNAMIT 530
           ++    L+P++ T    L +C        G    G+   NN+ISK ++       + M+ 
Sbjct: 392 KMEYEGLKPNDITFLSLLFACNHC-----GLTGEGWECFNNMISKYNILPRAEHFSCMVD 446

Query: 531 LYAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
           L+A+ G L+ +  + N M I+ +   W A++ A
Sbjct: 447 LFARGGLLEEAYNLINKMNIKPNASLWGAILGA 479



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 122/269 (45%), Gaps = 36/269 (13%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G   D+  +F  +     + PD+++  + L A     +     Q+H   ++ G  ++  +
Sbjct: 178 GFSGDSFRMFRSMMQ-EGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISL 236

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           + +++  Y     L S                      C           ++  MP +D+
Sbjct: 237 SGSLIDAYAKCESLASAH--------------------C-----------LYKSMPMKDM 265

Query: 155 PVYNAMITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
               A++TG   ++ Y    + LF+E+ ++ ++ D+    S+ ++C +   L  GRQ+H+
Sbjct: 266 ISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHA 325

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L  K   +  V++ NALI MY   G + DA + F E +    + IS+  ++ G  S G  
Sbjct: 326 LALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEK--NVISWTSLITGYGSHGHG 383

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC 301
            EA+  F+ M    L+P+++TF+S++ AC
Sbjct: 384 HEAIALFKKMEYEGLKPNDITFLSLLFAC 412



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 3/179 (1%)

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           +L  C    + + G  IH  +L N   S + L   +I  Y+K GD   + +VF+ M E+ 
Sbjct: 3   SLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            +SW+A IS Y+Q+G  ++A+  F  M   G  K +Q T+ +VL AC+    +  G +I 
Sbjct: 63  VVSWSAQISGYSQNGCYQDALLVFLDMLRAG-FKANQFTYGSVLRACTGLRCLQRGMQI- 120

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
              +    F       S +LDL  + G +++A  +      +    +W A+  A A  G
Sbjct: 121 QGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMME-ERDVVSWNAIIGAYAVQG 178



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 66/268 (24%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           S +   AL LF +I   H +K D   L +    CAN+ + + G Q+HA AL+        
Sbjct: 279 SNYSSKALDLFKEIQQMH-MKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVA 337

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N ++ +Y  + ++    R F+E++  +V SWT+ ++     GH               
Sbjct: 338 MGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGH--------------- 382

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSL 213
                         G+E   I LF++M    ++ ++ +F S+L  C+          H  
Sbjct: 383 --------------GHE--AIALFKKMEYEGLKPNDITFLSLLFACN----------HCG 416

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           +T  G+ C            FN  N++    +   A+ + C       M+D  A  G +E
Sbjct: 417 LTGEGWEC------------FN--NMISKYNILPRAEHFSC-------MVDLFARGGLLE 455

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC 301
           EA      M   +++P+   + +++ AC
Sbjct: 456 EAYNLINKM---NIKPNASLWGAILGAC 480


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 193/587 (32%), Positives = 314/587 (53%), Gaps = 16/587 (2%)

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHS 212
           +++ +IT   +N        ++  M   D   DN+   SVL  C    + LL  G+++H 
Sbjct: 91  IHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL--GQEVHG 148

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            V K+GF   V V NALI MY   G++  A  +F++ +    D +S++ M+      G +
Sbjct: 149 FVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENK--DVVSWSTMIRSYDRSGLL 206

Query: 273 EEALIRFRDMLVASLRPSELTFVS---VMSACLCPRVGYQVHAQAMKSGFEAYTSVS--N 327
           +EAL   RDM V  ++PSE+  +S   V++     ++G  +HA  M++G    + V    
Sbjct: 207 DEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT 266

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MY  C  +  A  +F  L +  I+SW  MI+ Y   N     +  +++M   G+ P
Sbjct: 267 ALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFP 326

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +E T  SL+    ++G +E+ +++HAF   NG   ++ ++ A I  Y K   ++ A  +F
Sbjct: 327 NEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF 386

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            +   ++++ W+ +I+ +  N    +    F  +    +RP+E T+   L  CA+  SL 
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK IH Y+ K  +   M L  + + +YA CGD+D + R+F    ++D   WNA+IS +A
Sbjct: 447 MGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFA 506

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG G+ A+  F+ M+ +G + P+  TF   L ACSH+GL+ +G R+F  MV+++GF P 
Sbjct: 507 MHGHGEAALELFEEMEALG-VTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPK 565

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H  CM+DLLGRAG LDEA  +I S  ++     + +  +AC  H N++LG   A   L
Sbjct: 566 VEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFL 625

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             E  K    VL+SNIYA+A  W + A IR  +K  G++K+PG S I
Sbjct: 626 SLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSI 672



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 240/512 (46%), Gaps = 47/512 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D + + + L AC  + +   G ++H + ++ G      V N ++ +Y     L   + +F
Sbjct: 123 DNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLF 182

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            +I+N DV SW+T + +  + G +D A                               + 
Sbjct: 183 DKIENKDVVSWSTMIRSYDRSGLLDEA-------------------------------LD 211

Query: 176 LFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSC---LVSVVNALIT 231
           L R+MH + V+       S+  V  +   L+ G+ +H+ V ++G  C    V +  ALI 
Sbjct: 212 LLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNG-KCGKSGVPLCTALID 270

Query: 232 MYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           MY  C N+  A +VF+  +K  +   IS+  M+        + E +  F  ML   + P+
Sbjct: 271 MYVKCENLAYARRVFDGLSKASI---ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPN 327

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E+T +S++  C       +G  +HA  +++GF     ++ A I MY  CG +  A  +F 
Sbjct: 328 EITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFD 387

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
             + KD++ W+ MIS+YAQ N    A   ++ M   GIRP+E T  SLL   A +G +EM
Sbjct: 388 SFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEM 447

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + IH+++   GI  ++ +  + +  YA    I  A+++F   + R+I  WN +I+GF +
Sbjct: 448 GKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAM 507

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMS 523
           +G     L+ F E+    + P++ T   AL +C+    L+ GK++ H  V +     K+ 
Sbjct: 508 HGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE 567

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
               M+ L  + G LD +  +   M  +  I+
Sbjct: 568 HYGCMVDLLGRAGLLDEAHELIKSMPMRPNIA 599



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 200/438 (45%), Gaps = 45/438 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL--KA 90
           RSG   +AL L   +H   ++KP    + +     A L +   G  +HAY +R G   K+
Sbjct: 202 RSGLLDEALDLLRDMHVM-RVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKS 260

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              +   ++ +Y    +L   +RVF  +    + SWT  ++A     +++    +F KM 
Sbjct: 261 GVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKM- 319

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
                                +G G+F          +  +  S++  C  AG LE G+ 
Sbjct: 320 ---------------------LGEGMF---------PNEITMLSLVKECGTAGALELGKL 349

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH+   ++GF+  + +  A I MY  CG+V  A  VF+  K    D + ++ M+   A  
Sbjct: 350 LHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSK--DLMMWSAMISSYAQN 407

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
             ++EA   F  M    +RP+E T VS++  C       +G  +H+   K G +    + 
Sbjct: 408 NCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILK 467

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + + MY++CG ID A  +FA   ++DI  WN MIS +A    G +A+  + EM+++G+ 
Sbjct: 468 TSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527

Query: 387 PDEFTF-GSLLA--SSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P++ TF G+L A   SG + E   + H  V   G    ++    ++    +   + +A++
Sbjct: 528 PNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHE 587

Query: 443 IFHNMSPR-NIITWNTLI 459
           +  +M  R NI  + + +
Sbjct: 588 LIKSMPMRPNIAVFGSFL 605



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 156/365 (42%), Gaps = 71/365 (19%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
            + + LFV++     + P+  ++ + +  C        G  LHA+ LR G      +A  
Sbjct: 310 NEGVRLFVKM-LGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATA 368

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
            + +Y    D+ S + VF   ++ D+  W+  +S+  +   +D A ++F  M        
Sbjct: 369 FIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHM-------- 420

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTK 216
               TGC                    +R +  +  S+L +C  AG LE G+ +HS + K
Sbjct: 421 ----TGC-------------------GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDK 457

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G    + +  + + MY NCG++  A ++F EA     D   +N M+ G A  G  E AL
Sbjct: 458 QGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR--DISMWNAMISGFAMHGHGEAAL 515

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
             F +M    + P+++TF+  + AC         H+  ++ G   +  +    +  +   
Sbjct: 516 ELFEEMEALGVTPNDITFIGALHAC--------SHSGLLQEGKRLFHKM----VHEFGFT 563

Query: 337 GKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFG 393
            K++   CM+       D+              LGR+ +L  A+  ++S+ +RP+   FG
Sbjct: 564 PKVEHYGCMV-------DL--------------LGRAGLLDEAHELIKSMPMRPNIAVFG 602

Query: 394 SLLAS 398
           S LA+
Sbjct: 603 SFLAA 607



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/291 (21%), Positives = 118/291 (40%), Gaps = 71/291 (24%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
           +S  SK+L++  +  +++ +++    +A  +FV + +   ++P+  ++ + L  CA   +
Sbjct: 387 DSFKSKDLMM-WSAMISSYAQNNCIDEAFDIFVHM-TGCGIRPNERTMVSLLMICAKAGS 444

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
              G  +H+Y  + G+K    +  + + +Y N  D+ +  R+F+E  + D+  W   +S 
Sbjct: 445 LEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISG 504

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
               GH + A E                               LF EM  L V  ++ +F
Sbjct: 505 FAMHGHGEAALE-------------------------------LFEEMEALGVTPNDITF 533

Query: 193 ASVLSVCD-AGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
              L  C  +GLL+ G++L H +V + GF+  V                           
Sbjct: 534 IGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVE-------------------------- 567

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                   Y  M+D L   G ++EA    + M    +RP+   F S ++AC
Sbjct: 568 -------HYGCMVDLLGRAGLLDEAHELIKSM---PMRPNIAVFGSFLAAC 608


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 185/543 (34%), Positives = 294/543 (54%), Gaps = 41/543 (7%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VA 285
           NAL++   +   V D  ++F        D +SYN ++ G +S G    ++  +R +L   
Sbjct: 83  NALLSALAHSRLVPDMERLFASMPER--DAVSYNALITGFSSTGSPARSVQLYRALLREE 140

Query: 286 SLRPSELTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           S+RP+ +T    + V SA     +G+ VH Q ++ GF AY  V +  + MY+  G I +A
Sbjct: 141 SVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDA 200

Query: 343 CMIFARLQ-------------------------------EKDIVSWNTMISTYAQRNLGR 371
             +F  ++                               ++D ++W TM++   Q  L  
Sbjct: 201 RRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQL 260

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALI 428
            A+  +  M++ G+  D++TFGS+L + G +  +E    IHA++       N+ V +AL+
Sbjct: 261 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALV 320

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y+K   I+ A  +F  M+ RNII+W  +I G+  N    + ++ FSE+ M  ++PD++
Sbjct: 321 DMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDF 380

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL   +SSCA ++SL  G Q H   L + L+  +++ NA++TLY KCG ++ + R+F+ M
Sbjct: 381 TLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEM 440

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D +SW AL++ YAQ G+ KE +  F+ M   G +KPD  TF  VLSACS AGLV+ G
Sbjct: 441 SFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANG-LKPDGVTFIGVLSACSRAGLVEKG 499

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
              FDSM  D+G +P +DH +CM+DL  R+G   EAE  I        +  W  L S+C 
Sbjct: 500 CDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCR 559

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
             GN+ +G+  A  LLE +   P+ YVLL +++AA G W E A++R  ++   V K+PGC
Sbjct: 560 LRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGC 619

Query: 729 SWI 731
           SWI
Sbjct: 620 SWI 622



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 256/555 (46%), Gaps = 40/555 (7%)

Query: 48  HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNAR 106
           H++H L     ++ ++ A             +H   L+  L+A P  + N +L+ Y  + 
Sbjct: 3   HAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSG 62

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
            L   +RVF E+ +P++++    LSA      V     +F  MP+RD   YNA+ITG + 
Sbjct: 63  RLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSS 122

Query: 167 NGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS 224
            G     + L+R + + + VR    + ++++ V  A      G  +H  V + GF     
Sbjct: 123 TGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAF 182

Query: 225 VVNALITMYFNCGNVVDA------------------------CKVFEEAKGYVC-----D 255
           V + L+ MY   G + DA                        CK+ E+AKG        D
Sbjct: 183 VGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRD 242

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            I++  M+ GL   G   EAL  FR M    +   + TF S+++AC        G Q+HA
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHA 302

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
              ++ +E    V +A + MYS C  I  A  +F R+  ++I+SW  MI  Y Q      
Sbjct: 303 YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEE 362

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           A+ A+ EMQ  GI+PD+FT GS+++S   +  +E     H    ++G++  I VSNAL++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   I+ A+++F  MS  + ++W  L+ G+   G   + +  F ++L + L+PD  T
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVT 482

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM 548
               LS+C+R   +  G      + K++ I  +      MI LY++ G    +      M
Sbjct: 483 FIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542

Query: 549 IE-KDTISWNALISA 562
               D   W  L+S+
Sbjct: 543 PHSPDAFGWATLLSS 557



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 225/453 (49%), Gaps = 15/453 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S +G    ++ L+  +     ++P   +LS  +   + L + A G+ +H   L
Sbjct: 114 NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL 173

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  AY  V + ++ +Y     +   +RVF E++   V  + T ++   +   ++ A  
Sbjct: 174 RLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +F  M DRD   +  M+TG T+NG +   + +FR M    V  D Y+F S+L+ C A   
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVM 262
           LE G+Q+H+ +T++ +   V V +AL+ MY  C ++  A  VF   +   C + IS+  M
Sbjct: 294 LEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVF---RRMTCRNIISWTAM 350

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G       EEA+  F +M +  ++P + T  SV+S+C        G Q H  A+ SG 
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 410

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
             Y +VSNA +T+Y  CG I++A  +F  +   D VSW  +++ YAQ    +  I  + +
Sbjct: 411 MRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEK 470

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M + G++PD  TF  +L++   +G +E   +   +    +GI+        +I  Y+++ 
Sbjct: 471 MLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSG 530

Query: 436 RIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
           R K+A +    M  SP +   W TL++   L G
Sbjct: 531 RFKEAEEFIKQMPHSP-DAFGWATLLSSCRLRG 562



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P  + L+  L++ A+   L   +++   +   NL ++    NA+++  A    +    R+
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSRLVPDMERL 101

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA---VLSACSH 601
           F  M E+D +S+NALI+ ++  G    +V  ++A+     ++P + T +A   V SA S 
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 602 AGLVDD-GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
             L      ++       Y F+      S ++D+  + G + +A RV   Q ++A++
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVG-----SPLVDMYAKMGLIRDARRVF--QEMEAKT 211


>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25970
 gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 701

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 200/622 (32%), Positives = 334/622 (53%), Gaps = 15/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+Y     L +  K G + YA  +FD+MP RD   +N MI+G T  G  +    LF  M 
Sbjct: 34  DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93

Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +     D YSF+ +L  +      + G Q+H LV K G+ C V V ++L+ MY  C  V 
Sbjct: 94  RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS 299
           DA + F+E      + +S+N ++ G   V  ++ A      M + A++     TF  +++
Sbjct: 154 DAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIV 355
               P    +  QVHA+ +K G +   ++ NA I+ Y+ CG + +A  +F  L   KD++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EMIHAFV 412
           SWN+MI+ +++  L  SA   +++MQ   +  D +T+  LL A SG    +  + +H  V
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331

Query: 413 FINGIITNIQVSNALISAYAK--NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
              G+      +NALIS Y +     ++ A  +F ++  +++I+WN++I GF   G    
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ FS L  SE++ D+Y  S  L SC+ +++L+ G+QIH    K+  +S   + +++I 
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451

Query: 531 LYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           +Y+KCG ++ + + F  +  K  T++WNA+I  YAQHG G+ ++  F  M +   +K D 
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN-QNVKLDH 510

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TFTA+L+ACSH GL+ +G  + + M   Y   P  +H +  +DLLGRAG +++A+ +I 
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S  +             C A G + +   +A  LLE E +    YV LS++Y+    WEE
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
            A++++++K  GV K PG SWI
Sbjct: 631 KASVKKMMKERGVKKVPGWSWI 652



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 149/608 (24%), Positives = 271/608 (44%), Gaps = 78/608 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +  G  +DA  LF  +  S     D YS S  L   A+++    G Q+H   +
Sbjct: 70  NTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +   +V ++++ +Y     +      F EI  P+  SW   ++   ++  +  A  
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +   M                             EM K  V  D  +FA +L++ D  + 
Sbjct: 189 LLGLM-----------------------------EM-KAAVTMDAGTFAPLLTLLDDPMF 218

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               +Q+H+ V K G    +++ NA+I+ Y +CG+V DA +VF+   G   D IS+N M+
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK-DLISWNSMI 277

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G +     E A   F  M    +     T+  ++SAC        G  +H   +K G E
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337

Query: 321 AYTSVSNAAITMYSS--CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
             TS +NA I+MY     G +++A  +F  L+ KD++SWN++I+ +AQ+ L   A+  + 
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397

Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            ++S  I+ D++ F +LL S      +++ + IHA    +G ++N  V ++LI  Y+K  
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457

Query: 436 RIKQAYQIFHNMSPRN-IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            I+ A + F  +S ++  + WN +I G+  +G     L  FS++    ++ D  T +  L
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517

Query: 495 SSCARISSLRHGKQI--------------------------HGYVLK-NNLISKMSLGNA 527
           ++C+    ++ G ++                           G V K   LI  M L   
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577

Query: 528 MITLYA------KCGDLDCSLRVFNMMIE---KDTISWNALISAYAQHGEGKEAVSCFKA 578
            + L         CG+++ + +V N ++E   +D  ++ +L   Y+   + +E  S  K 
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637

Query: 579 MQDVGRIK 586
           M++ G  K
Sbjct: 638 MKERGVKK 645



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 14/300 (4%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
            H  A+K G  +   VSN  +  Y   G +  A M+F  + ++D VSWNTMIS Y     
Sbjct: 22  THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
              A   +  M+  G   D ++F  LL   AS    ++ E +H  V   G   N+ V ++
Sbjct: 82  LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-----LLNGFPVQGLQHFSELLMS 481
           L+  YAK ER++ A++ F  +S  N ++WN LI GF     +   F + GL      + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME----MKA 197

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            +  D  T +  L+           KQ+H  VLK  L  ++++ NAMI+ YA CG +  +
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257

Query: 542 LRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            RVF+ +   KD ISWN++I+ +++H   + A   F  MQ    ++ D  T+T +LSACS
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACS 316



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 32/195 (16%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   ++ G  +DA+  F  + SS ++K D Y+ S  L +C++L     G Q+H
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCSDLATLQLGQQIH 431

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A A ++G  +   V ++++ +Y     + S ++ F +I +                 H  
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK----------------HST 475

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A              +NAMI G  ++G   + + LF +M   +V+ D+ +F ++L+ C 
Sbjct: 476 VA--------------WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521

Query: 201 -AGLLEFGRQLHSLV 214
             GL++ G +L +L+
Sbjct: 522 HTGLIQEGLELLNLM 536


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 203/685 (29%), Positives = 347/685 (50%), Gaps = 45/685 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+YS    L AC  LR+   G +LH   ++ G  +   + N ++S+Y     L + KR+F
Sbjct: 161 DLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLF 220

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
              Q                                 D  ++N++++  + +G     + 
Sbjct: 221 DASQEKG------------------------------DAVLWNSILSSYSTSGKSLETLQ 250

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LFREM       ++Y+  S L+ C+     + G+++H+ V KS  S  V V NALI MY 
Sbjct: 251 LFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYA 310

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG +++A ++         D +++N ++ G       +EAL  F DM+ A  +P E++ 
Sbjct: 311 RCGKMLEAGRILRLMNN--ADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSL 368

Query: 295 VSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
            SV++A    R+     G ++HA  +K G+++   V N  I MYS C         F  +
Sbjct: 369 TSVIAA--SGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMM 426

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVE 406
            EKD++SW T+I+ YA  +    A+  + ++    +  DE   GS+L +   ++   +V+
Sbjct: 427 HEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVK 486

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH  +   G+I  + + N L+  Y K   +  A ++F ++  +++++W ++I+   LNG
Sbjct: 487 EIHCHILRKGLIDTV-IQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNG 545

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + ++ F  +  + L  D   L   LS+ A +S+L+ G++IHGY+L+     + S+  
Sbjct: 546 NENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAV 605

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YA CGDL  +  VF+ +  K  + + ++I+AY  HG GK +V  F  M+    + 
Sbjct: 606 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRH-ENVS 664

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  +F A+L ACSHAGL+D+G R    M  +Y   P  +H  C++D+LGRA  + EA  
Sbjct: 665 PDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFE 724

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            +     +  ++ W AL +AC +H    +G I A  LLE E   P   VL+SN++A  G 
Sbjct: 725 FVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 784

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W +   +R  +K +G+ K PGCSWI
Sbjct: 785 WNDVEKVRAKMKASGMEKHPGCSWI 809



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 41/365 (11%)

Query: 37  YQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           Y++AL  F   I + HK  PD  SL++ +AA   L N   G +LHAY ++ G  +   V 
Sbjct: 346 YKEALQFFCDMIAAGHK--PDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVG 403

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT++ +Y        + R F  +   D+ SWTT ++     G+    C V          
Sbjct: 404 NTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIA-----GYALNDCHV---------- 448

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
                             + LFR++ K  +  D     S+L  C     +   +++H  +
Sbjct: 449 ----------------EALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHI 492

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            + G    V + N L+ +Y  C N+  A +VFE  KG   D +S+  M+   A  G   E
Sbjct: 493 LRKGLIDTV-IQNELVDVYGKCRNMGYASRVFESIKGK--DVVSWTSMISSSALNGNENE 549

Query: 275 ALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  FR M    L    +  + +    ++    + G ++H   ++ GF    S++ A + 
Sbjct: 550 AVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVD 609

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG +  A  +F R++ K ++ + +MI+ Y     G++++  + +M+   + PD  +
Sbjct: 610 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHIS 669

Query: 392 FGSLL 396
           F +LL
Sbjct: 670 FLALL 674



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 119/240 (49%), Gaps = 12/240 (5%)

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +NG  + I+    L+    K+  + Q  ++F  M  R    WN LI  ++ NG P   L 
Sbjct: 90  VNGNNSPIEAYAYLLELCGKSRALSQE-KVFDEMRDRTAFAWNALIGAYVSNGEPASALF 148

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            +  + +  +  D Y+  V L +C ++  +R G ++H  ++K    S   + NA++++YA
Sbjct: 149 IYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYA 208

Query: 534 KCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           K   L  + R+F+   EK D + WN+++S+Y+  G+  E +  F+ MQ  G   P   ++
Sbjct: 209 KTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTG---PASNSY 265

Query: 593 TAV--LSACSHAGLVDDGTRIFDSMVND-YGFIPAEDHL-SCMLDLLGRAGYLDEAERVI 648
           T V  L+AC        G  I  +++   + F   E ++ + ++ +  R G + EA R++
Sbjct: 266 TIVSALTACEGFSYAKLGKEIHAAVLKSTHSF---EVYVCNALIAMYARCGKMLEAGRIL 322



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 117/265 (44%), Gaps = 38/265 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF  + +  +++ D   L + L AC+ L++     ++H + LR GL     + N +
Sbjct: 449 EALQLFRDV-AKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTV-IQNEL 506

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + +Y   R++    RVF  I+  DV SWT+ +S+    G+ + A E+F +M +       
Sbjct: 507 VDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAE------- 559

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSG 218
              TG   +    + I           +                    GR++H  + + G
Sbjct: 560 ---TGLLADSVALLCILSAAASLSALKK--------------------GREIHGYLLRKG 596

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           F    S+  A++ MY  CG++  A  VF+  E KG     + Y  M++     G  + ++
Sbjct: 597 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL----LQYTSMINAYGMHGCGKASV 652

Query: 277 IRFRDMLVASLRPSELTFVSVMSAC 301
             F  M   ++ P  ++F++++ AC
Sbjct: 653 ELFNKMRHENVSPDHISFLALLYAC 677


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 218/695 (31%), Positives = 361/695 (51%), Gaps = 52/695 (7%)

Query: 53  LKPDIYSLSTTLAACANLRNA-AFGNQLHAYALRAGLK--AYPHVANTILSLYKNARDLV 109
            +PD  SLS+ L+AC+ L +  +FG  +H+ A++ G +  A   VAN++++ Y       
Sbjct: 260 FQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPE 319

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           + K+VF+   N ++ SW                               NAMI G  +N  
Sbjct: 320 AAKKVFASNLNRNLVSW-------------------------------NAMIKGLVQNER 348

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVVN 227
               + + R+M +L+ + D  +  +++S C D GLL  G  LH  V + G      S+ N
Sbjct: 349 VTEALAVLRQM-RLENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGN 407

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV-EEALIRFRDMLVAS 286
           +L+ +Y  C    +A  +F        D IS+N M+ G +  G + EEA + F+ +L   
Sbjct: 408 SLLDLYLKCDEPSNAGLLFMTMPRR--DLISWNTMISGYSRYGPLREEAQLMFKGLLSEG 465

Query: 287 LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY-TSVSNAAITMYSSCGKIDEA 342
              S  T ++V+ +C  P     G  +H+ ++K GF +   S  NA I MY SCG    A
Sbjct: 466 SSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAA 525

Query: 343 CMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSG 400
             +  R+    DI+SWNT+I    Q  L + A+  +  M  S+ I PD  T  S+L++ G
Sbjct: 526 FSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACG 585

Query: 401 FIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            + ++ +   IH  +  +   +N++V N+L++ Y +    + A  +F++M   N+ +WN 
Sbjct: 586 DLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNC 645

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I+GF  N    + LQ + +  M +  P+E ++   + +C ++   R GK IHG+V ++ 
Sbjct: 646 MISGFAQNNKGWRALQFYQK--MEDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSV 703

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L + + +  +++ +Y KCG LD ++RVF    EK    WN+LISA+  HG G +++  F 
Sbjct: 704 LHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFW 763

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M D G +K  ++TF A+LSACSH+GLVD+G + +  M   +G  PA +H  C++D+LGR
Sbjct: 764 KMHDSG-MKATKSTFIALLSACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGR 822

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
           AG L EA + + S   Q     W AL +AC++   L++G  IA  LL  E      YV  
Sbjct: 823 AGRLQEAHKFVESLPSQQTHGIWGALLNACSSRSELKMGESIAKHLLHLEPGNSGYYVTA 882

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
           +N+YA   +W   A +R +L+  G++K  G S +G
Sbjct: 883 ANLYAYKDMWSGVAQVRSVLQDKGLVKPHGRSTVG 917



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 276/569 (48%), Gaps = 35/569 (6%)

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           +W   +    K G    A  VF  MP RD   +N++I+G   NG  ++    FREM    
Sbjct: 200 AWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSI 259

Query: 185 VRRDNYSFASVLSVCDA--GLLEFGRQLHSLVTKSGF----SCLVSVVNALITMYFNCGN 238
            + D  S +SVLS C     L  FG  +HS   K G+    SC  SV N+L+T Y   G 
Sbjct: 260 FQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASC--SVANSLVTFYSEFGM 317

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
              A KVF  A     + +S+N M+ GL    RV EAL   R M + + +P   T V+++
Sbjct: 318 PEAAKKVF--ASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPDVATLVTIV 374

Query: 299 SACLCPRV---GYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           S C    +   G  +H   ++ G      S+ N+ + +Y  C +   A ++F  +  +D+
Sbjct: 375 SGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDL 434

Query: 355 VSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHA 410
           +SWNTMIS Y++   L   A L +  + S G      T  +++ S    E +   + +H+
Sbjct: 435 ISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHS 494

Query: 411 FVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFP 468
           F    G  ++ +   NALI  Y        A+ +   + P  +II+WNT+I G L N   
Sbjct: 495 FSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQNELH 554

Query: 469 VQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
              L+ F  +  S  + PD  T+   LS+C  ++ L  GK IH  +LK+   S + + N+
Sbjct: 555 KDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNS 614

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++T+Y + GD   +  VF  M + +  SWN +IS +AQ+ +G  A+  ++ M+D    +P
Sbjct: 615 LLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMED---FEP 671

Query: 588 DQATFTAVLSACSHAGLVDDGTRI----FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           ++ +   ++ AC+  G    G  I    F S++++  FI A      ++D+  + G LD 
Sbjct: 672 NEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISAS-----LVDMYCKCGRLDI 726

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGN 672
           A RV  +   ++ +  W +L SA   HG+
Sbjct: 727 AVRVFEASAEKSIA-GWNSLISAFGFHGH 754



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 232/491 (47%), Gaps = 51/491 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +  L ++    +AL +  Q+   ++  PD+ +L T ++ CA+    + G  LH
Sbjct: 333 LVSWNAMIKGLVQNERVTEALAVLRQMRLENQ--PDVATLVTIVSGCADQGLLSEGETLH 390

Query: 81  AYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            Y +R G L+  P + N++L LY    +  +   +F  +   D+ SW T +S  ++ G +
Sbjct: 391 GYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPL 450

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
               ++  K                          GL  E         + S A++L+V 
Sbjct: 451 REEAQLMFK--------------------------GLLSE-------GSSCSLATMLAVI 477

Query: 200 DA----GLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            +      L FG+ LHS   K GF S  VS VNALI MY +CG+ + A  + E     V 
Sbjct: 478 PSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIP-VS 536

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CPRVGYQV 310
           D IS+N ++ G       ++AL  FR M  + ++ P  +T VSV+SAC       +G  +
Sbjct: 537 DIISWNTVIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSI 596

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K  F +   V N+ +TMY   G    A ++F  + + ++ SWN MIS +AQ N G
Sbjct: 597 HCMILKHLFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKG 656

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  Y +M+     P+E +   ++ +    G     + IH  VF + +  N+ +S +L
Sbjct: 657 WRALQFYQKMED--FEPNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASL 714

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K  R+  A ++F   + ++I  WN+LI+ F  +G  ++ +  F ++  S ++  +
Sbjct: 715 VDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATK 774

Query: 488 YTLSVALSSCA 498
            T    LS+C+
Sbjct: 775 STFIALLSACS 785



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 130/256 (50%), Gaps = 12/256 (4%)

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL+  YAK    + A  +FH+M  R+  +WN++I+G + NG       +F E+  S  +
Sbjct: 202 NALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQ 261

Query: 485 PDEYTLSVALSSCARISSL-RHGKQIHGYVLKNNL--ISKMSLGNAMITLYAKCGDLDCS 541
           PDE +LS  LS+C+R+  L   G+ +H   +K      +  S+ N+++T Y++ G  + +
Sbjct: 262 PDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAA 321

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            +VF   + ++ +SWNA+I    Q+    EA++  + M+     +PD AT   ++S C+ 
Sbjct: 322 KKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN--QPDVATLVTIVSGCAD 379

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSD-- 658
            GL+ +G  +   ++   G +  E  + + +LDL  +    DE            R D  
Sbjct: 380 QGLLSEGETLHGYVIRK-GLLREEPSMGNSLLDLYLKC---DEPSNAGLLFMTMPRRDLI 435

Query: 659 NWWALFSACAAHGNLR 674
           +W  + S  + +G LR
Sbjct: 436 SWNTMISGYSRYGPLR 451



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 15/290 (5%)

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F      ++I WN  +     +         F  +       D  T+ V LS  +R  +L
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNL 178

Query: 504 RHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           R G ++HG   K+ L +  +   NA++ +YAKCG+   +  VF+ M  +DT SWN++IS 
Sbjct: 179 RRGMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISG 238

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
              +G   E  +C+         +PD+ + ++VLSACS    +DD     +S+ +    +
Sbjct: 239 SIFNGLA-EVSACYFREMSCSIFQPDEVSLSSVLSACSR---LDDLFSFGESVHSCAVKL 294

Query: 623 PAEDHLSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
             ED  SC     ++      G  + A++V  S ++     +W A+        N R+  
Sbjct: 295 GYEDTASCSVANSLVTFYSEFGMPEAAKKVFAS-NLNRNLVSWNAMIKGLVQ--NERVTE 351

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRTGVIKQ 725
            +A L   R +++P V  L++ +   A  GL  E   +   + R G++++
Sbjct: 352 ALAVLRQMRLENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLRE 401


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  334 bits (857), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 189/543 (34%), Positives = 290/543 (53%), Gaps = 42/543 (7%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF----RDM 282
           N L+  Y   G + +    FE+      D +++NV+++G +  G V  A+  +    RD 
Sbjct: 76  NNLLLAYSKAGLISEMESTFEKLPDR--DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS-------- 334
                R + +T + + S+     +G Q+H Q +K GFE+Y  V +  + MY+        
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193

Query: 335 -----------------------SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                                  +CG I++A  +F R  EKD VSW  MI   AQ  L +
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAK 252

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            AI  + EM+  G++ D++ FGS+L + G +  +   + IHA +       +I V +ALI
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K + +  A  +F  M  +N+++W  ++ G+   G   + ++ F ++  S + PD Y
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL  A+S+CA +SSL  G Q HG  + + LI  +++ N+++TLY KCGD+D S R+FN M
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +D +SW A++SAYAQ G   E +  F  M   G +KPD  T T V+SACS AGLV+ G
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKG 491

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            R F  M ++YG +P+  H SCM+DL  R+G L+EA R IN       +  W  L SAC 
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
             GNL +G+  A  L+E +   P+ Y LLS+IYA+ G W+  A +R  ++   V K+PG 
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611

Query: 729 SWI 731
           SWI
Sbjct: 612 SWI 614



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 262/548 (47%), Gaps = 41/548 (7%)

Query: 61  STTLAACANL--RNAA-FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           S  +  C  L  RN + +   +H   +RA       + N I+  Y   +     +RVF  
Sbjct: 7   SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDR 66

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           I  P+++SW   L A +K G +      F+K+PDRD   +N +I G + +G     +  +
Sbjct: 67  IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126

Query: 178 REMHK-LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             M +         +  ++L +  + G +  G+Q+H  V K GF   + V + L+ MY N
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186

Query: 236 CGNVVDACKVF------------------------EEA----KGYVCDHISYNVMMDGLA 267
            G + DA KVF                        E+A    +G   D +S+  M+ GLA
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
             G  +EA+  FR+M V  L+  +  F SV+ AC        G Q+HA  +++ F+ +  
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V +A I MY  C  +  A  +F R+++K++VSW  M+  Y Q      A+  +L+MQ  G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366

Query: 385 IRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I PD +T G  +++   +  +E     H     +G+I  + VSN+L++ Y K   I  + 
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F+ M+ R+ ++W  +++ +   G  V+ +Q F +++   L+PD  TL+  +S+C+R  
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486

Query: 502 SLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNAL 559
            +  G++    +     ++  +   + MI L+++ G L+ ++R  N M    D I W  L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546

Query: 560 ISAYAQHG 567
           +SA    G
Sbjct: 547 LSACRNKG 554



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 12/411 (2%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L T L   ++  + + G Q+H   ++ G ++Y  V + +L +Y N   +   K+VF  +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            + +   + + +      G ++ A ++F  M ++D   + AMI G  +NG     I  FR
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EM    ++ D Y F SVL  C   G +  G+Q+H+ + ++ F   + V +ALI MY  C 
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A  VF+  K    + +S+  M+ G    GR EEA+  F DM  + + P   T    
Sbjct: 320 CLHYAKTVFDRMKQK--NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +SAC        G Q H +A+ SG   Y +VSN+ +T+Y  CG ID++  +F  +  +D 
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           VSW  M+S YAQ       I  + +M   G++PD  T   ++++     +VE    +  +
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497

Query: 415 ----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
                GI+ +I   + +I  ++++ R+++A +  + M  P + I W TL++
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 46/379 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L+++G  ++A+  F ++     LK D Y   + L AC  L     G Q+HA  +R  
Sbjct: 242 IKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            + + +V + ++ +Y   + L                                YA  VFD
Sbjct: 301 FQDHIYVGSALIDMYCKCKCL-------------------------------HYAKTVFD 329

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           +M  +++  + AM+ G  + G  +  + +F +M +  +  D+Y+    +S C +   LE 
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G Q H     SG    V+V N+L+T+Y  CG++ D+ ++F E    V D +S+  M+   
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN--VRDAVSWTAMVSAY 447

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAY 322
           A  GR  E +  F  M+   L+P  +T   V+SA  C R G     Q + + M S +   
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA--CSRAGLVEKGQRYFKLMTSEYGIV 505

Query: 323 TSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            S+ + +  I ++S  G+++EA      +    D + W T++S  A RN G   I  +  
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS--ACRNKGNLEIGKWAA 563

Query: 380 MQSVGIRPDEFTFGSLLAS 398
              + + P      +LL+S
Sbjct: 564 ESLIELDPHHPAGYTLLSS 582



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 148/368 (40%), Gaps = 74/368 (20%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-- 462
           V+MIH  +          + N ++ AYA  +    A ++F  +   N+ +WN L+  +  
Sbjct: 25  VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84

Query: 463 ------------------------LLNGFPVQGLQHFSELLMSELRPD------EYTLSV 492
                                   L+ G+ + GL   +    + +  D        TL  
Sbjct: 85  AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK------------------ 534
            L   +    +  GKQIHG V+K    S + +G+ ++ +YA                   
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204

Query: 535 -------------CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
                        CG ++ +L++F  M EKD++SW A+I   AQ+G  KEA+ CF+ M+ 
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRA 638
            G +K DQ  F +VL AC   G +++G +I   ++        +DH+   S ++D+  + 
Sbjct: 264 QG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIR----TNFQDHIYVGSALIDMYCKC 318

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
             L  A+ V +    Q    +W A+       G       I  L ++R    P  Y L  
Sbjct: 319 KCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIF-LDMQRSGIDPDHYTLGQ 376

Query: 699 NIYAAAGL 706
            I A A +
Sbjct: 377 AISACANV 384



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)

Query: 491 SVALSSC----ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           SV +  C    AR  S R+ K IHG +++     +  L N ++  YA       + RVF+
Sbjct: 7   SVQIKQCIGLGARNQS-RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            + + +  SWN L+ AY++ G   E  S F+ + D      D  T+  ++   S +GLV 
Sbjct: 66  RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD-----RDGVTWNVLIEGYSLSGLVG 120

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
              + +++M+ D+        L  ML L    G++   +++
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 211/742 (28%), Positives = 353/742 (47%), Gaps = 112/742 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y++ + LF  +  +  ++PD +       AC+ L+N   G  ++ Y L  G +    V
Sbjct: 169 GDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
             +IL ++                                K G +D A   F+++  +D+
Sbjct: 228 KGSILDMF-------------------------------IKCGRMDIARRFFEEIEFKDV 256

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
            ++N M++G T  G     +    +M    V+ D  ++                      
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------- 294

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG---YVCDHISYNVMMDGLASVGR 271
                       NA+I+ Y   G   +A K F E  G   +  + +S+  ++ G    G 
Sbjct: 295 ------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGY 342

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSN 327
             EAL  FR M++  ++P+ +T  S +SAC      R G ++H   +K    ++   V N
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 402

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + +  Y+ C  ++ A   F  +++ D+VSWN M++ YA R     AI    EM+  GI P
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462

Query: 388 DEFTFGSL-----------------------------------LASSGFIEMVEM---IH 409
           D  T+  L                                   LA+ G +  +++   IH
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
            +V  N I  +  V +ALIS Y+  + ++ A  +F  +S R+++ WN++I+    +G  V
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L    E+ +S +  +  T+  AL +C+++++LR GK+IH ++++  L +   + N++I
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y +CG +  S R+F++M ++D +SWN +IS Y  HG G +AV+ F+  + +G +KP+ 
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMG-LKPNH 701

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TFT +LSACSH+GL+++G + F  M  +Y   PA +  +CM+DLL RAG  +E    I 
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
               +  +  W +L  AC  H N  L    A  L E E      YVL++NIY+AAG WE+
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA IR L+K  GV K PGCSWI
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWI 843



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 220/456 (48%), Gaps = 46/456 (10%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +AS+L  C     L  G Q+H+ +  +G      + + L+ +Y   G V DA ++F++  
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
               +  S+  +M+    +G  EE +  F  M+   +RP    F  V  AC      RVG
Sbjct: 152 ER--NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             V+   +  GFE  + V  + + M+  CG++D A   F  ++ KD+  WN M+S Y  +
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
              + A+    +M+  G++PD+ T+                                NA+
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTW--------------------------------NAI 297

Query: 428 ISAYAKNERIKQAYQIFHNMS-----PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           IS YA++ + ++A + F  M        N+++W  LI G   NG+  + L  F ++++  
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCS 541
           ++P+  T++ A+S+C  +S LRHG++IHGY +K   L S + +GN+++  YAKC  ++ +
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            R F M+ + D +SWNA+++ YA  G  +EA+     M+  G I+PD  T+  +++  + 
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-IEPDIITWNGLVTGFTQ 476

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            G        F  M +  G  P    +S  L   G+
Sbjct: 477 YGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQ 511



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 197/388 (50%), Gaps = 15/388 (3%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++G+  +AL +F ++     +KP+  ++++ ++AC NL     G ++H Y ++  
Sbjct: 334 IAGSEQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 88  -LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
            L +   V N+++  Y   R +   +R F  I+  D+ SW   L+     G  + A E+ 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 147 DKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            +M     + D+  +N ++TG T+ G     +  F+ MH + +  +  + +  L+ C   
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L+ G+++H  V ++       V +ALI+MY  C ++  AC VF E      D + +N 
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR--DVVVWNS 570

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++   A  GR   AL   R+M ++++  + +T VS + AC      R G ++H   ++ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    + N+ I MY  CG I ++  IF  + ++D+VSWN MIS Y     G  A+  + 
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIE 403
             +++G++P+  TF +LL++   SG IE
Sbjct: 691 XFRTMGLKPNHITFTNLLSACSHSGLIE 718



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 14/324 (4%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA + +NG+     + + L+  Y +   ++ A ++F  MS RN+ +W  ++  +   G 
Sbjct: 111 VHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD 170

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + ++ F  ++   +RPD +       +C+ + + R GK ++ Y+L         +  +
Sbjct: 171 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 230

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ ++ KCG +D + R F  +  KD   WN ++S Y   GE K+A+ C   M+  G +KP
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG-VKP 289

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           DQ T+ A++S  + +G  ++ ++ F  M     F P     + ++    + GY  EA  V
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRL---GRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
                ++    N   + SA +A  NL L   GR I G  ++ E+       L S++    
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE-------LDSDLLVGN 402

Query: 705 GLWEEAANIR--ELLKRT-GVIKQ 725
            L +  A  R  E+ +R  G+IKQ
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQ 426


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 198/604 (32%), Positives = 323/604 (53%), Gaps = 12/604 (1%)

Query: 123  VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
            VY  T  L    K+G V YA   FD MP RD+  +NA+I G + NGY+   + LF +M K
Sbjct: 477  VYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLK 536

Query: 183  LDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            L       +   +L  C    L F G+ +H    KSG      V NAL +MY  CG++  
Sbjct: 537  LGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEA 596

Query: 242  ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            A  +FEE        +S+N M+      G  +EA+  F+ M+ A +  S++T +S+ SA 
Sbjct: 597  AEYLFEEMMDKSV--VSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSAN 654

Query: 302  LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
              P     +H   +K G     SV  + I MY+  G  D A +++  L +K++VS   +I
Sbjct: 655  ANPE---SIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAII 711

Query: 362  STYAQR-NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
            ++YA+  NLG   + ++ +M  + ++PD     S+L   A    I +  + H +   +G+
Sbjct: 712  TSYAEAGNLGL-VMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGL 770

Query: 418  ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             T   V+N LIS Y+K   ++  + +F  M  + +I+WN++I+G +  G     ++ F +
Sbjct: 771  DTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQ 830

Query: 478  LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
            + M    PD  T++  LS C+++  L+ G+++H Y+L+N L  +  +G A+I +Y KCG 
Sbjct: 831  MKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGS 890

Query: 538  LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +  + RVF  + +    +WNA+IS Y+ +G   +A++C+  MQ+ G ++PD+ TF  VL+
Sbjct: 891  IVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQG-VEPDKITFLGVLA 949

Query: 598  ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
            AC+H GL+ +G R F  M   Y  +P   H +CM+ LL R G  +EA   I +   +  S
Sbjct: 950  ACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDS 1009

Query: 658  DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
              W A  SAC  H  ++LG  +A  L   +     +YVL+SN+YA  G W++ A +RE++
Sbjct: 1010 AVWGAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMM 1069

Query: 718  KRTG 721
            K  G
Sbjct: 1070 KDAG 1073



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 249/562 (44%), Gaps = 55/562 (9%)

Query: 21   LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLK----PDIYSLSTTLAACANLRNAAFG 76
            ++  N  +   SR+G+   AL LFVQ+     LK    P   +L   L +C  L     G
Sbjct: 508  VVSWNALICGYSRNGYDFSALELFVQM-----LKLGFCPRQTTLVGLLPSCGQLELVFQG 562

Query: 77   NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
              +H + +++GL   P V N + S+Y    DL + + +F E+ +  V SW T + A  + 
Sbjct: 563  KSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQN 622

Query: 137  GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            G  D A  VF +M                      IG G+              S  +++
Sbjct: 623  GFFDEAMFVFKRM----------------------IGAGV------------EVSQVTIM 648

Query: 197  SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            S+  A        +H    K G +   SVV +LI MY   G+   A  ++        + 
Sbjct: 649  SLPSANANP--ESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQK--NL 704

Query: 257  ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQ 313
            +S   ++   A  G +   +  F  M   +++P  +  +S++     P    +G+  H  
Sbjct: 705  VSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGY 764

Query: 314  AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            A+KSG + +  V+N  I+MYS    ++    +F+ + EK ++SWN++IS   Q      A
Sbjct: 765  AIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHA 824

Query: 374  ILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISA 430
            I  + +M+  G  PD  T  SLL+     G+++  E +H+++  N +     V  ALI  
Sbjct: 825  IELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHM 884

Query: 431  YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            Y K   I  A ++F ++    + TWN +I+G+   GF  + L  +SE+    + PD+ T 
Sbjct: 885  YTKCGSIVHAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITF 944

Query: 491  SVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMM 548
               L++C     +  G++    + K  +++  +     M+ L A+ G  + +L  + NM 
Sbjct: 945  LGVLAACTHGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNME 1004

Query: 549  IEKDTISWNALISAYAQHGEGK 570
             E D+  W A +SA   H E K
Sbjct: 1005 KEPDSAVWGAFLSACCIHQEVK 1026



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 148/291 (50%), Gaps = 10/291 (3%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+    +K G + +  VS A + +Y   G++  A   F  +  +D+VSWN +I  Y++  
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSN 425
              SA+  +++M  +G  P + T   LL S G +E+V   + IH F   +G+  + QV N
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKN 582

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL S YAK   ++ A  +F  M  +++++WNT+I  +  NGF  + +  F  ++ + +  
Sbjct: 583 ALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEV 642

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            + T+    S+ A   S      IH Y +K  L    S+  ++I +YA+ G  D +  ++
Sbjct: 643 SQVTIMSLPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
             + +K+ +S  A+I++YA+ G     +  F  M  +  +KPD     ++L
Sbjct: 697 WSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQL-NMKPDSVAMLSIL 746



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 12/222 (5%)

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           GI   + VS AL+  Y K  R+  A+  F  M  R++++WN LI G+  NG+    L+ F
Sbjct: 472 GIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELF 531

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++L     P + TL   L SC ++  +  GK IHG+ +K+ L     + NA+ ++YAKC
Sbjct: 532 VQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKC 591

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           GDL+ +  +F  M++K  +SWN +I AY Q+G   EA+  FK M   G ++  Q T  ++
Sbjct: 592 GDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAG-VEVSQVTIMSL 650

Query: 596 LSACSHA----------GLVDDGTRIFDSMVNDYGFIPAEDH 627
            SA ++           GL DD + +  S++  Y    + DH
Sbjct: 651 PSANANPESIHCYTIKVGLADDAS-VVTSLICMYARYGSTDH 691



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 117/289 (40%), Gaps = 68/289 (23%)

Query: 14   SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
            S   ++ L+  N  ++   ++G    A+ LF Q+   H   PD  ++++ L+ C+ L   
Sbjct: 798  SGMHEKPLISWNSVISGCVQAGRASHAIELFCQM-KMHGCNPDAITIASLLSGCSQLGYL 856

Query: 74   AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             FG +LH+Y LR  L+    V   ++ +Y     +V  +RVF  I  P + +W       
Sbjct: 857  QFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATW------- 909

Query: 134  TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                    NAMI+G +  G+E   +  + EM +  V  D  +F 
Sbjct: 910  ------------------------NAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFL 945

Query: 194  SVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             VL+ C   GL+  GR+   ++TK         V  ++    +C     AC         
Sbjct: 946  GVLAACTHGGLIHEGRRYFQIMTK---------VYDMVPTLQHC-----AC--------- 982

Query: 253  VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                     M+  LA VG  EEAL+  ++M      P    + + +SAC
Sbjct: 983  ---------MVGLLARVGLFEEALLFIKNM---EKEPDSAVWGAFLSAC 1019


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 215/686 (31%), Positives = 356/686 (51%), Gaps = 44/686 (6%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +P  + L   L ACA+  + A   +LH   +RA L +   VA  +++L            
Sbjct: 14  RPIRHHLLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIAL------------ 58

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                           L++      + YA +VFD M   +  V+N MI G +        
Sbjct: 59  ----------------LASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDA 102

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA--GL--LEFGRQLHSLVTKSGFSCLVSVVNAL 229
           + +FREM +  V  DNY+ A+V+S   A  GL     G  +H+LV + GF+  V V++ L
Sbjct: 103 LAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGL 162

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +  Y    +V +A KVFEE   Y  D +S+  M+   A  G  ++ L    +M    + P
Sbjct: 163 VNYYGAFRSVKEASKVFEEM--YERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIP 220

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +++T +S++SAC   +    G  V+ Q  K G EA   + NA I+MY+ CG + +A   F
Sbjct: 221 NKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAF 280

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             +  +   SWNT+I  + Q +  + A+  + EM   G+ PD  T  S+L   A  G + 
Sbjct: 281 QAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELR 340

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +H+++  NGI  +  ++N+LI+ YAK   +  A ++F  M+ +++++W  ++ G++
Sbjct: 341 KGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYV 400

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
                      F E+ ++E+   E  L   LS+C+++ +L  G++IH Y+ + N+   + 
Sbjct: 401 KGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLC 460

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           L +A++ +YAKCG +D +  +F  M  K T+SWNA+I   A +G GKEAV  F  M ++ 
Sbjct: 461 LESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQ 520

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             KPD  T  AVL AC+H G+VD+G R F  +++  G +P  +H  C++DLLGRAG LDE
Sbjct: 521 DPKPDGITLKAVLGACAHVGMVDEGLRYF-YLMSSLGVVPDTEHYGCIVDLLGRAGMLDE 579

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A   I    I+     W +L +AC  H  + LG++I   ++    +   V+VL+SN++A 
Sbjct: 580 AFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAE 639

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCS 729
              W++  ++R L+   G+ K PG S
Sbjct: 640 ESQWDDVEHVRGLMGSRGIEKTPGHS 665



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 254/541 (46%), Gaps = 46/541 (8%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACA---NLRNAAFGNQLHAYALRAGLKAYPHV 94
           +DAL +F ++     + PD Y+++  ++A A    L+  + G+ +HA   R G  +   V
Sbjct: 100 RDALAVFREMRR-RGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFV 158

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + +++ Y   R +    +VF E+   DV SWT+ +SAC + GH       +DK+     
Sbjct: 159 MSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGH-------WDKV----- 206

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                              + +  EM    +  +  +  S+LS C     ++ GR +++ 
Sbjct: 207 -------------------LKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQ 247

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K G    V + NALI+MY  CG + DA + F+          S+N ++DG       +
Sbjct: 248 VGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTK--SWNTLIDGFVQNHEHK 305

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           EAL  F +ML+  + P  +T VSV+SAC      R G  VH+    +G      ++N+ I
Sbjct: 306 EALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLI 365

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG +  A  +F  + +KD+VSW  M+  Y + +    A   + EM+   +   E 
Sbjct: 366 NMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEM 425

Query: 391 TFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
              SLL++    G ++    IH+++    +  ++ + +AL+  YAK   I  A +IF  M
Sbjct: 426 ALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHG 506
             +  ++WN +I G   NG+  + ++ F ++L + + +PD  TL   L +CA +  +  G
Sbjct: 486 QHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEG 545

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQ 565
            +    +    ++        ++ L  + G LD +   +  M IE + + W +L++A   
Sbjct: 546 LRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRV 605

Query: 566 H 566
           H
Sbjct: 606 H 606



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 156/352 (44%), Gaps = 59/352 (16%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +++AL +F ++   H + PD  +L + L+ACA L     G  +H+Y    G+     + N
Sbjct: 304 HKEALRIFEEM-LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTN 362

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +++++Y    D+ + +RVF  +   DV SWT                             
Sbjct: 363 SLINMYAKCGDMAAAERVFQTMTKKDVVSWTV---------------------------- 394

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
              M+ G  +     +   LF EM   +V     +  S+LS C   G L+ GR++HS + 
Sbjct: 395 ---MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIE 451

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           +   +  + + +AL+ MY  CG +  A ++F + +      +S+N M+ GLAS G  +EA
Sbjct: 452 EMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHK--QTLSWNAMIGGLASNGYGKEA 509

Query: 276 LIRFRDML-VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI---T 331
           +  F  ML +   +P  +T  +V+ AC         H   +  G   +  +S+  +   T
Sbjct: 510 VELFDQMLELQDPKPDGITLKAVLGAC--------AHVGMVDEGLRYFYLMSSLGVVPDT 561

Query: 332 MYSSC--------GKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGR 371
            +  C        G +DEA     ++  E + V W ++++    + + +LG+
Sbjct: 562 EHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGK 613


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 215/686 (31%), Positives = 356/686 (51%), Gaps = 44/686 (6%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +P  + L   L ACA+  + A   +LH   +RA L +   VA  +++L            
Sbjct: 14  RPIRHHLLAYLDACASRAHLA---ELHGRLVRAHLTSDSFVAGRLIAL------------ 58

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                           L++      + YA +VFD M   +  V+N MI G +        
Sbjct: 59  ----------------LASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDA 102

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA--GL--LEFGRQLHSLVTKSGFSCLVSVVNAL 229
           + +FREM +  V  DNY+ A+V+S   A  GL     G  +H+LV + GF+  V V++ L
Sbjct: 103 LAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGL 162

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +  Y    +V +A KVFEE   Y  D +S+  M+   A  G  ++ L    +M    + P
Sbjct: 163 VNYYGAFRSVEEASKVFEEM--YERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIP 220

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +++T +S++SAC   +    G  V+ Q  K G EA   + NA I+MY+ CG + +A   F
Sbjct: 221 NKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAF 280

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             +  +   SWNT+I  + Q +  + A+  + EM   G+ PD  T  S+L   A  G + 
Sbjct: 281 QAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELR 340

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +H+++  NGI  +  ++N+LI+ YAK   +  A ++F  M+ +++++W  ++ G++
Sbjct: 341 KGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYV 400

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
                      F E+ ++E+   E  L   LS+C+++ +L  G++IH Y+ + N+   + 
Sbjct: 401 KGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLC 460

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           L +A++ +YAKCG +D +  +F  M  K T+SWNA+I   A +G GKEAV  F  M ++ 
Sbjct: 461 LESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQ 520

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             KPD  T  AVL AC+H G+VD+G R F  +++  G +P  +H  C++DLLGRAG LDE
Sbjct: 521 DPKPDGITLKAVLGACAHVGMVDEGLRYF-YLMSSLGVVPDTEHYGCIVDLLGRAGMLDE 579

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A   I    I+     W +L +AC  H  + LG++I   ++    +   V+VL+SN++A 
Sbjct: 580 AFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAE 639

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCS 729
              W++  ++R L+   G+ K PG S
Sbjct: 640 ESQWDDVEHVRGLMGSRGIEKTPGHS 665



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 254/541 (46%), Gaps = 46/541 (8%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACA---NLRNAAFGNQLHAYALRAGLKAYPHV 94
           +DAL +F ++     + PD Y+++  ++A A    L+  + G+ +HA   R G  +   V
Sbjct: 100 RDALAVFREMRRR-GVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFV 158

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + +++ Y   R +    +VF E+   DV SWT+ +SAC + GH       +DK+     
Sbjct: 159 MSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGH-------WDKV----- 206

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                              + +  EM    +  +  +  S+LS C     ++ GR +++ 
Sbjct: 207 -------------------LKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQ 247

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K G    V + NALI+MY  CG + DA + F+          S+N ++DG       +
Sbjct: 248 VGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYTK--SWNTLIDGFVQNHEHK 305

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           EAL  F +ML+  + P  +T VSV+SAC      R G  VH+    +G      ++N+ I
Sbjct: 306 EALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLI 365

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG +  A  +F  + +KD+VSW  M+  Y + +    A   + EM+   +   E 
Sbjct: 366 NMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEM 425

Query: 391 TFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
              SLL++    G ++    IH+++    +  ++ + +AL+  YAK   I  A +IF  M
Sbjct: 426 ALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKM 485

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHG 506
             +  ++WN +I G   NG+  + ++ F ++L + + +PD  TL   L +CA +  +  G
Sbjct: 486 QHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEG 545

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQ 565
            +    +    ++        ++ L  + G LD +   +  M IE + + W +L++A   
Sbjct: 546 LRYFYLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRV 605

Query: 566 H 566
           H
Sbjct: 606 H 606



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/364 (23%), Positives = 160/364 (43%), Gaps = 59/364 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++  +++AL +F ++   H + PD  +L + L+ACA L     G  +H+Y  
Sbjct: 292 NTLIDGFVQNHEHKEALRIFEEM-LLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIK 350

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G+     + N+++++Y    D+ + +RVF  +   DV SWT                 
Sbjct: 351 DNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTV---------------- 394

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                          M+ G  +     +   LF EM   +V     +  S+LS C   G 
Sbjct: 395 ---------------MVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGA 439

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ GR++HS + +   +  + + +AL+ MY  CG +  A ++F + +      +S+N M+
Sbjct: 440 LDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHK--QTLSWNAMI 497

Query: 264 DGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
            GLAS G  +EA+  F  ML +   +P  +T  +V+ AC         H   +  G   +
Sbjct: 498 GGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGAC--------AHVGMVDEGLRYF 549

Query: 323 TSVSNAAI---TMYSSC--------GKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQR 367
             +S+  +   T +  C        G +DEA     ++  E + V W ++++    + + 
Sbjct: 550 YLMSSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRM 609

Query: 368 NLGR 371
           +LG+
Sbjct: 610 DLGK 613


>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  334 bits (857), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 229/681 (33%), Positives = 342/681 (50%), Gaps = 79/681 (11%)

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           KRVFS + + +  ++ + ++   K G V  A ++FDKM  R+L  +N MI G   N    
Sbjct: 37  KRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNN--- 93

Query: 172 IGIGLFREMHKL-DV--RRDNYSFASVLSV-CDAGLLEFGRQLHSLVT-KSGFSCLVSVV 226
               +  E HKL D+   RDN+S+A +++     G+LE  R+L  LV  K   +C     
Sbjct: 94  ----MVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACW---- 145

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM---- 282
           NA+I  Y   G   DA KVFE  K  V D +SYN M+ G    G++  A+  F  M    
Sbjct: 146 NAMIAGYAKKGRFDDAEKVFE--KMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERN 203

Query: 283 ------LVASL-----------------RPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
                 +VA                    P+ +++V+++  C   R G  V A+ +    
Sbjct: 204 VVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTML--CGFARHGKIVEARKLFDRM 261

Query: 320 EAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                VS NA I  Y    +IDEA  +F     KD VSW TMI+ Y +      A   Y 
Sbjct: 262 PCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYN 321

Query: 379 EMQSVGI---------------------------RPDEFTFGSLLASSGFIEMVEMIHAF 411
           +M    +                           + D   + S++A  G+ +   M  A 
Sbjct: 322 QMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIA--GYCQSGRMSEAL 379

Query: 412 -VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +F    + N    N +IS YA+   + +A +IF  M  RN+I+WN+LI GFL NG  + 
Sbjct: 380 NLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLD 439

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+    +     +PD+ T + +LSSCA +++L+ GKQ+H  +LK+  I+ + + NA+I 
Sbjct: 440 ALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIA 499

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG +  + +VF  +   D ISWN+LIS YA +G   EA   F+ M   G + PD+ 
Sbjct: 500 MYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTV-PDEV 558

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +LSACSHAGL + G  +F  M+  +   P  +H SC++DLLGR G L+EA  ++  
Sbjct: 559 TFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRG 618

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++A +  W +L +AC  H N+ LG+I A  LLE E    S Y+ LSN++A AG WE+ 
Sbjct: 619 MKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDV 678

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R L++     K PGCSWI
Sbjct: 679 ERLRVLMRERRAGKLPGCSWI 699



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 120/313 (38%), Gaps = 90/313 (28%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHN-------------------------------MS 448
           N+   N  I    K  +I +A ++F N                               MS
Sbjct: 16  NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMS 75

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            RN+++WNT+I G+L N    +  + F   LM+E   D ++ ++ ++   R   L   ++
Sbjct: 76  QRNLVSWNTMIAGYLHNNMVEEAHKLFD--LMAE--RDNFSWALMITCYTRKGMLEKARE 131

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +   V         +  NAMI  YAK G  D + +VF  M  KD +S+N++++ Y Q+G+
Sbjct: 132 LFELVPDK---LDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGK 188

Query: 569 GKEAVSCFKAMQ------------------DVGRI--------KPDQATFTAVLSACSHA 602
              A+  F+ M                   D+G           P+  ++  +L   +  
Sbjct: 189 MGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARH 248

Query: 603 GLVDDGTRIFDSM------------------------VNDYGFIPAEDHLS--CMLDLLG 636
           G + +  ++FD M                        V  +   P +D +S   M++   
Sbjct: 249 GKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYV 308

Query: 637 RAGYLDEAERVIN 649
           R G LDEA  V N
Sbjct: 309 RVGKLDEAREVYN 321


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 223/815 (27%), Positives = 392/815 (48%), Gaps = 97/815 (11%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           R+T  +      S + +    + +A  S++GHY++AL LF ++      +PD       L
Sbjct: 7   RVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQW-EGTRPDKVVFVIAL 65

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF--------- 115
            ACA       G Q+H+  + +GL +   ++N+++++Y   +D+   ++VF         
Sbjct: 66  DACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGMLLRDVV 125

Query: 116 --------------------------SEIQNPDVYSWTTFLSACTKM------------- 136
                                     +E   P+  ++ T +  C K+             
Sbjct: 126 SWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRI 185

Query: 137 ----------------------GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G  D    VF +M    + ++  MI GC++NG  + G+
Sbjct: 186 INEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGL 245

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            +FR+M    V+ +  ++ S++ VC +   ++ G  + + + +S F     +  +LI++Y
Sbjct: 246 LVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSLISLY 305

Query: 234 FNCGNVVDACKVFEEAKG-----YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
             CG       + + AKG     Y  D +++N M+   A  G   EA+   R M +    
Sbjct: 306 GQCG-------ILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFG 358

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACM 344
            +++T++SV+ AC        G ++HA+ +  G  +   +V N+ ITMY  CG+ + A  
Sbjct: 359 ANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMS 418

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE- 403
           +F  +  KD VSWN +I+     +  + A+  +  M+  G+R +EFT  SLL + G +E 
Sbjct: 419 VFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLED 478

Query: 404 --MVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
             +   IHA     G   N   V N++++ YA+   +  A + F ++  + ++ W+ ++ 
Sbjct: 479 LKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILA 538

Query: 461 GFLL--NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
            +    +G   +  + F E+    ++P E T   AL +CA +++L HG+ +H     +  
Sbjct: 539 AYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGF 598

Query: 519 I-SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + + + LGN +I +Y KCG    +  VF+ M EK  ISWN+LI AYA +G   EA+S  +
Sbjct: 599 VETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQ 658

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G   PD  T  ++L   SHAGL++ G   F S + D+G  P+   L C++DLL R
Sbjct: 659 EMLLQG-FDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLAR 717

Query: 638 AGYLDEAERVI-NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
            G+LD AE +I  S   QA +  W  L +AC ++G+ + G   A  + E E      +V+
Sbjct: 718 KGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVV 777

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L+N+YA+ G W +A+ IR++++R  V K+PGCSWI
Sbjct: 778 LANLYASVGRWSDASRIRKMMERMSVKKEPGCSWI 812



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 283/582 (48%), Gaps = 15/582 (2%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K   V  A  VFD +  +++  +  M+   ++NG+    + LF  M     R D   F  
Sbjct: 4   KCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVVFVI 63

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C A G L+ GRQ+HS V  SG +  + + N+L+ MY  C +V  A KVF+     +
Sbjct: 64  ALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGM--LL 121

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D +S+  M+   A  G   +AL     M    ++P+++TFV+++  C   R   +G ++
Sbjct: 122 RDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKI 181

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H + +  G E    + NA + MY SCG  D+   +F+R+ +  ++ W TMI+  +Q    
Sbjct: 182 HHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQY 241

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
              +L + +M   G++ +E T+ S++     ++ V   EMI A +  +   ++  ++ +L
Sbjct: 242 EEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATSL 301

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           IS Y +   + +A  +  +M  R+++ WN ++     NG   + +     + M     ++
Sbjct: 302 ISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANK 361

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFN 546
            T    L +CA + +L  G++IH  VL   L+ + +++GN++IT+Y KCG  + ++ VF 
Sbjct: 362 VTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFE 421

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  KD +SWNA+I+A   + + ++A+  F  M+  G ++ ++ T  ++L AC     + 
Sbjct: 422 AMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEG-LRSNEFTLLSLLEACGGLEDLK 480

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
              +I            +    + ++++  R G L +A++  +S  ++ +    W++  A
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDS--LEEKGLVAWSIILA 538

Query: 667 CAAHGNLRLGRIIAGLLLEREQD--KPSVYVLLSNIYAAAGL 706
             A      GR       E E +  KP     +S + A A +
Sbjct: 539 AYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAM 580



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 233/486 (47%), Gaps = 21/486 (4%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           MY  C  V DA  VF+   G    ++ S+ +MM   +  G   EAL  F  M     RP 
Sbjct: 1   MYGKCARVTDALMVFD---GISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPD 57

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           ++ FV  + AC        G Q+H+  + SG  +   +SN+ + MY  C  +  A  +F 
Sbjct: 58  KVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFD 117

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
            +  +D+VSW  M++ YAQ      A+     M + G++P++ TF +++     + ++++
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL 177

Query: 408 ---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              IH  +   G+  +  + NAL+  Y           +F  M   +++ W T+I G   
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQ 237

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NG   +GL  F ++ +  ++ +E T    +  C  + +++ G+ I   +L++   S   L
Sbjct: 238 NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLL 297

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             ++I+LY +CG LD +  +   M ++D ++WNA+++A AQ+G+  EA+   + M D+  
Sbjct: 298 ATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRM-DMEG 356

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDE 643
              ++ T+ +VL AC++   +  G  I  + V   G +  E  + + ++ + G+ G  + 
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIH-ARVLLCGLLQREVAVGNSVITMYGKCGQTEA 415

Query: 644 AERVINSQHIQARSDN--WWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNI 700
           A  V  +     R D+  W A+ +A   +   +    +  G  +E E  + + + LLS +
Sbjct: 416 AMSVFEA---MPRKDDVSWNAVINASVGNSKFQDALELFHG--MELEGLRSNEFTLLSLL 470

Query: 701 YAAAGL 706
            A  GL
Sbjct: 471 EACGGL 476


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 339/670 (50%), Gaps = 53/670 (7%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G +LHA ALR+G  A     NT+++ Y                            +AC  
Sbjct: 95  GLELHAAALRSGHLADVFAGNTLVAFY----------------------------AAC-- 124

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            GH   A  VFD+MP RD+  +N++++    N   D        M +  V  +  S  SV
Sbjct: 125 -GHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSV 183

Query: 196 LSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           +  C    + G   FG  +H LV K+G   +V++ NAL+ MY   G+V  + KVFE    
Sbjct: 184 VPACGVEQEGG---FGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPE 240

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY--- 308
              + +S+N  +    + G   + L  FR M      P  +T  S++ A +   +GY   
Sbjct: 241 R--NEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALV--ELGYFDL 296

Query: 309 --QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
             +VH  ++K   E    V+N+ + MY+  G +++AC +F +++ +++VSWN MI+   Q
Sbjct: 297 GREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQ 356

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQV 423
                 A    ++MQ  G  P+  T  +LL +      ++  + IHA+    G++ ++ +
Sbjct: 357 NGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFI 416

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           SNALI  YAK  +++ A  IF ++S ++ +++NTLI G+  + +  + L  F +L    +
Sbjct: 417 SNALIDMYAKCGQLRLAQSIF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGI 475

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
             D  +   AL++C  +SS + GK+IHG +++  L +   L N ++ LY K G LD + +
Sbjct: 476 EYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASK 535

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           +FN + EKD  SWN +I  Y  HG+   A   F  M+D G +  D  ++ AVLS CSH G
Sbjct: 536 IFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHG-VTYDHVSYIAVLSVCSHGG 594

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV+ G + F  M+      P + H +CM+DLLGR+G L E+  +I      A SD W AL
Sbjct: 595 LVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLTESVEIILDMPFHANSDVWGAL 653

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             AC  HGN+ L +  A  L E + +    Y +L N+YA AG W EA  IR L+K   V 
Sbjct: 654 LGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQ 713

Query: 724 KQPGCSWIGS 733
           K P  SW+ S
Sbjct: 714 KNPAYSWVQS 723



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 263/553 (47%), Gaps = 53/553 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           ++ SL + + AC   +   FG  +H   L+ GL +  ++ N ++ +Y             
Sbjct: 176 NVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMY------------- 222

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG--YEDIG 173
                              K GHV+ + +VF+ MP+R+   +N+ I GC  N   Y D+ 
Sbjct: 223 ------------------GKFGHVEASMKVFEGMPERNEVSWNSAI-GCFLNAGLYGDV- 262

Query: 174 IGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           + LFR M +      + + +S+L ++ + G  + GR++H    K      + V N+L+ M
Sbjct: 263 LALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDM 322

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y   G++  AC VFE+ +  V + +S+N M+  L   G   EA      M      P+ +
Sbjct: 323 YAKFGSLEKACAVFEKIE--VRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSI 380

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T V+++ AC      + G Q+HA ++++G      +SNA I MY+ CG++  A  IF  L
Sbjct: 381 TLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIF-DL 439

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGF--IEMVE 406
            EKD VS+NT+I  Y+Q      ++  + ++ SVGI  D  +F G+L A +     +  +
Sbjct: 440 SEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGK 499

Query: 407 MIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            IH  V +  +++N   ++N L+  Y K   +  A +IF+ +  +++ +WN +I G+ ++
Sbjct: 500 EIHG-VLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMH 558

Query: 466 GFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           G  +    H  +L+    +  D  +    LS C+    +  GK+   ++L  NL  +   
Sbjct: 559 G-QIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMH 617

Query: 525 GNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
              M+ L  + G L  S+  + +M    ++  W AL+ A   HG  + A     A   + 
Sbjct: 618 YACMVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQ---YAADHLF 674

Query: 584 RIKPDQATFTAVL 596
            +KP+ + + +VL
Sbjct: 675 ELKPEHSGYYSVL 687



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/501 (23%), Positives = 214/501 (42%), Gaps = 64/501 (12%)

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNA 328
           EAL+ +  ML + + P + TF   + A           G ++HA A++SG  A     N 
Sbjct: 57  EALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNT 116

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +  Y++CG   +A  +F  +  +D+VSWN+++S++    +   A  A L M   G+  +
Sbjct: 117 LVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVN 176

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             +  S++ + G  +       +H  V   G+ + + + NAL+  Y K   ++ + ++F 
Sbjct: 177 VASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFE 236

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  RN ++WN+ I  FL  G     L  F  +      P   TLS  L +   +     
Sbjct: 237 GMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDL 296

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G+++HGY +K  +   + + N+++ +YAK G L+ +  VF  +  ++ +SWNA+I+   Q
Sbjct: 297 GREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQ 356

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI----------FDSM 615
           +G   EA      MQ  G   P+  T   +L ACS    +  G +I          FD  
Sbjct: 357 NGAESEAFGLVIKMQKDGEC-PNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLF 415

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH---------IQARSDNWWAL--- 663
           +++            ++D+  + G L  A+ + +            I   S + W+    
Sbjct: 416 ISN-----------ALIDMYAKCGQLRLAQSIFDLSEKDDVSYNTLILGYSQSPWSFESL 464

Query: 664 ---------------------FSACAAHGNLRLGRIIAGLLLER-EQDKPSVYVLLSNIY 701
                                 +AC    + + G+ I G+L+ R   + P +   L  +Y
Sbjct: 465 NLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLY 524

Query: 702 AAAGLWEEAANIRELLKRTGV 722
              G+ + A+ I   +K   V
Sbjct: 525 TKGGMLDTASKIFNRIKEKDV 545



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 206/462 (44%), Gaps = 47/462 (10%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G Y D L LF  + S     P   +LS+ L A   L     G ++H Y+++  ++    
Sbjct: 256 AGLYGDVLALFRGM-SERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIF 314

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VAN+++ +Y     L     VF +I+  +V SW                           
Sbjct: 315 VANSLVDMYAKFGSLEKACAVFEKIEVRNVVSW--------------------------- 347

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHS 212
               NAMI    +NG E    GL  +M K     ++ +  ++L  C     L+ G+Q+H+
Sbjct: 348 ----NAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHA 403

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
              ++G    + + NALI MY  CG +  A  +F+ ++    D +SYN ++ G +     
Sbjct: 404 WSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLSEK---DDVSYNTLILGYSQSPWS 460

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAA 329
            E+L  F+ +    +    ++F+  ++AC      + G ++H   ++     +  ++N  
Sbjct: 461 FESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTL 520

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           + +Y+  G +D A  IF R++EKD+ SWN MI  Y       +A   +  M+  G+  D 
Sbjct: 521 LGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDH 580

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN----ALISAYAKNERIKQAYQIFH 445
            ++ ++L+      +VE    + F + +  N++        ++    ++ ++ ++ +I  
Sbjct: 581 VSYIAVLSVCSHGGLVERGKKY-FSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEIIL 639

Query: 446 NMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +M    N   W  L+    ++G  ++  Q+ ++ L  EL+P+
Sbjct: 640 DMPFHANSDVWGALLGACRIHG-NIELAQYAADHLF-ELKPE 679



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%)

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAF 411
           WN++    +  +L   A+L Y  M   G+ PD+ TF   L ++             +HA 
Sbjct: 42  WNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAA 101

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
              +G + ++   N L++ YA       A ++F  M  R++++WN+L++ FL N      
Sbjct: 102 ALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDA 161

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
            Q    ++ S +  +  +L   + +C        G  +HG VLK  L S ++LGNA++ +
Sbjct: 162 RQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDM 221

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y K G ++ S++VF  M E++ +SWN+ I  +   G   + ++ F+ M + G   P   T
Sbjct: 222 YGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERG-FMPGSIT 280

Query: 592 FTAVLSACSHAGLVDDGTRI 611
            +++L A    G  D G  +
Sbjct: 281 LSSLLPALVELGYFDLGREV 300



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 38/257 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           ++L+LF Q+ SS  ++ D  S    L AC NL +   G ++H   +R  L  +P +ANT+
Sbjct: 462 ESLNLFKQL-SSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTL 520

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR----DL 154
           L LY     L +  ++F+ I+  DV SW   +      G +D A  +FD M D     D 
Sbjct: 521 LGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDH 580

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             Y A+++ C+  G  + G   F  M   ++      +A ++                L+
Sbjct: 581 VSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMV---------------DLL 625

Query: 215 TKSGFSCLVSVVNALITMYFNC-----GNVVDACKVFE--EAKGYVCDHI---------S 258
            +SG   L   V  ++ M F+      G ++ AC++    E   Y  DH+          
Sbjct: 626 GRSG--QLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGY 683

Query: 259 YNVMMDGLASVGRVEEA 275
           Y+V+ +  A  GR  EA
Sbjct: 684 YSVLRNMYAEAGRWNEA 700



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/278 (21%), Positives = 125/278 (44%), Gaps = 36/278 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +ANL ++G   +A  L +++    +  P+  +L   L AC+ + +   G Q+HA+++
Sbjct: 348 NAMIANLVQNGAESEAFGLVIKMQKDGEC-PNSITLVNLLPACSRMASLKTGKQIHAWSI 406

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL     ++N ++ +Y                                K G +  A  
Sbjct: 407 RTGLMFDLFISNALIDMY-------------------------------AKCGQLRLAQS 435

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD + ++D   YN +I G +++ +    + LF+++  + +  D  SF   L+ C +   
Sbjct: 436 IFD-LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSS 494

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G+++H ++ +   S    + N L+ +Y   G +  A K+F   K    D  S+N M+
Sbjct: 495 FKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEK--DVASWNNMI 552

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            G    G+++ A   F  M    +    +++++V+S C
Sbjct: 553 MGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVC 590



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 100/208 (48%), Gaps = 8/208 (3%)

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT--LSVALSSCARISS 502
           H +  R+   WN+L         P + L  ++ +L S + PD+ T   ++  ++ A  + 
Sbjct: 32  HPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAH 91

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G ++H   L++  ++ +  GN ++  YA CG    + RVF+ M  +D +SWN+L+S+
Sbjct: 92  PAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSS 151

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD--SMVNDYG 620
           +  +    +A     +M   G +  + A+  +V+ AC   G+  +G        +V   G
Sbjct: 152 FLANKMFDDARQALLSMMRSG-VPVNVASLVSVVPAC---GVEQEGGFGLGVHGLVLKTG 207

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVI 648
                +  + ++D+ G+ G+++ + +V 
Sbjct: 208 LDSIVNLGNALVDMYGKFGHVEASMKVF 235


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 211/742 (28%), Positives = 353/742 (47%), Gaps = 112/742 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y++ + LF  +  +  ++PD +       AC+ L+N   G  ++ Y L  G +    V
Sbjct: 169 GDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 227

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
             +IL ++                                K G +D A   F+++  +D+
Sbjct: 228 KGSILDMF-------------------------------IKCGRMDIARRFFEEIEFKDV 256

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
            ++N M++G T  G     +    +M    V+ D  ++                      
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW---------------------- 294

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG---YVCDHISYNVMMDGLASVGR 271
                       NA+I+ Y   G   +A K F E  G   +  + +S+  ++ G    G 
Sbjct: 295 ------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGY 342

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSN 327
             EAL  FR M++  ++P+ +T  S +SAC      R G ++H   +K    ++   V N
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 402

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + +  Y+ C  ++ A   F  +++ D+VSWN M++ YA R     AI    EM+  GI P
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEP 462

Query: 388 DEFTFGSL-----------------------------------LASSGFIEMVEM---IH 409
           D  T+  L                                   LA+ G +  +++   IH
Sbjct: 463 DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIH 522

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
            +V  N I  +  V +ALIS Y+  + ++ A  +F  +S R+++ WN++I+    +G  V
Sbjct: 523 GYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L    E+ +S +  +  T+  AL +C+++++LR GK+IH ++++  L +   + N++I
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLI 642

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y +CG +  S R+F++M ++D +SWN +IS Y  HG G +AV+ F+  + +G +KP+ 
Sbjct: 643 DMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMG-LKPNH 701

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TFT +LSACSH+GL+++G + F  M  +Y   PA +  +CM+DLL RAG  +E    I 
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
               +  +  W +L  AC  H N  L    A  L E E      YVL++NIY+AAG WE+
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA IR L+K  GV K PGCSWI
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWI 843



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 220/456 (48%), Gaps = 46/456 (10%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +AS+L  C     L  G Q+H+ +  +G      + + L+ +Y   G V DA ++F++  
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
               +  S+  +M+    +G  EE +  F  M+   +RP    F  V  AC      RVG
Sbjct: 152 ER--NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             V+   +  GFE  + V  + + M+  CG++D A   F  ++ KD+  WN M+S Y  +
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
              + A+    +M+  G++PD+ T+                                NA+
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTW--------------------------------NAI 297

Query: 428 ISAYAKNERIKQAYQIFHNMS-----PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           IS YA++ + ++A + F  M        N+++W  LI G   NG+  + L  F ++++  
Sbjct: 298 ISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCS 541
           ++P+  T++ A+S+C  +S LRHG++IHGY +K   L S + +GN+++  YAKC  ++ +
Sbjct: 358 VKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 417

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            R F M+ + D +SWNA+++ YA  G  +EA+     M+  G I+PD  T+  +++  + 
Sbjct: 418 RRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQG-IEPDIITWNGLVTGFTQ 476

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            G        F  M +  G  P    +S  L   G+
Sbjct: 477 YGDGKAALEFFQRM-HSMGMDPNTTTISGALAACGQ 511



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 198/388 (51%), Gaps = 15/388 (3%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++G+  +AL +F ++     +KP+  ++++ ++AC NL     G ++H Y ++  
Sbjct: 334 IAGSEQNGYDFEALSVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE 392

Query: 88  -LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
            L +   V N+++  Y   R +   +R F  I+  D+ SW   L+     G  + A E+ 
Sbjct: 393 ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELL 452

Query: 147 DKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            +M     + D+  +N ++TG T+ G     +  F+ MH + +  +  + +  L+ C   
Sbjct: 453 SEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQV 512

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L+ G+++H  V ++       V +ALI+MY  C ++  AC VF E      D + +N 
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR--DVVVWNS 570

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++   A  GR   AL   R+M ++++  + +T VS + AC      R G ++H   ++ G
Sbjct: 571 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 630

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    + N+ I MY  CG I ++  IF  + ++D+VSWN MIS Y     G  A+  + 
Sbjct: 631 LDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ 690

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIE 403
           + +++G++P+  TF +LL++   SG IE
Sbjct: 691 QFRTMGLKPNHITFTNLLSACSHSGLIE 718



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 14/324 (4%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +HA + +NG+     + + L+  Y +   ++ A ++F  MS RN+ +W  ++  +   G 
Sbjct: 111 VHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGD 170

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + ++ F  ++   +RPD +       +C+ + + R GK ++ Y+L         +  +
Sbjct: 171 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 230

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ ++ KCG +D + R F  +  KD   WN ++S Y   GE K+A+ C   M+  G +KP
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSG-VKP 289

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           DQ T+ A++S  + +G  ++ ++ F  M     F P     + ++    + GY  EA  V
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRL---GRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
                ++    N   + SA +A  NL L   GR I G  ++ E+       L S++    
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEE-------LDSDLLVGN 402

Query: 705 GLWEEAANIR--ELLKRT-GVIKQ 725
            L +  A  R  E+ +R  G+IKQ
Sbjct: 403 SLVDYYAKCRSVEVARRKFGMIKQ 426


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 206/668 (30%), Positives = 336/668 (50%), Gaps = 42/668 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFL 130
           +A  G Q+HA A+  G  +   VAN ++++Y     +   +RVF+E  +  +  SW   +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           SA  K      A +VF +M      V++                          ++   +
Sbjct: 175 SAYVKNDQCGDAIQVFGEM------VWSG-------------------------IQPTEF 203

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     +E GRQ+H++V + G+   V   NAL+ MY   G V  A  +FE+ 
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
                D +S+N ++ G    G    A+     M  + L P+  T  S++ AC       +
Sbjct: 264 PD--SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDL 321

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K+  ++   +    + MY+    +D+A  +F  +  +D++  N +IS  + 
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQV 423
                 A+  + E++  G+  +  T  ++L S+  +E       +HA     G I +  V
Sbjct: 382 GGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI +Y K   +  A ++F   S  +II   ++I            ++ F E+L   L
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD + LS  L++CA +S+   GKQ+H +++K   +S    GNA++  YAKCG ++ +  
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F+ + E+  +SW+A+I   AQHG GK A+  F  M D G I P+  T T+VL AC+HAG
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG-INPNHITMTSVLCACNHAG 620

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+  R F+SM   +G    E+H SCM+DLLGRAG LD+A  ++NS   QA +  W AL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             A   H +  LG++ A  L   E +K   +VLL+N YA+AG+W E A +R+L+K + + 
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740

Query: 724 KQPGCSWI 731
           K+P  SWI
Sbjct: 741 KEPAMSWI 748



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 172/644 (26%), Positives = 295/644 (45%), Gaps = 50/644 (7%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  LHA  L++G  +     N ++S Y   R     +R F EI +P   SW++       
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSS------- 73

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                   ++T  + NG     I  F  M    V  + ++   V
Sbjct: 74  ------------------------LVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVV 109

Query: 196 LS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L  V DA L   G Q+H++   +GF   V V NAL+ MY   G + DA +VF EA     
Sbjct: 110 LKCVPDARL---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER- 165

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           + +S+N +M       +  +A+  F +M+ + ++P+E  F  V++AC   R    G QVH
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVH 225

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  ++ G++     +NA + MY   G++D A +IF ++ + D+VSWN +IS         
Sbjct: 226 AMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            AI   L+M+  G+ P+ FT  S+L   + +G  ++   IH F+      ++  +   L+
Sbjct: 286 RAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAKN  +  A ++F  M  R++I  N LI+G    G   + L  F EL    L  +  
Sbjct: 346 DMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRT 405

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL+  L S A + +    +Q+H   +K   I    + N +I  Y KC  L  + RVF   
Sbjct: 406 TLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEEC 465

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D I+  ++I+A +Q   G+ A+  F  M   G ++PD    +++L+AC+     + G
Sbjct: 466 SSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQG 524

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            ++   ++    F+      + ++    + G +++AE   +S   +    +W A+    A
Sbjct: 525 KQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV-SWSAMIGGLA 582

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
            HG+ +    + G +++ E   P+   + S + A   AGL +EA
Sbjct: 583 QHGHGKRALELFGRMVD-EGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 253/523 (48%), Gaps = 21/523 (4%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  LH+ + KSG   L S  N LI+ Y  C     A + F+E       H+S++ ++   
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPC--HVSWSSLVTAY 78

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
           ++ G    A+  F  M    +  +E     V+      R+G QVHA AM +GF +   V+
Sbjct: 79  SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVA 138

Query: 327 NAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           NA + MY   G +D+A  +F     E++ VSWN ++S Y + +    AI  + EM   GI
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P EF F  ++     S  IE    +HA V   G   ++  +NAL+  Y K  R+  A  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  M   ++++WN LI+G +LNG   + ++   ++  S L P+ +TLS  L +C+   +
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+QIHG+++K N  S   +G  ++ +YAK   LD + +VF+ M  +D I  NALIS 
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISG 378

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL-VDDGTRIFDSMVNDYGF 621
            +  G   EA+S F  ++  G +  ++ T  AVL   S A L     TR   ++    GF
Sbjct: 379 CSHGGRHDEALSLFYELRKEG-LGVNRTTLAAVLK--STASLEAASTTRQVHALAVKIGF 435

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
           I     ++ ++D   +   L +A RV      +  S +  A  S   A      G     
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDANRVFE----ECSSGDIIACTSMITALSQCDHGEGAIK 491

Query: 682 LLLE--REQDKPSVYVLLSNIYAAAGL--WEEAANIR-ELLKR 719
           L +E  R+  +P  +VL S + A A L  +E+   +   L+KR
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 240/541 (44%), Gaps = 47/541 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DA+ +F ++  S  ++P  +  S  + AC   RN   G Q+HA  +R G       AN +
Sbjct: 185 DAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANAL 243

Query: 99  LSLY-KNAR-DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           + +Y K  R D+ SV  +F ++ + DV SW   +S C   GH   A E+  +M       
Sbjct: 244 VDMYMKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK------ 295

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
           Y+ ++                          + ++ +S+L  C  AG  + GRQ+H  + 
Sbjct: 296 YSGLVP-------------------------NVFTLSSILKACSGAGAFDLGRQIHGFMI 330

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K+       +   L+ MY     + DA KVF+    +  D I  N ++ G +  GR +EA
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDEA 388

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F ++    L  +  T  +V+ +           QVHA A+K GF     V N  I  
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  C  + +A  +F      DI++  +MI+  +Q + G  AI  ++EM   G+ PD F  
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            SLL   AS    E  + +HA +     +++    NAL+  YAK   I+ A   F ++  
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R +++W+ +I G   +G   + L+ F  ++   + P+  T++  L +C     +   K+ 
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 510 HGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
              + +   I +     + MI L  + G LD ++ + N M  + +   W AL+ A   H 
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHK 688

Query: 568 E 568
           +
Sbjct: 689 D 689



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS+  H + A+ LF+++     L+PD + LS+ L ACA+L     G Q+HA+ ++    +
Sbjct: 480 LSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                N ++  Y     +   +  FS +    V SW+  +    + GH   A E+F +M 
Sbjct: 539 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 598

Query: 151 DRDL-PVYNAMIT---GCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
           D  + P +  M +    C   G  D     F   +EM  +D   ++YS
Sbjct: 599 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 206/668 (30%), Positives = 336/668 (50%), Gaps = 42/668 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFL 130
           +A  G Q+HA A+  G  +   VAN ++++Y     +   +RVF+E  +  +  SW   +
Sbjct: 115 DARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLM 174

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           SA  K      A +VF +M      V++                          ++   +
Sbjct: 175 SAYVKNDQCGDAIQVFGEM------VWSG-------------------------IQPTEF 203

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     +E GRQ+H++V + G+   V   NAL+ MY   G V  A  +FE+ 
Sbjct: 204 GFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKM 263

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
                D +S+N ++ G    G    A+     M  + L P+  T  S++ AC       +
Sbjct: 264 PD--SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDL 321

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K+  ++   +    + MY+    +D+A  +F  +  +D++  N +IS  + 
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSH 381

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQV 423
                 A+  + E++  G+  +  T  ++L S+  +E       +HA     G I +  V
Sbjct: 382 GGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHV 441

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI +Y K   +  A ++F   S  +II   ++I            ++ F E+L   L
Sbjct: 442 VNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGL 501

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD + LS  L++CA +S+   GKQ+H +++K   +S    GNA++  YAKCG ++ +  
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F+ + E+  +SW+A+I   AQHG GK A+  F  M D G I P+  T T+VL AC+HAG
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG-INPNHITMTSVLCACNHAG 620

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+  R F+SM   +G    E+H SCM+DLLGRAG LD+A  ++NS   QA +  W AL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGAL 680

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             A   H +  LG++ A  L   E +K   +VLL+N YA+AG+W E A +R+L+K + + 
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIK 740

Query: 724 KQPGCSWI 731
           K+P  SWI
Sbjct: 741 KEPAMSWI 748



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 279/575 (48%), Gaps = 17/575 (2%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
           VFD++PD     +++++T  + NG     I  F  M    V  + ++   VL  V DA L
Sbjct: 59  VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL 118

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G Q+H++   +GF   V V NAL+ MY   G + DA +VF EA     + +S+N +M
Sbjct: 119 ---GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSER-NAVSWNGLM 174

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
                  +  +A+  F +M+ + ++P+E  F  V++AC   R    G QVHA  ++ G++
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYD 234

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
                +NA + MY   G++D A +IF ++ + D+VSWN +IS          AI   L+M
Sbjct: 235 KDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+ P+ FT  S+L   + +G  ++   IH F+      ++  +   L+  YAKN  +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F  M  R++I  N LI+G    G   + L  F EL    L  +  TL+  L S 
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +    +Q+H   +K   I    + N +I  Y KC  L  + RVF      D I+  
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+A +Q   G+ A+  F  M   G ++PD    +++L+AC+     + G ++   ++ 
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK 533

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
              F+      + ++    + G +++AE   +S   +    +W A+    A HG+ +   
Sbjct: 534 RQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV-SWSAMIGGLAQHGHGKRAL 591

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
            + G +++ E   P+   + S + A   AGL +EA
Sbjct: 592 ELFGRMVD-EGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 253/522 (48%), Gaps = 19/522 (3%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  LH+ + KSG   L S  N LI+ Y  C     A +VF+E       H+S++ ++   
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPC--HVSWSSLVTAY 78

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
           ++ G    A+  F  M    +  +E     V+      R+G QVHA AM +GF +   V+
Sbjct: 79  SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVA 138

Query: 327 NAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           NA + MY   G +D+A  +F     E++ VSWN ++S Y + +    AI  + EM   GI
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P EF F  ++     S  IE    +HA V   G   ++  +NAL+  Y K  R+  A  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  M   ++++WN LI+G +LNG   + ++   ++  S L P+ +TLS  L +C+   +
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+QIHG+++K N  S   +G  ++ +YAK   LD + +VF+ M  +D I  NALIS 
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISG 378

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
            +  G   EA+S F  ++  G +  ++ T  AVL + +        TR   ++    GFI
Sbjct: 379 CSHGGRHDEALSLFYELRKEG-LGVNRTTLAAVLKSTASLEAAST-TRQVHALAVKIGFI 436

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
                ++ ++D   +   L +A RV      +  S +  A  S   A      G     L
Sbjct: 437 FDAHVVNGLIDSYWKCSCLSDANRVFE----ECSSGDIIACTSMITALSQCDHGEGAIKL 492

Query: 683 LLE--REQDKPSVYVLLSNIYAAAGL--WEEAANIR-ELLKR 719
            +E  R+  +P  +VL S + A A L  +E+   +   L+KR
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 240/541 (44%), Gaps = 47/541 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DA+ +F ++  S  ++P  +  S  + AC   RN   G Q+HA  +R G       AN +
Sbjct: 185 DAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANAL 243

Query: 99  LSLY-KNAR-DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           + +Y K  R D+ SV  +F ++ + DV SW   +S C   GH   A E+  +M       
Sbjct: 244 VDMYMKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMK------ 295

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
           Y+ ++                          + ++ +S+L  C  AG  + GRQ+H  + 
Sbjct: 296 YSGLVP-------------------------NVFTLSSILKACSGAGAFDLGRQIHGFMI 330

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K+       +   L+ MY     + DA KVF+    +  D I  N ++ G +  GR +EA
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWM--FHRDLILCNALISGCSHGGRHDEA 388

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F ++    L  +  T  +V+ +           QVHA A+K GF     V N  I  
Sbjct: 389 LSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDS 448

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  C  + +A  +F      DI++  +MI+  +Q + G  AI  ++EM   G+ PD F  
Sbjct: 449 YWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            SLL   AS    E  + +HA +     +++    NAL+  YAK   I+ A   F ++  
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R +++W+ +I G   +G   + L+ F  ++   + P+  T++  L +C     +   K+ 
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 510 HGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
              + +   I +     + MI L  + G LD ++ + N M  + +   W AL+ A   H 
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHK 688

Query: 568 E 568
           +
Sbjct: 689 D 689



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS+  H + A+ LF+++     L+PD + LS+ L ACA+L     G Q+HA+ ++    +
Sbjct: 480 LSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                N ++  Y     +   +  FS +    V SW+  +    + GH   A E+F +M 
Sbjct: 539 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 598

Query: 151 DRDL-PVYNAMIT---GCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
           D  + P +  M +    C   G  D     F   +EM  +D   ++YS
Sbjct: 599 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  333 bits (855), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/630 (31%), Positives = 339/630 (53%), Gaps = 14/630 (2%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R    ++ P+V      L    K G +  A ++FD+MP +++  + + ++G T NG  + 
Sbjct: 17  RPRRRVEPPEVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEA 76

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +  F +M    V  ++++F + L+ C     L  G Q+HSL  ++GF+    V ++L+ 
Sbjct: 77  AMAAFADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVE 136

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           +Y  CG++  A  VF+  +    D + Y  ++      G  E A+     ML   + P+E
Sbjct: 137 LYSRCGDLGAAKGVFDRMESP--DVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNE 194

Query: 292 LTFVSVMSACLCPRV-GYQVHAQAMKS-GFEAYTS-VSNAAITMYSSCGKIDEACMIFAR 348
            T  S++ +C CP V G QVHA  +K+ G  + +   S+A I  YS   + D A  +F  
Sbjct: 195 HTMASILGSC-CPFVLGEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNN 253

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMVEM 407
           L  K++V+W +M+  + +      A+  + +M S G+  P+EF F   L + G I +   
Sbjct: 254 LHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACGSIALGRQ 313

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+      + ++++VSNAL+S Y +   +++   +  ++   +I++W T I+    NGF
Sbjct: 314 LHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGF 373

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +   S L    L P++Y  S ALSSCA ++ L  G+Q H   LK     K+  GNA
Sbjct: 374 SEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNA 433

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I LY+KCG +  +   F++M  +D  SWN+LI  YAQHG+   A+  F  M+ +   +P
Sbjct: 434 LINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEP 493

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMV--NDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           D+++F  VL+AC+HAG+V++G  +F ++   + +G  P+  H +C++D++GR+G  D+A 
Sbjct: 494 DESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDAL 553

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE---QDKPSV-YVLLSNIY 701
           R++     +  +  W  L ++C  HGNL  G + A  L+E     +D+ S  YVL+S I+
Sbjct: 554 RLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIH 613

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  G W +A  +R  +   GV K+ GCSW+
Sbjct: 614 AMRGEWRDAYRVRRRMDEAGVRKEAGCSWV 643



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/587 (24%), Positives = 259/587 (44%), Gaps = 47/587 (8%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++ L+R+G  + A+  F  + +S  + P+ ++ +  LAACA+      G Q+H+ A+RA
Sbjct: 64  AVSGLTRNGRPEAAMAAFADMVAS-GVAPNDFAFNAALAACADASALRAGEQVHSLAVRA 122

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G      V ++++ LY    DL + K VF  +++PDV  +T+ +SA  + G  + A +  
Sbjct: 123 GFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVDT- 181

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF 206
                                           +M +  V  + ++ AS+L  C   +L  
Sbjct: 182 ------------------------------LHQMLRQGVEPNEHTMASILGSCCPFVL-- 209

Query: 207 GRQLHSLVTKSG--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           G Q+H+ + K+    S  +   +ALI  Y        A  VF     +  + +++  MM 
Sbjct: 210 GEQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNL--HCKNVVTWCSMMQ 267

Query: 265 GLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
                GR E+AL  F DM+    + P+E  F   + AC    +G Q+H+ A+K    +  
Sbjct: 268 LHIRDGRPEDALQVFDDMISEGVVEPNEFAFSIALGACGSIALGRQLHSSAIKRNLTSDL 327

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VSNA ++MY     + E   +   ++  DIVSW T IS   Q      AI     + S 
Sbjct: 328 RVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSR 387

Query: 384 GIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ P+++ F S L+S   + +++     H      G    I   NALI+ Y+K  +I  A
Sbjct: 388 GLMPNDYAFSSALSSCADLALLDQGRQFHCLALKLGCDLKICTGNALINLYSKCGQIAPA 447

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCAR 499
              F  M  R++ +WN+LI+G+  +G     LQ F E+  +    PDE +    L++C  
Sbjct: 448 KLAFDVMDHRDVTSWNSLIHGYAQHGDASMALQVFGEMRSIRGTEPDESSFLGVLAACNH 507

Query: 500 ISSLRHGKQIHGYVL---KNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTIS 555
              +  G  +   +    ++      S    ++ +  + G  D +LR V  M      + 
Sbjct: 508 AGMVNEGVALFRAIASHSQHGATPSPSHYACVVDMMGRSGRFDDALRLVEEMPFRPGALI 567

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           W  L+++   HG  +      + + ++     D+ + + VL +  HA
Sbjct: 568 WKTLLASCRLHGNLETGELAAERLMELSEGGEDRDSASYVLMSGIHA 614


>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
 gi|194688792|gb|ACF78480.1| unknown [Zea mays]
          Length = 706

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/719 (28%), Positives = 349/719 (48%), Gaps = 79/719 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A ++RSG   +AL ++ Q      L P  ++L++ L+AC  +     G + H  A+
Sbjct: 10  NTVIAAVARSGSPGEALEMY-QGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAV 68

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL  +  V N +L +Y                               TK G V  A  
Sbjct: 69  KVGLDGHQFVENGLLGMY-------------------------------TKCGSVADAVR 97

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD---- 200
           +FD MP  +   + AM+ G  + G  D  + LF  M +  +R D  + +SVL  C     
Sbjct: 98  LFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACA 157

Query: 201 -----AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
                A  ++  + +H+LV + GF     V N+L+ +Y     + +A KVFE        
Sbjct: 158 GDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSI- 216

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM 315
            +S+N+++ G   +G  E A+     M  +   P+E+T+ +++++C+  R          
Sbjct: 217 -VSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKAR---------- 265

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
                                  +  A  +F ++ +  + +WNT++S Y Q  L +  I 
Sbjct: 266 ----------------------DVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETID 303

Query: 376 AYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  MQ   ++PD  T   +L+S    G  E+ + +H+      +  ++ V++ LI  Y+
Sbjct: 304 LFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYS 363

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K  ++  A  IF+ M+ R+++ WN++I+G  ++    +      ++  + + P E + + 
Sbjct: 364 KCGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYAS 423

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            ++ CAR+SS+  G+Q+H  VLK+     + +G ++I +YAK G++D +   FN MI K+
Sbjct: 424 MINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKN 483

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ++WN +I  YAQ+G G++AV  F+ M    + KPD  TF AVL+ CSH+GLVD+    F
Sbjct: 484 LVAWNEMIHGYAQNGFGEKAVELFEYMLTT-KQKPDSVTFIAVLTGCSHSGLVDEAVTFF 542

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +SM ++YG  P  +H +C++D L RA    E E VI     +     W  L +AC  H N
Sbjct: 543 NSMESNYGITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHN 602

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LG   A  L   +   PS YVLLSNIYA  G   +A+ +R L+   GV+K  G SW+
Sbjct: 603 AELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWV 661



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 249/514 (48%), Gaps = 50/514 (9%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFG 207
           MPDR+   +N +I     +G     + +++ M +  +   N++ ASVLS C A   L+ G
Sbjct: 1   MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R+ H L  K G      V N L+ MY  CG+V DA ++F+       + +S+  MM GLA
Sbjct: 61  RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPS--PNEVSFTAMMGGLA 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--CP---------RVGYQVHAQAMK 316
             G V++AL  F  M    +R   +   SV+ AC   C          ++   +HA  ++
Sbjct: 119 QGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVR 178

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            GF +   V N+ + +Y+   K+DEA  +F  L    IVSWN +I+ Y Q      A+  
Sbjct: 179 KGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEV 238

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
              MQ  G  P+E T+ ++LAS                                  K   
Sbjct: 239 LEFMQESGFEPNEVTYSNMLASC--------------------------------IKARD 266

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A  +F  +   ++ TWNTL++G+       + +  F  +    ++PD  TL+V LSS
Sbjct: 267 VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSS 326

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C+R+ +   GKQ+H   ++  L + M + + +I +Y+KCG +  +L +FNMM E+D + W
Sbjct: 327 CSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVCW 386

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N++IS  A H   +EA    K M++ G   P ++++ ++++ C+    +  G ++   ++
Sbjct: 387 NSMISGLAIHSLSEEAFDFLKQMRENGMF-PTESSYASMINLCARLSSIPQGRQMHAQVL 445

Query: 617 NDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVIN 649
            D G+     ++ C ++D+  ++G +D+A    N
Sbjct: 446 KD-GY-DQNVYVGCSLIDMYAKSGNMDDARLFFN 477



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 106/211 (50%), Gaps = 8/211 (3%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RN ++WNT+I     +G P + L+ +  +L   L P  +TL+  LS+C  +++L  G
Sbjct: 1   MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           ++ HG  +K  L     + N ++ +Y KCG +  ++R+F+ M   + +S+ A++   AQ 
Sbjct: 61  RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT-------RIFDSMVNDY 619
           G   +A+  F  M   G I+ D    ++VL AC+ A   D          +   ++V   
Sbjct: 121 GAVDDALRLFARMSRTG-IRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRK 179

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           GF   +   + ++DL  +   +DEA +V  S
Sbjct: 180 GFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 210


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/611 (31%), Positives = 323/611 (52%), Gaps = 15/611 (2%)

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           A +K   +D AC +FD+M  R+   +  +I G  ENG    G   F EM    +  D ++
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173

Query: 192 FASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           ++ +L +C  GL  +E G  +H+ +   GF+    V  AL+ MY     + D+ KVF   
Sbjct: 174 YSGILQIC-IGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTM 232

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
                + +S+N M+ G  S     +A   F  M+   + P   TF+ V  A    R    
Sbjct: 233 TE--VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNK 290

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTY 364
             +V   A++ G ++ T V  A I M S CG + EA  IF    +  +    WN MIS Y
Sbjct: 291 AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGY 350

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITN- 420
            +      A+  + +M    I  D +T+ S+   +A+   + + + +HA    +G+  N 
Sbjct: 351 LRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNY 410

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + +SNA+ +AYAK   ++   ++F+ M  R++I+W +L+  +       + ++ FS +  
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             + P+++T S  L SCA +  L +G+Q+HG + K  L     + +A++ +YAKCG L  
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + +VFN +   DT+SW A+I+ +AQHG   +A+  F+ M  +G ++P+  TF  VL ACS
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG-VEPNAVTFLCVLFACS 589

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H GLV++G + F  M   YG +P  +H +C++DLL R G+L++A   I+   ++     W
Sbjct: 590 HGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVW 649

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
             L  AC  HGN+ LG + A  +L  + +  + YVLLSN Y  +G +++  ++R L+K  
Sbjct: 650 QTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQ 709

Query: 721 GVIKQPGCSWI 731
           GV K+PGCSWI
Sbjct: 710 GVKKEPGCSWI 720



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 255/555 (45%), Gaps = 52/555 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A L+ +G + D    F ++ S   + PD ++ S  L  C  L +   GN +HA  +  G
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQS-QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             ++  V+  +L++Y   +++    +VF+ +   +V SW                     
Sbjct: 202 FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW--------------------- 240

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                     NAMITG T N        LF  M    V  D  +F  V      G+L   
Sbjct: 241 ----------NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA--IGML--- 285

Query: 208 RQLHSLVTKSGFSCLVSVVN------ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           R ++     SG++  + V +      ALI M   CG++ +A  +F         +  +N 
Sbjct: 286 RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNA 345

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSG 318
           M+ G    G  E+AL  F  M    +     T+ SV   ++A  C  +G +VHA+A+KSG
Sbjct: 346 MISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSG 405

Query: 319 FEA-YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
            E  Y S+SNA    Y+ CG +++   +F R++++D++SW ++++ Y+Q +    AI  +
Sbjct: 406 LEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIF 465

Query: 378 LEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             M++ GI P++FTF S+L S      +E  + +H  +   G+  +  + +AL+  YAK 
Sbjct: 466 SNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKC 525

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +  A ++F+ +S  + ++W  +I G   +G     LQ F  ++   + P+  T    L
Sbjct: 526 GCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVL 585

Query: 495 SSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKD 552
            +C+    +  G Q    + K   L+ +M     ++ L ++ G L+ ++   + M +E +
Sbjct: 586 FACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPN 645

Query: 553 TISWNALISAYAQHG 567
            + W  L+ A   HG
Sbjct: 646 EMVWQTLLGACRVHG 660



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 12/267 (4%)

Query: 401 FIEMVEMIHAFVFINGIITN--IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           F++  + +H F+  +    +  + + N +  AY+K   I  A ++F  MS RN  +W  L
Sbjct: 83  FLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVL 142

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I G   NG  + G + F E+    + PD++  S  L  C  + S+  G  +H  ++    
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGF 202

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S   +  A++ +YAK  +++ S +VFN M E + +SWNA+I+ +  +    +A   F  
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR 262

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDL 634
           M   G + PD  TF  V  A    G++ D  +  +  V+ Y      D      + ++D+
Sbjct: 263 MMGEG-VTPDAQTFIGVAKA---IGMLRDVNKAKE--VSGYALELGVDSNTLVGTALIDM 316

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWW 661
             + G L EA  + NS  I  R +  W
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPW 343


>gi|242035425|ref|XP_002465107.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
 gi|241918961|gb|EER92105.1| hypothetical protein SORBIDRAFT_01g032140 [Sorghum bicolor]
          Length = 805

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 225/726 (30%), Positives = 370/726 (50%), Gaps = 50/726 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  + ++ R+G+ ++A+ L+  +    ++  D  +++  L +C  LRN   G  +H
Sbjct: 109 LAQWNSVIVDIFRAGYPEEAILLYRGL-KLRQIGLDEKTVTFGLKSCTELRNLLLGKGMH 167

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A +L+ GL     V ++++ LY     +   ++ F EI + D+ S+T+ ++         
Sbjct: 168 ADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITG-------- 219

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                           Y+  +   + N +E     +  +M + ++  +  +  S+L V  
Sbjct: 220 ----------------YSENMDSTSWNAFE-----IASDMSQSNLEVNRVTLVSLLQVAG 258

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           + G +  G+ +H   T+ G      V+  +L+ MY  CG    A       K  V    S
Sbjct: 259 NLGAIREGKSVHCYSTRRGIGVSDEVLGTSLVHMYMQCGAYQLASASL---KNLVQSVAS 315

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSAC--LCPRVGY--QVHAQ 313
           +N M+ GL   G+   A+  F  ML    + P  +T+ +++SAC  LC   GY   VHA 
Sbjct: 316 WNAMLAGLVRTGQSGNAIHHFSVMLHEHKVVPDSVTYANLISACAELCNS-GYAASVHAY 374

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++        ++ A I +Y  C +I  +  +F +L  KD+VS+NTMI  Y Q  +   A
Sbjct: 375 LIRRSIPLDVVLATALIEVYMKCTRIMSSKHLFDQLVVKDLVSYNTMIYGYLQNGMVNEA 434

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           I    EM +  + P+  T  SLLA+      F+     IH F   +G  +N+ ++N +I 
Sbjct: 435 IALLKEMVAECVAPNFVTILSLLAAIADHKDFVRG-RWIHGFSIRHGFFSNVDIANQIIR 493

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL--RPDE 487
            Y+   +I  A  IF ++  +N+I+W  ++ G L  G   + ++ F +LLM +   +PD 
Sbjct: 494 MYSGCGKITSARTIFASLEKKNLISWTVMMMGCLFCGHGGETVELF-QLLMQQHGNKPDS 552

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+  A+ + + +  L+  KQIH +V +  L       N++IT YAKCG LD S+ +F  
Sbjct: 553 VTVMTAIQAVSELGHLKGVKQIHCFVYRALLEKDTKTINSLITAYAKCGRLDLSVGLFLS 612

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  +D  SWN++ISAY  HG   + +  FK M++ G I PD  TF++VLSACSHAGL+ +
Sbjct: 613 LEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEE-GNINPDGLTFSSVLSACSHAGLIKE 671

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G  IF SM + Y  +P E+H  C++DLL RAG+L+E  ++I    +  +S    AL SAC
Sbjct: 672 GLHIFQSMTSIYSVLPQEEHYGCIVDLLSRAGHLEEGYKLIKLSTLNDKSSVLCALLSAC 731

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             +GN  LG++I+  LLE  Q  P  Y L+S ++A  G W ++ANIR   K  G  K PG
Sbjct: 732 RTYGNTMLGQVISNELLELGQQNPGTYALISEVFAQKGQWNKSANIRNRAKENGSRKLPG 791

Query: 728 CSWIGS 733
            S I S
Sbjct: 792 SSLIES 797



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 148/676 (21%), Positives = 283/676 (41%), Gaps = 71/676 (10%)

Query: 101 LYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           L++N  D+ S+K++ + +       DV   +  L     +G +      F    + DL  
Sbjct: 52  LFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFLNDDLAQ 111

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +N++I      GY +  I L+R +    +  D  +    L  C +   L  G+ +H+   
Sbjct: 112 WNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKGMHADSL 171

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV--GRVE 273
           K G +    V ++L+ +Y     + D+ K FEE      D +SY  M+ G +        
Sbjct: 172 KLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDK--DIVSYTSMITGYSENMDSTSW 229

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV-SNAA 329
            A     DM  ++L  + +T VS++         R G  VH  + + G      V   + 
Sbjct: 230 NAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVSDEVLGTSL 289

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPD 388
           + MY  CG    A      L +  + SWN M++   +     +AI  + + +    + PD
Sbjct: 290 VHMYMQCGAYQLASASLKNLVQ-SVASWNAMLAGLVRTGQSGNAIHHFSVMLHEHKVVPD 348

Query: 389 EFTFGSL------LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             T+ +L      L +SG+   V   HA++    I  ++ ++ ALI  Y K  RI  +  
Sbjct: 349 SVTYANLISACAELCNSGYAASV---HAYLIRRSIPLDVVLATALIEVYMKCTRIMSSKH 405

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +  ++++++NT+I G+L NG   + +    E++   + P+  T+   L++ A    
Sbjct: 406 LFDQLVVKDLVSYNTMIYGYLQNGMVNEAIALLKEMVAECVAPNFVTILSLLAAIADHKD 465

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+ IHG+ +++   S + + N +I +Y+ CG +  +  +F  + +K+ ISW  ++  
Sbjct: 466 FVRGRWIHGFSIRHGFFSNVDIANQIIRMYSGCGKITSARTIFASLEKKNLISWTVMMMG 525

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG---------------LVDD 607
               G G E V  F+ +      KPD  T    + A S  G               L++ 
Sbjct: 526 CLFCGHGGETVELFQLLMQQHGNKPDSVTVMTAIQAVSELGHLKGVKQIHCFVYRALLEK 585

Query: 608 GTRIFDSMVNDYG-----------FIPAE----DHLSCMLDLLGRAGYLD---EAERVIN 649
            T+  +S++  Y            F+  E    D  + M+   G  G+     E  +++ 
Sbjct: 586 DTKTINSLITAYAKCGRLDLSVGLFLSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLME 645

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
             +I      + ++ SAC+  G ++ G                ++  +++IY+     E 
Sbjct: 646 EGNINPDGLTFSSVLSACSHAGLIKEG--------------LHIFQSMTSIYSVLPQEEH 691

Query: 710 AANIRELLKRTGVIKQ 725
              I +LL R G +++
Sbjct: 692 YGCIVDLLSRAGHLEE 707



 Score = 92.8 bits (229), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/320 (21%), Positives = 144/320 (45%), Gaps = 21/320 (6%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           F  +   C   R   ++HA+ +  G      + +  +  Y+S G + +  + F      D
Sbjct: 49  FSLLFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGFLNDD 108

Query: 354 IVSWNTMISTYAQRNLGRSAILAY--LEMQSVGIRPDEFTFG--------SLLASSGFIE 403
           +  WN++I    +      AIL Y  L+++ +G+     TFG        +LL   G   
Sbjct: 109 LAQWNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGKG--- 165

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +HA     G+  +  V ++L+  Y+K  R+  + + F  +  ++I+++ ++I G+ 
Sbjct: 166 ----MHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYS 221

Query: 464 --LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-IS 520
             ++       +  S++  S L  +  TL   L     + ++R GK +H Y  +  + +S
Sbjct: 222 ENMDSTSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSTRRGIGVS 281

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              LG +++ +Y +CG    +      +++    SWNA+++   + G+   A+  F  M 
Sbjct: 282 DEVLGTSLVHMYMQCGAYQLASASLKNLVQ-SVASWNAMLAGLVRTGQSGNAIHHFSVML 340

Query: 581 DVGRIKPDQATFTAVLSACS 600
              ++ PD  T+  ++SAC+
Sbjct: 341 HEHKVVPDSVTYANLISACA 360



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/226 (20%), Positives = 114/226 (50%), Gaps = 5/226 (2%)

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           D+F+   L  +   +  ++ +HA V   G+  ++ + + ++  YA    + +    FH  
Sbjct: 47  DKFSL--LFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFHGF 104

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
              ++  WN++I      G+P + +  +  L + ++  DE T++  L SC  + +L  GK
Sbjct: 105 LNDDLAQWNSVIVDIFRAGYPEEAILLYRGLKLRQIGLDEKTVTFGLKSCTELRNLLLGK 164

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
            +H   LK  L     +G++++ LY+K   +  S + F  +++KD +S+ ++I+ Y+++ 
Sbjct: 165 GMHADSLKLGLNRDKFVGSSLVGLYSKLARMGDSQKAFEEILDKDIVSYTSMITGYSENM 224

Query: 568 EGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACSHAGLVDDGTRI 611
           +   + + F+   D+ +  ++ ++ T  ++L    + G + +G  +
Sbjct: 225 D-STSWNAFEIASDMSQSNLEVNRVTLVSLLQVAGNLGAIREGKSV 269


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 215/708 (30%), Positives = 361/708 (50%), Gaps = 50/708 (7%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  + A+ +F ++     ++ D  +    L ACA L + + G  +HA+ + +GL+    +
Sbjct: 107 GQAKRAIWMFHRMQQE-GVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN +L +Y +                                G V  A  +F++M +RDL
Sbjct: 166 ANLLLHIYGSC-------------------------------GCVASAMLLFERM-ERDL 193

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             +NA I    ++G  D+ + LF+ M    VR    +    LSVC    +   R +HS+V
Sbjct: 194 VSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVC--AKIRQARAIHSIV 251

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            +SG    + V  AL + Y   G++  A +VF+ A     D +S+N M+   A  G + E
Sbjct: 252 RESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAER--DVVSWNAMLGAYAQHGHMSE 309

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           A + F  ML   + PS++T V+  + C   R G  +HA A++ G +    + NA + MY+
Sbjct: 310 AALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYT 369

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG  +EA  +F  +   + VSWNTMI+  +Q+   + A+  +  MQ  G+ P   T+ +
Sbjct: 370 RCGSPEEARHLFEGIP-GNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLN 428

Query: 395 LL--ASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN- 446
           LL   +S   E   M     +H+ +   G  +   +  A++  YA    I +A   F   
Sbjct: 429 LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRG 488

Query: 447 -MSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            M  R ++++WN +I+    +G   + L  F  + +  + P++ T    L +CA  ++L 
Sbjct: 489 AMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALT 548

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAY 563
            G  +H ++  + + S + +  A+ ++Y +CG L+ +  +F  + +E+D + +NA+I+AY
Sbjct: 549 EGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAY 608

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           +Q+G   EA+  F  MQ  G  +PD+ +F +VLSACSH GL D+G  IF SM   YG  P
Sbjct: 609 SQNGLAGEALKLFWRMQQEGS-RPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAP 667

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
           +EDH +C +D+LGRAG+L +AE +I    ++     W  L  AC  + ++  GR+   ++
Sbjct: 668 SEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMV 727

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +    S YV+LSNI A AG W+EAA +R  ++  G+ KQ G SWI
Sbjct: 728 RELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWI 775



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 169/599 (28%), Positives = 278/599 (46%), Gaps = 47/599 (7%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L A  + R  + G ++HA  +  GL+    + N +L LY     L  V+ VFS ++  D 
Sbjct: 36  LRAAGDDRLLSQGRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRDE 93

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SWTT ++A T+ G    A                               I +F  M + 
Sbjct: 94  ASWTTIITAYTEHGQAKRA-------------------------------IWMFHRMQQE 122

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            VR D  +F +VL  C   G L  GR +H+ + +SG      + N L+ +Y +CG V  A
Sbjct: 123 GVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASA 182

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
             +FE  +    D +S+N  +   A  G ++ AL  F+ M +  +RP+ +T V  +S C 
Sbjct: 183 MLLFERMER---DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA 239

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R    +H+   +SG E    VS A  + Y+  G +D+A  +F R  E+D+VSWN M+ 
Sbjct: 240 KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLG 299

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQ 422
            YAQ      A L +  M   GI P + T  +       +    MIHA     G+  +I 
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIV 359

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           + NAL+  Y +    ++A  +F  + P N ++WNT+I G    G   + L+ F  + +  
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEG 418

Query: 483 LRPDEYT----LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           + P   T    L    S+     ++  G+++H  ++     S+ ++G A++ +YA CG +
Sbjct: 419 MAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAI 478

Query: 539 DCSLRVFN---MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           D +   F    M    D +SWNA+IS+ +QHG GK A+  F+ M D+  + P+Q T  AV
Sbjct: 479 DEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCVAV 537

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           L AC+ A  + +G  + D + +  G        + +  + GR G L+ A  +     ++
Sbjct: 538 LDACAGAAALTEGVIVHDHLRHS-GMESNVFVATALASMYGRCGSLESAREIFEKVAVE 595



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 163/659 (24%), Positives = 304/659 (46%), Gaps = 95/659 (14%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N ++A  ++SG    AL LF ++     ++P   +L  TL+ CA +R A     +H
Sbjct: 193 LVSWNAAIAANAQSGDLDMALELFQRMQLE-GVRPARITLVITLSVCAKIRQA---RAIH 248

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +    +GL+    V+  + S Y                                ++GH+D
Sbjct: 249 SIVRESGLEQTLVVSTALASAY-------------------------------ARLGHLD 277

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A EVFD+  +RD+  +NAM+    ++G+      LF  M    +     +  +  + C 
Sbjct: 278 QAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS 337

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +  L FGR +H+   + G    + + NAL+ MY  CG+  +A  +FE   G   + +S+N
Sbjct: 338 S--LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG---NAVSWN 392

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PR------VGYQVHAQ 313
            M+ G +  G+++ AL  F+ M +  + P   T+++++ A    P        G ++H++
Sbjct: 393 TMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSR 452

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEK-DIVSWNTMISTYAQRNLG 370
            +  G+ +  ++  A + MY+SCG IDEA   F R  ++++ D+VSWN +IS+ +Q   G
Sbjct: 453 IVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHG 512

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNAL 427
           + A+  +  M   G+ P++ T  ++L A +G   + E  ++H  +  +G+ +N+ V+ AL
Sbjct: 513 KRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATAL 572

Query: 428 ISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
            S Y +   ++ A +IF  ++  R+++ +N +I  +  NG   + L+ F  +     RPD
Sbjct: 573 ASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E +    LS+C+       G +I   + ++  I+           YA      C++ V  
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSE------DHYA------CAVDVLG 680

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
                    W A         + +E + C         +KP    +  +L AC     VD
Sbjct: 681 ------RAGWLA---------DAEELIRCMD-------VKPTVLVWKTLLGACRKYRDVD 718

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCML-DLLGRAGYLDEAERV---INSQHIQARSDNWW 661
            G R+ +SMV +    P ++    +L ++L  AG  DEA  V   + S+ ++ ++   W
Sbjct: 719 RG-RLANSMVRE--LDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSW 774



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 175/375 (46%), Gaps = 24/375 (6%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G ++HA+ +  G E    + N  + +Y  C  + +   +F+RL+ +D  SW T+I+ Y +
Sbjct: 48  GRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
               + AI  +  MQ  G+R D  TF ++L   A  G +     IHA++  +G+     +
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +N L+  Y     +  A  +F  M  R++++WN  I     +G     L+ F  + +  +
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGV 224

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
           RP   TL + LS CA+I   R  + IH  V ++ L   + +  A+ + YA+ G LD +  
Sbjct: 225 RPARITLVITLSVCAKI---RQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKE 281

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF+   E+D +SWNA++ AYAQHG   EA   F  M   G I P + T     + CS   
Sbjct: 282 VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG-IPPSKVTLVNASTGCS--- 337

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
                +  F  M++        D      + +LD+  R G  +EA  +     I   + +
Sbjct: 338 -----SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG--IPGNAVS 390

Query: 660 WWALFSACAAHGNLR 674
           W  + +  +  G ++
Sbjct: 391 WNTMIAGSSQKGQMK 405


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/681 (30%), Positives = 352/681 (51%), Gaps = 42/681 (6%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           L + L  C N ++      +H   L  GL++   +  +++++Y   +D  S + VF  I 
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 120 -NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              DVY W + +S  +K        +VF ++ +  + V                      
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICV---------------------- 103

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
                    D++++ +V+    A   EF GR +H++V KSG  C V V ++L+ MY    
Sbjct: 104 --------PDSFTYPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFN 155

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              D+ +VF+E      D  S+N ++      G  E+AL  F  M  +   P+ ++    
Sbjct: 156 LFEDSVQVFDEMPER--DVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVA 213

Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +SAC   LC   G ++H + +K  FE    V++A + MY  C  ++ A  +F +++ K +
Sbjct: 214 ISACSRLLCLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSL 273

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAF 411
           V+WN+MI  Y  R   +S +     M   G RP + T  S+L   + S  +   + +H +
Sbjct: 274 VAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGY 333

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V  + +  +I ++ +LI  Y K   +K A  +F       + +WN +I+G++  G   + 
Sbjct: 334 VIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKA 393

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           +  + +++   ++PD  T +  LS+C+++++L  GKQIH  + ++ L +   L +A++ +
Sbjct: 394 VDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDM 453

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y+KCG++  + R+FN + +KD +SW  +ISAY  HG+ +EA+  F  MQ  G +KPD  T
Sbjct: 454 YSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFG-VKPDGVT 512

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F AVLSAC HAGL+D+G + F  M + YG   + +  SC++D+LGRAG L EA  ++  +
Sbjct: 513 FLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQK 572

Query: 652 -HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +  ++    LF AC  H +  LG  IA LL+E+  D  S Y +L N+YA+   W+ A
Sbjct: 573 PETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAA 632

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R  +K  G+ K+PGCSWI
Sbjct: 633 KRVRLKMKEVGMRKKPGCSWI 653



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 226/489 (46%), Gaps = 40/489 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S++  + D L +F ++ +     PD ++    + A   L     G  +H   +
Sbjct: 74  NSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRMIHTVVV 133

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++G      VA++++ +Y          +VF E+   DV SW T +S+  + G  + A E
Sbjct: 134 KSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQRGDAEKALE 193

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           +F +                               M + D   ++ S    +S C   L 
Sbjct: 194 LFGR-------------------------------MERSDFEPNSVSITVAISACSRLLC 222

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+++H    K  F     V +AL+ MY  C  +  A +VF++ +      +++N M+
Sbjct: 223 LERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRK--SLVAWNSMI 280

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G  + G  +  +     M++   RPS+ T  S++ AC   R    G  VH   ++S  +
Sbjct: 281 RGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVD 340

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           A   ++ + I +Y  CG++  A  +F + Q+  + SWN MIS Y        A+  Y +M
Sbjct: 341 ADIYINCSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQM 400

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
            SVG++PD  TF S+L++   +  +E    IH  +  + + T+  + +AL+  Y+K   +
Sbjct: 401 VSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNV 460

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           K+A +IF+++  +++++W  +I+ +  +G P + L HF E+    ++PD  T    LS+C
Sbjct: 461 KEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSAC 520

Query: 498 ARISSLRHG 506
                +  G
Sbjct: 521 GHAGLIDEG 529



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 142/305 (46%), Gaps = 43/305 (14%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +P   +L++ L AC+  RN   G  +H Y +R+ + A  ++  +++ LY    ++   + 
Sbjct: 305 RPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAET 364

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VF + Q   V SW   +S    +G+   A +V+D+M                      + 
Sbjct: 365 VFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQM----------------------VS 402

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +G         V+ D  +F SVLS C     LE G+Q+H  +++S       +++AL+ M
Sbjct: 403 VG---------VQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDM 453

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  CGNV +A ++F        D +S+ VM+    S G+  EAL  F +M    ++P  +
Sbjct: 454 YSKCGNVKEASRIFNSIPKK--DVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGV 511

Query: 293 TFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           TF++V+SAC     +   V Y    ++ K G EA     +  I +    G++ EA   + 
Sbjct: 512 TFLAVLSACGHAGLIDEGVKYFSQMRS-KYGIEASIEQYSCLIDILGRAGRLLEA---YG 567

Query: 348 RLQEK 352
            LQ+K
Sbjct: 568 ILQQK 572



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 34/236 (14%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
            T K+++   N+ ++     G++  A+ ++ Q+ S   ++PDI + ++ L+ C+ L    
Sbjct: 368 KTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSV-GVQPDIVTFTSVLSTCSQLAALE 426

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G Q+H     + L+    + + +L +Y    ++    R+F+ I   DV SWT  +SA  
Sbjct: 427 KGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYG 486

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G    A   FD                               EM K  V+ D  +F +
Sbjct: 487 SHGQPREALYHFD-------------------------------EMQKFGVKPDGVTFLA 515

Query: 195 VLSVC-DAGLLEFGRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           VLS C  AGL++ G +  S + +K G    +   + LI +    G +++A  + ++
Sbjct: 516 VLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQ 571


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 188/534 (35%), Positives = 297/534 (55%), Gaps = 13/534 (2%)

Query: 207 GRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMD 264
           G+QLH+ +++ S       +   L   Y  CG +  A  +F+   G V  +   +N M+ 
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFD---GIVLKNSFLWNFMIR 134

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEA 321
           G AS G   ++L+ +R+ML    R    T+  V+ AC   L   +G +VH++ +  G E+
Sbjct: 135 GYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLES 194

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V N+ + MY+  G +  A M+F R+ E+D+ SWNTMIS YA+     +A L +  M 
Sbjct: 195 DIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMG 254

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIIT-NIQVSNALISAYAKNERI 437
             G+  D  T   LL++   ++ V+   +IH +   N I   N   +N+LI  Y     +
Sbjct: 255 KAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCM 314

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F  +  ++ ++WN++I G+  NG   + L+ F  + +    PD+ T    L +C
Sbjct: 315 VDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            +I++LR+G  IH Y++K    +   +G A++ +Y+KCG L CS RVF+ M +K  +SW+
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+++ Y  HG G+EA+S    M+    + PD   FT++LSACSHAGLV +G  IF  M  
Sbjct: 435 AMVAGYGLHGRGREAISILDGMK-ANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEK 493

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           +Y   PA  H SCM+DLLGRAG+LDEA  +I +  I+  SD W AL +A   H N++L  
Sbjct: 494 EYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAE 553

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           I A  + +      S Y+ LSNIYAA   W++   +R +++R G+ K PGCS+I
Sbjct: 554 ISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFI 607



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 213/448 (47%), Gaps = 15/448 (3%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           F + C  M   +    +FD +  ++  ++N MI G   NG     + L+REM     R D
Sbjct: 104 FYAGCGLMSQAEV---IFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRAD 160

Query: 189 NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           N+++  VL  C D  L+E GR++HS V   G    + V N+L+ MY   G++  A  VF+
Sbjct: 161 NFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFD 220

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CP 304
                  D  S+N M+ G A       A + F  M  A L     T + ++SAC      
Sbjct: 221 RMAER--DLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAV 278

Query: 305 RVGYQVHAQAMKSGFEAYTS-VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
           + G  +H  A+++    Y    +N+ I MY +C  + +A  +F R++ KD VSWN+MI  
Sbjct: 279 KEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILG 338

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN 420
           YA+      ++  +  M   G  PD+ TF ++L +   I  +     IH+++   G   N
Sbjct: 339 YARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN 398

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
             V  AL+  Y+K   +  + ++F  M  +++++W+ ++ G+ L+G   + +     +  
Sbjct: 399 TIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKA 458

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLD 539
           + + PD    +  LS+C+    +  GK+I   + K  N+   +S  + M+ L  + G LD
Sbjct: 459 NSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLD 518

Query: 540 CSLRVFNMMIEKDTIS-WNALISAYAQH 566
            +  +   M  K T   W AL++A   H
Sbjct: 519 EAYVIIRTMEIKPTSDIWAALLTASRLH 546



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 38/350 (10%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           + D ++    L AC +L     G ++H+  +  GL++  +V N++L++Y           
Sbjct: 158 RADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMY----------- 206

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                                K G +  A  VFD+M +RDL  +N MI+G  +N      
Sbjct: 207 --------------------AKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTA 246

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVS-VVNALIT 231
             +F  M K  +  D  +   +LS C D   ++ G+ +H    ++          N+LI 
Sbjct: 247 FLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIE 306

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY NC  +VDA ++FE  +    D +S+N M+ G A  G   E+L  FR M +    P +
Sbjct: 307 MYCNCNCMVDARRLFERVRWK--DTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364

Query: 292 LTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +TF++V+ AC      R G  +H+  +K GF+A T V  A + MYS CG +  +  +F  
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDE 424

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           + +K +VSW+ M++ Y     GR AI     M++  + PD   F S+L++
Sbjct: 425 MPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSA 474



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 41/211 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +R+G   ++L LF ++ +     PD  +    L AC  +    +G  +H+Y +
Sbjct: 333 NSMILGYARNGDAFESLRLFRRM-ALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLV 391

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  A   V   ++ +Y     L   +RVF E                           
Sbjct: 392 KKGFDANTIVGTALVDMYSKCGSLACSRRVFDE--------------------------- 424

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
               MPD+ L  ++AM+ G   +G     I +   M    V  DN  F S+LS C  AGL
Sbjct: 425 ----MPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGL 480

Query: 204 LEFGRQLHSLVTK--------SGFSCLVSVV 226
           +  G+++   + K        S +SC+V ++
Sbjct: 481 VVEGKEIFYKMEKEYNVKPALSHYSCMVDLL 511


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 219/686 (31%), Positives = 340/686 (49%), Gaps = 34/686 (4%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYP----HVANTILSLYKNARDLVSVKRVFSEIQNP- 121
           C  +R   F  Q    +++      P    H   T+L       D VS K +  +I    
Sbjct: 20  CNRIRQCGFSVQTAESSVQWSDSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKG 79

Query: 122 ---DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG--CTENGYEDIGIGL 176
              D+++    L+A  K G    A  +FD+MP+R+   Y  +  G  C +       +GL
Sbjct: 80  SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYACQDP------VGL 133

Query: 177 FREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           +  +H+     + + F S L +       E    LHS + K G+     V  ALI  Y  
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSV 193

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV----GRVEEALIRFRDMLVASLRPSE 291
           CG+V  A  VFE   G +C  I   V+  G+ S     G  E++L     M +    P+ 
Sbjct: 194 CGSVDSARSVFE---GILCKDI---VVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNN 247

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF + + A +          VH Q +K+ +E    V    + +Y+  G + +A  +F  
Sbjct: 248 YTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNE 307

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MV 405
           + + D+V W+ MI+ + Q      A+  ++ M+   + P+EFT  S+L      +   + 
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLG 367

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  V   G   ++ VSNALI  YAK E++  A ++F  +S +N+++WNT+I G+   
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   + L  F E L +++   E T S AL +CA ++S+  G Q+HG  +K N   ++++ 
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVS 487

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N++I +YAKCGD+  +  VFN M   D  SWNALIS Y+ HG G++A+  F  M+     
Sbjct: 488 NSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKG-SDC 546

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KP+  TF  VLS CS+AGL+D G   F+SM+ D+G  P  +H +CM+ L GR+G LD+A 
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAM 606

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I     +     W A+ SA     N    R  A  +L+      + YVLLSN+YA A 
Sbjct: 607 NLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAK 666

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W   A+IR+ +K  GV K+PG SWI
Sbjct: 667 QWANVASIRKSMKEKGVKKEPGLSWI 692



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 200/437 (45%), Gaps = 43/437 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            +G ++D+L L  ++       P+ Y+  T L A   L    F   +H   L+   +  P
Sbjct: 224 ENGCFEDSLQLLSRM-GMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDP 282

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   +L LY    D+    +VF+E+   DV  W+                         
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF------------------------ 318

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLH 211
                  MI    +NG+ +  + +F  M +  V  + ++ +S+L+ C  G     G QLH
Sbjct: 319 -------MIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            LV K GF   V V NALI +Y  C  +  A K+F E      + +S+N ++ G  ++G 
Sbjct: 372 GLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSK--NVVSWNTVIVGYENLGE 429

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
             +AL  FR+ L   +  +E+TF S + AC       +G QVH  A+K+      +VSN+
Sbjct: 430 GGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNS 489

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MY+ CG I  A  +F  ++  D+ SWN +IS Y+   LGR A+  +  M+    +P+
Sbjct: 490 LIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPN 549

Query: 389 EFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
             TF  +L   +++G I+   +   + +  +GI   ++    ++  + ++ ++ +A  + 
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLI 609

Query: 445 HNMS-PRNIITWNTLIN 460
             +    +++ W  +++
Sbjct: 610 EGIPYEPSVMIWRAMLS 626



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 153/346 (44%), Gaps = 50/346 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++G    A+ +F+++     + P+ ++LS+ L  CA  + +  G QLH   ++ G
Sbjct: 320 IARFCQNGFCNKAVDIFIRMREGFVV-PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V+N ++ +Y     + +  ++F+E+ + +V SW T +                 
Sbjct: 379 FDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIV---------------- 422

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIG-----LFREMHKLDVRRDNYSFASVLSVCDA- 201
                               GYE++G G     +FRE  +  V     +F+S L  C + 
Sbjct: 423 --------------------GYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASL 462

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             +E G Q+H L  K+  +  V+V N+LI MY  CG++  A  VF E +    D  S+N 
Sbjct: 463 ASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEME--TIDVASWNA 520

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKS 317
           ++ G ++ G   +AL  F  M  +  +P+ LTF+ V+S C    L  +      +     
Sbjct: 521 LISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDH 580

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS 362
           G E         + ++   G++D+A  +   +  E  ++ W  M+S
Sbjct: 581 GIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS 626


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 212/625 (33%), Positives = 319/625 (51%), Gaps = 89/625 (14%)

Query: 188 DNYSFASVLSVC-------DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           D+  FA +L +C       DA      R +H  + ++ F   V + N LI +Y  CG + 
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDA------RSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLD 76

Query: 241 DACKVFEEAK-----------------GYV------------CDHISYNVMMDGLASVGR 271
            A KVF+                    G+V             D  S+N M+ G A   R
Sbjct: 77  YARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDR 136

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            EEAL  F  M       ++ +F S +SAC      ++G Q+H    KS +     + + 
Sbjct: 137 FEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSG 196

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I  YS CG +  A  +F  ++EK++VSWN +I+ Y Q      A+ A+  M  +G +PD
Sbjct: 197 LIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPD 256

Query: 389 EFTFGSLLAS----SGFIEMVEMIHAFV-----FINGII--------------------- 418
           E T  S++++    + F E V+ IHA V     F N +I                     
Sbjct: 257 EVTLASVVSACATLAAFKEGVQ-IHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315

Query: 419 -TNIQVSNA-----LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              + V NA     ++S YAK+  +K A  +F  +  ++I++WN LI G+  NG   + L
Sbjct: 316 FDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEAL 375

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGN 526
             F  L    + P  YT    L++ A ++ L  G+Q H +V+K+           + +GN
Sbjct: 376 GLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGN 435

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +Y KCG ++  LRVF  M+EKD +SWN +I  YAQ+G G EA+  F+ M + G  K
Sbjct: 436 SLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGE-K 494

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  T    L ACSHAGLV++G R F SM  ++G +P +DH +CM+DLLGRAG L+EA+ 
Sbjct: 495 PDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKD 554

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I S   Q  +  W +L SAC  H N+ LG+ +A  + E +      YVLL+N+Y+  G 
Sbjct: 555 LIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGR 614

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W +A ++R+L++R GV+KQPGCSWI
Sbjct: 615 WGDAVSVRKLMRRRGVVKQPGCSWI 639



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 154/560 (27%), Positives = 270/560 (48%), Gaps = 53/560 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D    +  L  C  LR++     +H   ++        + N ++ +Y     L   ++VF
Sbjct: 23  DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             +   +V+S+ + +S   + G VD +  +F  MP++D   +N+MI G  ++   +  + 
Sbjct: 83  DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            F  MH+ D   ++YSF S LS C     L+ G Q+H L++KS +S  V + + LI  Y 
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202

Query: 235 NCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            CG V  A +VF+  E K  V    S+N ++      G   EAL  F  M     +P E+
Sbjct: 203 KCGLVGCARRVFDGMEEKNVV----SWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEV 258

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEA-CM--- 344
           T  SV+SAC      + G Q+HA+ +KS  F     + NA + MY+ CG+++EA C+   
Sbjct: 259 TLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDR 318

Query: 345 ---------------------------IFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
                                      +FA +++KDIVSWN +I+ Y Q      A+  +
Sbjct: 319 MPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLF 378

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAFVFINGIITNIQVSNALI 428
             ++   + P  +TFG+LL +S  +  +E+          H F F +G   +I V N+LI
Sbjct: 379 RMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLI 438

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K   +++  ++F NM  ++ ++WNT+I G+  NG+ ++ L+ F ++L S  +PD  
Sbjct: 439 DMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHV 498

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T+   L +C+    +  G++    + K + L+        M+ L  + G L+ +  +   
Sbjct: 499 TMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIES 558

Query: 548 MIEK-DTISWNALISAYAQH 566
           M ++ D + W++L+SA   H
Sbjct: 559 MPKQPDAVVWSSLLSACKVH 578



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 215/482 (44%), Gaps = 79/482 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++   +++AL  FV++H    +  D YS  + L+AC+ L++   G Q+H    
Sbjct: 125 NSMIAGFAQHDRFEEALDWFVRMHRDDFVLND-YSFGSGLSACSRLKDLKLGAQIH---- 179

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL     ++ +  SL                    DV+  +  +   +K G V  A  
Sbjct: 180 --GL-----ISKSKYSL--------------------DVFMGSGLIDFYSKCGLVGCARR 212

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD M ++++  +N +IT   +NG     +  F  M +L  + D  + ASV+S C A L 
Sbjct: 213 VFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSAC-ATLA 271

Query: 205 EF--GRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEE------------A 249
            F  G Q+H+ V KS  F   + + NAL+ MY  CG V +A  VF+              
Sbjct: 272 AFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMV 331

Query: 250 KGYVC-----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            GY                   D +S+N ++ G    G  EEAL  FR +   S+ P+  
Sbjct: 332 SGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHY 391

Query: 293 TFVSVM--SACLCP-RVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDEAC 343
           TF +++  SA L    +G Q H+  +K GF      E    V N+ I MY  CG ++E  
Sbjct: 392 TFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGL 451

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F  + EKD VSWNTMI  YAQ   G  A+  + +M   G +PD  T    L +     
Sbjct: 452 RVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAG 511

Query: 404 MVEMIHAFVFI----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTL 458
           +VE    + F     +G++        ++    +   +++A  +  +M  + + + W++L
Sbjct: 512 LVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSL 571

Query: 459 IN 460
           ++
Sbjct: 572 LS 573


>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 745

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 205/711 (28%), Positives = 353/711 (49%), Gaps = 81/711 (11%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+  +      C   R+      LH++ +++G   +  + N ++S+Y     ++  + +F
Sbjct: 2   DLNHIQIAFRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMF 61

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            E+ + ++ SWTT +S  T              MP   L +YN MI    E         
Sbjct: 62  DEMPHRNIVSWTTMVSVLTN-----------SSMPHEALSLYNEMIESKIE--------- 101

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLL---EFGRQLHSLVTKSGFSCLVSVVNALITM 232
                     + + + +++VL  C  GL+   E G+ +H  + ++     + ++NAL+ M
Sbjct: 102 ----------QPNQFLYSAVLKAC--GLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDM 149

Query: 233 YFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDGLASVGRVEEAL--------------- 276
           Y  CG++ DA +VF E     C +  S+N ++ G A  G +++A+               
Sbjct: 150 YVKCGSLRDAQRVFCEIP---CKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWN 206

Query: 277 --------------IRFRDMLVAS-LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
                         +RF  M+    L+  E TF SV+ AC C     +G ++H   +KSG
Sbjct: 207 SIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSG 266

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS-----WNTMISTYAQRNLGRSA 373
           FE+     +A I MYSSC  + EA  IF +      VS     WN+M+S +        A
Sbjct: 267 FESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEA 326

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +     M   G+R D +TF  +L    +   + +   +H FV  +G   +  V + LI  
Sbjct: 327 LSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDI 386

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   I  A ++F  +  ++++ W++LI G    G        F +++   L+ D + +
Sbjct: 387 YAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVI 446

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S+ L +C+ ++S +HGKQ+H   LK    S+  +  A+I +YAKCGD++ +L +F  + E
Sbjct: 447 SIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSE 506

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            DT+SW ++I   AQ+G  +EA+S    M + G  KP++ T   VL+AC H+GLV++   
Sbjct: 507 IDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGT-KPNKITILGVLTACRHSGLVEEAWD 565

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           +F+S+  ++G IP  +H +CM+D+LG+AG  +EA ++I+    +     W +L  AC  +
Sbjct: 566 VFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTY 625

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            N  L  I+A  LL    +  SVY++LSN+YAA G+W+  + +RE +K+ G
Sbjct: 626 KNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKIG 676



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/544 (26%), Positives = 264/544 (48%), Gaps = 13/544 (2%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ S    +AL L+ ++  S   +P+ +  S  L AC  +RN   G  +H +  +A L  
Sbjct: 79  LTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDV 138

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              + N +L +Y     L   +RVF EI   +  SW T +    K G +D A ++FDKMP
Sbjct: 139 DIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP 198

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ 209
           + D+  +N++I G  +N      +     MH   ++ D ++F SVL  C  +  L  GR+
Sbjct: 199 EPDIVSWNSIIAGLVDNASSR-ALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGRE 257

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHIS-YNVMMDGL 266
           +H  + KSGF      ++ALI MY +C  + +A K+F++      V + ++ +N M+ G 
Sbjct: 258 IHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGH 317

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
              G   EAL     M  + +R    TF  V+  C+      +  QVH   + SG+E   
Sbjct: 318 VVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDC 377

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +  I +Y+  G I+ A  +F RL +KD+V+W+++I+  A+    + A   +++M  +
Sbjct: 378 VVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHL 437

Query: 384 GIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G++ D F    +L +   +   +  + +H+     G  +   V+ ALI  YAK   I+ A
Sbjct: 438 GLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDA 497

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  +S  + ++W ++I G   NG   + +    +++ S  +P++ T+   L++C   
Sbjct: 498 LSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHS 557

Query: 501 SSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNA 558
             +     +   +  N+ LI      N M+ +  + G  + ++++ + M  + D   W++
Sbjct: 558 GLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSS 617

Query: 559 LISA 562
           L+ A
Sbjct: 618 LLGA 621



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 127/556 (22%), Positives = 240/556 (43%), Gaps = 66/556 (11%)

Query: 44  FVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK 103
           FV +     LK D ++  + L AC        G ++H Y +++G ++  +  + ++ +Y 
Sbjct: 223 FVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYS 282

Query: 104 NARDLVSVKRVFSE-IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT 162
           + + L    ++F +  +N  V                              L ++N+M++
Sbjct: 283 SCKLLSEATKIFDQYFRNSSV---------------------------SESLALWNSMLS 315

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSC 221
           G   NG     + +   MH+  VR D Y+F+ VL +C +   L    Q+H  V  SG+  
Sbjct: 316 GHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYEL 375

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
              V + LI +Y   G++ +A ++FE       D ++++ ++ G A  G  + A   F D
Sbjct: 376 DCVVGSILIDIYAKQGSINNALRLFERLPDK--DVVAWSSLITGCARFGSDKLAFSLFMD 433

Query: 282 MLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M+   L+        V+ AC      + G QVH+  +K G+E+   V+ A I MY+ CG 
Sbjct: 434 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD 493

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           I++A  +F  L E D +SW ++I   AQ      AI    +M   G +P++ T   +L +
Sbjct: 494 IEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTA 553

Query: 399 ---SGFIEMV-EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNI 452
              SG +E   ++ ++    +G+I   +  N ++    +  R ++A ++   M   P   
Sbjct: 554 CRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKT 613

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS----------------- 495
           I W++L+       +  + L +     +    P++ ++ + LS                 
Sbjct: 614 I-WSSLLGA--CGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRE 670

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +  +I   R GK  +    K   +  + LG      +AK G     ++V   ++E D +S
Sbjct: 671 TVKKIGKKRAGKIFYEIPFKFYFMEHLHLG------HAKQGLNGGVVKVIYPILEPDLVS 724

Query: 556 WNALISAYAQHGEGKE 571
           WN +I+  A +    E
Sbjct: 725 WNNVIAGLADNASPYE 740


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/704 (29%), Positives = 350/704 (49%), Gaps = 42/704 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G++++AL LF  +  S +  P+ ++LST L +C+ LR    G +  A   ++G  + P +
Sbjct: 95  GNHEEALELFDSMLISGEY-PNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVL 153

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + ++  Y                               +K G    A  VF+ M + D+
Sbjct: 154 GSALIDFY-------------------------------SKCGCTQEAYRVFEYMNNGDI 182

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             +  M++   E G     + L+  M +  V  + ++F  +L+      L +G+ +H+ +
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGLNYGKLVHAHL 242

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
                   + +  AL+ MY  C ++ DA KV +    Y  D   +  ++ G     +  E
Sbjct: 243 MMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEY--DVFLWTAIISGFTQSLKFRE 300

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  F +M  + + P+  T+  +++AC   L   +G Q+H++ + +G E   SV N+ + 
Sbjct: 301 AITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVD 360

Query: 332 MYSSCGK-IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           MY  C   I++A   F  +   +++SW ++I+ +++  L   +I  +  MQ VG+RP+ F
Sbjct: 361 MYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSF 420

Query: 391 TFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  ++L + G I+       +H ++  N    ++ V NAL+ AYA    +  A+ +   M
Sbjct: 421 TLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMM 480

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             R++IT+ +L       G     L   + +   ++R D ++L+  LS+ A I  +  GK
Sbjct: 481 KHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGK 540

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+H Y +K+ L S +S+ N ++ LY KCG +  + R F  + E D +SWN LI   A +G
Sbjct: 541 QLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNG 600

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
               A+S F+ M+  G ++PDQ T   VL ACSH GLVD G   F SM   +G  P  DH
Sbjct: 601 HVSSALSAFEDMRLAG-VEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDH 659

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
             C++DLLGRAG L+EA  VI +   +  +  +  L  AC  HGN+ LG  +A   LE +
Sbjct: 660 YVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELD 719

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              P+ YVLL+N+Y  +G  E     R +++  GV K PG SW+
Sbjct: 720 PSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWM 763



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 182/705 (25%), Positives = 324/705 (45%), Gaps = 82/705 (11%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           YSL   + +  N R+   G  +H+  ++ G +    ++N +LSLY               
Sbjct: 16  YSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYG-------------- 61

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
                            K   V  A ++FD+MP RD+  +  +++   + G  +  + LF
Sbjct: 62  -----------------KCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELF 104

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             M       + ++ ++ L  C A L EF  G +  +LVTKSGF     + +ALI  Y  
Sbjct: 105 DSMLISGEYPNEFTLSTALRSCSA-LREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSK 163

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG   +A +VFE       D +S+ +M+      G   +AL  +  M+   + P+E TFV
Sbjct: 164 CGCTQEAYRVFEYMNN--GDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFV 221

Query: 296 SVMSAC--LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            +++A   L    G  VHA  M    E    +  A + MY  C  I++A  +     E D
Sbjct: 222 KLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYD 281

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHA 410
           +  W  +IS + Q    R AI A+ EM++ G+ P+ FT+  +L +   I   ++ + IH+
Sbjct: 282 VFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHS 341

Query: 411 FVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
            V + G+  ++ V N+L+  Y K +  I+ A + F  ++  N+I+W +LI GF  +G   
Sbjct: 342 RVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEE 401

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + ++ F  +    +RP+ +TLS  L +C  I SL   +++HGY++KNN  + + +GNA++
Sbjct: 402 ESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALV 461

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
             YA  G +D +  V +MM  +D I++ +L +   Q G  + A++    M     ++ D 
Sbjct: 462 DAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNK-DDVRMDG 520

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            +  + LSA +   +++ G ++    V   G        + ++DL G+ G + +A R   
Sbjct: 521 FSLASFLSAAAGIPIMETGKQLHCYSVKS-GLGSWISVSNGLVDLYGKCGCIHDAHRSF- 578

Query: 650 SQHIQARSDNWWALFSACAAHG----------NLRL--------------------GRII 679
            +  +  + +W  L    A++G          ++RL                    G + 
Sbjct: 579 LEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVD 638

Query: 680 AGL-----LLEREQDKPSV--YVLLSNIYAAAGLWEEAANIRELL 717
            GL     + E+   +P +  YV L ++   AG  EEA N+ E +
Sbjct: 639 MGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETM 683



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 2/161 (1%)

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           EY+L   + S     S+R G  IH  ++K      M L N +++LY KC  +  + ++F+
Sbjct: 15  EYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFD 74

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D  SW  L+SAY + G  +EA+  F +M   G   P++ T +  L +CS     +
Sbjct: 75  EMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEY-PNEFTLSTALRSCSALREFN 133

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
            GTR F ++V   GF       S ++D   + G   EA RV
Sbjct: 134 HGTR-FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRV 173


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 210/682 (30%), Positives = 342/682 (50%), Gaps = 43/682 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L+T ++ C  L +   G Q+ A+ + +GL  +  VAN++++++ N R +   +R+F   
Sbjct: 147 ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLF--- 203

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                                       D+M +RD   +NAMI+  +          +  
Sbjct: 204 ----------------------------DRMEERDRISWNAMISMYSHEEVYSKCFIVLS 235

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M   +V+ D  +  S++SVC  + L+  G  +HSL   SG  C V ++NAL+ MY   G
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVS 296
            + +A  +F        D IS+N M+          EAL     +L      P+ +TF S
Sbjct: 296 KLDEAESLFRNMSRR--DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSS 353

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            + AC  P     G  +HA  ++   +    + N+ +TMYS C  +++   +F  +   D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYD 413

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEM-IH 409
           +VS N +   YA      +A+  +  M+  GI+P+  T  +L     S G +    M +H
Sbjct: 414 VVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A+V   G++++  ++N+LI+ YA    ++ +  IF  ++ +++I+WN +I   + +G   
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + ++ F +   +  + D + L+  LSS A ++SL  G Q+HG  +KN L     + NA +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y KCG +DC L+       + T  WN LIS YA++G  KEA   FK M  VG+ KPD 
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQ-KPDY 652

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF A+LSACSHAGL+D G   ++SM   +G  P   H  C++DLLGR G   EAE+ I+
Sbjct: 653 VTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFID 712

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
              +      W +L S+   H NL +GR  A  LLE +    S YVLLSN+YA    W +
Sbjct: 713 EMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVD 772

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
              +R  +K   + K+P CSW+
Sbjct: 773 VDKLRSHMKTIKLNKRPACSWL 794



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 289/597 (48%), Gaps = 47/597 (7%)

Query: 58  YSLSTTLAACANL---RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           ++L++ + AC +      AA G  +HA   RAGL    ++   +L LY +   +++ +R+
Sbjct: 42  FALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRL 101

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+   +V SWT                               A++   + NG  +  +
Sbjct: 102 FWEMPQRNVVSWT-------------------------------AIMVALSSNGCMEEAL 130

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMY 233
             +R M K  V  +  + A+V+S+C A   E  G Q+ + V  SG    VSV N+LITM+
Sbjct: 131 VAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMF 190

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            N   V DA ++F+  +    D IS+N M+   +      +  I   DM    ++P   T
Sbjct: 191 GNLRRVQDAERLFDRMEER--DRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S++S C       +G  +H+  + SG      + NA + MYS+ GK+DEA  +F  + 
Sbjct: 249 LCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMS 308

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLASSGFIEMV---E 406
            +D++SWNTMIS+Y Q N    A+    + +Q+    P+  TF S L +    E +    
Sbjct: 309 RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGR 368

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IHA +    +   + + N+L++ Y+K   ++   ++F +M   ++++ N L  G+    
Sbjct: 369 TIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALE 428

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMSLG 525
                ++ FS +  + ++P+  T+     +C  +  L  +G  +H YV +  L+S   + 
Sbjct: 429 DVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYIT 488

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N++IT+YA CGDL+ S  +F+ +  K  ISWNA+I+A  +HG G+EA+  F   Q  G  
Sbjct: 489 NSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGN- 547

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           K D+      LS+ ++   +++G ++    V + G       ++  +D+ G+ G +D
Sbjct: 548 KLDRFCLAECLSSSANLASLEEGMQLHGLSVKN-GLDCDSHVVNATMDMYGKCGKMD 603



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 275/537 (51%), Gaps = 21/537 (3%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE-- 205
           MP R    +   ++GC   G E     L R M + DV    ++ AS+++ C+  G  E  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 206 -FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G  +H+L  ++G    V +  AL+ +Y + G V++A ++F E      + +S+  +M 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQR--NVVSWTAIMV 118

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
            L+S G +EEAL+ +R M    +  +     +V+S C        G QV A  + SG   
Sbjct: 119 ALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLT 178

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
           + SV+N+ ITM+ +  ++ +A  +F R++E+D +SWN MIS Y+   +     +   +M+
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              ++PD  T  SL+   ASS  + +   IH+    +G+  ++ + NAL++ Y+   ++ 
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLD 298

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSC 497
           +A  +F NMS R++I+WNT+I+ ++ +   V+ L+   +LL + E  P+  T S AL +C
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +   +L +G+ IH  +L+ +L + + +GN+++T+Y+KC  ++ + RVF  M   D +S N
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            L   YA   +   A+  F  M+  G IKP+  T   +   C   G +        + V 
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHG 671
             G +  E   + ++ +    G L+ +  +   IN++ + +    W A+ +A   HG
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS----WNAIIAANVRHG 530



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 213/463 (46%), Gaps = 40/463 (8%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++KPD+ +L + ++ CA+    A G+ +H+  + +GL     + N ++++Y  A  L   
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + +F  +   DV SW T +S+  +      A E   ++   D    N+M           
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSM----------- 349

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALI 230
                              +F+S L  C +   L  GR +H+++ +     ++ + N+L+
Sbjct: 350 -------------------TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLL 390

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TMY  C ++ D  +VFE    Y  D +S NV+  G A++  V  A+  F  M    ++P+
Sbjct: 391 TMYSKCNSMEDTERVFESMPCY--DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPN 448

Query: 291 ELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            +T +++   C         G  +HA   ++G  +   ++N+ ITMY++CG ++ +  IF
Sbjct: 449 YITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIF 508

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +R+  K ++SWN +I+   +   G  AI  +++ Q  G + D F     L+SS  +  +E
Sbjct: 509 SRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLE 568

Query: 407 ---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +H     NG+  +  V NA +  Y K  ++    +   + + R    WNTLI+G+ 
Sbjct: 569 EGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYA 628

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
             G+  +    F  ++    +PD  T    LS+C+    +  G
Sbjct: 629 RYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 43/456 (9%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N S+  ++  N  +++  +S    +AL    Q+  + +  P+  + S+ L AC++     
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +HA  L+  L+    + N++L++Y     +   +RVF  +   DV S         
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 135 KMGHVDYACEVFDKMPDRDL-PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            +  V  A  VF  M    + P Y  MI    +   + +G     ++H            
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMIN--LQGTCKSLG-----DLHS----------- 467

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
                       +G  LH+ VT++G      + N+LITMY  CG++  +  +F       
Sbjct: 468 ------------YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKS 515

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
              IS+N ++      GR EEA+  F D   A  +         +S+         G Q+
Sbjct: 516 V--ISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQL 573

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  ++K+G +  + V NA + MY  CGK+D           +    WNT+IS YA+    
Sbjct: 574 HGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYF 633

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNA 426
           + A   +  M SVG +PD  TF +LL++   +G I+  ++  ++     G+   I+    
Sbjct: 634 KEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVC 693

Query: 427 LISAYAKNERIKQAYQIFHNMS--PRNIITWNTLIN 460
           ++    +  +  +A +    M   P ++I W +L++
Sbjct: 694 IVDLLGRLGKFAEAEKFIDEMPVLPNDLI-WRSLLS 728



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 164/348 (47%), Gaps = 19/348 (5%)

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVE---MIH 409
           SW T +S  A+  L  +A      M+   +    F   SL+ +    G+ E       IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A     G++ N+ +  AL+  Y     +  A ++F  M  RN+++W  ++     NG   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  +  +    +  +   L+  +S C  +     G Q+  +V+ + L++ +S+ N++I
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS-CFKAMQDV--GRIK 586
           T++     +  + R+F+ M E+D ISWNA+IS Y+     +E  S CF  + D+  G +K
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH----EEVYSKCFIVLSDMRHGEVK 243

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  T  +++S C+ + LV  G+ I  S+    G   +   ++ ++++   AG LDEAE 
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 647 VINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           +  +    +R D  +W  + S+     +        G LL+ ++  P+
Sbjct: 303 LFRN---MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 218/676 (32%), Positives = 335/676 (49%), Gaps = 36/676 (5%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C   +    G  LHA  L  G  +   +AN++++LY           VF  I N DV
Sbjct: 17  LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDV 76

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW   ++A ++      +  V      R L + +  I     N +   G+         
Sbjct: 77  VSWNCLINAFSQQQAHAPSLHVMHLF--RQLVMAHKTIV---PNAHTLTGV--------- 122

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
                 ++ AS LS   AG     RQ H+L  K+  S  V   ++L+ MY   G V +A 
Sbjct: 123 ------FTAASTLSDSRAG-----RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEAR 171

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSAC 301
            +F+E      + +S+  M+ G AS    +EA   F+ M         +E  F SV+SA 
Sbjct: 172 DLFDEMPER--NAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSAL 229

Query: 302 LC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
            C      G QVH+ AMK+G     SV+NA +TMY  CG +++A   F     K+ ++W+
Sbjct: 230 TCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWS 289

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFIN 415
            M++ +AQ      A+  + +M   G  P EFT  G + A S    +VE   +H +    
Sbjct: 290 AMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKL 349

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G    + V +AL+  YAK   I  A + F  +   +++ W ++I G++ NG     L  +
Sbjct: 350 GYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLY 409

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            ++ +  + P++ T++  L +C+ +++L  GKQ+H  ++K N   ++ +G+A+  +YAKC
Sbjct: 410 GKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKC 469

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G LD   R+F  M  +D ISWNA+IS  +Q+G G E +  F+ M   G  KPD  TF  +
Sbjct: 470 GSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEG-TKPDNVTFVNL 528

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSH GLVD G   F  M +++   P  +H +CM+D+L RAG L EA+  I S  +  
Sbjct: 529 LSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDH 588

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W  L +A   H +  LG      L+E    + S YVLLS+IY A G WE+   +R 
Sbjct: 589 GLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRG 648

Query: 716 LLKRTGVIKQPGCSWI 731
           ++K  GV K+PGCSWI
Sbjct: 649 MMKARGVTKEPGCSWI 664



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 39/474 (8%)

Query: 41  LHLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           +HLF Q+  +HK + P+ ++L+    A + L ++  G Q HA A++         A+++L
Sbjct: 99  MHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLL 158

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y     +   + +F E+   +  SW T +S        D A E+F  M   +      
Sbjct: 159 NMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEE------ 212

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSG 218
              G  EN                      + F SVLS     +L   GRQ+HSL  K+G
Sbjct: 213 --KGKNEN---------------------EFVFTSVLSALTCYMLVNTGRQVHSLAMKNG 249

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
             C+VSV NAL+TMY  CG++ DA K FE +     + I+++ M+ G A  G  ++AL  
Sbjct: 250 LVCIVSVANALVTMYVKCGSLEDALKTFELSGNK--NSITWSAMVTGFAQFGDSDKALKL 307

Query: 279 FRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F DM  +   PSE T V V++AC   C  V G Q+H  ++K G+E    V +A + MY+ 
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAK 367

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG I +A   F  +Q+ D+V W ++I+ Y Q      A+  Y +MQ  G+ P++ T  S+
Sbjct: 368 CGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASV 427

Query: 396 LASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L +      ++  + +HA +        I + +AL + YAK   +   Y+IF  M  R++
Sbjct: 428 LKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDV 487

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           I+WN +I+G   NG   +GL+ F ++ +   +PD  T    LS+C+ +  +  G
Sbjct: 488 ISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRG 541



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 48/343 (13%)

Query: 7   TATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA 66
           T  ++GN N+     +  +  +   ++ G    AL LF  +H S +L P  ++L   + A
Sbjct: 276 TFELSGNKNS-----ITWSAMVTGFAQFGDSDKALKLFYDMHQSGEL-PSEFTLVGVINA 329

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C++      G Q+H Y+L+ G +   +V + ++ +Y     +V  ++ F  IQ PDV  W
Sbjct: 330 CSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLW 389

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T+                               +ITG  +NG  +  + L+ +M    V 
Sbjct: 390 TS-------------------------------IITGYVQNGDYEGALNLYGKMQLGGVI 418

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            ++ + ASVL  C +   L+ G+Q+H+ + K  FS  + + +AL  MY  CG++ D  ++
Sbjct: 419 PNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRI 478

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---- 301
           F        D IS+N M+ GL+  GR  E L  F  M +   +P  +TFV+++SAC    
Sbjct: 479 FWRMPAR--DVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMG 536

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEA 342
           L  R G+ V+ + M   F    +V + A  + + S  GK+ EA
Sbjct: 537 LVDR-GW-VYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEA 577



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           AL  C R   LR G+ +H  +L     S   + N++I LYAKC     +  VF+ +  KD
Sbjct: 16  ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75

Query: 553 TISWNALISAYAQ---HGEGKEAVSCFKAMQDVGR-IKPDQATFTAVLSACS 600
            +SWN LI+A++Q   H      +  F+ +    + I P+  T T V +A S
Sbjct: 76  VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAS 127


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 208/626 (33%), Positives = 331/626 (52%), Gaps = 20/626 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+Y  +  +S   + G  D A  +F++M  R++   N ++ G  +    +    +F EM 
Sbjct: 316 DLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK 375

Query: 182 KL-DVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSGFS-CLVSVVNALITMYFN 235
            L  +  D+Y    S  S  SV + G  + GR++H+ V ++G +   V++ N L+ MY  
Sbjct: 376 DLVGINSDSYVVLLSAFSEFSVLEEGRRK-GREVHAHVIRTGLNDNKVAIGNGLVNMYAK 434

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
            G + DAC VFE       D +S+N ++ GL      E+A   F  M      PS  T +
Sbjct: 435 SGAIADACSVFELMVEK--DSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLI 492

Query: 296 SVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S +S+C       +G Q+H   +K G +   SVSNA + +Y+  G   E   +F+ + E 
Sbjct: 493 STLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY 552

Query: 353 DIVSWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           D VSWN++I   +      S A+  +L+M   G      TF ++L++   + + E+   I
Sbjct: 553 DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 612

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGF 467
           HA V    +  +  + NAL+S Y K   + +  +IF  MS  R+ ++WN++I+G++ N  
Sbjct: 613 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 672

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +     ++    R D +T +  LS+CA +++L  G ++H   ++  L S + +G+A
Sbjct: 673 LHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSA 732

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y+KCG +D + R F +M  ++  SWN++IS YA+HG G++A+  F  M   G+  P
Sbjct: 733 LVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ-PP 791

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  VLSACSH G V++G   F SM   Y   P  +H SCM+DLLGRAG LDE    
Sbjct: 792 DHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDF 851

Query: 648 INSQHIQARSDNWWALFSACA-AHG-NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           INS  ++     W  +  AC  A+G N  LGR  A +LLE E      YVLL+N+YA+  
Sbjct: 852 INSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGE 911

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            WE+ A  R  +K   V K+ GCSW+
Sbjct: 912 KWEDVAKARTAMKEAAVKKEAGCSWV 937



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 284/595 (47%), Gaps = 62/595 (10%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +LH  +++ G      ++NT++++Y    DL S +++F E+ N ++ +W   +S  T+ G
Sbjct: 92  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 151

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
             D AC                                 FR+M +     ++Y+F S L 
Sbjct: 152 KPDEAC-------------------------------ARFRDMVRAGFIPNHYAFGSALR 180

Query: 198 VC-DAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC-GNVVDACKVFEEAKGYV 253
            C ++G    + G Q+H L++K+ +   V V N LI+MY +C  +  DA  VF+     +
Sbjct: 181 ACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIG--I 238

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDM----LVASLRPSELTFVSVMSACLCPRVGY- 308
            + IS+N ++   +  G    A   F  M    L  S +P+E TF S+++   C  V + 
Sbjct: 239 RNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTA-CSSVDFG 297

Query: 309 -----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
                Q+ A+  KSGF     VS+A ++ ++  G  D+A  IF ++  +++VS N ++  
Sbjct: 298 LCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVG 357

Query: 364 YAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVE-------MIHAFVFIN 415
             ++  G +A   + EM+  VGI  D +    LL++     ++E        +HA V   
Sbjct: 358 LVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRT 415

Query: 416 GIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           G+  N + + N L++ YAK+  I  A  +F  M  ++ ++WN+LI+G   N       + 
Sbjct: 416 GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAES 475

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  +  +   P  +TL   LSSCA +  +  G+QIH   LK  L + +S+ NA++ LYA+
Sbjct: 476 FHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAE 535

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQ-HGEGKEAVSCFKAMQDVGRIKPDQATFT 593
            G     L+VF++M E D +SWN++I A +       +AV  F  M   G     + TF 
Sbjct: 536 TGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMR-GGWGLSRVTFI 594

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            +LSA S   L +   +I  ++V  Y         + +L   G+ G ++E E++ 
Sbjct: 595 NILSAVSSLSLHEVSHQI-HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 648



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 227/430 (52%), Gaps = 30/430 (6%)

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           E  R+LH    K GF   + + N LI +Y   G++  A K+F+E      + +++  ++ 
Sbjct: 88  EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR--NLVTWACLIS 145

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL------CPRVGYQVHAQAMKSG 318
           G    G+ +EA  RFRDM+ A   P+   F S + AC       C ++G Q+H    K+ 
Sbjct: 146 GYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC-KLGVQIHGLISKTR 204

Query: 319 FEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           + +   V N  I+MY SC    ++A  +F  +  ++ +SWN++IS Y++R    SA   +
Sbjct: 205 YGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLF 264

Query: 378 LEMQSVGI----RPDEFTFGSLLASS------GFIEMVEMIHAFVFINGIITNIQVSNAL 427
             MQ  G+    +P+E+TFGSL+ ++      G   + +M+ A V  +G + ++ VS+AL
Sbjct: 265 SSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQML-ARVEKSGFLQDLYVSSAL 323

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPD 486
           +S +A+      A  IF  M  RN+++ N L+ G +         + F E+  +  +  D
Sbjct: 324 VSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 383

Query: 487 EYTLSVALSSCARISSL----RHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCS 541
            Y   V LS+ +  S L    R G+++H +V++  L  +K+++GN ++ +YAK G +  +
Sbjct: 384 SYV--VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 441

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF +M+EKD++SWN+LIS   Q+   ++A   F  M+  G + P   T  + LS+C+ 
Sbjct: 442 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSM-PSNFTLISTLSSCAS 500

Query: 602 AGLVDDGTRI 611
            G +  G +I
Sbjct: 501 LGWIMLGEQI 510



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 211/471 (44%), Gaps = 43/471 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L ++   +DA   F ++  +  + P  ++L +TL++CA+L     G Q+H   L
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSM-PSNFTLISTLSSCASLGWIMLGEQIHCDGL 515

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     V+N +L+LY          +VFS +   D  SW + + A            
Sbjct: 516 KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA------------ 563

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
               + D +  V  A              +  F +M +        +F ++LS V    L
Sbjct: 564 ----LSDSEASVSQA--------------VKYFLQMMRGGWGLSRVTFINILSAVSSLSL 605

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E   Q+H+LV K   S   ++ NAL++ Y  CG + +  K+F        D +S+N M+
Sbjct: 606 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSE-TRDEVSWNSMI 664

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G      + +A+     M+    R    TF +++SAC        G +VHA  +++  E
Sbjct: 665 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLE 724

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V +A + MYS CG+ID A   F  +  +++ SWN+MIS YA+   G  A+  +  M
Sbjct: 725 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 784

Query: 381 QSVGIRPDEFTFGSLLASS---GFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNER 436
              G  PD  TF  +L++    GF+E   E   +   +  +   ++  + ++    +  +
Sbjct: 785 MLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGK 844

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFL-LNGFPVQGLQHFSELLMSELRP 485
           + +     ++M  + N++ W T++      NG   +  +  +E+L+ EL P
Sbjct: 845 LDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLL-ELEP 894



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 13/249 (5%)

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G + N+ +SN LI+ Y +   +  A ++F  MS RN++TW  LI+G+  NG P +    F
Sbjct: 101 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 160

Query: 476 SELLMSELRPDEYTLSVALSSCAR--ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            +++ +   P+ Y    AL +C     S  + G QIHG + K    S + + N +I++Y 
Sbjct: 161 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 220

Query: 534 KCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG---RIKPDQ 589
            C D     R VF+ +  +++ISWN++IS Y++ G+   A   F +MQ  G     KP++
Sbjct: 221 SCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNE 280

Query: 590 ATFTAVL-SACSHAGLVDDGTRIFDSM---VNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            TF +++ +ACS    VD G  + + M   V   GF+      S ++    R G  D+A+
Sbjct: 281 YTFGSLITTACSS---VDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAK 337

Query: 646 RVINSQHIQ 654
            +     ++
Sbjct: 338 NIFEQMGVR 346



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 161/342 (47%), Gaps = 19/342 (5%)

Query: 285 ASLRPSELTFVSVMS---ACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            +L  S  TF S+++      C     ++H Q++K GF     +SN  I +Y   G +  
Sbjct: 65  TTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGS 124

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----- 396
           A  +F  +  +++V+W  +IS Y Q      A   + +M   G  P+ + FGS L     
Sbjct: 125 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 184

Query: 397 -ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN-ERIKQAYQIFHNMSPRNIIT 454
              SG  ++   IH  +      +++ V N LIS Y    +    A  +F  +  RN I+
Sbjct: 185 SGPSG-CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSIS 243

Query: 455 WNTLINGFLLNGFPVQGLQHFS----ELLMSELRPDEYTL-SVALSSCARIS-SLRHGKQ 508
           WN++I+ +   G  V     FS    E L    +P+EYT  S+  ++C+ +   L   +Q
Sbjct: 244 WNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQ 303

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +   V K+  +  + + +A+++ +A+ G  D +  +F  M  ++ +S N L+    +  +
Sbjct: 304 MLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQ 363

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           G+ A   F  M+D+  I  D  ++  +LSA S   ++++G R
Sbjct: 364 GEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRR 403


>gi|357514793|ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358344437|ref|XP_003636296.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|358345563|ref|XP_003636846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502231|gb|AES83434.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502781|gb|AES83984.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521707|gb|AET02161.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 212/687 (30%), Positives = 349/687 (50%), Gaps = 51/687 (7%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L+ +  AC        G Q+H + +  G  +   V+N+++ +Y  A        VF
Sbjct: 85  DEVTLALSFKACRG--EFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVF 142

Query: 116 SEIQNPDVYSWTTFLSACTK-MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
             +  PD+ SW T LS   K +  +++AC +       D   Y   ++ C +  Y D   
Sbjct: 143 EGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWD--- 199

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
                                    D G L FG QLHSLV K GF C V + NAL+TMY 
Sbjct: 200 -------------------------DHGFL-FGLQLHSLVVKCGFGCEVFIGNALVTMYS 233

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE--EALIRFRDMLVASLRPSEL 292
             G + +A +VF E    + D +S+N M+ G A  G     EA++ F +M+   +    +
Sbjct: 234 RWGGLDEAGRVFNEMT--IRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHV 291

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           +    +SAC   +    G Q+H  A K G+  + +V N  I+ YS C  + +A  +F  +
Sbjct: 292 SLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDM 351

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE--- 406
             +++VSW T+IS   +     + +  +  M+  G+ P++ TF  LL +     MV+   
Sbjct: 352 SARNVVSWTTLISIDEE-----NVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGL 406

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           M+H     + + +   VSN+LI+ YAK E I+++ +IF  ++ +  I+WN LI+G+  NG
Sbjct: 407 MVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNG 466

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSL 524
              +    F   +  E++P++YT    L++ A     SL+HG++ H +++K  L +   +
Sbjct: 467 LCKEAFLTFLSAI-KEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFV 525

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             A++ +Y K G+++ S RVFN   EK   SW  +ISAYA+HG+ +  +S +K ++  G 
Sbjct: 526 AGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGS 585

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
              D  TF +VL+AC   G+VD G  IFDSMV  +   P  +H S M+D+LGR G LDEA
Sbjct: 586 -NLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEA 644

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           E +++            +L  +C  HGN+ +   +   L++ +      YVL++N+YA  
Sbjct: 645 EELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEK 704

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G WE+ A +R+ ++  GV K+ G SW+
Sbjct: 705 GNWEKVAEVRKGMRGRGVKKEVGFSWV 731



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 274/567 (48%), Gaps = 44/567 (7%)

Query: 130 LSACTKMGHV--DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
              C K+ H    +   +F+K+P  +    N  +            + +F+   +    +
Sbjct: 23  FKTCLKLFHSLKKHEHNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQ 82

Query: 188 --DNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
             D  + A     C    +  G Q+H  V  +GF   V+V N+L+ MY   G    A  V
Sbjct: 83  NIDEVTLALSFKACRGEFI-LGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCV 141

Query: 246 FEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           FE   G  C D +S+N ++ G     +  +AL     M +  +    +T+ + +S C   
Sbjct: 142 FE---GLSCPDIVSWNTILSGFE---KSVDALNFACFMHLNGVVFDPVTYTTALSFCWDR 195

Query: 305 R--------VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
                     G Q+H+  +K GF     + NA +TMYS  G +DEA  +F  +  +D+VS
Sbjct: 196 DYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVS 255

Query: 357 WNTMISTYAQRN--LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAF 411
           WN M+S YAQ     G  A+L +  M   G+  D  +    +++ G+   +E  + IH  
Sbjct: 256 WNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGL 315

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  T++ V N LIS Y+K + ++ A  +F +MS RN+++W TLI+   ++   V  
Sbjct: 316 AQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLIS---IDEENVVS 372

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F+ + +  + P++ T    L +    + ++ G  +HG  LK+ L S+ ++ N++IT+
Sbjct: 373 L--FNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITM 430

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAK   +  S ++F  +  + TISWNALIS YAQ+G  KEA   F  +  +  IKP+Q T
Sbjct: 431 YAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTF--LSAIKEIKPNQYT 488

Query: 592 FTAVLSACSHAGLV--DDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           F +VL+A + A  +    G R    ++    N   F+        +LD+ G+ G ++E++
Sbjct: 489 FGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAG-----ALLDMYGKRGNINESQ 543

Query: 646 RVINSQHIQARSDNWWALFSACAAHGN 672
           RV N +  +    +W  + SA A HG+
Sbjct: 544 RVFN-ETPEKTQFSWTGMISAYARHGD 569



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 14/208 (6%)

Query: 34  SGHYQDAL--HLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGL 88
           SG+ Q+ L    F+   S+ K +KP+ Y+  + L A A   + +   G + H++ ++ GL
Sbjct: 460 SGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGL 519

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
              P VA  +L +Y    ++   +RVF+E      +SWT  +SA  + G  +    ++ +
Sbjct: 520 NTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKE 579

Query: 149 MP----DRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLSVCDA 201
           +     + D   + +++  C   G  D+G  +F  M   H ++   ++YS   V  +   
Sbjct: 580 IEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIM-VDMLGRV 638

Query: 202 GLLEFGRQL-HSLVTKSGFSCLVSVVNA 228
           G L+   +L H +    G S L S++ +
Sbjct: 639 GRLDEAEELMHQIPGGPGLSVLQSLLGS 666


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 216/636 (33%), Positives = 322/636 (50%), Gaps = 79/636 (12%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +N +I         +  + LFR M  L    D+Y+F  V   C +    E G  +H  V 
Sbjct: 94  WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHISYNVMMDGLASVGRVE 273
           + GF   V V NA+I+MY  C  VV A KVF+E   +G +CD +++N ++   +      
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRG-ICDSVTWNSIVSVYSHCFVPN 212

Query: 274 EALIRFRDMLVA-SLRPSELTFVSVMSAC------LCPRVGYQVHAQAMKSGFEAYTSVS 326
            A+  FR+M V   + P  +  V+++  C      LC   G QVH   ++SG      V 
Sbjct: 213 VAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLC---GRQVHGFCVRSGLVEDVFVG 269

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM-------------------------- 360
           NA + MY+ CGK+++A  +F R++ KD+V+WN M                          
Sbjct: 270 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 329

Query: 361 ---------ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMI 408
                    IS YAQR  G  A+  + +M     RP+  T  SLL   AS G +   +  
Sbjct: 330 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 389

Query: 409 HAFV--FI-----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLI 459
           H +   FI     N    ++ V NALI  YAK + ++ A  +F  + P  R+++TW  +I
Sbjct: 390 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 449

Query: 460 NGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
            G+  +G     LQ FSE+   +  + P+++T+S  L +CAR+++L+ GKQIH YVL+ +
Sbjct: 450 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRS 509

Query: 518 LISK--MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
            I    + + N +I +Y+K GD+D +  VF+ M +++ +SW +L++ Y  HG  ++A   
Sbjct: 510 RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRV 569

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M+    +  D  TF  VL ACSH+G+             D+G  P  +H +CM+DLL
Sbjct: 570 FDEMRKEALVL-DGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLL 615

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GRAG L EA R+IN   I+     W AL SAC  H N  L    A  LLE + D    Y 
Sbjct: 616 GRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYT 675

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSNIYA A  W++ A I  L+KRTG+ K PG SW+
Sbjct: 676 LLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWV 711



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 174/677 (25%), Positives = 293/677 (43%), Gaps = 118/677 (17%)

Query: 6   ITATIAGNSNTSKELLLKLNISLANLS---------RSGHYQD---ALHLFVQIHSSHKL 53
           I   I+ NS T+  LLL+ N++ ++ S          + H+     AL LF ++ + H  
Sbjct: 64  IYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLH-W 122

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
            PD Y+      AC  + N   G  +H   +R G ++   V N ++S+Y   + +V  ++
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VF E+          +   C                   D   +N++++  +     ++ 
Sbjct: 183 VFDEL---------CYRGIC-------------------DSVTWNSIVSVYSHCFVPNVA 214

Query: 174 IGLFREMH-KLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
           + LFREM     +  D     ++L VC   GL   GRQ+H    +SG    V V NAL+ 
Sbjct: 215 VSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVD 274

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL-----IR-------- 278
           MY  CG + DA KVFE  +    D +++N M+ G +  GR E+AL     +R        
Sbjct: 275 MYAKCGKMEDANKVFERMR--FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDV 332

Query: 279 ----------------------FRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
                                 FR M     RP+ +T +S++SAC        G + H  
Sbjct: 333 VTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCY 392

Query: 314 AMKSGFEAY-------TSVSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNTMISTY 364
           ++K   +          +V NA I MY+ C  ++ A  +F  +  +++D+V+W  MI  Y
Sbjct: 393 SVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGY 452

Query: 365 AQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
           AQ      A+  + EM  +   I P++FT   +L   A    ++  + IHA+V     I 
Sbjct: 453 AQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRID 512

Query: 420 N--IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           +  + V+N LI  Y+K+  +  A  +F +MS RN ++W +L+ G+ ++G      + F E
Sbjct: 513 SDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDE 572

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHG--KQIHGYVLKNNLISKMSLGNAMITLYAKC 535
           +    L  D  T  V L +C+  S +  G    +  Y               M+ L  + 
Sbjct: 573 MRKEALVLDGITFLVVLYACSH-SGMDFGVDPGVEHYA-------------CMVDLLGRA 618

Query: 536 GDLDCSLRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           G L  ++R+ N M IE   + W AL+SA   H    E ++ F A + +     +  T+T 
Sbjct: 619 GRLGEAMRLINDMPIEPTPVVWIALLSACRIH--SNEELAEFAAKKLLELKADNDGTYTL 676

Query: 595 VLSACSHAGLVDDGTRI 611
           + +  ++A    D  RI
Sbjct: 677 LSNIYANARRWKDVARI 693



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 165/318 (51%), Gaps = 14/318 (4%)

Query: 310 VHAQAMKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFAR---LQEKDIVSWNTMISTY 364
           +H Q + +G    +YT+V+N   T Y S   I  A ++  +        +  WN +I   
Sbjct: 43  LHQQYIINGHLLNSYTNVTNLIYT-YISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHA 101

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
              N   +A+  +  M+++   PD +TF  +  + G I   E+   IH  V   G  +N+
Sbjct: 102 LHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNV 161

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNI---ITWNTLINGFLLNGFPVQGLQHFSEL 478
            V NA+IS Y K + +  A ++F  +  R I   +TWN++++ +     P   +  F E+
Sbjct: 162 FVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREM 221

Query: 479 LMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
            +   + PD   +   L  C  +     G+Q+HG+ +++ L+  + +GNA++ +YAKCG 
Sbjct: 222 TVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGK 281

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ + +VF  M  KD ++WNA+++ Y+Q+G  ++A+S F  M++  +I+ D  T+++V+S
Sbjct: 282 MEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMRE-EKIESDVVTWSSVIS 340

Query: 598 ACSHAGLVDDGTRIFDSM 615
             +  G   +   +F  M
Sbjct: 341 GYAQRGFGCEAMDVFRQM 358



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 118/506 (23%), Positives = 227/506 (44%), Gaps = 37/506 (7%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A+ LF ++   + + PD   +   L  C  L     G Q+H + +R+GL     V N ++
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALV 273

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR----DLP 155
            +Y     +    +VF  ++  DV +W   ++  ++ G  + A  +F KM +     D+ 
Sbjct: 274 DMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
            ++++I+G  + G+    + +FR+M     R +  +  S+LS C   G L  G++ H   
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393

Query: 215 TK-------SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            K       +  +  ++V+NALI MY  C ++  A  +F+E      D +++ VM+ G A
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYA 453

Query: 268 SVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF--E 320
             G    AL  F +M      + P++ T   V+ AC      + G Q+HA  ++      
Sbjct: 454 QHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDS 513

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+N  I MYS  G +D A ++F  + +++ VSW ++++ Y        A   + EM
Sbjct: 514 DVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEM 573

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           +   +  D  TF  +L +     M      F    G+   ++    ++    +  R+ +A
Sbjct: 574 RKEALVLDGITFLVVLYACSHSGM-----DF----GVDPGVEHYACMVDLLGRAGRLGEA 624

Query: 441 YQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            ++ ++M   P  ++ W  L++   ++    + L  F+   + EL+ D       LS+  
Sbjct: 625 MRLINDMPIEPTPVV-WIALLSACRIHS--NEELAEFAAKKLLELKADNDGTYTLLSNI- 680

Query: 499 RISSLRHGKQIH--GYVLKNNLISKM 522
             ++ R  K +   GY++K   I K+
Sbjct: 681 -YANARRWKDVARIGYLMKRTGIKKI 705


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 205/699 (29%), Positives = 351/699 (50%), Gaps = 44/699 (6%)

Query: 39   DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
            +A  +F Q+  ++ ++P++ +  + +  C N  N  +G  LHA+ ++  L +   VA  +
Sbjct: 340  EAFKMFQQMLKAN-MQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATAL 398

Query: 99   LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
            LS+Y                                K+G ++ A  +F +MP R+L  +N
Sbjct: 399  LSMY-------------------------------AKLGDLNSADFIFYQMPRRNLLSWN 427

Query: 159  AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVT 215
            +MI+G   NG  +  +  F +M       D  S  ++LS C   +A LL  G+  H+   
Sbjct: 428  SMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILL--GKAAHAFSF 485

Query: 216  KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            +  F   +++ NAL+  Y +CG +  + K+F+  K  + + IS+N ++ G    G  ++A
Sbjct: 486  RKEFDSNLNISNALLAFYSDCGKLSSSFKLFQ--KMPLRNAISWNTLISGCVHNGDTKKA 543

Query: 276  LIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITM 332
            +     M    +    +T +S++  C        G  +H  A+K+GF    S+ NA I+M
Sbjct: 544  VALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISM 603

Query: 333  YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
            Y +CG I+    +F  +  + IVSWN +I+ Y    L    + ++ +M   G +P+  T 
Sbjct: 604  YFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTL 663

Query: 393  GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
             +LL S   +   + IHAF    G+I    +  +LIS YA+ E I     +F      +I
Sbjct: 664  LNLLPSCRTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDI 723

Query: 453  ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
              WN +++ ++      + +  F ELL + + PD  T    +S+C ++SSL     +  Y
Sbjct: 724  ALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAY 783

Query: 513  VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            V++      + + NA+I L+A+CG++  + ++F  +  KD +SW+ +I+ Y  HG+ + A
Sbjct: 784  VIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAA 843

Query: 573  VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
            ++    M+  G +KPD  T+ +VLSACSH G +D G  IF+SMV + G     +H +CM+
Sbjct: 844  LALLSQMRLSG-MKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMV 901

Query: 633  DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
            DLLGR G L+EA   +     +       +L  AC  HGN++LG  I+ LL E +     
Sbjct: 902  DLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSG 961

Query: 693  VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             YV+L NIYAAAG W +A  +R  ++   + K PG S +
Sbjct: 962  SYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1000



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 188/750 (25%), Positives = 347/750 (46%), Gaps = 90/750 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +  L   G ++D L ++++         D ++    + AC  L        +H   L
Sbjct: 124 NLMIRRLCDHGLFEDVLCVYLKCRV-LGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVL 182

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    +   ++  Y     +V  + V  +I  PD+ +W                  
Sbjct: 183 RTSFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTW------------------ 224

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                        NA+I+G + NG++     + R+++++ ++ +  +FAS++ +C     
Sbjct: 225 -------------NALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKC 271

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G+ +H  V KSGFS    +  ALI+MY   GN+  A  +F+ A     + + +N M+
Sbjct: 272 LDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEK--NVVIWNSMI 329

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A   +  EA   F+ ML A+++P+ +TFVS++  C        G  +HA  MK   +
Sbjct: 330 SAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLD 389

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV+ A ++MY+  G ++ A  IF ++  ++++SWN+MIS Y    L  +++ A+ +M
Sbjct: 390 SQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDM 449

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G  PD  +  ++L++   +E +   +  HAF F     +N+ +SNAL++ Y+   ++
Sbjct: 450 QFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKL 509

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             ++++F  M  RN I+WNTLI+G + NG   + +    ++   ++  D  TL   +  C
Sbjct: 510 SSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 569

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
               +L  G  +HGY +K      +SL NA+I++Y  CGD++    +F +M  +  +SWN
Sbjct: 570 RVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWN 629

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS--------HAGLVDDG- 608
           ALI+ Y  H    E ++ F  M   G+ KP+  T   +L +C         HA  V  G 
Sbjct: 630 ALITGYRFHYLQNEVMASFCQMIREGQ-KPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGV 688

Query: 609 ---TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA-ERVINSQHIQARSD------ 658
              T I  S+++ Y      ++++  + L    G  D A    I S ++Q ++       
Sbjct: 689 IVETPIITSLISMYARF---ENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTF 745

Query: 659 --------------NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN----I 700
                          + +L SAC    +L L   +   ++++  DK   ++++SN    +
Sbjct: 746 FCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDK---HIVISNALIDL 802

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           +A  G    A  I E     G+  +   SW
Sbjct: 803 FARCGNISIAKKIFE-----GLSSKDAVSW 827



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/613 (25%), Positives = 296/613 (48%), Gaps = 18/613 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREM 180
           D Y    F+ +C  +G  + A   F+ +    + + N MI    ++G +ED+ + ++ + 
Sbjct: 88  DEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDV-LCVYLKC 146

Query: 181 HKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L    D+++F  V+  C A G +     +H +V ++ F   + +  AL+  Y   G +
Sbjct: 147 RVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRM 206

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
           V A  V ++      D +++N ++ G +  G  +E     R +    L+P+  TF S++ 
Sbjct: 207 VKARLVLDKISQ--PDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIP 264

Query: 300 ACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C    C  +G  +H   +KSGF +   ++ A I+MY+  G +  A  +F    EK++V 
Sbjct: 265 LCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVI 324

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVF 413
           WN+MIS YAQ      A   + +M    ++P+  TF S++    +S      + +HA V 
Sbjct: 325 WNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVM 384

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              + + + V+ AL+S YAK   +  A  IF+ M  RN+++WN++I+G+  NG     + 
Sbjct: 385 KYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMD 444

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++      PD  ++   LS+C+++ ++  GK  H +  +    S +++ NA++  Y+
Sbjct: 445 AFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYS 504

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
            CG L  S ++F  M  ++ ISWN LIS    +G+ K+AV+    MQ   +++ D  T  
Sbjct: 505 DCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQ-EKMELDLVTLI 563

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           +++  C  A  +  G  +    +   GF      ++ ++ +    G ++  + +   + +
Sbjct: 564 SIIPICRVAENLIQGMTLHGYAIKT-GFACDVSLVNALISMYFNCGDINAGKFLF--EVM 620

Query: 654 QARSD-NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
             RS  +W AL +    H  L+   + +   + RE  KP+ YV L N+  +     +  +
Sbjct: 621 PWRSIVSWNALITGYRFH-YLQNEVMASFCQMIREGQKPN-YVTLLNLLPSCRTLLQGKS 678

Query: 713 IRELLKRTGVIKQ 725
           I     RTGVI +
Sbjct: 679 IHAFAVRTGVIVE 691



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/666 (22%), Positives = 308/666 (46%), Gaps = 53/666 (7%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  L+  N  ++  S +G  ++   +  QI+    LKP++ + ++ +  C  ++    G
Sbjct: 217 SQPDLVTWNALISGYSLNGFDKEVFEVLRQINE-MGLKPNVSTFASIIPLCTRMKCLDIG 275

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H + +++G  +   +   ++S+Y    +L   + +F      +V  W + +SA    
Sbjct: 276 KSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISA---- 331

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
               YA                       +N        +F++M K +++ +  +F S++
Sbjct: 332 ----YA-----------------------QNQKSSEAFKMFQQMLKANMQPNVVTFVSII 364

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C+ +    +G+ LH+ V K      +SV  AL++MY   G++  A  +F +      +
Sbjct: 365 PCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR--N 422

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHA 312
            +S+N M+ G    G  E ++  F DM      P  ++ V+++SAC       +G   HA
Sbjct: 423 LLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHA 482

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            + +  F++  ++SNA +  YS CGK+  +  +F ++  ++ +SWNT+IS        + 
Sbjct: 483 FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKK 542

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALIS 429
           A+    +MQ   +  D  T  S++      E +     +H +    G   ++ + NALIS
Sbjct: 543 AVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALIS 602

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y     I     +F  M  R+I++WN LI G+  +    + +  F +++    +P+  T
Sbjct: 603 MYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVT 662

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   L SC    +L  GK IH + ++  +I +  +  ++I++YA+  +++  + +F M  
Sbjct: 663 LLNLLPSC---RTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGG 719

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           ++D   WNA++S Y Q    KE+V+ F  +    R++PD  TF +++SAC     ++   
Sbjct: 720 KEDIALWNAIMSVYVQTKNAKESVTFFCELLH-ARVEPDYITFLSLISACVQLSSLNLSN 778

Query: 610 RIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            +   ++   GF   + H+   + ++DL  R G +  A+++         + +W  + + 
Sbjct: 779 SVMAYVIQK-GF---DKHIVISNALIDLFARCGNISIAKKIFEGLS-SKDAVSWSTMING 833

Query: 667 CAAHGN 672
              HG+
Sbjct: 834 YGLHGD 839



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 259/555 (46%), Gaps = 39/555 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           LL  N  ++    +G ++ ++  F  +       PD  S+   L+AC+ L     G   H
Sbjct: 423 LLSWNSMISGYGHNGLWEASMDAFCDMQF-EGFDPDAISIVNILSACSKLEAILLGKAAH 481

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A++ R    +  +++N +L+ Y +   L S  ++F ++   +  SW T +S         
Sbjct: 482 AFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLIS--------- 532

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                                 GC  NG     + L  +M +  +  D  +  S++ +C 
Sbjct: 533 ----------------------GCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICR 570

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            A  L  G  LH    K+GF+C VS+VNALI+MYFNCG+ ++A K   E   +    +S+
Sbjct: 571 VAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGD-INAGKFLFEVMPWR-SIVSW 628

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           N ++ G        E +  F  M+    +P+ +T ++++ +C     G  +HA A+++G 
Sbjct: 629 NALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGV 688

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
              T +  + I+MY+    I+    +F    ++DI  WN ++S Y Q    + ++  + E
Sbjct: 689 IVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCE 748

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +    + PD  TF SL+++      + +   + A+V   G   +I +SNALI  +A+   
Sbjct: 749 LLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGN 808

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I  A +IF  +S ++ ++W+T+ING+ L+G     L   S++ +S ++PD  T +  LS+
Sbjct: 809 ISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSA 868

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           C+    +  G  I   +++  +  +M     M+ L  + G L+ +      +  K ++S 
Sbjct: 869 CSHGGFIDQGWMIFNSMVEEGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSL 928

Query: 556 WNALISAYAQHGEGK 570
             +L+ A   HG  K
Sbjct: 929 LESLLGACIIHGNVK 943


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 213/708 (30%), Positives = 360/708 (50%), Gaps = 50/708 (7%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  + A+ +F ++     ++ D  +    L ACA L + + G  +HA+ + +GLK    +
Sbjct: 107 GQAKRAIGMFHRMQQE-GVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVL 165

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN +L +Y +                                G V  A  +F+KM +RDL
Sbjct: 166 ANLLLHIYGSC-------------------------------GCVASAMLLFEKM-ERDL 193

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             +NA I    ++G   I + LF+ M    VR    +    L+VC    +   + +H +V
Sbjct: 194 VSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC--ATIRQAQAIHFIV 251

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            +SG    + V  AL + Y   G++  A +VF+ A     D +S+N M+   A  G + E
Sbjct: 252 RESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAER--DVVSWNAMLGAYAQHGHMSE 309

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           A + F  ML   + PS++T V+  + C   R G  +H  A++ G +    + NA + MY+
Sbjct: 310 AALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYT 369

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG  +EA  +F R+   + VSWNTMI+  +Q+   + A+  +  MQ  G+ P   T+ +
Sbjct: 370 RCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLN 428

Query: 395 LL--ASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN- 446
           LL   +S   E   M     +H+ +   G  +   +  A++  YA    I +A   F   
Sbjct: 429 LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRG 488

Query: 447 -MSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            M  R ++++WN +I+    +G   + L  F  + +  + P++ T    L +CA  ++L 
Sbjct: 489 AMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALT 548

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAY 563
            G+ +H ++  + + S + +  A+ ++Y +CG L+ +  +F  + +E+D + +NA+I+AY
Sbjct: 549 EGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAY 608

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           +Q+G   EA+  F  MQ  G  +PD+ +F +VLSACSH GL D+G  IF SM   YG  P
Sbjct: 609 SQNGLAGEALKLFWRMQQEGS-RPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAP 667

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
           +EDH +C +D+LGRAG+L +AE +I    ++     W  L  AC  + ++  GR+   ++
Sbjct: 668 SEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMV 727

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E +    S YV+LSNI A AG W+EAA +R  ++  G+ K+ G SWI
Sbjct: 728 RELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/533 (28%), Positives = 258/533 (48%), Gaps = 23/533 (4%)

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           C  +G V+   EVF ++  RD   +  +IT  TE+G     IG+F  M +  VR D  +F
Sbjct: 75  CESLGDVE---EVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTF 131

Query: 193 ASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            +VL  C   G L  GR +H+ + +SG      + N L+ +Y +CG V  A  +FE+ + 
Sbjct: 132 LAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMER 191

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              D +S+N  +   A  G +  AL  F+ M +  +RP+ +T V  ++ C   R    +H
Sbjct: 192 ---DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIH 248

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               +SG E    VS A  + Y+  G + +A  +F R  E+D+VSWN M+  YAQ     
Sbjct: 249 FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMS 308

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
            A L +  M   GI P + T  +       +    MIH      G+  +I + NAL+  Y
Sbjct: 309 EAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMY 368

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT-- 489
            +    ++A  +F  + P N ++WNT+I G    G   + ++ F  + +  + P   T  
Sbjct: 369 TRCGSPEEARHLFKRI-PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYL 427

Query: 490 --LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN- 546
             L    S+     ++  G+++H  ++     S+ ++G A++ +YA CG +D +   F  
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487

Query: 547 --MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
             M    D +SWNA+IS+ +QHG GK A+  F+ M D+  + P+Q T  AVL AC+ A  
Sbjct: 488 GAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAA 546

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQ 654
           + +G  + D + +       E +L   + +  + GR G L+ A  +     ++
Sbjct: 547 LTEGEIVHDHLRHS----GMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 176/375 (46%), Gaps = 24/375 (6%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G ++HA+ +  G E    + N  + +Y  C  + +   +F+RL+ +D  SW T+I+ Y +
Sbjct: 48  GRRIHARIVSLGLE--EELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTE 105

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
               + AI  +  MQ  G+R D  TF ++L   A  G +     IHA++  +G+     +
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVL 165

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +N L+  Y     +  A  +F  M  R++++WN  I     +G     L+ F  + +  +
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGV 224

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
           RP   TL +AL+ CA   ++R  + IH  V ++ L   + +  A+ + YA+ G L  +  
Sbjct: 225 RPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKE 281

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF+   E+D +SWNA++ AYAQHG   EA   F  M   G I P + T     + CS   
Sbjct: 282 VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEG-ISPSKVTLVNASTGCS--- 337

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
                +  F  M++        D      + +LD+  R G  +EA  +   + I   + +
Sbjct: 338 -----SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF--KRIPCNAVS 390

Query: 660 WWALFSACAAHGNLR 674
           W  + +  +  G ++
Sbjct: 391 WNTMIAGSSQKGQMK 405



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 152/347 (43%), Gaps = 49/347 (14%)

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IHA +   G+    ++ N L+  Y K E +    ++F  +  R+  +W T+I  +  +G 
Sbjct: 51  IHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQ 108

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +  F  +    +R D  T    L +CAR+  L  G+ IH +++++ L  K  L N 
Sbjct: 109 AKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANL 168

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y  CG +  ++ +F  M E+D +SWNA I+A AQ G+   A+  F+ MQ  G ++P
Sbjct: 169 LLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEG-VRP 226

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
            + T    L+ C+         +    +V + G        + +     R G+L +A+ V
Sbjct: 227 ARITLVIALTVCA----TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEV 282

Query: 648 INSQHIQARSD--NWWALFSACAAHGN--------------------------------L 673
            +     A  D  +W A+  A A HG+                                L
Sbjct: 283 FDR---AAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL 339

Query: 674 RLGRIIAGLLLEREQDKPSVYV-LLSNIYAAAGLWEEAANIRELLKR 719
           R GR+I G  LE+  D+  V    L ++Y   G  EEA   R L KR
Sbjct: 340 RFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEA---RHLFKR 383



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 31/184 (16%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +++LS+ GH + AL  F ++   H + P+  +    L ACA       G  +H
Sbjct: 496 VVSWNAIISSLSQHGHGKRALGFFRRM-DLHGVAPNQITCVAVLDACAGAAALTEGEIVH 554

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +   +G+++   VA  + S+Y     L S + +F ++                      
Sbjct: 555 DHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKV---------------------- 592

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                     +RD+ ++NAMI   ++NG     + LF  M +   R D  SF SVLS C 
Sbjct: 593 --------AVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACS 644

Query: 201 AGLL 204
            G L
Sbjct: 645 HGGL 648


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 198/592 (33%), Positives = 313/592 (52%), Gaps = 12/592 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           M  R+   + ++I    +NG     +GLF  M +     D ++  S +  C + G +  G
Sbjct: 95  MYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTG 154

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           RQ+H+   KS     + V NAL+TMY   G V D   +FE  K    D IS+  ++ G A
Sbjct: 155 RQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDK--DLISWGSIIAGFA 212

Query: 268 SVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
             G   EAL  FR+M+V  S  P+E  F S   AC        G Q+H  ++K   +   
Sbjct: 213 QQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL 272

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  +   MY+ C  +D A + F R++  D+VSWN++++ Y+   L   A++ + EM+  
Sbjct: 273 YVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDS 332

Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+RPD  T   LL +    + +    +IH+++   G+  ++ V N+L+S YA+   +  A
Sbjct: 333 GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSA 392

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +FH +  ++++TWN+++     +  P + L+ FS L  SE   D  +L+  LS+ A +
Sbjct: 393 MDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAEL 452

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNAL 559
                 KQ+H Y  K  L+    L N +I  YAKCG LD ++R+F +M   +D  SW++L
Sbjct: 453 GYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSL 512

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  YAQ G  KEA   F  M+ +G I+P+  TF  VL+ACS  G V++G   +  M  +Y
Sbjct: 513 IVGYAQFGYAKEAFDLFSRMRSLG-IRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEY 571

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G +P  +H SC++DLL RAG L EA   I+    +     W  L +A   H ++ +G+  
Sbjct: 572 GIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRA 631

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  +L  +    + YVLL NIYAA+G W E A +++ ++ +GV K PG SW+
Sbjct: 632 AEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWV 683



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 262/554 (47%), Gaps = 48/554 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   DAL LF  +  S     D ++L + + AC  L +   G Q+HA+AL++   +  
Sbjct: 112 QNGRAGDALGLFSSMLRS-GTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDL 170

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y                               +K G VD    +F+++ D+
Sbjct: 171 IVQNALVTMY-------------------------------SKNGLVDDGFMLFERIKDK 199

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN-YSFASVLSVCDA-GLLEFGRQL 210
           DL  + ++I G  + G+E   + +FREM        N + F S    C A G  E+G Q+
Sbjct: 200 DLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQI 259

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  K      + V  +L  MY  C N+  A   F   +    D +S+N +++  +  G
Sbjct: 260 HGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEA--PDLVSWNSIVNAYSVEG 317

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSN 327
            + EAL+ F +M  + LRP  +T   ++ AC+     Y    +H+  +K G +   SV N
Sbjct: 318 LLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCN 377

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + ++MY+ C  +  A  +F  ++++D+V+WN++++  AQ N     +  +  +       
Sbjct: 378 SLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSL 437

Query: 388 DEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  +  ++L++S   G+ EMV+ +HA+ F  G++ +  +SN LI  YAK   +  A ++F
Sbjct: 438 DRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF 497

Query: 445 HNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
             M + R++ +W++LI G+   G+  +    FS +    +RP+  T    L++C+R+  +
Sbjct: 498 EIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFV 557

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
             G   +  +     ++      + ++ L A+ G L  +    + M  E D I W  L++
Sbjct: 558 NEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLA 617

Query: 562 AYAQHGE---GKEA 572
           A   H +   GK A
Sbjct: 618 ASKMHNDMEMGKRA 631



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 204/450 (45%), Gaps = 59/450 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  ++ G   +AL +F ++       P+ +   +   AC  + +  +G Q+H  +++  
Sbjct: 208 IAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYR 267

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L    +V  ++  +Y   ++L S +  F  I+ PD+ SW + ++A +  G +  A  +F 
Sbjct: 268 LDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFS 327

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLL 204
           +M D  L                               R D  +   +L  C   DA  L
Sbjct: 328 EMRDSGL-------------------------------RPDGITVRGLLCACVGRDA--L 354

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR +HS + K G    VSV N+L++MY  C ++  A  VF E K    D +++N ++ 
Sbjct: 355 YHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQ--DVVTWNSILT 412

Query: 265 GLASVGRVEEALIRFRDMLVASLRPS--ELTFVSVMSACLCPRVGY-----QVHAQAMKS 317
             A     EE L  F   L+    PS   ++  +V+SA     +GY     QVHA A K+
Sbjct: 413 ACAQHNHPEEVLKLFS--LLNKSEPSLDRISLNNVLSA--SAELGYFEMVKQVHAYAFKA 468

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILA 376
           G      +SN  I  Y+ CG +D+A  +F  +   +D+ SW+++I  YAQ    + A   
Sbjct: 469 GLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDL 528

Query: 377 YLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           +  M+S+GIRP+  TF G L A S  GF+   E  + +  +    GI+   +  + ++  
Sbjct: 529 FSRMRSLGIRPNHVTFIGVLTACSRVGFVN--EGCYYYSIMEPEYGIVPTREHCSCIVDL 586

Query: 431 YAKNERIKQAYQIFHNMS-PRNIITWNTLI 459
            A+  ++ +A      M    +II W TL+
Sbjct: 587 LARAGKLTEAANFIDQMPFEPDIIMWKTLL 616



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 43/345 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S  G   +AL LF ++  S  L+PD  ++   L AC        G  +H+Y ++ GL   
Sbjct: 314 SVEGLLSEALVLFSEMRDS-GLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGD 372

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N++LS+Y    DL S   VF EI++ DV +W + L+AC +  H           P+
Sbjct: 373 VSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNH-----------PE 421

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQL 210
             L                     LF  ++K +   D  S  +VLS   + G  E  +Q+
Sbjct: 422 EVLK--------------------LFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 461

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+   K+G      + N LI  Y  CG++ DA ++F E  G   D  S++ ++ G A  G
Sbjct: 462 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFG 520

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG------YQVHAQAMKSGFEAYTS 324
             +EA   F  M    +RP+ +TF+ V++A  C RVG      Y       + G      
Sbjct: 521 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTA--CSRVGFVNEGCYYYSIMEPEYGIVPTRE 578

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
             +  + + +  GK+ EA     ++  E DI+ W T+++     N
Sbjct: 579 HCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHN 623


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 210/682 (30%), Positives = 342/682 (50%), Gaps = 43/682 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L+T ++ C  L +   G Q+ A+ + +GL  +  VAN++++++ N R +   +R+F   
Sbjct: 147 ALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLF--- 203

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                                       D+M +RD   +NAMI+  +          +  
Sbjct: 204 ----------------------------DRMEERDRISWNAMISMYSHEEVYSKCFIVLS 235

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M   +V+ D  +  S++SVC  + L+  G  +HSL   SG  C V ++NAL+ MY   G
Sbjct: 236 DMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAG 295

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVS 296
            + +A  +F        D IS+N M+          EAL     +L      P+ +TF S
Sbjct: 296 KLDEAESLFRNMSRR--DVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSS 353

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            + AC  P     G  +HA  ++   +    + N+ +TMYS C  +++   +F  +   D
Sbjct: 354 ALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYD 413

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEM-IH 409
           +VS N +   YA      +A+  +  M+  GI+P+  T  +L     S G +    M +H
Sbjct: 414 VVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A+V   G++++  ++N+LI+ YA    ++ +  IF  ++ +++I+WN +I   + +G   
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + ++ F +   +  + D + L+  LSS A ++SL  G Q+HG  +KN L     + NA +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y KCG +DC L+       + T  WN LIS YA++G  KEA   FK M  VG+ KPD 
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQ-KPDY 652

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF A+LSACSHAGL+D G   ++SM   +G  P   H  C++DLLGR G   EAE+ I+
Sbjct: 653 VTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFID 712

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
              +      W +L S+   H NL +GR  A  LLE +    S YVLLSN+YA    W +
Sbjct: 713 EMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVD 772

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
              +R  +K   + K+P CSW+
Sbjct: 773 VDKLRSHMKTIKLNKRPACSWL 794



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 162/597 (27%), Positives = 289/597 (48%), Gaps = 47/597 (7%)

Query: 58  YSLSTTLAACANL---RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           ++L++ + AC +      AA G  +HA   RAGL    ++   +L LY +   +++ +R+
Sbjct: 42  FALASLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRL 101

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+   +V SWT                               A++   + NG  +  +
Sbjct: 102 FWEMPQRNVVSWT-------------------------------AIMVALSSNGCMEEAL 130

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMY 233
             +R M K  V  +  + A+V+S+C A   E  G Q+ + V  SG    VSV N+LITM+
Sbjct: 131 VAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMF 190

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            N   V DA ++F+  +    D IS+N M+   +      +  I   DM    ++P   T
Sbjct: 191 GNLRRVQDAERLFDRMEER--DRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTT 248

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S++S C       +G  +H+  + SG      + NA + MYS+ GK+DEA  +F  + 
Sbjct: 249 LCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMS 308

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLASSGFIEMV---E 406
            +D++SWNTMIS+Y Q N    A+    + +Q+    P+  TF S L +    E +    
Sbjct: 309 RRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGR 368

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IHA +    +   + + N+L++ Y+K   ++   ++F +M   ++++ N L  G+    
Sbjct: 369 TIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALE 428

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMSLG 525
                ++ FS +  + ++P+  T+     +C  +  L  +G  +H YV +  L+S   + 
Sbjct: 429 DVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYIT 488

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N++IT+YA CGDL+ S  +F+ +  K  ISWNA+I+A  +HG G+EA+  F   Q  G  
Sbjct: 489 NSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGN- 547

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           K D+      LS+ ++   +++G ++    V + G       ++  +D+ G+ G +D
Sbjct: 548 KLDRFCLAECLSSSANLASLEEGMQLHGLSVKN-GLDCDSHVVNATMDMYGKCGKMD 603



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 275/537 (51%), Gaps = 21/537 (3%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE-- 205
           MP R    +   ++GC   G E     L R M + DV    ++ AS+++ C+  G  E  
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60

Query: 206 -FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G  +H+L  ++G    V +  AL+ +Y + G V++A ++F E      + +S+  +M 
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQR--NVVSWTAIMV 118

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
            L+S G +EEAL+ +R M    +  +     +V+S C        G QV A  + SG   
Sbjct: 119 ALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLT 178

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
           + SV+N+ ITM+ +  ++ +A  +F R++E+D +SWN MIS Y+   +     +   +M+
Sbjct: 179 HVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              ++PD  T  SL+   ASS  + +   IH+    +G+  ++ + NAL++ Y+   ++ 
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLD 298

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSC 497
           +A  +F NMS R++I+WNT+I+ ++ +   V+ L+   +LL + E  P+  T S AL +C
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           +   +L +G+ IH  +L+ +L + + +GN+++T+Y+KC  ++ + RVF  M   D +S N
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCN 418

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            L   YA   +   A+  F  M+  G IKP+  T   +   C   G +        + V 
Sbjct: 419 VLTGGYAALEDVANAMRVFSWMRGTG-IKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHG 671
             G +  E   + ++ +    G L+ +  +   IN++ + +    W A+ +A   HG
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVIS----WNAIIAANVRHG 530



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 213/463 (46%), Gaps = 40/463 (8%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++KPD+ +L + ++ CA+    A G+ +H+  + +GL     + N ++++Y  A  L   
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEA 300

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + +F  +   DV SW T +S+  +      A E   ++   D    N+M           
Sbjct: 301 ESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSM----------- 349

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALI 230
                              +F+S L  C +   L  GR +H+++ +     ++ + N+L+
Sbjct: 350 -------------------TFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLL 390

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TMY  C ++ D  +VFE    Y  D +S NV+  G A++  V  A+  F  M    ++P+
Sbjct: 391 TMYSKCNSMEDTERVFESMPCY--DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPN 448

Query: 291 ELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            +T +++   C         G  +HA   ++G  +   ++N+ ITMY++CG ++ +  IF
Sbjct: 449 YITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIF 508

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +R+  K ++SWN +I+   +   G  AI  +++ Q  G + D F     L+SS  +  +E
Sbjct: 509 SRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLE 568

Query: 407 ---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +H     NG+  +  V NA +  Y K  ++    +   + + R    WNTLI+G+ 
Sbjct: 569 EGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYA 628

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
             G+  +    F  ++    +PD  T    LS+C+    +  G
Sbjct: 629 RYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKG 671



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 43/456 (9%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N S+  ++  N  +++  +S    +AL    Q+  + +  P+  + S+ L AC++     
Sbjct: 306 NMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALM 365

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +HA  L+  L+    + N++L++Y     +   +RVF  +   DV S         
Sbjct: 366 NGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYA 425

Query: 135 KMGHVDYACEVFDKMPDRDL-PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            +  V  A  VF  M    + P Y  MI    +   + +G     ++H            
Sbjct: 426 ALEDVANAMRVFSWMRGTGIKPNYITMIN--LQGTCKSLG-----DLHS----------- 467

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
                       +G  LH+ VT++G      + N+LITMY  CG++  +  +F       
Sbjct: 468 ------------YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKS 515

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
              IS+N ++      GR EEA+  F D   A  +         +S+         G Q+
Sbjct: 516 V--ISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQL 573

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  ++K+G +  + V NA + MY  CGK+D           +    WNT+IS YA+    
Sbjct: 574 HGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYF 633

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNA 426
           + A   +  M SVG +PD  TF +LL++   +G I+  ++  ++     G+   I+    
Sbjct: 634 KEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVC 693

Query: 427 LISAYAKNERIKQAYQIFHNMS--PRNIITWNTLIN 460
           ++    +  +  +A +    M   P ++I W +L++
Sbjct: 694 IVDLLGRLGKFAEAEKFIDEMPVLPNDLI-WRSLLS 728



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 164/348 (47%), Gaps = 19/348 (5%)

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVE---MIH 409
           SW T +S  A+  L  +A      M+   +    F   SL+ +    G+ E       IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A     G++ N+ +  AL+  Y     +  A ++F  M  RN+++W  ++     NG   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  +  +    +  +   L+  +S C  +     G Q+  +V+ + L++ +S+ N++I
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS-CFKAMQDV--GRIK 586
           T++     +  + R+F+ M E+D ISWNA+IS Y+     +E  S CF  + D+  G +K
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSH----EEVYSKCFIVLSDMRHGEVK 243

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  T  +++S C+ + LV  G+ I  S+    G   +   ++ ++++   AG LDEAE 
Sbjct: 244 PDVTTLCSLVSVCASSDLVALGSGIH-SLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 647 VINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           +  +    +R D  +W  + S+     +        G LL+ ++  P+
Sbjct: 303 LFRN---MSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 194/611 (31%), Positives = 323/611 (52%), Gaps = 15/611 (2%)

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           A +K   +D AC +FD+M  R+   +  +I G  ENG    G   F EM    +  D ++
Sbjct: 114 AYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFA 173

Query: 192 FASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           ++ +L +C  GL  +E G  +H+ +   GF+    V  AL+ MY     + D+ KVF   
Sbjct: 174 YSGILQIC-IGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTM 232

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
                + +S+N M+ G  S     +A   F  M+   + P   TF+ V  A    R    
Sbjct: 233 TE--VNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNK 290

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTY 364
             +V   A++ G ++ T V  A I M S CG + EA  IF    +  +    WN MIS Y
Sbjct: 291 AKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGY 350

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITN- 420
            +      A+  + +M    I  D +T+ S+   +A+   + + + +HA    +G+  N 
Sbjct: 351 LRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNY 410

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + +SNA+ +AYAK   ++   ++F+ M  R++I+W +L+  +       + ++ FS +  
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             + P+++T S  L SCA +  L +G+Q+HG + K  L     + +A++ +YAKCG L  
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + +VFN +   DT+SW A+I+ +AQHG   +A+  F+ M  +G ++P+  TF  VL ACS
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG-VEPNAVTFLCVLFACS 589

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H GLV++G + F  M   YG +P  +H +C++DLL R G+L++A   I+   ++     W
Sbjct: 590 HGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVW 649

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
             L  AC  HGN+ LG + A  +L  + +  + YVLLSN Y  +G +++  ++R ++K  
Sbjct: 650 QTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQ 709

Query: 721 GVIKQPGCSWI 731
           GV K+PGCSWI
Sbjct: 710 GVKKEPGCSWI 720



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 141/555 (25%), Positives = 255/555 (45%), Gaps = 52/555 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A L+ +G + D    F ++ S   + PD ++ S  L  C  L +   GN +HA  +  G
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQS-QGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRG 201

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             ++  V+  +L++Y   +++    +VF+ +   +V SW                     
Sbjct: 202 FTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSW--------------------- 240

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                     NAMITG T N        LF  M    V  D  +F  V      G+L   
Sbjct: 241 ----------NAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKA--IGML--- 285

Query: 208 RQLHSLVTKSGFSCLVSVVN------ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           R ++     SG++  + V +      ALI M   CG++ +A  +F         +  +N 
Sbjct: 286 RDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNA 345

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSG 318
           M+ G    G  E+AL  F  M    +     T+ SV   ++A  C  +G +VHA+A+KSG
Sbjct: 346 MISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSG 405

Query: 319 FEA-YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
            E  Y S+SNA    Y+ CG +++   +F R++++D++SW ++++ Y+Q +    AI  +
Sbjct: 406 LEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIF 465

Query: 378 LEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             M++ GI P++FTF S+L S      +E  + +H  +   G+  +  + +AL+  YAK 
Sbjct: 466 SNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKC 525

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +  A ++F+ +S  + ++W  +I G   +G     LQ F  ++   + P+  T    L
Sbjct: 526 GCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVL 585

Query: 495 SSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKD 552
            +C+    +  G Q    + K   L+ +M     ++ L ++ G L+ ++   + M +E +
Sbjct: 586 FACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPN 645

Query: 553 TISWNALISAYAQHG 567
            + W  L+ A   HG
Sbjct: 646 EMVWQTLLGACRVHG 660



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 12/267 (4%)

Query: 401 FIEMVEMIHAFVFINGIITN--IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           F++  + +H F+  +    +  + + N +  AY+K   I  A ++F  MS RN  +W  L
Sbjct: 83  FLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVL 142

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I G   NG  + G + F E+    + PD++  S  L  C  + S+  G  +H  ++    
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGF 202

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S   +  A++ +YAK  +++ S +VFN M E + +SWNA+I+ +  +    +A   F  
Sbjct: 203 TSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR 262

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDL 634
           M   G + PD  TF  V  A    G++ D  +  +  V+ Y      D      + ++D+
Sbjct: 263 MMGEG-VTPDAQTFIGVAKA---IGMLRDVNKAKE--VSGYALELGVDSNTLVGTALIDM 316

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWW 661
             + G L EA  + NS  I  R +  W
Sbjct: 317 NSKCGSLQEARSIFNSHFITCRFNAPW 343


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 199/648 (30%), Positives = 338/648 (52%), Gaps = 52/648 (8%)

Query: 95  ANTILS-LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +N +LS L KN R +   +++F ++   D Y+W   +SA   +G++  A ++F++ P  +
Sbjct: 40  SNQLLSELSKNGR-VDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFNETPIXN 98

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
              ++++++G  +NG E  G+  F +M     +   Y+  SVL  C    LL  G+ +H 
Sbjct: 99  SITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHC 158

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEAKGYVCDHISYNVMMDGLASV 269
              K      + V   L+ MY  C  +++A  +F    + K YV     +  M+ G A  
Sbjct: 159 YAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYV----QWTAMLTGYAQN 214

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
           G   +A+  F++M    +  +  TF S+++AC        G QVH   + SGF     V 
Sbjct: 215 GESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQ 274

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A + MY+ CG +  A MI   ++  D+V WN+MI           A++ + +M +  IR
Sbjct: 275 SALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIR 334

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D+FT+ S+L   AS   +++ E +H+     G      VSNAL+  YAK   +  A  +
Sbjct: 335 IDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDV 394

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F+ +  +++I+W +L+ G++ NGF  + LQ F ++  + +  D++ ++   S+CA ++ +
Sbjct: 395 FNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVI 454

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+Q+H   +K++  S +S  N++IT+YAKCG L+ ++RV + M  ++ ISW A+I  Y
Sbjct: 455 EFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGY 514

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           AQ+G  +   S F++M+ V  IKP                                    
Sbjct: 515 AQNGLVETGQSYFESMEKVYGIKP------------------------------------ 538

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
           A D  +CM+DLLGRAG ++EAE ++N   ++  +  W +L SAC  HGNL LG      L
Sbjct: 539 ASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNL 598

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++ E      YVLLSN+++ AG WE+AA+IR  +K  G+ ++PG SWI
Sbjct: 599 IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWI 646



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 148/593 (24%), Positives = 278/593 (46%), Gaps = 81/593 (13%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   + L  F Q+ S  + KP  Y+L + L AC+ L     G  +H YA++  L+A  
Sbjct: 111 KNGCEVEGLRQFSQMWSDGQ-KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANI 169

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA  ++ +Y                            S C  +   +Y   +F  +PDR
Sbjct: 170 FVATGLVDMY----------------------------SKCKCLLEAEY---LFFSLPDR 198

Query: 153 DLPV-YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
              V + AM+TG  +NG     I  F+EM    +  ++++F S+L+ C +     FGRQ+
Sbjct: 199 KNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQV 258

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  +  SGF   V V +AL+ MY  CG++  A  + +  +  + D + +N M+ G  + G
Sbjct: 259 HGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTME--IDDVVCWNSMIVGCVTHG 316

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
            +EEAL+ F  M    +R  + T+ SV   +++C   ++G  VH+  +K+GF+A  +VSN
Sbjct: 317 YMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSN 376

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+  G +  A  +F ++ +KD++SW ++++ Y        A+  + +M++  +  
Sbjct: 377 ALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDL 436

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+F    + ++   + ++E    +HA    +   + +   N+LI+ YAK   ++ A ++ 
Sbjct: 437 DQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVX 496

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            +M  RN+I+W  +I G+  NG    G  +F  +                          
Sbjct: 497 DSMETRNVISWTAIIVGYAQNGLVETGQSYFESM-------------------------- 530

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAY 563
             ++++G    ++  +       MI L  + G ++ +  + N M +E D   W +L+SA 
Sbjct: 531 --EKVYGIKPASDRYA------CMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSAC 582

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
             HG  +      +A +++ +++P  +    +LS   S AG  +D   I  +M
Sbjct: 583 RVHGNLELGE---RAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAM 632



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 177/387 (45%), Gaps = 42/387 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   +++G    A+  F ++ +   ++ + ++  + L AC ++   AFG Q+H   + +G
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRN-QGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSG 266

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V + ++ +Y    DL S + +   ++  DV  W + +  C   G+++ A  +F 
Sbjct: 267 FGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFH 326

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
           KM +R                               D+R D++++ SVL S+     L+ 
Sbjct: 327 KMHNR-------------------------------DIRIDDFTYPSVLKSLASCKNLKI 355

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +HSL  K+GF    +V NAL+ MY   GN+  A  VF +      D IS+  ++ G 
Sbjct: 356 GESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDK--DVISWTSLVTGY 413

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
              G  E+AL  F DM  A +   +     V SAC        G QVHA  +KS   +  
Sbjct: 414 VHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLL 473

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S  N+ ITMY+ CG +++A  +   ++ ++++SW  +I  YAQ  L  +    +  M+ V
Sbjct: 474 SAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKV 533

Query: 384 -GIRPDEFTFG---SLLASSGFIEMVE 406
            GI+P    +     LL  +G I   E
Sbjct: 534 YGIKPASDRYACMIDLLGRAGKINEAE 560


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Glycine max]
          Length = 1033

 Score =  332 bits (851), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 200/630 (31%), Positives = 337/630 (53%), Gaps = 28/630 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+Y  +  +S   + G +D A  +F++M DR+    N ++ G       +    +F+EM 
Sbjct: 284 DLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK 343

Query: 182 KLDVRRDNYSFASVLSVCDAGLLEF---------GRQLHSLVTKSGF-SCLVSVVNALIT 231
            L V  +  S+A +LS       EF         G+++H+ + ++      + + NAL+ 
Sbjct: 344 DL-VEINASSYAVLLS----AFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVN 398

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           +Y  C  + +A  +F+       D +S+N ++ GL    R EEA+  F  M    + PS+
Sbjct: 399 LYAKCNAIDNARSIFQLMPSK--DTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSK 456

Query: 292 LTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            + +S +S+C       +G Q+H + +K G +   SVSNA +T+Y+    ++E   +F  
Sbjct: 457 FSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFL 516

Query: 349 LQEKDIVSWNTMISTYAQRNLG-RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-- 405
           + E D VSWN+ I   A        AI  +LEM   G +P+  TF ++L++   + ++  
Sbjct: 517 MPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLEL 576

Query: 406 -EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFL 463
              IHA +  + +  +  + N L++ Y K E+++    IF  MS R + ++WN +I+G++
Sbjct: 577 GRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI 636

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NG   + +     ++    R D++TL+  LS+CA +++L  G ++H   ++  L +++ 
Sbjct: 637 HNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVV 696

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +G+A++ +YAKCG +D + R F +M  ++  SWN++IS YA+HG G +A+  F  M+  G
Sbjct: 697 VGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHG 756

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           ++ PD  TF  VLSACSH GLVD+G   F SM   Y   P  +H SCM+DLLGRAG + +
Sbjct: 757 QL-PDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKK 815

Query: 644 AERVINSQHIQARSDNWWALFSAC--AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
            E  I +  +   +  W  +  AC  A   N  LGR  A +L+E E      YVLLSN++
Sbjct: 816 LEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMH 875

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AA G WE+    R  ++   V K+ GCSW+
Sbjct: 876 AAGGKWEDVEEARLAMRNAEVKKEAGCSWV 905



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/434 (31%), Positives = 229/434 (52%), Gaps = 28/434 (6%)

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D+  +E   QLH  + K+G +  V   N L+ ++   GN+V A K+F+E      + +S+
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQK--NLVSW 108

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCP---RVGYQVHAQA 314
           + ++ G A  G  +EA + FR ++ A L P+     S + AC  L P   ++G ++H   
Sbjct: 109 SCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLI 168

Query: 315 MKSGFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            KS + +   +SN  ++MYS C   ID+A  +F  ++ K   SWN++IS Y +R    SA
Sbjct: 169 SKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISA 228

Query: 374 ILAYLEMQ----SVGIRPDEFTFGSL------LASSGFIEMVEMIHAFVFINGIITNIQV 423
              +  MQ     +  RP+E+TF SL      L   G + ++E + A +  +  + ++ V
Sbjct: 229 FKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCG-LTLLEQMLARIEKSSFVKDLYV 287

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSE 482
            +AL+S +A+   I  A  IF  M  RN +T N L+ G        +  + F E+  + E
Sbjct: 288 GSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVE 347

Query: 483 LRPDEYTLSVALSSCARISSLRHGK----QIHGYVLKNNLISKMSL-GNAMITLYAKCGD 537
           +    Y  +V LS+    S+L+ GK    ++H Y+++N L+    L GNA++ LYAKC  
Sbjct: 348 INASSY--AVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNA 405

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D +  +F +M  KDT+SWN++IS    +   +EAV+CF  M+  G + P + +  + LS
Sbjct: 406 IDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV-PSKFSVISTLS 464

Query: 598 ACSHAGLVDDGTRI 611
           +C+  G +  G +I
Sbjct: 465 SCASLGWIMLGQQI 478



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 173/678 (25%), Positives = 323/678 (47%), Gaps = 68/678 (10%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
            +QLH    + GL +     NT+++++  A +LVS +++F E+   ++ SW+  +S    
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS---- 113

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                                      G  +NG  D    LFR +    +  ++Y+  S 
Sbjct: 114 ---------------------------GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSA 146

Query: 196 LSVCD---AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC-GNVVDACKVFEEAKG 251
           L  C      +L+ G ++H L++KS ++  + + N L++MY +C  ++ DA +VFEE K 
Sbjct: 147 LRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIK- 205

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRF----RDMLVASLRPSELTFVSVMS-ACLCPRV 306
            +    S+N ++      G    A   F    R+    + RP+E TF S+++ AC     
Sbjct: 206 -MKTSASWNSIISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDC 264

Query: 307 GY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           G     Q+ A+  KS F     V +A ++ ++  G ID A MIF ++ +++ V+ N ++ 
Sbjct: 265 GLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMV 324

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAFVF 413
             A+++ G  A   + EM+ + +  +  ++  LL  S F E   +         +HA++ 
Sbjct: 325 GLARQHQGEEAAKIFKEMKDL-VEINASSYAVLL--SAFTEFSNLKEGKRKGQEVHAYLI 381

Query: 414 INGII-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            N ++   I + NAL++ YAK   I  A  IF  M  ++ ++WN++I+G   N    + +
Sbjct: 382 RNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAV 441

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F  +  + + P ++++   LSSCA +  +  G+QIHG  +K  L   +S+ NA++TLY
Sbjct: 442 ACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLY 501

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYA-QHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           A+   ++   +VF +M E D +SWN+ I A A       +A+  F  M   G  KP++ T
Sbjct: 502 AETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAG-WKPNRVT 560

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F  +LSA S   L++ G +I  +++  +         + +L   G+   +++ E + +  
Sbjct: 561 FINILSAVSSLSLLELGRQI-HALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRM 619

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ--DKPSVYVLLSNIYAAA----G 705
             +    +W A+ S    +G L     +  L++++ Q  D  ++  +LS   + A    G
Sbjct: 620 SERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERG 679

Query: 706 LWEEAANIRELLKRTGVI 723
           +   A  IR  L+   V+
Sbjct: 680 MEVHACAIRACLEAEVVV 697



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 36/386 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L  +  +++A+  F  +  +  + P  +S+ +TL++CA+L     G Q+H   +
Sbjct: 425 NSIISGLDHNERFEEAVACFHTMRRN-GMVPSKFSVISTLSSCASLGWIMLGQQIHGEGI 483

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     V+N +L+LY     +   ++VF  +   D  SW +F+ A            
Sbjct: 484 KCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGA------------ 531

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGL 203
               +   +  V  A              I  F EM +   + +  +F ++  +V    L
Sbjct: 532 ----LATSEASVLQA--------------IKYFLEMMQAGWKPNRVTFINILSAVSSLSL 573

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GRQ+H+L+ K   +   ++ N L+  Y  C  + D C++         D +S+N M+
Sbjct: 574 LELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMED-CEIIFSRMSERRDEVSWNAMI 632

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G    G + +A+     M+    R  + T  +V+SAC        G +VHA A+++  E
Sbjct: 633 SGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLE 692

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           A   V +A + MY+ CGKID A   F  +  ++I SWN+MIS YA+   G  A+  + +M
Sbjct: 693 AEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQM 752

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE 406
           +  G  PD  TF  +L++   + +V+
Sbjct: 753 KQHGQLPDHVTFVGVLSACSHVGLVD 778



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 132/256 (51%), Gaps = 13/256 (5%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +E    +H  ++  G+ +++   N L++ + +   +  A ++F  M  +N+++W+ L++G
Sbjct: 55  VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS--LRHGKQIHGYVLKNNLI 519
           +  NG P +    F  ++ + L P+ Y +  AL +C  +    L+ G +IHG + K+   
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174

Query: 520 SKMSLGNAMITLYAKC-GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           S M L N ++++Y+ C   +D + RVF  +  K + SWN++IS Y + G+   A   F +
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234

Query: 579 MQDVG---RIKPDQATFTAVLS-ACSHAGLVDDGTRIFDSM---VNDYGFIPAEDHLSCM 631
           MQ        +P++ TF ++++ ACS   LVD G  + + M   +    F+      S +
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSAL 291

Query: 632 LDLLGRAGYLDEAERV 647
           +    R G +D A+ +
Sbjct: 292 VSGFARYGLIDSAKMI 307



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 7/143 (4%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++L+T L+ACA++     G ++HA A+RA L+A   V + ++ +Y     +    R F
Sbjct: 659 DDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFF 718

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLP---VYNAMITGCTENGYED 171
             +   ++YSW + +S   + GH   A ++F +M     LP    +  +++ C+  G  D
Sbjct: 719 ELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVD 778

Query: 172 IGIGLFR---EMHKLDVRRDNYS 191
            G   F+   E+++L  R +++S
Sbjct: 779 EGFEHFKSMGEVYELAPRIEHFS 801


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 199/610 (32%), Positives = 319/610 (52%), Gaps = 20/610 (3%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR--RDNYSFAS 194
           GH+ YA ++FD+MP   L  YN +I     +G     I +F  M    ++   D Y++  
Sbjct: 63  GHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPF 122

Query: 195 VLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           V     AG L+    G  +H  + +S F     V NAL+ MY N G V  A  VF+  K 
Sbjct: 123 VAKA--AGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKN 180

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGY 308
              D IS+N M+ G    G + +AL+ F  M+   + P   T VS++  C   +   +G 
Sbjct: 181 R--DVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGR 238

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
            VH    +        V NA + MY  CG++DEA  +F R++ +D+++W  MI+ Y +  
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDG 298

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSN 425
              +A+     MQ  G+RP+  T  SL+++ G    +   + +H +     + ++I +  
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIET 358

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LIS YAK + I   +++F   S  +   W+ +I G + N      L  F  +   ++ P
Sbjct: 359 SLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEP 418

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  TL+  L + A ++ LR    IH Y+ K   +S +     ++ +Y+KCG L+ + ++F
Sbjct: 419 NIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478

Query: 546 NMMIEK----DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           N + EK    D + W ALIS Y  HG+G  A+  F  M   G + P++ TFT+ L+ACSH
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG-VTPNEITFTSALNACSH 537

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           +GLV++G  +F  M+  Y  +   +H +C++DLLGRAG LDEA  +I +   +  S  W 
Sbjct: 538 SGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWG 597

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL +AC  H N++LG + A  L E E +    YVLL+NIYAA G W++   +R +++  G
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVG 657

Query: 722 VIKQPGCSWI 731
           + K+PG S I
Sbjct: 658 LRKKPGHSTI 667



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/560 (26%), Positives = 261/560 (46%), Gaps = 47/560 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
           LL  NI +    R G Y DA+++F+++ S   K  PD Y+      A   L++ + G  +
Sbjct: 80  LLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVI 139

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   LR+      +V N +L++Y N                                G V
Sbjct: 140 HGRILRSWFGMDKYVQNALLAMYMN-------------------------------FGRV 168

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           + A  VFD M +RD+  +N MI+G   NGY +  + +F  M    V  D+ +  S+L VC
Sbjct: 169 EMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVC 228

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                LE GR +H LV +      + V NAL+ MY  CG + +A  VF   +    D I+
Sbjct: 229 GHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERR--DVIT 286

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +  M++G    G VE AL   R M    +RP+ +T  S++SAC   L    G  +H  A+
Sbjct: 287 WTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAI 346

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +    +   +  + I+MY+ C  ID    +F+         W+ +I+   Q  L R A+ 
Sbjct: 347 RQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALD 406

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  M+   + P+  T  SLL   A+   +     IH ++   G ++++  +  L+  Y+
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYS 466

Query: 433 KNERIKQAYQIFHNM----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           K   ++ A++IF+ +      ++++ W  LI+G+ ++G     LQ F E++ S + P+E 
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T + AL++C+    +  G  +  ++L++   +++ +    ++ L  + G LD +  +   
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586

Query: 548 M-IEKDTISWNALISAYAQH 566
           +  E  +  W AL++A   H
Sbjct: 587 IPFEPTSTIWGALLAACVTH 606



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 232/460 (50%), Gaps = 17/460 (3%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           +++ L   Y  CG++  A K+F+E        +SYN+++      G   +A+  F  M+ 
Sbjct: 51  ILSTLSVTYALCGHIAYARKLFDEMPQ--SSLLSYNIVIRMYVRDGLYHDAINVFIRMVS 108

Query: 285 ASLR--PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
             ++  P   T+  V  A        +G  +H + ++S F     V NA + MY + G++
Sbjct: 109 EGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRV 168

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           + A  +F  ++ +D++SWNTMIS Y +      A++ +  M + G+ PD  T  S+L   
Sbjct: 169 EMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVC 228

Query: 400 GFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G ++ +EM   +H  V    +   I+V NAL++ Y K  R+ +A  +F  M  R++ITW 
Sbjct: 229 GHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWT 288

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +ING++ +G     L+    +    +RP+  T++  +S+C     L  GK +HG+ ++ 
Sbjct: 289 CMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQ 348

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            + S + +  ++I++YAKC  +D   RVF+      T  W+A+I+   Q+   ++A+  F
Sbjct: 349 KVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLF 408

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVD-DGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           K M+    ++P+ AT  ++L A  +A L D   T      +   GF+ + D  + ++ + 
Sbjct: 409 KRMRRED-VEPNIATLNSLLPA--YATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVY 465

Query: 636 GRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGN 672
            + G L+ A ++ N    + +S +   W AL S    HG+
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 210/428 (49%), Gaps = 26/428 (6%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +  G  +   +S  ++T Y+ CG I  A  +F  + +  ++S+N +I  Y +  L
Sbjct: 37  LHCHVITGGRVSGHILSTLSVT-YALCGHIAYARKLFDEMPQSSLLSYNIVIRMYVRDGL 95

Query: 370 GRSAILAYLEMQSVGIR--PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVS 424
              AI  ++ M S GI+  PD +T+  +  ++G ++ + +   IH  +  +    +  V 
Sbjct: 96  YHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQ 155

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL++ Y    R++ A  +F  M  R++I+WNT+I+G+  NG+    L  F  ++   + 
Sbjct: 156 NALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVD 215

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD  T+   L  C  +  L  G+ +H  V +  L  K+ + NA++ +Y KCG +D +  V
Sbjct: 216 PDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  M  +D I+W  +I+ Y + G+ + A+   + MQ  G ++P+  T  +++SAC  A  
Sbjct: 276 FGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEG-VRPNAVTIASLVSACGDALK 334

Query: 605 VDDGT-----RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           ++DG       I   + +D   I  E   + ++ +  +  ++D   RV +    +  +  
Sbjct: 335 LNDGKCLHGWAIRQKVCSD---IIIE---TSLISMYAKCKHIDLCFRVFSGAS-RNHTGP 387

Query: 660 WWALFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVLLSNIYAAAGLWE--EAANIRE 715
           W A+ + C  +    L R    L   + RE  +P++  L S + A A L +  +  NI  
Sbjct: 388 WSAIIAGCVQN---ELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHC 444

Query: 716 LLKRTGVI 723
            L +TG +
Sbjct: 445 YLTKTGFM 452


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 210/664 (31%), Positives = 338/664 (50%), Gaps = 72/664 (10%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G    A  V +++       +N ++    + G+ D  IG+   M +   + D+++    L
Sbjct: 97  GATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYAL 156

Query: 197 SVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYV 253
             C   L  +  GR LH L+  +GF   V V NAL+ MY  CG++ DA  VF+E  +  +
Sbjct: 157 KAC-GELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGI 215

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLV------ASLRPSELTFVSVMSACLC---- 303
            D IS+N ++           AL  F +M +       + R   ++ V+++ AC      
Sbjct: 216 DDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL 275

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM--- 360
           P++  ++H+ A+++G  A   V NA I  Y+ CG +++A  +F  ++ KD+VSWN M   
Sbjct: 276 PQIK-EIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTG 334

Query: 361 --------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPD 388
                                           I+ YAQR   + A+ A+ +M   G  P+
Sbjct: 335 YTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPN 394

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT------------NIQVSNALISAYAK 433
             T  SLL   AS G +     IHA+     +++            ++ V NALI  Y+K
Sbjct: 395 SVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSK 454

Query: 434 NERIKQAYQIFHNMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYT 489
               K A  IF ++    RN++TW  +I G+   G     L+ FSE++     + P+ YT
Sbjct: 455 CRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYT 514

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +S  L +CA +++LR GKQIH YV +++    S   + N +I +Y+KCGD+D +  VF+ 
Sbjct: 515 ISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDS 574

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M +++ +SW +++S Y  HG GKEA+  F  MQ  G + PD  +F  +L ACSH+G+VD 
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV-PDDISFLVLLYACSHSGMVDQ 633

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   FD M  DY  + + +H +C++DLL R G LD+A + I    ++  +  W AL SAC
Sbjct: 634 GLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSAC 693

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H N+ L       L+  + +    Y L+SNIYA A  W++ A IR+L+K++G+ K+PG
Sbjct: 694 RVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPG 753

Query: 728 CSWI 731
           CSW+
Sbjct: 754 CSWV 757



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 143/576 (24%), Positives = 247/576 (42%), Gaps = 88/576 (15%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           KPD ++L   L AC  L +   G  LH      G ++   V N ++++Y     L     
Sbjct: 146 KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASL 205

Query: 114 VFSEIQNP---DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           VF EI      DV SW + ++A  K  +   A E+F +M         +MI         
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM---------SMIV-------- 248

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
                        + R D  S  ++L  C +   L   +++HS   ++G      V NAL
Sbjct: 249 --------HEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNAL 300

Query: 230 ITMYFNCGNVVDACKVFEEAK------------GYV---------------------CDH 256
           I  Y  CG++ DA KVF   +            GY                       D 
Sbjct: 301 IDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDV 360

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           I+++ ++ G A  G  +EAL  F+ M++    P+ +T +S++SAC        G ++HA 
Sbjct: 361 ITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAY 420

Query: 314 AMKSGFEAYTS------------VSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNT 359
           ++K    +  +            V NA I MYS C     A  IF  +  +E+++V+W  
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTV 480

Query: 360 MISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           MI  YAQ      A+  + EM  +   + P+ +T   +L +   +  + M   IHA+V  
Sbjct: 481 MIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTR 540

Query: 415 NGII--TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           +     +   V+N LI  Y+K   +  A  +F +M  RN ++W ++++G+ ++G   + L
Sbjct: 541 HHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F ++  +   PD+ +  V L +C+    +  G      + ++ ++++       +I L
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDL 660

Query: 532 YAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQH 566
            A+CG LD + +    M +E   + W AL+SA   H
Sbjct: 661 LARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVH 696



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 14/266 (5%)

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           ++   +   ++++Y      K A  +   ++P   + WN L+   +  G   + +     
Sbjct: 80  VSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCR 139

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L +  +PD +TL  AL +C  + S   G+ +HG +  N   S + + NA++ +Y++CG 
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGS 199

Query: 538 LDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAM-----QDVGRIKPDQ 589
           L+ +  VF+ +  K   D ISWN++++A+ +    + A+  F  M     +     + D 
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC--MLDLLGRAGYLDEAERV 647
            +   +L AC+    +     I    + +  F    D   C  ++D   + G +++A +V
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTF---ADAFVCNALIDTYAKCGSMNDAVKV 316

Query: 648 INSQHIQARSDNWWALFSACAAHGNL 673
            N    +    +W A+ +     GN 
Sbjct: 317 FNVMEFKDVV-SWNAMVTGYTQSGNF 341



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 17/179 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           ++   + +   ++ G   DAL +F + I   + + P+ Y++S  L ACA+L     G Q+
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQI 534

Query: 80  HAYALRAG--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           HAY  R      +   VAN ++ +Y    D+ + + VF  +   +  SWT+ +S     G
Sbjct: 535 HAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 138 HVDYACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
               A ++FDKM      PD D+  +  ++  C+ +G  D G+  F      D+ R +Y
Sbjct: 595 RGKEALDIFDKMQKAGFVPD-DIS-FLVLLYACSHSGMVDQGLNYF------DIMRRDY 645


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  332 bits (850), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 186/530 (35%), Positives = 289/530 (54%), Gaps = 9/530 (1%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H+ + + G      ++N ++   FN GN   + ++ ++ K    +   +N M+ GL 
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEP--NIFLFNTMIRGLV 84

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
                +E++  +  M    L P   TF  V+ AC   L   +G ++H+  +K+G EA   
Sbjct: 85  LNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAF 144

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V  + I +Y+ CG ID A  +F  + +K+  SW   IS Y      R AI  +  +  +G
Sbjct: 145 VKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204

Query: 385 IRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +RPD F+   +L++   +G +   E I  ++  NG++ N+ V+ AL+  Y K   +++A 
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERAR 264

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  M  +NI++W+++I G+  NG P + L  F ++L   L+PD Y +   L SCAR+ 
Sbjct: 265 SVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLG 324

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  G      +  N  +    LG A+I +YAKCG +D +  VF  M +KD + WNA IS
Sbjct: 325 ALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAIS 384

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
             A  G  K+A+  F  M+  G IKPD+ TF  +L AC+HAGLV++G R F+SM   +  
Sbjct: 385 GLAMSGHVKDALGLFGQMEKSG-IKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTL 443

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H  CM+DLLGRAG LDEA ++I S  ++A +  W AL   C  H + +L  ++  
Sbjct: 444 TPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLK 503

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L+  E      YVLLSNIYAA+  WEEAA IR ++   GV K PG SWI
Sbjct: 504 KLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWI 553



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 216/456 (47%), Gaps = 11/456 (2%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D Y     L      G+ +Y+  + D+  + ++ ++N MI G   N      I ++  
Sbjct: 39  DEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHS 98

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M K  +  D+++F  VL  C   L  E G ++HSLV K+G      V  +LI +Y  CG 
Sbjct: 99  MRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGF 158

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + +A KVF++      +  S+   + G   VG+  EA+  FR +L   LRP   + V V+
Sbjct: 159 IDNAFKVFDDIPDK--NFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVL 216

Query: 299 SACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           SAC      R G  +     ++G      V+ A +  Y  CG ++ A  +F  + EK+IV
Sbjct: 217 SACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIV 276

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFV 412
           SW++MI  YA   L + A+  + +M + G++PD +    +L S    G +E+ +     +
Sbjct: 277 SWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLI 336

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             N  + N  +  ALI  YAK  R+ +A+++F  M  ++ + WN  I+G  ++G     L
Sbjct: 337 NGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDAL 396

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITL 531
             F ++  S ++PD  T    L +C     +  G++  +       L  ++     M+ L
Sbjct: 397 GLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDL 456

Query: 532 YAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
             + G LD + ++  +M +E + I W AL+     H
Sbjct: 457 LGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 217/472 (45%), Gaps = 61/472 (12%)

Query: 12  GNSNTSKELL--------LKLNISLANLSRSGHYQDALHLFVQIHSSHK--LKPDIYSLS 61
           GN+N S  +L           N  +  L  +  +Q+++ ++   HS  K  L PD ++  
Sbjct: 56  GNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIY---HSMRKEGLSPDSFTFP 112

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
             L ACA + ++  G ++H+  ++AG +A   V  ++++LY                   
Sbjct: 113 FVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLY------------------- 153

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                       TK G +D A +VFD +PD++   + A I+G    G     I +FR + 
Sbjct: 154 ------------TKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLL 201

Query: 182 KLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           ++ +R D++S   VLS C   G L  G  +   +T++G    V V  AL+  Y  CGN+ 
Sbjct: 202 EMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNME 261

Query: 241 DACKVFEEAKGYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            A  VF+   G +  +I S++ M+ G AS G  +EAL  F  ML   L+P     V V+ 
Sbjct: 262 RARSVFD---GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVL- 317

Query: 300 ACLCPRVG---YQVHAQAMKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
            C C R+G       A  + +G  F   + +  A I MY+ CG++D A  +F  +++KD 
Sbjct: 318 -CSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDR 376

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHA 410
           V WN  IS  A     + A+  + +M+  GI+PD  TF  LL +     +VE      ++
Sbjct: 377 VVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNS 436

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
              +  +   I+    ++    +   + +A+Q+  +M    N I W  L+ G
Sbjct: 437 MECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG 488



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 133/270 (49%), Gaps = 3/270 (1%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           ++ ++ IHA +   G+  +  + N ++           +++I       NI  +NT+I G
Sbjct: 23  LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            +LN    + ++ +  +    L PD +T    L +CAR+     G ++H  V+K    + 
Sbjct: 83  LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             +  ++I LY KCG +D + +VF+ + +K+  SW A IS Y   G+ +EA+  F+ + +
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           +G ++PD  +   VLSAC   G +  G  I D  + + G +      + ++D  G+ G +
Sbjct: 203 MG-LRPDSFSLVEVLSACKRTGDLRSGEWI-DEYITENGMVRNVFVATALVDFYGKCGNM 260

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHG 671
           + A  V +   ++    +W ++    A++G
Sbjct: 261 ERARSVFDGM-LEKNIVSWSSMIQGYASNG 289


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 202/668 (30%), Positives = 333/668 (49%), Gaps = 42/668 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFL 130
           +A  G Q+HA A+  G  +   VAN ++++Y     +   +RVF E  +  +  SW   +
Sbjct: 22  DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 81

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           SA  K      A +VF +M      V++                          ++   +
Sbjct: 82  SAYVKNDQCGDAIQVFGEM------VWSG-------------------------IQPTEF 110

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     ++ GRQ+H++V + G+   V   NAL+ MY   G V  A  +FE+ 
Sbjct: 111 GFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 170

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
                D +S+N ++ G    G    A+     M  + L P+     S++ AC       +
Sbjct: 171 PD--SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDL 228

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K+  ++   +    + MY+    +D+A  +F  +  +D++ WN +IS  + 
Sbjct: 229 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSH 288

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM---VEMIHAFVFINGIITNIQV 423
                 A   +  ++  G+  +  T  ++L S+  +E       +HA     G I +  V
Sbjct: 289 GGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 348

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI +Y K   +  A ++F   S  +II   ++I            ++ F E+L   L
Sbjct: 349 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 408

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD + LS  L++CA +S+   GKQ+H +++K   +S    GNA++  YAKCG ++ +  
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 468

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F+ + E+  +SW+A+I   AQHG GK A+  F  M D G I P+  T T+VL AC+HAG
Sbjct: 469 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG-INPNHITMTSVLCACNHAG 527

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+  R F+SM   +G    E+H SCM+DLLGRAG LD+A  ++NS   QA +  W AL
Sbjct: 528 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 587

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             A   H +  LG++ A  L   E +K   +VLL+N YA++G+W E A +R+L+K + + 
Sbjct: 588 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 647

Query: 724 KQPGCSWI 731
           K+P  SW+
Sbjct: 648 KEPAMSWV 655



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DA+ +F ++  S  ++P  +  S  + AC   RN   G Q+HA  +R G +     AN +
Sbjct: 92  DAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 150

Query: 99  LSLY-KNAR-DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           + +Y K  R D+ SV  +F ++ + DV SW   +S C   GH   A E+  +M    L V
Sbjct: 151 VDMYVKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL-V 207

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            N                               +  +S+L  C  AG  + GRQ+H  + 
Sbjct: 208 PNV------------------------------FMLSSILKACAGAGAFDLGRQIHGFMI 237

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K+       +   L+ MY     + DA KVF+       D I +N ++ G +  GR +EA
Sbjct: 238 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR--DLILWNALISGCSHGGRHDEA 295

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVG---YQVHAQAMKSGFEAYTSVSNAAITM 332
              F  +    L  +  T  +V+ +           QVHA A K GF     V N  I  
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  C  + +A  +F      DI++  +MI+  +Q + G  AI  ++EM   G+ PD F  
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            SLL   AS    E  + +HA +     +++    NAL+  YAK   I+ A   F ++  
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 475

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R +++W+ +I G   +G   + L+ F  ++   + P+  T++  L +C     +   K+ 
Sbjct: 476 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 535

Query: 510 HGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
              + +   I +     + MI L  + G LD ++ + N M  + +   W AL+ A   H 
Sbjct: 536 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHK 595

Query: 568 E 568
           +
Sbjct: 596 D 596



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 10/296 (3%)

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           M++ G+  +EF    +L      ++   +HA     G  +++ V+NAL++ Y     +  
Sbjct: 1   MRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDD 60

Query: 440 AYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           A ++F    S RN ++WN L++ ++ N      +Q F E++ S ++P E+  S  +++C 
Sbjct: 61  ARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACT 120

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
              ++  G+Q+H  V++      +   NA++ +Y K G +D +  +F  M + D +SWNA
Sbjct: 121 GSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNA 180

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LIS    +G    A+     M+  G + P+    +++L AC+ AG  D G +I   M+  
Sbjct: 181 LISGCVLNGHDHRAIELLLQMKSSGLV-PNVFMLSSILKACAGAGAFDLGRQIHGFMIKA 239

Query: 619 YGFIPAEDHLSC-MLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHG 671
                ++D++   ++D+  +  +LD+A +V +     +  D   W AL S C+  G
Sbjct: 240 NA--DSDDYIGVGLVDMYAKNHFLDDAMKVFD---WMSHRDLILWNALISGCSHGG 290



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS+  H + A+ LF+++     L+PD + LS+ L ACA+L     G Q+HA+ ++    +
Sbjct: 387 LSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 445

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                N ++  Y     +   +  FS +    V SW+  +    + GH   A E+F +M 
Sbjct: 446 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 505

Query: 151 DRDL-PVYNAMIT---GCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
           D  + P +  M +    C   G  D     F   +EM  +D   ++YS
Sbjct: 506 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 553


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 202/610 (33%), Positives = 312/610 (51%), Gaps = 16/610 (2%)

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           S C+  G    A +VFD++P + +  +  ++ G TENG+   GI  F E+   D+  D Y
Sbjct: 109 SKCSDFGS---ARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEY 165

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           + ++ +  C     +  G  +H+ V   GFS    V  +L+ MY   G + D+CKVF   
Sbjct: 166 ALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSL 225

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRV 306
           +    + +S+N M+ G  S G   EA   F  ML   +RP+   F+SV  A         
Sbjct: 226 ENR--NQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEK 283

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS--WNTMISTY 364
           G  ++  A + G ++   V  A I M++ CG + E+  +F        V+  WN MIS +
Sbjct: 284 GRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGF 343

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
                G  A+L +L M    I+ D +T+ S L   A    +E V+ +H  ++ +G I  +
Sbjct: 344 TISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI-GV 402

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            + NAL+ AYAK   +    ++F      N I+W TL+  +  +      L  FS++   
Sbjct: 403 SLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREM 462

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P++ T S  L+SCA + SL +G+Q+H    K        + + +I +YAKCG +  +
Sbjct: 463 GFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDA 522

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ++VF  + + D ISW A+IS YAQHG  K+A+  F+ M+ V    P+ ATF  +L ACSH
Sbjct: 523 IKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELV-LPNPNSATFLCLLFACSH 581

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GLVD+G R F  M   YG +P  +H +C++D+LGR G L EA + I    I+     W 
Sbjct: 582 GGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWS 641

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  HGN++L +I A  +L    D  +  VLLSN Y  AG  E   N+R ++K   
Sbjct: 642 TLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKSQA 701

Query: 722 VIKQPGCSWI 731
           + K+ G SWI
Sbjct: 702 MRKETGMSWI 711



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 142/598 (23%), Positives = 265/598 (44%), Gaps = 46/598 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   + +G Y+D +  FV+I     + PD Y+LS  + AC  + +   G  +HA  +  G
Sbjct: 136 MVGATENGFYRDGIDYFVEILGC-DIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRG 194

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +   V  ++L +Y     +    +VF+ ++N +  SW                     
Sbjct: 195 FSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSW--------------------- 233

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGLLEF 206
                     NAMI+G   NG        F  M   ++R +   F SV  ++   G +E 
Sbjct: 234 ----------NAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEK 283

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR ++ +  + G    + V  ALI M+  CG V ++  VF         ++ +N M+ G 
Sbjct: 284 GRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGF 343

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-VGY--QVHAQAMKSGFEAYT 323
              G  EEA++ F  M   +++    T+ S +++    R + Y  Q+H    KSG     
Sbjct: 344 TISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGV 402

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S+ NA +  Y+ CG++D    +F   +E + +SW T+++ Y+Q +    A+  + +M+ +
Sbjct: 403 SLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREM 462

Query: 384 GIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G +P++ TF  +LAS      +E  + +H+     G   +  V + LI  YAK   ++ A
Sbjct: 463 GFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDA 522

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++F ++   ++I+W  +I+G+  +G     L+ F ++ +    P+  T    L +C+  
Sbjct: 523 IKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHG 582

Query: 501 SSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNA 558
             +  G +  H    +  L+ ++     ++ +  + G L  + + +  M IE D   W+ 
Sbjct: 583 GLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWST 642

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS-ACSHAGLVDDGTRIFDSM 615
           L+ A   HG  + A     A Q V    PD      +LS     AG ++ G  + + M
Sbjct: 643 LLGACRVHGNIQLAKI---AAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMM 697



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 145/303 (47%), Gaps = 8/303 (2%)

Query: 303 CPRVGYQVHAQAMKSGF--EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           C +    +H   +K     ++ T + N  +  YS C     A  +F  + +K + SW  +
Sbjct: 76  CLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVL 135

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGI 417
           +    +    R  I  ++E+    I PDE+   + + +   ++ +   EM+HA V   G 
Sbjct: 136 MVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGF 195

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +   V+ +L+  YAK  RI  + ++F+++  RN ++WN +I+GF+ NG   +    F  
Sbjct: 196 SSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLR 255

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L  E+RP+         +  ++  +  G+ I+    +  + S + +G A+I ++AKCG 
Sbjct: 256 MLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGC 315

Query: 538 LDCSLRVF--NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           +  S  VF  N       + WNA+IS +   G G+EA+  F  M     IK D  T+ + 
Sbjct: 316 VTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQ-NNIKRDVYTYCST 374

Query: 596 LSA 598
           L++
Sbjct: 375 LNS 377



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 178/385 (46%), Gaps = 45/385 (11%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           L  N  ++  + SGH ++A+ LF+++   + +K D+Y+  +TL + A++R+  +  QLH 
Sbjct: 334 LPWNAMISGFTISGHGEEAMLLFLRM-CQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHG 392

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
              ++G      + N ++  Y    +L +++++F   +  +  SWTT ++A ++      
Sbjct: 393 MIWKSGSIGVS-LCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSE--- 448

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
                                      +ED  + +F +M ++  + +  +F+ VL+ C A
Sbjct: 449 ---------------------------WED-ALSVFSQMREMGFQPNQVTFSGVLASC-A 479

Query: 202 GL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            L  LE+G+Q+HSL  K+GF+    V + LI MY  CG+V DA KVFE  K    D IS+
Sbjct: 480 SLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDP--DVISW 537

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAM 315
             M+ G A  G  ++AL  FR M +    P+  TF+ ++ AC    L        H    
Sbjct: 538 TAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEE 597

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAI 374
           + G           + +    G++ EA     ++  E D   W+T++   A R  G   +
Sbjct: 598 RYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLG--ACRVHGNIQL 655

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASS 399
                 + +   PD+F    LL+++
Sbjct: 656 AKIAAQKVLSYNPDDFAALVLLSNT 680



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 18/279 (6%)

Query: 408 IHAFVFINGIITN--IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           IH FV    +I      + N L+ AY+K      A Q+F  +  +++ +W  L+ G   N
Sbjct: 83  IHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATEN 142

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           GF   G+ +F E+L  ++ PDEY LS A+ +C  + S+  G+ +H  V+     S+  + 
Sbjct: 143 GFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVN 202

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            +++ +YAK G +  S +VFN +  ++ +SWNA+IS +  +G   EA + F  M     I
Sbjct: 203 TSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLG-EEI 261

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P+ A F +V  A    G V+ G R  + +  + G        + ++D+  + G + E+ 
Sbjct: 262 RPNVACFISVSKAIGQLGDVEKG-RYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESW 320

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            V  S             FS C    NL    +I+G  +
Sbjct: 321 SVFVSN------------FSGCGV--NLPWNAMISGFTI 345


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 206/623 (33%), Positives = 333/623 (53%), Gaps = 20/623 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIG---IGLF 177
           DV++  T ++     G    A  VFD+MP RD+  +N++++    NG  ED     +G+ 
Sbjct: 146 DVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMM 205

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           R    ++V     S  SV+  C     E FG  +H LV KSG   +V++ NAL+ MY   
Sbjct: 206 RSGIPVNVA----SLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKF 261

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G++  + +VF   +    + +S+N  +   A  G  E+ L  FR M    + P  +T  S
Sbjct: 262 GDLESSMRVFNGMQEK--NEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSS 319

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           ++ A +      +G +VH  +++   E+   ++N+ + MY+  G +++A  IF  ++ ++
Sbjct: 320 LLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRN 379

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           +VSWN MI+  AQ      A    +EMQ  G  P+ FT  +LL +   +  V+M   IHA
Sbjct: 380 VVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHA 439

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +     +++++ VSNALI  YAK  ++  A  IF + S ++ +++NTLI G+  +    +
Sbjct: 440 WSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIF-DRSEKDDVSYNTLIVGYSQSQCCFE 498

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F ++  + +  D  +    LS+CA +S+ + GK+IHG +++  L +   L N+++ 
Sbjct: 499 SLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLD 558

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LY K G L  + ++FN +  KD  SWN +I  Y  HG+   A   F  M+D G +  D  
Sbjct: 559 LYTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDG-VDYDHV 617

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           ++ AVLSACSH GLVD G + F  M+      P + H +CM+DLLGRAG L E+  +I +
Sbjct: 618 SYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITN 676

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
               A SD W AL  +C  HG++ L R+ A  L E + +    Y LL N+Y+ +G+W EA
Sbjct: 677 MPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEA 736

Query: 711 ANIRELLKRTGVIKQPGCSWIGS 733
             I+ L+K   V K P  SW+ S
Sbjct: 737 NEIKTLMKSRKVQKNPAYSWVQS 759



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/602 (24%), Positives = 280/602 (46%), Gaps = 51/602 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++ L  +G  +DA    V +  S  +  ++ SL + + AC   R+  FG  +H
Sbjct: 178 IVSWNSLVSALLTNGMLEDAKRAVVGMMRS-GIPVNVASLVSVVPACGTERDEGFGLSVH 236

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L++GL +  ++ N ++ +Y    DL S  RVF+ +Q  +  SW + L          
Sbjct: 237 GLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSAL---------- 286

Query: 141 YACEVFDKMPDRDLPVYNAMITGC-TENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SV 198
                                 GC    G+ +  + +FR M + +V   + + +S+L ++
Sbjct: 287 ----------------------GCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPAL 324

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            D G    G+++H    +      + + N+L+ MY   G +  A  +FE  +G   + +S
Sbjct: 325 VDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGR--NVVS 382

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +N M+  LA  G   EA     +M      P+  T V+++ AC      ++G Q+HA ++
Sbjct: 383 WNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSI 442

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
                +   VSNA I +Y+ CG++  A  IF R  EKD VS+NT+I  Y+Q      ++ 
Sbjct: 443 HRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLH 501

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
            + +M+S GI  D  +F   L++    S F +  E IH  +    + T+  ++N+L+  Y
Sbjct: 502 LFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKE-IHGVLVRRLLNTHPFLANSLLDLY 560

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   +  A +IF+ ++ +++ +WNT+I G+ ++G      + F  +    +  D  +  
Sbjct: 561 TKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYI 620

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIE 550
             LS+C+    +  GK+    ++  N+  +      M+ L  + G L  S+ +  NM   
Sbjct: 621 AVLSACSHGGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFP 680

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL-SACSHAGLVDDGT 609
            ++  W AL+ +   HG+ + A     A + +  +KP+ + +  +L +  S +G+ ++  
Sbjct: 681 ANSDVWGALLGSCRIHGDIELAR---LAAEHLFELKPEHSGYYTLLRNMYSESGMWNEAN 737

Query: 610 RI 611
            I
Sbjct: 738 EI 739



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 235/516 (45%), Gaps = 60/516 (11%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC--------PRVGYQV 310
           +N +   LAS G   EAL  +  M+ + +RP + TF   + A           P  G ++
Sbjct: 74  WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133

Query: 311 HAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           HA A++ G   A     N  +T Y++ G+  +A  +F  +  +DIVSWN+++S      +
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGM 193

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSN 425
              A  A + M   GI  +  +  S++ + G  E  E     +H  V  +G+ + + + N
Sbjct: 194 LEDAKRAVVGMMRSGIPVNVASLVSVVPACG-TERDEGFGLSVHGLVLKSGLDSVVNLGN 252

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+  Y K   ++ + ++F+ M  +N ++WN+ +  F   GF    L+ F  +   E+ P
Sbjct: 253 ALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTP 312

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
              TLS  L +   +     GK++HGY ++  + S + + N+++ +YAK G L+ +  +F
Sbjct: 313 GSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIF 372

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +  ++ +SWNA+I+  AQ+G   EA S    MQ  G   P+  T   +L ACS    V
Sbjct: 373 ENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGEC-PNSFTLVNLLPACSRVASV 431

Query: 606 DDGTR-----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN----------- 649
             G +     I  S+++D  F+      + ++D+  + G L  A+ + +           
Sbjct: 432 KMGKQIHAWSIHRSLMSDL-FVS-----NALIDVYAKCGQLSVAQDIFDRSEKDDVSYNT 485

Query: 650 -------------SQHI--QARSD-------NWWALFSACAAHGNLRLGRIIAGLLLERE 687
                        S H+  Q RS        ++    SACA     + G+ I G+L+ R 
Sbjct: 486 LIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRL 545

Query: 688 QDK-PSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
            +  P +   L ++Y   G+   A+ I   + R  V
Sbjct: 546 LNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDV 581



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 25/380 (6%)

Query: 309 QVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTYA 365
           + HA ++ SG   A   ++ A +  Y++   I  A +I     L+ +    WN++    A
Sbjct: 23  RAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALA 82

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--------IHAFVFINGI 417
              L   A+  Y  M   G+RPD+ TF   L ++    + E         +HA     G+
Sbjct: 83  SAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGL 142

Query: 418 I-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  ++   N L++ YA   R   A ++F  M  R+I++WN+L++  L NG      +   
Sbjct: 143 LLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVV 202

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            ++ S +  +  +L   + +C        G  +HG VLK+ L S ++LGNA++ +Y K G
Sbjct: 203 GMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFG 262

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           DL+ S+RVFN M EK+ +SWN+ +  +A  G  ++ +  F+ M +   + P   T +++L
Sbjct: 263 DLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSE-HEVTPGSVTLSSLL 321

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDLLGRAGYLDEAERVINSQH 652
            A     LVD G       V+ Y    A +      + ++D+  + G L++A  +   ++
Sbjct: 322 PA-----LVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIF--EN 374

Query: 653 IQARS-DNWWALFSACAAHG 671
           I+ R+  +W A+ +  A +G
Sbjct: 375 IEGRNVVSWNAMIANLAQNG 394


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  332 bits (850), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 210/662 (31%), Positives = 331/662 (50%), Gaps = 68/662 (10%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G    A  V +++       +N ++    E G  D  IG+   M +   + D+++    L
Sbjct: 97  GATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYAL 156

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVC 254
             C +      G   H L+  +GF   V V NAL+ MY   G++ DA  VF+E  +  + 
Sbjct: 157 KACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGID 216

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLV------ASLRPSELTFVSVMSACLCPRVGY 308
           D IS+N ++           AL  F +M         + R   ++ V+++ AC   +   
Sbjct: 217 DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALP 276

Query: 309 Q---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM----- 360
           Q   +H+ A+++G  A   V NA I  Y+ CG + +A  +F  ++ KD+VSWN M     
Sbjct: 277 QTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYT 336

Query: 361 ------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
                                         I+ YAQR  G+ A+  + +M   G  P+  
Sbjct: 337 QSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSV 396

Query: 391 TFGSLL---ASSGFIEMVEMIHAFVFINGIIT------------NIQVSNALISAYAKNE 435
           T  SLL   AS G +      HA+     +++            ++ V NALI  Y+K  
Sbjct: 397 TIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR 456

Query: 436 RIKQAYQIFHNMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLS 491
             K A  IF+++    RN++TW  +I G+   G     L+ FSE++     + P+ YT+S
Sbjct: 457 SFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTIS 516

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
             L +CA +SSLR GKQIH YV +++    S   + N +I +Y+KCGD+D +  VF+ M 
Sbjct: 517 CILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           +++ +SW +++S Y  HG GKEA+  F  MQ  G + PD  +F  +L ACSH+G+VD G 
Sbjct: 577 KRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV-PDDISFLVLLYACSHSGMVDQGL 635

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
             FD M +DYG I +  H +C++DLL R+G LD+A + I    ++  +  W AL SAC  
Sbjct: 636 DYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRV 695

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H N+ L       L+  + +    Y L+SNIYA A  W++ A IR+L+K++G+ K+PGCS
Sbjct: 696 HSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCS 755

Query: 730 WI 731
           W+
Sbjct: 756 WV 757



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 198/427 (46%), Gaps = 38/427 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           + DI S+   L ACA+L+      ++H+YA+R G  A   V N ++  Y     +     
Sbjct: 256 RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVN 315

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGY 169
           VF+ ++  DV SW   ++  T+ G    A E+F  M   ++P+    ++A+I G  + GY
Sbjct: 316 VFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGY 375

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS---- 224
               +  F++M       ++ +  S+LS C + G L  G + H+   K    CL+S    
Sbjct: 376 GQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLK---KCLLSLDND 432

Query: 225 -----------VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
                      V NALI MY  C +   A  +F        + +++ VM+ G A  G   
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492

Query: 274 EALIRFRDMLVA--SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS---- 324
           +AL  F +M+    ++ P+  T   ++ AC      R+G Q+HA   +     Y S    
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR--HHEYESSVYF 550

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V+N  I MYS CG +D A  +F  + +++ VSW +M+S Y     G+ A+  + +MQ  G
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFI----NGIITNIQVSNALISAYAKNERIKQA 440
             PD+ +F  LL +     MV+    +  I     G+I + Q    +I   A++ R+ +A
Sbjct: 611 FVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKA 670

Query: 441 YQIFHNM 447
           ++    M
Sbjct: 671 WKTIQEM 677



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 140/576 (24%), Positives = 241/576 (41%), Gaps = 88/576 (15%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           KPD ++L   L AC  L +   G+  H      G ++   V N ++++Y  +  L     
Sbjct: 146 KPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASL 205

Query: 114 VFSEIQNP---DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
           VF EI      DV SW + ++A  K  +           P   L +++ M T   E    
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSN-----------PRTALDLFSEMTTIVHEKATN 254

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +              R D  S  ++L  C +   L   +++HS   ++G      V NAL
Sbjct: 255 E--------------RSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNAL 300

Query: 230 ITMYFNCGNVVDACKVFEEAK------------GYV---------------------CDH 256
           I  Y  CG++ DA  VF   +            GY                       D 
Sbjct: 301 IDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDV 360

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           I+++ ++ G A  G  +EAL  F+ M++    P+ +T +S++SAC        G + HA 
Sbjct: 361 ITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAY 420

Query: 314 AMKSGFEAYTS------------VSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNT 359
           ++K    +  +            V NA I MYS C     A  IF  +  +E+++V+W  
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTV 480

Query: 360 MISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           MI  YAQ      A+  + EM  +   + P+ +T   +L +   +  + M   IHA+V  
Sbjct: 481 MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR 540

Query: 415 NGIITN--IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           +    +    V+N LI  Y+K   +  A  +F +M  RN ++W ++++G+ ++G   + L
Sbjct: 541 HHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEAL 600

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F ++  +   PD+ +  V L +C+    +  G      +  +  +I+       +I L
Sbjct: 601 DIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDL 660

Query: 532 YAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQH 566
            A+ G LD + +    M +E     W AL+SA   H
Sbjct: 661 LARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVH 696



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 169/387 (43%), Gaps = 34/387 (8%)

Query: 290 SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT--------------------SVSNAA 329
           S   F S++  C       Q+H + +  G  +Y                     S+    
Sbjct: 30  SPTHFASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGV 89

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           +  Y +CG   +A  +  R+     V WN ++  + +      AI     M   G +PD 
Sbjct: 90  VASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDH 149

Query: 390 FTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           FT    L + G +         H  +  NG  +N+ V NAL++ Y+++  ++ A  +F  
Sbjct: 150 FTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDE 209

Query: 447 MSPR---NIITWNTLINGFLLNGFPVQGLQHFSELLM------SELRPDEYTLSVALSSC 497
           ++ +   ++I+WN+++   +    P   L  FSE+        +  R D  ++   L +C
Sbjct: 210 ITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPAC 269

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +L   K+IH Y ++N   +   + NA+I  YAKCG +  ++ VFN+M  KD +SWN
Sbjct: 270 ASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWN 329

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+++ Y Q G+   A   FK M+    I  D  T++AV++  +  G   +    F  M+ 
Sbjct: 330 AMVTGYTQSGKFGAAFELFKNMRK-ENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMIL 388

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEA 644
            YG  P    +  +L      G L + 
Sbjct: 389 -YGSEPNSVTIISLLSACASLGALSQG 414



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/288 (21%), Positives = 116/288 (40%), Gaps = 33/288 (11%)

Query: 392 FGSLLASSGFIEMVEMIHAFVFINGI--------------------ITNIQVSNALISAY 431
           F SLL     +  V  IH  +   G+                    ++   +   ++++Y
Sbjct: 34  FASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASY 93

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
                   A  +   + P   + WN L+   +  G   + +     +L +  +PD +TL 
Sbjct: 94  LACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLP 153

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
            AL +C  + S R G   HG +  N   S + + NA++ +Y++ G L+ +  VF+ +  K
Sbjct: 154 YALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRK 213

Query: 552 ---DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-----DQATFTAVLSACSHAG 603
              D ISWN++++A+ +    + A+  F  M  +   K      D  +   +L AC+   
Sbjct: 214 GIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLK 273

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSC--MLDLLGRAGYLDEAERVIN 649
            +     I    + +  F    D   C  ++D   + G + +A  V N
Sbjct: 274 ALPQTKEIHSYAIRNGTF---ADAFVCNALIDTYAKCGSMKDAVNVFN 318



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           ++   + +   ++ G   DAL LF + I   + + P+ Y++S  L ACA+L +   G Q+
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534

Query: 80  HAYALRAG--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           HAY  R      +   VAN ++ +Y    D+ + + VF  +   +  SWT+ +S     G
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 138 HVDYACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
               A ++FDKM      PD D+  +  ++  C+ +G  D G+  F      D+ R +Y
Sbjct: 595 RGKEALDIFDKMQKAGFVPD-DIS-FLVLLYACSHSGMVDQGLDYF------DIMRSDY 645


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 202/668 (30%), Positives = 333/668 (49%), Gaps = 42/668 (6%)

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFL 130
           +A  G Q+HA A+  G  +   VAN ++++Y     +   +RVF E  +  +  SW   +
Sbjct: 115 DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLM 174

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           SA  K      A +VF +M      V++                          ++   +
Sbjct: 175 SAYVKNDQCGDAIQVFGEM------VWSG-------------------------IQPTEF 203

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
            F+ V++ C     ++ GRQ+H++V + G+   V   NAL+ MY   G V  A  +FE+ 
Sbjct: 204 GFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKM 263

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
                D +S+N ++ G    G    A+     M  + L P+     S++ AC       +
Sbjct: 264 PD--SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDL 321

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K+  ++   +    + MY+    +D+A  +F  +  +D++ WN +IS  + 
Sbjct: 322 GRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSH 381

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM---VEMIHAFVFINGIITNIQV 423
                 A   +  ++  G+  +  T  ++L S+  +E       +HA     G I +  V
Sbjct: 382 GGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHV 441

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI +Y K   +  A ++F   S  +II   ++I            ++ F E+L   L
Sbjct: 442 VNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGL 501

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PD + LS  L++CA +S+   GKQ+H +++K   +S    GNA++  YAKCG ++ +  
Sbjct: 502 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 561

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F+ + E+  +SW+A+I   AQHG GK A+  F  M D G I P+  T T+VL AC+HAG
Sbjct: 562 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG-INPNHITMTSVLCACNHAG 620

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD+  R F+SM   +G    E+H SCM+DLLGRAG LD+A  ++NS   QA +  W AL
Sbjct: 621 LVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGAL 680

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             A   H +  LG++ A  L   E +K   +VLL+N YA++G+W E A +R+L+K + + 
Sbjct: 681 LGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIK 740

Query: 724 KQPGCSWI 731
           K+P  SW+
Sbjct: 741 KEPAMSWV 748



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 176/644 (27%), Positives = 300/644 (46%), Gaps = 50/644 (7%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  LHA  L++G  A   + N ++S Y   R     +RVF EI +P              
Sbjct: 23  GAHLHANLLKSGFLA--SLRNHLISFYSKCRRPCCARRVFDEIPDP-------------- 66

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                  C V           +++++T  + NG     I  F  M    V  + ++   V
Sbjct: 67  -------CHV----------SWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVV 109

Query: 196 LS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L  V DA   + G Q+H++   +GF   V V NAL+ MY   G + DA +VF+EA G   
Sbjct: 110 LKCVPDA---QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEA-GSER 165

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           + +S+N +M       +  +A+  F +M+ + ++P+E  F  V++AC   R    G QVH
Sbjct: 166 NAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVH 225

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  ++ G+E     +NA + MY   G++D A +IF ++ + D+VSWN +IS         
Sbjct: 226 AMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDH 285

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            AI   L+M+S G+ P+ F   S+L   A +G  ++   IH F+      ++  +   L+
Sbjct: 286 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 345

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAKN  +  A ++F  MS R++I WN LI+G    G   +    F  L    L  +  
Sbjct: 346 DMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 405

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL+  L S A + +    +Q+H    K   I    + N +I  Y KC  L  ++RVF   
Sbjct: 406 TLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEEC 465

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D I+  ++I+A +Q   G+ A+  F  M   G ++PD    +++L+AC+     + G
Sbjct: 466 SSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKG-LEPDPFVLSSLLNACASLSAYEQG 524

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            ++   ++    F+      + ++    + G +++AE   +S   +    +W A+    A
Sbjct: 525 KQVHAHLIKRQ-FMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVV-SWSAMIGGLA 582

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
            HG+ +    + G +++ E   P+   + S + A   AGL +EA
Sbjct: 583 QHGHGKRALELFGRMVD-EGINPNHITMTSVLCACNHAGLVDEA 625



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/523 (30%), Positives = 257/523 (49%), Gaps = 21/523 (4%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  LH+ + KSGF  L S+ N LI+ Y  C     A +VF+E       H+S++ ++   
Sbjct: 23  GAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEIPDPC--HVSWSSLVTAY 78

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
           ++ G    A+  F  M    +  +E     V+      ++G QVHA AM +GF +   V+
Sbjct: 79  SNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVA 138

Query: 327 NAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           NA + MY   G +D+A  +F     E++ VSWN ++S Y + +    AI  + EM   GI
Sbjct: 139 NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P EF F  ++     S  I+    +HA V   G   ++  +NAL+  Y K  R+  A  
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  M   ++++WN LI+G +LNG   + ++   ++  S L P+ + LS  L +CA   +
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
              G+QIHG+++K N  S   +G  ++ +YAK   LD +++VF+ M  +D I WNALIS 
Sbjct: 319 FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISG 378

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL-VDDGTRIFDSMVNDYGF 621
            +  G   EA S F  ++  G +  ++ T  AVL   S A L     TR   ++    GF
Sbjct: 379 CSHGGRHDEAFSIFYGLRKEG-LGVNRTTLAAVLK--STASLEAASATRQVHALAEKIGF 435

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
           I     ++ ++D   +   L +A RV      +  S +  A+ S   A      G     
Sbjct: 436 IFDAHVVNGLIDSYWKCSCLSDAIRVFE----ECSSGDIIAVTSMITALSQCDHGEGAIK 491

Query: 682 LLLE--REQDKPSVYVLLSNIYAAAGL--WEEAANIR-ELLKR 719
           L +E  R+  +P  +VL S + A A L  +E+   +   L+KR
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 235/541 (43%), Gaps = 47/541 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DA+ +F ++  S  ++P  +  S  + AC   RN   G Q+HA  +R G +     AN +
Sbjct: 185 DAIQVFGEMVWS-GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 243

Query: 99  LSLY-KNAR-DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           + +Y K  R D+ SV  +F ++ + DV SW   +S C   GH   A E+  +M    L V
Sbjct: 244 VDMYVKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL-V 300

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
            N                               +  +S+L  C  AG  + GRQ+H  + 
Sbjct: 301 PNV------------------------------FMLSSILKACAGAGAFDLGRQIHGFMI 330

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K+       +   L+ MY     + DA KVF+       D I +N ++ G +  GR +EA
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHR--DLILWNALISGCSHGGRHDEA 388

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
              F  +    L  +  T  +V+ +           QVHA A K GF     V N  I  
Sbjct: 389 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 448

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y  C  + +A  +F      DI++  +MI+  +Q + G  AI  ++EM   G+ PD F  
Sbjct: 449 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 508

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            SLL   AS    E  + +HA +     +++    NAL+  YAK   I+ A   F ++  
Sbjct: 509 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R +++W+ +I G   +G   + L+ F  ++   + P+  T++  L +C     +   K+ 
Sbjct: 569 RGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRY 628

Query: 510 HGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
              + +   I +     + MI L  + G LD ++ + N M  + +   W AL+ A   H 
Sbjct: 629 FNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHK 688

Query: 568 E 568
           +
Sbjct: 689 D 689



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS+  H + A+ LF+++     L+PD + LS+ L ACA+L     G Q+HA+ ++    +
Sbjct: 480 LSQCDHGEGAIKLFMEMLRK-GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS 538

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                N ++  Y     +   +  FS +    V SW+  +    + GH   A E+F +M 
Sbjct: 539 DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMV 598

Query: 151 DRDL-PVYNAMIT---GCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
           D  + P +  M +    C   G  D     F   +EM  +D   ++YS
Sbjct: 599 DEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYS 646


>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 194/620 (31%), Positives = 337/620 (54%), Gaps = 13/620 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D Y+    +++  K   ++ A +VFD+MP RD   +NA+I+    +G  D    L   M 
Sbjct: 27  DPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMR 86

Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +     D+ +F S+L  V   G L+ G+QLHS++ K G S  V   +AL+ MY  CG V 
Sbjct: 87  RSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVD 146

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT---FVSV 297
           D   VF+       +++S+N ++   + VG  + A      M +  +   + T    +++
Sbjct: 147 DGYVVFQSMPER--NYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDDGTVSPLLTL 204

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDIVS 356
           +   +  ++  Q+H + +K G E + +V NA IT YS C  + +A  +F   +  +D+V+
Sbjct: 205 LDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCRDLVT 264

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           WN+M+  Y        A   +L+MQ+ G  PD +T+  ++ +    E     + +H  V 
Sbjct: 265 WNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVI 324

Query: 414 INGIITNIQVSNALISAYAK-NER-IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
             G+  ++ VSNALIS Y + N+R ++ A +IF +M  ++  TWN+++ G++  G     
Sbjct: 325 KRGLDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDA 384

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L+ F ++    +  D YT S  + SC+ +++L+ G+Q H   LK    +   +G+++I +
Sbjct: 385 LRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSLIFM 444

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y+KCG ++ + + F    + + I WN++I  YAQHG+G  A+  F  M++  ++K D  T
Sbjct: 445 YSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKE-RKVKLDHIT 503

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F AVL+ACSH GLV++G    +SM +D+G  P ++H +C +DL GRAG+L +A  ++ + 
Sbjct: 504 FVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETM 563

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
             +  +     L  AC   G++ L   IA +LLE E ++   YV+LS +Y    +W E A
Sbjct: 564 PFEPDAMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKA 623

Query: 712 NIRELLKRTGVIKQPGCSWI 731
           ++  +++  GV K PG SWI
Sbjct: 624 SVTRMMRERGVKKVPGWSWI 643



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 133/569 (23%), Positives = 229/569 (40%), Gaps = 83/569 (14%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +  + L   A +     G QLH+  L+ GL                           
Sbjct: 93  DSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGL--------------------------- 125

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
               + +V+S +  L    K G VD    VF  MP+R+   +N ++   +  G  D+   
Sbjct: 126 ----SENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFW 181

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +   M    V  D+ + + +L++ D  +  +   QLH  + K G     +V NA IT Y 
Sbjct: 182 VLSCMELEGVEIDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYS 241

Query: 235 NCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            C ++ DA +VF+ A   +C D +++N M+       + + A   F DM      P   T
Sbjct: 242 ECCSLQDAERVFDGA--VLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYT 299

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-----I 345
           +  ++ AC        G  +H   +K G +    VSNA I+MY    + ++ CM     I
Sbjct: 300 YTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYI---RFNDRCMEDALRI 356

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFI 402
           F  +  KD  +WN++++ Y Q  L   A+  +L+M+ + I  D +TF +++ S      +
Sbjct: 357 FFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATL 416

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           ++ +  H      G  TN  V ++LI  Y+K   I+ A + F   S  N I WN++I G+
Sbjct: 417 QLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGY 476

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +G     L  F  +   +++ D  T    L++C+    +  G          N I  M
Sbjct: 477 AQHGQGNIALDLFYMMKERKVKLDHITFVAVLTACSHNGLVEEG---------CNFIESM 527

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
                                  +  I      +   I  Y + G  K+A +  + M   
Sbjct: 528 E---------------------SDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMP-- 564

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              +PD      +L AC   G ++  ++I
Sbjct: 565 --FEPDAMVLKTLLGACRFCGDIELASQI 591



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H +A+K G  A    +N  IT Y+ C +++ A  +F  +  +D VSWN +IS +A     
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +       M+      D  TFGS+L   A  G +++ + +H+ +   G+  N+   +AL
Sbjct: 76  DTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSAL 135

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK  R+   Y +F +M  RN ++WNTL+  +   G         S + +  +  D+
Sbjct: 136 LDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVEIDD 195

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN- 546
            T+S  L+        +   Q+H  ++K+ L    ++ NA IT Y++C  L  + RVF+ 
Sbjct: 196 GTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDG 255

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            ++ +D ++WN+++ AY  H +   A   F  MQ+ G  +PD  T+T ++ ACS
Sbjct: 256 AVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFG-FEPDAYTYTGIVGACS 308



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 36/252 (14%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK--NARDLVS 110
            +PD Y+ +  + AC+   +   G  LH   ++ GL     V+N ++S+Y   N R +  
Sbjct: 293 FEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMED 352

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
             R+F  +   D  +W                               N+++ G  + G  
Sbjct: 353 ALRIFFSMDLKDCCTW-------------------------------NSILAGYVQVGLS 381

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
           +  + LF +M  L +  D+Y+F++V+  C D   L+ G+Q H L  K GF     V ++L
Sbjct: 382 EDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGFDTNSYVGSSL 441

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY  CG + DA K FE       + I +N ++ G A  G+   AL  F  M    ++ 
Sbjct: 442 IFMYSKCGIIEDARKSFEATSKD--NAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKL 499

Query: 290 SELTFVSVMSAC 301
             +TFV+V++AC
Sbjct: 500 DHITFVAVLTAC 511



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 22/233 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA   + G  +DAL LF+Q+     ++ D Y+ S  + +C++L     G Q H  AL
Sbjct: 369 NSILAGYVQVGLSEDALRLFLQMRCL-VIEIDHYTFSAVIRSCSDLATLQLGQQFHVLAL 427

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +V ++++ +Y     +   ++ F      +   W + +    + G  + A +
Sbjct: 428 KVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALD 487

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASVLS 197
           +F  M +R    D   + A++T C+ NG  + G      M     +  R+++Y+ A  L 
Sbjct: 488 LFYMMKERKVKLDHITFVAVLTACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDL- 546

Query: 198 VCDAGLLEFGRQLH-----SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
                   +GR  H     +LV    F     V+  L+     CG++  A ++
Sbjct: 547 --------YGRAGHLKKATALVETMPFEPDAMVLKTLLGACRFCGDIELASQI 591



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 2/141 (1%)

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H   +K   I+     N +IT YAKC +L+ + +VF+ M  +DT+SWNA+ISA+A  G+ 
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
                   AM+       D  TF ++L   ++ G +  G ++   M+   G        S
Sbjct: 76  DTTWQLLGAMRRSTH-AFDSRTFGSILKGVAYVGKLKLGQQLHSVMLK-VGLSENVFSGS 133

Query: 630 CMLDLLGRAGYLDEAERVINS 650
            +LD+  + G +D+   V  S
Sbjct: 134 ALLDMYAKCGRVDDGYVVFQS 154


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 219/686 (31%), Positives = 339/686 (49%), Gaps = 34/686 (4%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYP----HVANTILSLYKNARDLVSVKRVFSEIQNP- 121
           C  +R   F  +  A  L +     P    H    +L       D +S K +  +I    
Sbjct: 20  CNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKG 79

Query: 122 ---DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG--CTENGYEDIGIGL 176
              D+++    L+A  K G    A  +FD+MP+R+   +  +  G  C +       IGL
Sbjct: 80  SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDP------IGL 133

Query: 177 FREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           +  +H+     + + F S L +       E    LHS + K G+     V  ALI  Y  
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV 193

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV----GRVEEALIRFRDMLVASLRPSE 291
           CG+V  A  VFE   G +C  I   V+  G+ S     G  E++L     M +A   P+ 
Sbjct: 194 CGSVDSARTVFE---GILCKDI---VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF + + A +          VH Q +K+ +     V    + +Y+  G + +A  +F  
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE 307

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MV 405
           + + D+V W+ MI+ + Q      A+  ++ M+   + P+EFT  S+L      +   + 
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  V   G   +I VSNALI  YAK E++  A ++F  +S +N ++WNT+I G+   
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           G   +    F E L +++   E T S AL +CA ++S+  G Q+HG  +K N   K+++ 
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N++I +YAKCGD+  +  VFN M   D  SWNALIS Y+ HG G++A+     M+D    
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD-C 546

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KP+  TF  VLS CS+AGL+D G   F+SM+ D+G  P  +H +CM+ LLGR+G LD+A 
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           ++I     +     W A+ SA     N    R  A  +L+      + YVL+SN+YA A 
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W   A+IR+ +K  GV K+PG SWI
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLSWI 692



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 198/437 (45%), Gaps = 43/437 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            +G+++D+L L   +  +    P+ Y+  T L A   L    F   +H   L+      P
Sbjct: 224 ENGYFEDSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   +L LY    D+    +VF+E+   DV  W+                         
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF------------------------ 318

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLH 211
                  MI    +NG+ +  + LF  M +  V  + ++ +S+L+ C  G     G QLH
Sbjct: 319 -------MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            LV K GF   + V NALI +Y  C  +  A K+F E      + +S+N ++ G  ++G 
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK--NEVSWNTVIVGYENLGE 429

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
             +A   FR+ L   +  +E+TF S + AC       +G QVH  A+K+      +VSN+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MY+ CG I  A  +F  ++  D+ SWN +IS Y+   LGR A+     M+    +P+
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549

Query: 389 EFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
             TF  +L   +++G I+   E   + +  +GI   ++    ++    ++ ++ +A ++ 
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609

Query: 445 HNMS-PRNIITWNTLIN 460
             +    +++ W  +++
Sbjct: 610 EGIPYEPSVMIWRAMLS 626



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 58/356 (16%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++G   +A+ LF+++  +  + P+ ++LS+ L  CA  + +  G QLH   ++ G
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVV-PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                +V+N ++ +Y     + +  ++F+E+ + +  SW T +                 
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV---------------- 422

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIG-----LFREMHKLDVRRDNYSFASVLSVCDA- 201
                               GYE++G G     +FRE  +  V     +F+S L  C + 
Sbjct: 423 --------------------GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             ++ G Q+H L  K+  +  V+V N+LI MY  CG++  A  VF E +    D  S+N 
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME--TIDVASWNA 520

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQ 313
           ++ G ++ G   +AL     M     +P+ LTF+ V+S C    +  Q        +   
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
            ++   E YT +    + +    G++D+A  +   +  E  ++ W  M+S    +N
Sbjct: 581 GIEPCLEHYTCM----VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQN 632


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 217/717 (30%), Positives = 368/717 (51%), Gaps = 49/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   ++G +  AL L+ ++      +PD  +    L +C+ + +     ++HA  +
Sbjct: 113 NQMLSAYGKNGLWNRALELYHRM-CEEGPEPDKITYFIVLGSCSAVGSLREAREIHASII 171

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            A     P +    LSL                 QN  V  +        K G V+ A +
Sbjct: 172 EA-----PQIIRDNLSL-----------------QNALVNMYG-------KCGSVEEARK 202

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD + +RD   + +MI+    NG+ D  + L+++M    ++ D+ +F S L  C    L
Sbjct: 203 VFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTK--L 260

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVM 262
             G+ +H+ +  S       V +ALI MY  CG+V  A + FE  + K  VC    +  +
Sbjct: 261 VDGKAIHARIVSSNMESDF-VGSALINMYARCGDVSSARQAFEKIQNKHVVC----WTSL 315

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           M          EAL  +  M    +    +T+V+ + AC      + G  +H++  + GF
Sbjct: 316 MTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF 375

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           ++   V  A +TMY+ CG++D A  +F R+ Q++++  W  MIS YAQ    + A+  Y 
Sbjct: 376 QSLV-VHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYD 434

Query: 379 EMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +M + G RP+E+TF ++LA   SSG +E    IH  V  + + +N+ V NAL++ YAK  
Sbjct: 435 QMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCG 494

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A   F     +++++WN +I  +  +G   + L  +  +    + PDE T++ +LS
Sbjct: 495 SLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLS 554

Query: 496 SCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           +CA   SL+ G++IH  VLKN +  S + +  A++ +Y +CG L+ +  +F  M ++D +
Sbjct: 555 ACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVL 614

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SW A+ SAYAQ G   + +  +  M   G I+P++ TFT++L  CSHAGL+  G   F  
Sbjct: 615 SWTAMTSAYAQQGHADQVLDLYLEMVLHG-IRPNEITFTSILVGCSHAGLLARGVECFLE 673

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M +++  +P  +H  CM+DLLGR+G L +AE ++ S   Q  S  W  +  +C  H +  
Sbjct: 674 MQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDAD 733

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +  A  + E + +  S+Y LLS+I+ AAGL +EA  ++  +K  G+ K PG S I
Sbjct: 734 TAKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLI 790



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 180/616 (29%), Positives = 305/616 (49%), Gaps = 43/616 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C  L + A G  +H + LR G      + N ++ +Y N  ++   +  F   QN   
Sbjct: 49  LQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAF---QN--- 102

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                F S                    + +  YN M++   +NG  +  + L+  M + 
Sbjct: 103 -----FASI-------------------KAVACYNQMLSAYGKNGLWNRALELYHRMCEE 138

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG--FSCLVSVVNALITMYFNCGNVV 240
               D  ++  VL  C A G L   R++H+ + ++       +S+ NAL+ MY  CG+V 
Sbjct: 139 GPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVE 198

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +A KVF+  K    D +S+  M+   A+ G  +EAL  ++ M    ++P  +TF S + A
Sbjct: 199 EARKVFDGIKNR--DAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLA 256

Query: 301 CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           C     G  +HA+ + S  E+   V +A I MY+ CG +  A   F ++Q K +V W ++
Sbjct: 257 CTKLVDGKAIHARIVSSNMES-DFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSL 315

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           ++ Y Q    R A+  Y  M   G+  D  T+ + L   AS G ++  + IH+ VF  G 
Sbjct: 316 MTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF 375

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFS 476
             ++ V  AL++ YAK   +  A  +F+ +   RN+  W  +I+ +   G   + L+ + 
Sbjct: 376 -QSLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYD 434

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +++    RP+EYT S  L++C+    L  G +IHG+V  + L S +++ NA++T+YAKCG
Sbjct: 435 QMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCG 494

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            L+ +   F     KD +SWNA+I AYAQHG G+EA+  ++ M   G + PD+ T  + L
Sbjct: 495 SLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQG-VLPDEVTIASSL 553

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SAC+ +G +  G  I   ++ +  F  +    + ++++ GR G L+ A R +     Q  
Sbjct: 554 SACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETA-RSMFEDMGQRD 612

Query: 657 SDNWWALFSACAAHGN 672
             +W A+ SA A  G+
Sbjct: 613 VLSWTAMTSAYAQQGH 628



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 195/403 (48%), Gaps = 15/403 (3%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYA 365
           G  VH   +++G      + N  I MY +CG+I  A   F      K +  +N M+S Y 
Sbjct: 61  GKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYG 120

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVF--INGIITN 420
           +  L   A+  Y  M   G  PD+ T+  +L S    G +     IHA +      I  N
Sbjct: 121 KNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDN 180

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + + NAL++ Y K   +++A ++F  +  R+ ++W ++I+ +  NGF  + L  + ++  
Sbjct: 181 LSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDA 240

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             ++PD  T + AL +C +   L  GK IH  ++ +N+ S   +G+A+I +YA+CGD+  
Sbjct: 241 DGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNMESDF-VGSALINMYARCGDVSS 296

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + + F  +  K  + W +L++AY Q    +EA+  +  M   G +  D  T+   L AC+
Sbjct: 297 ARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEG-VHADGVTYVTALGACA 355

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
             G + +G  I  S V + GF     H + +L +  + G LD A  V N    +     W
Sbjct: 356 SLGALKEGKAIH-SRVFECGFQSLVVH-TALLTMYAKCGELDAARAVFNRVRQKRNVYCW 413

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            A+ SA A  G+ +    +   ++  E  +P+ Y   SN+ AA
Sbjct: 414 TAMISAYAQAGHTQEALELYDQMVA-EGTRPNEYT-FSNVLAA 454


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 213/681 (31%), Positives = 345/681 (50%), Gaps = 42/681 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + +T  ++C  L +   G Q+  + ++ G +    VAN+++S++ +          FS +
Sbjct: 299 TFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS----------FSSV 348

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           +                      AC VFD M + D+  +NAMI+    +G     +  F 
Sbjct: 349 EE---------------------ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 387

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M  L    ++ + +S+LSVC +   L++GR +H LV K G    V + N L+T+Y   G
Sbjct: 388 WMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAG 447

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              DA  VF+       D IS+N MM      G+  + L    ++L      + +TF S 
Sbjct: 448 RSEDAELVFQAMTER--DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASA 505

Query: 298 MSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  P    +   VHA  + +GF  +  V NA +TMY   G + EA  +   + + D 
Sbjct: 506 LAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR 565

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHA 410
           V+WN +I  +A+      A+ AY  ++  GI  +  T  S+L    A    ++    IHA
Sbjct: 566 VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHA 625

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            + + G  ++  V N+LI+ YAK   +  +  IF  +  ++ ITWN ++     +G   +
Sbjct: 626 HIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEE 685

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F E+    +  D+++ S  L++ A ++ L  G+Q+HG V+K    S + + NA + 
Sbjct: 686 ALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 745

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y KCG++   L++    I +  +SWN LISA+A+HG  ++A   F  M  +G  KPD  
Sbjct: 746 MYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP-KPDHV 804

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++LSAC+H GLVD+G   +DSM  ++G  P  +H  C++DLLGR+G L  AE  I  
Sbjct: 805 TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 864

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             +      W +L +AC  HGNL L R  A  LLE +    S YVL SN+ A +G WE+ 
Sbjct: 865 MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDV 924

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            N+R+ +    + KQP CSW+
Sbjct: 925 ENLRKEMGSNNIKKQPACSWV 945



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 174/661 (26%), Positives = 329/661 (49%), Gaps = 50/661 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA-FGNQLHAYALRA 86
           L+   R G Y++A+ LF Q+     ++P+ + +++ + AC+     A  G Q+H + ++ 
Sbjct: 167 LSGYVRVGLYEEAVGLFCQMWGL-GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT 225

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G+    +V   ++  Y +   + + +++F E+ + +V SWT+                  
Sbjct: 226 GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTS------------------ 267

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE- 205
                        ++ G +++G     + +++ M +  V  +  +FA+V S C  GLLE 
Sbjct: 268 -------------LMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC--GLLED 312

Query: 206 --FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G Q+   + + GF   VSV N+LI+M+ +  +V +AC VF+      CD IS+N M+
Sbjct: 313 QVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN--ECDIISWNAMI 370

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
              A  G   E+L  F  M       +  T  S++S C      + G  +H   +K G +
Sbjct: 371 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 430

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   + N  +T+YS  G+ ++A ++F  + E+D++SWN+M++ Y Q       +    E+
Sbjct: 431 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 490

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
             +G   +  TF S LA+    E +   +++HA + + G    + V NAL++ Y K   +
Sbjct: 491 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 550

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++   M   + +TWN LI G   N  P + ++ +  +    +  +  T+   L +C
Sbjct: 551 MEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 610

Query: 498 ARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           +     L+HG  IH +++     S   + N++IT+YAKCGDL+ S  +F+ +  K  I+W
Sbjct: 611 SAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITW 670

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA+++A A HG G+EA+  F  M++VG +  DQ +F+  L+A ++  ++++G ++   +V
Sbjct: 671 NAMVAANAHHGCGEEALKIFGEMRNVG-VNLDQFSFSGGLAATANLAVLEEGQQL-HGLV 728

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
              GF       +  +D+ G+ G + +  +++  Q I     +W  L SA A HG  +  
Sbjct: 729 IKLGFESDLHVTNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQKA 787

Query: 677 R 677
           R
Sbjct: 788 R 788



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 297/564 (52%), Gaps = 20/564 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N  ++   T ++  +K G++++A  VFD+M  R+   ++ M++G    G  +  +GLF +
Sbjct: 126 NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 185

Query: 180 MHKLDVRRDNYSFASVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           M  L V  + +  AS+++ C     + + G Q+H  V K+G    V V  AL+  Y + G
Sbjct: 186 MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 245

Query: 238 NVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
            V +A K+FEE      DH  +S+  +M G +  G   E L  ++ M    +  ++ TF 
Sbjct: 246 LVYNAQKLFEEMP----DHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFA 301

Query: 296 SVMSAC--LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           +V S+C  L  +V GYQV    ++ GFE   SV+N+ I+M+SS   ++EAC +F  + E 
Sbjct: 302 TVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 361

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IH 409
           DI+SWN MIS YA   L R ++  +  M+ +    +  T  SLL+    ++ ++    IH
Sbjct: 362 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 421

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
             V   G+ +N+ + N L++ Y++  R + A  +F  M+ R++I+WN+++  ++ +G  +
Sbjct: 422 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 481

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
            GL+  +ELL      +  T + AL++C+    L   K +H  ++       + +GNA++
Sbjct: 482 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 541

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           T+Y K G +  + +V   M + D ++WNALI  +A++ E  EAV  +K +++ G I  + 
Sbjct: 542 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKG-IPANY 600

Query: 590 ATFTAVLSACSHA-GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            T  +VL ACS    L+  G  I   +V   GF   +   + ++ +  + G L+ +  + 
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIF 659

Query: 649 NSQHIQARSD-NWWALFSACAAHG 671
           +   +  +S   W A+ +A A HG
Sbjct: 660 DG--LGNKSPITWNAMVAANAHHG 681



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 250/507 (49%), Gaps = 20/507 (3%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ LH+       +  +   N LI MY   GN+  A  VF+E +    +  S++ M+ G 
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR--NEASWSTMLSGY 170

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAY 322
             VG  EEA+  F  M    + P+     S+++AC         G+QVH   +K+G    
Sbjct: 171 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 230

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V  A +  Y S G +  A  +F  + + ++VSW +++  Y+        +  Y  M+ 
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290

Query: 383 VGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G+  ++ TF ++ +S G +E   +   +   +   G   ++ V+N+LIS ++    +++
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F +M+  +II+WN +I+ +  +G   + L+ F  +       +  TLS  LS C+ 
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +L+ G+ IHG V+K  L S + + N ++TLY++ G  + +  VF  M E+D ISWN++
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++ Y Q G+  + +     +  +G++  +  TF + L+ACS+   + + ++I  +++   
Sbjct: 471 MACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIE-SKIVHALIIVA 528

Query: 620 GFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
           GF    D L   + ++ + G+ G + EA++V+ +   Q     W AL    A   N    
Sbjct: 529 GF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTM-PQPDRVTWNALIGGHAE--NEEPN 582

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAA 703
             +    L RE+  P+ Y+ + ++  A
Sbjct: 583 EAVKAYKLIREKGIPANYITMVSVLGA 609



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 5/162 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +  G  ++AL +F ++ +   +  D +S S  LAA ANL     G QLH   +
Sbjct: 671 NAMVAANAHHGCGEEALKIFGEMRNV-GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 729

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G ++  HV N  + +Y    ++  V ++  +  N    SW   +SA  + G    A E
Sbjct: 730 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 789

Query: 145 VFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
            F +M    P  D   + ++++ C   G  D G+  +  M +
Sbjct: 790 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR 831



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  L   + I+S   GK +H + +  ++   +   N +I +Y+K G+++ +  VF+ M 
Sbjct: 97  VNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR 156

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG-LVDDG 608
            ++  SW+ ++S Y + G  +EAV  F  M  +G ++P+     ++++ACS +G + D+G
Sbjct: 157 HRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG-VEPNGFMVASLITACSRSGYMADEG 215

Query: 609 TRI 611
            ++
Sbjct: 216 FQV 218


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 185/549 (33%), Positives = 289/549 (52%), Gaps = 19/549 (3%)

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           S  D   L  G+QLHSL+   GFS     + +LI MY  CG + +A  VF +     C  
Sbjct: 20  SCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDP----CHE 75

Query: 257 ---ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
               +YN ++ G  S G   +    ++ M +  + P + TF  V+  C       ++H  
Sbjct: 76  RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVKKIHGC 135

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K G E    V +A +  Y   G +++A  +F  L  +D+V WN MI+ YA+      A
Sbjct: 136 LLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEA 195

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M   G+ P  FT   +L   AS G ++  + +H  V   G  + + VSNALI  
Sbjct: 196 LEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDM 255

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K + I  A  IF  ++ ++I +WN++I+     G     L+ F ++L S + PD  T+
Sbjct: 256 YGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTI 315

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNL--------ISKMSLGNAMITLYAKCGDLDCSL 542
           +  L +C+ +++L HG++IHGY++ N L        +  + + NA++ +YAKCG ++ +L
Sbjct: 316 TTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNAL 375

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           ++F+ M +KD  SWN +I  Y  HG   EA+  F  M +    KP++ T   VLSAC+HA
Sbjct: 376 KIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCE-AEFKPNEVTLVGVLSACNHA 434

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           G V  G      M + +G IP  +H +C++D+LGRAG+L++A  ++    IQA    W A
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L  AC  HGN  L  I A  +L+ E +    YVL+SN+Y   G +EE   +R+ +K   V
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNV 554

Query: 723 IKQPGCSWI 731
            K PGCSWI
Sbjct: 555 KKTPGCSWI 563



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 251/526 (47%), Gaps = 52/526 (9%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L +CA+ +N   G QLH+  +  G    P                            P +
Sbjct: 18  LQSCADHQNLNKGKQLHSLMITYGFSPSP----------------------------PSI 49

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            S     S C +MG        +D   +R++  YNA+I+G   NG    G   +++M   
Sbjct: 50  TSLINMYSKCGQMGEAILV--FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLE 107

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            V  D Y+F  V+  C   ++E  +++H  + K G    V V +AL+  Y   G++ DA 
Sbjct: 108 GVMPDKYTFPCVVRTC-CEVMEV-KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQ 165

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
           KVF E    + D + +N M++G A +G ++EAL  FR M V  + PS  T   ++S    
Sbjct: 166 KVFGELS--IRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSV-FA 222

Query: 304 PRV----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            R     G  VH   MK G+++  SVSNA I MY  C  I +A +IF  + EKDI SWN+
Sbjct: 223 SRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNS 282

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
           +IS + Q       +  + +M   GI PD  T  ++L +   +  +     IH ++ ING
Sbjct: 283 IISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIING 342

Query: 417 I--------ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           +        + N+ VSNA++  YAK   +  A +IF +MS +++ +WN +I G+ ++G+ 
Sbjct: 343 LGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYA 402

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNA 527
           ++ L  FS++  +E +P+E TL   LS+C     + HG+     +     +I  +     
Sbjct: 403 LEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTC 462

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEA 572
           +I +  + G L+ +  +   M I+ + + W AL+ A   HG  + A
Sbjct: 463 VIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELA 508



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 184/434 (42%), Gaps = 63/434 (14%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD Y+    +  C  +       ++H   L+ GL+    V + +++ Y     +   ++V
Sbjct: 111 PDKYTFPCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKV 167

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F E+   DV  W   ++   K+G +D A EV                             
Sbjct: 168 FGELSIRDVVLWNAMINGYAKIGCLDEALEV----------------------------- 198

Query: 175 GLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
             FR MH   V    ++   +LSV    G L+ G+ +H +V K G+   VSV NALI MY
Sbjct: 199 --FRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMY 256

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C ++ DA  +FE       D  S+N ++      G  +  L  F  ML + + P  +T
Sbjct: 257 GKCKHIGDALIIFEMINEK--DIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314

Query: 294 FVSVMSAC--LCPRV-GYQVHAQAMKSGFEAYTS--------VSNAAITMYSSCGKIDEA 342
             +V+ AC  L   + G ++H   + +G              VSNA + MY+ CG ++ A
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---S 399
             IF  + +KD+ SWN MI  Y        A+  + +M     +P+E T   +L++   +
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHA 434

Query: 400 GFIEMVEMIHAFVFIN------GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NI 452
           GF+      H  +F+       G+I  I+    +I    +   ++ AY+I   M  + N 
Sbjct: 435 GFVS-----HGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANP 489

Query: 453 ITWNTLINGFLLNG 466
           + W  L+    L+G
Sbjct: 490 VVWRALLGACRLHG 503



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 163/382 (42%), Gaps = 58/382 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   ++ G   +AL +F ++H    + P  ++++  L+  A+  +   G  +H   +
Sbjct: 180 NAMINGYAKIGCLDEALEVFRRMHVK-GVAPSRFTITGILSVFASRGDLDNGKTVHGIVM 238

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V+N ++ +Y   + +     +F  I   D++SW + +S   + G  D    
Sbjct: 239 KMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLR 298

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           +FDKM                      +G G+  ++          +  +VL  C     
Sbjct: 299 LFDKM----------------------LGSGILPDL---------VTITTVLPACSHLAA 327

Query: 204 LEFGRQLHSLVTKSGF----------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L  GR++H  +  +G           + LVS  NA++ MY  CG++ +A K+F+      
Sbjct: 328 LMHGREIHGYMIINGLGKDDENGAVDNLLVS--NAVMDMYAKCGSMNNALKIFDSMSKK- 384

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            D  S+N+M+ G    G   EAL  F  M  A  +P+E+T V V+SA  C   G+  H +
Sbjct: 385 -DVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSA--CNHAGFVSHGR 441

Query: 314 ----AMKSGFEAYTSVSN--AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQ 366
                M+S F    ++ +    I M    G +++A  I  ++  + + V W  ++   A 
Sbjct: 442 LFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLG--AC 499

Query: 367 RNLGRSAILAYLEMQSVGIRPD 388
           R  G + +      Q + + P+
Sbjct: 500 RLHGNAELAEIAARQVLQLEPE 521


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 327/622 (52%), Gaps = 15/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D   W   L      G +  A +VFD++P  D   YNA+I   +  G     I L+R M 
Sbjct: 32  DNKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSML 91

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              V  + Y+F  VL  C A   L  GR +H+     G    + V  ALI +Y  C    
Sbjct: 92  YFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFG 151

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMS 299
            A  VF  AK  + D +++N M+ G A+ G    A+    DM     LRP+  T VS++ 
Sbjct: 152 PAANVF--AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLP 209

Query: 300 ACLCPRVGYQ---VHAQAMKSGF---EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
                   +Q   VHA  +++     E    +  A + MY+ C  +  AC +F  +  ++
Sbjct: 210 LLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRN 269

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLL---ASSGFIEMVEMIH 409
            V+W+ +I  +   +    A   + +M   G+      +  S L   AS   + M   +H
Sbjct: 270 EVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLH 329

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A +  +GI  ++   N+L+S YAK   I +A  +F  ++ ++ I++  L++G++ NG   
Sbjct: 330 ALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAE 389

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           +    F ++    ++PD  T+   + +C+ +++L+HG+  HG V+   L  + S+ N++I
Sbjct: 390 EAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLI 449

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAKCG +D S +VF+ M  +D +SWN +I+ Y  HG GKEA + F +M++ G  +PD 
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQG-FEPDD 508

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF  +++ACSH+GLV +G   FD+M + YG +P  +H  CM+DLL R G+LDEA + I 
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S  ++A    W AL  AC  H N+ LG+ ++ ++ +   +    +VLLSNI++AAG ++E
Sbjct: 569 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDE 628

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA +R + K  G  K PGCSWI
Sbjct: 629 AAEVRIIQKVKGFKKSPGCSWI 650



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 262/600 (43%), Gaps = 56/600 (9%)

Query: 31  LSRSGHYQDALHLFVQIHSS---HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L R+  ++   H  + ++ S    ++ P+ Y+    L AC+ L +   G  +HA+A   G
Sbjct: 70  LIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVG 129

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V+  ++ LY           VF+++   DV +W                     
Sbjct: 130 LHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAW--------------------- 168

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS-FASVLS-VCDAGLLE 205
                     NAM+ G   +G     I    +M      R N S   S+L  +   G L 
Sbjct: 169 ----------NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALF 218

Query: 206 FGRQLHSLVTKSGFSC---LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            G  +H+   ++        V +  AL+ MY  C ++V AC+VF      V + ++++ +
Sbjct: 219 QGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMT--VRNEVTWSAL 276

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCP-----RVGYQVHAQAMK 316
           + G     R+ EA   F+DMLV  +    L+  SV SA  +C      R+G Q+HA   K
Sbjct: 277 IGGFVLCDRMTEAFNLFKDMLVEGM--CFLSATSVASALRVCASLADLRMGTQLHALLAK 334

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG  A  +  N+ ++MY+  G I+EA M+F  +  KD +S+  ++S Y Q      A L 
Sbjct: 335 SGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLV 394

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK 433
           + +MQ+  ++PD  T  SL+ +   +  ++     H  V I G+     + N+LI  YAK
Sbjct: 395 FKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAK 454

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             RI  + Q+F  M  R+I++WNT+I G+ ++G   +    F  +      PD+ T    
Sbjct: 455 CGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICL 514

Query: 494 LSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEK 551
           +++C+    +  GK        K  ++ +M     M+ L A+ G LD + + + +M ++ 
Sbjct: 515 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKA 574

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D   W AL+ A   H          + +Q +G        F  + +  S AG  D+   +
Sbjct: 575 DVRVWGALLGACRIHKNIDLGKQVSRMIQKLG--PEGTGNFVLLSNIFSAAGRFDEAAEV 632



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 203/447 (45%), Gaps = 42/447 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  +  G Y  A+   + +     L+P+  +L + L   A       G  +HAY L
Sbjct: 169 NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCL 228

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD-VYSWTTFLSACTKMGHVDYAC 143
           RA L                              QN + V   T  L    K  H+ YAC
Sbjct: 229 RAYLD-----------------------------QNEEQVLIGTALLDMYAKCKHLVYAC 259

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVCDA- 201
            VF  M  R+   ++A+I G            LF++M    +      S AS L VC + 
Sbjct: 260 RVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASL 319

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
             L  G QLH+L+ KSG    ++  N+L++MY   G + +A  +F+E    + D ISY  
Sbjct: 320 ADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIA--IKDTISYGA 377

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++ G    G+ EEA + F+ M   +++P   T VS++ AC      + G   H   +  G
Sbjct: 378 LLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRG 437

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               TS+ N+ I MY+ CG+ID +  +F ++  +DIVSWNTMI+ Y    LG+ A   +L
Sbjct: 438 LALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFL 497

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFIN---GIITNIQVSNALISAYAKN 434
            M++ G  PD+ TF  L+A+     +V E  H F  +    GI+  ++    ++   A+ 
Sbjct: 498 SMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARG 557

Query: 435 ERIKQAYQIFHNMSPR-NIITWNTLIN 460
             + +AYQ   +M  + ++  W  L+ 
Sbjct: 558 GFLDEAYQFIQSMPLKADVRVWGALLG 584



 Score = 47.8 bits (112), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 19  ELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           E+ +K  IS    L+   ++G  ++A  +F ++ + + ++PDI ++ + + AC++L    
Sbjct: 366 EIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACN-VQPDIATMVSLIPACSHLAALQ 424

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G   H   +  GL     + N+++ +Y     +   ++VF ++   D+ SW T ++   
Sbjct: 425 HGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYG 484

Query: 135 KMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM-HKLDV--RR 187
             G    A  +F  M ++    D   +  +I  C+ +G    G   F  M HK  +  R 
Sbjct: 485 IHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRM 544

Query: 188 DNY 190
           ++Y
Sbjct: 545 EHY 547


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 178/515 (34%), Positives = 282/515 (54%), Gaps = 39/515 (7%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTF---VSVMSACLCPRVGYQV 310
           D +SYN ++ G +S G    ++  +R +L   S+RP+ +T    + V SA     +G+ V
Sbjct: 109 DAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSV 168

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-------------------- 350
           H Q ++ GF AY  V +  + MY+  G I +A  +F  ++                    
Sbjct: 169 HCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMI 228

Query: 351 -----------EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
                      ++D ++W TM++   Q  L   A+  +  M++ G+  D++TFGS+L + 
Sbjct: 229 EDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTAC 288

Query: 400 GFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G +   E  + IHA++       N+ V +AL+  Y+K   I+ A  +F  M+ RNII+W 
Sbjct: 289 GALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWT 348

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G+  N    + ++ FSE+ M  ++PD++TL   +SSCA ++SL  G Q H   L +
Sbjct: 349 AMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 408

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L+  +++ NA++TLY KCG ++ + R+F+ M   D +SW AL++ YAQ G+ KE +  F
Sbjct: 409 GLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLF 468

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M  V  +KPD  TF  VLSACS AGLV+ G   FDSM  D+  +P +DH +CM+DL  
Sbjct: 469 EKML-VNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYS 527

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R+G   EAE  I        +  W  L S+C   GN+ +G+  A  LLE +   P+ YVL
Sbjct: 528 RSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVL 587

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L +++AA G W E A++R  ++   V K+PGCSWI
Sbjct: 588 LCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWI 622



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 257/555 (46%), Gaps = 40/555 (7%)

Query: 48  HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNAR 106
           H++H L     ++ ++ A             +H   L+  L+A P  + N +L+ Y  + 
Sbjct: 3   HAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAKSG 62

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
            L   +RVF E+ +P++++    LSA      V     +F  MP+RD   YNA+ITG + 
Sbjct: 63  RLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGFSS 122

Query: 167 NGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS 224
            G     + L+R + + + VR    + ++++ V  A      G  +H  V + GF     
Sbjct: 123 TGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAYAF 182

Query: 225 VVNALITMYFNCGNVVDA------------------------CKVFEEAKGYVC-----D 255
           V + L+ MY   G + DA                        CK+ E+AKG        D
Sbjct: 183 VGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDRD 242

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            I++  M+ GL   G   EAL  FR M    +   + TF S+++AC        G Q+HA
Sbjct: 243 SITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHA 302

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
              ++ +E    V +A + MYS C  I  A  +F R+  ++I+SW  MI  Y Q      
Sbjct: 303 YITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSEE 362

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           A+ A+ EMQ  GI+PD+FT GS+++S   +  +E     H    ++G++  I VSNAL++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   I+ A+++F  MS  + ++W  L+ G+   G   + +  F ++L++ L+PD  T
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVT 482

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMM 548
               LS+C+R   +  G      + K++ I  +      MI LY++ G    +      M
Sbjct: 483 FIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQM 542

Query: 549 IE-KDTISWNALISA 562
               D   W  L+S+
Sbjct: 543 PHSPDAFGWATLLSS 557



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 224/459 (48%), Gaps = 27/459 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S +G    ++ L+  +     ++P   +LS  +   + L + A G+ +H   L
Sbjct: 114 NALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVL 173

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  AY  V + ++ +Y     +   +RVF E++   V  + T ++   +   ++ A  
Sbjct: 174 RLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKG 233

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +F  M DRD   +  M+TG T+NG +   + +FR M    V  D Y+F S+L+ C A   
Sbjct: 234 LFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 293

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVM 262
            E G+Q+H+ +T++ +   V V +AL+ MY  C ++  A  VF   +   C + IS+  M
Sbjct: 294 SEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVF---RRMTCRNIISWTAM 350

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           + G       EEA+  F +M +  ++P + T  SV+S+C        G Q H  A+ SG 
Sbjct: 351 IVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGL 410

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
             Y +VSNA +T+Y  CG I++A  +F  +   D VSW  +++ YAQ    +  I  + +
Sbjct: 411 MRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEK 470

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEM-------VEMIHAFVFINGIITNIQVSNALIS 429
           M   G++PD  TF  +L++   +G +E        ++  H  V I+   T       +I 
Sbjct: 471 MLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYT------CMID 524

Query: 430 AYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
            Y+++ R K+A +    M  SP +   W TL++   L G
Sbjct: 525 LYSRSGRFKEAEEFIKQMPHSP-DAFGWATLLSSCRLRG 562



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P  + L+  L++ A+   L   +++   +   NL ++    NA+++  A    +    R+
Sbjct: 46  PPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTR----NALLSALAHSRLVPDMERL 101

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA---VLSACSH 601
           F  M E+D +S+NALI+ ++  G    +V  ++A+     ++P + T +A   V SA S 
Sbjct: 102 FASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSD 161

Query: 602 AGLVDD-GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
             L      ++       Y F+      S ++D+  + G + +A RV   Q ++A++
Sbjct: 162 RALGHSVHCQVLRLGFGAYAFVG-----SPLVDMYAKMGLIRDARRVF--QEMEAKT 211


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 222/717 (30%), Positives = 345/717 (48%), Gaps = 42/717 (5%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           L  N  +  L   G +  AL  + ++  S+ + PD Y+    + AC  L N      +H 
Sbjct: 111 LPWNWMIRGLYMLGWFDFALLFYFKMLGSN-VSPDKYTFPYVIKACGGLNNVPLCMVVHN 169

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A   G      V + ++ LY +   +   +RVF                          
Sbjct: 170 TARSLGFHVDLFVGSALIKLYADNGYICDARRVF-------------------------- 203

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
                D++P RD  ++N M+ G  ++G  +  +G F  M       ++ ++  +LS+C  
Sbjct: 204 -----DELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICAT 258

Query: 202 -GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            G    G Q+H LV  SGF     V N L+ MY  CGN+ DA K+F        D +++N
Sbjct: 259 RGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQ--TDTVTWN 316

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS 317
            ++ G    G  +EA   F  M+ A ++P  +TF S + + L     R   +VH+  ++ 
Sbjct: 317 GLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRH 376

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
                  + +A I +Y   G ++ A  IF +    D+     MIS Y    L   AI  +
Sbjct: 377 RVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTF 436

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN 434
             +   G+ P+  T  S+L +   +  +   + +H  +    +   + V +A+   YAK 
Sbjct: 437 RWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKC 496

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            R+  AY+ F  MS  + I WN++I+ F  NG P   +  F ++ MS  + D  +LS AL
Sbjct: 497 GRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSAL 556

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           SS A + +L +GK++HGYV++N   S   + +A+I +Y+KCG L  +  VFN+M  K+ +
Sbjct: 557 SSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEV 616

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN++I+AY  HG  +E +  F  M   G + PD  TF  ++SAC HAGLV +G   F  
Sbjct: 617 SWNSIIAAYGNHGCARECLDLFHEMLRAG-VHPDHVTFLVIISACGHAGLVGEGIHYFHC 675

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  +YG     +H +CM+DL GRAG L EA   I S      +  W  L  AC  HGN+ 
Sbjct: 676 MTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVE 735

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L ++ +  LLE +      YVLLSN++A AG W     +R L+K  GV K PG SWI
Sbjct: 736 LAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWI 792



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 211/413 (51%), Gaps = 18/413 (4%)

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           S+   C DA +++  RQ+H+ +   G S + ++ + ++ +Y  CG + D   +F   +  
Sbjct: 49  SLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE-- 106

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPR 305
           +C+ + +N M+ GL  +G  + AL+ +  ML +++ P + TF  V+ AC       LC  
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLC-- 164

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
               VH  A   GF     V +A I +Y+  G I +A  +F  L ++D + WN M+  Y 
Sbjct: 165 --MVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYV 222

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
           +     +A+  +  M++     +  T+  +L   A+ G   +   +H  V  +G   + Q
Sbjct: 223 KSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQ 282

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+N L++ Y+K   +  A ++F+ M   + +TWN LI G++ NGF  +    F+ ++ + 
Sbjct: 283 VANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG 342

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           ++PD  T +  L S     SLRH K++H Y++++ +   + L +A+I +Y K GD++ + 
Sbjct: 343 VKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMAR 402

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           ++F      D     A+IS Y  HG   +A++ F+ +   G + P+  T  +V
Sbjct: 403 KIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMV-PNSLTMASV 454



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 169/344 (49%), Gaps = 7/344 (2%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           QVH Q +  G     ++S+  + +Y  CG+I +   +F  L+  + + WN MI       
Sbjct: 65  QVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLG 124

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
               A+L Y +M    + PD++TF  ++ + G +  V +   +H      G   ++ V +
Sbjct: 125 WFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGS 184

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALI  YA N  I  A ++F  +  R+ I WN +++G++ +G     +  F  +  S    
Sbjct: 185 ALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMV 244

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  T +  LS CA       G Q+HG V+ +       + N ++ +Y+KCG+L  + ++F
Sbjct: 245 NSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           N M + DT++WN LI+ Y Q+G   EA   F AM   G +KPD  TF + L +   +G +
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAG-VKPDSVTFASFLPSILESGSL 363

Query: 606 DDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVI 648
                +   +V     +P + +L S ++D+  + G ++ A ++ 
Sbjct: 364 RHCKEVHSYIVRHR--VPFDVYLKSALIDIYFKGGDVEMARKIF 405



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 3/270 (1%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           ++    +H  + + G+     +S+ ++  Y    RI     +F  +   N + WN +I G
Sbjct: 60  VQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRG 119

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
             + G+    L  + ++L S + PD+YT    + +C  ++++     +H           
Sbjct: 120 LYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVD 179

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + +G+A+I LYA  G +  + RVF+ + ++DTI WN ++  Y + G+   A+  F  M+ 
Sbjct: 180 LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRT 239

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
              +  +  T+T +LS C+  G    GT++   +V   GF       + ++ +  + G L
Sbjct: 240 SYSMV-NSVTYTCILSICATRGKFCLGTQV-HGLVIGSGFEFDPQVANTLVAMYSKCGNL 297

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHG 671
            +A ++ N+   Q  +  W  L +    +G
Sbjct: 298 FDARKLFNTMP-QTDTVTWNGLIAGYVQNG 326


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 213/681 (31%), Positives = 345/681 (50%), Gaps = 42/681 (6%)

Query: 59   SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
            + +T  ++C  L +   G Q+  + ++ G +    VAN+++S++ +          FS +
Sbjct: 949  TFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSS----------FSSV 998

Query: 119  QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            +                      AC VFD M + D+  +NAMI+    +G     +  F 
Sbjct: 999  EE---------------------ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFH 1037

Query: 179  EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
             M  L    ++ + +S+LSVC +   L++GR +H LV K G    V + N L+T+Y   G
Sbjct: 1038 WMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAG 1097

Query: 238  NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
               DA  VF+       D IS+N MM      G+  + L    ++L      + +TF S 
Sbjct: 1098 RSEDAELVFQAMTER--DLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASA 1155

Query: 298  MSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
            ++AC  P    +   VHA  + +GF  +  V NA +TMY   G + EA  +   + + D 
Sbjct: 1156 LAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR 1215

Query: 355  VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVEMIHA 410
            V+WN +I  +A+      A+ AY  ++  GI  +  T  S+L    A    ++    IHA
Sbjct: 1216 VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHA 1275

Query: 411  FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
             + + G  ++  V N+LI+ YAK   +  +  IF  +  ++ ITWN ++     +G   +
Sbjct: 1276 HIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEE 1335

Query: 471  GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
             L+ F E+    +  D+++ S  L++ A ++ L  G+Q+HG V+K    S + + NA + 
Sbjct: 1336 ALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMD 1395

Query: 531  LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
            +Y KCG++   L++    I +  +SWN LISA+A+HG  ++A   F  M  +G  KPD  
Sbjct: 1396 MYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP-KPDHV 1454

Query: 591  TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            TF ++LSAC+H GLVD+G   +DSM  ++G  P  +H  C++DLLGR+G L  AE  I  
Sbjct: 1455 TFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKE 1514

Query: 651  QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +      W +L +AC  HGNL L R  A  LLE +    S YVL SN+ A +G WE+ 
Sbjct: 1515 MPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDV 1574

Query: 711  ANIRELLKRTGVIKQPGCSWI 731
             N+R+ +    + KQP CSW+
Sbjct: 1575 ENLRKEMGSNNIKKQPACSWV 1595



 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 183/555 (32%), Positives = 292/555 (52%), Gaps = 11/555 (1%)

Query: 185 VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            R D   +  +L +C D    + G  +H+ +  +GF   + +   LI  Y   G+V+ A 
Sbjct: 26  TRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAAR 85

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
            VF+         +S+  M+ G +  GR E+A + F DM    ++ ++ T+ S + AC  
Sbjct: 86  NVFDGMPERSV--VSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTS 143

Query: 303 --CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
             C  +G QV     K  F     V +A +  +S CGK+++A  +F  + E+D+VSWN M
Sbjct: 144 LRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAM 203

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           I  YA +     +   +  M   G+ PD +T GS+L   A  G + +   IH  +   G 
Sbjct: 204 IGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG-FPVQGLQHFS 476
            +   V+  LI+AYAKN  ++ A  +   M  +++ +   LI G+   G + V  L  F 
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           E+    +  D+  L   L+ CA ++S   G QIH + LK      +++GNA+I +YAK G
Sbjct: 324 EMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSG 383

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +++ + R F+ M EK+ ISW +LIS YA+HG G  AVS +K M+  G  KP+  TF ++L
Sbjct: 384 EIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKG-FKPNDVTFLSLL 442

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            ACSH GL  +G   F++MVN Y   P  +H SCM+DL  R G L+EA  ++    I+  
Sbjct: 443 FACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHN 502

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W A+  A + +G + LG+  A  L   + +    YV+L++IY+AAGLW++A  IR+L
Sbjct: 503 ASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKL 562

Query: 717 LKRTGVIKQPGCSWI 731
           ++     K  G S+ 
Sbjct: 563 MEERSTKKNAGYSFF 577



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 180/662 (27%), Positives = 330/662 (49%), Gaps = 52/662 (7%)

Query: 28   LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA-FGNQLHAYALRA 86
            L+   R G Y++A+ LF Q+     ++P+ + +++ + AC+     A  G Q+H + ++ 
Sbjct: 817  LSGYVRVGLYEEAVGLFCQMWGL-GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT 875

Query: 87   GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
            G+    +V   ++  Y +   + + +++F E+ + +V SWT+ +   +  G+        
Sbjct: 876  GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN-------- 927

Query: 147  DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE- 205
               P   L VY                    + M +  V  +  +FA+V S C  GLLE 
Sbjct: 928  ---PGEVLNVY--------------------QRMRQEGVSGNQNTFATVTSSC--GLLED 962

Query: 206  --FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               G Q+   + + GF   VSV N+LI+M+ +  +V +AC VF+      CD IS+N M+
Sbjct: 963  QVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMN--ECDIISWNAMI 1020

Query: 264  DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
               A  G   E+L  F  M       +  T  S++S C      + G  +H   +K G +
Sbjct: 1021 SAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080

Query: 321  AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            +   + N  +T+YS  G+ ++A ++F  + E+D++SWN+M++ Y Q       +    E+
Sbjct: 1081 SNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAEL 1140

Query: 381  QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              +G   +  TF S LA+    E +   +++HA + + G    + V NAL++ Y K   +
Sbjct: 1141 LQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMM 1200

Query: 438  KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY-TLSVALSS 496
             +A ++   M   + +TWN LI G   N  P + ++ + +L+  +  P  Y T+   L +
Sbjct: 1201 MEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAY-KLIREKGIPANYITMVSVLGA 1259

Query: 497  CARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C+     L+HG  IH +++     S   + N++IT+YAKCGDL+ S  +F+ +  K  I+
Sbjct: 1260 CSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPIT 1319

Query: 556  WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            WNA+++A A HG G+EA+  F  M++VG +  DQ +F+  L+A ++  ++++G ++   +
Sbjct: 1320 WNAMVAANAHHGCGEEALKIFGEMRNVG-VNLDQFSFSGGLAATANLAVLEEGQQL-HGL 1377

Query: 616  VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            V   GF       +  +D+ G+ G + +  +++  Q I     +W  L SA A HG  + 
Sbjct: 1378 VIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNILISAFARHGCFQK 1436

Query: 676  GR 677
             R
Sbjct: 1437 AR 1438



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 165/564 (29%), Positives = 298/564 (52%), Gaps = 20/564 (3%)

Query: 120  NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
            N  ++   T ++  +K G++++A  VFD+M  R+   ++ M++G    G  +  +GLF +
Sbjct: 776  NLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQ 835

Query: 180  MHKLDVRRDNYSFASVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M  L V  + +  AS+++ C     + + G Q+H  V K+G    V V  AL+  Y + G
Sbjct: 836  MWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIG 895

Query: 238  NVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
             V +A K+FEE    + DH  +S+  +M G +  G   E L  ++ M    +  ++ TF 
Sbjct: 896  LVYNAQKLFEE----MPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFA 951

Query: 296  SVMSAC--LCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
            +V S+C  L  +V GYQV    ++ GFE   SV+N+ I+M+SS   ++EAC +F  + E 
Sbjct: 952  TVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 1011

Query: 353  DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IH 409
            DI+SWN MIS YA   L R ++  +  M+ +    +  T  SLL+    ++ ++    IH
Sbjct: 1012 DIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIH 1071

Query: 410  AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
              V   G+ +N+ + N L++ Y++  R + A  +F  M+ R++I+WN+++  ++ +G  +
Sbjct: 1072 GLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCL 1131

Query: 470  QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             GL+  +ELL      +  T + AL++C+    L   K +H  ++       + +GNA++
Sbjct: 1132 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 1191

Query: 530  TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            T+Y K G +  + +V   M + D ++WNALI  +A++ E  EAV  +K +++ G I  + 
Sbjct: 1192 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKG-IPANY 1250

Query: 590  ATFTAVLSACSHA-GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             T  +VL ACS    L+  G  I   +V   GF   +   + ++ +  + G L+ +  + 
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLT-GFESDDYVKNSLITMYAKCGDLNSSNYIF 1309

Query: 649  NSQHIQARSD-NWWALFSACAAHG 671
            +   +  +S   W A+ +A A HG
Sbjct: 1310 DG--LGNKSPITWNAMVAANAHHG 1331



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 250/507 (49%), Gaps = 20/507 (3%)

Query: 207  GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            G+ LH+       +  +   N LI MY   GN+  A  VF+E +    +  S++ M+ G 
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHR--NEASWSTMLSGY 820

Query: 267  ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAY 322
              VG  EEA+  F  M    + P+     S+++AC         G+QVH   +K+G    
Sbjct: 821  VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 880

Query: 323  TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
              V  A +  Y S G +  A  +F  + + ++VSW +++  Y+        +  Y  M+ 
Sbjct: 881  VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940

Query: 383  VGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             G+  ++ TF ++ +S G +E   +   +   +   G   ++ V+N+LIS ++    +++
Sbjct: 941  EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000

Query: 440  AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
            A  +F +M+  +II+WN +I+ +  +G   + L+ F  +       +  TLS  LS C+ 
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060

Query: 500  ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            + +L+ G+ IHG V+K  L S + + N ++TLY++ G  + +  VF  M E+D ISWN++
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120

Query: 560  ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
            ++ Y Q G+  + +     +  +G++  +  TF + L+ACS+   + + ++I  +++   
Sbjct: 1121 MACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIE-SKIVHALIIVA 1178

Query: 620  GFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            GF    D L   + ++ + G+ G + EA++V+ +   Q     W AL    A   N    
Sbjct: 1179 GF---HDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGGHAE--NEEPN 1232

Query: 677  RIIAGLLLEREQDKPSVYVLLSNIYAA 703
              +    L RE+  P+ Y+ + ++  A
Sbjct: 1233 EAVKAYKLIREKGIPANYITMVSVLGA 1259



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 238/507 (46%), Gaps = 28/507 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++  T  +    K+G V  A  VFD MP+R +  + AM++G ++NG  +    LF +M 
Sbjct: 64  DLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 123

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              V+ + +++ S L  C +   L+ G Q+   + K  F   + V +AL+  +  CG + 
Sbjct: 124 HCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKME 183

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA  +F        D +S+N M+ G A  G  +++   FR ML   L P   T  SV+ A
Sbjct: 184 DASYLFGTMMER--DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 241

Query: 301 CLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
                   +  Q+H    + G+ +Y  V+   I  Y+  G +  A  +   + +KD+ S 
Sbjct: 242 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 301

Query: 358 NTMISTYAQRNL-GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVF 413
             +I+ YA   +    A+  + EM  + I  D+    S+L   A+     +   IHAF  
Sbjct: 302 TALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFAL 361

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
                 ++ + NALI  YAK+  I+ A + F  M  +N+I+W +LI+G+  +G+    + 
Sbjct: 362 KYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVS 421

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLY 532
            + ++     +P++ T    L +C+       G +  +  V K N+  +    + M+ L+
Sbjct: 422 LYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLF 481

Query: 533 AKCGDLDCSLRVFNMM----IEKDTISWNALISAYAQHGE---GKEAVSCFKAMQDVGRI 585
           A+ G L+     +N++    I+ +   W A++ A + +G    GKEA S    MQ     
Sbjct: 482 ARQGLLE---EAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ----- 533

Query: 586 KPDQATFTAVLSAC-SHAGLVDDGTRI 611
            P+ +    VL++  S AGL DD  +I
Sbjct: 534 -PENSVNYVVLASIYSAAGLWDDAWKI 559



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 53/344 (15%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD Y+L + L A A        NQ+H    + G  +Y  V   +++ Y     L S K
Sbjct: 228 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 287

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YED 171
            +   +   D++S T                               A+ITG    G Y  
Sbjct: 288 DLRKGMLKKDLFSST-------------------------------ALITGYAHEGIYSV 316

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNAL 229
             + LF+EM+++++  D+    S+L++C A L  F  G Q+H+   K   S  V++ NAL
Sbjct: 317 DALDLFKEMNQMNIGMDDVILCSMLNIC-ANLASFALGTQIHAFALKYQPSYDVAMGNAL 375

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY   G + DA + F+E +    + IS+  ++ G A  G    A+  ++ M     +P
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEK--NVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKP 433

Query: 290 SELTFVSVMSACL--------CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           +++TF+S++ AC         C      V+   +K   E Y+ +    + +++  G ++E
Sbjct: 434 NDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCM----VDLFARQGLLEE 489

Query: 342 ACMIFARLQEKDIVS-WNTMI---STYAQRNLGRSAILAYLEMQ 381
           A  +  ++  K   S W  ++   S Y   +LG+ A      MQ
Sbjct: 490 AYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ 533



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DAL LF +++  +    D+  L + L  CANL + A G Q+HA+AL+        + N +
Sbjct: 317 DALDLFKEMNQMNIGMDDVI-LCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 375

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP--- 155
           + +Y  + ++   KR F E++  +V SWT+ +S   K G+   A  ++ KM  +      
Sbjct: 376 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPND 435

Query: 156 -VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
             + +++  C+  G    G   F  M   + +  R ++YS
Sbjct: 436 VTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYS 475



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 5/162 (3%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N  +A  +  G  ++AL +F ++ +   +  D +S S  LAA ANL     G QLH   +
Sbjct: 1321 NAMVAANAHHGCGEEALKIFGEMRNV-GVNLDQFSFSGGLAATANLAVLEEGQQLHGLVI 1379

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            + G ++  HV N  + +Y    ++  V ++  +  N    SW   +SA  + G    A E
Sbjct: 1380 KLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARE 1439

Query: 145  VFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
             F +M    P  D   + ++++ C   G  D G+  +  M +
Sbjct: 1440 TFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTR 1481



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 70/123 (56%), Gaps = 2/123 (1%)

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  L   + I+S   GK +H + +  ++   +   N +I +Y+K G+++ +  VF+ M 
Sbjct: 747 VNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMR 806

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG-LVDDG 608
            ++  SW+ ++S Y + G  +EAV  F  M  +G ++P+     ++++ACS +G + D+G
Sbjct: 807 HRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLG-VEPNGFMVASLITACSRSGYMADEG 865

Query: 609 TRI 611
            ++
Sbjct: 866 FQV 868


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  331 bits (848), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 203/594 (34%), Positives = 325/594 (54%), Gaps = 32/594 (5%)

Query: 161 ITGCTENGYEDIGIGLFREMHKL-DVRRDNY-----SFASVLSVCDAGLLEFGRQLHSLV 214
           + G     + +    LF +M+ + DV  ++Y     SF    S+ +   L+ GR++H  V
Sbjct: 1   MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE-YSLAEQVGLKKGREVHGHV 59

Query: 215 TKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-----DHISYNVMMDGLAS 268
             +G    +V + N L+ MY  CG++ DA +VF       C     D +S+N M+ GL  
Sbjct: 60  ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-------CFMMEKDSVSWNSMITGLDQ 112

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSV 325
            G   EA+ R++ M    + P   T +S +S+C      ++G Q+H +++K G +   SV
Sbjct: 113 NGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 172

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--QRNLGRSAILAYLEMQSV 383
           SNA +T+Y+  G ++E   IF+ + E D VSWN++I   A  +R+L   A+  +L     
Sbjct: 173 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPE-AVACFLNALRA 231

Query: 384 GIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G + +  TF S+L++     F E+ + IH       I       NALI+ Y K   +   
Sbjct: 232 GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGC 291

Query: 441 YQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
            +IF  MS R + +TWN++I+G++ N    + L     +L +  R D +  +  LS+ A 
Sbjct: 292 EKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFAS 351

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +++L  G ++H   ++  L S + +G+A++ +Y+KCG LD +LR FN M  +++ SWN++
Sbjct: 352 VATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSM 411

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           IS YA+HG+G+EA+  F  M+  G+  PD  TF  VLSACSHAGL+++G + F+SM + Y
Sbjct: 412 ISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY 471

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA-AHG-NLRLGR 677
           G  P  +H SCM DLLGRAG LD+ E  I+   ++     W  +  AC  A+G    LG+
Sbjct: 472 GLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGK 531

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A +L + E +    YVLL N+YAA G WE+    R+ +K   V K+ G SW+
Sbjct: 532 KAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 585



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 272/596 (45%), Gaps = 58/596 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSL------STTLAACANLRNAAFGNQLHA 81
           +  L R    ++A  LF+ ++S   + P+ Y +        +LA    L+    G ++H 
Sbjct: 1   MVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKK---GREVHG 57

Query: 82  YALRAGLKAY-PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           + +  GL  +   + N ++++Y     +   +RVF  +   D  SW              
Sbjct: 58  HVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSW-------------- 103

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                            N+MITG  +NG     +  ++ M + ++   +++  S LS C 
Sbjct: 104 -----------------NSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCA 146

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +    + G+Q+H    K G    VSV NAL+T+Y   G + +  K+F     +  D +S+
Sbjct: 147 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEH--DQVSW 204

Query: 260 NVMMDGLASVGR-VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           N ++  LAS  R + EA+  F + L A  + + +TF SV+SA        +G Q+H  A+
Sbjct: 205 NSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 264

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAI 374
           K       +  NA I  Y  CG++D    IF+R+ E +D V+WN+MIS Y    L   A+
Sbjct: 265 KYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKAL 324

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAY 431
                M   G R D F + ++L++   +  +E    +HA      + +++ V +AL+  Y
Sbjct: 325 DLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMY 384

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL 490
           +K  R+  A + F+ M  RN  +WN++I+G+  +G   + L+ F+ + L  +  PD  T 
Sbjct: 385 SKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTF 444

Query: 491 SVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF--NM 547
              LS+C+    L  G K          L  ++   + M  L  + G+LD  L  F   M
Sbjct: 445 VGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELD-KLEDFIDKM 503

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            ++ + + W  ++ A  +   G++A    KA + + +++P+ A    +L     AG
Sbjct: 504 PVKPNVLIWRTVLGACCR-ANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 558



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 209/477 (43%), Gaps = 52/477 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L ++G + +A+  + Q    H++ P  ++L ++L++CA+L+ A  G Q+H  +L
Sbjct: 104 NSMITGLDQNGCFIEAVERY-QSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESL 162

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G+     V+N +++LY     L   +++FS +   D  SW + + A            
Sbjct: 163 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAS--------- 213

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                 +R LP   A    C  N          R   KL    +  +F+SVLS   +   
Sbjct: 214 -----SERSLPEAVA----CFLNA--------LRAGQKL----NRITFSSVLSAVSSLSF 252

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            E G+Q+H L  K   +   +  NALI  Y  CG  +D C+          D +++N M+
Sbjct: 253 GELGKQIHGLALKYNIADEATTENALIACYGKCGE-MDGCEKIFSRMSERRDDVTWNSMI 311

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFE 320
            G      + +AL     ML    R     + +V+SA         G +VHA ++++  E
Sbjct: 312 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 371

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V +A + MYS CG++D A   F  +  ++  SWN+MIS YA+   G  A+  +  M
Sbjct: 372 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANM 431

Query: 381 QSVG-IRPDEFTFGSLLAS--------SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           +  G   PD  TF  +L++         GF     M  ++    G+   I+  + +    
Sbjct: 432 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY----GLAPRIEHFSCMADLL 487

Query: 432 AKNERIKQAYQIFHNMSPR-NIITWNTLINGFL-LNGFPVQGLQHFSELLMSELRPD 486
            +   + +       M  + N++ W T++      NG   +  +  +E+L  +L P+
Sbjct: 488 GRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF-QLEPE 543


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 205/641 (31%), Positives = 339/641 (52%), Gaps = 21/641 (3%)

Query: 103 KNARDLVSVKRVFSEIQ---NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           +  +DL SV+++   I    + +V+     + A  K G V  A   FD +  ++   + +
Sbjct: 35  RQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGS 94

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS- 217
           M+T   +NG+    + L++ M   D++ +   + +VL  C +   LE G+ +HS ++ + 
Sbjct: 95  MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G    V + N+L+TMY  CG++ DA ++FE   G      S+N M+   A  G  EEA+ 
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVS--SWNAMIAAYAQSGHFEEAIR 209

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            + DM V    PS  TF SV+SAC    +   G ++HA     G E   S+ NA +TMY+
Sbjct: 210 LYEDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 266

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C  +D+A  IF RL  +D+VSW+ MI+ +A+ +L   AI  Y +MQ  G+RP+ +TF S
Sbjct: 267 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 326

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   AS G +     +H  +  NG    +    AL+  Y     + +A  +F  +  R+
Sbjct: 327 VLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRD 386

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DEYTLSVALSSCARISSLRHGKQIH 510
              W  LI G+   G     L+ + E+  +   P  +   S  +S+CA + +    +Q H
Sbjct: 387 EGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH 446

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             +  + +IS   L  +++ +Y++ G+L+ + +VF+ M  +DT++W  LI+ YA+HGE  
Sbjct: 447 SDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHG 506

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            A+  +K M+  G  +P + TF  VL ACSHAGL + G ++F S+ +DY   P   H SC
Sbjct: 507 LALGLYKEMELEG-AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSC 565

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           ++DLL RAG L +AE +IN+  ++     W +L  A   H +++     AG + + +   
Sbjct: 566 IIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVD 625

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           P+ YVLLSN++A  G     A++R  +   GV K+ G SWI
Sbjct: 626 PASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWI 666



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 268/575 (46%), Gaps = 59/575 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY-ALRA 86
           L   +++GHY+ AL L+ ++     L+P+    +T L ACA+++    G  +H+  +   
Sbjct: 96  LTAYAQNGHYRAALDLYKRM----DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           GLK    + N++L++Y     L   KR+F  +    V SW   ++A  + GH + A  ++
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLY 211

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLE 205
           + M                                  DV     +F SVLS C + GLL+
Sbjct: 212 EDM----------------------------------DVEPSVRTFTSVLSACSNLGLLD 237

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR++H+L++  G    +S+ NAL+TMY  C  + DA K+F+       D +S++ M+  
Sbjct: 238 QGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRR--DVVSWSAMIAA 295

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
            A     +EA+  +  M +  +RP+  TF SV+ AC      R G  VH Q + +G++  
Sbjct: 296 FAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKIT 355

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
                A + +Y+S G +DEA  +F +++ +D   W  +I  Y+++      +  Y EM++
Sbjct: 356 LVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKN 415

Query: 383 VGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               P      S +    AS G        H+ +  +G+I++  ++ +L++ Y++   ++
Sbjct: 416 TTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLE 475

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A Q+F  MS R+ + W TLI G+  +G     L  + E+ +    P E T  V L +C+
Sbjct: 476 SARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACS 535

Query: 499 RISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKD 552
                  GKQ+       Y +  N+       + +I L ++ G L  +  + N M +E +
Sbjct: 536 HAGLQEQGKQLFISIQSDYAMHPNIAHY----SCIIDLLSRAGRLSDAEELINAMPVEPN 591

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            ++W++L+ A   H + K A      +  +  + P
Sbjct: 592 DVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDP 626



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 218/470 (46%), Gaps = 61/470 (12%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           +R+   ++G S +S       N  +A  ++SGH+++A+ L+  +     ++P + + ++ 
Sbjct: 177 KRLFERMSGRSVSS------WNAMIAAYAQSGHFEEAIRLYEDM----DVEPSVRTFTSV 226

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L+AC+NL     G ++HA     G +    + N +L++Y   + L    ++F  +   DV
Sbjct: 227 LSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDV 286

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW+  ++A  +    D A E + KM           + G                    
Sbjct: 287 VSWSAMIAAFAETDLFDEAIEFYSKM----------QLEG-------------------- 316

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            VR + Y+FASVL  C   G L  GR +H  +  +G+   +    AL+ +Y + G++ +A
Sbjct: 317 -VRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEA 375

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP-SELTFVSVMSAC 301
             +F++ +    D   + V++ G +  G     L  +R+M   +  P +++ +  V+SA 
Sbjct: 376 RSLFDQIENR--DEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISA- 432

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSN-----AAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C  +G    A+   S  EA   +S+     + + MYS  G ++ A  +F ++  +D ++
Sbjct: 433 -CASLGAFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLA 491

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVF 413
           W T+I+ YA+      A+  Y EM+  G  P E TF  +L   + +G  E  + +  F+ 
Sbjct: 492 WTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQL--FIS 549

Query: 414 IN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
           I     +  NI   + +I   ++  R+  A ++ + M    N +TW++L+
Sbjct: 550 IQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599


>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 655

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 302/548 (55%), Gaps = 25/548 (4%)

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G L  G+QLH+ + K GF  ++S+ N ++++Y  C    DA K+FEE    V + +S+N+
Sbjct: 74  GYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELP--VRNVVSWNI 131

Query: 262 MMDGLASVGRVEE--------ALIRFRDMLVASLRPSELTFVSVMSACLCPR-----VGY 308
           M+   ASVGR +E            FR ML+  + P  +TF  ++  CLC +     +G 
Sbjct: 132 MIR--ASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLI--CLCTQFNDIEMGV 187

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+H   +K GF+    V  A + +Y+ CG ++ A  +F  +  +D+V WN M+S Y   +
Sbjct: 188 QLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNS 247

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLA-----SSGFIEMVEMIHAFVFINGIITNIQV 423
           L   A   +  M+   +  DEFTF SLL+     +  + +  + +H+ V      +++ V
Sbjct: 248 LPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLV 307

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           ++ALI+ YAK+E I  A ++F  MS RN++ WNT+I GF  +G   + ++   E+L    
Sbjct: 308 ASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGF 367

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            PDE T+S  +SSC   S++    Q+H + +K +    +S+ N++I+ Y+KCG +  + +
Sbjct: 368 LPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFK 427

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F +  + D ++W +LI AYA HG  +++   F+ M   G IKPD+  F  VLSAC+H G
Sbjct: 428 CFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG-IKPDRIAFLGVLSACAHCG 486

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV  G   F  M N Y  +P  +H +C++DLLGR G ++EA  ++ S  I+  SD   A 
Sbjct: 487 LVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAF 546

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             +C  H N+ L ++ A  L   E +K   Y ++SNI+A+   W +   IR+ ++     
Sbjct: 547 IGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDA 606

Query: 724 KQPGCSWI 731
           K PGCSWI
Sbjct: 607 KVPGCSWI 614



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 238/535 (44%), Gaps = 45/535 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G QLHA+ ++ G      + N ILS+Y   ++    K++F E+   +V SW   + A   
Sbjct: 79  GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA--S 136

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
           +G  D                         E+    +    FR M    +  D+ +F  +
Sbjct: 137 VGRNDE-----------------------NESSGMRLCFSYFRRMLLEMMVPDHITFNGL 173

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           + +C     +E G QLH    K GF     V  AL+ +Y  CG V +A +VF +      
Sbjct: 174 ICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCR-- 231

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS-----ACLCPRVGYQ 309
           D + +NVM+         EEA   F  M +  +   E TF S++S     A      G Q
Sbjct: 232 DLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQ 291

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH+  ++  F++   V++A I MY+    I +A  +F  +  +++V+WNTMI  +     
Sbjct: 292 VHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGD 351

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNA 426
           G   +    EM   G  PDE T  S+++S G+   +     +HAF         + V+N+
Sbjct: 352 GNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANS 411

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LISAY+K   I  A++ F   S  +++TW +LI  +  +G   +  + F ++L   ++PD
Sbjct: 412 LISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPD 471

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNN---LISKMSLGNAMITLYAKCGDLDCSLR 543
                  LS+CA    +  G  +H + L  N   ++        ++ L  + G ++ +  
Sbjct: 472 RIAFLGVLSACAHCGLVTKG--LHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFE 529

Query: 544 VF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +  +M IE D+ +  A I +   H   + A     A + +  I+P+++   AV+S
Sbjct: 530 ILRSMPIEVDSDTLGAFIGSCKLHSNMELAK---LAAEKLFLIEPEKSVNYAVMS 581



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 191/409 (46%), Gaps = 55/409 (13%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD  + +  +  C    +   G QLH + ++ G      V   ++ LY     + + +RV
Sbjct: 165 PDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRV 224

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F ++   D+  W   +S           C VF+ +P+    V+N+M              
Sbjct: 225 FCDVSCRDLVMWNVMVS-----------CYVFNSLPEEAFRVFNSM-------------- 259

Query: 175 GLFREMHKLD-VRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALI 230
                  +LD V  D ++F+S+LSV     LE   FG+Q+HSLV +  F   V V +ALI
Sbjct: 260 -------RLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALI 312

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY    N++DA +VF+E    + + +++N M+ G  + G   E +   ++ML     P 
Sbjct: 313 NMYAKSENIIDARRVFDEMS--IRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPD 370

Query: 291 ELTFVSVMSACLCPRVGY--------QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           ELT  S++S+C     GY        QVHA A+K   + + SV+N+ I+ YS CG I  A
Sbjct: 371 ELTISSIISSC-----GYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSA 425

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
              F    + D+V+W ++I  YA   L   +   + +M S GI+PD   F  +L++    
Sbjct: 426 FKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHC 485

Query: 403 EMV-EMIHAFVFING---IITNIQVSNALISAYAKNERIKQAYQIFHNM 447
            +V + +H F  +     I+ + +    L+    +   I +A++I  +M
Sbjct: 486 GLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSM 534



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 129/266 (48%), Gaps = 10/266 (3%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A  G++   + +HA +   G    + + N ++S Y K +  + A ++F  +  RN+++WN
Sbjct: 71  AKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWN 130

Query: 457 TLINGFLLNGFPVQG------LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
            +I   +      +         +F  +L+  + PD  T +  +  C + + +  G Q+H
Sbjct: 131 IMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLH 190

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
            + +K        +G A++ LYAKCG ++ + RVF  +  +D + WN ++S Y  +   +
Sbjct: 191 CFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPE 250

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL--VDDGTRIFDSMVNDYGFIPAEDHL 628
           EA   F +M+ +  +  D+ TF+++LS  S   L   D G ++  S+V    F       
Sbjct: 251 EAFRVFNSMR-LDVVNGDEFTFSSLLSVISDDALEYYDFGKQV-HSLVLRQSFDSDVLVA 308

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQ 654
           S ++++  ++  + +A RV +   I+
Sbjct: 309 SALINMYAKSENIIDARRVFDEMSIR 334



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 101/231 (43%), Gaps = 29/231 (12%)

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL--SVALSSCARISSLRHGKQIHGY 512
           WN+  +  L    P+    HF++       P+   L  S AL   A+   L  GKQ+H +
Sbjct: 35  WNS--SSRLRASMPIPNQTHFND-------PNTVHLFCSNALKISAKKGYLPEGKQLHAH 85

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           ++K      +SL N ++++Y KC + + + ++F  +  ++ +SWN +I A     +  E+
Sbjct: 86  LIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENES 145

Query: 573 VS---CFKAMQD--VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
                CF   +   +  + PD  TF  ++  C+    ++ G ++    V   GF      
Sbjct: 146 SGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVK-VGF-----D 199

Query: 628 LSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           L C     ++ L  + G+++ A RV     +  R    W +  +C    +L
Sbjct: 200 LDCFVGCALVGLYAKCGFVENARRVFCD--VSCRDLVMWNVMVSCYVFNSL 248


>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 219/691 (31%), Positives = 332/691 (48%), Gaps = 73/691 (10%)

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +N  L+    +  L + +R+F  + + +  S+   LSA  + G +  A  +FD++P R+ 
Sbjct: 14  SNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRNT 73

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             +NAMI  C+++G       LF  M      RD +S+  ++S C A   E G    +L 
Sbjct: 74  VSWNAMIAACSDHGRVADARDLFDAMPA----RDGFSWTLMVS-CYARAGELGLARDALD 128

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
              G  C  +  NA+I+ Y   G   DA  +  E      D IS+N ++ GL   G +  
Sbjct: 129 RMPGDKC-TACYNAMISGYAKHGRFDDAVALLREMP--APDIISWNSVLVGLTRNGEMVR 185

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI-TMY 333
           A+  F +M    +    L     +      R G    A  + +G  +   VS   +   Y
Sbjct: 186 AVKFFDEMPARDMVSWNLMLEGYV------RAGDVDSAAGLFAGVPSPNVVSWVTLLNGY 239

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM------------- 380
              G+I EA  +F R+ ++++ +WN M+S Y + +    A   + EM             
Sbjct: 240 CRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMIS 299

Query: 381 --------QSVGIRPDEFTFGSLLAS---------------------------------- 398
                   Q      D+  F S  A                                   
Sbjct: 300 ALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAVCWNTM 359

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            SG++    +  A V    +     VS N +I+ YA + ++++A  IF  M+ RN ++WN
Sbjct: 360 ISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTVSWN 419

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++I+GF+ NG  V+ LQHF  +     R D  T +  LS+CA +++L  G+Q H  + ++
Sbjct: 420 SVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARS 479

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
             I     GNA+I+ YAKCG +  + +VF+ M   D +SWNALI  YA +G G EA+S F
Sbjct: 480 GYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVF 539

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M+D   ++PD+ TF  VLSACSHAGL+D+G   F+SM  DY   P  +H +CM+DLLG
Sbjct: 540 REMED-NDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLG 598

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R+G L EA  +I    +Q  +  W A+  AC  H N  L ++ A  L E E  K S YVL
Sbjct: 599 RSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVL 658

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           LSNI A AG W+EA N+R  +K  GV K PG
Sbjct: 659 LSNITAEAGKWDEAQNMRVFIKERGVHKTPG 689



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 5/162 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   ++G   +AL  FV +    K + D  + +  L+ACA+L     G Q H+   
Sbjct: 419 NSVISGFVQNGLCVEALQHFVLMRRDAK-RADWSTYACCLSACADLAALHVGRQFHSLLA 477

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+G        N ++S Y     ++  ++VF E+  PD+ SW   +      GH   A  
Sbjct: 478 RSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAIS 537

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
           VF +M D D+      +  +++ C+  G  D G   F  M K
Sbjct: 538 VFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTK 579


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 214/686 (31%), Positives = 348/686 (50%), Gaps = 48/686 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +LS  L AC ++ +   G QLH   ++ G                            
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGH--------------------------- 130

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                 +V + T+ +    K G V    EVF+ MP +++  + +++TGC         + 
Sbjct: 131 ---DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 176 LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF  M    +  + ++FASVLS V   G L+ G+++H+   K G    V V N+L+ MY 
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG V DA  VF   +    D +S+N +M GL       EAL  F +      + ++ T+
Sbjct: 248 KCGLVEDAKSVFNWMETR--DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTY 305

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ- 350
            +V+  C   +   +  Q+H+  +K GF    +V  A    YS CG++ +A  IF+    
Sbjct: 306 ATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTG 365

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
            +++VSW  +IS   Q      A++ +  M+   + P+EFT+ ++L +S  I +   IHA
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI-LPPQIHA 424

Query: 411 FVFINGIITNIQ----VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            V    I TN Q    V  AL+++Y+K    + A  IF  +  ++++ W+ +++     G
Sbjct: 425 QV----IKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS-LRHGKQIHGYVLKNNLISKMSLG 525
                   F+++ +  ++P+E+T+S  + +CA  S+ +  G+Q H   +K      + + 
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVS 540

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A++++Y++ G++D +  VF    ++D +SWN++IS YAQHG   +A+  F+ M+  G I
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG-I 599

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           + D  TF AV+  C+H GLV +G + FDSMV D+   P  +H +CM+DL  RAG LDE  
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I      A +  W  L  AC  H N+ LG+  A  LL  E    S YVLLSNIYAAAG
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAG 719

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E   +R+L+    V K+ GCSWI
Sbjct: 720 KWKERDEVRKLMDYRKVKKEAGCSWI 745



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/546 (23%), Positives = 258/546 (47%), Gaps = 41/546 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   + +  + + + LF ++ +   + P+ ++ ++ L+A A+      G ++HA +++ G
Sbjct: 173 LTGCAHAQMHSEVMALFFRMRA-EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFG 231

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V N+++++Y     +   K VF+ ++  D+ SW                     
Sbjct: 232 CRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSW--------------------- 270

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                     N ++ G   N  E   + LF E      +    ++A+V+ +C +   L  
Sbjct: 271 ----------NTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            RQLHS V K GF    +V+ AL   Y  CG + DA  +F    G   + +S+  ++ G 
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR-NVVSWTAIISGC 379

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
              G +  A++ F  M    + P+E T+ +++ A L   +  Q+HAQ +K+ ++    V 
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL-SILPPQIHAQVIKTNYQHIPFVG 438

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A +  YS  G  ++A  IF  +++KD+V+W+ M+S +AQ      A   + +M   GI+
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 387 PDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+EFT  S++      S  ++     HA          I VS+AL+S Y++   I  A  
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F   + R++++WN++I+G+  +G+ ++ ++ F ++  S ++ D  T    +  C     
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 503 LRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALI 560
           +  G+Q    +++++ I+  M     M+ LY++ G LD ++ +  +M      + W  L+
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678

Query: 561 SAYAQH 566
            A   H
Sbjct: 679 GACRVH 684



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 206/455 (45%), Gaps = 55/455 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
           ++  N  +A L  +    +AL LF +  ++  K+    Y+  T +  CANL+  A   QL
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA--TVIKLCANLKQLALARQL 324

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS-EIQNPDVYSWTTFLSACTKMGH 138
           H+  L+ G     +V   +   Y    +L     +FS    + +V SWT  +S C + G 
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384

Query: 139 VDYACEVFDKM-PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           +  A  +F +M  DR +P                                + ++++++L 
Sbjct: 385 IPLAVVLFSRMREDRVMP--------------------------------NEFTYSAMLK 412

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCD 255
              A L     Q+H+ V K+ +  +  V  AL+  Y   G+  DA  +F+  E K    D
Sbjct: 413 ---ASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQK----D 465

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVH 311
            ++++ M+   A  G  E A   F  M +  ++P+E T  SV+ AC CP  G     Q H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A ++K  +     VS+A ++MYS  G ID A ++F R  ++D+VSWN+MIS YAQ     
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFVFINGIITNIQVSNAL 427
            AI  + +M++ GI+ D  TF +++         +E  +   + V  + I   ++    +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 428 ISAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
           +  Y++  ++ +   +  +M  P   + W TL+  
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 3/195 (1%)

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N ++  +   G  ++ L  FS      +  D  TLS  L +C  +     G+Q+H   +K
Sbjct: 68  NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 516 -NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
             +   ++S G +++ +Y KCG +   + VF  M +K+ ++W +L++  A      E ++
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  M+  G I P+  TF +VLSA +  G +D G R+    V  +G   +    + ++++
Sbjct: 188 LFFRMRAEG-IWPNPFTFASVLSAVASQGALDLGQRVHAQSVK-FGCRSSVFVCNSLMNM 245

Query: 635 LGRAGYLDEAERVIN 649
             + G +++A+ V N
Sbjct: 246 YAKCGLVEDAKSVFN 260


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 288/534 (53%), Gaps = 10/534 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+ + K GF     + N LI MY  CG +  A +VF+       + +S+  +M
Sbjct: 20  LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER--NVVSWTALM 77

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRVGYQVHAQAMKSGFEAY 322
            G    G   E L  F +M  +   P+E T  + + AC    R G Q+H   +++GFE +
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH 137

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+N+ + MYS      +A  +F  +  +++ +WN+MIS YA    GR ++L + EMQ 
Sbjct: 138 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 197

Query: 383 V-GIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGI--ITNIQVSNALISAYAKNER 436
               +PDEFTF SLL A SG     E   +HA + + G+   +N  ++ AL+  Y K  R
Sbjct: 198 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHR 257

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A Q+F  +  RN I W T+I G    G   + +  F     S +R D + LS  ++ 
Sbjct: 258 LPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A  + +  GKQ+H Y  K      +S+ N+++ +Y KCG    + R F  M  ++ +SW
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 377

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            A+I+   +HG G+EA+  F+ MQ+ G ++ D+  + A+LSACSH+GLVD+  R F  + 
Sbjct: 378 TAMINGVGKHGHGREAIDLFEEMQEEG-VEADEVAYLALLSACSHSGLVDECRRYFSRIC 436

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D    P  +H +CM+DLLGRAG L EA+ +I S  ++     W  L SAC  H ++ +G
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 496

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           R +  +LL  + D P  YV+LSNI A AG W E   IR  ++R G+ KQ GCSW
Sbjct: 497 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSW 550



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 204/444 (45%), Gaps = 14/444 (3%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G +  A EVFD MP+R++  + A++ G   +G     + LF EM       + ++ +
Sbjct: 50  AKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLS 109

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           + L  C  G    G Q+H +  ++GF     V N+L+ MY       DA +VF+      
Sbjct: 110 ATLKACGGG-TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSR- 167

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CPRVGYQ 309
            +  ++N M+ G A  G+  ++L+ FR+M      +P E TF S++ AC      R G Q
Sbjct: 168 -NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQ 226

Query: 310 VHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           VHA     G    ++  ++ A + +Y  C ++  A  +F  L+ ++ + W T+I  +AQ 
Sbjct: 227 VHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQE 286

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVS 424
              + A+  +    S G+R D     S++   A    +E  + +H +        ++ V+
Sbjct: 287 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 346

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+L+  Y K     +A + F  M  RN+++W  +ING   +G   + +  F E+    + 
Sbjct: 347 NSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVE 406

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL-DCSL 542
            DE      LS+C+    +   ++    + ++  +   +   A M+ L  + G+L +   
Sbjct: 407 ADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 466

Query: 543 RVFNMMIEKDTISWNALISAYAQH 566
            + +M +E     W  L+SA   H
Sbjct: 467 LILSMPMEPTVGVWQTLLSACRVH 490



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 174/379 (45%), Gaps = 46/379 (12%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++ L LF ++  S    P+ ++LS TL AC     A  G Q+H   +R G + +  V
Sbjct: 84  GEARECLRLFGEMRGS-GTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDVV 140

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN+++ +Y   R     +RVF                               D +P R+L
Sbjct: 141 ANSLVVMYSKGRWTGDARRVF-------------------------------DVIPSRNL 169

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
             +N+MI+G    G     + +FREM +  D + D ++FAS+L  C   G    G Q+H+
Sbjct: 170 ATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHA 229

Query: 213 LVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            +   G S   + +   AL+ +Y  C  +  A +VF+  +    + I +  ++ G A  G
Sbjct: 230 AMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERR--NAIQWTTVIVGHAQEG 287

Query: 271 RVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
           +V+EA+  FR    + +R       + V+V +       G QVH    K+      SV+N
Sbjct: 288 QVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN 347

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + + MY  CG   EA   F  +  +++VSW  MI+   +   GR AI  + EMQ  G+  
Sbjct: 348 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEA 407

Query: 388 DEFTFGSLLAS---SGFIE 403
           DE  + +LL++   SG ++
Sbjct: 408 DEVAYLALLSACSHSGLVD 426



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 49/355 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  ++  + +G  +D+L +F ++   H  +PD ++ ++ L AC+ L  A  G Q+H
Sbjct: 169 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVH 228

Query: 81  AYALRAGLKAYPH--VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           A     G+    +  +A  +L +Y     L    +VF  ++  +   WTT +    + G 
Sbjct: 229 AAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQ 288

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V  A                               + LFR      VR D +  +SV++V
Sbjct: 289 VKEA-------------------------------MCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             D  L+E G+Q+H    K+     VSV N+L+ MY  CG   +A + F E      + +
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPAR--NVV 375

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQV 310
           S+  M++G+   G   EA+  F +M    +   E+ +++++SAC        C R   ++
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 311 -HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMIST 363
              + M+   E Y  +    + +    G++ EA  +I +   E  +  W T++S 
Sbjct: 436 CQDRRMRPKAEHYACM----VDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA 486



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + AR SSLR G Q+H  ++K    S   L N +I +YAKCG L  +  VF+ M E++ 
Sbjct: 11  LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW AL+  +  HGE +E +  F  M+  G   P++ T +A L AC   G    G +I  
Sbjct: 71  VSWTALMVGFLHHGEARECLRLFGEMRGSG-TSPNEFTLSATLKAC--GGGTRAGVQIHG 127

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
             V   GF   +   + ++ +  +  +  +A RV +   I +R+   W ++ S  A  G 
Sbjct: 128 VCVRT-GFEGHDVVANSLVVMYSKGRWTGDARRVFDV--IPSRNLATWNSMISGYAHAGQ 184

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW--EEAANIRELLKRTGV 722
            R   ++   +  R  ++P  +   S + A +GL    E A +   +   GV
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV 236


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 191/552 (34%), Positives = 300/552 (54%), Gaps = 12/552 (2%)

Query: 189 NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           N+   SVL  C      + G+++H  V K G    V V NAL+ MY  C  V  A  VF+
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCP 304
             K    D +S++ M+  L+     + AL   R+M    +RPSE+  VS++   +     
Sbjct: 154 --KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANM 211

Query: 305 RVGYQVHAQAMKSGFEAYTSV--SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           R+G  +HA  +++    +  V  + A + MY+ CG +  A  +F  L +K +VSW  MI+
Sbjct: 212 RMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 271

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIIT 419
              + N        ++ MQ   I P+E T  SL+   GF   +++ + +HA++  NG   
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ ++ AL+  Y K   I+ A  +F +   R+++ W  +++ +       Q    F ++ 
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            S +RP + T+   LS CA   +L  GK +H Y+ K  +     L  A++ +YAKCGD++
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + R+F   I +D   WNA+I+ +A HG G+EA+  F  M+  G +KP+  TF  +L AC
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG-VKPNDITFIGLLHAC 510

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SHAGLV +G ++F+ MV+ +G +P  +H  CM+DLLGRAG LDEA  +I S  I+  +  
Sbjct: 511 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 570

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W AL +AC  H N +LG + A  LLE E +     VL+SNIYAAA  W +AA +R+ +K 
Sbjct: 571 WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKT 630

Query: 720 TGVIKQPGCSWI 731
            G+ K+PG S I
Sbjct: 631 VGMKKEPGHSVI 642



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 129/516 (25%), Positives = 244/516 (47%), Gaps = 44/516 (8%)

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           + L AC  +     G ++H + L+ GL     V N ++ +Y     +   + VF ++   
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV SW+T                               MI   + N   D+ + L REM+
Sbjct: 159 DVVSWST-------------------------------MIRSLSRNKEFDMALELIREMN 187

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFS--CLVSVVNALITMYFNCGN 238
            + VR    +  S++++  D   +  G+ +H+ V ++  +    V    AL+ MY  CG+
Sbjct: 188 FMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGH 247

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A ++F          +S+  M+ G     R+EE    F  M   ++ P+E+T +S++
Sbjct: 248 LGLARQLFNGLTQKTV--VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305

Query: 299 SACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
             C      ++G Q+HA  +++GF    +++ A + MY  C  I  A  +F   Q +D++
Sbjct: 306 VECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVM 365

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
            W  M+S YAQ N    A   + +M++ G+RP + T  SLL   A +G +++ + +H+++
Sbjct: 366 IWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI 425

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
               +  +  ++ AL+  YAK   I  A ++F     R+I  WN +I GF ++G+  + L
Sbjct: 426 DKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 485

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F+E+    ++P++ T    L +C+    +  GK++   ++    L+ ++     M+ L
Sbjct: 486 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDL 545

Query: 532 YAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
             + G LD +  +  +M I+ +TI W AL++A   H
Sbjct: 546 LGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 581



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 222/482 (46%), Gaps = 51/482 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + +LSR+  +  AL L  +++   +++P   ++ + +   A+  N   G  +HAY +R  
Sbjct: 167 IRSLSRNKEFDMALELIREMNFM-QVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 225

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
              +  V  T                             T  L    K GH+  A ++F+
Sbjct: 226 NNEHMGVPTT-----------------------------TALLDMYAKCGHLGLARQLFN 256

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEF 206
            +  + +  + AMI GC  +   + G  LF  M + ++  +  +  S++  C   G L+ 
Sbjct: 257 GLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQL 316

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH+ + ++GFS  +++  AL+ MY  C ++ +A  +F+  +    D + +  M+   
Sbjct: 317 GKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNR--DVMIWTAMLSAY 374

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
           A    +++A   F  M  + +RP+++T VS++S C       +G  VH+   K   E   
Sbjct: 375 AQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDC 434

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            ++ A + MY+ CG I+ A  +F     +DI  WN +I+ +A    G  A+  + EM+  
Sbjct: 435 ILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 494

Query: 384 GIRPDEFTFGSLLASSGFIEMV--------EMIHAFVFINGIITNIQVSNALISAYAKNE 435
           G++P++ TF  LL +     +V        +M+H F    G++  I+    ++    +  
Sbjct: 495 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF----GLVPQIEHYGCMVDLLGRAG 550

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            + +A+++  +M  + N I W  L+    L+  P  G    ++LL  E+ P+    +V +
Sbjct: 551 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL--EIEPENCGYNVLM 608

Query: 495 SS 496
           S+
Sbjct: 609 SN 610


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 203/623 (32%), Positives = 334/623 (53%), Gaps = 20/623 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIG---IGLF 177
           DV++  T ++     G    A  VFD+MP RD+  +N++++    NG  ED     +G+ 
Sbjct: 153 DVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMM 212

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           R    ++V     S  S+L  C     E FG  +H LV K G + +V++ NAL+ MY   
Sbjct: 213 RSGVPVNVA----SLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKF 268

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G++  +  VF   +    + +S+N  +   A  G  E+ L  FR M    + P  +T  S
Sbjct: 269 GDLESSMHVFNGMQEK--NEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSS 326

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           ++ A +      +G ++H  +++   E+   ++N  + MY+  G  ++A  IF  ++ ++
Sbjct: 327 LLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRN 386

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           +VSWN MI+   Q      A    +EMQ  G  P+ FT  +LL +   +  V+M   IHA
Sbjct: 387 VVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHA 446

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +     +++++ VSNALI  YAK  ++  A  IF + S ++ +++NTLI G+  +    +
Sbjct: 447 WSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIF-DRSEKDGVSYNTLIVGYSQSQCCFE 505

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F ++ ++ +  D  +    LS+C+ +S+ + GK+IHG ++K  L S   L N+++ 
Sbjct: 506 SLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLD 565

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y K G LD + ++FN + +KD  SWN +I  Y  HG+   A   F  M+D G I+ D  
Sbjct: 566 VYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDG-IEYDHV 624

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           ++ AVLS CSH GLVD G + F  M+      P + H +CM+DLLGRAG L E+  +I +
Sbjct: 625 SYIAVLSVCSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRN 683

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +A SD W AL  +C  HG++ L R+ A  L E + +    Y LL N+Y+ +G+W EA
Sbjct: 684 MPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEA 743

Query: 711 ANIRELLKRTGVIKQPGCSWIGS 733
             +++L+K   V K P  SW+ S
Sbjct: 744 NGVKKLMKSRKVQKNPAYSWVQS 766



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 252/550 (45%), Gaps = 47/550 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           ++ SL + L AC   R+  FG  +H   L+ GL +  ++ N ++ +Y    DL S   VF
Sbjct: 219 NVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVF 278

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           + +Q  +  SW    SA     H  +                           +ED+ + 
Sbjct: 279 NGMQEKNEVSWN---SAIGCFAHAGF---------------------------HEDV-LE 307

Query: 176 LFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +FR M + DV   + + +S+L ++ D G    G++LH    +      + + N L+ MY 
Sbjct: 308 MFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYA 367

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G    A  +FE  +  V + +S+N M+  L   G   EA     +M      P+  T 
Sbjct: 368 KFGCSEKASAIFENIE--VRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTL 425

Query: 295 VSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+++ AC      ++G Q+HA +++    +   VSNA I +Y+ CG+++ A  IF R  E
Sbjct: 426 VNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SE 484

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEM 407
           KD VS+NT+I  Y+Q      ++  + +M+  GI  D  +F   L++    S F +  E 
Sbjct: 485 KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKE- 543

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH  +    + ++  ++N+L+  Y K   +  A +IF+ ++ +++ +WNT+I G+ ++G 
Sbjct: 544 IHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQ 603

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
                + F  +    +  D  +    LS C+    +  GK+    ++  N+  +      
Sbjct: 604 IDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQNIKPQQMHYAC 663

Query: 528 MITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           M+ L  + G L  S  +  NM    ++  W AL+ +   HG+ + A     A + +  +K
Sbjct: 664 MVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELAR---LAAEHLFELK 720

Query: 587 PDQATFTAVL 596
           P+ + +  +L
Sbjct: 721 PENSGYYTLL 730



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 222/505 (43%), Gaps = 58/505 (11%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC------PRVGYQVHA 312
           +N +   LAS     EAL  +  M+ + +RP + TF   + A         P  G ++HA
Sbjct: 83  WNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHA 142

Query: 313 QAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            A++ G   A     N  +T Y+ CG+  +A  +F  +  +D+VSWN+++S      +  
Sbjct: 143 AALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLE 202

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNAL 427
            A  A + M   G+  +  +  S+L + G  E  E     +H  V   G+ + + + NAL
Sbjct: 203 DAKRAVVGMMRSGVPVNVASLVSILPACG-TERDEGFGLCVHGLVLKFGLNSVVNLGNAL 261

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K   ++ +  +F+ M  +N ++WN+ I  F   GF    L+ F  +   ++ P  
Sbjct: 262 VDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGS 321

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            TLS  L +   +     GK++HGY ++  + S + + N ++ +YAK G  + +  +F  
Sbjct: 322 VTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFEN 381

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  ++ +SWNA+I+   Q+G   EA      MQ  G   P+  T   +L ACS    V  
Sbjct: 382 IEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGEC-PNSFTLVNLLPACSRVASVKM 440

Query: 608 GTRIF-----DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--- 659
           G +I       S+++D  F+      + ++D+  + G L+ A  + +       S N   
Sbjct: 441 GKQIHAWSIRRSLMSDL-FVS-----NALIDVYAKCGQLNLARYIFDRSEKDGVSYNTLI 494

Query: 660 ------------------------------WWALFSACAAHGNLRLGRIIAGLLLEREQD 689
                                         +    SAC+     + G+ I G+L++R  D
Sbjct: 495 VGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLD 554

Query: 690 K-PSVYVLLSNIYAAAGLWEEAANI 713
             P +   L ++Y   G+ + A+ I
Sbjct: 555 SHPFLANSLLDVYTKGGMLDTASKI 579



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 222/478 (46%), Gaps = 50/478 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N ++   + +G ++D L +F ++ S H + P   +LS+ L A  +L     G +LH Y++
Sbjct: 290 NSAIGCFAHAGFHEDVLEMF-RLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSI 348

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  +++   +ANT++ +Y                                K G  + A  
Sbjct: 349 RRAVESDIFIANTLMDMY-------------------------------AKFGCSEKASA 377

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           +F+ +  R++  +NAMI   T+NG E     L  EM K     ++++  ++L  C     
Sbjct: 378 IFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVAS 437

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           ++ G+Q+H+   +      + V NALI +Y  CG +  A  +F+ ++    D +SYN ++
Sbjct: 438 VKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEK---DGVSYNTLI 494

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G +      E+L  F+ M +A +    ++F+  +SAC      + G ++H   +K   +
Sbjct: 495 VGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLD 554

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           ++  ++N+ + +Y+  G +D A  IF R+ +KD+ SWNTMI  Y        A   +  M
Sbjct: 555 SHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLM 614

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN----ALISAYAKNER 436
           +  GI  D  ++ ++L+      +V+    + F   I  NI+        ++    +  +
Sbjct: 615 KDDGIEYDHVSYIAVLSVCSHGGLVDRGKKY-FSQMIAQNIKPQQMHYACMVDLLGRAGQ 673

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE---YTL 490
           + ++ +I  NM  R N   W  L+    ++G  ++  +  +E L  EL+P+    YTL
Sbjct: 674 LSESAEIIRNMPFRANSDVWGALLGSCRIHG-DIELARLAAEHLF-ELKPENSGYYTL 729



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 150/310 (48%), Gaps = 16/310 (5%)

Query: 309 QVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTYA 365
           + HA ++ SG   A   ++ A +  Y++   I  A +I      + +    WN++    A
Sbjct: 32  RAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRLRSAFLWNSLSRALA 91

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM------IHAFVFINGII- 418
              L   A+  Y  M   G+RPD+ TF   L ++  +   E       +HA     G++ 
Sbjct: 92  SAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKGAELHAAALRRGLLL 151

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            ++   N L++ YA   R   A ++F  M  R++++WN+L++  L NG      +    +
Sbjct: 152 ADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGM 211

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           + S +  +  +L   L +C        G  +HG VLK  L S ++LGNA++ +Y K GDL
Sbjct: 212 MRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDL 271

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + S+ VFN M EK+ +SWN+ I  +A  G  ++ +  F+ M +   + P   T +++L A
Sbjct: 272 ESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSE-HDVTPGSVTLSSLLPA 330

Query: 599 CSHAGLVDDG 608
                LVD G
Sbjct: 331 -----LVDLG 335


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 230/720 (31%), Positives = 348/720 (48%), Gaps = 76/720 (10%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGL--KAYPHVANTILSLYK--NARDLVSV 111
           D ++L   + + A LR+A     LHA ALR  L  +  P V N +L+ Y      D    
Sbjct: 62  DHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALA 121

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
               +  +  D  S+ + +SA       + A +    M                  G  D
Sbjct: 122 LFAATATELRDAVSYNSLISALCLFRQWERALDALRDM---------------LAEGRHD 166

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-----DAGLLEFGRQLHSLVTKSGF---SCLV 223
           +                +++  SVL  C     D G    GR+ H+   K GF       
Sbjct: 167 V---------------SSFTLVSVLLACSHLPGDDG-RRLGREAHAFALKRGFLDEGRER 210

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVC----DHISYNVMMDGLASVGRVEEALIRF 279
              NAL++MY   G V DA  +F            D +++N M+  L   GR  EA+   
Sbjct: 211 FPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVL 270

Query: 280 RDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSS 335
            DM+   +RP  +TF S + AC       +G ++HA  +K     A + V++A + MY+ 
Sbjct: 271 YDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAG 330

Query: 336 CGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTF 392
             K+  A  +F  + E  + +  WN MI  YAQ  +   A+  +  M++  G  P E T 
Sbjct: 331 NEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTM 390

Query: 393 GSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             +L     S GF    E +H +V   G+  N  V NAL+  YA+   +  A +IF  + 
Sbjct: 391 SGVLPACARSEGFAGK-EAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMID 449

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMS----------------ELRPDEYTLSV 492
           PR++++WNTLI G ++ G   +  Q  +E+ +                    P+  TL  
Sbjct: 450 PRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMT 509

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L  CA +++   GK+IHGY +++ L S +++G+A++ +YAKCG L  S  VF+ +  ++
Sbjct: 510 LLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRN 569

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            I+WN LI AY  HG G EAV+ F  M   G   P++ TF A L+ACSH+GLVD G  +F
Sbjct: 570 VITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELF 629

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACAAHG 671
             M  D+G  P  D  +C++D+LGRAG LDEA  +I S    + +   W +L  AC  H 
Sbjct: 630 HGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHR 689

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ LG + A  L E E  + S YVLL NIY+AAG+W+++  +R  ++R GV K+PGCSWI
Sbjct: 690 NVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWI 749



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 206/470 (43%), Gaps = 61/470 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L + G   +A+ +   +  S  ++PD  + ++ L AC+ L   A G ++HA  L
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDM-VSLGVRPDGVTFASALPACSRLEMLALGREMHAVVL 309

Query: 85  R-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           + A L A   VA+ ++ +Y     + S +RVF  +                         
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPE----------------------- 346

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCDAG 202
                 P R L ++NAMI G  + G ++  + LF  M  +        + + VL  C   
Sbjct: 347 ------PSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARS 400

Query: 203 LLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
               G++ +H  V K G +    V NAL+ MY   G +  A ++F        D +S+N 
Sbjct: 401 EGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPR--DVVSWNT 458

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLR----------------PSELTFVSVMSAC---L 302
           ++ G    G   EA     +M + S                  P+ +T ++++  C    
Sbjct: 459 LITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALA 518

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
            P  G ++H  A++   E+  +V +A + MY+ CG +  +  +F RL  +++++WN +I 
Sbjct: 519 APARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIM 578

Query: 363 TYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGI 417
            Y    LG  A+  + EM + G   P+E TF + LA+   SG ++  +E+ H     +G+
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGV 638

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLN 465
                +   ++    +  R+ +AY I  +M P  + +  W++L+    L+
Sbjct: 639 KPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLH 688


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/615 (31%), Positives = 312/615 (50%), Gaps = 9/615 (1%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PDV      L A  K G +  A ++FD+MP +++  +   I+GCT NG  +    +F +M
Sbjct: 40  PDVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADM 99

Query: 181 HKLDVRRDNYSFASVLSVCDAGLL---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            +  V  ++++  + L+ C A        G Q+HSL  ++GF+    + + LI +Y  CG
Sbjct: 100 LESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCG 159

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A +VF   +    D + Y  ++  L   G +  A+     M+   L+P+E T  S+
Sbjct: 160 SMWAAEEVFRRMEAP--DVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSM 217

Query: 298 MSACLCPR-VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           ++ C  PR +G Q+H   +K         S A I  YS  G  D A  +F  L  K++VS
Sbjct: 218 LAEC--PRMIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVS 275

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFING 416
           W +M+    +      A+  + EM S  + P+EF F   L + G + +   IH       
Sbjct: 276 WCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVCLGRQIHCSAIKCN 335

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++T+I+VSNAL+S Y ++  + +   +   +   ++++W   I+    NGF  + +    
Sbjct: 336 LMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLL 395

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++      P++Y  S  LSSCA ++ L  G+Q+H   LK     K+  GNA+I +Y+KCG
Sbjct: 396 QMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCG 455

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  +   F++M   D +SWN+LI   AQHG     +  F  M   G  +PD +TF AVL
Sbjct: 456 QIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSG-WQPDDSTFIAVL 514

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
             C+HAGLV +G   F  M + YG  P   H +CM+D+LGR G  DEA  +I +   +  
Sbjct: 515 VGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPD 574

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              W  L ++C  H NL +G++    L+E  +   + YVL+SN+YA    W++A  +R  
Sbjct: 575 VLIWKTLLASCKLHKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRR 634

Query: 717 LKRTGVIKQPGCSWI 731
           +   GV K  G SWI
Sbjct: 635 MDEIGVKKDAGWSWI 649



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 223/498 (44%), Gaps = 41/498 (8%)

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           + G Q+H+ A+RAG  A   + + ++ LY     + + + VF  ++ PDV  +T+ +SA 
Sbjct: 127 SLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSAL 186

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G +  A EV                  C              +M +  ++ + ++  
Sbjct: 187 CRNGDLARAVEVL-----------------C--------------QMMRQGLQPNEHTMT 215

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           S+L+ C   +   G Q+H  + K   S  V    ALI  Y   G+   A  VFE      
Sbjct: 216 SMLAECPRMI---GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSK- 271

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            + +S+  MM      GR+E+AL  F +M+  ++ P+E  F   + AC    +G Q+H  
Sbjct: 272 -NVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVCLGRQIHCS 330

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K        VSNA ++MY   G + E   +  +++  D+VSW   IS   Q      A
Sbjct: 331 AIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKA 390

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           +   L+M S G  P+++ F S L+S   + +++    +H      G    +   NALI+ 
Sbjct: 391 VALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINM 450

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K  +I  A   F  M+  ++++WN+LI+G   +G     L+ FSE+  S  +PD+ T 
Sbjct: 451 YSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTF 510

Query: 491 SVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMM 548
              L  C     ++ G+     +  +  L    S    MI +  + G  D +L +  NM 
Sbjct: 511 IAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMP 570

Query: 549 IEKDTISWNALISAYAQH 566
            E D + W  L+++   H
Sbjct: 571 FEPDVLIWKTLLASCKLH 588



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 182/437 (41%), Gaps = 48/437 (10%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L R+G    A+ +  Q+     L+P+ +++++ LA C  +     G Q+H Y L+     
Sbjct: 186 LCRNGDLARAVEVLCQMMR-QGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQ 240

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             + +  ++  Y    D    + VF  + + +V SW + +  C + G ++ A  VF    
Sbjct: 241 SVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFS--- 297

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQL 210
                                       EM    V  + ++F+  L  C  G +  GRQ+
Sbjct: 298 ----------------------------EMISEAVEPNEFAFSIALGAC--GSVCLGRQI 327

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    K      + V NAL++MY   G V +   V  + +    D +S+   +      G
Sbjct: 328 HCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENP--DLVSWTAAISANFQNG 385

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
             E+A+     M      P++  F S +S+C    +   G Q+H  A+K G +      N
Sbjct: 386 FSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGN 445

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MYS CG+I  A + F  +   D++SWN++I   AQ       + A+ EM S G +P
Sbjct: 446 ALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQP 505

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFIN----GIITNIQVSNALISAYAKNERIKQAYQI 443
           D+ TF ++L       +V+    F  +     G+         +I    +N R  +A  +
Sbjct: 506 DDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHM 565

Query: 444 FHNMS-PRNIITWNTLI 459
             NM    +++ W TL+
Sbjct: 566 IKNMPFEPDVLIWKTLL 582



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 166/365 (45%), Gaps = 62/365 (16%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  +DAL +F ++  S  ++P+ ++ S  L AC ++     G Q+H  A++  L    
Sbjct: 285 RDGRLEDALRVFSEM-ISEAVEPNEFAFSIALGACGSV---CLGRQIHCSAIKCNLMTDI 340

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V+N +LS+Y  +  +  V+ V  +I+NPD+ SWT                         
Sbjct: 341 RVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWT------------------------- 375

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                 A I+   +NG+ +  + L  +MH      ++Y+F+S LS C D  LL+ GRQLH
Sbjct: 376 ------AAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLH 429

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L  K G    V   NALI MY  CG +  A   F+    +  D +S+N ++ GLA  G 
Sbjct: 430 CLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLH--DVMSWNSLIHGLAQHGA 487

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN---- 327
               L  F +M  +  +P + TF++V+  C         HA  +K G   +  +++    
Sbjct: 488 ANLVLEAFSEMCSSGWQPDDSTFIAVLVGC--------NHAGLVKEGETFFRLMTDRYGL 539

Query: 328 --------AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSAIL 375
                     I M    G+ DEA  +   +  E D++ W T++++   +   ++G+ A  
Sbjct: 540 TPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATD 599

Query: 376 AYLEM 380
             +E+
Sbjct: 600 KLMEL 604


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/683 (29%), Positives = 349/683 (51%), Gaps = 46/683 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S    L ACA LR+   G++LH+  ++ G  +   + N ++S+Y    DL + +R+F   
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           Q                                 D  ++N++++  + +G     + LFR
Sbjct: 244 QEKG------------------------------DAVLWNSILSSYSTSGKSLETLELFR 273

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
           EMH      ++Y+  S L+ CD     + G+++H+ V KS   S  + V NALI MY  C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A ++  +      D +++N ++ G       +EAL  F DM+ A  +  E++  S
Sbjct: 334 GKMPQAERILRQMNN--ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391

Query: 297 VMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +++A    R+     G ++HA  +K G+++   V N  I MYS C         F R+ +
Sbjct: 392 IIAAS--GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
           KD++SW T+I+ YAQ +    A+  + ++    +  DE   GS+L +S  ++   +V+ I
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +   G++  + + N L+  Y K   +  A ++F ++  +++++W ++I+   LNG  
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + ++ F  ++ + L  D   L   LS+ A +S+L  G++IH Y+L+     + S+  A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +YA CGDL  +  VF+ +  K  + + ++I+AY  HG GK AV  F  M+    + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPD 687

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             +F A+L ACSHAGL+D+G      M ++Y   P  +H  C++D+LGRA  + EA   +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                +  ++ W AL +AC +H    +G I A  LLE E   P   VL+SN++A  G W 
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +   +R  +K +G+ K PGCSWI
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWI 830



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 182/634 (28%), Positives = 308/634 (48%), Gaps = 60/634 (9%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +D A +VFD+MPDR    +N MI     NG     + L+  M    V     SF +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187

Query: 195 VLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAK 250
           +L  C A L +   G +LHSL+ K G+     +VNAL++MY    ++  A ++F+  + K
Sbjct: 188 LLKAC-AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
           G   D + +N ++   ++ G+  E L  FR+M +    P+  T VS ++AC      ++G
Sbjct: 247 G---DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303

Query: 308 YQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
            ++HA  +KS    +   V NA I MY+ CGK+ +A  I  ++   D+V+WN++I  Y Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEM-IHAFVFINGIITNIQV 423
             + + A+  + +M + G + DE +  S++A+SG +   +  M +HA+V  +G  +N+QV
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI  Y+K        + F  M  +++I+W T+I G+  N   V+ L+ F ++    +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
             DE  L   L + + + S+   K+IH ++L+  L+  + + N ++ +Y KC ++  + R
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATR 542

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  +  KD +SW ++IS+ A +G   EAV  F+ M + G +  D      +LSA +   
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLS 601

Query: 604 LVDDGTRIFDSMVNDYGF-------IPAEDHLSCMLDLLGRAGYLDEAER--------VI 648
            ++ G  I   ++   GF       +   D  +C  DL       D  ER        +I
Sbjct: 602 ALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660

Query: 649 NS-----------------QHIQARSDN--WWALFSACAAHGNLRLGRIIAGLL--LERE 687
           N+                 +H     D+  + AL  AC+  G L  GR   G L  +E E
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR---GFLKIMEHE 717

Query: 688 ---QDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
              +  P  YV L ++   A    EA    +++K
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 161/299 (53%), Gaps = 9/299 (3%)

Query: 307 GYQVHAQAMKSGFEAYT--SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           G Q+H++  K+ F ++    ++   + MY  CG +D+A  +F  + ++   +WNTMI  Y
Sbjct: 99  GRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
                  SA+  Y  M+  G+     +F +LL +   +  +     +H+ +   G  +  
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLM 480
            + NAL+S YAKN+ +  A ++F     + + + WN++++ +  +G  ++ L+ F E+ M
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLD 539
           +   P+ YT+  AL++C   S  + GK+IH  VLK++   S++ + NA+I +Y +CG + 
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
            + R+   M   D ++WN+LI  Y Q+   KEA+  F  M   G  K D+ + T++++A
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAA 395



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 231/562 (41%), Gaps = 61/562 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L++ S SG   + L LF ++H +    P+ Y++ + L AC     A  G ++HA  L
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVL 311

Query: 85  RAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++   +   +V N ++++Y     +   +R+  ++ N DV +W                 
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW----------------- 354

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--A 201
                         N++I G  +N      +  F +M     + D  S  S+++     +
Sbjct: 355 --------------NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            LL  G +LH+ V K G+   + V N LI MY  C       + F   + +  D IS+  
Sbjct: 401 NLLA-GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTT 457

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           ++ G A      EAL  FRD+    +   E+   S++ A    +   +  ++H   ++ G
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               T + N  + +Y  C  +  A  +F  ++ KD+VSW +MIS+ A       A+  + 
Sbjct: 518 L-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G+  D      +L+++  +  +     IH ++   G      ++ A++  YA   
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A  +F  +  + ++ + ++IN + ++G     ++ F ++    + PD  +    L 
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696

Query: 496 SCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN---- 546
           +C+    L  G+       H Y L+             + L    G  +C +  F     
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELE-------PWPEHYVCLVDMLGRANCVVEAFEFVKM 749

Query: 547 MMIEKDTISWNALISAYAQHGE 568
           M  E     W AL++A   H E
Sbjct: 750 MKTEPTAEVWCALLAACRSHSE 771



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 111/243 (45%), Gaps = 20/243 (8%)

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITL 531
           + F  L +SE        +  L  C +  ++  G+Q+H  + K     ++  L   ++ +
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y KCG LD + +VF+ M ++   +WN +I AY  +GE   A++ +  M+  G +    ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-VPLGLSS 184

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           F A+L AC+    +  G+ +   +V    +  GFI     ++ ++ +  +   L  A R+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI-----VNALVSMYAKNDDLSAARRL 239

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ----DKPSVYVLLSNIYAA 703
            +    +  +  W ++ S+ +       G+ +  L L RE       P+ Y ++S + A 
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTS-----GKSLETLELFREMHMTGPAPNSYTIVSALTAC 294

Query: 704 AGL 706
            G 
Sbjct: 295 DGF 297


>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
          Length = 696

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 332/621 (53%), Gaps = 19/621 (3%)

Query: 126 WTTFLSACTKMGHVDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           W   L+A ++      A    VFD++P RD   +NA++     +G       L R MH  
Sbjct: 28  WNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGAHPEAWRLLRAMHAQ 87

Query: 184 DVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            +  + ++  S L S   A     G QL SL  KSG +  V   +AL+ +Y  CG V DA
Sbjct: 88  GLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDA 147

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+       + +S+N ++ G    G +  AL  F +M    L P E TF S+++A  
Sbjct: 148 RQVFDGMPER--NTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVE 205

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNT 359
            P   + +Q+H + +K G     +V NAAIT YS CG + ++  IF  + + +D++SWN 
Sbjct: 206 GPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNA 265

Query: 360 MISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS---SGFIE-MVEMIHAFVFI 414
           M+  Y    +   A+  ++ M Q  G+ PD ++F S+++S    G  +    +IH  V  
Sbjct: 266 MLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIK 325

Query: 415 NGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           + +     V NALI+ Y +   N  ++ AY+ F+++  ++ ++WN+++ G+  +G     
Sbjct: 326 SALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L+ F  +    +R DEY  S AL S + ++ L+ GKQIHG V+ +   S   + +++I +
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-DQA 590
           Y+K G +D + + F    +  ++ WNA+I  YAQHG+ +     F  M  + R  P D  
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEM--LQRKAPLDHI 503

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  ++++CSHAGLVD+G+ I ++M   YG     +H +C +DL GRAG LD+A+++I+S
Sbjct: 504 TFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDS 563

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +  +  W  L  AC  HGN+ L   +A  L   E  + S YVLLS++Y+  G+W + 
Sbjct: 564 MPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSGLGMWSDR 623

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A ++ ++K+ G+ K PG S I
Sbjct: 624 ATVQRVMKKRGLSKVPGWSLI 644



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 263/559 (47%), Gaps = 52/559 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  + SG + +A  L   +H+   L  + ++L + L + A  R  A G QL + AL
Sbjct: 62  NALLAAHAASGAHPEAWRLLRAMHA-QGLASNTFALGSALRSAAVARRPAIGAQLQSLAL 120

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL      A+ +L +Y                                K G V  A +
Sbjct: 121 KSGLANNVFAASALLDVY-------------------------------AKCGRVRDARQ 149

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFD MP+R+   +NA+I G TE+G     + LF EM +  +  D  +FAS+L+  +    
Sbjct: 150 VFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVPDEATFASLLTAVEGPSC 209

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
               QLH  + K G +  ++V+NA IT Y  CG++ D+ ++F +  G + D IS+N M+ 
Sbjct: 210 FLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIF-DGIGDIRDLISWNAMLG 268

Query: 265 GLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGF 319
                G  +EA+  F R M  + + P   +F S++S+C         G  +H   +KS  
Sbjct: 269 AYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSAL 328

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMI------FARLQEKDIVSWNTMISTYAQRNLGRSA 373
           E  T V NA I MY+   + +E CM+      F  L  KD VSWN+M++ Y+Q  L   A
Sbjct: 329 EGVTPVCNALIAMYT---RYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADA 385

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M S  +R DE+ F + L SS     +++ + IH  V  +G  +N  VS++LI  
Sbjct: 386 LKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFM 445

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+K+  I  A + F      + + WN +I G+  +G        F+E+L  +   D  T 
Sbjct: 446 YSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITF 505

Query: 491 SVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
              ++SC+    +  G +I +    K  +  +M      + LY + G LD + ++ + M 
Sbjct: 506 VGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMP 565

Query: 549 IEKDTISWNALISAYAQHG 567
            E D + W  L+ A   HG
Sbjct: 566 FEPDAMVWMTLLGACRIHG 584



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 37/348 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA-NLRNAAFGNQL 79
           L+  N  L   + +G   +A+  FV++     + PD+YS ++ +++C+ +  +   G  +
Sbjct: 260 LISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI 319

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   +++ L+    V N ++++Y                        T +   C  M   
Sbjct: 320 HGLVIKSALEGVTPVCNALIAMY------------------------TRYNENC--MMED 353

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SV 198
            Y C  F+ +  +D   +N+M+TG +++G     +  FR M   +VR D Y+F++ L S 
Sbjct: 354 AYKC--FNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSS 411

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            +  +L+ G+Q+H LV  SGF+    V ++LI MY   G + DA K FEEA       + 
Sbjct: 412 SELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADK--SSSVP 469

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQA 314
           +N M+ G A  G+ E   I F +ML        +TFV ++++C    L       ++   
Sbjct: 470 WNAMIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTME 529

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
            K G           + +Y   G++D+A  +   +  E D + W T++
Sbjct: 530 TKYGVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLL 577


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/703 (29%), Positives = 346/703 (49%), Gaps = 90/703 (12%)

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS--WTTFLSACTKMGHVDYACEVF 146
           KA P++  + L+L +N ++     +    I  P + +  ++   S+C  +          
Sbjct: 3   KAAPNLCFSPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTI 62

Query: 147 D-KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
           D ++ D +  + +    G  EN  E I +    E+       +  +++SVL +C AGL  
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELICMCKKSEL-------ETKTYSSVLQLC-AGLKS 114

Query: 206 F--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE---------------- 247
           F  G+++HS++  +      ++   L++ Y  CG++ +  +VF+                
Sbjct: 115 FTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174

Query: 248 -----EAKGYVC----------------------------DHISYNVMMDGLASVGRVEE 274
                + K  +C                            D IS+N M+ G  S G  E 
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            L  ++ M+   +     T +SV+  C       +G  VH+ A+KS FE   + SN  + 
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS CG +D A  +F ++ E+++VSW +MI+ Y +      AI    +M+  G++ D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             S+L   A SG ++  + +H ++  N + +N+ V NAL+  YAK   ++ A  +F  M 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            ++II+WNT+I                      EL+PD  T++  L +CA +S+L  GK+
Sbjct: 415 VKDIISWNTMI---------------------GELKPDSRTMACVLPACASLSALERGKE 453

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           IHGY+L+N   S   + NA++ LY KCG L  +  +F+M+  KD +SW  +I+ Y  HG 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G EA++ F  M+D G I+PD+ +F ++L ACSH+GL++ G R F  M ND+   P  +H 
Sbjct: 514 GNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHY 572

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +CM+DLL R G L +A   I +  I   +  W AL   C  + ++ L   +A  + E E 
Sbjct: 573 ACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEP 632

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +    YVLL+NIYA A  WEE   +RE + + G+ K PGCSWI
Sbjct: 633 ENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 157/623 (25%), Positives = 288/623 (46%), Gaps = 63/623 (10%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI+AT    + T    +   N  + +  + G  ++A+ L      S +L+   YS  + L
Sbjct: 53  RISAT---PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCKKS-ELETKTYS--SVL 106

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
             CA L++   G ++H+      +     +   ++S Y    DL   +RVF  ++  +VY
Sbjct: 107 QLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVY 166

Query: 125 SWTTFLSACTKMGHV--------------------DYACEVFDKMPDRDLPVYNAMITGC 164
            W   +S   K+G                      + A E+FDK+ DRD+  +N+MI+G 
Sbjct: 167 LWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGY 226

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV 223
             NG  + G+G++++M  L +  D  +  SVL  C ++G L  G+ +HSL  KS F   +
Sbjct: 227 VSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI 286

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           +  N L+ MY  CG++  A +VFE+      + +S+  M+ G    GR + A+   + M 
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQME 344

Query: 284 VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              ++   +   S++ AC        G  VH     +  E+   V NA + MY+ CG ++
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
            A  +F+ +  KDI+SWNTMI                       ++PD  T   +L   A
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACA 443

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           S   +E  + IH ++  NG  ++  V+NAL+  Y K   +  A  +F  +  +++++W  
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           +I G+ ++G+  + +  F+E+  + + PDE +    L +C+    L  G +   Y++KN 
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKND 562

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVS 574
            N+  K+     M+ L ++ G+L  +      + I  D   W AL+     + + + A  
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAE- 621

Query: 575 CFKAMQDVGRIKPDQATFTAVLS 597
             K  + V  ++P+ + +  +L+
Sbjct: 622 --KVAERVFELEPENSGYYVLLA 642


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  330 bits (846), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 201/683 (29%), Positives = 349/683 (51%), Gaps = 46/683 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S    L ACA LR+   G++LH+  ++ G  +   + N ++S+Y    DL + +R+F   
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           Q                                 D  ++N++++  + +G     + LFR
Sbjct: 244 QEKG------------------------------DAVLWNSILSSYSTSGKSLETLELFR 273

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
           EMH      ++Y+  S L+ CD     + G+++H+ V KS   S  + V NALI MY  C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A ++  +      D +++N ++ G       +EAL  F DM+ A  +  E++  S
Sbjct: 334 GKMPQAERILRQMNN--ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391

Query: 297 VMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +++A    R+     G ++HA  +K G+++   V N  I MYS C         F R+ +
Sbjct: 392 IIAAS--GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
           KD++SW T+I+ YAQ +    A+  + ++    +  DE   GS+L +S  ++   +V+ I
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +   G++  + + N L+  Y K   +  A ++F ++  +++++W ++I+   LNG  
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + ++ F  ++ + L  D   L   LS+ A +S+L  G++IH Y+L+     + S+  A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +YA CGDL  +  VF+ +  K  + + ++I+AY  HG GK AV  F  M+    + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPD 687

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             +F A+L ACSHAGL+D+G      M ++Y   P  +H  C++D+LGRA  + EA   +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                +  ++ W AL +AC +H    +G I A  LLE E   P   VL+SN++A  G W 
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +   +R  +K +G+ K PGCSWI
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWI 830



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 182/634 (28%), Positives = 308/634 (48%), Gaps = 60/634 (9%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +D A +VFD+MPDR    +N MI     NG     + L+  M    V     SF +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187

Query: 195 VLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAK 250
           +L  C A L +   G +LHSL+ K G+     +VNAL++MY    ++  A ++F+  + K
Sbjct: 188 LLKAC-AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
           G   D + +N ++   ++ G+  E L  FR+M +    P+  T VS ++AC      ++G
Sbjct: 247 G---DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303

Query: 308 YQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
            ++HA  +KS    +   V NA I MY+ CGK+ +A  I  ++   D+V+WN++I  Y Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEM-IHAFVFINGIITNIQV 423
             + + A+  + +M + G + DE +  S++A+SG +   +  M +HA+V  +G  +N+QV
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N LI  Y+K        + F  M  +++I+W T+I G+  N   V+ L+ F ++    +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
             DE  L   L + + + S+   K+IH ++L+  L+  + + N ++ +Y KC ++  + R
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATR 542

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  +  KD +SW ++IS+ A +G   EAV  F+ M + G +  D      +LSA +   
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLS 601

Query: 604 LVDDGTRIFDSMVNDYGF-------IPAEDHLSCMLDLLGRAGYLDEAER--------VI 648
            ++ G  I   ++   GF       +   D  +C  DL       D  ER        +I
Sbjct: 602 ALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660

Query: 649 NS-----------------QHIQARSDN--WWALFSACAAHGNLRLGRIIAGLL--LERE 687
           N+                 +H     D+  + AL  AC+  G L  GR   G L  +E E
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR---GFLKIMEHE 717

Query: 688 ---QDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
              +  P  YV L ++   A    EA    +++K
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 165/315 (52%), Gaps = 12/315 (3%)

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           F  V+  C   R    G Q+H++  K+   FE    ++   + MY  CG +D+A  +F  
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFE-LDFLAGKLVFMYGKCGSLDDAEKVFDE 141

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
           + ++   +WNTMI  Y       SA+  Y  M+  G+     +F +LL +   +  +   
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201

Query: 408 --IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLL 464
             +H+ +   G  +   + NAL+S YAKN+ +  A ++F     + + + WN++++ +  
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMS 523
           +G  ++ L+ F E+ M+   P+ YT+  AL++C   S  + GK+IH  VLK++   S++ 
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + NA+I +Y +CG +  + R+   M   D ++WN+LI  Y Q+   KEA+  F  M   G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381

Query: 584 RIKPDQATFTAVLSA 598
             K D+ + T++++A
Sbjct: 382 H-KSDEVSMTSIIAA 395



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 231/562 (41%), Gaps = 61/562 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L++ S SG   + L LF ++H +    P+ Y++ + L AC     A  G ++HA  L
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVL 311

Query: 85  RAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++   +   +V N ++++Y     +   +R+  ++ N DV +W                 
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW----------------- 354

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--A 201
                         N++I G  +N      +  F +M     + D  S  S+++     +
Sbjct: 355 --------------NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            LL  G +LH+ V K G+   + V N LI MY  C       + F   + +  D IS+  
Sbjct: 401 NLLA-GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTT 457

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           ++ G A      EAL  FRD+    +   E+   S++ A    +   +  ++H   ++ G
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               T + N  + +Y  C  +  A  +F  ++ KD+VSW +MIS+ A       A+  + 
Sbjct: 518 L-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G+  D      +L+++  +  +     IH ++   G      ++ A++  YA   
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A  +F  +  + ++ + ++IN + ++G     ++ F ++    + PD  +    L 
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696

Query: 496 SCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN---- 546
           +C+    L  G+       H Y L+             + L    G  +C +  F     
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELE-------PWPEHYVCLVDMLGRANCVVEAFEFVKM 749

Query: 547 MMIEKDTISWNALISAYAQHGE 568
           M  E     W AL++A   H E
Sbjct: 750 MKTEPTAEVWCALLAACRSHSE 771



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 111/243 (45%), Gaps = 20/243 (8%)

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITL 531
           + F  L +SE        +  L  C +  ++  G+Q+H  + K     ++  L   ++ +
Sbjct: 66  EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y KCG LD + +VF+ M ++   +WN +I AY  +GE   A++ +  M+  G +    ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-VPLGLSS 184

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           F A+L AC+    +  G+ +   +V    +  GFI     ++ ++ +  +   L  A R+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI-----VNALVSMYAKNDDLSAARRL 239

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ----DKPSVYVLLSNIYAA 703
            +    +  +  W ++ S+ +       G+ +  L L RE       P+ Y ++S + A 
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTS-----GKSLETLELFREMHMTGPAPNSYTIVSALTAC 294

Query: 704 AGL 706
            G 
Sbjct: 295 DGF 297


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 189/607 (31%), Positives = 332/607 (54%), Gaps = 19/607 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVC 199
           +A  + D+MP R+   YN +I+  +  G     +  F        +R D +++A+ L+ C
Sbjct: 54  HAARLIDEMPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAAC 113

Query: 200 DAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
              L L  G+ +H++    G    V + N+L +MY +CG + +A +VF+ A+ +  D +S
Sbjct: 114 SRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEH--DDVS 171

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQ 313
           +N ++ G    G  EE L  F  M    L  +     S++  C     +   +   VH  
Sbjct: 172 WNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGC 231

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ------R 367
            +K+G +A   +++A I MY+  G +  A  +F  + + +++ +N MI+ + +      +
Sbjct: 232 VVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGK 291

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVS 424
            + R A+  Y EMQS G++P EFTF S+L +   +G     + IH  V  +    +  + 
Sbjct: 292 EVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIG 351

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           +ALI  Y+ +  ++  Y+ F ++  ++I+TW ++I+G + N    + L+ F E +   L+
Sbjct: 352 SALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLK 411

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD +T+S  +++CA ++  R G+QI    +K       ++GN+ I + A+ GD+D   R 
Sbjct: 412 PDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRR 471

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  M  +D +SW+A+IS++AQHG  ++A+  F  M +  ++ P++ TF  VL+ACSH GL
Sbjct: 472 FQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNA-KVAPNEVTFLNVLTACSHGGL 530

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           VDDG R ++ M N+YG  P   H++C++DLLGRAG L +AE  I        +  W +L 
Sbjct: 531 VDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLL 590

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           ++C  HG++  G+++A  +++ E    + YV+L N+Y  AG    A+  R+L+K  GV K
Sbjct: 591 ASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKK 650

Query: 725 QPGCSWI 731
           +PG SWI
Sbjct: 651 EPGLSWI 657



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/563 (24%), Positives = 258/563 (45%), Gaps = 54/563 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +++ SR+G    AL  F +  ++  L+ D ++ +  LAAC+   +   G  +HA  +
Sbjct: 71  NLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMTV 130

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL     ++N++ S+Y +  ++   +RVF   +  D  SW + LS   + G  +   +
Sbjct: 131 LDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETLK 190

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF  M              C        G+G            ++++  S++  C +G  
Sbjct: 191 VFSLM--------------CHH------GLGW-----------NSFALGSIIKCCASG-S 218

Query: 205 EFGRQL----HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           + GR +    H  V K+G    + + +A+I MY   G + +A  +F+       + I +N
Sbjct: 219 DVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDP--NVIVFN 276

Query: 261 VMMDGL----ASVGR--VEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGY--QVH 311
            M+ G     A+VG+    EAL  + +M    ++PSE TF S++ AC L    G+  Q+H
Sbjct: 277 AMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIH 336

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            Q +K  F     + +A I +YS  G +++    F  L ++DIV+W +MIS   Q  L  
Sbjct: 337 GQVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFE 396

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  + E    G++PD FT  S++   AS       E I       G      + N+ I
Sbjct: 397 KALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFI 456

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
              A++  +    + F  M  R++++W+ +I+    +G     L+ F+E++ +++ P+E 
Sbjct: 457 HMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEV 516

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDL-DCSLRVF 545
           T    L++C+    +  G + +  ++KN   L   +     ++ L  + G L D    + 
Sbjct: 517 TFLNVLTACSHGGLVDDGLRYY-EIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIR 575

Query: 546 NMMIEKDTISWNALISAYAQHGE 568
           +     D + W +L+++   HG+
Sbjct: 576 DSAFHDDAVVWRSLLASCRIHGD 598


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 213/707 (30%), Positives = 355/707 (50%), Gaps = 48/707 (6%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH- 93
           G    AL  F+  H          +L   +  C ++ +   G QLHA  +R G   + H 
Sbjct: 33  GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCG---HDHG 89

Query: 94  ---VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V  +++ +Y N   ++  ++VF  +   +V +WT                       
Sbjct: 90  DIRVGTSLVDMYMNWHSVLDGRKVFEGMLKRNVVTWT----------------------- 126

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQ 209
                   +++TG  + G     + LF  M    V  + ++F+SVLS V   G+++ G+ 
Sbjct: 127 --------SLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQH 178

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H+   K G    V V N+L+ MY  CG V +A  VF   +    D +S+N +M GL   
Sbjct: 179 VHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVF--CRMETRDMVSWNTLMAGLVLN 236

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
           GR  EAL  F D   +    +E T+ +V++ C   +   +  Q+H+  +K GF +Y +V 
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM 296

Query: 327 NAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            A +  Y+  G++D+A  +F  +   +++VSW  MI    Q      A   +  M+  G+
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            P++ T+ ++L  S        IHA V          V  AL+ +Y+K    ++A  IF 
Sbjct: 357 APNDLTYSTILTVSE-ASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFK 415

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS-LR 504
            +  +++++W+ ++  +   G        F ++ M  L+P+E+T+S A+ +CA  ++ + 
Sbjct: 416 MIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVD 475

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+Q H   +K+     + + +A++++YA+ G ++ +  VF    ++D +SWN+++S YA
Sbjct: 476 LGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYA 535

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           QHG  ++A+  F+ M+  G I  D  TF +V+  C+HAGLV++G + FD MV DYG  P 
Sbjct: 536 QHGYSQKALDVFRQMEVEG-IDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPT 594

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            DH +CM+DL  RAG LDE   +I      A    W AL  AC  H N+ LG++ A  LL
Sbjct: 595 MDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLL 654

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             E    + YVLLSNIY+AAG W+E   +R+L+    V K+ GCSWI
Sbjct: 655 SLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWI 701



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 203/452 (44%), Gaps = 51/452 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A L  +G   +AL LF    SS  +  +  + ST +  CANL++     QLH
Sbjct: 223 MVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTE-STYSTVINLCANLKHLGLARQLH 281

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF---SEIQNPDVYSWTTFLSACTKMG 137
           +  L+ G  +Y +V   ++  Y  A  L     VF   S  QN  V SWT  +  C + G
Sbjct: 282 SSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQN--VVSWTAMIDGCIQNG 339

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                          D+P+  A                LF  M +  V  ++ +++++L+
Sbjct: 340 ---------------DIPLAAA----------------LFSRMREDGVAPNDLTYSTILT 368

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           V +A    F  Q+H+ V K+ + C  +V  AL+  Y    +  +A  +F+       D +
Sbjct: 369 VSEA---SFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMIDQK--DVV 423

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQ 313
           S++ M+   A  G    A   F  M +  L+P+E T  S + AC  P     +G Q HA 
Sbjct: 424 SWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAI 483

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           ++K        VS+A ++MY+  G I+ A  +F R  ++D++SWN+M+S YAQ    + A
Sbjct: 484 SIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKA 543

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN-GIITNIQVSNALIS 429
           +  + +M+  GI  D  TF S++   A +G +E  +     +  + GI   +     ++ 
Sbjct: 544 LDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVD 603

Query: 430 AYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
            Y++  ++ +   +   M  P     W  L+ 
Sbjct: 604 LYSRAGKLDETMSLIEGMPFPAGPTIWRALLG 635


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 211/661 (31%), Positives = 326/661 (49%), Gaps = 68/661 (10%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G  DYA  V +++       +N +I    + G  D  I +   M +   R D+++   VL
Sbjct: 65  GATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVL 124

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVC 254
             C +      G   H L+  +GF   V + NAL+ MY  CG++ +A  +F+E  +  + 
Sbjct: 125 KACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGID 184

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSE-----LTFVSVMSAC----LCP 304
           D IS+N ++           AL  F  M L+   +P+      ++ V+++ AC      P
Sbjct: 185 DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVP 244

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM---- 360
           +   +VH  A+++G      V NA I  Y+ CG ++ A  +F  ++ KD+VSWN M    
Sbjct: 245 QTK-EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGY 303

Query: 361 -------------------------------ISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
                                          I+ Y+QR     A+  + +M   G  P+ 
Sbjct: 304 SQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNC 363

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIIT----------NIQVSNALISAYAKNER 436
            T  S+L   AS G       IHA+   N ++T          ++ V NALI  Y+K   
Sbjct: 364 VTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRS 423

Query: 437 IKQAYQIFHN--MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDEYTLSV 492
            K A  IF +  +  RN++TW  +I G    G     L+ F E++     + P+ YT+S 
Sbjct: 424 FKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISC 483

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            L +CA ++++R GKQIH YVL+++    S   + N +I +Y+KCGD+D +  VF+ M +
Sbjct: 484 ILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQ 543

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K  ISW ++++ Y  HG G EA+  F  M+  G + PD  TF  VL ACSH G+VD G  
Sbjct: 544 KSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFLVVLYACSHCGMVDQGLS 602

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            FDSM  DYG  P  +H +  +DLL R G LD+A + +    ++  +  W AL SAC  H
Sbjct: 603 YFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVH 662

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ L       L+E   +    Y L+SNIYA AG W++ A IR L+K++G+ K+PGCSW
Sbjct: 663 SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 722

Query: 731 I 731
           +
Sbjct: 723 V 723



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 157/310 (50%), Gaps = 13/310 (4%)

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F +  S+    +  Y +CG  D A ++  R+     V WN +I  + ++    SAI    
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G R D FT   +L + G +         H  +  NG  +N+ + NAL++ Y++  
Sbjct: 107 RMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCG 166

Query: 436 RIKQAYQIFHNMSPR---NIITWNTLINGFLLNGFPVQGLQHFSELLM------SELRPD 486
            +++A  IF  ++ R   ++I+WN++++  + +      L  FS++ +      +  R D
Sbjct: 167 SLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSD 226

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             ++   L +C  + ++   K++HG  ++N     + +GNA+I  YAKCG ++ +++VFN
Sbjct: 227 IISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 286

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           MM  KD +SWNA+++ Y+Q G  K A   FK M+    I  D  T+TAV++  S  G   
Sbjct: 287 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRK-ENIPLDMVTWTAVIAGYSQRGCSH 345

Query: 607 DGTRIFDSMV 616
           +   +F  M+
Sbjct: 346 EALNVFRQMI 355



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 197/436 (45%), Gaps = 49/436 (11%)

Query: 3   QRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKP-----DI 57
           QR I   I+ NS  S  +            +S +   AL LF ++      KP     DI
Sbjct: 180 QRGIDDVISWNSIVSAHV------------KSSNAWTALDLFSKMTLIVHEKPTNERSDI 227

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
            S+   L AC +L+      ++H  A+R G      V N ++  Y     + +  +VF+ 
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 287

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYEDIG 173
           ++  DV SW   ++  ++ G+   A E+F  M   ++P+    + A+I G ++ G     
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS-------- 224
           + +FR+M       +  +  SVLS C + G    G ++H+   K+   CL++        
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKN---CLLTLDNDFGGE 404

Query: 225 -----VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
                V NALI MY  C +   A  +F++      + +++ VM+ G A  G   +AL  F
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464

Query: 280 RDMLVAS--LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS----VSNAAI 330
            +M+     + P+  T   ++ AC      R+G Q+HA  ++     Y S    V+N  I
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH--HQYDSSAYFVANCLI 522

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MYS CG +D A  +F  + +K  +SW +M++ Y     G  A+  + +M+  G  PD+ 
Sbjct: 523 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 582

Query: 391 TFGSLLASSGFIEMVE 406
           TF  +L +     MV+
Sbjct: 583 TFLVVLYACSHCGMVD 598



 Score = 45.4 bits (106), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 83/205 (40%), Gaps = 8/205 (3%)

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
            IS  SLG  ++  Y  CG  D +L V   +     + WN LI  + + G    A++   
Sbjct: 47  FISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSC 106

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G  + D  T   VL AC        G+  F  ++   GF       + ++ +  R
Sbjct: 107 RMLRAG-TRLDHFTLPHVLKACGELPSYRCGSA-FHGLICCNGFESNVFICNALVAMYSR 164

Query: 638 AGYLDEAERVINSQHIQARSD--NWWALFSACAAHGN----LRLGRIIAGLLLEREQDKP 691
            G L+EA  + +    +   D  +W ++ SA     N    L L   +  ++ E+  ++ 
Sbjct: 165 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 224

Query: 692 SVYVLLSNIYAAAGLWEEAANIREL 716
           S  + + NI  A G  +     +E+
Sbjct: 225 SDIISIVNILPACGSLKAVPQTKEV 249


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 222/775 (28%), Positives = 371/775 (47%), Gaps = 86/775 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y DAL +F ++     L P++ +  T L AC +LR+   G  LH+    AGL   P   N
Sbjct: 214 YPDALRIFREM-LLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEAGLGFDPLAGN 269

Query: 97  TILSLYKNARDLVSVKRVFSEI---QNPDVYSWTTFLSACTKMGHVDYACEVFDKM---- 149
            ++++Y    D      VF  +   Q  D+ SW   +SA  + G    A  +F ++    
Sbjct: 270 ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEG 329

Query: 150 --PD----------------------------------RDLPVYNAMITGCTENGYEDIG 173
             P+                                  RD+ V NA+I+   + G+    
Sbjct: 330 MRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAA 389

Query: 174 IGLFREMH-KLDV------------RR-------------------DNYSFASVLSVC-D 200
             +FR +  K DV            R+                   +  SF ++L+ C +
Sbjct: 390 WTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449

Query: 201 AGLLEFGRQLHSLV-TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +  L+FGR++HSL+ T+       SV   L++MY  CG++ +A  VF+E        +++
Sbjct: 450 SEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTW 509

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           NVM+   A   R +EA     +ML   + P  L+F SV+S+C C +    +    ++SG+
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGY 569

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   +  A I+M+  C ++++A  +F  +   D+VSW  M+S  A+    +     +  
Sbjct: 570 RS-ACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRR 628

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ  G+ PD+FT  + L +   S  + + ++IHA V   G+  +I V NAL++ Y+    
Sbjct: 629 MQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGD 688

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            ++A   F  M  R++++WN +   +   G   + +  F  + +  ++PD+ T S  L+ 
Sbjct: 689 WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNV 748

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
               + +  GK  HG   ++ L S +S+   ++ LYAKCG LD ++ +F    +   +  
Sbjct: 749 SGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLL 808

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA+I A AQHG  +EAV  F  MQ  G ++PD AT  +++SAC HAG+V++G   F +M 
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWKMQQEG-VRPDVATLVSIISACGHAGMVEEGCSSFLTMK 867

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             +G  P  +H +C +DLLGRAG L+ AE++I     +  +  W +L   C   G+  LG
Sbjct: 868 EYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELG 927

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              A  +LE +    + +V+LSNIY A G W++A   R+ L    V   PG SW+
Sbjct: 928 ERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWL 982



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 181/693 (26%), Positives = 304/693 (43%), Gaps = 62/693 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK-- 89
           ++SG +  A  LF  +       P+ Y+L   L ACAN R+ A G  +HA     GL+  
Sbjct: 102 AQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERE 161

Query: 90  --AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V N ++++Y           VF  I   DV SWT    A        YA E   
Sbjct: 162 STTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGA--------YAQE--- 210

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                                Y D  + +FREM    +  +  +F + L  C +  L  G
Sbjct: 211 ------------------RRFYPD-ALRIFREMLLQPLAPNVITFITALGACTS--LRDG 249

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGL 266
             LHSL+ ++G        NALI MY  CG+   A  VF+  A     D +S+N M+   
Sbjct: 250 TWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISAS 309

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAY 322
              GR  +A+  FR + +  +RP+ +T +++++A     V +    + H +  +SG+   
Sbjct: 310 VEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRD 369

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             V NA I+MY+ CG    A  +F R++ K D++SWNTM+     R      +  +  M 
Sbjct: 370 VVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHML 429

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNERI 437
             GI P++ +F ++L   ++S  ++    IH+ +           V+  L+S Y K   I
Sbjct: 430 LAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSI 489

Query: 438 KQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +A  +F  M    R+++TWN ++  +  N    +      E+L   + PD  + +  LS
Sbjct: 490 AEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLS 549

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           SC      +  + +   +L++   S   L  A+I+++ +C +L+ +  VF+ M   D +S
Sbjct: 550 SC---YCSQEAQVLRMCILESGYRSA-CLETALISMHGRCRELEQARSVFDEMDHGDVVS 605

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W A++SA A++ + KE    F+ MQ  G I PD+ T    L  C  +  +  G +I  + 
Sbjct: 606 WTAMVSATAENRDFKEVHHLFRRMQLEGVI-PDKFTLATTLDTCLDSTTLGLG-KIIHAC 663

Query: 616 VNDYGF---IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           V + G    I  E+ L   L++    G   EA     +  ++AR    W + SA  A   
Sbjct: 664 VTEIGLEADIAVENAL---LNMYSNCGDWREALSFFET--MKARDLVSWNIMSAAYAQAG 718

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           L    ++    ++ E  KP      + +  + G
Sbjct: 719 LAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 264/561 (47%), Gaps = 50/561 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+   +  L +C +  + A G + H     AGL+ +  + N ++++Y     L     +F
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           S+++  +V SWT  +SA  + G    A  +F  M                          
Sbjct: 84  SKMEERNVVSWTALISANAQSGAFARAFALFRTM-------------------------- 117

Query: 176 LFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF----SCLVSVVNALI 230
               + +     ++Y+  ++L+ C ++  L  GR +H+++ + G     +    V NA+I
Sbjct: 118 ----LLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMI 173

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV-EEALIRFRDMLVASLRP 289
            MY  CG+  DA  VF        D +S+  M    A   R   +AL  FR+ML+  L P
Sbjct: 174 NMYAKCGSPEDAIAVFLTIPEK--DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAP 231

Query: 290 SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF--- 346
           + +TF++ + AC   R G  +H+   ++G        NA I MY  CG  + A  +F   
Sbjct: 232 NVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAM 291

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGF-I 402
           A  QE D+VSWN MIS   +      A+  +  ++  G+RP+  T  ++   LA+SG   
Sbjct: 292 ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLING 461
                 H  ++ +G + ++ V NA+IS YAK      A+ +F  +  + ++I+WNT++  
Sbjct: 352 GAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLIS 520
                   + +  F  +L++ + P++ +    L++C+   +L  G++IH  +L +     
Sbjct: 412 SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           + S+   ++++Y KCG +  +  VF  M    +  ++WN ++ AYAQ+   KEA      
Sbjct: 472 ESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALME 531

Query: 579 MQDVGRIKPDQATFTAVLSAC 599
           M   G + PD  +FT+VLS+C
Sbjct: 532 MLQ-GGVLPDALSFTSVLSSC 551



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 210/453 (46%), Gaps = 53/453 (11%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G + H     +G E +  + N  I MY  CG ++EA  IF++++E+++VSW  +IS  AQ
Sbjct: 44  GKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISANAQ 103

Query: 367 RN-LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI----I 418
                R+  L    +      P+ +T  ++L   A+S  + +   IHA ++  G+     
Sbjct: 104 SGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLEREST 163

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN-GFPVQGLQHFSE 477
           T   V NA+I+ YAK    + A  +F  +  +++++W  +   +     F    L+ F E
Sbjct: 164 TATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFRE 223

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L+  L P+  T   AL +C   +SLR G  +H  + +  L      GNA+I +Y KCGD
Sbjct: 224 MLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGD 280

Query: 538 LDCSLRVFNMMI---EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
            + +  VF  M    E D +SWNA+ISA  + G   +A++ F+ ++  G ++P+  T   
Sbjct: 281 WEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEG-MRPNSVTLIT 339

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA---------- 644
           +L+A + +G+     R F   + + G++      + ++ +  + G+   A          
Sbjct: 340 ILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWK 399

Query: 645 -------------------ERVINSQH------IQARSDNWWALFSACAAHGNLRLGRII 679
                               +V+N+ H      I     ++ A+ +AC+    L  GR I
Sbjct: 400 CDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKI 459

Query: 680 AGLLLEREQD--KPSVYVLLSNIYAAAGLWEEA 710
             L+L R +D  + SV  +L ++Y   G   EA
Sbjct: 460 HSLILTRRRDYVESSVATMLVSMYGKCGSIAEA 492



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 38/263 (14%)

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           EYT    L SC   + L  GK+ H  +    L   + LGN +I +Y +CG L+ +  +F+
Sbjct: 27  EYT--ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFS 84

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS------ 600
            M E++ +SW ALISA AQ G    A + F+ M       P+  T  A+L+AC+      
Sbjct: 85  KMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLA 144

Query: 601 -----HAGLVDDG--------TRIFDSMVNDYGFIPA-EDHLSCMLDLLGR--------A 638
                HA + + G        T + ++M+N Y    + ED ++  L +  +        A
Sbjct: 145 IGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMA 204

Query: 639 G-------YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD-K 690
           G       +  +A R+     +Q  + N     +A  A  +LR G  +  LL E      
Sbjct: 205 GAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFD 264

Query: 691 PSVYVLLSNIYAAAGLWEEAANI 713
           P     L N+Y   G WE A  +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGV 287



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 33/188 (17%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  NI  A  +++G  ++A+ LF  +     +KPD  + STTL         + G   H
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRHMQL-EGVKPDKLTFSTTLNVSGGSALVSDGKLFH 762

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A  +GL +   VA  ++ LY                                K G +D
Sbjct: 763 GLAAESGLDSDVSVATGLVKLY-------------------------------AKCGKLD 791

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F       + + NA+I    ++G+ +  + +F +M +  VR D  +  S++S C 
Sbjct: 792 EAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851

Query: 201 -AGLLEFG 207
            AG++E G
Sbjct: 852 HAGMVEEG 859


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 230/773 (29%), Positives = 372/773 (48%), Gaps = 64/773 (8%)

Query: 15   NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
            +TS++L+    I  A+  ++   +D  HLF  +  S  +    ++L+     C    + +
Sbjct: 689  DTSRDLVTWNAILSAHADKA---RDGFHLFRLLRRSF-VSATRHTLAPVFKMCLLSASPS 744

Query: 75   FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
                LH YA++ GL+    VA  ++++Y     +   + +F  +   DV  W   + A  
Sbjct: 745  AAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYV 804

Query: 135  KMGHVDYACEVFDKM------PD------------------------------------- 151
              G    A  +F +       PD                                     
Sbjct: 805  DTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDD 864

Query: 152  ----RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
                 D+  +N  ++   + G     +  F +M    V  D  +F  +LSV  AGL  LE
Sbjct: 865  DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVV-AGLNCLE 923

Query: 206  FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
             G+Q+H +V +SG   +VSV N LI MY   G+V  A  VF +      D +S+N M+ G
Sbjct: 924  LGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE--VDLVSWNTMISG 981

Query: 266  LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG----YQVHAQAMKSGFEA 321
             A  G  E ++  F D+L   L P + T  SV+ AC     G     Q+HA AMK+G   
Sbjct: 982  CALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVL 1041

Query: 322  YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             + VS   I +YS  GK++EA  +F      D+ SWN M+  Y        A+  Y+ MQ
Sbjct: 1042 DSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQ 1101

Query: 382  SVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              G R ++ T  +   ++G +   +  + I A V   G   ++ V + ++  Y K   ++
Sbjct: 1102 ESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEME 1161

Query: 439  QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
             A +IF+ +   + + W T+I+G + NG     L  +  + +S+++PDEYT +  + +C+
Sbjct: 1162 SARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACS 1221

Query: 499  RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
             +++L  G+QIH   +K N      +  +++ +YAKCG+++ +  +F         SWNA
Sbjct: 1222 LLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNA 1281

Query: 559  LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
            +I   AQHG  +EA+  F+ M+  G + PD+ TF  VLSACSH+GLV +    F SM   
Sbjct: 1282 MIVGLAQHGNAEEALQFFEEMKSRG-VTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKI 1340

Query: 619  YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
            YG  P  +H SC++D L RAG + EAE+VI+S   +A +  +  L +AC    +   G+ 
Sbjct: 1341 YGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKR 1400

Query: 679  IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +A  LL  E    + YVLLSN+YAAA  WE  A+ R ++++  V K PG SW+
Sbjct: 1401 VAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWV 1453



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 159/652 (24%), Positives = 282/652 (43%), Gaps = 75/652 (11%)

Query: 113  RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYE 170
            R+ +   +PD +     ++  +K G +  A ++FD  PD  RDL  +NA+++   +   +
Sbjct: 651  RILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAHADKARD 710

Query: 171  DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
              G  LFR + +  V    ++ A V  +C  +        LH    K G    V V  AL
Sbjct: 711  --GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGAL 768

Query: 230  ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            + +Y   G + +A  +F+     + D + +NVMM      G   EAL+ F +     LRP
Sbjct: 769  VNIYAKFGRIREARVLFDGMG--LRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRP 826

Query: 290  SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
             ++T       C   RV             ++  +V    +    + G   +  M     
Sbjct: 827  DDVTL------CTLARV------------VKSKQNVLEWQLKQLKAYGT--KLFMYDDDD 866

Query: 350  QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG---SLLASSGFIEMVE 406
               D+++WN  +S + QR     A+  +++M +  +  D  TF    S++A    +E+ +
Sbjct: 867  DGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGK 926

Query: 407  MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
             IH  V  +G+   + V N LI+ Y K   + +A  +F  M+  ++++WNT+I+G  L+G
Sbjct: 927  QIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSG 986

Query: 467  FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH-GKQIHGYVLKNNLISKMSLG 525
                 +  F +LL   L PD++T++  L +C+ +    H   QIH   +K  ++    + 
Sbjct: 987  LEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046

Query: 526  NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
              +I +Y+K G ++ +  +F      D  SWNA++  Y   G+  +A+  +  MQ+ G  
Sbjct: 1047 TTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGE- 1105

Query: 586  KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            + +Q T      A      +  G +I  ++V   GF      +S +LD+  + G ++ A 
Sbjct: 1106 RANQITLANAAKAAGGLVGLKQGKQI-QAVVVKRGFNLDLFVISGVLDMYLKCGEMESAR 1164

Query: 646  RVINSQHIQARSD-NWWALFSACAAHG----------NLRLGRI------------IAGL 682
            R+ N   I +  D  W  + S C  +G          ++RL ++               L
Sbjct: 1165 RIFN--EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSL 1222

Query: 683  LLEREQDK--------------PSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            L   EQ +              P V   L ++YA  G  E+A   R L KRT
Sbjct: 1223 LTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDA---RGLFKRT 1271



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 232/522 (44%), Gaps = 63/522 (12%)

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            L  G++ H+ +  SG      + N LITMY  CG++  A K+F+       D +++N ++
Sbjct: 642  LPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAIL 701

Query: 264  DGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
               A   R    L R  R   V++ R    T   V   CL    P     +H  A+K G 
Sbjct: 702  SAHADKARDGFHLFRLLRRSFVSATRH---TLAPVFKMCLLSASPSAAESLHGYAVKIGL 758

Query: 320  EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +    V+ A + +Y+  G+I EA ++F  +  +D+V WN M+  Y    L   A+L + E
Sbjct: 759  QWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSE 818

Query: 380  MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
                G+RPD+ T  +L       + V               ++     + AY       +
Sbjct: 819  FNRTGLRPDDVTLCTLARVVKSKQNV---------------LEWQLKQLKAYG-----TK 858

Query: 440  AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
             +    +    ++I WN  ++ FL  G   + +  F +++ S +  D  T  V LS  A 
Sbjct: 859  LFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAG 918

Query: 500  ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            ++ L  GKQIHG V+++ L   +S+GN +I +Y K G +  +  VF  M E D +SWN +
Sbjct: 919  LNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTM 978

Query: 560  ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS------------HAGLVDD 607
            IS  A  G  + +V  F  +   G + PDQ T  +VL ACS            HA  +  
Sbjct: 979  ISGCALSGLEECSVGMFVDLLR-GGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037

Query: 608  GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV-INSQHIQARSDNWWALFSA 666
            G  + DS V+           + ++D+  ++G ++EAE + +N       S  W A+   
Sbjct: 1038 GV-VLDSFVS-----------TTLIDVYSKSGKMEEAEFLFVNQDGFDLAS--WNAMM-- 1081

Query: 667  CAAHGNLRLGRIIAGL---LLEREQDKPSVYVLLSNIYAAAG 705
               HG +  G     L   +L +E  + +  + L+N   AAG
Sbjct: 1082 ---HGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAG 1120



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 2/66 (3%)

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNA 558
           S L  GK+ H  +L +       L N +IT+Y+KCG L  + ++F+   +  +D ++WNA
Sbjct: 640 SDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNA 699

Query: 559 LISAYA 564
           ++SA+A
Sbjct: 700 ILSAHA 705


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 214/686 (31%), Positives = 348/686 (50%), Gaps = 48/686 (6%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +LS  L AC ++ +   G QLH   ++ G                            
Sbjct: 98  DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGH--------------------------- 130

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                 +V + T+ +    K G V    EVF+ MP +++  + +++TGC         + 
Sbjct: 131 ---DRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 176 LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF  M    +  + ++FASVLS V   G L+ G+++H+   K G    V V N+L+ MY 
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYA 247

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG V DA  VF   +    D +S+N +M GL       EAL  F +      + ++ T+
Sbjct: 248 KCGLVEDAKSVFNWMETR--DMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTY 305

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ- 350
            +V+  C   +   +  Q+H+  +K GF    +V  A    YS CG++ +A  IF+    
Sbjct: 306 ATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTG 365

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
            +++VSW  +IS   Q      A++ +  M+   + P+EFT+ ++L +S  I +   IHA
Sbjct: 366 SRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI-LPPQIHA 424

Query: 411 FVFINGIITNIQ----VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            V    I TN Q    V  AL+++Y+K    + A  IF  +  ++++ W+ +++     G
Sbjct: 425 QV----IKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAG 480

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS-LRHGKQIHGYVLKNNLISKMSLG 525
                   F+++ +  ++P+E+T+S  + +CA  S+ +  G+Q H   +K      + + 
Sbjct: 481 DCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVS 540

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A++++Y++ G++D +  VF    ++D +SWN++IS YAQHG   +A+  F+ M+  G I
Sbjct: 541 SALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASG-I 599

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           + D  TF AV+  C+H GLV +G + FDSMV D+   P  +H +CM+DL  RAG LDE  
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I      A +  W  L  AC  H N+ LG+  A  LL  E    S YVLLSNIYAAAG
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAG 719

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+E   +R+L+    V K+ GCSWI
Sbjct: 720 KWKERDEVRKLMDYRKVKKEAGCSWI 745



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 259/546 (47%), Gaps = 41/546 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   + +  + + + LF ++ +   + P+ ++ ++ L+A A+      G ++HA +++ G
Sbjct: 173 LTGCAHAQMHSEVMALFFRMRA-EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFG 231

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V N+++++Y     +   K VF+ ++  D+ SW                     
Sbjct: 232 CRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSW--------------------- 270

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                     N ++ G   N  E   + LF E      +    ++A+V+ +C +   L  
Sbjct: 271 ----------NTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLAL 320

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            RQLHS V K GF    +V+ AL   Y  CG + DA  +F    G   + +S+  ++ G 
Sbjct: 321 ARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSR-NVVSWTAIISGC 379

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
              G +  A++ F  M    + P+E T+ +++ A L   +  Q+HAQ +K+ ++   SV 
Sbjct: 380 IQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASL-SILPPQIHAQVIKTNYQHIPSVG 438

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A +  YS  G  ++A  IF  +++KD+V+W+ M+S +AQ      A   + +M   GI+
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498

Query: 387 PDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+EFT  S++      S  ++     HA          I VS+AL+S Y++   I  A  
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQI 558

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F   + R++++WN++I+G+  +G+ ++ ++ F ++  S ++ D  T    +  C     
Sbjct: 559 VFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGL 618

Query: 503 LRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALI 560
           +  G+Q    +++++ I+  M     M+ LY++ G LD ++ +  +M      + W  L+
Sbjct: 619 VVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLL 678

Query: 561 SAYAQH 566
            A   H
Sbjct: 679 GACRVH 684



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 207/455 (45%), Gaps = 55/455 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
           ++  N  +A L  +    +AL LF +  ++  K+    Y+  T +  CANL+  A   QL
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYA--TVIKLCANLKQLALARQL 324

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS-EIQNPDVYSWTTFLSACTKMGH 138
           H+  L+ G     +V   +   Y    +L     +FS    + +V SWT  +S C + G 
Sbjct: 325 HSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGD 384

Query: 139 VDYACEVFDKM-PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           +  A  +F +M  DR +P                                + ++++++L 
Sbjct: 385 IPLAVVLFSRMREDRVMP--------------------------------NEFTYSAMLK 412

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCD 255
              A L     Q+H+ V K+ +  + SV  AL+  Y   G+  DA  +F+  E K    D
Sbjct: 413 ---ASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQK----D 465

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVH 311
            ++++ M+   A  G  E A   F  M +  ++P+E T  SV+ AC CP  G     Q H
Sbjct: 466 VVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFH 525

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A ++K  +     VS+A ++MYS  G ID A ++F R  ++D+VSWN+MIS YAQ     
Sbjct: 526 AISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSM 585

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFVFINGIITNIQVSNAL 427
            AI  + +M++ GI+ D  TF +++         +E  +   + V  + I   ++    +
Sbjct: 586 KAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACM 645

Query: 428 ISAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
           +  Y++  ++ +   +  +M  P   + W TL+  
Sbjct: 646 VDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 96/195 (49%), Gaps = 3/195 (1%)

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N ++  +   G   + L  FS      +  D  TLS  L +C  +     G+Q+H   +K
Sbjct: 68  NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 516 -NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
             +   ++S G +++ +Y KCG +   + VF  M +K+ ++W +L++  A      E ++
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  M+  G I P+  TF +VLSA +  G +D G R+    V  +G   +    + ++++
Sbjct: 188 LFFRMRAEG-IWPNPFTFASVLSAVASQGALDLGQRVHAQSVK-FGCRSSVFVCNSLMNM 245

Query: 635 LGRAGYLDEAERVIN 649
             + G +++A+ V N
Sbjct: 246 YAKCGLVEDAKSVFN 260


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 207/604 (34%), Positives = 322/604 (53%), Gaps = 20/604 (3%)

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFAS 194
           +G+V  A   FD + +RD+  +N MI+G    G     I  F   M    +  D  +F S
Sbjct: 99  LGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS 158

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           VL  C   +   G ++H L  K GF   V V  +LI +Y     V +A  +F+E    V 
Sbjct: 159 VLKACRTVI--DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP--VR 214

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQV 310
           D  S+N M+ G    G  +EAL      L   LR  + +T VS++SAC        G  +
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+ ++K G E+   VSN  I +Y+  G++ +   +F R+  +D++SWN++I  Y      
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329

Query: 371 RSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING-IITNIQVSNA 426
             AI  + EM+   I+PD  T     S+L+  G I     +  F    G  + +I + NA
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRP 485
           ++  YAK   +  A  +F+ +   ++I+WNT+I+G+  NGF  + ++ ++ +    E+  
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           ++ T    L +C++  +LR G ++HG +LKN L   + +  ++  +Y KCG L+ +L +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +   +++ WN LI+ +  HG G++AV  FK M D G +KPD  TF  +LSACSH+GLV
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGLV 568

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           D+G   F+ M  DYG  P+  H  CM+D+ GRAG L+ A + I S  +Q  +  W AL S
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           AC  HGN+ LG+I +  L E E +    +VLLSN+YA+AG WE    IR +    G+ K 
Sbjct: 629 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688

Query: 726 PGCS 729
           PG S
Sbjct: 689 PGWS 692



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 268/587 (45%), Gaps = 60/587 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   R+G+  + +  F     S  L PD  +  + L AC   R    GN++H  AL
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLAL 177

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +VA +++ LY            +  + N  +                     
Sbjct: 178 KFGFMWDVYVAASLIHLYSR----------YKAVGNARI--------------------- 206

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD+MP RD+  +NAMI+G  ++G     + L   +  +    D+ +  S+LS C +AG 
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G  +HS   K G    + V N LI +Y   G + D  KVF+  + YV D IS+N ++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD--RMYVRDLISWNSII 320

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSG-F 319
                  +   A+  F++M ++ ++P  LT +   S++S     R    V    ++ G F
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               ++ NA + MY+  G +D A  +F  L   D++SWNT+IS YAQ      AI  Y  
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440

Query: 380 MQSVG-IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G I  ++ T+ S+L   + +G +     +H  +  NG+  ++ V  +L   Y K  
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           R++ A  +F+ +   N + WNTLI     +G   + +  F E+L   ++PD  T    LS
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560

Query: 496 SCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDT 553
           +C+    +  G+     +  +  +   +     M+ +Y + G L+ +L+ + +M ++ D 
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620

Query: 554 ISWNALISAYAQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
             W AL+SA   HG    GK       A + +  ++P+   +  +LS
Sbjct: 621 SIWGALLSACRVHGNVDLGK------IASEHLFEVEPEHVGYHVLLS 661



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 206/453 (45%), Gaps = 46/453 (10%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA+ + S       +S   + +Y   G +  A   F  +Q +D+ +WN MIS Y +   
Sbjct: 73  LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132

Query: 370 GRSAILAY-LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
               I  + L M S G+ PD  TF S+L +   +     IH      G + ++ V+ +LI
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLI 192

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DE 487
             Y++ + +  A  +F  M  R++ +WN +I+G+  +G   + L      L + LR  D 
Sbjct: 193 HLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDS 247

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   LS+C        G  IH Y +K+ L S++ + N +I LYA+ G L    +VF+ 
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG---- 603
           M  +D ISWN++I AY  + +   A+S F+ M+ + RI+PD  T  ++ S  S  G    
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQLGDIRA 366

Query: 604 -------------LVDDGT------------RIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
                         ++D T             + DS    + ++P  D +S    + G A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426

Query: 639 --GYLDEAERVIN----SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
             G+  EA  + N       I A    W ++  AC+  G LR G  + G LL +      
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLD 485

Query: 693 VYVL--LSNIYAAAGLWEEAANIRELLKRTGVI 723
           V+V+  L+++Y   G  E+A ++   + R   +
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 10/254 (3%)

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           ++  + +HA + ++  I N+ +S  L++ Y     +  A   F ++  R++  WN +I+G
Sbjct: 67  LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126

Query: 462 FLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           +   G   + ++ FS  ++S  L PD  T    L +C  +     G +IH   LK   + 
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +  ++I LY++   +  +  +F+ M  +D  SWNA+IS Y Q G  KEA++    ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
            +     D  T  ++LSAC+ AG  + G  I    +  +G        + ++DL    G 
Sbjct: 244 AM-----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 297

Query: 641 LDEAERVINSQHIQ 654
           L + ++V +  +++
Sbjct: 298 LRDCQKVFDRMYVR 311



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%)

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++L+  K +H  ++ +  I  + +   ++ LY   G++  +   F+ +  +D  +WN +I
Sbjct: 65  TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y + G   E + CF        + PD  TF +VL AC     V DG +I   +   +G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI-HCLALKFG 180

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           F+      + ++ L  R   +  A  + +   ++    +W A+ S     GN +    ++
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISGYCQSGNAKEALTLS 239

Query: 681 GLLLEREQDKPSVYVLLS 698
             L  R  D  +V  LLS
Sbjct: 240 NGL--RAMDSVTVVSLLS 255



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 18/264 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +++G   +A+ ++  +    ++  +  +  + L AC+       G +LH
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L+ GL     V  ++  +Y     L     +F +I   +   W T ++     GH +
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F +M D     D   +  +++ C+ +G  D G   F  M      + +Y     L
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM------QTDYGITPSL 588

Query: 197 SVCDAGLLEFGR--QLHS---LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
                 +  +GR  QL +    +         S+  AL++     GN VD  K+  E   
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLF 647

Query: 252 YV-CDHISYNVMMDGL-ASVGRVE 273
            V  +H+ Y+V++  + AS G+ E
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWE 671


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/618 (32%), Positives = 318/618 (51%), Gaps = 27/618 (4%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMI---TGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           GH+  A  +FD++P  D+  YN +I   +  +     D G+ L+R M +  V  +NY+F 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAAD-GLHLYRRMLRHRVAPNNYTFP 129

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             L  C A      GR +H     +G    + V  AL+ MY  C  + DA  +F      
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRF--RDMLVASLRPSELTFVSVMSACLCPRV---G 307
             D +++N M+ G A  G    A+       M +  LRP+  T V+++           G
Sbjct: 190 --DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 308 YQVHAQAM----------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
             VHA  +          KS       +  A + MY+ CG +  A  +F  +  ++ V+W
Sbjct: 248 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 307

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGI---RPDEFTFG-SLLASSGFIEMVEMIHAFVF 413
           + +I  +   +    A L +  M + G+    P          AS   + M E +HA + 
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 367

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +G+  ++   N+L+S YAK   I QA  +F  M+ ++ ++++ L++G++ NG   +   
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++    + PD  T+   + +C+ +++L+HG+  HG V+   L S+ S+ NA+I +YA
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG +D S +VFNMM  +D +SWN +I+ Y  HG GKEA + F  M ++G   PD  TF 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFI 546

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            +LSACSH+GLV +G   F  M + YG  P  +H  CM+DLL R G+LDEA   I S  +
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +A    W AL  AC  + N+ LG+ ++ ++ E   +    +VLLSNIY+AAG ++EAA +
Sbjct: 607 RADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666

Query: 714 RELLKRTGVIKQPGCSWI 731
           R + K  G  K PGCSWI
Sbjct: 667 RIIQKVQGFKKSPGCSWI 684



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 254/552 (46%), Gaps = 68/552 (12%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           D LHL+ ++   H++ P+ Y+    L AC+ L +   G  +H +A+ AGL+A   V+  +
Sbjct: 108 DGLHLYRRM-LRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTAL 166

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y     L            PD                   A  +F  MP RDL  +N
Sbjct: 167 LDMYVKCACL------------PD-------------------AAHIFATMPARDLVAWN 195

Query: 159 AMITGCTENGYEDIGIG----LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSL 213
           AM+ G   +G     +     +  +MH+L  R +  +  ++L  +   G L  G  +H+ 
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 214 V----------TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
                      +KS  +  V +  AL+ MY  CG+++ A +VF+       + ++++ ++
Sbjct: 254 CIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALI 311

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGF 319
            G     R+ +A + F+ ML   L   S  +  S + AC      R+G Q+HA   KSG 
Sbjct: 312 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGV 371

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            A  +  N+ ++MY+  G ID+A  +F  +  KD VS++ ++S Y Q      A L + +
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ+  + PD  T  SL+ +   +  ++     H  V I G+ +   + NALI  YAK  R
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 491

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I  + Q+F+ M  R+I++WNT+I G+ ++G   +    F E+      PD  T    LS+
Sbjct: 492 IDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA 551

Query: 497 CARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIE 550
           C+    +  GK       HGY     L  +M     M+ L ++ G LD +   + +M + 
Sbjct: 552 CSHSGLVIEGKHWFHVMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 551 KDTISWNALISA 562
            D   W AL+ A
Sbjct: 608 ADVRVWVALLGA 619



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/318 (20%), Positives = 123/318 (38%), Gaps = 80/318 (25%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  ++A  +F ++ +   ++PD  ++ + + AC++L     G   H   +  GL +  
Sbjct: 418 QNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + N ++ +Y     +   ++VF+ + + D+ SW T                        
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT------------------------ 512

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ-L 210
                  MI G   +G       LF EM+ L    D  +F  +LS C  +GL+  G+   
Sbjct: 513 -------MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H +    G +                             + Y+C       M+D L+  G
Sbjct: 566 HVMGHGYGLT--------------------------PRMEHYIC-------MVDLLSRGG 592

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA---YTS 324
            ++EA    + M    LR     +V+++ AC   +   +G +V     + G E    +  
Sbjct: 593 FLDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 649

Query: 325 VSNAAITMYSSCGKIDEA 342
           +SN    +YS+ G+ DEA
Sbjct: 650 LSN----IYSAAGRFDEA 663


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/629 (31%), Positives = 313/629 (49%), Gaps = 74/629 (11%)

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           H+DY   +F+ + + +  ++N MI    +         L++ M    +  DNY++  ++ 
Sbjct: 27  HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86

Query: 198 VCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C     E+  +Q+H+ V K GF   V V N LI  +  C N+ DAC+VF E+   V D 
Sbjct: 87  ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESS--VLDS 144

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMK 316
           +S+N ++ G   +G VEEA   +  M        E + ++                    
Sbjct: 145 VSWNSILAGYIEIGNVEEAKHIYHQM-------PERSIIA-------------------- 177

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
                    SN+ I ++   G + EAC +F  + EKD+V+W+ +I+ + Q  +   AI  
Sbjct: 178 ---------SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRT 228

Query: 377 YLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALI----- 428
           ++ M  +G+  DE    S L++      + M ++IH+     G  + I + NALI     
Sbjct: 229 FVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSK 288

Query: 429 --------------------------SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                                     S Y K   +  A  IF +M  +++++W+++I+G+
Sbjct: 289 CGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGY 348

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             N    + L  F E+ MS  +PDE TL   +S+CAR+++L  GK +H Y+ +N L   +
Sbjct: 349 AQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINV 408

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            LG  +I +Y KCG ++ +L VF  MIEK   +WNALI   A +G  + ++  F  M+  
Sbjct: 409 ILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKC 468

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             + P++ TF  VL AC H GLVD+G   F SM++D+   P   H  CM+DLLGRAG L 
Sbjct: 469 -HVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQ 527

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EAE ++N   +      W AL  AC  HG+  +GR +   L+E + D    +VLLSNIYA
Sbjct: 528 EAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYA 587

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + G W++   IR ++ +  V+K PGCS I
Sbjct: 588 SKGKWDDVLEIRGMMTKHRVLKIPGCSMI 616



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 232/519 (44%), Gaps = 77/519 (14%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           S+ L  D Y+    + AC+  R+     Q+H + L+ G  +  +V NT+++ +    ++ 
Sbjct: 71  SNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMT 130

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA--------------------------- 142
              RVF+E    D  SW + L+   ++G+V+ A                           
Sbjct: 131 DACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGL 190

Query: 143 ----CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
               C++FD+M ++D+  ++A+I    +N   +  I  F  MHK+ V  D     S LS 
Sbjct: 191 VVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSA 250

Query: 199 CDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           C A LL    G+ +HSL  K G    +++ NALI MY  CG+++ A K+F+EA  Y+ D 
Sbjct: 251 C-ANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEA--YLLDL 307

Query: 257 ISYNVMMDGLASVGRV-------------------------------EEALIRFRDMLVA 285
           IS+N M+ G      V                               +E L  F++M ++
Sbjct: 308 ISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMS 367

Query: 286 SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
             +P E T VSV+SAC        G  VHA   ++G      +    I MY  CG ++ A
Sbjct: 368 GFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETA 427

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
             +F  + EK I +WN +I   A   L  S++  +  M+   + P+E TF  +L +   +
Sbjct: 428 LEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHM 487

Query: 403 EMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNT 457
            +V+      ++ +  + I  N++    ++    +  ++++A ++ + M    ++ TW  
Sbjct: 488 GLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 547

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           L+     +G    G +   +L+  EL+PD     V LS+
Sbjct: 548 LLGACKKHGDSEMGRRVGRKLI--ELQPDHDGFHVLLSN 584



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/381 (27%), Positives = 188/381 (49%), Gaps = 19/381 (4%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++  Y++A+  FV +H    +  ++ ++S  L+ACANL     G  +H+ +L+ G
Sbjct: 213 IACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSA-LSACANLLVVNMGKLIHSLSLKIG 271

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++Y ++ N ++ +Y    D++  +++F E    D+ SW + +S   K   VD A  +FD
Sbjct: 272 TESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFD 331

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
            MP++D+  +++MI+G  +N   D  + LF+EM     + D  +  SV+S C     LE 
Sbjct: 332 SMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQ 391

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDG 265
           G+ +H+ + ++G +  V +   LI MY  CG V  A +VF    G +   IS +N ++ G
Sbjct: 392 GKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF---YGMIEKGISTWNALILG 448

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEA 321
           LA  G VE +L  F +M    + P+E+TF+ V+ AC    L     +  ++       + 
Sbjct: 449 LAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP 508

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMI---STYAQRNLGRSAILAY 377
                   + +    GK+ EA  +  R+    D+ +W  ++     +    +GR      
Sbjct: 509 NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 568

Query: 378 LEMQSVGIRPDEFTFGSLLAS 398
           +E+Q     PD   F  LL++
Sbjct: 569 IELQ-----PDHDGFHVLLSN 584


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 208/664 (31%), Positives = 338/664 (50%), Gaps = 46/664 (6%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMG 137
           +H   L  GL+    +  +++++Y   +D  S + VF       DVY W + +S  +K  
Sbjct: 26  VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                 EVF ++ +  + V                               D+++F +V+ 
Sbjct: 86  MFHDTLEVFKRLLNCSICV------------------------------PDSFTFPNVIK 115

Query: 198 VCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
              A   EF GR +H+LV KSG+ C V V ++L+ MY       ++ +VF+E      D 
Sbjct: 116 AYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER--DV 173

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
            S+N ++      G  E+AL  F  M  +   P+ ++    +SAC   L    G ++H +
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +K GFE    V++A + MY  C  ++ A  +F ++  K +V+WN+MI  Y  +   +S 
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +     M   G RP + T  S+L   + S  +   + IH +V  + +  +I V+ +LI  
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K      A  +F         +WN +I+ ++  G   + ++ + +++   ++PD  T 
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  L +C+++++L  GKQIH  + ++ L +   L +A++ +Y+KCG+   + R+FN + +
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           KD +SW  +ISAY  HG+ +EA+  F  MQ  G +KPD  T  AVLSAC HAGL+D+G +
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLK 532

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSAC 667
            F  M + YG  P  +H SCM+D+LGRAG L EA  +I  Q     SDN      LFSAC
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII--QQTPETSDNAELLSTLFSAC 590

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H    LG  IA LL+E   D  S Y++L N+YA+   W+ A  +R  +K  G+ K+PG
Sbjct: 591 CLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPG 650

Query: 728 CSWI 731
           CSWI
Sbjct: 651 CSWI 654



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 227/489 (46%), Gaps = 40/489 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S++  + D L +F ++ +     PD ++    + A   L     G  +H   +
Sbjct: 75  NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++G      VA++++ +Y       +  +VF E+   DV SW T +S   + G  + A E
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           +F +M                 +G+E                 ++ S    +S C   L 
Sbjct: 195 LFGRMES---------------SGFEP----------------NSVSLTVAISACSRLLW 223

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+++H    K GF     V +AL+ MY  C  +  A +VF++        +++N M+
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK--SLVAWNSMI 281

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G  + G  +  +     M++   RPS+ T  S++ AC   R    G  +H   ++S   
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           A   V+ + I +Y  CG+ + A  +F++ Q+    SWN MIS+Y        A+  Y +M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
            SVG++PD  TF S+L +   +  +E    IH  +  + + T+  + +AL+  Y+K    
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           K+A++IF+++  +++++W  +I+ +  +G P + L  F E+    L+PD  TL   LS+C
Sbjct: 462 KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521

Query: 498 ARISSLRHG 506
                +  G
Sbjct: 522 GHAGLIDEG 530



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 18/315 (5%)

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWN 456
           S+  +  ++++H  +   G+  ++ +  +LI+ Y   +    A  +F N   R ++  WN
Sbjct: 16  STKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWN 75

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSEL-RPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           +L++G+  N      L+ F  LL   +  PD +T    + +   +     G+ IH  V+K
Sbjct: 76  SLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK 135

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           +  +  + + ++++ +YAK    + SL+VF+ M E+D  SWN +IS + Q GE ++A+  
Sbjct: 136 SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALEL 195

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M+  G  +P+  + T  +SACS    ++ G  I    V   GF   E   S ++D+ 
Sbjct: 196 FGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMY 253

Query: 636 GRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLR-----LGRIIAGLLLEREQD 689
           G+   L+ A  V   Q +  +S   W ++     A G+ +     L R+I       E  
Sbjct: 254 GKCDCLEVAREVF--QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII------EGT 305

Query: 690 KPSVYVLLSNIYAAA 704
           +PS   L S + A +
Sbjct: 306 RPSQTTLTSILMACS 320



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 5/171 (2%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S T K++    N+ +++    G++  A+ ++ Q+ S   +KPD+ + ++ L AC+ L   
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAAL 426

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G Q+H     + L+    + + +L +Y    +     R+F+ I   DV SWT  +SA 
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486

Query: 134 TKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
              G    A   FD+M    L        A+++ C   G  D G+  F +M
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/681 (28%), Positives = 352/681 (51%), Gaps = 42/681 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S+S  +++C  L++ + G Q+    +++GL++   V N+++S++ N              
Sbjct: 263 SMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGN-------------- 308

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                            MG+VDYA  +F+++ +RD   +N+++    +NG+ +    +F 
Sbjct: 309 -----------------MGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFN 351

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M +     ++ + +++LSV  D    ++GR +H LV K GF  +V V N L+ MY   G
Sbjct: 352 LMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 411

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              +A  VF++      D IS+N +M    + GR  +AL     M+      + +TF S 
Sbjct: 412 RSEEADLVFKQMP--TKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSA 469

Query: 298 MSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           ++AC  P     G  +H   + SG      + NA ++MY   G +  +  +  ++  +D+
Sbjct: 470 LAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDV 529

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHA 410
           V+WN +I  YA+      A+ A+  ++  G+  +  T  S+L++       +E  + +HA
Sbjct: 530 VAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHA 589

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           ++   G  ++  V N+LI+ YAK   +  +  +F+ +  R+IITWN ++     +G   +
Sbjct: 590 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEE 649

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+  S++    L  D+++ S  LS+ A+++ L  G+Q+HG  +K        + NA   
Sbjct: 650 VLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAAD 709

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KCG++   +++    + +   SWN LISA  +HG  +E    F  M ++G IKP   
Sbjct: 710 MYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMG-IKPGHV 768

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++L+ACSH GLVD G   +D +  D+G  PA +H  C++DLLGR+G L EAE  I+ 
Sbjct: 769 TFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISK 828

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W +L ++C  H +L  GR  A  L + E +  SV+VL SN++A  G WE+ 
Sbjct: 829 MPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDV 888

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            N+R+ +    + K+  CSW+
Sbjct: 889 ENVRKQMGFKNIKKKQACSWV 909



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 181/668 (27%), Positives = 324/668 (48%), Gaps = 70/668 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF---GNQLHA 81
           N  ++ + R G Y + +  F Q      +KP  + +++ + AC   R+ +    G Q+H 
Sbjct: 128 NTMMSGIVRVGLYLEGMEFF-QKMCDLGIKPSSFVIASLVTACG--RSGSMFREGVQVHG 184

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           +  ++GL +  +V+  IL LY                    VY     L +C++      
Sbjct: 185 FVAKSGLLSDVYVSTAILHLY-------------------GVYG----LVSCSR------ 215

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
             +VF++MPDR++  + +++ G ++ G  +  I +++ M    V  +  S + V+S C  
Sbjct: 216 --KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSC-- 271

Query: 202 GLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           GLL+    GRQ+   V KSG    ++V N+LI+M+ N GNV  A  +F +      D IS
Sbjct: 272 GLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISER--DTIS 329

Query: 259 YNVMMDGLASVGRVEEA------LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA 312
           +N ++   A  G +EE+      + RF D + ++   +  T +SV+      + G  +H 
Sbjct: 330 WNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNST---TVSTLLSVLGDVDHQKWGRGIHG 386

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K GF++   V N  + MY+  G+ +EA ++F ++  KD++SWN++++++        
Sbjct: 387 LVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLD 446

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A+     M   G   +  TF S LA   S  F +   ++H  V ++G+  N  + NAL+S
Sbjct: 447 ALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVS 506

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   +  + ++   M  R+++ WN LI G+  N  P + L  F  L +  +  +  T
Sbjct: 507 MYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYIT 566

Query: 490 LSVALSSCARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           +   LS+C      L  GK +H Y++     S   + N++IT+YAKCGDL  S  +FN +
Sbjct: 567 VVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 626

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +  I+WNA+++A A HG G+E +     M+  G +  DQ +F+  LSA +   ++++G
Sbjct: 627 DNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFG-LSLDQFSFSEGLSAAAKLAVLEEG 685

Query: 609 TRIFDSMVNDYGFIPAEDHLSCML-----DLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
            ++    V   GF      L C +     D+  + G + E  +++    +     +W  L
Sbjct: 686 QQLHGLAVK-LGF-----ELDCFIFNAAADMYSKCGEIGEVVKMLPPS-VNRSLPSWNIL 738

Query: 664 FSACAAHG 671
            SA   HG
Sbjct: 739 ISALGRHG 746



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/554 (27%), Positives = 280/554 (50%), Gaps = 14/554 (2%)

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
           T ++  TK G V  A  +FDKMP R+   +N M++G    G    G+  F++M  L ++ 
Sbjct: 98  TLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKP 157

Query: 188 DNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            ++  AS+++ C     +   G Q+H  V KSG    V V  A++ +Y   G V  + KV
Sbjct: 158 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 217

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           FEE      + +S+  +M G +  G  EE +  ++ M    +  +E +   V+S+C   +
Sbjct: 218 FEEMPDR--NVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLK 275

Query: 306 ---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+  Q +KSG E+  +V N+ I+M+ + G +D A  IF ++ E+D +SWN++++
Sbjct: 276 DESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVA 335

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT 419
            YAQ      +   +  M+      +  T  +LL+  G ++  +    IH  V   G  +
Sbjct: 336 AYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDS 395

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            + V N L+  YA   R ++A  +F  M  +++I+WN+L+  F+ +G  +  L     ++
Sbjct: 396 VVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMI 455

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            +    +  T + AL++C        G+ +HG V+ + L     +GNA++++Y K G + 
Sbjct: 456 RTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMS 515

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            S RV   M  +D ++WNALI  YA++ +  +A++ F+ ++  G +  +  T  +VLSAC
Sbjct: 516 TSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEG-VSANYITVVSVLSAC 574

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-D 658
              G + +  +   + +   GF   E   + ++ +  + G L  ++ + N   +  RS  
Sbjct: 575 LVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG--LDNRSII 632

Query: 659 NWWALFSACAAHGN 672
            W A+ +A A HG+
Sbjct: 633 TWNAILAANAHHGH 646



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 216/449 (48%), Gaps = 11/449 (2%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR LH+L  K      V   N LI MY   G V  A  +F+  K  V + +S+N MM G+
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFD--KMPVRNEVSWNTMMSGI 134

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAY 322
             VG   E +  F+ M    ++PS     S+++AC       R G QVH    KSG  + 
Sbjct: 135 VRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 194

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             VS A + +Y   G +  +  +F  + ++++VSW +++  Y+ +      I  Y  M+ 
Sbjct: 195 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG 254

Query: 383 VGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G+  +E +   +++S G ++   +   I   V  +G+ + + V N+LIS +     +  
Sbjct: 255 EGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDY 314

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  IF+ +S R+ I+WN+++  +  NG   +  + F+ +       +  T+S  LS    
Sbjct: 315 ANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGD 374

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +   + G+ IHG V+K    S + + N ++ +YA  G  + +  VF  M  KD ISWN+L
Sbjct: 375 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSL 434

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++++   G   +A+    +M   G+   +  TFT+ L+AC      D G RI   +V   
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGK-SVNYVTFTSALAACFSPEFFDKG-RILHGLVVVS 492

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           G    +   + ++ + G+ G +  + RV+
Sbjct: 493 GLFDNQIIGNALVSMYGKIGGMSTSRRVL 521



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 5/166 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  LA  +  GH ++ L L  ++ S   L  D +S S  L+A A L     G QLH
Sbjct: 631 IITWNAILAANAHHGHGEEVLKLVSKMRS-FGLSLDQFSFSEGLSAAAKLAVLEEGQQLH 689

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ G +    + N    +Y    ++  V ++     N  + SW   +SA  + G+ +
Sbjct: 690 GLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 749

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
             CE F +M +  +      + +++T C+  G  D G+  +  + K
Sbjct: 750 EVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAK 795


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 213/720 (29%), Positives = 363/720 (50%), Gaps = 44/720 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           SK++ L  +I  ++ S +G YQ A   ++Q+ +S  L P+ +++   ++ CA L     G
Sbjct: 70  SKDIFLWNSIIQSHFS-NGDYQRAFDFYLQMRASSSL-PNQFTVPMVVSTCAELMMFNHG 127

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H    + GL     V N+ +                           ++F+   +K 
Sbjct: 128 MNIHGLTSKLGL----FVGNSAIG--------------------------SSFIYMYSKC 157

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           GHV+ A  +F ++  +D+  + A+I G  +N     G+    EMH++    +  +  S  
Sbjct: 158 GHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGF 217

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C D   L  G+ LH L  K+GF C   V + +++MY  CG+  +A + F   K    D
Sbjct: 218 QACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF--CKLDQKD 275

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF-VSVMSACLCPRV--GYQVHA 312
            IS+  ++   +  G + E L  F +M  + + P E+     +M      R+  G   HA
Sbjct: 276 LISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHA 335

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           + +K          NA ++MY   G +  A  IF     K    W+TMI  Y+       
Sbjct: 336 RILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEK 394

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
            I    EM  +G  PD  +  S+++S    G I +   IH +   N II N+ V+N+L+ 
Sbjct: 395 CISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMD 454

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K+  +   ++IFH    R++I+WNTLI+ +  +G   + +  F +++  ++ P++ T
Sbjct: 455 MYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVT 514

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
             + LS+CA ++SL  G++IH Y+ +N   S +++  A+I +YAKCG+L+ S ++FN   
Sbjct: 515 CIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE 574

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E+D I WN +IS Y  HG  + A+  F+ M++   IKP+  TF ++LSAC+H G V +G 
Sbjct: 575 ERDVILWNVMISNYGMHGHVESAMEIFQLMEE-SNIKPNAQTFLSLLSACNHTGHVLEGR 633

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            +FD M   YG  P+  H + ++DLLGR+G L+ AE ++ S  I      W +L SAC  
Sbjct: 634 HLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKI 692

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H    +G  +A   +E +      Y++LS++Y+  G W+E   +R+++K+ GV K+ G S
Sbjct: 693 HNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 752



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 288/593 (48%), Gaps = 19/593 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           ++  +F  +  +D+ ++N++I     NG        + +M       + ++   V+S C 
Sbjct: 60  FSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTC- 118

Query: 201 AGLLEF--GRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           A L+ F  G  +H L +K G F    ++ ++ I MY  CG+V  A  +F E    V D +
Sbjct: 119 AELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEIT--VKDVV 176

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           ++  ++ G          L    +M      P+  T  S   AC+       G  +H  A
Sbjct: 177 TWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLA 236

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K+GF  +  V +  ++MYS CG  +EA   F +L +KD++SW ++I+ +++  L    +
Sbjct: 237 LKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECL 296

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
             + EMQ+  I PDE     +L   G  + +   +  HA +       +    NAL+S Y
Sbjct: 297 HLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMY 356

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   +  A +IFH+   ++   W+T+I G+   G   + +    E+L+    PD  +L 
Sbjct: 357 CKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLV 415

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             +SSC+++ ++  G+ IH Y +KN++I  +S+ N+++ +Y K G +  + R+F+  +++
Sbjct: 416 SVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQR 475

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D ISWN LIS+Y Q G   EA+  F  M    ++ P++ T   VLSAC+H   +D+G +I
Sbjct: 476 DVISWNTLISSYKQSGILAEAIILFDKMVK-EKVYPNKVTCIIVLSACAHLASLDEGEKI 534

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
               + + GF       + ++D+  + G L+ + ++ NS   +     W  + S    HG
Sbjct: 535 -HQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISNYGMHG 592

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLKRTGV 722
           ++     I   L+E    KP+    LS + A    G   E  ++ + +++ G+
Sbjct: 593 HVESAMEIFQ-LMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGI 644



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 3/239 (1%)

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+ +   G   N+  +  L++ YA + +   +  +F  +  ++I  WN++I     NG  
Sbjct: 30  HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNA 527
            +    + ++  S   P+++T+ + +S+CA +    HG  IHG   K  L +   ++G++
Sbjct: 90  QRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSS 149

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            I +Y+KCG ++ +  +F+ +  KD ++W ALI  Y Q+ E    + C   M  +G   P
Sbjct: 150 FIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGG-TP 208

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           +  T  +   AC     + +G +    +    GF+  E   S +L +  R G  +EA R
Sbjct: 209 NYKTIGSGFQACVDLDALVEG-KCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYR 266


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 197/647 (30%), Positives = 339/647 (52%), Gaps = 15/647 (2%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           NT L  +K +  +  + +  ++I       D+   T      + +G + YA ++F  +  
Sbjct: 21  NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR 80

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVCDAGLLE--FGR 208
            D+ ++N ++ G + N      + +F  + K  D++ ++ ++A  +S   +G  +   GR
Sbjct: 81  PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA-SGFRDDRAGR 139

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H      G    + + + ++ MYF    V DA KVF+       D I +N M+ G   
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRK 197

Query: 269 VGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS 324
                E++  FRD++  S  R    T + ++ A       R+G Q+H+ A K+G  ++  
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V    I++YS CGKI     +F   ++ DIV++N MI  Y        ++  + E+   G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
            R    T  SL+  SG + ++  IH +   +  +++  VS AL + Y+K   I+ A ++F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                +++ +WN +I+G+  NG     +  F E+  SE  P+  T++  LS+CA++ +L 
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +H  V   +  S + +  A+I +YAKCG +  + R+F++M +K+ ++WN +IS Y 
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG+G+EA++ F  M + G I P   TF  VL ACSHAGLV +G  IF+SM++ YGF P+
Sbjct: 498 LHGQGQEALNIFYEMLNSG-ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H +CM+D+LGRAG+L  A + I +  I+  S  W  L  AC  H +  L R ++  L 
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF 616

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E + D    +VLLSNI++A   + +AA +R+  K+  + K PG + I
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 261/585 (44%), Gaps = 51/585 (8%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N+ +   S +     +L +F  +  S  LKP+  + +  ++A +  R+   G  +H  A
Sbjct: 86  FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  G  +   + + I+ +Y     +   ++VF  +   D   W T +S   K      + 
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
           +VF     RDL     +   CT                    R D  +   +L +V +  
Sbjct: 206 QVF-----RDL-----INESCT--------------------RLDTTTLLDILPAVAELQ 235

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G Q+HSL TK+G      V+   I++Y  CG +     +F E +    D ++YN M
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK--PDIVAYNAM 293

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           + G  S G  E +L  F++++++  R    T VS++       + Y +H   +KS F ++
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSH 353

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            SVS A  T+YS   +I+ A  +F    EK + SWN MIS Y Q  L   AI  + EMQ 
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413

Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
               P+  T   +L   A  G + + + +H  V      ++I VS ALI  YAK   I +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A ++F  M+ +N +TWNT+I+G+ L+G   + L  F E+L S + P   T    L +C+ 
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGDLDCSLRVFNMM-IEKD 552
              ++ G +I      N++I +     +      M+ +  + G L  +L+    M IE  
Sbjct: 534 AGLVKEGDEIF-----NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +  W  L+ A   H +   A +  + + +   + PD   +  +LS
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFE---LDPDNVGYHVLLS 630


>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 704

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/610 (31%), Positives = 335/610 (54%), Gaps = 34/610 (5%)

Query: 142 ACEVFDKMPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           A ++FD+MP ++   YNA+I   C ++ YE +   LF +M    +R +  +F S+L VC 
Sbjct: 62  AQKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVC- 120

Query: 201 AGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC--D 255
             LLE    G  LH  V + G+   + V   L+ MY +CG++  ACKVF    GY    D
Sbjct: 121 -CLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVF----GYAVEKD 175

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ-----V 310
            + +N M+ G     R++E+L  F +M+ +    ++ T    ++AC   ++GY      +
Sbjct: 176 DVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNAC--SKLGYYSQGRII 233

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HAQ + S     +++ NA + MY SCG    A  +F+R+Q   ++SWN+MIS +A+   G
Sbjct: 234 HAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEG 293

Query: 371 RSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
             A+  ++++  +   +PDE+TF ++++++G     +    +HA V   G+  ++ + NA
Sbjct: 294 EKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNA 353

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+S Y +N  ++ A  +F  M  ++++ W  +I G    G     ++ F ++     + D
Sbjct: 354 LLSMYFRNSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSD 413

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            + LS ALS CA ++ L+ G+ +H   +K    +++S+  +++ +YAK G+L  +  +F+
Sbjct: 414 SFALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFS 473

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            +   D   WN++I  Y+ HG  +EAV  F  + + G + PDQ TF ++LSAC+H+GLV+
Sbjct: 474 QVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECG-LTPDQVTFLSLLSACNHSGLVE 532

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI-----NSQHIQARSDNWW 661
            G  ++D M  + G  P   H SCM+ LL RAG LDEAE +I     + +H++     W 
Sbjct: 533 KGKFLWDYMKKN-GITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKL----WR 587

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L S+C    NL +G   A  +L  + +  + Y+LLSN+YA  G W+  A +R+ ++   
Sbjct: 588 TLLSSCVNRRNLTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLM 647

Query: 722 VIKQPGCSWI 731
           + K PG SWI
Sbjct: 648 LEKDPGVSWI 657



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 143/557 (25%), Positives = 252/557 (45%), Gaps = 55/557 (9%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
            +L+P+  + ++ L  C  L +   G+ LH   L+ G      V   +L +Y +  DL S
Sbjct: 104 QRLRPNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLES 163

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                          AC+VF    ++D   +N+MI+G  +N   
Sbjct: 164 -------------------------------ACKVFGYAVEKDDVFWNSMISGYLKNDRI 192

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
              + LF EM +       ++ +  L+ C   G    GR +H+ V  S      ++ NAL
Sbjct: 193 KESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDSALQNAL 252

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLR 288
           + MY++CG+   A  +F   +  +   IS+N M+   A     E+A+  F  +L +++ +
Sbjct: 253 LDMYYSCGDRRTALTLFSRIQ--IPSLISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCK 310

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E TF +++SA    R    G  +HAQ +K+G +    + NA ++MY     ++ A  +
Sbjct: 311 PDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGV 370

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG---SLLASSGFI 402
           F+ ++EKD+V W  MI  + +   G SAI  + +M+  G + D F      S+ A    +
Sbjct: 371 FSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAIL 430

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           +  +M+H      G    I V  +L+  YAKN  ++ A  IF  +   ++  WN++I G+
Sbjct: 431 KQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGGY 490

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +G   + +  F+E+L   L PD+ T    LS+C     +  GK +  Y+ KN +    
Sbjct: 491 SHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPGP 550

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS------WNALISAYAQHGEGKEAVSCF 576
              + M++L ++ G LD +      +I + T S      W  L+S+       +      
Sbjct: 551 KHYSCMVSLLSRAGLLDEA----EELITESTCSEEHLKLWRTLLSSCVNR---RNLTVGA 603

Query: 577 KAMQDVGRIKP-DQATF 592
           +A + V R+ P D AT+
Sbjct: 604 RAAKQVLRLDPEDSATY 620



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 157/290 (54%), Gaps = 8/290 (2%)

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           ++N  I MY+ CG   +A  +F R+  K+ +S+N +I+ Y + +      L++     +G
Sbjct: 45  LNNNLIAMYAHCGSRSDAQKLFDRMPRKNAISYNALIAAYCRDS--SYETLSFKLFSDMG 102

Query: 385 I---RPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           I   RP+  TF SLL     +E   +   +H  V   G + +I V   L+  Y+    ++
Sbjct: 103 IQRLRPNGATFTSLLQVCCLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLE 162

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F     ++ + WN++I+G+L N    + L  F E++ S     ++T S+AL++C+
Sbjct: 163 SACKVFGYAVEKDDVFWNSMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACS 222

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           ++     G+ IH  V+ +N++   +L NA++ +Y  CGD   +L +F+ +     ISWN+
Sbjct: 223 KLGYYSQGRIIHAQVIVSNILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNS 282

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
           +IS +A++ EG++A+  F  +  +   KPD+ TFTA++SA       D G
Sbjct: 283 MISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYG 332



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 228/502 (45%), Gaps = 55/502 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++   +++L LF ++  S  +    ++ S  L AC+ L   + G  +HA  + + +    
Sbjct: 188 KNDRIKESLSLFGEMVRSGTIFTQ-FTCSMALNACSKLGYYSQGRIIHAQVIVSNILPDS 246

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + N +L +Y +  D  +   +FS IQ P + SW                          
Sbjct: 247 ALQNALLDMYYSCGDRRTALTLFSRIQIPSLISW-------------------------- 280

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVC-DAGLLEFGRQL 210
                N+MI+   +N   +  +GLF ++  +   + D Y+F +++S   +    ++G+ L
Sbjct: 281 -----NSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPL 335

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLAS 268
           H+ V K+G    V + NAL++MYF   +V  A  VF   E K    D + +  M+ G   
Sbjct: 336 HAQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLMEEK----DVVLWTEMIMGHCR 391

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
           +G  E A+  F  M     +         +S C      + G  +H QA+K+G EA  SV
Sbjct: 392 LGDGESAIKLFCKMRQEGHKSDSFALSGALSVCADLAILKQGQMLHTQAVKTGCEAEISV 451

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             + + MY+  G +  A +IF+++   D+  WN+MI  Y+   +   A++ + E+   G+
Sbjct: 452 CGSLVDMYAKNGNLQAAQLIFSQVCNPDLKCWNSMIGGYSHHGMAEEAVMLFAEVLECGL 511

Query: 386 RPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            PD+ TF SLL++   SG +E  + +  ++  NGI    +  + ++S  ++   + +A +
Sbjct: 512 TPDQVTFLSLLSACNHSGLVEKGKFLWDYMKKNGITPGPKHYSCMVSLLSRAGLLDEAEE 571

Query: 443 IF--HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +      S  ++  W TL++  +       G +   ++L   L P++    + LS+   +
Sbjct: 572 LITESTCSEEHLKLWRTLLSSCVNRRNLTVGARAAKQVL--RLDPEDSATYILLSNLYAV 629

Query: 501 SSLRHG-----KQIHGYVLKNN 517
           +    G     K+I G +L+ +
Sbjct: 630 TGRWDGVAELRKKIRGLMLEKD 651



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 45/356 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  +++   + A+ LFV++      KPD Y+ +  ++A    R   +G  LH
Sbjct: 277 LISWNSMISWFAKNEEGEKAMGLFVKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLH 336

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  ++AGL+    + N +LS+Y    D+ + + VFS ++  DV  WT  +     MGH  
Sbjct: 337 AQVIKAGLQWSVFIGNALLSMYFRNSDVEAARGVFSLMEEKDVVLWTEMI-----MGH-- 389

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
             C + D                       +  I LF +M +   + D+++ +  LSVC 
Sbjct: 390 --CRLGDG----------------------ESAIKLFCKMRQEGHKSDSFALSGALSVCA 425

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC--DHI 257
           D  +L+ G+ LH+   K+G    +SV  +L+ MY   GN+  A  +F +    VC  D  
Sbjct: 426 DLAILKQGQMLHTQAVKTGCEAEISVCGSLVDMYAKNGNLQAAQLIFSQ----VCNPDLK 481

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQ 313
            +N M+ G +  G  EEA++ F ++L   L P ++TF+S++SAC    L  + G  +   
Sbjct: 482 CWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEK-GKFLWDY 540

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTYAQR 367
             K+G        +  +++ S  G +DEA  +       E+ +  W T++S+   R
Sbjct: 541 MKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNR 596


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/683 (29%), Positives = 349/683 (51%), Gaps = 46/683 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           S    L ACA LR+   G++LH+  ++ G  +   + N ++S+Y    DL + +R+F   
Sbjct: 147 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 206

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           Q                                 D  ++N++++  + +G     + LFR
Sbjct: 207 QEKG------------------------------DAVLWNSILSSYSTSGKSLETLELFR 236

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
           EMH      ++Y+  S L+ CD     + G+++H+ V KS   S  + V NALI MY  C
Sbjct: 237 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 296

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A ++  +      D +++N ++ G       +EAL  F DM+ A  +  E++  S
Sbjct: 297 GKMPQAERILRQMNN--ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 354

Query: 297 VMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +++A    R+     G ++HA  +K G+++   V N  I MYS C         F R+ +
Sbjct: 355 IIAAS--GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 412

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
           KD++SW T+I+ YAQ +    A+  + ++    +  DE   GS+L +S  ++   +V+ I
Sbjct: 413 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 472

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +   G++  + + N L+  Y K   +  A ++F ++  +++++W ++I+   LNG  
Sbjct: 473 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 531

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + ++ F  ++ + L  D   L   LS+ A +S+L  G++IH Y+L+     + S+  A+
Sbjct: 532 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 591

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +YA CGDL  +  VF+ +  K  + + ++I+AY  HG GK AV  F  M+    + PD
Sbjct: 592 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPD 650

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             +F A+L ACSHAGL+D+G      M ++Y   P  +H  C++D+LGRA  + EA   +
Sbjct: 651 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 710

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                +  ++ W AL +AC +H    +G I A  LLE E   P   VL+SN++A  G W 
Sbjct: 711 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 770

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +   +R  +K +G+ K PGCSWI
Sbjct: 771 DVEKVRAKMKASGMEKHPGCSWI 793



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/475 (30%), Positives = 250/475 (52%), Gaps = 17/475 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           N  V ++   L  C K   V    +VFD+MPDR    +N MI     NG     + L+  
Sbjct: 77  NSPVEAFAYVLELCGKRRAVSQE-KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWN 135

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           M    V     SF ++L  C A L +   G +LHSL+ K G+     +VNAL++MY    
Sbjct: 136 MRVEGVPLGLSSFPALLKAC-AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 194

Query: 238 NVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           ++  A ++F+  + KG   D + +N ++   ++ G+  E L  FR+M +    P+  T V
Sbjct: 195 DLSAARRLFDGFQEKG---DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 251

Query: 296 SVMSAC---LCPRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQE 351
           S ++AC      ++G ++HA  +KS   +    V NA I MY+ CGK+ +A  I  ++  
Sbjct: 252 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 311

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEM-I 408
            D+V+WN++I  Y Q  + + A+  + +M + G + DE +  S++A+SG +   +  M +
Sbjct: 312 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL 371

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA+V  +G  +N+QV N LI  Y+K        + F  M  +++I+W T+I G+  N   
Sbjct: 372 HAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCH 431

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
           V+ L+ F ++    +  DE  L   L + + + S+   K+IH ++L+  L+  + + N +
Sbjct: 432 VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNEL 490

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +Y KC ++  + RVF  +  KD +SW ++IS+ A +G   EAV  F+ M + G
Sbjct: 491 VDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG 545



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 121/562 (21%), Positives = 231/562 (41%), Gaps = 61/562 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L++ S SG   + L LF ++H +    P+ Y++ + L AC     A  G ++HA  L
Sbjct: 216 NSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVL 274

Query: 85  RAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++   +   +V N ++++Y     +   +R+  ++ N DV +W                 
Sbjct: 275 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW----------------- 317

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--A 201
                         N++I G  +N      +  F +M     + D  S  S+++     +
Sbjct: 318 --------------NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 363

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            LL  G +LH+ V K G+   + V N LI MY  C       + F   + +  D IS+  
Sbjct: 364 NLLA-GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTT 420

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           ++ G A      EAL  FRD+    +   E+   S++ A    +   +  ++H   ++ G
Sbjct: 421 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 480

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               T + N  + +Y  C  +  A  +F  ++ KD+VSW +MIS+ A       A+  + 
Sbjct: 481 L-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 539

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G+  D      +L+++  +  +     IH ++   G      ++ A++  YA   
Sbjct: 540 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 599

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A  +F  +  + ++ + ++IN + ++G     ++ F ++    + PD  +    L 
Sbjct: 600 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 659

Query: 496 SCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN---- 546
           +C+    L  G+       H Y L+             + L    G  +C +  F     
Sbjct: 660 ACSHAGLLDEGRGFLKIMEHEYELE-------PWPEHYVCLVDMLGRANCVVEAFEFVKM 712

Query: 547 MMIEKDTISWNALISAYAQHGE 568
           M  E     W AL++A   H E
Sbjct: 713 MKTEPTAEVWCALLAACRSHSE 734


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 214/676 (31%), Positives = 346/676 (51%), Gaps = 51/676 (7%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           +C N+ NA    +LHA  L  G      ++  +++LY    D+   +  F  I   +++S
Sbjct: 31  SCVNV-NAT--KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W + +SA  + G                   + AM   C    +   G G         +
Sbjct: 88  WNSIISAYVRFGK-----------------YHEAM--NCVNQLFSMCGGG--------HL 120

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R D Y+F  +L  C +  L  G+++H  V K GF   V V  +L+ +Y   G +  A KV
Sbjct: 121 RPDFYTFPPILKACVS--LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F +    V D  S+N M+ G    G    AL     M    ++   +T  S++  C    
Sbjct: 179 FVDMP--VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G  +H   +K G ++   VSNA I MYS  G++ +A M+F +++ +D+VSWN++I+
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII---- 418
            Y Q N   +A+  +  MQ  GIRPD  T  SL  +S F ++ +   +   +  +I    
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL--TSIFSQLSDQRISRSILGFVIRREW 354

Query: 419 --TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              ++ + NAL++ YAK   +  A+ +F  +  ++ I+WNTL+ G+  NG   + +  ++
Sbjct: 355 LDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYN 414

Query: 477 ELLMSELR---PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
             +M E R   P++ T    + + + + +L+ G +IH  ++KN+L   + +   +I LY 
Sbjct: 415 --MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYG 472

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG L+ ++ +F  +    ++ WNA+I++   HG G+EA+  FK M    R+K D  TF 
Sbjct: 473 KCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML-AERVKADHITFV 531

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           ++LSACSH+GLVD+G + FD M  +YG  P+  H  CM+DLLGRAGYL++A  ++ +  I
Sbjct: 532 SLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPI 591

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           Q  +  W AL SAC  +GN  LG + +  LLE + +    YVLLSNIYA    WE    +
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV 651

Query: 714 RELLKRTGVIKQPGCS 729
           R L +  G+ K PG S
Sbjct: 652 RSLARDRGLRKTPGWS 667



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 249/553 (45%), Gaps = 52/553 (9%)

Query: 33  RSGHYQDALHLFVQIHS---SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           R G Y +A++   Q+ S      L+PD Y+    L AC +L +   G ++H    + G +
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFE 153

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VA +++ LY     L    +VF ++   DV SW                       
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN---------------------- 191

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                    AMI+G  +NG     +G+   M    V+ D  + AS+L VC  +  +  G 
Sbjct: 192 ---------AMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H  V K G    V V NALI MY   G + DA  VF++ +  V D +S+N ++     
Sbjct: 243 LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQ 300

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSGF-EAYTS 324
                 AL  F+ M +  +RP  LT V   S+ S     R+   +    ++  + +    
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV- 383
           + NA + MY+  G ++ A  +F +L  KD +SWNT+++ Y Q  L   AI AY  M+   
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
              P++ T+ S++ +    G ++    IHA +  N +  ++ V+  LI  Y K  R++ A
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F+ +     + WN +I    ++G   + LQ F ++L   ++ D  T    LS+C+  
Sbjct: 481 MSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLR-VFNMMIEKDTISWN 557
             +  G++    + K   I K SL +   M+ L  + G L+ +   V NM I+ D   W 
Sbjct: 541 GLVDEGQKCFDIMQKEYGI-KPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 558 ALISAYAQHGEGK 570
           AL+SA   +G  +
Sbjct: 600 ALLSACKIYGNAE 612



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 199/389 (51%), Gaps = 20/389 (5%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           F ++ ++C+      ++HA  +  G      +S   I +Y + G I  +   F  + +K+
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSV----GIRPDEFTFGSLLASSGFIEMVEMIH 409
           I SWN++IS Y +      A+    ++ S+     +RPD +TF  +L +   +   + +H
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVH 144

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
             VF  G   ++ V+ +L+  Y++   +  A+++F +M  +++ +WN +I+GF  NG   
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L   + +    ++ D  T++  L  CA+   + +G  IH +VLK+ L S + + NA+I
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y+K G L  +  VF+ M  +D +SWN++I+AY Q+ +   A+  FK MQ +G I+PD 
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ-LGGIRPDL 323

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-------SCMLDLLGRAGYLD 642
            T  ++ S  S   L D   RI  S++   GF+   + L       + ++++  + GY++
Sbjct: 324 LTVVSLTSIFSQ--LSDQ--RISRSIL---GFVIRREWLDKDVVIGNALVNMYAKLGYMN 376

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHG 671
            A  V + Q  +  + +W  L +    +G
Sbjct: 377 CAHTVFD-QLPRKDTISWNTLVTGYTQNG 404



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
            +SC  +++    K++H  +L       + L   +I LY   GD+  S   F+ + +K+ 
Sbjct: 29  FNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 554 ISWNALISAYAQHGEGKEAVSCFK---AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            SWN++ISAY + G+  EA++C     +M   G ++PD  TF  +L AC    LV DG +
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLV-DGKK 142

Query: 611 ----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
               +F     D  F+ A      ++ L  R G LD A +V     ++    +W A+ S 
Sbjct: 143 VHCCVFKMGFEDDVFVAAS-----LVHLYSRYGVLDVAHKVFVDMPVKDVG-SWNAMISG 196

Query: 667 CAAHGN 672
              +GN
Sbjct: 197 FCQNGN 202


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/618 (32%), Positives = 318/618 (51%), Gaps = 27/618 (4%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMI---TGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           GH+  A  +FD++P  D+  YN +I   +  +     D G+ L+R M +  V  +NY+F 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAAD-GLHLYRRMLRHRVAPNNYTFP 129

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
             L  C A      GR +H     +G    + V  AL+ MY  C  + DA  +F      
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRF--RDMLVASLRPSELTFVSVMSACLCPRV---G 307
             D +++N M+ G A  G    A+       M +  LRP+  T V+++           G
Sbjct: 190 --DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 308 YQVHAQAM----------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
             VHA  +          KS       +  A + MY+ CG +  A  +F  +  ++ V+W
Sbjct: 248 TSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTW 307

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGI---RPDEFTFG-SLLASSGFIEMVEMIHAFVF 413
           + +I  +   +    A L +  M + G+    P          AS   + M E +HA + 
Sbjct: 308 SALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLA 367

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +G+  ++   N+L+S YAK   I QA  +F  M+ ++ ++++ L++G++ NG   +   
Sbjct: 368 KSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFL 427

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++    + PD  T+   + +C+ +++L+HG+  HG V+   L S+ S+ NA+I +YA
Sbjct: 428 VFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYA 487

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG +D S +VFNMM  +D +SWN +I+ Y  HG GKEA + F  M ++G   PD  TF 
Sbjct: 488 KCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG-FPPDGVTFI 546

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            +LSACSH+GLV +G   F  M + YG  P  +H  CM+DLL R G+LDEA   I S  +
Sbjct: 547 CLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPL 606

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +A    W AL  AC  + N+ LG+ ++ ++ E   +    +VLLSNIY+AAG ++EAA +
Sbjct: 607 RADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666

Query: 714 RELLKRTGVIKQPGCSWI 731
           R + K  G  K PGCSWI
Sbjct: 667 RIIQKVQGFKKSPGCSWI 684



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 254/552 (46%), Gaps = 68/552 (12%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           D LHL+ ++   H++ P+ Y+    L AC+ L +   G  +H +A+ AGL+A   V+  +
Sbjct: 108 DGLHLYRRM-LRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTAL 166

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L +Y     L            PD                   A  +F  MP RDL  +N
Sbjct: 167 LDMYVKCACL------------PD-------------------AAHIFATMPARDLVAWN 195

Query: 159 AMITGCTENGYEDIGIG----LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSL 213
           AM+ G   +G     +     +  +MH+L  R +  +  ++L  +   G L  G  +H+ 
Sbjct: 196 AMLAGYAHHGMYHHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALAQGTSVHAY 253

Query: 214 V----------TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
                      +KS  +  V +  AL+ MY  CG+++ A +VF+       + ++++ ++
Sbjct: 254 RIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALI 311

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGF 319
            G     R+ +A + F+ ML   L   S  +  S + AC      R+G Q+HA   KSG 
Sbjct: 312 GGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGV 371

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            A  +  N+ ++MY+  G ID+A  +F  +  KD VS++ ++S Y Q      A L + +
Sbjct: 372 HADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKK 431

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ+  + PD  T  SL+ +   +  ++     H  V I G+ +   + NALI  YAK  R
Sbjct: 432 MQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGR 491

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I  + Q+F+ M  R+I++WNT+I G+ ++G   +    F E+      PD  T    LS+
Sbjct: 492 IDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSA 551

Query: 497 CARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIE 550
           C+    +  GK       HGY     L  +M     M+ L ++ G LD +   + +M + 
Sbjct: 552 CSHSGLVIEGKHWFHVMRHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLR 607

Query: 551 KDTISWNALISA 562
            D   W AL+ A
Sbjct: 608 ADVRVWVALLGA 619



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 65/317 (20%), Positives = 124/317 (39%), Gaps = 78/317 (24%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  ++A  +F ++ +   ++PD  ++ + + AC++L     G   H   +  GL +  
Sbjct: 418 QNGRAEEAFLVFKKMQAC-NVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASET 476

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + N ++ +Y     +   ++VF+ + + D+ SW T                        
Sbjct: 477 SICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNT------------------------ 512

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
                  MI G   +G       LF EM+ L    D  +F  +LS C  +GL+  G+   
Sbjct: 513 -------MIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWF 565

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
             V + G+                         +    + Y+C       M+D L+  G 
Sbjct: 566 H-VMRHGYG------------------------LTPRMEHYIC-------MVDLLSRGGF 593

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA---YTSV 325
           ++EA    + M    LR     +V+++ AC   +   +G +V     + G E    +  +
Sbjct: 594 LDEAYEFIQSM---PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLL 650

Query: 326 SNAAITMYSSCGKIDEA 342
           SN    +YS+ G+ DEA
Sbjct: 651 SN----IYSAAGRFDEA 663


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 199/616 (32%), Positives = 334/616 (54%), Gaps = 13/616 (2%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +V  ++ +P +   T  L      G ++ A ++FD+M   D  V+N MI G T  G    
Sbjct: 53  KVTKQLNDPAL---TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFE 109

Query: 173 GIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + L+  M    V+ D++++  V+ SV     LE G+++H++V K  F   V V N+LI+
Sbjct: 110 ALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLIS 169

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           +Y   G   DA KVFEE      D +S+N M+ G  ++     +L+ F++ML    +P  
Sbjct: 170 LYMKLGCSWDAEKVFEEMPER--DIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDR 227

Query: 292 LTFVSVMSAC---LCPRVGYQVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMIFA 347
            + +S + AC     P +G ++H  A++S  E     V  + + MYS  G++  A  IF 
Sbjct: 228 FSTMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFK 287

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIEMVE 406
            + +++IV+WN +I  YA+ +    A L + +M +  G++PD  T  +LL +   +E   
Sbjct: 288 CIIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEG-R 346

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH +    G + +I +  ALI  Y +  ++K A  IF  ++ +N+I+WN++I  ++ NG
Sbjct: 347 TIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNG 406

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
                L+ F +L  S L PD  T++  L + A   SL  G+QIH Y++K+   S   + N
Sbjct: 407 KNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILN 466

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           +++ +YA CGDL+ + + FN ++ KD +SWN++I AYA HG G+ +V  F  M    ++ 
Sbjct: 467 SLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMI-ASKVD 525

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P+++TF ++L+ACS +G+VD+G   F+SM  +YG  P  +H   MLDL+GR G    A+R
Sbjct: 526 PNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKR 585

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I        +  W +L +A   H ++ +    A  + + E D    YVLL N+YA A  
Sbjct: 586 FIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARR 645

Query: 707 WEEAANIRELLKRTGV 722
           WE+   I+ L++  G+
Sbjct: 646 WEDVNRIKLLMESKGI 661



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 141/601 (23%), Positives = 277/601 (46%), Gaps = 57/601 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   +  G Y +AL L+ ++  S  +K D ++    + +   + +   G ++HA  +
Sbjct: 95  NVMIKGFTSCGLYFEALQLYCRMVFS-GVKADSFTYPFVIKSVTGISSLEEGKKIHAMVI 153

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +    +  +V N+++SLY         ++VF E+   D+ SW                  
Sbjct: 154 KLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSW------------------ 195

Query: 145 VFDKMPDRDLPVYNAMITG--CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-A 201
                        N+MI+G    E+G+    + LF+EM K   + D +S  S L  C   
Sbjct: 196 -------------NSMISGYLALEDGFR--SLMLFKEMLKFGFKPDRFSTMSALGACSHV 240

Query: 202 GLLEFGRQLHSLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVC----DH 256
                G++LH    +S      V V+ +++ MY   G V  A ++F+      C    + 
Sbjct: 241 YSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFK------CIIQRNI 294

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQAM 315
           +++NV++   A   RV +A + F+ M   + L+P  +T ++++ AC     G  +H  AM
Sbjct: 295 VAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE-GRTIHGYAM 353

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           + GF  +  +  A I MY   G++  A +IF R+ EK+++SWN++I+ Y Q     SA+ 
Sbjct: 354 RRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALE 413

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + ++    + PD  T  S+L   A S  +     IHA++  +   +N  + N+L+  YA
Sbjct: 414 LFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYA 473

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
               ++ A + F+++  +++++WN++I  + ++GF    +  FSE++ S++ P++ T + 
Sbjct: 474 MCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFAS 533

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
            L++C+    +  G +    + +   I   +     M+ L  + G+   + R    M   
Sbjct: 534 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFL 593

Query: 552 DTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            T   W +L++A   H +    V+ F A Q       +   +  +L+  + A   +D  R
Sbjct: 594 PTARIWGSLLNASRNHND--ITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNR 651

Query: 611 I 611
           I
Sbjct: 652 I 652



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 48/287 (16%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N+ +   +R+    DA   F ++   + L+PD+ +L   L ACA L     G  +H
Sbjct: 294 IVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIH 349

Query: 81  AYALRAGLKAYPHVA--NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
            YA+R G    PH+     ++ +Y     L S + +F  I   ++ SW + ++A  + G 
Sbjct: 350 GYAMRRGF--LPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGK 407

Query: 139 VDYACEVFDKMPDRD-LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
              A E+F K+ D   LP                                D+ + AS+L 
Sbjct: 408 NYSALELFQKLWDSSLLP--------------------------------DSTTIASILP 435

Query: 198 VCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
                L L  GRQ+H+ + KS +     ++N+L+ MY  CG++ DA K F      + D 
Sbjct: 436 AYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHV--LLKDV 493

Query: 257 ISYN--VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +S+N  +M   +   GR+   L  F +M+ + + P++ TF S+++AC
Sbjct: 494 VSWNSIIMAYAVHGFGRISVCL--FSEMIASKVDPNKSTFASLLAAC 538



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 5/166 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A   ++G    AL LF ++  S  L PD  ++++ L A A   + + G Q+H
Sbjct: 392 LISWNSIIAAYVQNGKNYSALELFQKLWDS-SLLPDSTTIASILPAYAESLSLSEGRQIH 450

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           AY +++   +   + N+++ +Y    DL   ++ F+ +   DV SW + + A    G   
Sbjct: 451 AYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGR 510

Query: 141 YACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
            +  +F +M     D +   + +++  C+ +G  D G   F  M +
Sbjct: 511 ISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKR 556


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 216/676 (31%), Positives = 346/676 (51%), Gaps = 51/676 (7%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           +C N+ NA    +LHA  L  G      ++  +++LY    D+   +  F  I   +++S
Sbjct: 31  SCVNV-NAT--KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W + +SA  + G                   + AM   C    +   G G         +
Sbjct: 88  WNSIISAYVRFGK-----------------YHEAM--NCVNQLFSMCGGG--------HL 120

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           R D Y+F  +L  C +  L  G+++H  V K GF   V V  +L+ +Y   G +  A KV
Sbjct: 121 RPDFYTFPPILKACVS--LVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F +    V D  S+N M+ G    G    AL     M    ++   +T  S++  C    
Sbjct: 179 FVDMP--VKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSD 236

Query: 306 V---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G  +H   +K G ++   VSNA I MYS  G++ +A M+F +++ +D+VSWN++I+
Sbjct: 237 DVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGI 417
            Y Q N   +A+  +  MQ  GIRPD  T  SL  +S F ++ +      I  FV     
Sbjct: 297 AYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSL--TSIFSQLSDQRISRSILGFVIRREW 354

Query: 418 I-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  ++ + NAL++ YAK   +  A+ +F  +  ++ I+WNTL+ G+  NG   + +  ++
Sbjct: 355 LDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYN 414

Query: 477 ELLMSELR---PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
             +M E R   P++ T    + + + + +L+ G +IH  ++KN+L   + +   +I LY 
Sbjct: 415 --MMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYG 472

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG L+ ++ +F  +    ++ WNA+I++   HG G+EA+  FK M    R+K D  TF 
Sbjct: 473 KCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDML-AERVKADHITFV 531

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           ++LSACSH+GLVD+G + FD M  +YG  P+  H  CM+DLLGRAGYL++A  ++ +  I
Sbjct: 532 SLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPI 591

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           Q  +  W AL SAC  +GN  LG + +  LLE + +    YVLLSNIYA    WE    +
Sbjct: 592 QPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKV 651

Query: 714 RELLKRTGVIKQPGCS 729
           R L +  G+ K PG S
Sbjct: 652 RSLARDRGLRKTPGWS 667



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 149/553 (26%), Positives = 249/553 (45%), Gaps = 52/553 (9%)

Query: 33  RSGHYQDALHLFVQIHS---SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           R G Y +A++   Q+ S      L+PD Y+    L AC +L +   G ++H    + G +
Sbjct: 97  RFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFE 153

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VA +++ LY     L    +VF ++   DV SW                       
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN---------------------- 191

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                    AMI+G  +NG     +G+   M    V+ D  + AS+L VC  +  +  G 
Sbjct: 192 ---------AMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H  V K G    V V NALI MY   G + DA  VF++ +  V D +S+N ++     
Sbjct: 243 LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQME--VRDLVSWNSIIAAYEQ 300

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSGF-EAYTS 324
                 AL  F+ M +  +RP  LT V   S+ S     R+   +    ++  + +    
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV- 383
           + NA + MY+  G ++ A  +F +L  KD +SWNT+++ Y Q  L   AI AY  M+   
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
              P++ T+ S++ +    G ++    IHA +  N +  ++ V+  LI  Y K  R++ A
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F+ +     + WN +I    ++G   + LQ F ++L   ++ D  T    LS+C+  
Sbjct: 481 MSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHS 540

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLR-VFNMMIEKDTISWN 557
             +  G++    + K   I K SL +   M+ L  + G L+ +   V NM I+ D   W 
Sbjct: 541 GLVDEGQKCFDIMQKEYGI-KPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 558 ALISAYAQHGEGK 570
           AL+SA   +G  +
Sbjct: 600 ALLSACKIYGNAE 612



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 199/389 (51%), Gaps = 20/389 (5%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           F ++ ++C+      ++HA  +  G      +S   I +Y + G I  +   F  + +K+
Sbjct: 25  FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSV----GIRPDEFTFGSLLASSGFIEMVEMIH 409
           I SWN++IS Y +      A+    ++ S+     +RPD +TF  +L +   +   + +H
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVH 144

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
             VF  G   ++ V+ +L+  Y++   +  A+++F +M  +++ +WN +I+GF  NG   
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAA 204

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L   + +    ++ D  T++  L  CA+   + +G  IH +VLK+ L S + + NA+I
Sbjct: 205 GALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALI 264

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y+K G L  +  VF+ M  +D +SWN++I+AY Q+ +   A+  FK MQ +G I+PD 
Sbjct: 265 NMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ-LGGIRPDL 323

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-------SCMLDLLGRAGYLD 642
            T  ++ S  S   L D   RI  S++   GF+   + L       + ++++  + GY++
Sbjct: 324 LTVVSLTSIFSQ--LSDQ--RISRSIL---GFVIRREWLDKDVVIGNALVNMYAKLGYMN 376

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHG 671
            A  V + Q  +  + +W  L +    +G
Sbjct: 377 CAHTVFD-QLPRKDTISWNTLVTGYTQNG 404



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
            +SC  +++    K++H  +L       + L   +I LY   GD+  S   F+ + +K+ 
Sbjct: 29  FNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNI 85

Query: 554 ISWNALISAYAQHGEGKEAVSCFK---AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            SWN++ISAY + G+  EA++C     +M   G ++PD  TF  +L AC    LV DG +
Sbjct: 86  FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC--VSLV-DGKK 142

Query: 611 ----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
               +F     D  F+ A      ++ L  R G LD A +V     ++    +W A+ S 
Sbjct: 143 VHCCVFKMGFEDDVFVAAS-----LVHLYSRYGVLDVAHKVFVDMPVKDVG-SWNAMISG 196

Query: 667 CAAHGN 672
              +GN
Sbjct: 197 FCQNGN 202


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 214/693 (30%), Positives = 357/693 (51%), Gaps = 36/693 (5%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D   LS  L  C N+ +    + L +++       Y H+   I+   +N  D ++ K + 
Sbjct: 9   DSTKLSQLLHQCRNIHHQQCLSALDSHS-------YAHMLQQII---RNGADPIAGKHLH 58

Query: 116 SEI----QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             I     + D+++    L+   +   +  A ++FD+MP  +   +  +  G + +    
Sbjct: 59  CHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFH 118

Query: 172 IGIG----LFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVV 226
             +     +F+E H+++     + F ++L +     L      LH+ V K G      V 
Sbjct: 119 QALHFILRIFKEGHEVN----PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG 174

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLV 284
            ALI  Y   GNV  A  VF++    +C  D +S+  M+   A     EE+L  F  M +
Sbjct: 175 TALIDAYSVRGNVDVARHVFDD----ICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
              +P+  T    + +CL      VG  VH  A+K  ++    V  A + +Y+  G+I +
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIID 290

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
           A  +F  + + D++ W+ MI+ YAQ +  + A+  +L M+   + P+ FTF S+L   AS
Sbjct: 291 AQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACAS 350

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           S  +++ + IH+ V   G+ +N+ VSNA++  YAK   I+ + ++F  +  RN +TWNT+
Sbjct: 351 SVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTI 410

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I G++  G   + +  F+ +L  +++P E T S  L + A +++L  G QIH   +K   
Sbjct: 411 IVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMY 470

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                + N++I +YAKCG ++ +   F+ M ++D +SWNA+I  Y+ HG   EA++ F  
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDM 530

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           MQ     KP++ TF  VLSACS+AGL+  G   F+SM  DY   P  +H +CM+ LLGR 
Sbjct: 531 MQHTD-CKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRL 589

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G  DEA ++I     Q     W AL  AC  H  + LGR+ A  +LE E    + +VLLS
Sbjct: 590 GRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLS 649

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+YA AG W+  A +R+ +++  V K+PG SW+
Sbjct: 650 NMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWV 682


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 201/715 (28%), Positives = 352/715 (49%), Gaps = 45/715 (6%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N  ++ LS  G +   L  ++ +  +H  + D Y+  +   AC NL   + G  LH   
Sbjct: 17  FNSLVSRLSYQGAHHQVLQTYISMQKTHT-QLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  GL    ++ ++++S Y                                K G +    
Sbjct: 76  VVNGLSHDSYIGSSLISFY-------------------------------AKFGCIHLGR 104

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD M  R++  +  +I   +  G  DI   +F++M +  ++  + +  S+L       
Sbjct: 105 KVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLP--GISK 162

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVM 262
           L     LH L+   GF   +++ N+++ MY  CG + DA ++FE      C D +S+N +
Sbjct: 163 LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFESIG---CRDIVSWNSL 219

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           +   + +G  EE L   + M +  ++P + TF S +SA       R+G  VH   +K G 
Sbjct: 220 LSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGL 279

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A + +Y  C  +D A  +F    EKD+V W  MIS   Q +    A+  + +
Sbjct: 280 NIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQ 339

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M    ++P   T  S LA+    G  ++   IH +V   GI+ +I   N+L++ YAK  +
Sbjct: 340 MIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNK 399

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++Q+  IF+ M  +++++WN ++ G   NG+  +G+  F+E+  S LRPD  T++  L +
Sbjct: 400 LQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQA 459

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C    +L  GK IH +VL+++LI  +    A++ +Y KCG+L+ + + F+ M+++D ++W
Sbjct: 460 CGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAW 519

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           + LI  Y  +G+G+ A+  +      G ++P+   F +VLSACSH GL+  G  I++SM 
Sbjct: 520 STLIVGYGFNGKGEIALRKYSEFLGTG-MEPNHVIFISVLSACSHGGLISKGLSIYESMT 578

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D+   P  +H +C++DLL RAG +DEA         +        L  AC  +G + LG
Sbjct: 579 KDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELG 638

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++IA  + E +   P  +V L+N YA+   W+        ++  G+ K PG S I
Sbjct: 639 KVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 212/425 (49%), Gaps = 12/425 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           S+N ++  L+  G   + L  +  M     +    TF S+  AC    +   G  +H   
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           + +G    + + ++ I+ Y+  G I     +F  + ++++V W T+I +Y++      A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             + +M+  GI+P   T  SLL     + ++  +H  + ++G  +++ +SN++++ Y K 
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKC 195

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI  A ++F ++  R+I++WN+L++ +   G   + LQ    + + +++PD+ T   AL
Sbjct: 196 GRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSAL 255

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S+ A    LR GK +HG +LK+ L     + +A++ LY +C  LD + +VF    EKD +
Sbjct: 256 SASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVV 315

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
            W A+IS   Q+    +A+  F  M +   +KP  AT  + L+AC+  G  D G  I   
Sbjct: 316 MWTAMISGLVQNDCADKALGVFYQMIE-SNVKPSTATLASGLAACAQLGCCDIGASIHGY 374

Query: 615 MVNDYGF---IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           ++   G    IPA++ L  M     +   L ++  + N + ++    +W A+ +  A +G
Sbjct: 375 VLRQ-GIMLDIPAQNSLVTM---YAKCNKLQQSCSIFN-KMVEKDLVSWNAIVAGHAKNG 429

Query: 672 NLRLG 676
            L  G
Sbjct: 430 YLSKG 434



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 207/478 (43%), Gaps = 53/478 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  L+  S+ G  ++ L L +Q      +KPD  +  + L+A A   +   G  +H
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQL-LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVH 271

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L+ GL    HV + ++ LY   R L    +VF      DV  WT             
Sbjct: 272 GLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWT------------- 318

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  +N   D  +G+F +M + +V+    + AS L+ C 
Sbjct: 319 ------------------AMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G  + G  +H  V + G    +   N+L+TMY  C  +  +C +F   K    D +S+
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFN--KMVEKDLVSW 418

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQA 314
           N ++ G A  G + + +  F +M  + LRP  +T  S++ AC     LC   G  +H   
Sbjct: 419 NAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQ--GKWIHNFV 476

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           ++S          A + MY  CG ++ A   F  + ++D+V+W+T+I  Y     G  A+
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIIT-NIQVSNALISA 430
             Y E    G+ P+   F S+L++    G I     I+  +  +  ++ N++    ++  
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDL 596

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRP 485
            ++  ++ +AY  +  M     I    ++ G LL+   V G     +++   M EL+P
Sbjct: 597 LSRAGKVDEAYSFYKMMFKEPSI----VVLGMLLDACRVNGRVELGKVIARDMFELKP 650



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 65/361 (18%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
            S T K++++   + ++ L ++     AL +F Q+  S+ +KP   +L++ LAACA L  
Sbjct: 307 KSTTEKDVVMWTAM-ISGLVQNDCADKALGVFYQMIESN-VKPSTATLASGLAACAQLGC 364

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
              G  +H Y LR G+       N+++++Y     L     +F+++   D+ SW      
Sbjct: 365 CDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSW------ 418

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
                                    NA++ G  +NGY   GI  F EM K  +R D+ + 
Sbjct: 419 -------------------------NAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITV 453

Query: 193 ASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            S+L  C  AG L  G+ +H+ V +S     +    AL+ MYF CGN+ +A K F+    
Sbjct: 454 TSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFD---- 509

Query: 252 YVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG 307
             C    D ++++ ++ G    G+ E AL ++ + L   + P+ + F+SV+SAC      
Sbjct: 510 --CMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSAC------ 561

Query: 308 YQVHAQAMKSGFEAYTSVSN------------AAITMYSSCGKIDEACMIFARL-QEKDI 354
              H   +  G   Y S++               + + S  GK+DEA   +  + +E  I
Sbjct: 562 --SHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSI 619

Query: 355 V 355
           V
Sbjct: 620 V 620


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 213/720 (29%), Positives = 363/720 (50%), Gaps = 44/720 (6%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           SK++ L  +I  ++ S +G YQ A   ++Q+ +S  L P+ +++   ++ CA L     G
Sbjct: 100 SKDIFLWNSIIQSHFS-NGDYQRAFDFYLQMRASSSL-PNQFTVPMVVSTCAELMMFNHG 157

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H    + GL     V N+ +                           ++F+   +K 
Sbjct: 158 MNIHGLTSKLGL----FVGNSAIG--------------------------SSFIYMYSKC 187

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           GHV+ A  +F ++  +D+  + A+I G  +N     G+    EMH++    +  +  S  
Sbjct: 188 GHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGF 247

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C D   L  G+ LH L  K+GF C   V + +++MY  CG+  +A + F   K    D
Sbjct: 248 QACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCF--CKLDQKD 305

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF-VSVMSACLCPRV--GYQVHA 312
            IS+  ++   +  G + E L  F +M  + + P E+     +M      R+  G   HA
Sbjct: 306 LISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHA 365

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           + +K          NA ++MY   G +  A  IF     K    W+TMI  Y+       
Sbjct: 366 RILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEK 424

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
            I    EM  +G  PD  +  S+++S    G I +   IH +   N II N+ V+N+L+ 
Sbjct: 425 CISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMD 484

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K+  +   ++IFH    R++I+WNTLI+ +  +G   + +  F +++  ++ P++ T
Sbjct: 485 MYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVT 544

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
             + LS+CA ++SL  G++IH Y+ +N   S +++  A+I +YAKCG+L+ S ++FN   
Sbjct: 545 CIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE 604

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E+D I WN +IS Y  HG  + A+  F+ M++   IKP+  TF ++LSAC+H G V +G 
Sbjct: 605 ERDVILWNVMISNYGMHGHVESAMEIFQLMEE-SNIKPNAQTFLSLLSACNHTGHVLEGR 663

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            +FD M   YG  P+  H + ++DLLGR+G L+ AE ++ S  I      W +L SAC  
Sbjct: 664 HLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKI 722

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H    +G  +A   +E +      Y++LS++Y+  G W+E   +R+++K+ GV K+ G S
Sbjct: 723 HNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 782



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/593 (26%), Positives = 288/593 (48%), Gaps = 19/593 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           ++  +F  +  +D+ ++N++I     NG        + +M       + ++   V+S C 
Sbjct: 90  FSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTC- 148

Query: 201 AGLLEF--GRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           A L+ F  G  +H L +K G F    ++ ++ I MY  CG+V  A  +F E    V D +
Sbjct: 149 AELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEIT--VKDVV 206

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           ++  ++ G          L    +M      P+  T  S   AC+       G  +H  A
Sbjct: 207 TWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLA 266

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K+GF  +  V +  ++MYS CG  +EA   F +L +KD++SW ++I+ +++  L    +
Sbjct: 267 LKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECL 326

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
             + EMQ+  I PDE     +L   G  + +   +  HA +       +    NAL+S Y
Sbjct: 327 HLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMY 386

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            K   +  A +IFH+   ++   W+T+I G+   G   + +    E+L+    PD  +L 
Sbjct: 387 CKFGHLGTANKIFHSFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLV 445

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             +SSC+++ ++  G+ IH Y +KN++I  +S+ N+++ +Y K G +  + R+F+  +++
Sbjct: 446 SVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQR 505

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D ISWN LIS+Y Q G   EA+  F  M    ++ P++ T   VLSAC+H   +D+G +I
Sbjct: 506 DVISWNTLISSYKQSGILAEAIILFDKMVK-EKVYPNKVTCIIVLSACAHLASLDEGEKI 564

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
               + + GF       + ++D+  + G L+ + ++ NS   +     W  + S    HG
Sbjct: 565 -HQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTE-ERDVILWNVMISNYGMHG 622

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLKRTGV 722
           ++     I   L+E    KP+    LS + A    G   E  ++ + +++ G+
Sbjct: 623 HVESAMEIFQ-LMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRMQKYGI 674



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 186/397 (46%), Gaps = 10/397 (2%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q H+  + +G       +   +  Y+   K   +  +F  +  KDI  WN++I ++    
Sbjct: 58  QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 117

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGI-ITNIQVS 424
             + A   YL+M++    P++FT   ++++   + M      IH      G+ + N  + 
Sbjct: 118 DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 177

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           ++ I  Y+K   ++ A  +F  ++ ++++TW  LI G++ N    +GL+   E+      
Sbjct: 178 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 237

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P+  T+     +C  + +L  GK +HG  LKN  +    + + ++++Y++CG  + + R 
Sbjct: 238 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 297

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F  + +KD ISW ++I+ +++ G   E +  F  MQ    I PD+   + +L    ++  
Sbjct: 298 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQ-ASEIIPDEIVISCMLMGFGNSDR 356

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           + +G      ++     +    H + +L +  + G+L  A ++ +S H    S++W  + 
Sbjct: 357 IFEGKAFHARILKQCCALSGITH-NALLSMYCKFGHLGTANKIFHSFH--KSSEDWSTMI 413

Query: 665 SACAAHGNLR--LGRIIAGLLLEREQDKPSVYVLLSN 699
              +  G     +  +   LLL RE D  S+  ++S+
Sbjct: 414 LGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISS 450


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  329 bits (844), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 181/531 (34%), Positives = 294/531 (55%), Gaps = 10/531 (1%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +H  + K GF    +V NALI+ Y     + DA  VF+E      D IS+N ++ G 
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQR--DIISWNSIIGGC 60

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           AS G  ++A+  F  M +        T +SVM AC+      +G  VH  ++++G  + T
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S+ NA + MYS+C        IF  +++K++VSW  MI++Y +          + EM   
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GIRPD F   S L   A +  ++  + +H +   NGI   + V+NAL+  Y K   +++A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             IF +++ ++ I+WNTLI G+  +    +    F+E+L+ +LRP+  T++  L + A +
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASL 299

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           SSL  G+++H Y ++   +    + NA++ +Y KCG L  + R+F+M+  K+ ISW  +I
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + Y  HG G++A++ F+ M+  G I+PD  +F+A+L ACSH+GL D+G R F++M N++ 
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSG-IQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHR 418

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P   H +CM+DLL   G L EA   I +  I+  S  W +L   C  H N++L   +A
Sbjct: 419 IEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVA 478

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            ++ E E +    YVLL+NIYA A  WE    ++  +   G+ +  GCSWI
Sbjct: 479 EMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWI 529



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 225/483 (46%), Gaps = 21/483 (4%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
              +S   K   ++ A  VFD+MP RD+  +N++I GC  NG  D  + LF  M      
Sbjct: 23  NALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQE 82

Query: 187 RDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D+ +  SV+  C      F G  +H    ++G     S+ NAL+ MY NC +     K+
Sbjct: 83  LDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142

Query: 246 FE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL- 302
           F   E K  V    S+  M+      G  ++    F++M +  +RP      S + A   
Sbjct: 143 FRNMEQKNVV----SWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAG 198

Query: 303 --CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               + G  VH  A+++G E    V+NA + MY  CG ++EA  IF  + +KD +SWNT+
Sbjct: 199 NESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTL 258

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGI 417
           I  Y++ NL   A   + EM  + +RP+  T   +L ++  +  +E    +HA+    G 
Sbjct: 259 IGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGY 317

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + +  V+NAL+  Y K   +  A ++F  ++ +N+I+W  +I G+ ++G     +  F +
Sbjct: 318 LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQ 377

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKC 535
           +  S ++PD  + S  L +C+  S LR         ++N   +  K+     M+ L    
Sbjct: 378 MKGSGIQPDAGSFSAILYACSH-SGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHT 436

Query: 536 GDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           G+L  +      M IE D+  W +L+     H   K A    K  + V  ++P+   +  
Sbjct: 437 GNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAE---KVAEMVFELEPENTGYYV 493

Query: 595 VLS 597
           +L+
Sbjct: 494 LLA 496



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/493 (25%), Positives = 225/493 (45%), Gaps = 62/493 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   + +G Y  A+ LFV++    + + D  +L + + AC     +  G  +H
Sbjct: 50  IISWNSIIGGCASNGLYDKAVELFVRMWLEGQ-ELDSTTLLSVMPACVQSHYSFIGGVVH 108

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y++R GL +   + N +L +Y N  D  S  ++F  ++  +V SWT  +++ T+ GH  
Sbjct: 109 GYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGH-- 166

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                FDK+                         GLF+EM    +R D ++  S L    
Sbjct: 167 -----FDKVA------------------------GLFQEMGLEGIRPDVFAITSALDAFA 197

Query: 201 AGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L+ G+ +H    ++G   ++ V NAL+ MY  CG + +A  +F+       D IS+
Sbjct: 198 GNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKK--DTISW 255

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV--------GYQVH 311
           N ++ G +      EA   F +ML+  LRP+ +T      AC+ P          G ++H
Sbjct: 256 NTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTM-----ACILPAAASLSSLERGREMH 309

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A A++ G+     V+NA + MY  CG +  A  +F  L  K+++SW  MI+ Y     GR
Sbjct: 310 AYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGR 369

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL---- 427
            AI  + +M+  GI+PD  +F ++L +     + +    + F N +    ++   L    
Sbjct: 370 DAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRD--EGWRFFNAMRNEHRIEPKLKHYA 427

Query: 428 --ISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +        +K+AY+    M   P + I W +L+ G  ++   V+  +  +E++  EL
Sbjct: 428 CMVDLLCHTGNLKEAYEFIETMPIEPDSSI-WVSLLRGCRIHR-NVKLAEKVAEMVF-EL 484

Query: 484 RPDEYTLSVALSS 496
            P+     V L++
Sbjct: 485 EPENTGYYVLLAN 497


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 217/682 (31%), Positives = 341/682 (50%), Gaps = 49/682 (7%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSVK-RVFSEIQNP-- 121
           A +++R    G+ LH +AL++G  ++  V+N++++ Y    R L+     VF++I     
Sbjct: 23  AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV SW + L+  ++              P   L  + +M++                   
Sbjct: 83  DVASWNSLLNPLSR------------HQPLAALSHFRSMMSSTDA--------------- 115

Query: 182 KLDVRRDNYSFASVLS----VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
              V    +SFA+V +    V  A            +  S  S  V V  AL+ MY   G
Sbjct: 116 ---VLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLG 172

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVS 296
            + DA +VF++      + +S+  M+ G A+    EEA   FR ML    L  +E    +
Sbjct: 173 AISDARRVFDQMPHR--NAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATA 230

Query: 297 VMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+SA   P    +G Q+H   +K G   + SV N+ +TMY+    +D A  +F   +E++
Sbjct: 231 VLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERN 290

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHA 410
            ++W+ MI+ YAQ      A   +L+M S G  P EFTF  +L +S   G + + +  H 
Sbjct: 291 SITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHG 350

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPV 469
            +   G    + V +AL+  YAK      A   FH +    +++ W  +I G + NG   
Sbjct: 351 LMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHE 410

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L  +S +    + P   T++  L +CA +++L  GKQ+H  +LK       S+G A+ 
Sbjct: 411 EALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALS 470

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           T+Y+KCG+L+ S+ VF  M ++D ISWN++IS ++QHG G++A+  F+ M+  G I PD 
Sbjct: 471 TMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEG-IAPDH 529

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF  VL ACSH GLVD G   F +M  DYG IP  DH +C++D+L RAG L EA+  I 
Sbjct: 530 ITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIE 589

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S  I   +  W  +  AC +  +  +G      L+E   +  S Y+LLSNIYAA   W +
Sbjct: 590 SITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWND 649

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
              +R L++  GV K PGCSW+
Sbjct: 650 VERVRHLMRLRGVSKDPGCSWV 671



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 214/442 (48%), Gaps = 29/442 (6%)

Query: 286 SLRPSELTFVSVM----SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK--I 339
           +LR S   F+  +    S+    R G  +H  A+KSG  ++T VSN+ IT Y S  +  +
Sbjct: 8   ALRMSHAQFIEHLRCAASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLL 67

Query: 340 DEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSL 395
             A  +FA +    +D+ SWN++++  + R+   +A+  +  M S    + P   +F ++
Sbjct: 68  GAAFAVFADIPAGLRDVASWNSLLNPLS-RHQPLAALSHFRSMMSSTDAVLPTPHSFAAV 126

Query: 396 LASSGFIEMVE---MIHAF---VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
             ++  +       + HAF   +  +    N+ VS AL++ Y K   I  A ++F  M  
Sbjct: 127 FTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPH 186

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQ 508
           RN ++W  +++G+       +  + F  +L    L  +E+  +  LS+ +    L  G Q
Sbjct: 187 RNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQ 246

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +HG VLK+ L+  +S+ N+++T+YAK   +D ++ VF    E+++I+W+A+I+ YAQ+GE
Sbjct: 247 LHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGE 306

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
              A + F  M   G   P + TF  +L+A S  G +  G +    MV   GF       
Sbjct: 307 ADCAATMFLQMHSAG-FSPTEFTFVGILNASSDMGALVVGKQAHGLMVK-LGFERQVYVK 364

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           S ++D+  + G   +A+   +  +       W A+ +     G+++ G     L+L    
Sbjct: 365 SALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMIT-----GHVQNGEHEEALMLYSRM 419

Query: 689 DK----PSVYVLLSNIYAAAGL 706
           DK    PS   + S + A A L
Sbjct: 420 DKEGVMPSYLTVTSVLRACACL 441



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 15/204 (7%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +++AL L+ ++     + P   ++++ L ACA L     G QLHA  L+ G     
Sbjct: 405 QNGEHEEALMLYSRM-DKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGG 463

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM--- 149
            V   + ++Y    +L     VF  + + D+ SW + +S  ++ G    A ++F++M   
Sbjct: 464 SVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLE 523

Query: 150 ---PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDAG 202
              PD     +  ++  C+  G  D G   FR M K   L  + D+Y+    +LS   AG
Sbjct: 524 GIAPDH--ITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILS--RAG 579

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVV 226
            L+  +     +T    +CL  +V
Sbjct: 580 QLKEAKDFIESITIDHGTCLWRIV 603


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  329 bits (843), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 287/534 (53%), Gaps = 10/534 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+ + K GF     + N LI MY  CG +  A +VF+       + +S+  +M
Sbjct: 20  LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER--NVVSWTALM 77

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRVGYQVHAQAMKSGFEAY 322
            G    G   E L  F +M  +   P+E T  + + AC    R G Q+H   +++GFE +
Sbjct: 78  VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH 137

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+N+ + MYS      +A  +F  +  +++ +WN+MIS YA    GR ++L + EMQ 
Sbjct: 138 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 197

Query: 383 V-GIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGI--ITNIQVSNALISAYAKNER 436
               +PDEFTF SLL A SG     E   +HA + + G+   +N  ++ AL+  Y K  R
Sbjct: 198 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHR 257

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A Q+F  +  RN I W T+I G    G   + +  F     S +R D + LS  ++ 
Sbjct: 258 LPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A  + +  GKQ+H Y  K      +S+ N+++ +Y KCG    + R F  M  ++ +SW
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 377

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            A+I+   +HG G+EA+  F+ MQ  G ++ D+  + A+LSACSH+GLVD+  R F  + 
Sbjct: 378 TAMINGVGKHGHGREAIDLFEEMQAEG-VEADEVAYLALLSACSHSGLVDECRRYFSRIC 436

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D    P  +H +CM+DLLGRAG L EA+ +I S  ++     W  L SAC  H ++ +G
Sbjct: 437 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 496

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           R +  +LL  + D P  YV+LSNI A AG W E   IR  ++R G+ KQ GCSW
Sbjct: 497 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSW 550



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 204/444 (45%), Gaps = 14/444 (3%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G +  A EVFD MP+R++  + A++ G   +G     + LF EM       + ++ +
Sbjct: 50  AKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLS 109

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           + L  C  G    G Q+H +  ++GF     V N+L+ MY       DA +VF+      
Sbjct: 110 ATLKACGGG-TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSR- 167

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CPRVGYQ 309
            +  ++N M+ G A  G+  ++L+ FR+M      +P E TF S++ AC      R G Q
Sbjct: 168 -NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQ 226

Query: 310 VHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           VHA     G    ++  ++ A + +Y  C ++  A  +F  L+ ++ + W T+I  +AQ 
Sbjct: 227 VHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQE 286

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVS 424
              + A+  +    S G+R D     S++   A    +E  + +H +        ++ V+
Sbjct: 287 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 346

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+L+  Y K     +A + F  M  RN+++W  +ING   +G   + +  F E+    + 
Sbjct: 347 NSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVE 406

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL-DCSL 542
            DE      LS+C+    +   ++    + ++  +   +   A M+ L  + G+L +   
Sbjct: 407 ADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 466

Query: 543 RVFNMMIEKDTISWNALISAYAQH 566
            + +M +E     W  L+SA   H
Sbjct: 467 LILSMPMEPTVGVWQTLLSACRVH 490



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 46/379 (12%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++ L LF ++  S    P+ ++LS TL AC     A  G Q+H   +R G + +  V
Sbjct: 84  GEARECLRLFGEMRGS-GTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDVV 140

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN+++ +Y   R     +RVF                               D +P R+L
Sbjct: 141 ANSLVVMYSKGRWTGDARRVF-------------------------------DVIPSRNL 169

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
             +N+MI+G    G     + +FREM +  D + D ++FAS+L  C   G    G Q+H+
Sbjct: 170 ATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHA 229

Query: 213 LVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            +   G S   + +   AL+ +Y  C  +  A +VF+  +    + I +  ++ G A  G
Sbjct: 230 AMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERR--NAIQWTTVIVGHAQEG 287

Query: 271 RVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
           +V+EA+  FR    + +R       + V+V +       G QVH    K+      SV+N
Sbjct: 288 QVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN 347

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + + MY  CG   EA   F  +  +++VSW  MI+   +   GR AI  + EMQ+ G+  
Sbjct: 348 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEA 407

Query: 388 DEFTFGSLLAS---SGFIE 403
           DE  + +LL++   SG ++
Sbjct: 408 DEVAYLALLSACSHSGLVD 426



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 153/355 (43%), Gaps = 49/355 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  ++  + +G  +D+L +F ++   H  +PD ++ ++ L AC+ L  A  G Q+H
Sbjct: 169 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVH 228

Query: 81  AYALRAGLKAYPH--VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           A     G+    +  +A  +L +Y     L    +VF  ++  +   WTT +    + G 
Sbjct: 229 AAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQ 288

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V  A                               + LFR      VR D +  +SV++V
Sbjct: 289 VKEA-------------------------------MCLFRRFWSSGVRADGHVLSSVVAV 317

Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             D  L+E G+Q+H    K+     VSV N+L+ MY  CG   +A + F E      + +
Sbjct: 318 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPAR--NVV 375

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQV 310
           S+  M++G+   G   EA+  F +M    +   E+ +++++SAC        C R   ++
Sbjct: 376 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 435

Query: 311 -HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMIST 363
              + M+   E Y  +    + +    G++ EA  +I +   E  +  W T++S 
Sbjct: 436 CQDRRMRPKAEHYACM----VDLLGRAGELREAKELILSMPMEPTVGVWQTLLSA 486



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + AR SSLR G Q+H  ++K    S   L N +I +YAKCG L  +  VF+ M E++ 
Sbjct: 11  LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 70

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW AL+  +  HGE +E +  F  M+  G   P++ T +A L AC   G    G +I  
Sbjct: 71  VSWTALMVGFLHHGEARECLRLFGEMRGSG-TSPNEFTLSATLKAC--GGGTRAGVQIHG 127

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
             V   GF   +   + ++ +  +  +  +A RV +   I +R+   W ++ S  A  G 
Sbjct: 128 VCVRT-GFEGHDVVANSLVVMYSKGRWTGDARRVFDV--IPSRNLATWNSMISGYAHAGQ 184

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW--EEAANIRELLKRTGV 722
            R   ++   +  R  ++P  +   S + A +GL    E A +   +   GV
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV 236


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 209/703 (29%), Positives = 345/703 (49%), Gaps = 90/703 (12%)

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS--WTTFLSACTKMGHVDYACEVF 146
           KA P++  + L+L +N ++     +    I  P + +  ++   S+C  +          
Sbjct: 3   KAAPNLCFSPLTLNQNRKENFFSSQNGCFIHKPSLKTKIFSPIFSSCIPIRISATPTRTI 62

Query: 147 D-KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
           D ++ D +  + +    G  EN  E I +    E+       +  ++ SVL +C AGL  
Sbjct: 63  DHQVTDYNAKILHFCQLGDLENAMELICMCQKSEL-------ETKTYGSVLQLC-AGLKS 114

Query: 206 F--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE---------------- 247
           F  G+++HS++  +      ++   L++ Y  CG++ +  +VF+                
Sbjct: 115 FTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSE 174

Query: 248 -----EAKGYVC----------------------------DHISYNVMMDGLASVGRVEE 274
                + K  +C                            D IS+N M+ G  S G  E 
Sbjct: 175 YAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTER 234

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            L  ++ M+   +     T +SV+  C       +G  VH+ A+KS FE   + SN  + 
Sbjct: 235 GLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLD 294

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS CG +D A  +F ++ E+++VSW +MI+ Y +      AI    +M+  G++ D   
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVA 354

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             S+L   A SG ++  + +H ++  N + +N+ V NAL+  YAK   ++ A  +F  M 
Sbjct: 355 ITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMV 414

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            ++II+WNT+I                      EL+PD  T++  L +CA +S+L  GK+
Sbjct: 415 VKDIISWNTMI---------------------GELKPDSRTMACVLPACASLSALERGKE 453

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           IHGY+L+N   S   + NA++ LY KCG L  +  +F+M+  KD +SW  +I+ Y  HG 
Sbjct: 454 IHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGY 513

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G EA++ F  M+D G I+PD+ +F ++L ACSH+GL++ G R F  M ND+   P  +H 
Sbjct: 514 GNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHY 572

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +CM+DLL R G L +A   + +  I   +  W AL   C  + ++ L   +A  + E E 
Sbjct: 573 ACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEP 632

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +    YVLL+NIYA A  WEE   +RE + + G+ K PGCSWI
Sbjct: 633 ENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWI 675



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 156/623 (25%), Positives = 286/623 (45%), Gaps = 63/623 (10%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI+AT    + T    +   N  + +  + G  ++A+ L      S +L+   Y   + L
Sbjct: 53  RISAT---PTRTIDHQVTDYNAKILHFCQLGDLENAMELICMCQKS-ELETKTYG--SVL 106

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
             CA L++   G ++H+      +     +   ++S Y    DL   +RVF  ++  +VY
Sbjct: 107 QLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVY 166

Query: 125 SWTTFLSACTKMGHV--------------------DYACEVFDKMPDRDLPVYNAMITGC 164
            W   +S   K+G                      + A E+FDK+ DRD+  +N+MI+G 
Sbjct: 167 LWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGY 226

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV 223
             NG  + G+G++++M  L +  D  +  SVL  C ++G L  G+ +HSL  KS F   +
Sbjct: 227 VSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI 286

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           +  N L+ MY  CG++  A +VFE+      + +S+  M+ G    GR + A+   + M 
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIKLLQQME 344

Query: 284 VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              ++   +   S++ AC        G  VH     +  E+   V NA + MY+ CG ++
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
            A  +F+ +  KDI+SWNTMI                       ++PD  T   +L   A
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACA 443

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           S   +E  + IH ++  NG  ++  V+NAL+  Y K   +  A  +F  +  +++++W  
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           +I G+ ++G+  + +  F+E+  + + PDE +    L +C+    L  G +   Y++KN 
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKND 562

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVS 574
            N+  K+     M+ L ++ G+L  +      + I  D   W AL+     + + + A  
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAE- 621

Query: 575 CFKAMQDVGRIKPDQATFTAVLS 597
             K  + V  ++P+   +  +L+
Sbjct: 622 --KVAERVFELEPENTGYYVLLA 642


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 189/604 (31%), Positives = 319/604 (52%), Gaps = 12/604 (1%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFAS 194
           G++  A +VFDKMP  D+  + ++I         D  + LF  M  +D  V  D    + 
Sbjct: 54  GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C  +  + +G  LH+   K+     V V ++L+ MY   G +  +C+VF E     
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP--F 171

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + +++  ++ GL   GR +E L  F +M  +       TF   + AC   R    G  +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +  GF     V+N+  TMY+ CG++ +   +F  + E+D+VSW ++I  Y +    
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A+  +++M++  + P+E TF S+ ++   +  +   E +H  V   G+  ++ VSN++
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+    +  A  +F  M  R+II+W+T+I G+   GF  +G ++FS +  S  +P +
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           + L+  LS    ++ +  G+Q+H   L   L    ++ +++I +Y+KCG +  +  +F  
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
               D +S  A+I+ YA+HG+ KEA+  F+    VG  +PD  TF +VL+AC+H+G +D 
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDSVTFISVLTACTHSGQLDL 530

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ M   Y   PA++H  CM+DLL RAG L +AE++IN    +     W  L  AC
Sbjct: 531 GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
            A G++  GR  A  +LE +    +  V L+NIY++ G  EEAAN+R+ +K  GVIK+PG
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650

Query: 728 CSWI 731
            S I
Sbjct: 651 WSSI 654



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 163/570 (28%), Positives = 268/570 (47%), Gaps = 48/570 (8%)

Query: 39  DALHLFVQIHS-SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           +AL LF  +    H + PD   LS  L AC    N A+G  LHAYA++  L +  +V ++
Sbjct: 89  EALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSS 148

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L +YK                               ++G +D +C VF +MP R+   +
Sbjct: 149 LLDMYK-------------------------------RVGKIDKSCRVFSEMPFRNAVTW 177

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVT 215
            A+ITG    G    G+  F EM + +   D Y+FA  L  C AGL  +++G+ +H+ V 
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC-AGLRQVKYGKAIHTHVI 236

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
             GF   + V N+L TMY  CG + D   +FE       D +S+  ++     +G+  +A
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER--DVVSWTSLIVAYKRIGQEVKA 294

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F  M  + + P+E TF S+ SAC    R+  G Q+H   +  G     SVSN+ + M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS+CG +  A ++F  ++ +DI+SW+T+I  Y Q   G      +  M+  G +P +F  
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414

Query: 393 GSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            SLL+ SG + ++E    +HA     G+  N  V ++LI+ Y+K   IK+A  IF     
Sbjct: 415 ASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR 474

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            +I++   +ING+  +G   + +  F + L    RPD  T    L++C     L  G   
Sbjct: 475 DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHY 534

Query: 510 HGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHG 567
              + +  N+         M+ L  + G L  + ++ N M  +KD + W  L+ A    G
Sbjct: 535 FNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKG 594

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           + +      +A + +  + P  AT    L+
Sbjct: 595 DIERGR---RAAERILELDPTCATALVTLA 621



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 222/490 (45%), Gaps = 60/490 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L  +G Y++ L  F ++  S +L  D Y+ +  L ACA LR   +G  +H + +  G
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VAN++ ++Y    ++     +F  +   DV SWT+ + A  ++G    A E F 
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           KM +  +P                                +  +FAS+ S C +   L +
Sbjct: 300 KMRNSQVP-------------------------------PNEQTFASMFSACASLSRLVW 328

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDG 265
           G QLH  V   G +  +SV N+++ MY  CGN+V A  +F+   G  C D IS++ ++ G
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ---GMRCRDIISWSTIIGG 385

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
               G  EE    F  M  +  +P++    S++S      V   G QVHA A+  G E  
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           ++V ++ I MYS CG I EA MIF      DIVS   MI+ YA+    + AI  + +   
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505

Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAK 433
           VG RPD  TF S+L +   SG +++      F + N +     +  A      ++    +
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDL-----GFHYFNMMQETYNMRPAKEHYGCMVDLLCR 560

Query: 434 NERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
             R+  A ++ + MS  ++ + W TL+      G   +G +    +L  EL P   T + 
Sbjct: 561 AGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL--ELDP---TCAT 615

Query: 493 ALSSCARISS 502
           AL + A I S
Sbjct: 616 ALVTLANIYS 625


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  329 bits (843), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 190/534 (35%), Positives = 287/534 (53%), Gaps = 10/534 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH+ + K GF     + N LI MY  CG +  A +VF+       + +S+  +M
Sbjct: 216 LRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPER--NVVSWTALM 273

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRVGYQVHAQAMKSGFEAY 322
            G    G   E L  F +M  +   P+E T  + + AC    R G Q+H   +++GFE +
Sbjct: 274 VGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQIHGVCVRTGFEGH 333

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+N+ + MYS      +A  +F  +  +++ +WN+MIS YA    GR ++L + EMQ 
Sbjct: 334 DVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQR 393

Query: 383 V-GIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGI--ITNIQVSNALISAYAKNER 436
               +PDEFTF SLL A SG     E   +HA + + G+   +N  ++ AL+  Y K  R
Sbjct: 394 RHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHR 453

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A Q+F  +  RN I W T+I G    G   + +  F     S +R D + LS  ++ 
Sbjct: 454 LPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAV 513

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A  + +  GKQ+H Y  K      +S+ N+++ +Y KCG    + R F  M  ++ +SW
Sbjct: 514 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSW 573

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            A+I+   +HG G+EA+  F+ MQ  G ++ D+  + A+LSACSH+GLVD+  R F  + 
Sbjct: 574 TAMINGVGKHGHGREAIDLFEEMQAEG-VEADEVAYLALLSACSHSGLVDECRRYFSRIC 632

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D    P  +H +CM+DLLGRAG L EA+ +I S  ++     W  L SAC  H ++ +G
Sbjct: 633 QDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVG 692

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           R +  +LL  + D P  YV+LSNI A AG W E   IR  ++R G+ KQ GCSW
Sbjct: 693 REVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLRKQGGCSW 746



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 204/443 (46%), Gaps = 14/443 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +  A EVFD MP+R++  + A++ G   +G     + LF EM       + ++ ++
Sbjct: 247 KCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSA 306

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            L  C  G    G Q+H +  ++GF     V N+L+ MY       DA +VF+       
Sbjct: 307 TLKACGGG-TRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSR-- 363

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL---CPRVGYQV 310
           +  ++N M+ G A  G+  ++L+ FR+M      +P E TF S++ AC      R G QV
Sbjct: 364 NLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQV 423

Query: 311 HAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           HA     G    ++  ++ A + +Y  C ++  A  +F  L+ ++ + W T+I  +AQ  
Sbjct: 424 HAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEG 483

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
             + A+  +    S G+R D     S++   A    +E  + +H +        ++ V+N
Sbjct: 484 QVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN 543

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +L+  Y K     +A + F  M  RN+++W  +ING   +G   + +  F E+    +  
Sbjct: 544 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEA 603

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL-DCSLR 543
           DE      LS+C+    +   ++    + ++  +   +   A M+ L  + G+L +    
Sbjct: 604 DEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKEL 663

Query: 544 VFNMMIEKDTISWNALISAYAQH 566
           + +M +E     W  L+SA   H
Sbjct: 664 ILSMPMEPTVGVWQTLLSACRVH 686



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 175/379 (46%), Gaps = 46/379 (12%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G  ++ L LF ++  S    P+ ++LS TL AC     A  G Q+H   +R G + +  V
Sbjct: 280 GEARECLRLFGEMRGS-GTSPNEFTLSATLKACGGGTRA--GVQIHGVCVRTGFEGHDVV 336

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN+++ +Y   R     +RVF                               D +P R+L
Sbjct: 337 ANSLVVMYSKGRWTGDARRVF-------------------------------DVIPSRNL 365

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
             +N+MI+G    G     + +FREM +  D + D ++FAS+L  C   G    G Q+H+
Sbjct: 366 ATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHA 425

Query: 213 LVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            +   G S   + +   AL+ +Y  C  +  A +VF+  +    + I +  ++ G A  G
Sbjct: 426 AMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERR--NAIQWTTVIVGHAQEG 483

Query: 271 RVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
           +V+EA+  FR    + +R       + V+V +       G QVH    K+      SV+N
Sbjct: 484 QVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN 543

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + + MY  CG   EA   F  +  +++VSW  MI+   +   GR AI  + EMQ+ G+  
Sbjct: 544 SLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEA 603

Query: 388 DEFTFGSLLAS---SGFIE 403
           DE  + +LL++   SG ++
Sbjct: 604 DEVAYLALLSACSHSGLVD 622



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 153/354 (43%), Gaps = 49/354 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  ++  + +G  +D+L +F ++   H  +PD ++ ++ L AC+ L  A  G Q+H
Sbjct: 365 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVH 424

Query: 81  AYALRAGLKAYPH--VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           A     G+    +  +A  +L +Y     L    +VF  ++  +   WTT +    + G 
Sbjct: 425 AAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQ 484

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V  A                               + LFR      VR D +  +SV++V
Sbjct: 485 VKEA-------------------------------MCLFRRFWSSGVRADGHVLSSVVAV 513

Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
             D  L+E G+Q+H    K+     VSV N+L+ MY  CG   +A + F E      + +
Sbjct: 514 FADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPAR--NVV 571

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQV 310
           S+  M++G+   G   EA+  F +M    +   E+ +++++SAC        C R   ++
Sbjct: 572 SWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRI 631

Query: 311 -HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMIS 362
              + M+   E Y  +    + +    G++ EA  +I +   E  +  W T++S
Sbjct: 632 CQDRRMRPKAEHYACM----VDLLGRAGELREAKELILSMPMEPTVGVWQTLLS 681



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 9/232 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + AR SSLR G Q+H  ++K    S   L N +I +YAKCG L  +  VF+ M E++ 
Sbjct: 207 LRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNV 266

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW AL+  +  HGE +E +  F  M+  G   P++ T +A L AC   G    G +I  
Sbjct: 267 VSWTALMVGFLHHGEARECLRLFGEMRGSG-TSPNEFTLSATLKAC--GGGTRAGVQIHG 323

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
             V   GF   +   + ++ +  +  +  +A RV +   I +R+   W ++ S  A  G 
Sbjct: 324 VCVRT-GFEGHDVVANSLVVMYSKGRWTGDARRVFDV--IPSRNLATWNSMISGYAHAGQ 380

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW--EEAANIRELLKRTGV 722
            R   ++   +  R  ++P  +   S + A +GL    E A +   +   GV
Sbjct: 381 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV 432


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 199/604 (32%), Positives = 316/604 (52%), Gaps = 23/604 (3%)

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
           FD +  R+L  +  ++     +G     +     M +  VR D  +F + L  C D   L
Sbjct: 15  FDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESL 74

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G ++H +V  S       V NAL+ MY  CG++  A +VF + +    + IS+++M  
Sbjct: 75  RDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME-RTRNVISWSIMAG 133

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
             A  G V EAL  FR ML+  ++ ++   V+++SAC  P +   G  +H+    SGFE+
Sbjct: 134 AHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFES 193

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYLE 379
              V+NA +TMY  CG ++EA  +F  + E  +D+VSWN M+STY   + G+ AI  Y  
Sbjct: 194 ELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQR 253

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ   +RPD+ T+ SLL++    E V    ++H  +  + +  N+ V NAL+S YAK   
Sbjct: 254 MQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGS 310

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-------LRPDEYT 489
             +A  +F  M  R+II+W T+I+ ++      +    F ++L  E       ++PD   
Sbjct: 311 HTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALA 370

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               L++CA +S+L  GK +        L S  ++G A++ LY KCG+++ + R+F+ + 
Sbjct: 371 FVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVC 430

Query: 550 EKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            +  +  WNA+I+ YAQ G+  EA+  F  M+  G ++PD  +F ++L ACSH GL D G
Sbjct: 431 SRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG-VRPDSFSFVSILLACSHTGLEDQG 489

Query: 609 TRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
              F SM  +Y  +     H  C+ DLLGR G L EAE  +    ++  +  W +L +AC
Sbjct: 490 KSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAAC 549

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H +L+  + +A  LL  E    + YV LSNIYA    W   A +R+ +   GV K+ G
Sbjct: 550 RNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERG 609

Query: 728 CSWI 731
            S I
Sbjct: 610 VSTI 613



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 149/589 (25%), Positives = 274/589 (46%), Gaps = 57/589 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  + SG  ++ L    ++     ++PD  +  T L +C +  +   G ++H   + + 
Sbjct: 30  VAAFAISGQSKETLRALERMRQD-GVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSR 88

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP-DVYSWTTFLSACTKMGHVDYACEVF 146
           L+  P V+N +L++YK    L   KRVF++++   +V SW+    A    G+V  A    
Sbjct: 89  LEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEA---- 144

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLE 205
                                      +  FR M  L ++    +  ++LS C +  L++
Sbjct: 145 ---------------------------LRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 177

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +HS +  SGF   + V NA++TMY  CG V +A KVF+     + D +S+N+M+  
Sbjct: 178 DGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLST 237

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY 322
                R ++A+  ++ M    LRP ++T+VS++SAC       +G  +H Q +    E  
Sbjct: 238 YVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKN 294

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY---LE 379
             V NA ++MY+ CG   EA  +F +++++ I+SW T+IS Y +R L   A   +   LE
Sbjct: 295 VIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLE 354

Query: 380 MQSVG----IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           ++  G    ++PD   F ++L   A    +E  +M+       G+ ++  V  A+++ Y 
Sbjct: 355 LEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYG 414

Query: 433 KNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           K   I++A +IF  +  R ++  WN +I  +   G   + L+ F  + M  +RPD ++  
Sbjct: 415 KCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFV 474

Query: 492 VALSSCARISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
             L +C+       GK     +     N+   +     +  L  + G L  +      + 
Sbjct: 475 SILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLP 534

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ D ++W +L++A   H + K A    +    + R++P  AT    LS
Sbjct: 535 VKPDAVAWTSLLAACRNHRDLKRAK---EVANKLLRLEPRCATGYVALS 580



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 162/293 (55%), Gaps = 10/293 (3%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ C    +A   F  L+++++ SW  +++ +A     +  + A   M+  G+RPD  T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           F + L S G  E +     IH  V  + +  + +VSNAL++ Y K   +  A ++F  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 449 -PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             RN+I+W+ +     L+G   + L+HF  +L+  ++  +  +   LS+C+  + ++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQ 565
            IH  +  +   S++ + NA++T+Y +CG ++ + +VF+ M E  +D +SWN ++S Y  
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +  GK+A+  ++ MQ    ++PD+ T+ ++LSACS A  V  G  +   +VND
Sbjct: 241 NDRGKDAIQLYQRMQ----LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVND 289



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 153/328 (46%), Gaps = 37/328 (11%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YA  +    A   F  +  RN+ +W  L+  F ++G   + L+    +    +RPD  T 
Sbjct: 2   YAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTF 61

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMI 549
             AL SC    SLR G +IH  V+ + L     + NA++ +Y KCG L  + RVF  M  
Sbjct: 62  ITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER 121

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++ ISW+ +  A+A HG   EA+  F+ M  +G IK  ++    +LSACS   LV DG 
Sbjct: 122 TRNVISWSIMAGAHALHGNVWEALRHFRFMLLLG-IKATKSAMVTILSACSSPALVQDG- 179

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS------------------- 650
           R+  S +   GF       + ++ + GR G ++EA +V ++                   
Sbjct: 180 RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYV 239

Query: 651 ------------QHIQARSDN--WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV- 695
                       Q +Q R D   + +L SAC++  ++ LGR++   ++  E +K  +   
Sbjct: 240 HNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 299

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVI 723
            L ++YA  G   EA  + + +++  +I
Sbjct: 300 ALVSMYAKCGSHTEARAVFDKMEQRSII 327


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 218/693 (31%), Positives = 335/693 (48%), Gaps = 45/693 (6%)

Query: 48  HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           HS   L      L   L ACA L +      LHA  L  GL         +LS Y    D
Sbjct: 14  HSVEHLPHGGALLHRLLPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGD 70

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMG-HVDYACEVFDKMPDRDLPVYNAMITGCTE 166
           L S +RV  E   PD Y++   L      G H D             L ++  M   C E
Sbjct: 71  LASARRVLDETPRPDPYTYRVALGWHAAAGRHADA------------LALHRGMRRRCPE 118

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVV 226
             ++D  + L     K  VR  ++               +GR+LH    K+G +    V+
Sbjct: 119 -AHDD--VVLLSLALKASVRSADF--------------RYGRRLHCNAVKAGGADGF-VM 160

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           N L+ MY   G++ +A KVF+   G   + +S+  M+ G    G  EE L  F +M    
Sbjct: 161 NCLVDMYAKAGDLENARKVFDRILGR--NVVSWTSMLSGCLQNGFAEEGLALFNEMREER 218

Query: 287 LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           + PSE T  SV+ AC        G  VH   +K G      ++ A + MY  CG++++A 
Sbjct: 219 VLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDAR 278

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F  L   D+V W TMI  Y Q      A+L + + + V I P+  T  ++L++S  + 
Sbjct: 279 RLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLR 338

Query: 404 ---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
              +  +IHA      +I N  V NAL+  YAK + + +A  IF  +S ++++TWN+LI 
Sbjct: 339 NLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIA 398

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G++ N    + L  FS++ +    PD  ++  ALS+C  +  L  GK  H Y +K   +S
Sbjct: 399 GYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLS 458

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF-KAM 579
            + +  A++ LY KC DL  + RVF+ M E+++++W A+I  Y   G+   ++    K +
Sbjct: 459 NVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKML 518

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +D   I+P++  FT++LS CSH G+V  G   FDSM   +   P+  H +CM+D+L RAG
Sbjct: 519 KD--NIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAG 576

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
            L+EA   I    + A    W A    C  H  L  G      ++    DKP  YVL+SN
Sbjct: 577 NLEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSN 636

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
           +Y + G W+++  IR L++  G++K PGCS +G
Sbjct: 637 LYTSYGRWDKSLAIRRLMQERGLVKLPGCSSVG 669



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 273/585 (46%), Gaps = 53/585 (9%)

Query: 26  ISLANLSRSGHYQDALHLFVQIHSS-HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           ++L   + +G + DAL L   +     +   D+  LS  L A     +  +G +LH  A+
Sbjct: 91  VALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAV 150

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +AG  A   V N ++ +Y  A DL + ++VF  I   +V SWT+ LS C           
Sbjct: 151 KAG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGC----------- 198

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                +NG+ + G+ LF EM +  V    Y+ ASVL  C   G 
Sbjct: 199 --------------------LQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGS 238

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR +H  V K G      +  A++ MY  CG V DA ++F+E  G+V D + +  M+
Sbjct: 239 LHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDEL-GFV-DLVLWTTMI 296

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G    G   +AL+ F D     + P+ +T  +V+SA    R   +G  +HA ++K    
Sbjct: 297 VGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVI 356

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V NA + MY+ C  + EA  IF R+  KD+V+WN++I+ Y + ++G  A++ + +M
Sbjct: 357 ENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQM 416

Query: 381 QSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G  PD  +  + L++    G + + +  H +      ++N+ V+ AL++ Y K   +
Sbjct: 417 RVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADL 476

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F  MS RN +TW  +I G+ + G     +   +++L   ++P+E   +  LS+C
Sbjct: 477 PSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTC 536

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           +    +  GK     + +  N+   M     M+ + A+ G+L+ +L     M     IS 
Sbjct: 537 SHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISI 596

Query: 556 WNALISAYAQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           W A +     H     G+EA++    +       PD+  F  ++S
Sbjct: 597 WGAFLHGCKLHSRLEFGEEAINRMMVLH------PDKPDFYVLMS 635


>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
 gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
          Length = 833

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 215/703 (30%), Positives = 346/703 (49%), Gaps = 53/703 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N ++A  + SG Y   L L   +     + PD  +  + L AC   R+ + G  +H
Sbjct: 166 LISWNNAIAANAESGDYTFTLALLKSMQL-EGMAPDKVTFVSALNACIGSRSLSNGRLIH 224

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  L  G++                                DV   T  ++   + G ++
Sbjct: 225 ALVLERGMEG-------------------------------DVVLGTALVTMYGRCGCLE 253

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVL-SV 198
            A E+F +MP+R++  +NAM+  CT N +    I LF+ M  +  V     SF +VL +V
Sbjct: 254 SAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAV 313

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                L  GR++H+++ +      + V NAL+TMY  CG V DA +VF   +    D +S
Sbjct: 314 TTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERR--DLVS 371

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAM 315
           +N M+   A  G   E +  F  M    + P  +TF+  + AC   R    G  VH  ++
Sbjct: 372 WNAMISAYAQSGLAREVVNLFHRMRAERVPPDRITFLMALDACAEIRDLDSGRTVHHLSV 431

Query: 316 KSGFEAYTSVSNAAITMYSSCGK--------IDEACMIFARLQEKDIVSWNTMISTYAQR 367
           +SGF +  SV+NA + +YSSC          ++    IF  +  +D++SWNTMI+ Y Q 
Sbjct: 432 ESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQA 491

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVF--INGIITNIQ 422
               SA+  +  M   GIR ++ TF SLL+   S  F+   E IH  V      + ++  
Sbjct: 492 GDSFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPI 551

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+ A+++ Y K   +  A  +F + S RN+ +WN++I+ + L+G   Q       +    
Sbjct: 552 VAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREG 611

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + PD  T    L++C    ++RHGK IH  ++ + L     + NA++  Y+KCG+LD + 
Sbjct: 612 VLPDRVTFITLLNACVAGGAVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTAT 671

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F  +  +D +SWN +I+ +A +G  +EA+     MQ  G ++PD  TF  +LSA SHA
Sbjct: 672 SLFGALDYRDVVSWNGIIAGFAHNGHAREALKSMWLMQQDG-VRPDAITFLTILSASSHA 730

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           G +  G   F SM  D+      +H  CM+DLLGRAG + +AE  +++   + +  +W  
Sbjct: 731 GFLRQGGDDFVSMAVDHELERGVEHYGCMIDLLGRAGRIGDAEYFVSAMRDEDKEVSWMT 790

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           L SAC  HG+    + +AG ++E      S YV LSN+YA  G
Sbjct: 791 LLSACEVHGDEERAKRVAGSIVEMNPQHSSAYVALSNLYATCG 833



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 188/695 (27%), Positives = 330/695 (47%), Gaps = 63/695 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY--ALRAGLK 89
           +++GH + AL LF ++  S  L P+  +    L AC +      G Q+HA   AL+  L+
Sbjct: 75  AQTGHQRQALDLFTEMAGS-SLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQL-LE 132

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           +   VAN ++ +Y+                               K    D A  VF +M
Sbjct: 133 SDVPVANAVMGMYR-------------------------------KCERADLAMAVFSEM 161

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
            +RDL  +N  I    E+G     + L + M    +  D  +F S L+ C  +  L  GR
Sbjct: 162 RERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGR 221

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H+LV + G    V +  AL+TMY  CG +  A ++F        + +S+N M+     
Sbjct: 222 LIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPER--NVVSWNAMVASCTL 279

Query: 269 VGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTS 324
                EA+  F+ M+ VA + P+ ++F++V++A   P     G ++HA   +    +   
Sbjct: 280 NAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIE 339

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V+NA +TMY  CG + +A  +F+ ++ +D+VSWN MIS YAQ  L R  +  +  M++  
Sbjct: 340 VANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAER 399

Query: 385 IRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNER--- 436
           + PD  TF  L+A     E+ ++     +H     +G  + I V+NA +  Y+       
Sbjct: 400 VPPDRITF--LMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSS 457

Query: 437 -----IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
                ++    IF +M+ R++I+WNT+I G++  G     L  F  +L+  +R ++ T  
Sbjct: 458 SSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGIRGNQVTFM 517

Query: 492 VALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
             LS C   + LR G+ IH  V+     L S   +  A++ +Y KCG+LD +  +F    
Sbjct: 518 SLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTS 577

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++  SWN++ISAYA HG  ++A    + M+  G + PD+ TF  +L+AC   G V  G 
Sbjct: 578 HRNLASWNSMISAYALHGRAEQAFDLSERMRREG-VLPDRVTFITLLNACVAGGAVRHGK 636

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            I   ++ D G        + +++   + G LD A  +  +   +    +W  + +  A 
Sbjct: 637 MIHARII-DSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVV-SWNGIIAGFAH 694

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           +G+ R   + +  L++++  +P     L+ + A++
Sbjct: 695 NGHAREA-LKSMWLMQQDGVRPDAITFLTILSASS 728



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/552 (28%), Positives = 279/552 (50%), Gaps = 24/552 (4%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +D A +VFD+M +RD+  + AMI+   + G++   + LF EM    +  +  +F ++L  
Sbjct: 49  LDEARKVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEA 108

Query: 199 CDAG-LLEFGRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           CD+   LE G+Q+H+ V+        V V NA++ MY  C     A  VF E +    D 
Sbjct: 109 CDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRER--DL 166

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           IS+N  +   A  G     L   + M +  + P ++TFVS ++AC+  R    G  +HA 
Sbjct: 167 ISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHAL 226

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ G E    +  A +TMY  CG ++ A  IF R+ E+++VSWN M+++         A
Sbjct: 227 VLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEA 286

Query: 374 ILAYLEMQSVG-IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALIS 429
           I  +  M +V  + P   +F ++L +    E +     IHA +    +++ I+V+NAL++
Sbjct: 287 IELFKRMVAVAMVEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVT 346

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y +   +  A ++F  M  R++++WN +I+ +  +G   + +  F  +    + PD  T
Sbjct: 347 MYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRAERVPPDRIT 406

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD--------LDCS 541
             +AL +CA I  L  G+ +H   +++   S +S+ NA + LY+ C          ++  
Sbjct: 407 FLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSSSSSSLMEVV 466

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             +F  M  +D ISWN +I+ Y Q G+   A+S FK M   G I+ +Q TF ++LS C  
Sbjct: 467 AGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEG-IRGNQVTFMSLLSVCDS 525

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVI-NSQHIQARSDN 659
              +  G  I   ++N    + ++  + + ++++ G+ G LD A  +  ++ H    S  
Sbjct: 526 RAFLRQGETIHRRVINQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLAS-- 583

Query: 660 WWALFSACAAHG 671
           W ++ SA A HG
Sbjct: 584 WNSMISAYALHG 595



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 230/429 (53%), Gaps = 12/429 (2%)

Query: 192 FASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +A ++  C  +G LE GR++H  V +      +   N L+ MY  C ++ +A KVF+  +
Sbjct: 1   YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---G 307
               D +S+  M+   A  G   +AL  F +M  +SL P+ +TF++++ AC  P     G
Sbjct: 61  ER--DVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDG 118

Query: 308 YQVHAQAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
            Q+HA+       E+   V+NA + MY  C + D A  +F+ ++E+D++SWN  I+  A+
Sbjct: 119 KQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAE 178

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQV 423
                  +     MQ  G+ PD+ TF S L +   S  +    +IHA V   G+  ++ +
Sbjct: 179 SGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVL 238

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSE 482
             AL++ Y +   ++ A +IFH M  RN+++WN ++    LN    + ++ F  ++ ++ 
Sbjct: 239 GTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAM 298

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + P   +    L++     +L  G++IH  + +  L+S++ + NA++T+Y +CG +  + 
Sbjct: 299 VEPTRVSFITVLNAVTTPEALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAE 358

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           RVF+ M  +D +SWNA+ISAYAQ G  +E V+ F  M+   R+ PD+ TF   L AC+  
Sbjct: 359 RVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMR-AERVPPDRITFLMALDACAEI 417

Query: 603 GLVDDGTRI 611
             +D G  +
Sbjct: 418 RDLDSGRTV 426



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 196/374 (52%), Gaps = 10/374 (2%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G +VH    +   +      N  + MY  C  +DEA  +F R++E+D+VSW  MIS YAQ
Sbjct: 17  GRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAMISAYAQ 76

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFV-FINGIITNIQ 422
               R A+  + EM    + P+  TF +LL    S  F+E  + IHA V  +  + +++ 
Sbjct: 77  TGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVP 136

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+NA++  Y K ER   A  +F  M  R++I+WN  I     +G     L     + +  
Sbjct: 137 VANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEG 196

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + PD+ T   AL++C    SL +G+ IH  VL+  +   + LG A++T+Y +CG L+ + 
Sbjct: 197 MAPDKVTFVSALNACIGSRSLSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAR 256

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+ M E++ +SWNA++++   +    EA+  FK M  V  ++P + +F  VL+A +  
Sbjct: 257 EIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTP 316

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NW 660
             + +G RI  +M+ +   +   +  + ++ + GR G + +AERV ++     R D  +W
Sbjct: 317 EALAEGRRIH-AMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAME---RRDLVSW 372

Query: 661 WALFSACAAHGNLR 674
            A+ SA A  G  R
Sbjct: 373 NAMISAYAQSGLAR 386



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           SG +E    +H  V  +    ++   N L++ Y +   + +A ++F  M  R++++W  +
Sbjct: 11  SGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMRERDVVSWTAM 70

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+ +   G   Q L  F+E+  S L P+  T    L +C     L  GKQIH  V    L
Sbjct: 71  ISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQL 130

Query: 519 I-SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + S + + NA++ +Y KC   D ++ VF+ M E+D ISWN  I+A A+ G+    ++  K
Sbjct: 131 LESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAIAANAESGDYTFTLALLK 190

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
           +MQ  G + PD+ TF + L+AC  +  + +G R+  ++V + G        + ++ + GR
Sbjct: 191 SMQLEG-MAPDKVTFVSALNACIGSRSLSNG-RLIHALVLERGMEGDVVLGTALVTMYGR 248

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSAC 667
            G L+ A R I  +  +    +W A+ ++C
Sbjct: 249 CGCLESA-REIFHRMPERNVVSWNAMVASC 277


>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 628

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 196/592 (33%), Positives = 320/592 (54%), Gaps = 13/592 (2%)

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
           P  D    N+ I   T+     + + L  ++ +       +    ++S C  +G +  G 
Sbjct: 40  PGNDFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGI 99

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           QLHS + K GF   V + +AL+ MY  CG V  A ++F+E      + +++N ++ G   
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHR--NVVTWNSLISGYLH 157

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSV 325
           VG  E A+  F +M+   + P+  +  +V+  C      ++G QVH  +MK GF     V
Sbjct: 158 VGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVV 217

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
               I +YS    ID + ++F  + E++I++W +M++ YA      +A++   +MQ +GI
Sbjct: 218 GTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGI 277

Query: 386 RPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK--NERIKQA 440
           R +  T+  LL+S   S  ++  + +H  +   G+ +N  +   L++ Y++  +  ++  
Sbjct: 278 RLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECSSSSLEDF 337

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++   ++  + I+WN +I G    G     L+ FS++  + +  D +T +  L +   I
Sbjct: 338 NKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMI 397

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S+L  GKQIH  VLK    S +++ N ++++YA+CG ++ + RVF++M   D ISWN+L+
Sbjct: 398 STLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLL 457

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S  A HG G+EAV  F+ M+  G +KPD  TF  VLSAC H GL+D G   FD M NDY 
Sbjct: 458 SGCAYHGYGREAVELFEQMRRSG-VKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYS 516

Query: 621 F-IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
              P  +H S M+DL  RAGYL EAE  IN+  I+     + AL SAC  HGN+ +    
Sbjct: 517 LESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRC 576

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  LL+   + P +YVLLSN+ A  G W+  A+IR+++   GV K+PG SWI
Sbjct: 577 AKKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 142/560 (25%), Positives = 260/560 (46%), Gaps = 64/560 (11%)

Query: 41  LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
           L L  Q+   H   P  + L+  +++CA   +   G QLH+  ++ G  +  ++ + ++ 
Sbjct: 64  LKLLAQLQQ-HGSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVD 122

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           +Y     + S +R+F E+ + +V +W                               N++
Sbjct: 123 MYGKCGAVSSAQRLFDEMPHRNVVTW-------------------------------NSL 151

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF 219
           I+G    G  +I I LF EM K+ +    +S ++VL  C      + G Q+H L  K GF
Sbjct: 152 ISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGF 211

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              + V   LI +Y    N +DA ++  +      + I++  M+ G A   +   A++  
Sbjct: 212 CYNIVVGTCLIDLYSKGWN-IDASRLMFDLMPER-NIITWTSMVAGYAHCQQPVAAMVLV 269

Query: 280 RDMLVASLRPSELTFVSVMSA---------CLCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           RDM    +R + +T+  ++S+         C       QVH + ++ G E+ + +    +
Sbjct: 270 RDMQRLGIRLNYVTYNCLLSSFSSSNDLDHC------KQVHCRIIREGLESNSYLEVTLV 323

Query: 331 TMYSSC--GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           T+YS C    +++   + + +   D +SWN +I   +    G +A+  + +M+  GI  D
Sbjct: 324 TVYSECSSSSLEDFNKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMD 383

Query: 389 EFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            FTF S+L + G I  ++    IHA V   G  +N+ V N L+S YA+   I  A ++F 
Sbjct: 384 LFTFTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFS 443

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M   ++I+WN+L++G   +G+  + ++ F ++  S ++PD  T  V LS+C  +  L  
Sbjct: 444 LMDRHDVISWNSLLSGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDK 503

Query: 506 GKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNAL 559
           G +      + Y L++      S   +M+ L+++ G L  +    N M IE     + AL
Sbjct: 504 GLEYFDLMRNDYSLESPTTEHYS---SMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKAL 560

Query: 560 ISAYAQHGEGKEAVSCFKAM 579
           +SA   HG  + AV C K +
Sbjct: 561 LSACQVHGNVEIAVRCAKKL 580



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 15/179 (8%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +  LS  G+ + AL  F ++  +  +  D+++ ++ L A   +     G Q+HA
Sbjct: 350 ISWNAVIGGLSNLGNGEAALKCFSKMRQA-GIDMDLFTFTSVLRAIGMISTLDEGKQIHA 408

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
             L+AG  +  +V N ++S+Y     +   KRVFS +   DV SW + LS C   G+   
Sbjct: 409 LVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLSGCAYHGYGRE 468

Query: 142 ACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           A E+F++M      PD     +  +++ C   G  D G+  F      D+ R++YS  S
Sbjct: 469 AVELFEQMRRSGVKPDN--TTFLVVLSACRHVGLLDKGLEYF------DLMRNDYSLES 519


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 205/641 (31%), Positives = 339/641 (52%), Gaps = 20/641 (3%)

Query: 103 KNARDLVSVKRVFSEIQ---NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           +  +DL SV+++   I    + +V+     + A  K G V  A   FD +  ++   + +
Sbjct: 35  RQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGS 94

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS- 217
           M+T   +NG+    + L++ M   D++ +   + +VL  C +   LE G+ +HS ++ + 
Sbjct: 95  MLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTK 151

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G    V + N+L+TMY  CG++ DA ++FE   G      S+N M+   A  G  EEA+ 
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVS-SWNAMIAAYAQSGHFEEAIR 210

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            + DM V    PS  TF SV+SAC    +   G ++HA     G E   S+ NA +TMY+
Sbjct: 211 LYEDMDV---EPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYA 267

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C  +D+A  IF RL  +D+VSW+ MI+ +A+ +L   AI  Y +MQ  G+RP+ +TF S
Sbjct: 268 RCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFAS 327

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   AS G +     +H  +  NG    +    AL+  Y     + +A  +F  +  R+
Sbjct: 328 VLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRD 387

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DEYTLSVALSSCARISSLRHGKQIH 510
              W  LI G+   G     L+ + E+  +   P  +   S  +S+CA + +    +Q H
Sbjct: 388 EGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAH 447

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             +  + +IS   L  +++ +Y++ G+L+ + +VF+ M  +DT++W  LI+ YA+HGE  
Sbjct: 448 SDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHG 507

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            A+  +K M+  G  +P + TF  VL ACSHAGL + G ++F S+ +DY   P   H SC
Sbjct: 508 LALGLYKEMELEG-AEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSC 566

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           ++DLL RAG L +AE +IN+  ++     W +L  A   H +++     AG + + +   
Sbjct: 567 IIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVD 626

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           P+ YVLLSN++A  G     A++R  +   GV K+ G SWI
Sbjct: 627 PASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWI 667



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 209/449 (46%), Gaps = 55/449 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++SGH+++A+ L+  +     ++P + + ++ L+AC+NL     G ++HA   
Sbjct: 193 NAMIAAYAQSGHFEEAIRLYEDM----DVEPSVRTFTSVLSACSNLGLLDQGRKIHALIS 248

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    + N +L++Y   + L    ++F  +   DV SW+  ++A  +    D A E
Sbjct: 249 SRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIE 308

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
            + KM           + G                     VR + Y+FASVL  C   G 
Sbjct: 309 FYSKM----------QLEG---------------------VRPNYYTFASVLLACASVGD 337

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR +H  +  +G+   +    AL+ +Y + G++ +A  +F++ +    D   + V++
Sbjct: 338 LRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENR--DEGLWTVLI 395

Query: 264 DGLASVGRVEEALIRFRDMLVASLRP-SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
            G +  G     L  +R+M   +  P +++ +  V+SA  C  +G    A+   S  EA 
Sbjct: 396 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISA--CASLGAFADARQAHSDIEAD 453

Query: 323 TSVSN-----AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +S+     + + MYS  G ++ A  +F ++  +D ++W T+I+ YA+      A+  Y
Sbjct: 454 GMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLY 513

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAY 431
            EM+  G  P E TF  +L   + +G  E  + +  F+ I     +  NI   + +I   
Sbjct: 514 KEMELEGAEPSELTFMVVLYACSHAGLQEQGKQL--FISIQSDYAMHPNIAHYSCIIDLL 571

Query: 432 AKNERIKQAYQIFHNMSPR-NIITWNTLI 459
           ++  R+  A ++ + M    N +TW++L+
Sbjct: 572 SRAGRLSDAEELINAMPVEPNDVTWSSLL 600


>gi|356522600|ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 644

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 195/604 (32%), Positives = 317/604 (52%), Gaps = 18/604 (2%)

Query: 143 CEVFDKMPDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CD 200
           C+   K   R  P+  + +T CT +       + +  E H  D    +   A+ L V   
Sbjct: 3   CKFHFKKQLRFPPIPYSFVTQCTHSWSIIRASVPVPDETHFRDPHTVHLFCANALKVSAK 62

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
             LL  G+QLH+ + K GF  ++S+ N ++ +Y  C    DA K+FEE    V + +S+N
Sbjct: 63  RALLPEGKQLHAHLIKFGFCHVLSLQNQILGVYLKCTEADDAEKLFEELS--VRNVVSWN 120

Query: 261 VMMDGLASVGRVEE-------ALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
           +++ G+   G   E           F+ ML+  + P   TF  +   C+      +G+Q+
Sbjct: 121 ILIRGIVGCGDANENDSNQQQCFSYFKRMLLELVVPDSTTFNGLFGVCVKFHDIDMGFQL 180

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+K G +    V +  + +Y+ CG ++ A  +F  +Q +D+V WN MIS YA   L 
Sbjct: 181 HCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYALNCLP 240

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A + +  M+  G   DEFTF +LL+   S  + +  + +H  +      +++ V++AL
Sbjct: 241 EEAFVMFNLMRWDGANGDEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASAL 300

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+ YAKNE I  A+++F NM  RN++ WNT+I G+       + ++   E+L     PDE
Sbjct: 301 INMYAKNENIVDAHRLFDNMVIRNVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDE 360

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+S  +S C  +S++    Q H + +K++    +S+ N++I+ Y+KCG +  + + F +
Sbjct: 361 LTISSTISLCGYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRL 420

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
             E D +SW +LI+AYA HG  KEA   F+ M   G I PDQ +F  VLSACSH GLV  
Sbjct: 421 TREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCG-IIPDQISFLGVLSACSHCGLVTK 479

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ M + Y  +P   H +C++DLLGR G ++EA   + S  ++A S+   A  ++C
Sbjct: 480 GLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSMPMEAESNTLGAFVASC 539

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H N+ L +  A  L   E +K   Y ++SNIYA+   W +   +R ++      + PG
Sbjct: 540 NLHANIGLAKWAAEKLFTIEPEKNVNYAVMSNIYASHRHWSDVERVRRMMGNKCDARVPG 599

Query: 728 CSWI 731
           CSWI
Sbjct: 600 CSWI 603



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 51/406 (12%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD  + +     C    +   G QLH +A++ GL     V + ++ LY     + + +RV
Sbjct: 156 PDSTTFNGLFGVCVKFHDIDMGFQLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRV 215

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F  +Q+ D+  W   +S           C   + +P+    ++N M      NG      
Sbjct: 216 FLVVQHRDLVVWNVMIS-----------CYALNCLPEEAFVMFNLMRWD-GANG------ 257

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                        D ++F+++LS+CD+    +FG+Q+H  + +  F   V V +ALI MY
Sbjct: 258 -------------DEFTFSNLLSICDSLEYYDFGKQVHGHILRLSFDSDVLVASALINMY 304

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
               N+VDA ++F+     + + +++N ++ G  +     E +   R+ML     P ELT
Sbjct: 305 AKNENIVDAHRLFDNM--VIRNVVAWNTIIVGYGNRREGNEVMKLLREMLREGFSPDELT 362

Query: 294 FVSVMSACLCPRVGY--------QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
             S +S C     GY        Q HA A+KS F+ + SV+N+ I+ YS CG I  AC  
Sbjct: 363 ISSTISLC-----GYVSAITETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKC 417

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F   +E D+VSW ++I+ YA   L + A   + +M S GI PD+ +F  +L++     +V
Sbjct: 418 FRLTREPDLVSWTSLINAYAFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLV 477

Query: 406 -EMIHAFVFINGIITNIQVS---NALISAYAKNERIKQAYQIFHNM 447
            + +H F  +  +   +  S     L+    +   I +A++   +M
Sbjct: 478 TKGLHYFNLMTSVYKIVPDSGHYTCLVDLLGRYGLINEAFEFLRSM 523


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 200/715 (27%), Positives = 352/715 (49%), Gaps = 45/715 (6%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N  ++ LS  G +   L  ++ +  +H  + D Y+  +   AC NL   + G  LH   
Sbjct: 17  FNSLVSRLSYQGAHHQVLQTYISMQKTHT-QLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  GL    ++ ++++S Y                                K G +    
Sbjct: 76  VVNGLSHDSYIGSSLISFY-------------------------------AKFGCIHLGR 104

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD M  R++  +  +I   +  G  DI   +F++M +  ++  + +  S+L       
Sbjct: 105 KVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLP--GISK 162

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVM 262
           L     LH L+   GF   +++ N+++ MY  CG + DA ++F+      C D +S+N +
Sbjct: 163 LPLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQSID---CRDIVSWNSL 219

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           +   + +G  EE L   + M +  ++P + TF S +SA       R+G  VH   +K G 
Sbjct: 220 LSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGL 279

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A + +Y  C  +D A  +F    EKD+V W  MIS   Q +    A+  + +
Sbjct: 280 NIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQ 339

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M    ++P   T  S LA+    G  ++   IH +V   GI+ +I   N+L++ YAK  +
Sbjct: 340 MIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNK 399

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++Q+  IF+ M  +++++WN ++ G   NG+  +G+  F+E+  S LRPD  T++  L +
Sbjct: 400 LQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQA 459

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C    +L  GK IH +VL+++LI  +    A++ +Y KCG+L+ + + F+ M+++D ++W
Sbjct: 460 CGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAW 519

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           + LI  Y  +G+G+ A+  +      G ++P+   F +VLSACSH GL+  G  I++SM 
Sbjct: 520 STLIVGYGFNGKGEIALRKYSEFLGTG-MEPNHVIFISVLSACSHGGLISKGLSIYESMT 578

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D+   P  +H +C++DLL RAG +DEA         +        L  AC  +G + LG
Sbjct: 579 KDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELG 638

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++IA  + E +   P  +V L+N YA+   W+        ++  G+ K PG S I
Sbjct: 639 KVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 212/425 (49%), Gaps = 12/425 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           S+N ++  L+  G   + L  +  M     +    TF S+  AC    +   G  +H   
Sbjct: 16  SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           + +G    + + ++ I+ Y+  G I     +F  + ++++V W T+I +Y++      A 
Sbjct: 76  VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             + +M+  GI+P   T  SLL     + ++  +H  + ++G  +++ +SN++++ Y K 
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCLIILHGFESDLALSNSMVNMYGKC 195

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            RI  A ++F ++  R+I++WN+L++ +   G   + LQ    + + +++PD+ T   AL
Sbjct: 196 GRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSAL 255

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S+ A    LR GK +HG +LK+ L     + +A++ LY +C  LD + +VF    EKD +
Sbjct: 256 SASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVV 315

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
            W A+IS   Q+    +A+  F  M +   +KP  AT  + L+AC+  G  D G  I   
Sbjct: 316 MWTAMISGLVQNDCADKALGVFYQMIE-SNVKPSTATLASGLAACAQLGCCDIGASIHGY 374

Query: 615 MVNDYGF---IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           ++   G    IPA++ L  M     +   L ++  + N + ++    +W A+ +  A +G
Sbjct: 375 VLRQ-GIMLDIPAQNSLVTM---YAKCNKLQQSCSIFN-KMVEKDLVSWNAIVAGHAKNG 429

Query: 672 NLRLG 676
            L  G
Sbjct: 430 YLSKG 434



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 207/478 (43%), Gaps = 53/478 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  L+  S+ G  ++ L L +Q      +KPD  +  + L+A A   +   G  +H
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQL-LQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVH 271

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L+ GL    HV + ++ LY   R L    +VF      DV  WT             
Sbjct: 272 GLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWT------------- 318

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                             AMI+G  +N   D  +G+F +M + +V+    + AS L+ C 
Sbjct: 319 ------------------AMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G  + G  +H  V + G    +   N+L+TMY  C  +  +C +F   K    D +S+
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFN--KMVEKDLVSW 418

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQA 314
           N ++ G A  G + + +  F +M  + LRP  +T  S++ AC     LC   G  +H   
Sbjct: 419 NAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQ--GKWIHNFV 476

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           ++S          A + MY  CG ++ A   F  + ++D+V+W+T+I  Y     G  A+
Sbjct: 477 LRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIAL 536

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIIT-NIQVSNALISA 430
             Y E    G+ P+   F S+L++    G I     I+  +  +  ++ N++    ++  
Sbjct: 537 RKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDL 596

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRP 485
            ++  ++ +AY  +  M     I    ++ G LL+   V G     +++   M EL+P
Sbjct: 597 LSRAGKVDEAYSFYKMMFKEPSI----VVLGMLLDACRVNGRVELGKVIARDMFELKP 650



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 162/361 (44%), Gaps = 65/361 (18%)

Query: 13  NSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
            S T K++++   + ++ L ++     AL +F Q+  S+ +KP   +L++ LAACA L  
Sbjct: 307 KSTTEKDVVMWTAM-ISGLVQNDCADKALGVFYQMIESN-VKPSTATLASGLAACAQLGC 364

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
              G  +H Y LR G+       N+++++Y     L     +F+++   D+ SW      
Sbjct: 365 CDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSW------ 418

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
                                    NA++ G  +NGY   GI  F EM K  +R D+ + 
Sbjct: 419 -------------------------NAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITV 453

Query: 193 ASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            S+L  C  AG L  G+ +H+ V +S     +    AL+ MYF CGN+ +A K F+    
Sbjct: 454 TSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFD---- 509

Query: 252 YVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG 307
             C    D ++++ ++ G    G+ E AL ++ + L   + P+ + F+SV+SAC      
Sbjct: 510 --CMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSAC------ 561

Query: 308 YQVHAQAMKSGFEAYTSVSN------------AAITMYSSCGKIDEACMIFARL-QEKDI 354
              H   +  G   Y S++               + + S  GK+DEA   +  + +E  I
Sbjct: 562 --SHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSI 619

Query: 355 V 355
           V
Sbjct: 620 V 620


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 197/608 (32%), Positives = 317/608 (52%), Gaps = 16/608 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR--RDNYSFAS 194
           GH+ YA ++F++MP   L  YN +I      G     I +F  M    V+   D Y++  
Sbjct: 63  GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V     +   ++ G  +H  + +S F     V NAL+ MY N G V  A  VF+  K   
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR- 181

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D IS+N M+ G    G + +AL+ F  M+  S+     T VS++  C   +   +G  V
Sbjct: 182 -DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H    +        V NA + MY  CG++DEA  +F R++ +D+++W  MI+ Y +    
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
            +A+     MQ  G+RP+  T  SL++  G    V   + +H +     + ++I +  +L
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL 360

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           IS YAK +R+   +++F   S  +   W+ +I G + N      L  F  +   ++ P+ 
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            TL+  L + A ++ LR    IH Y+ K   +S +     ++ +Y+KCG L+ + ++FN 
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480

Query: 548 MIEK----DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           + EK    D + W ALIS Y  HG+G  A+  F  M   G + P++ TFT+ L+ACSH+G
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG-VTPNEITFTSALNACSHSG 539

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV++G  +F  M+  Y  +   +H +C++DLLGRAG LDEA  +I +   +  S  W AL
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
            +AC  H N++LG + A  L E E +    YVLL+NIYAA G W++   +R +++  G+ 
Sbjct: 600 LAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659

Query: 724 KQPGCSWI 731
           K+PG S I
Sbjct: 660 KKPGHSTI 667



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 144/560 (25%), Positives = 261/560 (46%), Gaps = 47/560 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
           LL  NI +    R G Y DA+ +F+++ S   K  PD Y+      A   L++   G  +
Sbjct: 80  LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   LR+      +V N +L++Y N                                G V
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMN-------------------------------FGKV 168

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           + A +VFD M +RD+  +N MI+G   NGY +  + +F  M    V  D+ +  S+L VC
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                LE GR +H LV +      + V NAL+ MY  CG + +A  VF+  +    D I+
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR--DVIT 286

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +  M++G    G VE AL   R M    +RP+ +T  S++S C   L    G  +H  A+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +    +   +  + I+MY+ C ++D    +F+   +     W+ +I+   Q  L   A+ 
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406

Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  M+   + P+  T  SLL   A+   +     IH ++   G ++++  +  L+  Y+
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466

Query: 433 KNERIKQAYQIFHNM----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           K   ++ A++IF+ +      ++++ W  LI+G+ ++G     LQ F E++ S + P+E 
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T + AL++C+    +  G  +  ++L++   +++ +    ++ L  + G LD +  +   
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586

Query: 548 M-IEKDTISWNALISAYAQH 566
           +  E  +  W AL++A   H
Sbjct: 587 IPFEPTSTVWGALLAACVTH 606



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 229/460 (49%), Gaps = 17/460 (3%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           +++ L   Y  CG++  A K+FEE        +SYN+++      G   +A+  F  M+ 
Sbjct: 51  ILSTLSVTYALCGHITYARKLFEEMPQ--SSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108

Query: 285 ASLR--PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
             ++  P   T+  V  A       ++G  VH + ++S F     V NA + MY + GK+
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           + A  +F  ++ +D++SWNTMIS Y +      A++ +  M +  +  D  T  S+L   
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228

Query: 400 GFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G ++ +EM   +H  V    +   I+V NAL++ Y K  R+ +A  +F  M  R++ITW 
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +ING+  +G     L+    +    +RP+  T++  +S C     +  GK +HG+ ++ 
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            + S + +  ++I++YAKC  +D   RVF+   +  T  W+A+I+   Q+    +A+  F
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI-FDSMVNDYGFIPAEDHLSCMLDLL 635
           K M+    ++P+ AT  ++L A  +A L D    +     +   GF+ + D  + ++ + 
Sbjct: 409 KRMRRED-VEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465

Query: 636 GRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGN 672
            + G L+ A ++ N    + +S +   W AL S    HG+
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 207/425 (48%), Gaps = 20/425 (4%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +  G  +   +S  ++T Y+ CG I  A  +F  + +  ++S+N +I  Y +  L
Sbjct: 37  LHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95

Query: 370 GRSAILAYLEMQSVGIR--PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVS 424
              AI  ++ M S G++  PD +T+  +  ++G ++ +++   +H  +  +    +  V 
Sbjct: 96  YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL++ Y    +++ A  +F  M  R++I+WNT+I+G+  NG+    L  F  ++   + 
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
            D  T+   L  C  +  L  G+ +H  V +  L  K+ + NA++ +Y KCG +D +  V
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M  +D I+W  +I+ Y + G+ + A+   + MQ  G ++P+  T  +++S C  A  
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRPNAVTIASLVSVCGDALK 334

Query: 605 VDDGTRIFDSMVND--YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           V+DG  +    V    Y  I  E   + ++ +  +   +D   RV +    +  +  W A
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIE---TSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSA 390

Query: 663 LFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVL--LSNIYAAAGLWEEAANIRELLK 718
           + + C  +    L     GL   + RE  +P++  L  L   YAA     +A NI   L 
Sbjct: 391 IIAGCVQN---ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447

Query: 719 RTGVI 723
           +TG +
Sbjct: 448 KTGFM 452


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 199/647 (30%), Positives = 342/647 (52%), Gaps = 20/647 (3%)

Query: 99  LSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           L+L  NA  L  + ++ +++     + D+ S T        +G V +  ++F+K+   DL
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGLLE---FGRQL 210
            ++N +I G ++NG     I L+  + K  ++R DN+++A  +S   A  LE    G  L
Sbjct: 78  FLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISA--ASRLEDERVGVLL 135

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+     G +  + V +A++ +YF       A KVF+       D + +N M+ G +   
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER--DTVLWNTMISGFSRNS 193

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
             E+++  F DML   L     T  +V++A       R+G  +   A K G  +   V  
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             I++YS CGK  +  ++F ++ + D++S+N MIS Y   +   SA+  + E+ + G R 
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313

Query: 388 DEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  T   L+        +++  +I       GII    VS AL + Y +   ++ A Q+F
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                +++ +WN +I+G+  NG   + +  F E+ M +L P+  T++  LS+CA++ +L 
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALS 432

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +HG +    L S + +  A++ +YAKCG +  + ++F++M++K+ ++WNA+I+ Y 
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYG 492

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG GKEA+  F  M   G I P   TF ++L ACSH+GLV +G  IF SM N+YGF P 
Sbjct: 493 LHGHGKEALKLFYEMLQSG-IPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPM 551

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H +CM+D+LGRAG L  A   I    ++     W AL  AC  H N  +  + +  L 
Sbjct: 552 SEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF 611

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + +    YVLLSNIY+    + +AA++R+++K+  + K PGC+ I
Sbjct: 612 QLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 261/594 (43%), Gaps = 48/594 (8%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +  SK  L   N+ +   S +G  + ++ L+  +     L+PD ++ +  ++A + L + 
Sbjct: 70  NKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDE 129

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  LHA+++  G+ +   V + I+ LY         ++VF  +   D   W T     
Sbjct: 130 RVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT----- 184

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                     MI+G + N Y +  I +F +M  + +  D+ + A
Sbjct: 185 --------------------------MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLA 218

Query: 194 SVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +VL+ V +      G  +  L +K G    V V+  LI++Y  CG       +F++    
Sbjct: 219 TVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ- 277

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGY 308
             D ISYN M+ G       E A+  FR++L +  R +  T V ++   L P    ++  
Sbjct: 278 -PDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL-PFNHLQLSR 335

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
            +   ++K G     SVS A  T+Y    ++  A  +F    EK + SWN MIS Y Q  
Sbjct: 336 LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNG 395

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
           L   AI  + EM    + P+  T  S+L   A  G + + + +H  +    + +N+ VS 
Sbjct: 396 LTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST 454

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+  YAK   I +A Q+F  M  +N++TWN +I G+ L+G   + L+ F E+L S + P
Sbjct: 455 ALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPP 514

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRV 544
              T    L +C+    +  G +I   +  N     MS   A M+ +  + G L  +L  
Sbjct: 515 TGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEF 574

Query: 545 FNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              M +E     W AL+ A   H   + A     A + + ++ P+   +  +LS
Sbjct: 575 IERMPLEPGPAVWGALLGACMIHKNTEMANV---ASKRLFQLDPENVGYYVLLS 625



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 117/218 (53%), Gaps = 3/218 (1%)

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            IR   F F +LL ++  +  +  I A + ++GI  ++     L   +     +    Q+
Sbjct: 10  AIRGQRF-FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISS 502
           F+ +S  ++  +N LI GF  NG P   +  ++ L   + LRPD +T + A+S+ +R+  
Sbjct: 69  FNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLED 128

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            R G  +H + + + + S + +G+A++ LY K    + + +VF++M E+DT+ WN +IS 
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           ++++   ++++  F  M DVG +  D  T   VL+A +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVG-LSFDSTTLATVLTAVA 225


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 199/647 (30%), Positives = 342/647 (52%), Gaps = 20/647 (3%)

Query: 99  LSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           L+L  NA  L  + ++ +++     + D+ S T        +G V +  ++F+K+   DL
Sbjct: 18  LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVCDAGLLE---FGRQL 210
            ++N +I G ++NG     I L+  + K  ++R DN+++A  +S   A  LE    G  L
Sbjct: 78  FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISA--ASRLEDERVGVLL 135

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+     G +  + V +A++ +YF       A KVF+       D + +N M+ G +   
Sbjct: 136 HAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER--DTVLWNTMISGFSRNS 193

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
             E+++  F DML   L     T  +V++A       R+G  +   A K G  +   V  
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             I++YS CGK  +  ++F ++ + D++S+N MIS Y   +   SA+  + E+ + G R 
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313

Query: 388 DEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  T   L+        +++  +I       GII    VS AL + Y +   ++ A Q+F
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                +++ +WN +I+G+  NG   + +  F E+ M +L P+  T++  LS+CA++ +L 
Sbjct: 374 DESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALS 432

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +HG +    L S + +  A++ +YAKCG +  + ++F++M++K+ ++WNA+I+ Y 
Sbjct: 433 IGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYG 492

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG GKEA+  F  M   G I P   TF ++L ACSH+GLV +G  IF SM N+YGF P 
Sbjct: 493 LHGHGKEALKLFYEMLQSG-IPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPM 551

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H +CM+D+LGRAG L  A   I    ++     W AL  AC  H N  +  + +  L 
Sbjct: 552 SEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLF 611

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + +    YVLLSNIY+    + +AA++R+++K+  + K PGC+ I
Sbjct: 612 QLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 261/594 (43%), Gaps = 48/594 (8%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           +  SK  L   N+ +   S +G  + ++ L+  +     L+PD ++ +  ++A + L + 
Sbjct: 70  NKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDE 129

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  LHA+++  G+ +   V + I+ LY         ++VF  +   D   W T     
Sbjct: 130 RVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNT----- 184

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                                     MI+G + N Y +  I +F +M  + +  D+ + A
Sbjct: 185 --------------------------MISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLA 218

Query: 194 SVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +VL+ V +      G  +  L +K G    V V+  LI++Y  CG       +F++    
Sbjct: 219 TVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQ- 277

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGY 308
             D ISYN M+ G       E A+  FR++L +  R +  T V ++   L P    ++  
Sbjct: 278 -PDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL-PFNHLQLSR 335

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
            +   ++K G     SVS A  T+Y    ++  A  +F    EK + SWN MIS Y Q  
Sbjct: 336 LIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQNG 395

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSN 425
           L   AI  + EM    + P+  T  S+L   A  G + + + +H  +    + +N+ VS 
Sbjct: 396 LTDRAISLFQEMMP-QLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVST 454

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+  YAK   I +A Q+F  M  +N++TWN +I G+ L+G   + L+ F E+L S + P
Sbjct: 455 ALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPP 514

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRV 544
              T    L +C+    +  G +I   +  N     MS   A M+ +  + G L  +L  
Sbjct: 515 TGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALEF 574

Query: 545 FNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              M +E     W AL+ A   H   + A     A + + ++ P+   +  +LS
Sbjct: 575 IERMPLEPGPAVWGALLGACMIHKNTEMANV---ASKRLFQLDPENVGYYVLLS 625



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 117/218 (53%), Gaps = 3/218 (1%)

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            IR   F F +LL ++  +  +  I A + ++GI  ++     L   +     +    Q+
Sbjct: 10  AIRGQRF-FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISS 502
           F+ +S  ++  +N LI GF  NG P   +  ++ L   + LRPD +T + A+S+ +R+  
Sbjct: 69  FNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLED 128

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            R G  +H + + + + S + +G+A++ LY K    + + +VF++M E+DT+ WN +IS 
Sbjct: 129 ERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISG 188

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           ++++   ++++  F  M DVG +  D  T   VL+A +
Sbjct: 189 FSRNSYFEDSIRVFVDMLDVG-LSFDSTTLATVLTAVA 225


>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 218/675 (32%), Positives = 332/675 (49%), Gaps = 69/675 (10%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+F  + + ++ ++ + +S   K   +  A ++FD+M  R+L  +N MI G   N   + 
Sbjct: 38  RIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEE 97

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVT-KSGFSCLVSVVNALI 230
              LF  M +    RDN+S+A +++     G LE  R+L  LV  K   +C     NA+I
Sbjct: 98  ASELFDVMPE----RDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW----NAMI 149

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-------- 282
             Y   G   DA KVFE+      D +SYN M+ G    G++  AL  F  M        
Sbjct: 150 AGYAKKGQFNDAKKVFEQMPAK--DLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSW 207

Query: 283 --LVASL-----------------RPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
             +VA                    P+ +++V+++  C   + G    A+ +     +  
Sbjct: 208 NLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTML--CGLAKYGKMAEARELFDRMPSKN 265

Query: 324 SVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            VS NA I  Y    ++DEA  +F ++  KD VSW T+I+ Y +      A   Y +M  
Sbjct: 266 VVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPC 325

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMI-----HAFVFINGIITNIQVS------------- 424
             I         L+ +    E  +M      H  V  N +I     S             
Sbjct: 326 KDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQM 385

Query: 425 --------NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
                   N +IS YA+  ++ +A +IF  M  +NI++WN+LI GFL N   +  L+   
Sbjct: 386 PIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLV 445

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +     +PD+ T +  LS+CA +++L+ G Q+H Y+LK+  ++ + +GNA+I +YAKCG
Sbjct: 446 MMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCG 505

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  + +VF  +   D ISWN+LIS YA +G   +A   F+ M    R+ PD+ TF  +L
Sbjct: 506 RVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSS-ERVVPDEVTFIGML 564

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SACSHAGL + G  IF  M+ D+   P  +H SC++DLLGR G L+EA   +    ++A 
Sbjct: 565 SACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKAN 624

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W +L  AC  H NL LGR  A  L E E    S Y+ LSN++A AG WEE   +R L
Sbjct: 625 AGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRML 684

Query: 717 LKRTGVIKQPGCSWI 731
           ++     KQPGCSWI
Sbjct: 685 MRGKRAGKQPGCSWI 699



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 137/549 (24%), Positives = 266/549 (48%), Gaps = 63/549 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++ G + DA  +F Q+ +      D+ S ++ LA            Q      
Sbjct: 146 NAMIAGYAKKGQFNDAKKVFEQMPAK-----DLVSYNSMLAGYTQNGKMHLALQFFESMT 200

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              + ++    N +++ Y  + DL S  ++F +I NP+  SW T L    K G +  A E
Sbjct: 201 ERNVVSW----NLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARE 256

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
           +FD+MP +++  +NAMI    ++   D  + LF++M      +D+ S+ ++++     G 
Sbjct: 257 LFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMP----HKDSVSWTTIINGYIRVGK 312

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+  RQ+++ +     +   ++++ LI      G + +A ++F     +  D + +N M+
Sbjct: 313 LDEARQVYNQMPCKDITAQTALMSGLI----QNGRIDEADQMFSRIGAH--DVVCWNSMI 366

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G +  GR++EAL  FR M + +                                     
Sbjct: 367 AGYSRSGRMDEALNLFRQMPIKN------------------------------------- 389

Query: 324 SVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           SVS N  I+ Y+  G++D A  IF  ++EK+IVSWN++I+ + Q NL   A+ + + M  
Sbjct: 390 SVSWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGK 449

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G +PD+ TF   L++   +  +++   +H ++  +G + ++ V NALI+ YAK  R++ 
Sbjct: 450 EGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQS 509

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A Q+F ++   ++I+WN+LI+G+ LNG+  +  + F ++    + PDE T    LS+C+ 
Sbjct: 510 AEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSH 569

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLR-VFNMMIEKDTISWN 557
                 G  I   ++++  I  ++   + ++ L  + G L+ +   V  M ++ +   W 
Sbjct: 570 AGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWG 629

Query: 558 ALISAYAQH 566
           +L+ A   H
Sbjct: 630 SLLGACRVH 638



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 188/429 (43%), Gaps = 59/429 (13%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ----------------RNL- 369
           N  I      GK++EA  IF  +  K++V++N+MIS  A+                RNL 
Sbjct: 21  NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLV 80

Query: 370 -GRSAILAYLEMQSV-------GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNI 421
              + I  YL    V        + P+   F   L  + +    ++  A   +  +   +
Sbjct: 81  SWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKL 140

Query: 422 QVS--NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
             +  NA+I+ YAK  +   A ++F  M  ++++++N+++ G+  NG     LQ F    
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFES-- 198

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
           M+E     + L VA     +   L    Q+   +   N +S ++    M+   AK G + 
Sbjct: 199 MTERNVVSWNLMVA--GYVKSGDLSSAWQLFEKIPNPNAVSWVT----MLCGLAKYGKMA 252

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  +F+ M  K+ +SWNA+I+ Y Q  +  EAV  FK M        D  ++T +++  
Sbjct: 253 EARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMP-----HKDSVSWTTIINGY 307

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAED--HLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
              G +D+  ++++ M       P +D    + ++  L + G +DEA+++ +   I A  
Sbjct: 308 IRVGKLDEARQVYNQM-------PCKDITAQTALMSGLIQNGRIDEADQMFS--RIGAHD 358

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLERE---QDKPSVYVLLSNIYAAAGLWEEAANIR 714
              W    A    G  R GR+   L L R+   ++  S   ++S  YA AG  + A  I 
Sbjct: 359 VVCWNSMIA----GYSRSGRMDEALNLFRQMPIKNSVSWNTMISG-YAQAGQMDRATEIF 413

Query: 715 ELLKRTGVI 723
           + ++   ++
Sbjct: 414 QAMREKNIV 422



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 87/164 (53%), Gaps = 5/164 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A   ++  Y DAL   V +    K KPD  + + TL+ACANL     GNQLH
Sbjct: 421 IVSWNSLIAGFLQNNLYLDALKSLVMMGKEGK-KPDQSTFACTLSACANLAALQVGNQLH 479

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y L++G      V N ++++Y     + S ++VF +I+  D+ SW + +S     G+ +
Sbjct: 480 EYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYAN 539

Query: 141 YACEVFDKM-PDRDLP---VYNAMITGCTENGYEDIGIGLFREM 180
            A + F++M  +R +P    +  M++ C+  G  + G+ +F+ M
Sbjct: 540 KAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCM 583


>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 831

 Score =  328 bits (841), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 197/725 (27%), Positives = 351/725 (48%), Gaps = 84/725 (11%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           + LN  +  + ++G+ + AL  +  +     +KP   + +T  +AC  L++   G + H 
Sbjct: 103 VSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHG 162

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
             L+ G  +  +V+N +L +Y          RVF  I  P+  ++TT             
Sbjct: 163 LVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTT------------- 209

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
                             M+ G ++      G+ LFR M +  +  D+ S +++L +C  
Sbjct: 210 ------------------MMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAK 251

Query: 202 GLLEFG--------------RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           G+  FG              +Q+H+L  K GF   + + N+L+ MY   G++  A  VFE
Sbjct: 252 GV-SFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG 307
               +    +S+N+M+ G  +    E+AL  F+ M      P ++T++++++AC+     
Sbjct: 311 NLDKHSV--VSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACV----- 363

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
                                        G +     IF  +    ++SWN ++S Y Q 
Sbjct: 364 ---------------------------KSGDVKVGRQIFDCMSSPSLISWNAILSGYNQS 396

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVS 424
                A+  + +MQ     PD  T   +L+S    G +E  + +HA     G   ++ V+
Sbjct: 397 ADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVA 456

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           ++LI+ Y+K  +++ +  +F  +S  +++ WN++I GF +N      L  F  +      
Sbjct: 457 SSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFF 516

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P E++ +   SSCA++SSL  G+QIH  ++K+  +  + +G++++ +Y KCGD+  +   
Sbjct: 517 PSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYY 576

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+MM  K+ ++WN +I  YA +G G EAVS +K M   G  KPD  TF AVL+ACSH+ L
Sbjct: 577 FDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGE-KPDDITFVAVLTACSHSAL 635

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           VD+G  IF SM+  +  +P  DH +C++D LGR G  +E E ++++   +  +  W  + 
Sbjct: 636 VDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVL 695

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           S+C  H N+ L +  A  L        + YVLL+N+Y++ G W++A  +R+L+    + K
Sbjct: 696 SSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHK 755

Query: 725 QPGCS 729
            PG S
Sbjct: 756 DPGYS 760



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 167/583 (28%), Positives = 288/583 (49%), Gaps = 57/583 (9%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L   L +C   ++ +    +HA   R  L +   + N ++ LY     + S   VF +I
Sbjct: 7   NLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKI 66

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            + +++S+   LSA  K  ++ YAC +F +MP+R+    N +IT   +NGYE   +  + 
Sbjct: 67  PHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYD 126

Query: 179 EMHKLD-VRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFN 235
            M   + V+  + +FA+V S C  GL +   GR+ H LV K GF   + V NAL+ MY  
Sbjct: 127 LMMVYESVKPSHITFATVFSAC-GGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTK 185

Query: 236 CGNVVDACKVFEEAKGYV-CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           CG   DA +VFE   G V  + +++  MM GL+   +V+E L  FR ML   +    ++ 
Sbjct: 186 CGLNEDAFRVFE---GIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSL 242

Query: 295 VSVMSAC-------LCPRV--------GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
            +++  C       +C           G Q+H  A+K GFE    + N+ + MY+  G +
Sbjct: 243 STILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDM 302

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           D A  +F  L +  +VSWN MIS Y  R     A+  +  MQ  G  PD+ T        
Sbjct: 303 DSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVT-------- 354

Query: 400 GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
                        +IN           +++A  K+  +K   QIF  MS  ++I+WN ++
Sbjct: 355 -------------YIN-----------MLTACVKSGDVKVGRQIFDCMSSPSLISWNAIL 390

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
           +G+  +    + ++ F ++      PD  TL++ LSSCA +  L  GKQ+H    K    
Sbjct: 391 SGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFY 450

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
             + + +++I +Y+KCG ++ S  VF+ + E D + WN++I+ ++ +   ++A++CFK M
Sbjct: 451 DDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRM 510

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +  G   P + +F  + S+C+    +  G +I   ++ D G++
Sbjct: 511 RQFGFF-PSEFSFATIASSCAKLSSLFQGQQIHAQIIKD-GYV 551



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 28/418 (6%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY-LEMQSVGI 385
           NA ++ +     +  AC +F ++ E++ VS NT+I+T  +    R A+  Y L M    +
Sbjct: 75  NAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESV 134

Query: 386 RPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P   TF ++ ++ G ++ V      H  V   G  +NI VSNAL+  Y K    + A++
Sbjct: 135 KPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFR 194

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR--- 499
           +F  +   N +T+ T++ G        +GL+ F  +L   +  D  +LS  L  CA+   
Sbjct: 195 VFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVS 254

Query: 500 ---------ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
                    +S+   GKQIH   +K+     + L N+++ +YAK GD+D +  VF  + +
Sbjct: 255 FGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDK 314

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
              +SWN +IS Y    + ++A+ CF+ MQ  G  +PD  T+  +L+AC  +G V  G +
Sbjct: 315 HSVVSWNIMISGYGNRCDSEKALECFQRMQCCG-YEPDDVTYINMLTACVKSGDVKVGRQ 373

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---FSAC 667
           IFD M +     P+    + +L    ++    EA  +      Q ++ +   L    S+C
Sbjct: 374 IFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSC 428

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVL--LSNIYAAAGLWEEAANIRELLKRTGVI 723
           A  G L  G+ +   + ++      VYV   L N+Y+  G  E + ++   L    V+
Sbjct: 429 AELGLLEAGKQVHA-VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVV 485



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 123/242 (50%), Gaps = 15/242 (6%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           NI   NA++SA+ K+  ++ A ++F  M  RN ++ NT+I   + NG+  Q L  +  ++
Sbjct: 70  NIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMM 129

Query: 480 MSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           + E ++P   T +   S+C  +  +  G++ HG VLK    S + + NA++ +Y KCG  
Sbjct: 130 VYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLN 189

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + + RVF  ++E + +++  ++   +Q  + KE +  F+ M   G I  D  + + +L  
Sbjct: 190 EDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKG-ICVDSVSLSTILVI 248

Query: 599 CSHA---GLVDD---------GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           C+     G+ DD         G +I  ++   +GF       + +LD+  + G +D AE 
Sbjct: 249 CAKGVSFGVCDDSRGLSTNAQGKQI-HTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAEN 307

Query: 647 VI 648
           V 
Sbjct: 308 VF 309


>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
          Length = 674

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 180/541 (33%), Positives = 303/541 (56%), Gaps = 15/541 (2%)

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G L  G+QLH+ V K G   L+S+ N ++ +Y  C    D CK+F+E    + + +S+N 
Sbjct: 87  GFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMP--LKNVVSWNT 144

Query: 262 MMDGLASVGRVEEALIR-----FRDMLVASLRPSELTFVSVMSACL-CPRVGY--QVHAQ 313
           ++ G+   G  + AL+R     FR M++  + P+ +T   ++ A +    VG   Q+H  
Sbjct: 145 LICGVVE-GNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +KSGF++   V +A +  Y+  G +DEA   F  +  +D+V WN M+S YA   +   A
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISA 430
              +  M+  G++ D FTF S++ S G +    + + +H  +       ++ V++AL+  
Sbjct: 264 FGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVDM 323

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+KNE I+ A + F  M  +NI++W T+  G+  +G   + ++   E++     PDE  L
Sbjct: 324 YSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDELAL 383

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LSSC  +S+     Q+H YV++N   + +S+ NA+++ Y+KCG +  + + F+ + E
Sbjct: 384 ASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAE 443

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            D ISW +L+ AYA HG  K+ V  F+ +     ++PD+  F  VLSAC+H G V +G  
Sbjct: 444 PDIISWTSLMGAYAFHGLSKQGVDVFEKILS-SNVRPDKVAFLGVLSACAHGGFVLEGLH 502

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            F+ M+N Y  +P  +H + ++DLLGRAG+LDEA  ++ S  ++ RSD   A   AC  +
Sbjct: 503 YFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGACKVY 562

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ L R  +  L   E ++P  Y L+SN+YA+ G W + A +R+L++     K PGCSW
Sbjct: 563 RNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPGCSW 622

Query: 731 I 731
           +
Sbjct: 623 M 623



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 42/366 (11%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + P+  +L+  L A   L +     QLH + L++G  +   V + ++  Y          
Sbjct: 174 MAPNCITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSY---------- 223

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 K G VD A   FD++  RDL ++N M++    NG +  
Sbjct: 224 ---------------------AKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGK 262

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
             G+F+ M    V+ D ++F S+++ C   G    G+Q+H L+ +  F   V V +AL+ 
Sbjct: 263 AFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASALVD 322

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY    N+ DA K F+     V + +S+  M  G    G  +E +   ++M+     P E
Sbjct: 323 MYSKNENIEDARKAFDGM--JVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPDE 380

Query: 292 LTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           L   S++S+C          QVHA  +++GFEA+ S++NA ++ YS CG I  A   F+ 
Sbjct: 381 LALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSS 440

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           + E DI+SW +++  YA   L +  +  + ++ S  +RPD+  F  +L   A  GF+  +
Sbjct: 441 VAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFV--L 498

Query: 406 EMIHAF 411
           E +H F
Sbjct: 499 EGLHYF 504



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 5/219 (2%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A  GF+   + +HA V   G    + + N ++  Y K +      ++F  M  +N+++WN
Sbjct: 84  AKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWN 143

Query: 457 TLINGFLLNGFPVQ----GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           TLI G +           G   F ++++  + P+  TL+  L +   ++ +   +Q+H +
Sbjct: 144 TLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCF 203

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           +LK+   S   +G+A++  YAK G +D +   F+ +  +D + WN ++S YA +G   +A
Sbjct: 204 ILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKA 263

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              FK M+  G +K D  TFT+++++C   G    G ++
Sbjct: 264 FGVFKLMRLEG-VKGDXFTFTSMINSCGVLGSCGLGKQV 301



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 31/204 (15%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD  +L++ L++C NL   +   Q+HAY +  G +A+  +AN ++S Y     + S  + 
Sbjct: 378 PDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQS 437

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDRDLPVYNAMITGCTENG 168
           FS +  PD+ SWT+ + A    G      +VF+K+      PD+    +  +++ C   G
Sbjct: 438 FSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDK--VAFLGVLSACAHGG 495

Query: 169 YEDIGIGLFREMHKL-DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVN 227
           +   G+  F  M  +  +  D+  + S++                L+ ++GF  L   VN
Sbjct: 496 FVLEGLHYFNLMINVYQIMPDSEHYTSII---------------DLLGRAGF--LDEAVN 538

Query: 228 ALITMYF-----NCGNVVDACKVF 246
            L +M         G  + ACKV+
Sbjct: 539 LLTSMPVEPRSDTLGAFLGACKVY 562



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S AL   A++  L  GKQ+H +V+K    + +SL N ++ +Y KC + +   ++F+ M  
Sbjct: 77  SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136

Query: 551 KDTISWNALISAYAQHGEGKEAV-----SCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           K+ +SWN LI    + G  K A+      CF+ M  +  + P+  T   +L A     L 
Sbjct: 137 KNVVSWNTLICGVVE-GNCKFALVRLGFHCFRQMV-LEMMAPNCITLNGLLRASIE--LN 192

Query: 606 DDGT-RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           D G  R     +   GF       S ++D   + G +DEA+   +   + +R    W + 
Sbjct: 193 DVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD--EVSSRDLVLWNVM 250

Query: 665 SACAA 669
            +C A
Sbjct: 251 VSCYA 255


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  328 bits (840), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 205/654 (31%), Positives = 345/654 (52%), Gaps = 27/654 (4%)

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG-------HVDYACEVFDKM 149
           ++L  +  ++     KR+ + I    ++S +     C+K+        H  YA  +FDK+
Sbjct: 16  SLLGKFSASQSHSETKRLHALILTLGIFSSSNL---CSKLATTYAQCHHASYASHLFDKL 72

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR---DNYSFASVLSVC-DAGLLE 205
               L  +NAM+    + G     + LF EM  L   R   D +++  V+  C D  L++
Sbjct: 73  SQPCLFSWNAMMRMYVQIGRPFDALNLFVEM--LGSGRTLPDKFTYPVVIKACGDLSLID 130

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G  +H    K G+     V N L+ MY N G    A  VF+  +      IS+N M++G
Sbjct: 131 VGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTV--ISWNTMING 188

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY 322
                  E+A+  +  M+   + P   T VSV+ AC   +   +G +VH    + GF   
Sbjct: 189 YFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGN 248

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V NA + MY  CG++ EA ++   + +KD+V+W T+I+ Y      RSA++    MQ 
Sbjct: 249 IVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQC 308

Query: 383 VGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G++P+  +  SLL++ G   ++   + +HA+     I + + V  ALI+ YAK      
Sbjct: 309 EGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNL 368

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           +Y++F   S +    WN L++GF+ N    + ++ F ++L+ +++PD  T +  L + A 
Sbjct: 369 SYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAI 428

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM--MIEKDTISWN 557
           ++ L+    IH Y++++  + ++ + + ++ +Y+KCG L  + ++FN+  + +KD I W+
Sbjct: 429 LADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWS 488

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+I+AY +HG GK AV  F  M   G +KP+  TFT+VL ACSHAGLV++G  +F+ M+ 
Sbjct: 489 AIIAAYGKHGHGKMAVKLFNQMVQSG-VKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLK 547

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            +  I   DH +CM+DLLGRAG L++A  +I +  I      W AL  AC  H N+ LG 
Sbjct: 548 QHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGE 607

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A    + E +    YVLL+ +YAA G W +A  +R+++   G+ K P  S I
Sbjct: 608 VAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLI 661



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 162/626 (25%), Positives = 289/626 (46%), Gaps = 57/626 (9%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  L   N  +    + G   DAL+LFV++  S +  PD ++    + AC +L     G
Sbjct: 73  SQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVG 132

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H    + G  +   V NT+L++Y NA +  + + VF  +Q   V SW          
Sbjct: 133 VGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISW---------- 182

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                N MI G   N   +  + ++  M  + V  D  +  SVL
Sbjct: 183 ---------------------NTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVL 221

Query: 197 SVCDAGLL---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY- 252
             C  GLL   E GR++H+LV + GF   + V NAL+ MY  CG + +A  +   AKG  
Sbjct: 222 PAC--GLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLL---AKGMD 276

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
             D +++  +++G    G    AL+    M    ++P+ ++  S++SAC   +    G  
Sbjct: 277 DKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKC 336

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA A++   E+   V  A I MY+ C   + +  +F    +K    WN ++S + Q  L
Sbjct: 337 LHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRL 396

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNA 426
            R AI  + +M    ++PD  TF SLL +   +  ++    IH ++  +G +  ++V++ 
Sbjct: 397 AREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASI 456

Query: 427 LISAYAKNERIKQAYQIFH--NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           L+  Y+K   +  A+QIF+  ++  ++II W+ +I  +  +G     ++ F++++ S ++
Sbjct: 457 LVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVK 516

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLR 543
           P+  T +  L +C+    +  G  +  ++LK + +IS +     MI L  + G L+ +  
Sbjct: 517 PNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYN 576

Query: 544 VFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +   M I  +   W AL+ A   H E  E      A +   +++P+      +L+    A
Sbjct: 577 LIRTMPITPNHAVWGALLGACVIH-ENVELGEV--AARWTFKLEPENTGNYVLLAKLYAA 633

Query: 603 -GLVDDGTRIFDSMVNDYGF--IPAE 625
            G   D  R+ D MVN+ G   +PA 
Sbjct: 634 VGRWGDAERVRD-MVNEVGLRKLPAH 658


>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
          Length = 814

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 197/615 (32%), Positives = 327/615 (53%), Gaps = 18/615 (2%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV- 185
           +  L    K+G VD A + F +    D  V+ AM+ G   NG  + G  +F EM  L + 
Sbjct: 156 SGLLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLG 215

Query: 186 -RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDA 242
              + +S  SVL       +  G Q+  L  K G    C + + NAL+ MY  CG+  DA
Sbjct: 216 LELNEFSLTSVLGALSD--VREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDA 273

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            K+F+E      D +S+    + + +     EA   FR +L  ++  +E   ++V+SA  
Sbjct: 274 IKMFDEMTE--PDVVSWT---ERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMR 328

Query: 303 CPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P++   G Q+     K+G+    SV+NA I MY  CG++  A  IF  +   D VSWN+
Sbjct: 329 EPKLLKSGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNS 388

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           +I+ YA+  L + A+  + +M+   ++P+++T  S+L   A+S F E    IH+++   G
Sbjct: 389 LIAGYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLG 448

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
            I +  + + LI+AY K   I ++ +++ ++S  N++  N +    +  G     L+ F 
Sbjct: 449 FIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQ 508

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
                    D  TLS+ L +C  ++ L +G+ IH   LK+ +     + +A+I +Y KCG
Sbjct: 509 TGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCG 568

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +D + + F  + + + ++WNA++  YAQHG   E    F  M ++G I+PD+ T+  VL
Sbjct: 569 TVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELG-IQPDEITYLGVL 627

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           ++C HAGLV++      SM+  +G +P  +H +CM+DL GR G L++A+R I+   I   
Sbjct: 628 NSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPD 687

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W  L S C  HGN+ LG + A  L+E + +  S YVLLSN+YA+AG W     +R +
Sbjct: 688 AQIWQILLSGCNIHGNVDLGEVAAKKLIELQPENDSAYVLLSNLYASAGRWNAVGKLRRV 747

Query: 717 LKRTGVIKQPGCSWI 731
           +K+  + K+PG SWI
Sbjct: 748 MKKKIICKEPGSSWI 762



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 250/547 (45%), Gaps = 53/547 (9%)

Query: 34  SGHYQDALHLFVQIHS-SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL--KA 90
           +G ++    +FV++      L+ + +SL++ L A +++R    G Q+   +++ GL    
Sbjct: 196 NGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGALSDVRE---GEQVFGLSVKMGLLCGC 252

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             H+ N ++++Y          ++F E+  PDV SWT       ++G    A E F+   
Sbjct: 253 SIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWT------ERIGAAYDAIEAFE--- 303

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
                                    LFR +   ++  + Y   +VLS   +  LL+ GRQ
Sbjct: 304 -------------------------LFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQ 338

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLAS 268
           +  L  K+G+  + SV NALI MY  CG +V A  +F+E    +C D +S+N ++ G A 
Sbjct: 339 IQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEM---LCGDSVSWNSLIAGYAE 395

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
            G +++AL  F  M    L+P++ T  S++        P    Q+H+  +K GF    S+
Sbjct: 396 NGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSM 455

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            +  IT Y  C  I E+  +++ + + +++  N M +T         A+  +     +  
Sbjct: 456 LSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQ 515

Query: 386 RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             D  T   +L + G +  +E    IH+    +G+  +  V +A+I  Y K   + +A +
Sbjct: 516 EVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAK 575

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F N+S  N++ WN ++ G+  +G   +  + F+++L   ++PDE T    L+SC     
Sbjct: 576 TFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGL 635

Query: 503 LRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
           +         +L+ + ++  +     MI L+ + G L+ + R  + M I  D   W  L+
Sbjct: 636 VNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILL 695

Query: 561 SAYAQHG 567
           S    HG
Sbjct: 696 SGCNIHG 702



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 239/524 (45%), Gaps = 24/524 (4%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q ++L  KSGF+    + + ++  +   G+   A +   +      D +S+N ++ G A 
Sbjct: 41  QSYALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTP--YPDTVSWNSLISGYAR 98

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA 328
             +       F  +  + L P E +  S++  C         H   +K G      VS  
Sbjct: 99  FRQPGPVFDLFNGLRRSGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVS-G 157

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ--SVGIR 386
            +  Y+  G +D A   F      D V W  M+  +            ++EM+   +G+ 
Sbjct: 158 LLDGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLE 217

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGII--TNIQVSNALISAYAKNERIKQAYQIF 444
            +EF+  S+L +   +   E +       G++   +I ++NAL++ Y++      A ++F
Sbjct: 218 LNEFSLTSVLGALSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMF 277

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M+  ++++W   I         ++  + F  +L   +  +EY L   LS+      L+
Sbjct: 278 DEMTEPDVVSWTERIGAAY---DAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLK 334

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+QI G   K   +   S+ NA+I +Y KCG++  +  +F+ M+  D++SWN+LI+ YA
Sbjct: 335 SGRQIQGLCQKAGYLLVASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYA 394

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           ++G  K+A+  F  M+D   ++P++ T  ++L   +++   +   +I   +V   GFI  
Sbjct: 395 ENGLMKQALKVFSQMRDY-LLQPNKYTLASILEVAANSNFPEQAMQIHSYIVK-LGFIVD 452

Query: 625 EDHLSCMLDLLGRAGYLDEAERV------INSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +  LSC++   G+   + E++RV      IN  H+ A +     + + C A   L+L + 
Sbjct: 453 DSMLSCLITAYGKCNMICESKRVYSDISQINVLHLNAMAAT--LVHAGCHADA-LKLFQ- 508

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
             G  L +E D  ++ ++L    A   L E   NI  +  ++G+
Sbjct: 509 -TGWRLHQEVDCITLSIVLKACGALTDL-EYGRNIHSMALKSGM 550



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 209/456 (45%), Gaps = 32/456 (7%)

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           M GLA+     +AL   + +++  L P  L      ++ L P +  Q +A  +KSGF   
Sbjct: 1   MKGLATH---SDALQSIKTLVLKRLYPQAL---RASASLLHPPLTDQSYALFLKSGFALD 54

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             +S+  +  ++  G    A          D VSWN++IS YA+          +  ++ 
Sbjct: 55  AFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLRR 114

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
            G+ PDEF+  SL+   G +E  E+ H      G++    VS  L+  YAK   +  A +
Sbjct: 115 SGLSPDEFSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVS-GLLDGYAKLGDVDSAEK 173

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL--LMSELRPDEYTLSVALSSCARI 500
            F      + + W  ++ GF+ NG   +G + F E+  L   L  +E++L+  L +   +
Sbjct: 174 CFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGA---L 230

Query: 501 SSLRHGKQIHGYVLKNNLISKMS--LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           S +R G+Q+ G  +K  L+   S  L NA++ +Y++CG    ++++F+ M E D +SW  
Sbjct: 231 SDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTE 290

Query: 559 LISAYAQHGEGKEAVSCFKAMQDV--GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            I      G   +A+  F+  + V  G ++ ++     VLSA     L+  G +I   + 
Sbjct: 291 RI------GAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQI-QGLC 343

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
              G++      + ++ + G+ G +  A R I  + +   S +W +L +  A +G ++  
Sbjct: 344 QKAGYLLVASVNNALIFMYGKCGEM-VAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQA 402

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
             +   + +        Y+L  N Y  A + E AAN
Sbjct: 403 LKVFSQMRD--------YLLQPNKYTLASILEVAAN 430



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 203/476 (42%), Gaps = 48/476 (10%)

Query: 33  RSGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           R G   DA+  F   ++  S  ++ + Y L   L+A    +    G Q+     +AG   
Sbjct: 291 RIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLL 350

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V N ++ +Y    ++V+ + +F E+   D  SW + ++                   
Sbjct: 351 VASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIA------------------- 391

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQ 209
                       G  ENG     + +F +M    ++ + Y+ AS+L V  ++   E   Q
Sbjct: 392 ------------GYAENGLMKQALKVFSQMRDYLLQPNKYTLASILEVAANSNFPEQAMQ 439

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +HS + K GF    S+++ LIT Y  C  + ++ +V+ +       H+  N M   L   
Sbjct: 440 IHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVLHL--NAMAATLVHA 497

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVS 326
           G   +AL  F+           +T   V+ AC        G  +H+ A+KSG      V 
Sbjct: 498 GCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDLEYGRNIHSMALKSGMSQDNFVE 557

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A I +Y  CG +DEA   F  + + ++V+WN M+  YAQ          + +M  +GI+
Sbjct: 558 SAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEVFELFNKMLELGIQ 617

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVF----INGIITNIQVSNALISAYAKNERIKQAYQ 442
           PDE T+  +L S     +V   H ++     ++G++  ++    +I  + +   ++ A +
Sbjct: 618 PDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKR 677

Query: 443 IFHNMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
               M   P   I W  L++G  ++G    G     +L+  EL+P+  +  V LS+
Sbjct: 678 TIDQMPIMPDAQI-WQILLSGCNIHGNVDLGEVAAKKLI--ELQPENDSAYVLLSN 730



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 35/278 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  + +G  + AL +F Q+   + L+P+ Y+L++ L   AN        Q+H+Y +
Sbjct: 387 NSLIAGYAENGLMKQALKVFSQMRD-YLLQPNKYTLASILEVAANSNFPEQAMQIHSYIV 445

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G      + + +++ Y     +   KRV+S+I   +V              H+     
Sbjct: 446 KLGFIVDDSMLSCLITAYGKCNMICESKRVYSDISQINVL-------------HL----- 487

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
                        NAM       G     + LF+   +L    D  + + VL  C A   
Sbjct: 488 -------------NAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTD 534

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE+GR +HS+  KSG S    V +A+I +Y  CG V +A K F        + +++N M+
Sbjct: 535 LEYGRNIHSMALKSGMSQDNFVESAVIDVYCKCGTVDEAAKTFMNVSKN--NLVAWNAMV 592

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            G A  G   E    F  ML   ++P E+T++ V+++C
Sbjct: 593 MGYAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSC 630



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 36/238 (15%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S+ S+  +L LN   A L  +G + DAL LF      H+ + D  +LS  L AC  L + 
Sbjct: 477 SDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQ-EVDCITLSIVLKACGALTDL 535

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            +G  +H+ AL++G+     V + ++ +Y                               
Sbjct: 536 EYGRNIHSMALKSGMSQDNFVESAVIDVY------------------------------- 564

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSF 192
            K G VD A + F  +   +L  +NAM+ G  ++G Y ++   LF +M +L ++ D  ++
Sbjct: 565 CKCGTVDEAAKTFMNVSKNNLVAWNAMVMGYAQHGCYHEV-FELFNKMLELGIQPDEITY 623

Query: 193 ASVL-SVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
             VL S C AGL+ E    L S++   G    +     +I ++   G + DA +  ++
Sbjct: 624 LGVLNSCCHAGLVNEAHTYLSSMLELHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQ 681


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 184/516 (35%), Positives = 281/516 (54%), Gaps = 40/516 (7%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVS-VMSA-CLCPR-VGYQ 309
           D +SYN ++ G +  G   +A+  +  +L A  S+RPS +T  + VM+A  L  R +G Q
Sbjct: 102 DIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQ 161

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSS-------------------------------CGK 338
            H Q ++ GF A   V +  + MY+                                C  
Sbjct: 162 FHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKM 221

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           ++EA  +F  + ++D ++W TM++ + Q  L   A+  +  M+  GI  D++TFGS+L +
Sbjct: 222 VEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTA 281

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            G +  +E    IHA++       N+ V +AL+  Y+K   IK A  +F  M+ +NII+W
Sbjct: 282 CGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISW 341

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             LI G+  NG   + ++ FSE+    + PD+YTL   +SSCA ++SL  G Q H   L 
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALV 401

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           + L+  +++ NA++TLY KCG ++ + R+F+ M   D +SW AL+S YAQ G  KE +  
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDL 461

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F+ M   G +KPD  TF  VLSACS AG V+ G   F SM  D+G +P +DH +CM+DL 
Sbjct: 462 FEKMLAKG-VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLY 520

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
            R+G L EAE  I    +   +  W  L SAC   G++ +G+  A  LLE +   P+ YV
Sbjct: 521 SRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYV 580

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LL +++AA G W E A +R  ++   V K+PGCSWI
Sbjct: 581 LLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWI 616



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 233/464 (50%), Gaps = 14/464 (3%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRN 72
           ++ ++  ++  N  +A  S  G +  A+ +++ +  +   ++P   ++ST + A + L +
Sbjct: 96  ASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGD 155

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
            A G Q H   LR G  A   V + ++ +Y     +   KR F E+ + +V  + T ++ 
Sbjct: 156 RALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITG 215

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
             +   V+ A  +F+ M DRD   +  M+TG T+NG E   + +FR M    +  D Y+F
Sbjct: 216 LLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTF 275

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            S+L+ C A   LE G+Q+H+ + ++ +   V V +AL+ MY  C ++  A  VF     
Sbjct: 276 GSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRR--- 332

Query: 252 YVCDH-ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
             C + IS+  ++ G    G  EEA+  F +M    + P + T  SV+S+C        G
Sbjct: 333 MTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEG 392

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q H  A+ SG   Y +VSNA +T+Y  CG I++A  +F  +   D VSW  ++S YAQ 
Sbjct: 393 AQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQF 452

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQV 423
              +  I  + +M + G++PD  TF  +L++   +GF+E      H+    +GI+     
Sbjct: 453 GRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDH 512

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
              +I  Y+++ ++K+A +    M    + I W TL++   L G
Sbjct: 513 YTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 241/531 (45%), Gaps = 41/531 (7%)

Query: 79  LHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           LH   LR      P ++ N +L+ Y  A      +RVF  + +P+++++   LS      
Sbjct: 27  LHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHAR 86

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFASV 195
            +     +F  M  RD+  YNA+I G +  G     + ++  + + D  VR    + +++
Sbjct: 87  LLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTM 146

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA------------ 242
           +    A G    G+Q H  + + GF     V + L+ MY     V DA            
Sbjct: 147 VMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNV 206

Query: 243 ------------CKVFEEAKGYV-----CDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                       CK+ EEA+         D I++  M+ G    G   EAL  FR M   
Sbjct: 207 VMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQ 266

Query: 286 SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            +   + TF S+++AC        G Q+HA  +++ ++    V +A + MYS C  I  A
Sbjct: 267 GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLA 326

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
             +F R+  K+I+SW  +I  Y Q      A+  + EMQ  GI PD++T GS+++S   +
Sbjct: 327 ETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANL 386

Query: 403 EMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
             +E     H    ++G++  I VSNAL++ Y K   I+ A+++F  MS  + ++W  L+
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 446

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNL 518
           +G+   G   + +  F ++L   ++PD  T    LS+C+R   +  G+   H     + +
Sbjct: 447 SGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506

Query: 519 ISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +        MI LY++ G L +    +  M +  D I W  L+SA    G+
Sbjct: 507 VPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 177/368 (48%), Gaps = 43/368 (11%)

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLLASS--- 399
           +FA + ++DIVS+N +I+ ++       A+  YL +      +RP   T  +++ ++   
Sbjct: 94  LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASAL 153

Query: 400 GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN------------------------- 434
           G   + +  H  +   G   N  V + L+  YAK                          
Sbjct: 154 GDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMI 213

Query: 435 ------ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
                 + +++A ++F  M+ R+ ITW T++ GF  NG   + L+ F  +    +  D+Y
Sbjct: 214 TGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQY 273

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T    L++C  +S+L  GKQIH Y+++      + +G+A++ +Y+KC  +  +  VF  M
Sbjct: 274 TFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRM 333

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             K+ ISW ALI  Y Q+G  +EAV  F  MQ  G I PD  T  +V+S+C++   +++G
Sbjct: 334 TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG-IDPDDYTLGSVISSCANLASLEEG 392

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN--SQHIQARSDNWWALFSA 666
            + F  +    G +      + ++ L G+ G +++A R+ +  S H Q    +W AL S 
Sbjct: 393 AQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV---SWTALVSG 448

Query: 667 CAAHGNLR 674
            A  G  +
Sbjct: 449 YAQFGRAK 456


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  328 bits (840), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 197/581 (33%), Positives = 310/581 (53%), Gaps = 42/581 (7%)

Query: 191 SFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--- 246
           SF  +L  C A   L  G+ LH++  KS       + N  I +Y  C  +  A   F   
Sbjct: 10  SFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQT 69

Query: 247 ----------------EEAKGYVCDH----------ISYNVMMDGLASVGRVEEALIRFR 280
                           +E+  +V  H          +S+N +++  A  G    AL  F 
Sbjct: 70  HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129

Query: 281 DMLVASLRPSELTFVSVMSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           +M    L     TF  V++AC C  VG   Q+H+ A  SGF++Y SV N+ +T YS  G 
Sbjct: 130 EMREMGLVMDGFTFSGVITAC-CNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGI 188

Query: 339 IDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           ++EA M+F  + E  +D VSWN+MI  Y Q   G  A+  Y +M   G   D FT  S+L
Sbjct: 189 LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248

Query: 397 ASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNI 452
            +   +E +      HA     G   N  V + LI  YAK    + ++ ++F  +   ++
Sbjct: 249 TTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDL 308

Query: 453 ITWNTLINGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           + WNT+I+G+  N    V+ L+ F ++  +   PD+ +   A+S+C+ +SS   GKQ H 
Sbjct: 309 VVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHA 368

Query: 512 YVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             +K+ + S ++S+ NA++T+Y+KCG+L  + ++F  M + +T++ N++I+ YAQHG G 
Sbjct: 369 LAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGT 428

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           E+++ F+ M     I P   T  ++LSAC+H G V++G + F+ M + +G  P  +H SC
Sbjct: 429 ESLNLFEQML-AASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSC 487

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLLGRAG L EAER+I++      S  W AL  AC  +GN+ L    A   L+ E   
Sbjct: 488 MIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTN 547

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              Y++L+++Y+AA  WEEAA IR+L++  G+ K+PGCSWI
Sbjct: 548 AVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWI 588



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 160/570 (28%), Positives = 277/570 (48%), Gaps = 22/570 (3%)

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           + S    L +C   ++   G  LH   L++ + +  +++N  + LY     L +    F+
Sbjct: 8   LQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFN 67

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           +   P+V+S+   ++A  K   +  A  +FD++P  DL  +N +I    + G     + L
Sbjct: 68  QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127

Query: 177 FREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           F EM ++ +  D ++F+ V++ C    GL+   RQLHSL   SGF   VSV N+L+T Y 
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLTYYS 184

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G + +A  VF      V D +S+N M+       R  +AL  +RDM+         T 
Sbjct: 185 KNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTL 244

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK-IDEACMIFARLQ 350
            SV++   C      G Q HA+A+K+GF     V +  I MY+ CG  + E+  +F  + 
Sbjct: 245 ASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEIC 304

Query: 351 EKDIVSWNTMISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVE 406
             D+V WNTMIS Y+Q + L   A+  + +MQ  G  PD+ +F   +++   +      +
Sbjct: 305 GSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGK 364

Query: 407 MIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             HA    + I +N I V+NAL++ Y+K   ++ A ++F  M   N +T N++I G+  +
Sbjct: 365 QFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQH 424

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN--NLISKMS 523
           G   + L  F ++L + + P   TL   LS+CA    +  GK+    ++K+   +  +  
Sbjct: 425 GIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFN-MMKDIFGIEPEAE 483

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
             + MI L  + G L  + R+ + M     + +W AL+ A  ++G  + A    KA    
Sbjct: 484 HYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAE---KAANQF 540

Query: 583 GRIKPDQAT-FTAVLSACSHAGLVDDGTRI 611
            +++P  A  +  + S  S A   ++  RI
Sbjct: 541 LQLEPTNAVPYIMLASMYSAARKWEEAARI 570



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 45/269 (16%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y+D +H   +I        D+++L++ L   + + + + G Q HA A++ G     HV +
Sbjct: 229 YRDMVHRGFEI--------DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGS 280

Query: 97  TILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
            ++ +Y K    +   ++VF EI   D+  W                             
Sbjct: 281 GLIDMYAKCGAGMSESRKVFEEICGSDLVVW----------------------------- 311

Query: 156 VYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
             N MI+G ++N    +  +  FR+M +     D+ SF   +S C +      G+Q H+L
Sbjct: 312 --NTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHAL 369

Query: 214 VTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
             KS   S  +SV NAL+TMY  CGN+ DA K+F+    +  + ++ N ++ G A  G  
Sbjct: 370 AMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQH--NTVTLNSIIAGYAQHGIG 427

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC 301
            E+L  F  ML AS+ P+ +T VS++SAC
Sbjct: 428 TESLNLFEQMLAASIAPTSITLVSILSAC 456


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  328 bits (840), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 214/714 (29%), Positives = 362/714 (50%), Gaps = 84/714 (11%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + PD ++    L A A +++   G QLHA+  + G      V N+++++Y    D+ + +
Sbjct: 81  VPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAAR 140

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF EI N D  SW + ++A         AC  F++                      ++
Sbjct: 141 RVFDEITNRDDVSWNSMINA---------ACR-FEEW---------------------EL 169

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCD---AGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            + LFR M   +V   +++  SV   C     GLL  G+Q+H+ V ++G        NAL
Sbjct: 170 AVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNG-DWRTFTNNAL 227

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +TMY   G V +A  +F+       D +S+N ++  L+   R EEAL+    ML + +RP
Sbjct: 228 VTMYAKLGRVYEAKTLFDVFDDK--DLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRP 285

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQA-MKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           + +T  SV+ AC    +   G ++HA   M +     + V  A + MY +C + ++  ++
Sbjct: 286 NGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLV 345

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS----SG 400
           F  +  + I  WN MI+ Y +      AI  ++EM   +G+ P+  T  S+L +      
Sbjct: 346 FDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCES 405

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           F++  E IH+ V   G   +  V NAL+  Y++  RI+ A  IF +M+ ++I++WNT+I 
Sbjct: 406 FLDK-EGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMIT 464

Query: 461 GFLLNGFPVQGLQHFSELLMSE------------------LRPDEYTLSVALSSCARISS 502
           G+++ G     L    ++   +                  L+P+  TL   L  CA +++
Sbjct: 465 GYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAA 524

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK+IH Y +K  L   +++G+A++ +YAKCG L+ S  VF  M  ++ I+WN LI A
Sbjct: 525 LGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMA 584

Query: 563 YAQHGEGKEAVSCFKAMQDVG----RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           Y  HG+G+EA+  F+ M + G     I+P++ T+ A+ ++ SH+G+VD+G  +F +M   
Sbjct: 585 YGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAK 644

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLRLGR 677
           +G  P  DH +C++DLLGR+G ++EA  +I +     +  D W +L  AC  H NL +G 
Sbjct: 645 HGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGE 704

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           I A           +++VL  N+        + + +   +K  GV K+PGCSWI
Sbjct: 705 IAA----------KNLFVLDPNVLDYG---TKQSMLGRKMKEKGVRKEPGCSWI 745



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 166/582 (28%), Positives = 281/582 (48%), Gaps = 44/582 (7%)

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALI 230
            I  +  M    V  DN++F +VL    AG+  L  G+QLH+ V K G +   +V N+L+
Sbjct: 69  AISTYTNMVTAGVPPDNFAFPAVLKAT-AGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY  CG++  A +VF+E      D +S+N M++        E A+  FR ML+ ++ P+
Sbjct: 128 NMYGKCGDIDAARRVFDEITNR--DDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185

Query: 291 ELTFVSVMSACL----CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
             T VSV  AC        +G QVHA  +++G +  T  +NA +TMY+  G++ EA  +F
Sbjct: 186 SFTLVSVAHACSNLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLF 244

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV- 405
               +KD+VSWNT+IS+ +Q +    A+L    M   G+RP+  T  S+L +   +EM+ 
Sbjct: 245 DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLG 304

Query: 406 --EMIHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
             + IHAFV +N  +I N  V  AL+  Y   ++ ++   +F  M  R I  WN +I G+
Sbjct: 305 CGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGY 364

Query: 463 LLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           + N F  + ++ F E++    L P+  TLS  L +C R  S    + IH  V+K      
Sbjct: 365 VRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKD 424

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA---------------QH 566
             + NA++ +Y++ G ++ +  +F  M  KD +SWN +I+ Y                Q 
Sbjct: 425 KYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQR 484

Query: 567 GEGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           G+ +  ++ F   +D     +KP+  T   VL  C+    +  G  I    V     + +
Sbjct: 485 GQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQ---MLS 541

Query: 625 EDHL--SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN----LRLGRI 678
           +D    S ++D+  + G L+ +  V     ++     W  L  A   HG     L+L R 
Sbjct: 542 KDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRR 600

Query: 679 IAGLLLEREQDKPS--VYVLLSNIYAAAGLWEEAANIRELLK 718
           +        + +P+   Y+ +    + +G+ +E  N+   +K
Sbjct: 601 MVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMK 642



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 189/385 (49%), Gaps = 10/385 (2%)

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAI 330
           +A+  + +M+ A + P    F +V+ A    +   +G Q+HA   K G    T+V N+ +
Sbjct: 68  QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY  CG ID A  +F  +  +D VSWN+MI+   +      A+  +  M    + P  F
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187

Query: 391 TFGSLL-ASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           T  S+  A S  I    + + +HAFV  NG       +NAL++ YAK  R+ +A  +F  
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF-TNNALVTMYAKLGRVYEAKTLFDV 246

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
              +++++WNT+I+    N    + L +   +L S +RP+  TL+  L +C+ +  L  G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306

Query: 507 KQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           K+IH +VL NN LI    +G A++ +Y  C   +    VF+ M  +    WNA+I+ Y +
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           +    EA+  F  M     + P+  T ++VL AC       D   I   +V  +GF   +
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVK-WGFEKDK 425

Query: 626 DHLSCMLDLLGRAGYLDEAERVINS 650
              + ++D+  R G ++ A  +  S
Sbjct: 426 YVQNALMDMYSRMGRIEIARSIFGS 450



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 215/476 (45%), Gaps = 73/476 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +++LS++  +++AL L++ +     ++P+  +L++ L AC++L     G ++H
Sbjct: 252 LVSWNTIISSLSQNDRFEEAL-LYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIH 310

Query: 81  AYAL-RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           A+ L    L     V   ++ +Y N +                            + G +
Sbjct: 311 AFVLMNNDLIENSFVGCALVDMYCNCKQ--------------------------PEKGRL 344

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSV 198
                VFD M  R + V+NAMI G   N ++   I LF EM  +L +  ++ + +SVL  
Sbjct: 345 -----VFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA 399

Query: 199 ---CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              C++ L + G  +HS V K GF     V NAL+ MY   G +  A  +F        D
Sbjct: 400 CVRCESFLDKEG--IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRK--D 455

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVA------------------SLRPSELTFVSV 297
            +S+N M+ G    GR ++AL    DM                      L+P+ +T ++V
Sbjct: 456 IVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTV 515

Query: 298 MSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +  C        G ++HA A+K       +V +A + MY+ CG ++ +  +F ++  +++
Sbjct: 516 LPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNV 575

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVG-----IRPDEFTFGSLLAS---SGFI-EMV 405
           ++WN +I  Y     G  A+  +  M   G     IRP+E T+ ++ AS   SG + E +
Sbjct: 576 ITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGL 635

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLI 459
            + +     +GI         L+    ++ +I++AY +   M    + +  W++L+
Sbjct: 636 NLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691


>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
          Length = 788

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/708 (28%), Positives = 360/708 (50%), Gaps = 76/708 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++    ++ PD + +     AC  L+   FG  +H Y  ++GL    
Sbjct: 106 RMGLVEGALMGFVEMLKD-EIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCV 164

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD++P+R
Sbjct: 165 FVASSLADMY-------------------------------GKCGVLDDARKVFDEIPER 193

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           ++  +NA++ G  +NG  +  I L  +M +  V     + ++ LS   + G +E G+Q H
Sbjct: 194 NVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSH 253

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           +L   +G      +  +++  Y   G V  A  VF+   G   D +++N+++ G    G 
Sbjct: 254 ALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGK--DVVTWNLLISGYVQQGL 311

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
           VE+A+   + M +  L+   +T  ++MS        ++G +V    ++  FE+   +++ 
Sbjct: 312 VEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLAST 371

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           A+ MY+ CG I +A  +F    +KD++ WNT+++ YA+  L   A+  + EMQ   + P+
Sbjct: 372 AVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPN 431

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             T+                                N +I +  +N ++ +A ++F  M 
Sbjct: 432 VITW--------------------------------NLIILSLLRNGQVDEAKKMFLQMQ 459

Query: 449 PR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                  I++W T++NG + NG   + + +  ++    +RP+ ++++VALS+CA ++SL 
Sbjct: 460 SSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLH 519

Query: 505 HGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            G+ +HGY+++N L  S +S+  +++ +YAKCGD+  + +VF   +  +   +NA+ISAY
Sbjct: 520 FGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAY 579

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A +G  +EA++ ++++ D+G IKPD  TFT +LSAC+HAG ++    IF  MV+ +G  P
Sbjct: 580 ALYGNVEEAMALYRSLDDMG-IKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKP 638

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H   M+DLL  AG  ++A R++     +  +    +L + C       L   ++  L
Sbjct: 639 CLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQL 698

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LE E D    YV +SN YA  G W+E   +RE++K  G+ KQPGCSWI
Sbjct: 699 LESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPGCSWI 746



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 200/414 (48%), Gaps = 11/414 (2%)

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG--FE 320
           L   G ++EAL    +M   ++R     +  ++  C+  R    G Q+HA+ +K+G  + 
Sbjct: 1   LCKNGEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYA 60

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +    +  Y+ C  ++ A ++F++L+ +++ SW  +I    +  L   A++ ++EM
Sbjct: 61  KNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEM 120

Query: 381 QSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               I PD F   ++  + G ++       +H +V  +G+   + V+++L   Y K   +
Sbjct: 121 LKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVL 180

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F  +  RN++ WN L+ G++ NG   + ++   ++    + P   T+S  LS+ 
Sbjct: 181 DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSAS 240

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A +  +  GKQ H   + N L     LG +++  Y K G ++ +  VF+ M+ KD ++WN
Sbjct: 241 ANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWN 300

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LIS Y Q G  ++A+   K M+ + ++K D  T + ++S  +       G  +    + 
Sbjct: 301 LLISGYVQQGLVEDAIRMCKLMR-LEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIR 359

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            + F       S  +D+  + G + +A++V +S  +Q     W  L +A A  G
Sbjct: 360 -HSFESDIVLASTAVDMYAKCGSIVDAKKVFDST-VQKDLILWNTLLAAYAESG 411



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/448 (22%), Positives = 189/448 (42%), Gaps = 75/448 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+ +  ++    KLK D  +LST ++  A  +N+  G ++  Y +
Sbjct: 300 NLLISGYVQQGLVEDAIRM-CKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCI 358

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   ++   +A+T + +Y     +V  K+VF      D+  W T L+A  + G    A  
Sbjct: 359 RHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALR 418

Query: 145 VFDKMPDRDLPV---------------------------------------YNAMITGCT 165
           +F +M    +P                                        +  M+ G  
Sbjct: 419 LFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQMQSSGIVPTIVSWTTMMNGLV 478

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLV 223
           +NG  +  I   R+M +  +R + +S    LS C +   L FGR +H  + ++   S  V
Sbjct: 479 QNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSV 538

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A KVF   +    +   YN M+   A  G VEEA+  +R + 
Sbjct: 539 SIETSLVDMYAKCGDISKAEKVFR--RKLFSELPLYNAMISAYALYGNVEEAMALYRSLD 596

Query: 284 VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AIT 331
              ++P  +TF +++SAC         HA  +    E ++ + +              + 
Sbjct: 597 DMGIKPDNITFTNILSAC--------NHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVD 648

Query: 332 MYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE- 389
           + +S G+ ++A  +   +  E D     ++++T  + +  ++ ++ YL  Q +   PD  
Sbjct: 649 LLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEH--KTELVEYLSKQLLESEPDNS 706

Query: 390 ---FTFGSLLASSG----FIEMVEMIHA 410
               T  +  A  G     ++M EM+ A
Sbjct: 707 GNYVTISNAYAVEGSWDEVVKMREMMKA 734


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/600 (30%), Positives = 323/600 (53%), Gaps = 10/600 (1%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y  T  +    K+G   +A ++F+ +P  D+  +N +I G +++G+    + LF  M +
Sbjct: 78  LYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLR 137

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
              R +  + AS+L  C    L   GR +H+   K+G      + NAL +MY  C ++  
Sbjct: 138 ESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEA 197

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  +F+E      + IS+N M+      G  ++A++ F++ML    +PS +T +++MSA 
Sbjct: 198 SQLLFQEMGEK--NVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSAN 255

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
             P     VH   +K GF    SV  + + +Y+  G  D A +++     KD++S   +I
Sbjct: 256 AVPET---VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGII 312

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII 418
           S+Y+++    SA+  +++   + I+PD     S+L   +      +    H +   NG+ 
Sbjct: 313 SSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLT 372

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +  V+N LIS Y++ + I  A  +F + S + +ITWN++I+G +  G     ++ F ++
Sbjct: 373 NDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQM 432

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
            M   +PD  T++  LS C ++  LR G+ +HGY+L+NN+  +   G A+I +Y KCG L
Sbjct: 433 NMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRL 492

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D + ++F  + +   ++WN++IS Y+ +G   +A  CF  +Q+ G ++PD+ TF  VL+A
Sbjct: 493 DYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQG-LEPDKITFLGVLAA 551

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GLV  G   F  M  +YG +P   H +C++ LLGRAG   EA  +IN+  I+  S 
Sbjct: 552 CTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSA 611

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W AL SAC     ++LG  +A  L          YV LSN+YA  G W++ A +R++++
Sbjct: 612 VWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDVARVRDMMR 671



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 219/446 (49%), Gaps = 12/446 (2%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+ + + K G    + V  ALI  Y   G    A ++FE+      D +S+NV++ G + 
Sbjct: 64  QIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPS--ADVVSWNVLICGYSQ 121

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
            G   +AL  F  ML  S RP++ T  S++ +C    +   G  VHA  +K+G      +
Sbjct: 122 HGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQL 181

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA  +MY+ C  ++ + ++F  + EK+++SWNTMI  Y Q      A+L + EM   G 
Sbjct: 182 SNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGW 241

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           +P   T  +L++++    + E +H ++   G   +  V  +L+  YAK      A  ++ 
Sbjct: 242 QPSPVTMMNLMSANA---VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYE 298

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               +++I+   +I+ +   G     ++ F + L  +++PD   L   L   +  S    
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAI 358

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G   HGY LKN L +   + N +I+ Y++  ++  +L +F    EK  I+WN++IS   Q
Sbjct: 359 GCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQ 418

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G+  +A+  F  M   G+ KPD  T  ++LS C   G +  G  +   ++ +   +  E
Sbjct: 419 AGKSSDAMELFCQMNMCGQ-KPDAITIASLLSGCCQLGYLRIGETLHGYILRNN--VKVE 475

Query: 626 DHL-SCMLDLLGRAGYLDEAERVINS 650
           D   + ++D+  + G LD AE++  S
Sbjct: 476 DFTGTALIDMYTKCGRLDYAEKIFYS 501



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 242/546 (44%), Gaps = 47/546 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   S+ GH  DAL LFV +      +P+  ++++ L +C        G  +HA+ +
Sbjct: 113 NVLICGYSQHGHPHDALQLFVHM-LRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGI 171

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +AGL   P ++N + S+Y    DL + + +F E+   +V SW                  
Sbjct: 172 KAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISW------------------ 213

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                        N MI    +NG+ED  +  F+EM K   +    +  +++S       
Sbjct: 214 -------------NTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANAV--- 257

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
                +H  + K GF+   SVV +L+ +Y   G   D  K+  E      D IS   ++ 
Sbjct: 258 --PETVHCYIIKCGFTGDASVVTSLVCLYAKQG-FTDMAKLLYECYP-TKDLISLTGIIS 313

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
             +  G VE A+  F   L   ++P  +  +SV+     P    +G   H   +K+G   
Sbjct: 314 SYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTN 373

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V+N  I+ YS   +I  A  +F    EK +++WN+MIS   Q      A+  + +M 
Sbjct: 374 DCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMN 433

Query: 382 SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G +PD  T  SLL+     G++ + E +H ++  N +        ALI  Y K  R+ 
Sbjct: 434 MCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLD 493

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A +IF++++   ++TWN++I+G+ L G   +    FS+L    L PD+ T    L++C 
Sbjct: 494 YAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACT 553

Query: 499 RISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISW 556
               +  G +    + K   L+  +     ++ L  + G    ++ +  NM I  D+  W
Sbjct: 554 HGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVW 613

Query: 557 NALISA 562
            AL+SA
Sbjct: 614 GALLSA 619



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 166/341 (48%), Gaps = 22/341 (6%)

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLC---------PRVGYQV---HAQAMKSGFEAY 322
           AL+ FR +L +S  P+ LTF  ++ ACL          P    QV     Q +K G + +
Sbjct: 18  ALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQF 77

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+ A I  Y   G    A  +F  L   D+VSWN +I  Y+Q      A+  ++ M  
Sbjct: 78  LYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLR 137

Query: 383 VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
              RP++ T  SLL S G  E+      +HAF    G+  + Q+SNAL S YAK + ++ 
Sbjct: 138 ESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEA 197

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           +  +F  M  +N+I+WNT+I  +  NGF  + +  F E+L    +P   T+   +S+ A 
Sbjct: 198 SQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSANAV 257

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
             +      +H Y++K       S+  +++ LYAK G  D +  ++     KD IS   +
Sbjct: 258 PET------VHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGI 311

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           IS+Y++ GE + AV CF     +  IKPD     +VL   S
Sbjct: 312 ISSYSEKGEVESAVECFIQTLKL-DIKPDAVALISVLHGIS 351



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 120/240 (50%), Gaps = 15/240 (6%)

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS-------------SGFIEMVEMIHAFVFINGII 418
           SA+L + ++      P+  TF  L+ +             + +++ V  I   +   GI 
Sbjct: 17  SALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQ-VNQIQTQLLKRGID 75

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
             + V+ ALI  Y K      A Q+F ++   ++++WN LI G+  +G P   LQ F  +
Sbjct: 76  QFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHM 135

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L    RP++ T++  L SC R      G+ +H + +K  L     L NA+ ++YAKC DL
Sbjct: 136 LRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDL 195

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + S  +F  M EK+ ISWN +I AY Q+G   +AV CFK M   G  +P   T   ++SA
Sbjct: 196 EASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGW-QPSPVTMMNLMSA 254



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 35/282 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+ L   +++ S  G  + A+  F+Q      +KPD  +L + L   ++  + A G   H
Sbjct: 305 LISLTGIISSYSEKGEVESAVECFIQTLKL-DIKPDAVALISVLHGISDPSHFAIGCAFH 363

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y L+ GL     VAN ++S Y    ++++   +F +     + +W + +S C + G   
Sbjct: 364 GYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSS 423

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VC 199
            A E+F +M              C +                   + D  + AS+LS  C
Sbjct: 424 DAMELFCQM------------NMCGQ-------------------KPDAITIASLLSGCC 452

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L  G  LH  + ++          ALI MY  CG +  A K+F          +++
Sbjct: 453 QLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCL--VTW 510

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           N ++ G +  G   +A   F  +    L P ++TF+ V++AC
Sbjct: 511 NSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAAC 552



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 5/182 (2%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
            I A ++   + S++ L+  N  ++   ++G   DA+ LF Q++   + KPD  ++++ L
Sbjct: 390 EILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQ-KPDAITIASLL 448

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           + C  L     G  LH Y LR  +K        ++ +Y     L   +++F  I +P + 
Sbjct: 449 SGCCQLGYLRIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLV 508

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
           +W + +S  +  G    A   F K+ ++ L      +  ++  CT  G    G+  FR M
Sbjct: 509 TWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIM 568

Query: 181 HK 182
            K
Sbjct: 569 RK 570


>gi|357131661|ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Brachypodium distachyon]
          Length = 924

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 201/610 (32%), Positives = 331/610 (54%), Gaps = 18/610 (2%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G  + A +VF ++  ++   +N MI G  EN      + +FREM   + + D  +  +
Sbjct: 321 EFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREMLS-ECQPDFATLVA 379

Query: 195 VLSVC-DAGLLEFGRQLHSLVT-KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           V+  C D GLL  G+ +H  +T K  F    S+ N+L+ +Y  C +   A  +F      
Sbjct: 380 VILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMP-- 437

Query: 253 VCDHISYNVMMDGLASVGRV-EEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGY 308
           + D IS+N M+ G +    + EEA   FR++L   L  +  T ++V+ +C CP   R G 
Sbjct: 438 IRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGK 497

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQR 367
            VH+  +K GF +  SV NA + MY  CG    A  +   +    DI+SWNT +    Q 
Sbjct: 498 AVHSFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVGCVQN 557

Query: 368 NLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
            L R A+ A+  M S + + PD  T  S+L++ G +++  +   IH+      ++ N++V
Sbjct: 558 GLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRV 617

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            NAL++ Y +    + A  IF+++  RN+ +WN +++GF  N    + LQ + +  M + 
Sbjct: 618 KNALLTMYFRFADTESAELIFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQK--MEKF 675

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P+E      + +C ++  +RHGK IHG+V+K++L + + L  +++ +Y+KCG LD ++R
Sbjct: 676 VPNEMCTVSIICACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVR 735

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF    EK    WN++ISA+  HG G  ++  F +M   G +K  ++TF A+LSACSHAG
Sbjct: 736 VFESSTEKSIACWNSMISAFGFHGHGLRSIELFCSMIHSG-MKATRSTFIALLSACSHAG 794

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN-WWA 662
           L D+G + ++ M   +G  P  +H  C++D+LGRAG L EA + + S      +   W A
Sbjct: 795 LTDEGLKYYNLMSEKFGITPTPEHHVCIVDMLGRAGRLQEAHKFVESLPKSKEAHGVWGA 854

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L SAC+    LR+G  IA  LL  E +    YV +SN+YA   +W  A  +R++L+   +
Sbjct: 855 LLSACSNKSELRMGEAIARQLLCLEPENSGYYVTISNLYAYQDMWGGAVQVRDILQDKRL 914

Query: 723 IKQPGCSWIG 732
           +K  G S +G
Sbjct: 915 MKPHGHSIVG 924



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 197/726 (27%), Positives = 338/726 (46%), Gaps = 55/726 (7%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           SG   DA    V  H +    PD+   +  + A    R    G+ +  +   AG++    
Sbjct: 113 SGGDHDARAALVLFHEAED--PDVILWNAVIGALT--RACRLGDAVALFRRMAGVRGEAF 168

Query: 94  VANTILSLYKNAR-----DL------VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            + T++ +   A      DL       +VKR      + D+  W   +    K G    +
Sbjct: 169 DSTTVVVMLSGASRAGELDLGMALHAAAVKRRL----DTDMNLWNALVDMYAKCGSFCDS 224

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-- 200
             VF  MP  D   +N++  G T NG  ++    FREM +L V+ D  + +SV+S     
Sbjct: 225 EAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYFREMIRLAVQADEVTLSSVISASSRA 284

Query: 201 AGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            GL  FG  +H  + K G+  +   SV N+LIT YF  G   DA KVF   + +  +H+S
Sbjct: 285 EGLFSFGESVHGCIVKLGYEDTAPCSVANSLITFYFEFGFPEDAEKVF--MRIFKKNHVS 342

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQ 313
           +NVM+ GL    +  EAL  FR+ML +  +P   T V+V+ +C     LC   G  +H  
Sbjct: 343 WNVMIKGLMENEKAGEALAVFREML-SECQPDFATLVAVILSCGDQGLLCE--GKAIHGY 399

Query: 314 -AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN-LGR 371
              K  F   +S+ N+ + +Y  C     A ++F  +  +D++SWNTM+S Y++ + L  
Sbjct: 400 ITRKCLFHVESSLGNSLLGLYMKCDDAYTANLLFRTMPIRDLISWNTMLSGYSRDDSLRE 459

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A   + E+ S G+     T  +++ S    E +     +H+FV   G  + + V NAL+
Sbjct: 460 EAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVHSFVLKYGFASGVSVVNALM 519

Query: 429 SAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPD 486
             Y        A+ +  ++ P  +II+WNT + G + NG     L+ F  +  S  L PD
Sbjct: 520 HMYICCGDSLVAFTLLGSIMPVSDIISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPD 579

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             TL   LS+C  +     GK IH   LK  L+  + + NA++T+Y +  D + +  +F 
Sbjct: 580 SITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFY 639

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            + +++  SWN ++S +AQ+ +G+ A+  ++ M+   +  P++    +++ AC+    V 
Sbjct: 640 SLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKME---KFVPNEMCTVSIICACTQLRDVR 696

Query: 607 DGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
            G  I   +V     +  F+ A      ++D+  + G LD A RV  S   +     W +
Sbjct: 697 HGKSIHGHVVKSDLQNNVFLSAS-----LVDMYSKCGRLDIAVRVFESS-TEKSIACWNS 750

Query: 663 LFSACAAHGN-LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL-KRT 720
           + SA   HG+ LR   +   ++    +   S ++ L +  + AGL +E      L+ ++ 
Sbjct: 751 MISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSACSHAGLTDEGLKYYNLMSEKF 810

Query: 721 GVIKQP 726
           G+   P
Sbjct: 811 GITPTP 816



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 201/439 (45%), Gaps = 22/439 (5%)

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-----ACKVFEEAKGYVC 254
           DA L      LH    KSG      V  +L+  Y  C +  D     A  +F EA+    
Sbjct: 75  DAPLAGSVESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDP-- 132

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM----SACLCPRVGYQV 310
           D I +N ++  L    R+ +A+  FR M        + T V VM    S      +G  +
Sbjct: 133 DVILWNAVIGALTRACRLGDAVALFRRMAGVRGEAFDSTTVVVMLSGASRAGELDLGMAL 192

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA A+K   +   ++ NA + MY+ CG   ++  +F  +   D  SWN++        L 
Sbjct: 193 HAAAVKRRLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLS 252

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS----GFIEMVEMIHAFVFINGI--ITNIQVS 424
             +   + EM  + ++ DE T  S++++S    G     E +H  +   G        V+
Sbjct: 253 EVSACYFREMIRLAVQADEVTLSSVISASSRAEGLFSFGESVHGCIVKLGYEDTAPCSVA 312

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+LI+ Y +    + A ++F  +  +N ++WN +I G + N    + L  F E+L SE +
Sbjct: 313 NSLITFYFEFGFPEDAEKVFMRIFKKNHVSWNVMIKGLMENEKAGEALAVFREML-SECQ 371

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLR 543
           PD  TL   + SC     L  GK IHGY+ +  L   + SLGN+++ LY KC D   +  
Sbjct: 372 PDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANL 431

Query: 544 VFNMMIEKDTISWNALISAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +F  M  +D ISWN ++S Y++     +EA + F+ +   G +     T  AV+ +CS  
Sbjct: 432 LFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFRELLSEG-LSCTMTTILAVIPSCSCP 490

Query: 603 GLVDDGTRIFDSMVNDYGF 621
             +  G  +  S V  YGF
Sbjct: 491 EDLRFGKAV-HSFVLKYGF 508



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 163/385 (42%), Gaps = 43/385 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+  SR    ++      +   S  L   + ++   + +C+   +  FG  +H
Sbjct: 441 LISWNTMLSGYSRDDSLREEAQAMFRELLSEGLSCTMTTILAVIPSCSCPEDLRFGKAVH 500

Query: 81  AYALRAGLKAYPHVANTILSLYKNARD-LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           ++ L+ G  +   V N ++ +Y    D LV+   + S +   D+ SW             
Sbjct: 501 SFVLKYGFASGVSVVNALMHMYICCGDSLVAFTLLGSIMPVSDIISW------------- 547

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSV 198
                             N  + GC +NG     +  F+ MH  L +  D+ +  SVLS 
Sbjct: 548 ------------------NTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSA 589

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDH 256
           C    L   G+ +HS+  K      + V NAL+TMYF   +   A  +F       +C  
Sbjct: 590 CGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAELIFYSLGDRNLC-- 647

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQ 313
            S+N M+ G A       AL  ++ M      P+E+  VS++ AC      R G  +H  
Sbjct: 648 -SWNCMVSGFAQNNDGRRALQFYQKM--EKFVPNEMCTVSIICACTQLRDVRHGKSIHGH 704

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +KS  +    +S + + MYS CG++D A  +F    EK I  WN+MIS +     G  +
Sbjct: 705 VVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIACWNSMISAFGFHGHGLRS 764

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLAS 398
           I  +  M   G++    TF +LL++
Sbjct: 765 IELFCSMIHSGMKATRSTFIALLSA 789



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 117/258 (45%), Gaps = 21/258 (8%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAK-----NERIKQAYQIFHNMSPRNIITWNTLI 459
           VE +H     +G + +  V  +L++AYA+     +   + A  +FH     ++I WN +I
Sbjct: 82  VESLHCAALKSGAVLDPPVRTSLLAAYARCPSGGDHDARAALVLFHEAEDPDVILWNAVI 141

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRP---DEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
                       +  F    M+ +R    D  T+ V LS  +R   L  G  +H   +K 
Sbjct: 142 GALTRACRLGDAVALFRR--MAGVRGEAFDSTTVVVMLSGASRAGELDLGMALHAAAVKR 199

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L + M+L NA++ +YAKCG    S  VF  M   DT SWN++      +G  + +   F
Sbjct: 200 RLDTDMNLWNALVDMYAKCGSFCDSEAVFWSMPCWDTASWNSVTGGSTFNGLSEVSACYF 259

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHA-GLVDDGTRIFDSMVNDYGFIPAEDHLSC----- 630
           + M  +  ++ D+ T ++V+SA S A GL   G  +   +V     +  ED   C     
Sbjct: 260 REMIRLA-VQADEVTLSSVISASSRAEGLFSFGESVHGCIVK----LGYEDTAPCSVANS 314

Query: 631 MLDLLGRAGYLDEAERVI 648
           ++      G+ ++AE+V 
Sbjct: 315 LITFYFEFGFPEDAEKVF 332



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 38/283 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N ++    ++G ++ AL  F  +HSS  L PD  +L + L+AC  L+  + G  +H
Sbjct: 544 IISWNTAVVGCVQNGLHRGALEAFQFMHSSLPLNPDSITLVSVLSACGTLKLQSLGKSIH 603

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           + AL+  L     V N +L++Y    D  S + +F        YS               
Sbjct: 604 SMALKRLLVFNLRVKNALLTMYFRFADTESAELIF--------YS--------------- 640

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                   + DR+L  +N M++G  +N      +  +++M K  V  +  + + + +   
Sbjct: 641 --------LGDRNLCSWNCMVSGFAQNNDGRRALQFYQKMEKF-VPNEMCTVSIICACTQ 691

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHIS 258
              +  G+ +H  V KS     V +  +L+ MY  CG +  A +VFE +  K   C    
Sbjct: 692 LRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRVFESSTEKSIAC---- 747

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +N M+      G    ++  F  M+ + ++ +  TF++++SAC
Sbjct: 748 WNSMISAFGFHGHGLRSIELFCSMIHSGMKATRSTFIALLSAC 790


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 200/637 (31%), Positives = 317/637 (49%), Gaps = 80/637 (12%)

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
           DR +  YNA I    + G  +  + L     K ++    YS  SVL +C  +  L  G++
Sbjct: 63  DRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYS--SVLQLCAGSKSLTDGKK 120

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE---------------------E 248
           +HS++  +  +    +   L+++Y  CG++ +  +VF+                     +
Sbjct: 121 VHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180

Query: 249 AKGYVC----------------------------DHISYNVMMDGLASVGRVEEALIRFR 280
            K  +C                            D IS+N M+ G  S G  E  L  ++
Sbjct: 181 FKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYK 240

Query: 281 DMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            M+   +     T +SV+  C       +G  VH+ A+KS FE   + SN  + MYS CG
Sbjct: 241 QMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCG 300

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL- 396
            +D A  +F ++ E+++VSW +MI+ Y +      AI    +M+  G++ D     S+L 
Sbjct: 301 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILH 360

Query: 397 --ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
             A SG ++  + +H ++  N + +N+ V NAL+  Y K   +  A  +F  M  ++II+
Sbjct: 361 ACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIIS 420

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+I                      EL+PD  T++  L +CA +S+L  GK+IHGY+L
Sbjct: 421 WNTMI---------------------GELKPDSRTMACILPACASLSALERGKEIHGYIL 459

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           +N   S   + NA++ LY KCG L  +  +F+M+  KD +SW  +IS Y  HG G EA++
Sbjct: 460 RNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIA 519

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  M+D G I+PD+ +F ++L ACSH+GL++ G R F  M ND+   P  +H +CM+DL
Sbjct: 520 TFNEMRDAG-IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDL 578

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           L R G L +A   I +  I   +  W AL   C  + ++ L   +A  + E E +    Y
Sbjct: 579 LSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYY 638

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           VLL+NIYA A  WEE   +RE + + G+ K PGCSWI
Sbjct: 639 VLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWI 675



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 274/589 (46%), Gaps = 60/589 (10%)

Query: 2   LQRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLS 61
           L  RI+AT    + T    +   N  + +  + G+ ++A+ L      S +L+   YS  
Sbjct: 50  LPIRISAT---PTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKS-ELETKTYS-- 103

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           + L  CA  ++   G ++H+      +     +   ++SLY    DL   +RVF  ++  
Sbjct: 104 SVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKK 163

Query: 122 DVYSWTTFLSACTKMGHV--------------------DYACEVFDKMPDRDLPVYNAMI 161
           +VY W   +S   K+G                      + A E+FDK+ DRD+  +N+MI
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223

Query: 162 TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFS 220
           +G   NG  + G+ ++++M  L +  D  +  SVL  C ++G L  G+ +HSL  KS F 
Sbjct: 224 SGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFE 283

Query: 221 CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFR 280
             ++  N L+ MY  CG++  A +VFE+      + +S+  M+ G    GR + A+   +
Sbjct: 284 RRINFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGRSDGAIRLLQ 341

Query: 281 DMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            M    ++   +   S++ AC        G  VH     +  E+   V NA + MY+ CG
Sbjct: 342 QMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCG 401

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL- 396
            +D A  +F+ +  KDI+SWNTMI                       ++PD  T   +L 
Sbjct: 402 SMDGANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACILP 440

Query: 397 --ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
             AS   +E  + IH ++  NG  ++  V+NAL+  Y K   +  A  +F  +  +++++
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVS 500

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W  +I+G+ ++G+  + +  F+E+  + + PDE +    L +C+    L  G +   Y++
Sbjct: 501 WTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIM 559

Query: 515 KN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
           KN  N+  K+     M+ L ++ G+L  +      + I  D   W AL+
Sbjct: 560 KNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALL 608



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 176/412 (42%), Gaps = 87/412 (21%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+ ++ + L  CAN    + G  +H+ A+++  +   + +NT+L +Y    DL    RVF
Sbjct: 250 DLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVF 309

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP------------------------- 150
            ++   +V SWT+ ++  T+ G  D A  +  +M                          
Sbjct: 310 EKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLD 369

Query: 151 --------------DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV----------R 186
                         + +L V NA++   T+ G  D    +F  M   D+          +
Sbjct: 370 NGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELK 429

Query: 187 RDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D+ + A +L  C +   LE G+++H  + ++G+S    V NAL+ +Y  CG +  A  +
Sbjct: 430 PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLL 489

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F+       D +S+ VM+ G    G   EA+  F +M  A + P E++F+S++ AC    
Sbjct: 490 FDMIPSK--DLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYAC---- 543

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTY 364
                H+  ++ G+  +  + N     ++   K++  ACM+       D++S    +S  
Sbjct: 544 ----SHSGLLEQGWRFFYIMKND----FNIEPKLEHYACMV-------DLLSRTGNLSK- 587

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVF 413
                      AY  ++++ I PD   +G+LL        IE+ E +   VF
Sbjct: 588 -----------AYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  327 bits (838), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 212/714 (29%), Positives = 365/714 (51%), Gaps = 46/714 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + + S SG++Q+AL L+ +I  S     D + L + L AC+N  +   G  +H   ++ G
Sbjct: 19  IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQG 77

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   +AN+ +  Y                                K G +D A   FD
Sbjct: 78  CQSSTSIANSTIDFY-------------------------------MKYGDLDSAQRAFD 106

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
              ++D   +N M+ G   NG    G+  F +      + +  S   V+    +  +   
Sbjct: 107 STKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQ 166

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G   H  + +SGFS ++SV N+L+++Y    ++  A K+F E      D +S++VM+ G 
Sbjct: 167 GFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEMS-VRNDVVSWSVMIGGF 224

Query: 267 ASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY 322
             +G  E+  + FR+M+  A + P  +T VSV+ AC   +   +G  VH   +  G E  
Sbjct: 225 VQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDD 284

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V N+ I MYS C  +  A   F  + EK+I+SWN M+S Y        A+     M  
Sbjct: 285 LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVR 344

Query: 383 VGIRPDEFTFGSLLA-SSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G   DE T  ++L  +  F++ ++   +H  +   G  +N  + N++I AYAK   ++ 
Sbjct: 345 EGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVEL 404

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F  M+ ++++ W+T+I GF  NG P + +  F ++   E+ P+  ++   + +CA 
Sbjct: 405 ARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAV 463

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            + LR  K  HG  ++  L S++++G ++I +Y+KCGD++ S+R FN + +K+ + W+A+
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ISA+  +G   EA+  F+ ++  G  KP+  T  ++LSACSH GL+++G   F SMV  +
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNG-TKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKH 582

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQARSDNWWALFSACAAHGNLRLGR 677
           G  P  +H SC++D+L RAG  +EA  +I    + ++A +  W  L S+C ++GN+ LG 
Sbjct: 583 GIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGS 642

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  +L+ E    + Y+L SN+YA  GL  ++A +R L K  GV    G S +
Sbjct: 643 GAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLV 696


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/514 (35%), Positives = 285/514 (55%), Gaps = 11/514 (2%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           +   LI  YF  G + +A  +F+E      D +++ VM+ G  S      A + F +M+ 
Sbjct: 45  LATTLIKSYFGKGLIGEARTLFDEMPER--DVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG-KID 340
             L P+  T  SV+ AC    C   G  VH  A+K G + +  V NA + MY++C   +D
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLAS 398
           +ACM+F  +  K+ VSW T+I+ Y  R+ G   +  + +M  + V + P  F+      +
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222

Query: 399 S-GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           S G     E +HA V  +G  +N+ V N+++  Y +     +A + F+ M+ R++ITWNT
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           LI G+  +  P + L  FS +      P+ +T +  +++CA ++ L  G+QIHG +++  
Sbjct: 283 LIAGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRG 341

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L   ++L NA+I +Y+KCG++  S +VF  M  +D +SW A++  Y  HG G+EAV  F 
Sbjct: 342 LDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFD 401

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G I+PD+  F A+LSACSHAGLVD+G R F  MV DY   P ++   C++DLLGR
Sbjct: 402 KMVRSG-IRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGR 460

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
           AG ++EA  +I S   +     W     AC AH    LG++ A  +L+        YV+L
Sbjct: 461 AGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVML 520

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNIYAA G W E A +R+L+KR G  K+ G SW+
Sbjct: 521 SNIYAADGKWGEFARLRKLMKRMGNKKETGRSWV 554



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 223/458 (48%), Gaps = 14/458 (3%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           + P V + TT + +    G +  A  +FD+MP+RD+  +  MI G T          +F 
Sbjct: 40  KGPSVLA-TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFC 98

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           EM   ++  + ++ +SVL  C     L +GR +H L  K G    + V NAL+ MY  C 
Sbjct: 99  EMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCC 158

Query: 238 -NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
            ++ DAC VF     ++ + +S+  ++ G          L  FR ML+  +  +  +F  
Sbjct: 159 VSMDDACMVFRGI--HLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSI 216

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            + AC        G Q+HA   K GFE+   V N+ + MY  C    EA   F  + ++D
Sbjct: 217 AVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRD 276

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHA 410
           +++WNT+I+ Y + N   S +  +  M+S G  P+ FTF S++A+     F+   + IH 
Sbjct: 277 LITWNTLIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHG 335

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +   G+  N+ +SNALI  Y+K   I  ++Q+F  MS R++++W  ++ G+  +G+  +
Sbjct: 336 RIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEE 395

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMI 529
            ++ F +++ S +RPD       LS+C+    +  G +    ++ + N+     +   ++
Sbjct: 396 AVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVV 455

Query: 530 TLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
            L  + G ++ +  +  +M  + D   W   + A   H
Sbjct: 456 DLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAH 493



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 145/350 (41%), Gaps = 71/350 (20%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           +L P  +S S  + AC ++ +  FG QLHA   + G ++   V N+IL +Y         
Sbjct: 208 ELNP--FSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEA 265

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
            R F E+   D+ +W T ++                   +R  P         TE+ Y  
Sbjct: 266 NRYFYEMNQRDLITWNTLIAGY-----------------ERSNP---------TESLY-- 297

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
               +F  M       + ++F S+++ C     L  G+Q+H  + + G    +++ NALI
Sbjct: 298 ----VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALI 353

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY  CGN+ D+ +VF        D +S+  MM G  + G  EEA+  F  M+ + +RP 
Sbjct: 354 DMYSKCGNIADSHQVFGGMSRR--DLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPD 411

Query: 291 ELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            + F++++SAC                                S  G +DE    F  + 
Sbjct: 412 RVVFMAILSAC--------------------------------SHAGLVDEGLRYFKLMV 439

Query: 351 EKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFGSLLAS 398
               +S +  I       LGR+  +  AY  ++S+  +PDE  +G  L +
Sbjct: 440 GDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGA 489



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A   RS +  ++L++F  +  S    P+ ++ ++ +AACA L     G Q+H
Sbjct: 277 LITWNTLIAGYERS-NPTESLYVF-SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 334

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +R GL     ++N ++ +Y    ++    +VF  +   D+ SWT  +      G+ +
Sbjct: 335 GRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGE 394

Query: 141 YACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            A E+FDKM      PDR   V+ A+++ C+  G  D G+  F+ M
Sbjct: 395 EAVELFDKMVRSGIRPDR--VVFMAILSACSHAGLVDEGLRYFKLM 438


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 214/696 (30%), Positives = 337/696 (48%), Gaps = 104/696 (14%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           +  + PD  + ++ L AC+  + A F    Q+HA  +  G  + P V N ++ LY     
Sbjct: 104 TENVTPDESTFASVLRACSGGK-APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLY----- 157

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
                                     +K GHVD A  VF+++  +D   + AMI+G ++N
Sbjct: 158 --------------------------SKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVV 226
           G ED  I LF +MHK  V    Y F+SVLS C    L + G QLH  + K G S    V 
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NAL+T+Y   GN++ A ++F  +K +  D ISYN ++ GLA  G  + AL  F  M +  
Sbjct: 252 NALVTLYSRWGNLIAAEQIF--SKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309

Query: 287 LRPSELTFVSVMSACLCPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           ++P  +T  S++SAC     GY   Q+H+  +K G  +   +  + + +Y  C  I+ A 
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
             F   + +++V WN M+  Y Q      +   +L+MQ  G+ P+++T+ S+L    S G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +++ E IH  V  +G   N+ V + LI  YAK+  +  A  I   +   ++++W  +I 
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIA 489

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  +    + L+ F E+    +R D    S A+S+CA I +L  G+QIH     +    
Sbjct: 490 GYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSE 549

Query: 521 KMSLGNAM-----ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
            +S+GNA+     ITLY+KCG ++ + R F  M EK+ +SWNA+I+ Y+QHG G EAVS 
Sbjct: 550 DLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSL 609

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F+ M+ +                                     G +P  +H++      
Sbjct: 610 FEEMKQL-------------------------------------GLMP--NHVT------ 624

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
                       +    I+  +  W  L SAC  H N+ +G   A  LLE E +  + YV
Sbjct: 625 -----------FVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYV 673

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSN+YA +G W+     R+++K  GV K+PG SWI
Sbjct: 674 LLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWI 709



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 250/479 (52%), Gaps = 14/479 (2%)

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  +R +  ++  +   C ++G L   ++LH+ + KSGF     + + LI +Y   G 
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 239 VVDACKVFEEAKGYVCDHISY-NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           V +A K+F++       ++S+ N ++ GL +     + L  F  M+  ++ P E TF SV
Sbjct: 61  VDNAIKLFDDIPS---SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117

Query: 298 MSACLCPRVGYQV----HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           + AC   +  +QV    HA+ +  GF +   V N  I +YS  G +D A ++F RL  KD
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKD 177

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHA 410
            VSW  MIS  +Q      AIL + +M    + P  + F S+L++   IE+    E +H 
Sbjct: 178 SVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           F+   G+ +   V NAL++ Y++   +  A QIF  M  R+ I++N+LI+G    GF  +
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDR 297

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            LQ F ++ +  ++PD  T++  LS+CA + +   GKQ+H YV+K  + S + +  +++ 
Sbjct: 298 ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLD 357

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LY KC D++ +   F     ++ + WN ++ AY Q G   E+   F  MQ  G + P+Q 
Sbjct: 358 LYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEG-LMPNQY 416

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           T+ ++L  C+  G +D G +I   ++   GF       S ++D+  + G LD A  ++ 
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARGILQ 474


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/527 (34%), Positives = 292/527 (55%), Gaps = 10/527 (1%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           ++H+L+  +G     +    LI  Y   G++  A +VF+  K   C   ++N M+   + 
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFD--KSPQCGVDAWNAMIIAYSR 82

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
            G + EAL  +  M    +RP   T+  V+ AC   L  R G +   QA+  G+     V
Sbjct: 83  RGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFV 142

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             A + +Y+ CGK+DEA  +F ++  +D+V W TMI+  AQ    R A+  Y +M    +
Sbjct: 143 GAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRV 202

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             D      L+ +    G  +M   IH ++    II ++ V  +L+  YAKN  ++ A  
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  +N+I+W+ LI+GF  NGF    LQ   ++     +PD  +L   L +C+++  
Sbjct: 263 VFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGF 322

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L+ GK +HGY+++      +S   A+I +Y+KCG L  +  VF+ +  +D+ISWNA+I++
Sbjct: 323 LKLGKSVHGYIVRRLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y  HG G+EA+S F  M++   +KPD ATF ++LSA SH+GLV+ G   F  MVN+Y   
Sbjct: 382 YGIHGSGEEALSLFLQMRETN-VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQ 440

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P+E H +CM+DLL RAG ++EA+ +I S   +     W AL S C  HG   +G + A  
Sbjct: 441 PSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKK 500

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +LE   D P +Y L+SN +A A  W+E A +R+++K+TG+ K PG S
Sbjct: 501 VLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYS 547



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 215/488 (44%), Gaps = 51/488 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR G   +AL L+ ++ +S  ++PD  + +  L AC    +   G +    A+
Sbjct: 74  NAMIIAYSRRGAMFEALSLYHRM-ASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV 132

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G      V   +L+LY                                K G +D A  
Sbjct: 133 DQGYGDDVFVGAAVLNLY-------------------------------AKCGKMDEAMR 161

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VFDKM  RDL  +  MITG  +NG     + ++R+MHK  V  D      ++  C   G 
Sbjct: 162 VFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGH 221

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G  +H  + +      V V  +L+ MY   G++  A  VF   +    + IS++ ++
Sbjct: 222 SKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFR--RMLYKNVISWSALI 279

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS-GF 319
            G A  G    AL    DM     +P  ++ VSV+ AC      ++G  VH   ++   F
Sbjct: 280 SGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHF 339

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +  +  S A I MYS CG +  A  +F ++  +D +SWN +I++Y     G  A+  +L+
Sbjct: 340 DCVS--STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQ 397

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA----LISAYAKNE 435
           M+   ++PD  TF SLL++     +VE    +  I      IQ S      ++   ++  
Sbjct: 398 MRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAG 457

Query: 436 RIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE---YTLS 491
           R+++A ++  +M +   I  W  L++G L +G  + G     ++L  EL PD+   Y+L 
Sbjct: 458 RVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVL--ELNPDDPGIYSLV 515

Query: 492 VALSSCAR 499
               + AR
Sbjct: 516 SNFFATAR 523



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 133/281 (47%), Gaps = 3/281 (1%)

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           +  +LL +S     +  IHA + + GI  +   +  LI +YA+   I+ A Q+F      
Sbjct: 9   SLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQC 68

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
            +  WN +I  +   G   + L  +  +    +RPD  T +V L +C R   LR G++  
Sbjct: 69  GVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETW 128

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
              +       + +G A++ LYAKCG +D ++RVF+ M  +D + W  +I+  AQ+G+ +
Sbjct: 129 RQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAR 188

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           EAV  ++ M    R++ D      ++ AC+  G    G  I   M+     +      S 
Sbjct: 189 EAVDIYRQMHK-KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTS- 246

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           ++D+  + G+L+ A  V   + +     +W AL S  A +G
Sbjct: 247 LVDMYAKNGHLELASCVFR-RMLYKNVISWSALISGFAQNG 286


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 195/547 (35%), Positives = 300/547 (54%), Gaps = 16/547 (2%)

Query: 201 AGLLEFGRQLHSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           A  +  GR+ H+   K+G          NAL++MY   G V DA ++F  A     D ++
Sbjct: 27  AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 86

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N M+  L   G  +EA+    DM+   +RP  +TF S + AC       VG ++HA  +
Sbjct: 87  WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 146

Query: 316 KSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRS 372
           K     A + V++A + MY++  ++ +A  +F  + +  K +  WN MI  YAQ  +   
Sbjct: 147 KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEE 206

Query: 373 AILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
           A+  +  M++  G  P E T  S+L +    E     E +H +V   G+  N  V NAL+
Sbjct: 207 ALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALM 266

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRP 485
             YA+  +   A +IF  +   ++++WNTLI G ++ G      Q   E+   E   + P
Sbjct: 267 DMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVP 326

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  TL   L  CA +++   GK+IHGY +++ L + +++G+A++ +YAKCG L  S  VF
Sbjct: 327 NAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVF 386

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + +  ++TI+WN LI AY  HG G EA   F  M   G  +P++ TF A L+ACSH+G+V
Sbjct: 387 DRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMV 446

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALF 664
           D G ++F +M  D+G  P  D L+C++D+LGRAG LDEA  ++ S    + +   W  + 
Sbjct: 447 DRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
            AC  H N+ LG I    LLE E ++ S YVLL NIY+AAG W  AA +R  ++R GV K
Sbjct: 507 GACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAK 566

Query: 725 QPGCSWI 731
           +PGCSWI
Sbjct: 567 EPGCSWI 573



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 146/531 (27%), Positives = 234/531 (44%), Gaps = 51/531 (9%)

Query: 58  YSLSTTLAACANLRNAA----FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           ++L + L A ++L  AA     G + HA+AL+ GL            L+ + R       
Sbjct: 11  FTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGL------------LHGHQR------- 51

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF-DKMPDR-DLPVYNAMITGCTENGYED 171
                     +++   LS   ++G V  A  +F    P R D+  +N M++   ++G  D
Sbjct: 52  ----------FAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFD 101

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG-FSCLVSVVNAL 229
             +    +M  L VR D  +FAS L  C    LL+ GR++H+ V K    +    V +AL
Sbjct: 102 EAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASAL 161

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLR 288
           + MY     V  A +VF+           +N M+ G A  G  EEAL  F  M   A   
Sbjct: 162 VDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFV 221

Query: 289 PSELTFVSVMSACLCPR--VGYQ-VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E T  SV+ AC       G + VH   +K G      V NA + MY+  GK D A  I
Sbjct: 222 PCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRI 281

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV---GIRPDEFTFGSLLASSGFI 402
           FA +   D+VSWNT+I+    +     A     EMQ +   G+ P+  T  +LL     +
Sbjct: 282 FAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAIL 341

Query: 403 EMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
                 + IH +   + + T++ V +AL+  YAK   +  +  +F  +  RN ITWN LI
Sbjct: 342 AAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLI 401

Query: 460 NGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNN 517
             + ++G   +    F  +  S E RP+E T   AL++C+    +  G Q+ H     + 
Sbjct: 402 MAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHG 461

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQH 566
           +     +   ++ +  + G LD +  +   M   E+   +W+ ++ A   H
Sbjct: 462 VEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 512



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 210/463 (45%), Gaps = 52/463 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++ L +SG + +A+     +  +  ++PD  + ++ L AC+ L     G ++H
Sbjct: 84  VVTWNTMVSVLVQSGMFDEAVQTLYDM-VALGVRPDGVTFASALPACSRLELLDVGREMH 142

Query: 81  AYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           AY ++   L A   VA+ ++ +Y                                    V
Sbjct: 143 AYVIKDDELAANSFVASALVDMYATHE-------------------------------QV 171

Query: 140 DYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVL 196
             A +VFD +PD  + L ++NAMI G  + G ++  + LF  M  +        + ASVL
Sbjct: 172 GKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVL 231

Query: 197 SVCDAGLLEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C       G++ +H  V K G +    V NAL+ MY   G    A ++F  A   + D
Sbjct: 232 PACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIF--AMVDLPD 289

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSAC---LCPRVGYQ 309
            +S+N ++ G    G V +A    R+M       + P+ +T ++++  C     P  G +
Sbjct: 290 VVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKE 349

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H  A++   +   +V +A + MY+ CG +  +  +F RL  ++ ++WN +I  Y    L
Sbjct: 350 IHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGL 409

Query: 370 GRSAILAYLEMQSVG-IRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVS 424
           G  A + +  M + G  RP+E TF + LA+   SG ++  +++ HA    +G+     + 
Sbjct: 410 GGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDIL 469

Query: 425 NALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLN 465
             ++    +  R+ +AY +  +M    + +  W+T++    L+
Sbjct: 470 ACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 512



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 160/363 (44%), Gaps = 51/363 (14%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           ++ K+L +  N  +   +++G  ++AL LF ++ +     P   ++++ L ACA  R+ A
Sbjct: 183 DSGKQLGM-WNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACA--RSEA 239

Query: 75  FGNQ--LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
           F  +  +H Y ++ G+     V N ++ +Y         +R+F+ +  PDV SW      
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSW------ 293

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD---VRRDN 189
                                    N +ITGC   G+      L REM +L+   V  + 
Sbjct: 294 -------------------------NTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNA 328

Query: 190 YSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            +  ++L  C        G+++H    +      V+V +AL+ MY  CG +  +  VF+ 
Sbjct: 329 ITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDR 388

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSAC----L 302
                 + I++NV++      G   EA + F D + AS   RP+E+TF++ ++AC    +
Sbjct: 389 LPRR--NTITWNVLIMAYGMHGLGGEATVLF-DRMTASGEARPNEVTFMAALAACSHSGM 445

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ--EKDIVSWNTM 360
             R     HA     G E    +    + +    G++DEA  +   ++  E+ + +W+TM
Sbjct: 446 VDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTM 505

Query: 361 IST 363
           +  
Sbjct: 506 LGA 508


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 199/606 (32%), Positives = 318/606 (52%), Gaps = 19/606 (3%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHK-----LDVRRDNYSF 192
           + +A ++F + P R + ++NA++   C E  + +  + LFR+M+      ++ R DNYS 
Sbjct: 187 IHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVET-LSLFRQMNNVSSVSIEERPDNYSV 245

Query: 193 ASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +  L  C AGL  L  G+ +H  + K      + V +ALI +Y  CG + DA KVF E  
Sbjct: 246 SIALKSC-AGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP 304

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCP---RV 306
               D + +  ++ G    G  E AL  F  M+V+  + P  +T VSV SAC      ++
Sbjct: 305 K--PDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKL 362

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G  VH    + G +    ++N+ + +Y   G I  A  +F  + +KDI+SW+TM++ YA 
Sbjct: 363 GRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 422

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQV 423
                  +  + EM    I+P+  T  S+L +   I  +E    IH      G      V
Sbjct: 423 NGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTV 482

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           S AL+  Y K    ++A  +F+ M  +++I W  L +G+  NG   + +  F  +L S  
Sbjct: 483 STALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 542

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
           RPD   L   L++ + +  L+    +H +V+KN   +   +G ++I +YAKC  ++ + +
Sbjct: 543 RPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK 602

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  M  KD ++W+++I+AY  HG+G+EA+  F  M +    KP+  TF ++LSACSH+G
Sbjct: 603 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 662

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           L+ +G  +FD MVN Y   P  +H + M+DLLGR G LD A  VIN+  +QA  D W AL
Sbjct: 663 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 722

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             AC  H N+++G + A  L   + +    Y+LLSNIY+    W  A  +R L+K   + 
Sbjct: 723 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 782

Query: 724 KQPGCS 729
           K  G S
Sbjct: 783 KIVGQS 788



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/578 (26%), Positives = 267/578 (46%), Gaps = 51/578 (8%)

Query: 35  GHYQDALHLFVQIHS----SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           G + + L LF Q+++    S + +PD YS+S  L +CA LR    G  +H +  +  +  
Sbjct: 216 GEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDG 275

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V + ++ LY     +    +VF E   PDV  WT+ +S   + G  + A   F +M 
Sbjct: 276 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 335

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GR 208
             +                               V  D  +  SV S C A L  F  GR
Sbjct: 336 VSE------------------------------KVSPDPVTLVSVASAC-AQLSNFKLGR 364

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H  V + G    + + N+L+ +Y   G++ +A  +F E      D IS++ M+   A 
Sbjct: 365 SVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDK--DIISWSTMVACYAD 422

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSV 325
            G   + L  F +ML   ++P+ +T VSV+ AC C      G ++H  A+  GFE  T+V
Sbjct: 423 NGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTV 482

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S A + MY  C   ++A  +F R+ +KD+++W  + S YA   +   ++  +  M S G 
Sbjct: 483 STALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGT 542

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPD      +L +    G ++    +HAFV  NG   N  +  +LI  YAK   I+ A +
Sbjct: 543 RPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANK 602

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARIS 501
           +F  M+ ++++TW+++I  +  +G   + L+ F ++   S+ +P+  T    LS+C+   
Sbjct: 603 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 662

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVF-NMMIEKDTISWNAL 559
            ++ G  +   ++    +   S   A M+ L  + G+LD +L V  NM ++     W AL
Sbjct: 663 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 722

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           + A   H   K       A +++  + P+ A +  +LS
Sbjct: 723 LGACRIHQNIKMGEV---AAKNLFSLDPNHAGYYILLS 757



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 195/429 (45%), Gaps = 42/429 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   +SG  + AL  F ++  S K+ PD  +L +  +ACA L N   G  +H +  R G
Sbjct: 315 ISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKG 374

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     +AN++L LY     + +   +F E+ + D+ SW+T + AC       YA     
Sbjct: 375 LDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV-AC-------YA----- 421

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                             +NG E   + LF EM    ++ +  +  SVL  C     LE 
Sbjct: 422 ------------------DNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEE 463

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G ++H L    GF    +V  AL+ MY  C +   A  +F        D I++ V+  G 
Sbjct: 464 GMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKK--DVIAWAVLFSGY 521

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYT 323
           A  G V E++  FR+ML +  RP  +  V +++      +  Q   +HA  +K+GFE   
Sbjct: 522 ADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ 581

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS- 382
            +  + I +Y+ C  I++A  +F  +  KD+V+W+++I+ Y     G  A+  + +M + 
Sbjct: 582 FIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANH 641

Query: 383 VGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              +P+  TF S+L++   SG I E + M    V    +  N +    ++    +   + 
Sbjct: 642 SDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELD 701

Query: 439 QAYQIFHNM 447
            A  + +NM
Sbjct: 702 MALDVINNM 710


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 361/709 (50%), Gaps = 78/709 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   + + PD + +     AC  L+ + FG  +H Y  +AGL    
Sbjct: 126 RIGLGEGALMGFVEM-LENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 184

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD +PDR
Sbjct: 185 FVASSLADMY-------------------------------GKCGVLDDARKVFDYIPDR 213

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           +   +NA++ G  +NG  +  I L  EM K  +     + ++ LS   + G +E G+Q H
Sbjct: 214 NAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSH 273

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV-CDHISYNVMMDGLASVG 270
           ++   +G      +  +++  Y   G +  A  +F+   G +  D +++N+++ G    G
Sbjct: 274 AIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFD---GMIEKDVVTWNLLISGYVQQG 330

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            VEEA+   + M   +L+   +T  ++MSA       ++G ++    ++ G E+   +++
Sbjct: 331 LVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLAS 390

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
            A+ MY+ CG I  A  +F    +KD++ WNT++S YA   L   A+  + EMQ   + P
Sbjct: 391 TAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPP 450

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           +  T+                                N +I +  +N ++ +A ++F  M
Sbjct: 451 NVITW--------------------------------NLIILSLLRNGQVNEAKEMFLQM 478

Query: 448 SPR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
                  N+I+W T++NG + NG   + +    ++  S LRP+ +T++VALS+C  ++SL
Sbjct: 479 QSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASL 538

Query: 504 RHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N   S   S+  +++ +YAKCGD++ + RVF   +  +   +NA+ISA
Sbjct: 539 HFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISA 598

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA +G+ +EA++ +++++D G +KPD  T T++LSAC++   V+    +F  MV+ +G  
Sbjct: 599 YALYGKVREAITLYRSLED-GGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMK 657

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   M+DLL  AG  D+A R++     +  +    +LF +C+      L   ++  
Sbjct: 658 PCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKH 717

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E D    YV++SN YA  G W+E A +RE++K  G+ K+PGCSWI
Sbjct: 718 LLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 766



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 161/659 (24%), Positives = 304/659 (46%), Gaps = 82/659 (12%)

Query: 28  LANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++ + + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 18  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYG--EILQGCVYERDLCTGQQIHAQILKK 75

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + + +V FS+++  +V+SW   +    ++G  + A  
Sbjct: 76  GDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALM 135

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F +M                ENG                +  DN+   +V   C A   
Sbjct: 136 GFVEM---------------LENG----------------IFPDNFVVPNVCKACGALQW 164

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNV 261
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+    Y+ D   +++N 
Sbjct: 165 SRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFD----YIPDRNAVAWNA 220

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           +M G    G  EEA+    +M    + P+ +T  + +SA         G Q HA A+ +G
Sbjct: 221 LMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNG 280

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            E    +  + +  Y   G I+ A MIF  + EKD+V+WN +IS Y Q+ L   AI    
Sbjct: 281 LELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQ 340

Query: 379 EMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M+   ++ D  T  +L++   S+  +++ + I  +   +G+ ++I +++  +  YAK  
Sbjct: 341 LMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCG 400

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A ++F +   +++I WNTL++ +  +G   + L+ F E+ +  + P+  T ++ + 
Sbjct: 401 SIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIIL 460

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S  R   +   K++                                L++ +  I  + IS
Sbjct: 461 SLLRNGQVNEAKEMF-------------------------------LQMQSSGIFPNLIS 489

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +++   Q+G  +EA+   + MQ+ G ++P+  T T  LSAC +   +  G  I   +
Sbjct: 490 WTTMMNGLVQNGCSEEAILFLRKMQESG-LRPNAFTITVALSACVNLASLHFGRSIHGYI 548

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           + +  +  +    + ++D+  + G +++AERV  S+ + +    + A+ SA A +G +R
Sbjct: 549 IRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSK-LCSELPLYNAMISAYALYGKVR 606



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 11/422 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQA 314
           SY   +  L   G + EAL    +M   ++R     +  ++  C+  R    G Q+HAQ 
Sbjct: 13  SYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQI 72

Query: 315 MKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           +K G  +     +    +  Y+ C  ++ A ++F++L+ +++ SW  +I    +  LG  
Sbjct: 73  LKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEG 132

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A++ ++EM   GI PD F   ++  + G ++       +H +V   G+   + V+++L  
Sbjct: 133 ALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLAD 192

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   +  A ++F  +  RN + WN L+ G++ NG   + ++  SE+    + P   T
Sbjct: 193 MYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVT 252

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           +S  LS+ A +  +  GKQ H   + N L     LG +++  Y K G ++ +  +F+ MI
Sbjct: 253 VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMI 312

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           EKD ++WN LIS Y Q G  +EA+   + M+    +K D  T + ++SA +    +  G 
Sbjct: 313 EKDVVTWNLLISGYVQQGLVEEAIYMCQLMRR-ENLKFDCVTLSTLMSAATSTQNLKLGK 371

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            I    +  +G        S  +D+  + G +  A++V +S  +Q     W  L SA A 
Sbjct: 372 EIQCYCIR-HGLESDIVLASTAVDMYAKCGSIVNAKKVFDST-VQKDLILWNTLLSAYAD 429

Query: 670 HG 671
            G
Sbjct: 430 SG 431



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 61/415 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  ++A+++  Q+     LK D  +LST ++A  + +N   G ++  Y +
Sbjct: 320 NLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 378

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R GL++   +A+T + +Y     +V+ K+VF      D+  W T LSA            
Sbjct: 379 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 438

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 439 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLV 498

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + ++    LS C +   L FGR +H  + ++  +S   
Sbjct: 499 QNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSA 558

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDM 282
           S+  +L+ MY  CG++  A +VF      +C  +  YN M+   A  G+V EA+  +R +
Sbjct: 559 SIETSLVDMYAKCGDINKAERVFGSK---LCSELPLYNAMISAYALYGKVREAITLYRSL 615

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAMKSGFEAYTSVSNAAITMYS 334
               ++P  +T  S++SAC   R   Q        V    MK   E Y       + + +
Sbjct: 616 EDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHY----GLMVDLLA 671

Query: 335 SCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           S G+ D+A  +   +  K D     ++  + ++++  ++ ++ YL    +   PD
Sbjct: 672 SAGETDKALRLMEEMPYKPDARMVQSLFESCSKQH--KTELVEYLSKHLLESEPD 724


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/613 (31%), Positives = 313/613 (51%), Gaps = 7/613 (1%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PDV      L    K G +  A ++FD+MP +++  +   I+GCT NG  +    +F +M
Sbjct: 68  PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127

Query: 181 HKLDVRRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            +  V  ++++  + L+ C A        Q+HSL  ++GF+    + + LI +Y  CG++
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A +VF   +    D + Y  ++  L   G +  A+     M    L+P+E T  S+++
Sbjct: 188 RAAEEVFRRMEAP--DVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLA 245

Query: 300 ACLCPR-VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
            C  PR +G Q+H   +K         S A I  YS  G    A  +F  L+ K++VSW 
Sbjct: 246 EC--PRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
           +M+    +      A+  + EM S G++P+EF F   L++ G + +   IH       ++
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLM 363

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           T+I+VSNAL+S Y ++  + +   +   +   ++++W   I+    NGF  + +    ++
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 423

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
                 P++Y  S  LSSCA ++ L  G+Q+H   LK     K+  GNA+I +Y+KCG +
Sbjct: 424 HSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRI 483

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +   F++M   D +SWN+LI   AQHG+   A+  F  M      +PD +TF +VL  
Sbjct: 484 GSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCS-SDWRPDDSTFLSVLVG 542

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+HAGLV +G   F  M + YG  P   H +CM+D+LGR G   EA R+I +   +    
Sbjct: 543 CNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVL 602

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L ++C  H NL +G++ A  L+E  +   + YVL+SN+YA    W +A  +R  + 
Sbjct: 603 IWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMD 662

Query: 719 RTGVIKQPGCSWI 731
             GV K  G SWI
Sbjct: 663 EIGVKKDAGWSWI 675



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 249/547 (45%), Gaps = 46/547 (8%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++  +R+G  + A  +F  +  S  + P+ ++ +  LAACA       G Q+H+ A+RA
Sbjct: 107 AISGCTRNGRPEAAATMFADMLES-GVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA 165

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G  A   + + ++ LY     L + + VF  ++ PDV  +T+ +SA  + G +  A +V 
Sbjct: 166 GFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVL 225

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF 206
            +M               T  G                ++ + ++  S+L+ C  G+   
Sbjct: 226 CQM---------------TRQG----------------LQPNEHTMTSMLAECPRGI--- 251

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMD 264
           G Q+H  + K   S  V    ALI  Y   G+   A  VFE  E+K  V    S+  MM 
Sbjct: 252 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVV----SWCSMMQ 307

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
                GR+++AL  F +M+   ++P+E  F   +SAC    +G Q+H  A+K        
Sbjct: 308 LCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIR 367

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           VSNA ++MY   G + E   +  +++  D+VSW   IS   Q      A+   L+M S G
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 385 IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             P+++ F S L+S   + ++     +H      G    +   NALI+ Y+K  RI  A 
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
             F  M   ++++WN+LI+G   +G     L+ FSE+  S+ RPD+ T    L  C    
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAG 547

Query: 502 SLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNAL 559
            ++ G+     +  +  L    S    MI +  + G    +LR+  NM  E D + W  L
Sbjct: 548 LVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTL 607

Query: 560 ISAYAQH 566
           +++   H
Sbjct: 608 LASCKLH 614


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 211/684 (30%), Positives = 337/684 (49%), Gaps = 50/684 (7%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           L     AC N R+ +   QLH+   + G+      A  + SLY     L + ++VF E  
Sbjct: 7   LVDLFQACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP 63

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           +P+V+ W + L +  +           +K  +  L +++ MI    E             
Sbjct: 64  HPNVHLWNSTLRSYCR-----------EKQWEETLRLFHLMICTAGE------------- 99

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
                   DN++    L  C AGL  LE G+ +H    K+      + V +AL+ +Y  C
Sbjct: 100 ------APDNFTIPIALKAC-AGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC 152

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS---LRPSELT 293
           G + +A KVFEE +    D + +  M+ G       EEAL  F  M++     L P  +T
Sbjct: 153 GQMGEALKVFEEFQRP--DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDP--VT 208

Query: 294 FVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            VSV+SAC   L  + G  VH   ++  F+    + N+ + +Y+  G    A  +F+++ 
Sbjct: 209 LVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMP 268

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           EKD++SW+TMI+ YA       A+  + EM      P+  T  S L   A S  +E  + 
Sbjct: 269 EKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 328

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH      G   +  VS ALI  Y K     +A  +F  +  +++++W  L++G+  NG 
Sbjct: 329 IHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGM 388

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +  F  +L   ++PD   +   L++ + +   +    +HGYV+++   S + +G +
Sbjct: 389 AYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGAS 448

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I LY+KCG L  ++++F  MI +D + W+++I+AY  HG G EA+  F  M     ++P
Sbjct: 449 LIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRP 508

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           +  TF ++LSACSHAGLV++G +IFD MV+DY   P  +H   M+DLLGR G L +A  +
Sbjct: 509 NNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDI 568

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           IN   I A    W AL  AC  H N+ +G   A  L   +      Y+LLSNIYA  G W
Sbjct: 569 INRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKW 628

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           +  A +R  +K  G+ K  G S +
Sbjct: 629 DNVAELRTRIKERGLKKMFGQSMV 652



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 181/714 (25%), Positives = 331/714 (46%), Gaps = 56/714 (7%)

Query: 35   GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
            G   +AL +F Q+  +  ++P+  +  + L+AC+           HA  +  GLK +   
Sbjct: 488  GRGGEALEIFDQMVKNSTVRPNNVTFLSILSACS-----------HAGLVEEGLKIF--- 533

Query: 95   ANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
                              R+  + Q  PD   +   +    ++G +  A ++ ++MP   
Sbjct: 534  -----------------DRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPA 576

Query: 154  LP-VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS--FASVLSVCDAGLLEFGRQL 210
             P V+ A++  C  +   ++G    + +  LD     Y    +++ +V   G  +   +L
Sbjct: 577  GPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAV--DGKWDNVAEL 634

Query: 211  HSLVTKSGFS-----CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
             + + + G        +V V   + +   +     D+ K++E  +      +   V +  
Sbjct: 635  RTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLRKLEA-QMGKEVYIPD 693

Query: 266  LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA-----CLCPRVGYQVHAQAMKSGFE 320
            L  +     A+++F       ++ +E  + ++ SA       C     + HA+    G +
Sbjct: 694  LDFLLHDTGAVLQFWQ----RIKATESKYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQ 749

Query: 321  AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              + +      MY S  +ID A ++F  +       WN MI  +A      S++  Y +M
Sbjct: 750  YDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKM 809

Query: 381  QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
               G++PD+F F   L S   +  ++   +IH  +   G   ++ V  AL+  YAK   I
Sbjct: 810  MEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDI 869

Query: 438  KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            + A  +F  M+ R++++W ++I+G+  NG+  + L  F  +  S + P+  ++   L +C
Sbjct: 870  EAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLAC 929

Query: 498  ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
              + +LR G+  H YV++      + +  A++ +Y+KCG LD +  +F+    KD + W+
Sbjct: 930  GNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWS 989

Query: 558  ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            A+I++Y  HG G++A+  F  M   G ++P   TFT VLSACSH+GL+++G   F  M  
Sbjct: 990  AMIASYGIHGHGRKAIDLFDQMVKAG-VRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTE 1048

Query: 618  DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            ++       + +CM+DLLGRAG L EA  +I +  ++  +  W +L  AC  H NL L  
Sbjct: 1049 EFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAE 1108

Query: 678  IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             IA  L   +      +VLLSNIYAA   W E   +R+++ R G  K  G S +
Sbjct: 1109 KIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLV 1162



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 161/591 (27%), Positives = 271/591 (45%), Gaps = 60/591 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +L +  R   +++ L LF  +  +    PD +++   L ACA LR    G  +H +A 
Sbjct: 71  NSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAK 130

Query: 85  RAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   + +   V + ++ LY     +    +VF E Q PD   WT+               
Sbjct: 131 KNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTS--------------- 175

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAG 202
                           M+TG  +N   +  + LF +M  +D V  D  +  SV+S C   
Sbjct: 176 ----------------MVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQL 219

Query: 203 L-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           L ++ G  +H LV +  F   + +VN+L+ +Y   G    A  +F +      D IS++ 
Sbjct: 220 LNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEK--DVISWST 277

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
           M+   A+     EAL  F +M+     P+ +T VS + AC   R    G ++H  A+  G
Sbjct: 278 MIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKG 337

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           FE   SVS A I MY  C   DEA  +F RL +KD+VSW  ++S YAQ  +   ++  + 
Sbjct: 338 FELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFR 397

Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M S GI+PD      +LA+S   G  +    +H +V  +G  +N+ V  +LI  Y+K  
Sbjct: 398 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCG 457

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVAL 494
            +  A ++F  M  R+++ W+++I  + ++G   + L+ F +++  S +RP+  T    L
Sbjct: 458 SLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSIL 517

Query: 495 SSCARISSLRHG-----KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
           S+C+    +  G     + +H Y L+ +       G  M+ L  + G L  ++ + N M 
Sbjct: 518 SACSHAGLVEEGLKIFDRMVHDYQLRPD---SEHFG-IMVDLLGRIGQLGKAMDIINRMP 573

Query: 549 IEKDTISWNALISAYAQHG--EGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           I      W AL+ A   H   E  EA     A +++  + P  A +  +LS
Sbjct: 574 IPAGPHVWGALLGACRIHHNIEMGEA-----AAKNLFWLDPSHAGYYILLS 619



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 192/389 (49%), Gaps = 11/389 (2%)

Query: 290 SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           S    V +  AC   R   Q+H+Q  K+G    T  +    ++Y+ C  +  A  +F   
Sbjct: 3   SRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDET 62

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
              ++  WN+ + +Y +       + L +L + + G  PD FT    L +   + M+E+ 
Sbjct: 63  PHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELG 122

Query: 408 --IHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
             IH F   N  I +++ V +AL+  Y+K  ++ +A ++F      + + W +++ G+  
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQ 182

Query: 465 NGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
           N  P + L  FS+++M + +  D  TL   +S+CA++ +++ G  +HG V++      + 
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           L N+++ LYAK G    +  +F+ M EKD ISW+ +I+ YA +    EA++ F  M +  
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE-K 301

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           R +P+  T  + L AC+ +  +++G +I    V   GF       + ++D+  +    DE
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWK-GFELDFSVSTALIDMYMKCSCPDE 360

Query: 644 AERVINSQHIQARS-DNWWALFSACAAHG 671
           A  +   Q +  +   +W AL S  A +G
Sbjct: 361 AVDLF--QRLPKKDVVSWVALLSGYAQNG 387



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 147/345 (42%), Gaps = 44/345 (12%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N+ +   +  G +  +L L+ ++     LKPD ++    L +CA L +   G  +H + +
Sbjct: 787  NVMIRGFATDGRFLSSLELYSKMMEK-GLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV 845

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
              G      V   ++ +Y    D+ + + VF ++   D+ SWT+                
Sbjct: 846  CCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTS---------------- 889

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                           MI+G   NGY    +G F  M    V  +  S  SVL  C + G 
Sbjct: 890  ---------------MISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA 934

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            L  G   HS V ++GF   + V  A++ MY  CG++  A  +F+E  G   D + ++ M+
Sbjct: 935  LRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGK--DLVCWSAMI 992

Query: 264  DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGF 319
                  G   +A+  F  M+ A +RPS +TF  V+SA  C   G     +++ Q M   F
Sbjct: 993  ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSA--CSHSGLLEEGKMYFQLMTEEF 1050

Query: 320  EAYTSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
                 +SN A  + +    G++ EA  +   +  E D   W +++
Sbjct: 1051 VIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  326 bits (836), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 212/705 (30%), Positives = 344/705 (48%), Gaps = 94/705 (13%)

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
           KA P++  + L+L +N ++     +    I  P +   TTF S   +            +
Sbjct: 3   KAAPNLCFSPLTLNQNRKENFFSSQNGCFIHKPSLK--TTFFSPIFRSCIPVRISATPTR 60

Query: 149 MPDRDLPVYNAMIT-----GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
             D  +  YNA I      G  EN  E + +    E+       +  ++ SVL +C AGL
Sbjct: 61  TIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSEL-------ETKTYGSVLQLC-AGL 112

Query: 204 --LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-------------- 247
             L  G+++HS++  +      ++   L++ Y  CG++ +  +VF+              
Sbjct: 113 KSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMV 172

Query: 248 -------EAKGYVC----------------------------DHISYNVMMDGLASVGRV 272
                  + K  +C                            D IS+N M+ G  S G  
Sbjct: 173 SEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLT 232

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAA 329
           E  L  ++ M+   +     T +SV+  C       +G  VH+ A+KS FE   + SN  
Sbjct: 233 ERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTL 292

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           + MYS CG +D A  +F ++ E+++VSW +MI+ Y +      AI+   +M+  G++ D 
Sbjct: 293 LDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDV 352

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
               S+L   A SG ++  + +H ++  N + +N+ V NAL+  YAK   ++ A  +F  
Sbjct: 353 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 412

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  ++II+WNT++                      EL+PD  T++  L +CA +S+L  G
Sbjct: 413 MVVKDIISWNTMV---------------------GELKPDSRTMACILPACASLSALERG 451

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K+IHGY+L+N   S   + NA++ LY KCG L  +  +F+M+  KD +SW  +I+ Y  H
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G EA++ F  M+D G I+PD+ +F ++L ACSH+GL++ G R F  M ND+   P  +
Sbjct: 512 GYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLE 570

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +CM+DLL R G L +A + I +  I   +  W AL   C  + ++ L   +A  + E 
Sbjct: 571 HYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFEL 630

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E +    YVLL+NIYA A   EE   +RE + + G+ K PGCSWI
Sbjct: 631 EPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWI 675



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 271/586 (46%), Gaps = 60/586 (10%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI+AT    + T    +   N  + +  + G  ++A+ L      S +L+   Y   + L
Sbjct: 53  RISAT---PTRTIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKS-ELETKTYG--SVL 106

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
             CA L++   G ++H+      +     +   ++S Y    DL   +RVF  ++  +VY
Sbjct: 107 QLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVY 166

Query: 125 SWTTFLSACTKMGHV--------------------DYACEVFDKMPDRDLPVYNAMITGC 164
            W   +S   K+G                      + A E+FDK+ DRD+  +N+MI+G 
Sbjct: 167 LWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGY 226

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV 223
             NG  + G+G++++M  L +  D  +  SVL  C ++G L  G+ +HSL  KS F   +
Sbjct: 227 VSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRI 286

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           +  N L+ MY  CG++  A +VFE+      + +S+  M+ G    G  + A+I  + M 
Sbjct: 287 NFSNTLLDMYSKCGDLDGALRVFEKMGER--NVVSWTSMIAGYTRDGWSDGAIILLQQME 344

Query: 284 VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              ++   +   S++ AC        G  VH     +   +   V NA + MY+ CG ++
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
            A  +F+ +  KDI+SWNTM+                       ++PD  T   +L   A
Sbjct: 405 GANSVFSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILPACA 443

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           S   +E  + IH ++  NG  ++  V+NAL+  Y K   +  A  +F  +  +++++W  
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           +I G+ ++G+  + +  F+E+  + + PDE +    L +C+    L  G +   Y++KN 
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFF-YIMKND 562

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
            N+  K+     M+ L ++ G+L  + +    + I  D   W AL+
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 608



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 191/437 (43%), Gaps = 73/437 (16%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y+  ++L + +        D+ ++ + L  CAN    + G  +H+ A+++  +   + 
Sbjct: 237 GIYKQMMYLGIDV--------DLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINF 288

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +NT+L +Y    DL    RVF ++   +V SWT+ ++                       
Sbjct: 289 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA----------------------- 325

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                   G T +G+ D  I L ++M K  V+ D  +  S+L  C  +G L+ G+ +H  
Sbjct: 326 --------GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 377

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           +  +  +  + V NAL+ MY  CG++  A  VF      V D IS+N M           
Sbjct: 378 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM--VVKDIISWNTM----------- 424

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
                     V  L+P   T   ++ AC        G ++H   +++G+ +   V+NA +
Sbjct: 425 ----------VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 474

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            +Y  CG +  A ++F  +  KD+VSW  MI+ Y     G  AI  + EM+  GI PDE 
Sbjct: 475 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 534

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS----NALISAYAKNERIKQAYQIFHN 446
           +F S+L +     ++E    F +I     NI+        ++   ++   + +AY+    
Sbjct: 535 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 594

Query: 447 M--SPRNIITWNTLING 461
           +  +P   I W  L+ G
Sbjct: 595 LPIAPDATI-WGALLCG 610


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 173/487 (35%), Positives = 270/487 (55%), Gaps = 30/487 (6%)

Query: 253 VCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVG 307
           +CD   IS+N M+ G  S G  E  L  ++ M+   +     T +SV+  C       +G
Sbjct: 73  LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLG 132

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VH+ A+KS FE   + SN  + MYS CG +D A  +F ++ E+++VSW +MI+ Y + 
Sbjct: 133 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRD 192

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVS 424
                AI+   +M+  G++ D     S+L   A SG ++  + +H ++  N + +N+ V 
Sbjct: 193 GWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVC 252

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           NAL+  YAK   ++ A  +F  M  ++II+WNT++                      EL+
Sbjct: 253 NALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GELK 291

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD  T++  L +CA +S+L  GK+IHGY+L+N   S   + NA++ LY KCG L  +  +
Sbjct: 292 PDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLL 351

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+M+  KD +SW  +I+ Y  HG G EA++ F  M+D G I+PD+ +F ++L ACSH+GL
Sbjct: 352 FDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAG-IEPDEVSFISILYACSHSGL 410

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           ++ G R F  M ND+   P  +H +CM+DLL R G L +A + I +  I   +  W AL 
Sbjct: 411 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALL 470

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
             C  + ++ L   +A  + E E +    YVLL+NIYA A  WEE   +RE + + G+ K
Sbjct: 471 CGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRK 530

Query: 725 QPGCSWI 731
            PGCSWI
Sbjct: 531 NPGCSWI 537



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 233/493 (47%), Gaps = 54/493 (10%)

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV------------------ 139
           ++S Y    DL   +RVF  ++  +VY W   +S   K+G                    
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 140 --DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
             + A E+FDK+ DRD+  +N+MI+G   NG  + G+G++++M  L +  D  +  SVL 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C  +G L  G+ +HSL  KS F   ++  N L+ MY  CG++  A +VFE+      + 
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGER--NV 179

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +S+  M+ G    G  + A+I  + M    ++   +   S++ AC        G  VH  
Sbjct: 180 VSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 239

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
              +   +   V NA + MY+ CG ++ A  +F+ +  KDI+SWNTM+            
Sbjct: 240 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE---------- 289

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
                      ++PD  T   +L   AS   +E  + IH ++  NG  ++  V+NAL+  
Sbjct: 290 -----------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDL 338

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A  +F  +  +++++W  +I G+ ++G+  + +  F+E+  + + PDE + 
Sbjct: 339 YVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSF 398

Query: 491 SVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
              L +C+    L  G +   Y++KN  N+  K+     M+ L ++ G+L  + +    +
Sbjct: 399 ISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 457

Query: 549 -IEKDTISWNALI 560
            I  D   W AL+
Sbjct: 458 PIAPDATIWGALL 470



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 190/437 (43%), Gaps = 73/437 (16%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y+  ++L + +        D+ ++ + L  CA     + G  +H+ A+++  +   + 
Sbjct: 99  GIYKQMMYLGIDV--------DLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINF 150

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +NT+L +Y    DL    RVF ++   +V SWT+ ++                       
Sbjct: 151 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA----------------------- 187

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
                   G T +G+ D  I L ++M K  V+ D  +  S+L  C  +G L+ G+ +H  
Sbjct: 188 --------GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDY 239

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           +  +  +  + V NAL+ MY  CG++  A  VF      V D IS+N M           
Sbjct: 240 IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTM--VVKDIISWNTM----------- 286

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
                     V  L+P   T   ++ AC        G ++H   +++G+ +   V+NA +
Sbjct: 287 ----------VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALV 336

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            +Y  CG +  A ++F  +  KD+VSW  MI+ Y     G  AI  + EM+  GI PDE 
Sbjct: 337 DLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEV 396

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS----NALISAYAKNERIKQAYQIFHN 446
           +F S+L +     ++E    F +I     NI+        ++   ++   + +AY+    
Sbjct: 397 SFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIET 456

Query: 447 M--SPRNIITWNTLING 461
           +  +P   I W  L+ G
Sbjct: 457 LPIAPDATI-WGALLCG 472



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 172/374 (45%), Gaps = 74/374 (19%)

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           ++ Y++CG + E   +F  +++K++  WN M+S YA+    + +I  +  M   GI    
Sbjct: 3   VSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI---- 58

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
                                                      + +R + A ++F  +  
Sbjct: 59  -------------------------------------------EGKRSESASELFDKLCD 75

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R++I+WN++I+G++ NG   +GL  + +++   +  D  T+   L  CA+  +L  GK +
Sbjct: 76  RDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAV 135

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H   +K++   +++  N ++ +Y+KCGDLD +LRVF  M E++ +SW ++I+ Y + G  
Sbjct: 136 HSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWS 195

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
             A+   + M+  G +K D    T++L AC+ +G +D+G  + D       +I A +  S
Sbjct: 196 DGAIILLQQMEKEG-VKLDVVAITSILHACARSGSLDNGKDVHD-------YIKANNMAS 247

Query: 630 ------CMLDLLGRAGYLDEAERVINSQ-------------HIQARSDNWWALFSACAAH 670
                  ++D+  + G ++ A  V ++               ++  S     +  ACA+ 
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASL 307

Query: 671 GNLRLGRIIAGLLL 684
             L  G+ I G +L
Sbjct: 308 SALERGKEIHGYIL 321



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 87/227 (38%), Gaps = 53/227 (23%)

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG---- 583
           +++ YA CGDL    RVF+ M +K+   WN ++S YA+ G+ KE++  FK M + G    
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61

Query: 584 ----------------------------------------------RIKPDQATFTAVLS 597
                                                          I  D AT  +VL 
Sbjct: 62  RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
            C+ +G +  G  +  S+     F    +  + +LD+  + G LD A RV   + +  R+
Sbjct: 122 GCAKSGTLSLGKAVH-SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVF--EKMGERN 178

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
              W    A         G II    +E+E  K  V  + S ++A A
Sbjct: 179 VVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACA 225


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 221/708 (31%), Positives = 346/708 (48%), Gaps = 68/708 (9%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL-KAYPH 93
           G Y++A+ L V+      L+P+  ++   L AC        G  +H Y LR G+  + PH
Sbjct: 140 GCYEEAM-LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VA  ++  Y     L    RV   +                           FD M  R+
Sbjct: 199 VATALIGFY-----LRFDMRVLPLL---------------------------FDLMVVRN 226

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
           +  +NAMI+G  + G     + LF +M   +V+ D  +    +  C + G L+ G+Q+H 
Sbjct: 227 IVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQ 286

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L  K  F   + ++NAL+ MY N G++  + ++FE       D   +N M+   A+ G  
Sbjct: 287 LAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR--DAPLWNSMISAYAAFGCH 344

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV--GYQVHAQAMKSGFEAYTSVSNA 328
           EEA+  F  M    ++  E T V ++S C  L   +  G  +HA  +KSG     S+ NA
Sbjct: 345 EEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNA 404

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            ++MY+    ++    IF R++  DI+SWNTMI   A+  L   A   +  M+   I+P+
Sbjct: 405 LLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPN 464

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            +T  S+LA+   +  ++    IH +V  + I  N  +  AL   Y        A  +F 
Sbjct: 465 SYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE 524

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
               R++I+WN +I                      +  P+  T+   LSS   +++L  
Sbjct: 525 GCPDRDLISWNAMI---------------------XKAEPNSVTIINVLSSFTHLATLPQ 563

Query: 506 GKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           G+ +H YV +   +L   +SL NA IT+YA+CG L  +  +F  + +++ ISWNA+I+ Y
Sbjct: 564 GQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGY 623

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             +G G +A+  F  M + G  +P+  TF +VLSACSH+G ++ G ++F SMV D+   P
Sbjct: 624 GMNGRGSDAMLAFSQMLEDG-FRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTP 682

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
              H SC++DLL R G +DEA   I+S  I+  +  W AL S+C A+ + +  + I   L
Sbjct: 683 ELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKL 742

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            + E      YVLLSN+YA AGLW E   IR  LK  G+ K PG SWI
Sbjct: 743 DKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 790



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 171/603 (28%), Positives = 280/603 (46%), Gaps = 51/603 (8%)

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNA----RDLVSVKRVFSEIQNPD- 122
           ANL+N      L AY     L   P+  NT L L   A      +   K +   IQ  D 
Sbjct: 36  ANLKNDQ--AILSAYTQMESLGVLPN--NTTLPLVLKACAAQNAVERGKSIHRSIQGTDL 91

Query: 123 ---VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
              V   T  +    K G V+ A  VFD M DRD+ ++NAM+ G    G  +  + L RE
Sbjct: 92  MDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVRE 151

Query: 180 MHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCG 237
           M + ++R ++ +  ++L  C+ A  L  GR +H    ++G F     V  ALI  Y    
Sbjct: 152 MGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD 211

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             V    +F+     V + +S+N M+ G   VG   +AL  F  MLV  ++   +T +  
Sbjct: 212 MRVLPL-LFDLM--VVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVA 268

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + AC      ++G Q+H  A+K  F     + NA + MYS+ G ++ +  +F  +  +D 
Sbjct: 269 VQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDA 328

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA-----SSGFIEMVEMIH 409
             WN+MIS YA       A+  ++ MQS G++ DE T   +L+     +SG ++  + +H
Sbjct: 329 PLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKG-KSLH 387

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A V  +G+  +  + NAL+S Y +   ++   +IF  M   +II+WNT+I     N    
Sbjct: 388 AHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRA 447

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           Q  + F  +  SE++P+ YT+   L++C  ++ L  G+ IHGYV+K+++     L  A+ 
Sbjct: 448 QACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALA 507

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y  CGD   +  +F    ++D ISWNA+I                       + +P+ 
Sbjct: 508 DMYMNCGDEATARDLFEGCPDRDLISWNAMIX----------------------KAEPNS 545

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED--HLSCMLDLLGRAGYLDEAERV 647
            T   VLS+ +H   +  G  +  + V   GF    D    +  + +  R G L  AE +
Sbjct: 546 VTIINVLSSFTHLATLPQGQSLH-AYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENI 604

Query: 648 INS 650
             +
Sbjct: 605 FKT 607



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 149/599 (24%), Positives = 254/599 (42%), Gaps = 125/599 (20%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF-GNQLHAYALRAGLKAYPH 93
           G +++A+ LF+++ S   +K D  ++   L+ C  L +    G  LHA+ +++G++    
Sbjct: 342 GCHEEAMDLFIRMQS-EGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDAS 400

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + N +LS+Y     + SV+++F  ++  D+ SW T + A  +      ACE+F++M +  
Sbjct: 401 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRES- 459

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                                         +++ ++Y+  S+L+ C D   L+FGR +H 
Sbjct: 460 ------------------------------EIKPNSYTIISILAACEDVTCLDFGRSIHG 489

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            V K        +  AL  MY NCG+   A  +FE       D IS+N M          
Sbjct: 490 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDR--DLISWNAM---------- 537

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSA----CLCPRVGYQVHAQAMKSGFE--AYTSVS 326
                      +    P+ +T ++V+S+       P+ G  +HA   + GF      S++
Sbjct: 538 -----------IXKAEPNSVTIINVLSSFTHLATLPQ-GQSLHAYVTRRGFSLGLDLSLA 585

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA ITMY+ CG +  A  IF  L +++I+SWN MI+ Y     G  A+LA+ +M   G R
Sbjct: 586 NAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFR 645

Query: 387 PDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+  TF S+L++   SGFIEM +++ H+ V    +   +   + ++   A+   I +A +
Sbjct: 646 PNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEARE 705

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
              +M                    P++              PD       LSSC   S 
Sbjct: 706 FIDSM--------------------PIE--------------PDASVWRALLSSCRAYSD 731

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMI--TLYAKCGDLDCSLRVFNMMIEK-----DTIS 555
            +  K I   + K   +  M+ GN ++   +YA  G      R+   + EK       IS
Sbjct: 732 AKQAKTIFEKLDK---LEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGIS 788

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ--ATFTAVLSACSHAGLVDDGTRIF 612
           W  +          K  V CF A  D    + D+  A  + +LS+    G   D   +F
Sbjct: 789 WIIV----------KNQVHCFSA-GDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVF 836



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 21/382 (5%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           D   +N ++   A++   +  L  +  M    + P+  T   V+ AC        G  +H
Sbjct: 24  DPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIH 83

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
                +       V  A +  Y  CG +++A  +F  + ++D+V WN M+  Y       
Sbjct: 84  RSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYE 143

Query: 372 SAILAYLEMQSVGIRPDEFTFGS-LLASSGFIEMV--EMIHAFVFINGII-TNIQVSNAL 427
            A+L   EM    +RP+  T  + LLA  G  E+     +H +   NG+  +N  V+ AL
Sbjct: 144 EAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATAL 203

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y + + ++    +F  M  RNI++WN +I+G+   G   + L+ F ++L+ E++ D 
Sbjct: 204 IGFYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDC 262

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+ VA+ +CA + SL+ GKQIH   +K   +  + + NA++ +Y+  G L+ S ++F  
Sbjct: 263 VTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFES 322

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS------- 600
           +  +D   WN++ISAYA  G  +EA+  F  MQ  G +K D+ T   +LS C        
Sbjct: 323 VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG-VKKDERTVVIMLSMCEELASGLL 381

Query: 601 -----HAGLVDDGTRIFDSMVN 617
                HA ++  G RI  S+ N
Sbjct: 382 KGKSLHAHVIKSGMRIDASLGN 403



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 166/329 (50%), Gaps = 10/329 (3%)

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
           ++Q KD   WN++I   A     ++ + AY +M+S+G+ P+  T   +L   A+   +E 
Sbjct: 19  KIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER 78

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + IH  +    ++ +++V  A++  Y K   ++ A  +F  MS R+++ WN ++ G++ 
Sbjct: 79  GKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI-SKMS 523
            G   + +    E+    LRP+  T+   L +C   S LR G+ +HGY L+N +  S   
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +  A+I  Y +  D+     +F++M+ ++ +SWNA+IS Y   G+  +A+  F  M  V 
Sbjct: 199 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQML-VD 256

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            +K D  T    + AC+  G +  G +I    +  + F+     L+ +L++    G L+ 
Sbjct: 257 EVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIK-FEFVEDLYILNALLNMYSNNGSLES 315

Query: 644 AERVINSQHIQARSDNWW-ALFSACAAHG 671
           + ++  S  +  R    W ++ SA AA G
Sbjct: 316 SHQLFES--VPNRDAPLWNSMISAYAAFG 342


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 205/626 (32%), Positives = 328/626 (52%), Gaps = 19/626 (3%)

Query: 122  DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
            D+Y  +  +S   + G  D A  +F++M  R++   N ++ G  +    +    +F EM 
Sbjct: 789  DLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK 848

Query: 182  KL-DVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSGFS-CLVSVVNALITMYFN 235
             L  +  D+Y    S  S  SV + G  + GR++H+ V ++G +   V++ N L+ MY  
Sbjct: 849  DLVGINSDSYVVLLSAFSEFSVLEEGRRK-GREVHAHVIRTGLNDNKVAIGNGLVNMYAK 907

Query: 236  CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
             G + DAC VFE       D +S+N ++ GL      E+A   F  M      PS  T +
Sbjct: 908  SGAIADACSVFELMVEK--DSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLI 965

Query: 296  SVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
            S +S+C       +G Q+H   +K G +   SVSNA + +Y+  G   E   +F+ + E 
Sbjct: 966  STLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEY 1025

Query: 353  DIVSWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
            D VSWN++I   +      S A+  +LEM   G      TF ++L++   + + E+   I
Sbjct: 1026 DQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 1085

Query: 409  HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGF 467
            HA V    +  +  + NAL+S Y K   + +  +IF  MS  R+ ++WN++I+G++ N  
Sbjct: 1086 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNEL 1145

Query: 468  PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
              + +     ++    R D +T +  LS+CA +++L  G ++H   ++  + S + +G+A
Sbjct: 1146 LHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSA 1205

Query: 528  MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            ++ +Y+KCG +D + R F +M  ++  SWN++IS YA+HG G++A+  F  M   G+   
Sbjct: 1206 LVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPD 1265

Query: 588  DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
              A    VLSACSH G V++G   F SM   Y   P  +H SCM+DLLGRAG LDE    
Sbjct: 1266 HVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDF 1325

Query: 648  INSQHIQARSDNWWALFSACA-AHG-NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            INS  ++     W  +  AC  A+G N  LGR  A +LLE E      YVLL+N+YA+  
Sbjct: 1326 INSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGE 1385

Query: 706  LWEEAANIRELLKRTGVIKQPGCSWI 731
             WE+ A  R  +K   V K+ GCSW+
Sbjct: 1386 KWEDVAKARXAMKEAAVKKEAGCSWV 1411



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 284/595 (47%), Gaps = 62/595 (10%)

Query: 78   QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +LH  +++ G      ++NT++++Y    DL S +++F E+ N ++ +W   +S  T+ G
Sbjct: 565  ELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNG 624

Query: 138  HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
              D AC                                 FR+M +     ++Y+F S L 
Sbjct: 625  KPDEAC-------------------------------ARFRDMVRAGFIPNHYAFGSALR 653

Query: 198  VC-DAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC-GNVVDACKVFEEAKGYV 253
             C ++G    + G Q+H L++K+ +   V V N LI+MY +C  +  DA  VF+     +
Sbjct: 654  ACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIG--I 711

Query: 254  CDHISYNVMMDGLASVGRVEEALIRFRDM----LVASLRPSELTFVSVMSACLCPRVGY- 308
             + IS+N ++   +  G    A   F  M    L  S +P+E TF S+++A  C  V + 
Sbjct: 712  RNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAA-CSSVDFG 770

Query: 309  -----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
                 Q+ A+  KSGF     V +A ++ ++  G  D+A  IF ++  +++VS N ++  
Sbjct: 771  LCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVG 830

Query: 364  YAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVE-------MIHAFVFIN 415
              ++  G +A   + EM+  VGI  D +    LL++     ++E        +HA V   
Sbjct: 831  LVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRT 888

Query: 416  GIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G+  N + + N L++ YAK+  I  A  +F  M  ++ ++WN+LI+G   N       + 
Sbjct: 889  GLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAES 948

Query: 475  FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
            F  +  +   P  +TL   LSSCA +  +  G+QIH   LK  L + +S+ NA++ LYA+
Sbjct: 949  FLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAE 1008

Query: 535  CGDLDCSLRVFNMMIEKDTISWNALISAYAQ-HGEGKEAVSCFKAMQDVGRIKPDQATFT 593
             G     L+VF++M E D +SWN++I A +       +AV  F  M   G     + TF 
Sbjct: 1009 TGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMR-GGWGLSRVTFI 1067

Query: 594  AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             +LSA S   L +   +I  ++V  Y         + +L   G+ G ++E E++ 
Sbjct: 1068 NILSAVSSLSLHEVSHQI-HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIF 1121



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 227/430 (52%), Gaps = 30/430 (6%)

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           E  R+LH    K GF   + + N LI +Y   G++  A K+F+E      + +++  ++ 
Sbjct: 561 EEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNR--NLVTWACLIS 618

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL------CPRVGYQVHAQAMKSG 318
           G    G+ +EA  RFRDM+ A   P+   F S + AC       C ++G Q+H    K+ 
Sbjct: 619 GYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGC-KLGVQIHGLISKTR 677

Query: 319 FEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           + +   V N  I+MY SC    ++A  +F R+  ++ +SWN++IS Y++R    SA   +
Sbjct: 678 YGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLF 737

Query: 378 LEMQSVGI----RPDEFTFGSLLASS------GFIEMVEMIHAFVFINGIITNIQVSNAL 427
             MQ  G+    +P+E+TFGSL+ ++      G   + +M+ A V  +G + ++ V +AL
Sbjct: 738 SSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQML-ARVEKSGFLQDLYVGSAL 796

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPD 486
           +S +A+      A  IF  M  RN+++ N L+ G +         + F E+  +  +  D
Sbjct: 797 VSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 856

Query: 487 EYTLSVALSSCARISSL----RHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCS 541
            Y   V LS+ +  S L    R G+++H +V++  L  +K+++GN ++ +YAK G +  +
Sbjct: 857 SYV--VLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADA 914

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF +M+EKD++SWN+LIS   Q+   ++A   F  M+  G + P   T  + LS+C+ 
Sbjct: 915 CSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSM-PSNFTLISTLSSCAS 973

Query: 602 AGLVDDGTRI 611
            G +  G +I
Sbjct: 974 LGWIMLGEQI 983



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 119/472 (25%), Positives = 210/472 (44%), Gaps = 44/472 (9%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N  ++ L ++   +DA   F+++  +  + P  ++L +TL++CA+L     G Q+H   L
Sbjct: 930  NSLISGLDQNECSEDAAESFLRMRRTGSM-PSNFTLISTLSSCASLGWIMLGEQIHCDGL 988

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            + GL     V+N +L+LY          +VFS +   D  SW + + A            
Sbjct: 989  KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGA------------ 1036

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
                + D +  V  A              +  F EM +        +F ++LS V    L
Sbjct: 1037 ----LSDSEASVSQA--------------VKYFLEMMRGGWGLSRVTFINILSAVSSLSL 1078

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             E   Q+H+LV K   S   ++ NAL++ Y  CG + +  K+F        D +S+N M+
Sbjct: 1079 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARM-SETRDEVSWNSMI 1137

Query: 264  DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             G      + +A+     M+    R    TF +V+SAC        G +VHA  +++  E
Sbjct: 1138 SGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACME 1197

Query: 321  AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            +   V +A + MYS CG+ID A   F  +  +++ SWN+MIS YA+   G  A+  +  M
Sbjct: 1198 SDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRM 1257

Query: 381  QSVGIRPDEFT--FGSLLASS--GFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNE 435
               G  PD      G L A S  GF+E   E   +   +  +   ++  + ++    +  
Sbjct: 1258 MLDGQPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAG 1317

Query: 436  RIKQAYQIFHNMSPR-NIITWNTLINGFL-LNGFPVQGLQHFSELLMSELRP 485
            ++ +     ++M  + N++ W T++      NG   +  +  +E+L+ EL P
Sbjct: 1318 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLL-ELEP 1368



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 128/249 (51%), Gaps = 13/249 (5%)

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G + N+ +SN LI+ Y +   +  A ++F  MS RN++TW  LI+G+  NG P +    F
Sbjct: 574 GFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARF 633

Query: 476 SELLMSELRPDEYTLSVALSSCAR--ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            +++ +   P+ Y    AL +C     S  + G QIHG + K    S + + N +I++Y 
Sbjct: 634 RDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYG 693

Query: 534 KCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG---RIKPDQ 589
            C D     R VF+ +  +++ISWN++IS Y++ G+   A   F +MQ  G     KP++
Sbjct: 694 SCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNE 753

Query: 590 ATFTAVLS-ACSHAGLVDDGTRIFDSM---VNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            TF ++++ ACS    VD G  + + M   V   GF+      S ++    R G  D+A+
Sbjct: 754 YTFGSLITAACSS---VDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAK 810

Query: 646 RVINSQHIQ 654
            +     ++
Sbjct: 811 NIFEQMGVR 819



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 161/344 (46%), Gaps = 23/344 (6%)

Query: 285 ASLRPSELTFVSVMS---ACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            +L  S  TF S+++      C     ++H Q++K GF     +SN  I +Y   G +  
Sbjct: 538 TTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGS 597

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----- 396
           A  +F  +  +++V+W  +IS Y Q      A   + +M   G  P+ + FGS L     
Sbjct: 598 AQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQE 657

Query: 397 -ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN-ERIKQAYQIFHNMSPRNIIT 454
              SG  ++   IH  +      +++ V N LIS Y    +    A  +F  +  RN I+
Sbjct: 658 SGPSG-CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSIS 716

Query: 455 WNTLINGFLLNGFPVQGLQHFS----ELLMSELRPDEYTLSVALSSCARISSLRHG---- 506
           WN++I+ +   G  V     FS    E L    +P+EYT    ++  A  SS+  G    
Sbjct: 717 WNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT--AACSSVDFGLCVL 774

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +Q+   V K+  +  + +G+A+++ +A+ G  D +  +F  M  ++ +S N L+    + 
Sbjct: 775 EQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQ 834

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            +G+ A   F  M+D+  I  D  ++  +LSA S   ++++G R
Sbjct: 835 KQGEAAAKVFHEMKDLVGINSD--SYVVLLSAFSEFSVLEEGRR 876


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 221/719 (30%), Positives = 349/719 (48%), Gaps = 50/719 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +LS  L  C +          H YA + GL     VA  ++++Y     +   K +F E+
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDRDLPVYNAMITG--------- 163
              DV  W   L A  +MG  + A ++          P+       A I+G         
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK 266

Query: 164 ----------CTENGYEDIGIG-------------LFREMHKLDVRRDNYSFASVLSVC- 199
                      +E  + + G+               F +M + DV  D  +F  +L+   
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L  G+Q+H +  K G   +++V N+LI MY        A  VF+       D IS+
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER--DLISW 384

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM 315
           N ++ G+A  G   EA+  F  +L   L+P + T  SV+ A      G     QVH  A+
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K    + + VS A I  YS    + EA ++F R    D+V+WN M++ Y Q + G   + 
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLK 503

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  M   G R D+FT  ++  + GF   I   + +HA+   +G   ++ VS+ ++  Y 
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +  A   F ++   + + W T+I+G + NG   +    FS++ +  + PDE+T++ 
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
              + + +++L  G+QIH   LK N  +   +G +++ +YAKCG +D +  +F  +   +
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
             +WNA++   AQHGEGKE +  FK M+ +G IKPD+ TF  VLSACSH+GLV +  +  
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGLVSEAYKHM 742

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            SM  DYG  P  +H SC+ D LGRAG + +AE +I S  ++A +  +  L +AC   G+
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              G+ +A  LLE E    S YVLLSN+YAAA  W+E    R ++K   V K PG SWI
Sbjct: 803 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 171/670 (25%), Positives = 275/670 (41%), Gaps = 91/670 (13%)

Query: 12  GNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR 71
           GN  +S   ++  N  L+    SG Y   L  F  +  S  ++ D  +    LA    + 
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVD 329

Query: 72  NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
           + A G Q+H  AL+ GL     V+N+++++Y   R                         
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR------------------------- 364

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
              K G   +A  VFD M +RDL  +N++I G  +NG E   + LF ++ +  ++ D Y+
Sbjct: 365 ---KFG---FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 192 FASVLSVCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
             SVL    +    L   +Q+H    K        V  ALI  Y     + +A  +FE  
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER- 477

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRV 306
             +  D +++N MM G        + L  F  M     R  + T  +V   C        
Sbjct: 478 --HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G QVHA A+KSG++    VS+  + MY  CG +  A   F  +   D V+W TMIS   +
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQV 423
                 A   + +M+ +G+ PDEFT  +L  +S  +  +E    IHA         +  V
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
             +L+  YAK   I  AY +F  +   NI  WN ++ G   +G   + LQ F ++    +
Sbjct: 656 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI 715

Query: 484 RPDEYTLSVALSSCAR----ISSLRHGKQIHG-YVLK----------------------N 516
           +PD+ T    LS+C+       + +H + +HG Y +K                       
Sbjct: 716 KPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAE 775

Query: 517 NLISKMSL---GNAMITLYAKC---GDLDCSLRVFNMMIEKDTISWNALI---SAYAQHG 567
           NLI  MS+    +   TL A C   GD +   RV   ++E + +  +A +   + YA   
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT--------RIFDSMVNDY 619
           +  E +   + M    ++K D       +    H  +VDD +        R    M+ D 
Sbjct: 836 KWDE-MKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894

Query: 620 ---GFIPAED 626
              G++P  D
Sbjct: 895 KQEGYVPETD 904



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 137/574 (23%), Positives = 254/574 (44%), Gaps = 53/574 (9%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG---CTENGY 169
           R+ +  +NP+ +     +S  +K G + YA  VFDKMPDRDL  +N+++      +E   
Sbjct: 64  RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123

Query: 170 EDI--GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV 226
           E+I     LFR + +  V     + + +L +C  +G +      H    K G      V 
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            AL+ +Y   G V +   +FEE      D + +N+M+     +G  EEA+        + 
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241

Query: 287 LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           L P+E+T           R+  ++      +G     +  N A ++              
Sbjct: 242 LNPNEITL----------RLLARISGDDSDAGQVKSFANGNDASSV-------------- 277

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV- 405
                 +I+  N  +S Y       + +  + +M    +  D+ TF  +LA++  ++ + 
Sbjct: 278 -----SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332

Query: 406 --EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             + +H      G+   + VSN+LI+ Y K  +   A  +F NMS R++I+WN++I G  
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI-SSLRHGKQIHGYVLKNNLISKM 522
            NG  V+ +  F +LL   L+PD+YT++  L + + +   L   KQ+H + +K N +S  
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAM 579
            +  A+I  Y++    +  ++   ++ E+   D ++WNA+++ Y Q  +G + +  F  M
Sbjct: 453 FVSTALIDAYSR----NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
              G  + D  T   V   C     ++ G ++    +   G+       S +LD+  + G
Sbjct: 509 HKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCG 566

Query: 640 YLDEAERVINSQHIQARSD-NWWALFSACAAHGN 672
            +  A+   +S  I    D  W  + S C  +G 
Sbjct: 567 DMSAAQFAFDS--IPVPDDVAWTTMISGCIENGE 598



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 8/111 (7%)

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           S L  GK  H  +L      +  L N +I++Y+KCG L  + RVF+ M ++D +SWN+++
Sbjct: 53  SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112

Query: 561 SAYAQHGEG-----KEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLV 605
           +AYAQ  E      ++A   F+ + QDV  +   + T + +L  C H+G V
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYV 161


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 177/482 (36%), Positives = 276/482 (57%), Gaps = 8/482 (1%)

Query: 258 SYNVMMDGLASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           S+NVM+ GL++   +   AL  +  M    L+P+ LT+  +  AC   L    G   H  
Sbjct: 93  SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ G +    VS++ ITMY+ CGK+ +A  +F  + +KD+VSWN+MIS Y++      A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           +  + EM   G +P+E +  S+L + G +  +++   +  FV  N +  N  + +ALI  
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A +IF +M  ++ +TWN +I G+  NG   + ++ F ++ MS   PD+ TL
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              LS+CA I +L  GKQ+  Y  +      + +G A++ +YAKCG LD + RVF  M +
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPK 392

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKA-MQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           K+ +SWNA+ISA A HG+ +EA++ FK+ M + G + P+  TF  VLSAC HAGLVD+G 
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R+F  M + +G +P  +H SCM+DL  RAG+L+EA   + +   +       AL  AC  
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQK 512

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
             N+ +   +  LLLE E      YV+ S +YA    W+++A +R L+K+ GV K PGCS
Sbjct: 513 RKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572

Query: 730 WI 731
           WI
Sbjct: 573 WI 574



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 230/476 (48%), Gaps = 16/476 (3%)

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           SL +    +  +K++ +++    ++   +FL     +    YA   F  + D     +N 
Sbjct: 37  SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNV 96

Query: 160 MITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKS 217
           MI G  T      + +  +  M  L ++ +N ++  +   C   L +E GR  H  V + 
Sbjct: 97  MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G      V ++LITMY  CG + DA KVF+E      D +S+N M+ G + +    EA+ 
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--DLVSWNSMISGYSKMRHAGEAVG 214

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            FR+M+ A  +P+E++ VSV+ AC      ++G  V    +++       + +A I MY 
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG +  A  IF  +++KD V+WN MI+ YAQ  +   AI  + +M+     PD+ T   
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   AS G +++ + +  +    G   ++ V  AL+  YAK   +  A+++F+ M  +N
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKN 394

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYTLSVALSSCARISSLRHGKQ 508
            ++WN +I+    +G   + L  F   +M+E   + P++ T    LS+C     +  G++
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKS-MMNEGGTVSPNDITFVGVLSACVHAGLVDEGRR 453

Query: 509 I-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISA 562
           + H       L+ K+   + M+ L+++ G L+ +      M EK D +   AL+ A
Sbjct: 454 LFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 228/511 (44%), Gaps = 82/511 (16%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           LKP+  +      AC+NL     G   H   +R GL    HV+++++++Y     +   +
Sbjct: 123 LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDAR 182

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +VF EI   D+ SW + +S  +KM H   A                              
Sbjct: 183 KVFDEISQKDLVSWNSMISGYSKMRHAGEA------------------------------ 212

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +GLFREM +   + +  S  SVL  C + G L+ G  +   V ++  +    + +ALI 
Sbjct: 213 -VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIH 271

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG++V A ++F+  K    D +++N M+ G A  G  EEA+  F+DM ++S  P +
Sbjct: 272 MYGKCGDLVSARRIFDSMKKK--DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQ 329

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T + ++SAC       +G QV   A + GF+    V  A + MY+ CG +D A  +F  
Sbjct: 330 ITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYG 389

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLAS---SGFI- 402
           + +K+ VSWN MIS  A     + A+  +  M + G  + P++ TF  +L++   +G + 
Sbjct: 390 MPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E   + H      G++  I+  + ++  +++   +++A+     M               
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPE------------- 496

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
                                +PDE  L   L +C +  ++   +++   +L+   +   
Sbjct: 497 ---------------------KPDEVILGALLGACQKRKNIDISERVMKLLLE---LEPS 532

Query: 523 SLGNAMIT--LYAKCGDLDCSLRVFNMMIEK 551
           + GN +I+  LYA     D S R+  +M +K
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQK 563


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 191/613 (31%), Positives = 313/613 (51%), Gaps = 7/613 (1%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PDV      L    K G +  A ++FD+MP +++  +   I+GCT NG  +    +F +M
Sbjct: 68  PDVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADM 127

Query: 181 HKLDVRRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            +  V  ++++  + L+ C A        Q+HSL  ++GF+    + + LI +Y  CG++
Sbjct: 128 LESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSL 187

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A +VF   +    D + Y  ++  L   G +  A+     M    L+P+E T  S+++
Sbjct: 188 RAAEEVFRRMEAP--DVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLA 245

Query: 300 ACLCPR-VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
            C  PR +G Q+H   +K         S A I  YS  G    A  +F  L+ K++VSW 
Sbjct: 246 EC--PRGIGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWC 303

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
           +M+    +      A+  + EM S G++P+EF F   L++ G + +   IH       ++
Sbjct: 304 SMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLM 363

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           T+I+VSNAL+S Y ++  + +   +   +   ++++W   I+    NGF  + +    ++
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 423

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
                 P++Y  S  LSSCA ++ L  G+Q+H   LK     K+  GNA+I +Y+KCG +
Sbjct: 424 HSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRI 483

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +   F++M   D +SWN+LI   AQHG+   A+  F  M      +PD +TF +VL  
Sbjct: 484 GSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCS-SDWRPDDSTFLSVLVG 542

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+HAGLV +G   F  M + YG  P   H +CM+D+LGR G   EA R+I +   +    
Sbjct: 543 CNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVL 602

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L ++C  H NL +G++ A  L+E  +   + YVL+SN+YA    W +A  +R  + 
Sbjct: 603 IWKTLLASCKLHRNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMD 662

Query: 719 RTGVIKQPGCSWI 731
             GV K  G SWI
Sbjct: 663 EIGVKKDAGWSWI 675



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 248/547 (45%), Gaps = 46/547 (8%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++  +R+G  + A  +F  +  S  + P+ ++ +  LAACA       G Q+H+ A+RA
Sbjct: 107 AISGCTRNGRPEAAATMFADMLES-GVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA 165

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G  A   + + ++ LY     L + + VF  ++ PDV  +T+ +SA  + G +  A +V 
Sbjct: 166 GFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVL 225

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF 206
            +M               T  G +                 + ++  S+L+ C  G+   
Sbjct: 226 CQM---------------TRQGLQP----------------NEHTMTSMLAECPRGI--- 251

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMD 264
           G Q+H  + K   S  V    ALI  Y   G+   A  VFE  E+K  V    S+  MM 
Sbjct: 252 GEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVV----SWCSMMQ 307

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
                GR+++AL  F +M+   ++P+E  F   +SAC    +G Q+H  A+K        
Sbjct: 308 LCIRDGRLDDALRVFSEMISEGVQPNEFAFSIALSACGSVCLGRQIHCSAIKRDLMTDIR 367

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           VSNA ++MY   G + E   +  +++  D+VSW   IS   Q      A+   L+M S G
Sbjct: 368 VSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEG 427

Query: 385 IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             P+++ F S L+S   + ++     +H      G    +   NALI+ Y+K  RI  A 
Sbjct: 428 FTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSAR 487

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
             F  M   ++++WN+LI+G   +G     L+ FSE+  S+ RPD+ T    L  C    
Sbjct: 488 LAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAG 547

Query: 502 SLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNAL 559
            ++ G+     +  +  L    S    MI +  + G    +LR+  NM  E D + W  L
Sbjct: 548 LVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTL 607

Query: 560 ISAYAQH 566
           +++   H
Sbjct: 608 LASCKLH 614


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 198/620 (31%), Positives = 324/620 (52%), Gaps = 16/620 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +     L+   K+G +  A  +FD MP+R++  +  ++ G    G  +   GLFR + 
Sbjct: 83  DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142

Query: 182 KLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           +     +++   ++L V    DA  L     +H+   K G      V ++LI  Y  CG 
Sbjct: 143 REGHEVNHFVLTTILKVLVAMDAPGLTCC--IHACACKLGHDRNAFVGSSLIDAYSLCGA 200

Query: 239 VVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           V  A  VF+   G +  D +++  M+   +     E+AL  F  M +A  +P+     SV
Sbjct: 201 VSHARCVFD---GIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSV 257

Query: 298 MSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + A +C     +G  +H  A+K+  +    V  A + MY+ CG I++A  +F  +   D+
Sbjct: 258 LKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDV 317

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAF 411
           + W+ +IS YAQ      A   +L M    + P+EF+   +L   A+  F+++ + IH  
Sbjct: 318 ILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNL 377

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V   G  + + V NAL+  YAK   ++ + +IF ++   N ++WNT+I G+  +GF    
Sbjct: 378 VIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDA 437

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+  + +   + T S  L +CA  +S++H  QIH  + K+   +   + N++I  
Sbjct: 438 LSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDT 497

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG +  +L+VF  +I+ D +SWNA+IS YA HG   +A+  F  M      KP+  T
Sbjct: 498 YAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNK-SDTKPNDVT 556

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F A+LS C   GLV+ G  +F+SM  D+   P+ DH +C++ LLGRAG L++A + I   
Sbjct: 557 FVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDI 616

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
                   W AL S+C  H N+ LG+  A  +LE E    + YVLLSN+YAAAG+ ++ A
Sbjct: 617 PSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVA 676

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            +R+ ++  GV K+ G SW+
Sbjct: 677 LLRKSMRNIGVKKEVGLSWV 696



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 214/468 (45%), Gaps = 45/468 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           +DAL+ F ++  +   KP+ + L++ L A   L +A  G  +H  A++      PHV   
Sbjct: 233 EDALNTFSKMRMAGA-KPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGA 291

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L +Y     +   + VF  I + DV  W+  +S                    R    Y
Sbjct: 292 LLDMYAKCGYIEDARTVFEIIPHDDVILWSFLIS--------------------RYAQSY 331

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTK 216
                   E  +E     +F  M +  V  + +S + VL  C +   L+ G+Q+H+LV K
Sbjct: 332 Q------NEQAFE-----MFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIK 380

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G+   + V NAL+ +Y  C N+ ++ ++F   +    + +S+N ++ G    G  E+AL
Sbjct: 381 LGYESELFVGNALMDVYAKCRNMENSLEIFRSLRD--ANEVSWNTIIVGYCQSGFAEDAL 438

Query: 277 IRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F++M  A +  +++TF SV+ AC      +   Q+H+   KS F   T V N+ I  Y
Sbjct: 439 SVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTY 498

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG I +A  +F  + + D+VSWN +IS YA       A+  +  M     +P++ TF 
Sbjct: 499 AKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFV 558

Query: 394 SLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-S 448
           +LL+  G   +V     + ++    + I  ++     ++    +  R+  A +   ++ S
Sbjct: 559 ALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPS 618

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             + + W  L++  +++     G   FS   + E+ P + T  V LS+
Sbjct: 619 TPSPMVWRALLSSCVVHKNVALG--KFSAEKVLEIEPQDETTYVLLSN 664



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 182/397 (45%), Gaps = 58/397 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  ++S   + A  +F+++  S  + P+ +SLS  L ACAN+     G Q+H   ++ G
Sbjct: 324 ISRYAQSYQNEQAFEMFLRMMRS-SVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLG 382

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V N ++ +Y   R++ +   +F  +++ +  SW                     
Sbjct: 383 YESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSW--------------------- 421

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                     N +I G  ++G+ +  + +F+EM    V     +F+SVL  C +   ++ 
Sbjct: 422 ----------NTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKH 471

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
             Q+HSL+ KS F+    V N+LI  Y  CG + DA KVFE      CD +S+N ++ G 
Sbjct: 472 TVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI--IQCDVVSWNAIISGY 529

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAMKSG 318
           A  GR  +AL  F  M  +  +P+++TFV+++S C    +  Q             +K  
Sbjct: 530 ALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPS 589

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMIST---YAQRNLGRSAI 374
            + YT +    + +    G++++A      +      + W  ++S+   +    LG+ + 
Sbjct: 590 MDHYTCI----VRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSA 645

Query: 375 LAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMI 408
              LE++      DE T+    ++ A++G ++ V ++
Sbjct: 646 EKVLEIEP----QDETTYVLLSNMYAAAGILDQVALL 678



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    +SG  +DAL +F ++ ++H L   + + S+ L ACAN  +     Q+H+   
Sbjct: 422 NTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQV-TFSSVLRACANTASIKHTVQIHSLIE 480

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++       V N+++  Y     +    +VF  I   DV SW   +S     G    A E
Sbjct: 481 KSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALE 540

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
           +F++M   D       + A+++ C   G  + G+ LF  M   H++    D+Y+
Sbjct: 541 LFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYT 594



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 114/290 (39%), Gaps = 37/290 (12%)

Query: 471 GLQHFSELLMSELRP--DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL--GN 526
            LQ   + L S   P  D Y  +  L  C      R G+ +H  V++   ++++     N
Sbjct: 29  ALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCAN 88

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR-- 584
            ++ LYAK G L  + R+F+ M E++ +S+  L+  YA  G  +EA   F+ +Q  G   
Sbjct: 89  VLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEV 148

Query: 585 ------------IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
                       +  D    T  + AC+     D    +  S+++ Y    A  H  C+ 
Sbjct: 149 NHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVF 208

Query: 633 DLL---------------GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR--- 674
           D +                     ++A    +   +     N + L S   A   L    
Sbjct: 209 DGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAV 268

Query: 675 LGRIIAGLLLEREQD-KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
           LG+ I G  ++   D +P V   L ++YA  G  E+A  + E++    VI
Sbjct: 269 LGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVI 318


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 208/704 (29%), Positives = 348/704 (49%), Gaps = 41/704 (5%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP- 92
           +GH ++ L+++  +  +  L     +++T +  C    +   G Q+    +++GL     
Sbjct: 328 NGHTKEVLNIYRHLRHN-GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSV 386

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VAN+++S++ N                                  V+ A  VF+ M +R
Sbjct: 387 SVANSLISMFGNYDS-------------------------------VEEASRVFNNMQER 415

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
           D   +N++IT    NG  +  +G F  M +   + D  + +++L  C  A  L++GR LH
Sbjct: 416 DTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLH 475

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L+TKSG    V V N+L++MY   G+  DA  VF        D IS+N MM      G+
Sbjct: 476 GLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR--DLISWNSMMASHVEDGK 533

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
              A++   +ML      + +TF + +SAC        VHA  +         + N  +T
Sbjct: 534 YSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVT 593

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY   G +DEA  +   + E+D+V+WN +I  +A      + I A+  M+  G+  +  T
Sbjct: 594 MYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYIT 653

Query: 392 ----FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
                G+ ++    ++    IHA + + G   +  V ++LI+ YA+   +  +  IF  +
Sbjct: 654 IVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVL 713

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           + +N  TWN + +     G   + L+  + +    +  D+++ SVAL++   ++ L  G+
Sbjct: 714 ANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQ 773

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+H +++K        + NA + +Y KCG++D   R+  +   +   SWN LISA A+HG
Sbjct: 774 QLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHG 833

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
             ++A   F  M D+G +KPD  TF ++LSACSH GLVD+G   F SM +++G   A +H
Sbjct: 834 FFRQATEAFHEMLDLG-LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEH 892

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
             C++DLLGR+G L EAE  I+   +      W +L +AC  HGNL LGR  A  L E  
Sbjct: 893 CVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELN 952

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
               S YVL SN+ A+   W +  N+R+ ++   + K+P CSWI
Sbjct: 953 SSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWI 996



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 175/657 (26%), Positives = 322/657 (49%), Gaps = 44/657 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG-NQLHAYA 83
           N  ++   R G Y  A+  F  +  +  + P  Y +++ + AC        G  Q+H Y 
Sbjct: 217 NNMISGFVRVGWYHKAMQFFCHMFEN-GVTPSSYVIASMVTACDRSGCMTEGARQIHGYV 275

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ GL +   V  ++L  Y     +    ++F EI+ P++ SWT+ +      GH     
Sbjct: 276 VKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVL 335

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
            ++  +       +N +I  CT N                       + A+V+  C   G
Sbjct: 336 NIYRHLR------HNGLI--CTGN-----------------------TMATVIRTCGMFG 364

Query: 203 LLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
               G Q+   V KSG  +  VSV N+LI+M+ N  +V +A +VF   +    D IS+N 
Sbjct: 365 DKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQER--DTISWNS 422

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           ++   A  GR EE+L  F  M     +   +T  +++ AC      + G  +H    KSG
Sbjct: 423 IITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSG 482

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            E+   V N+ ++MY+  G  ++A ++F  +  +D++SWN+M++++ +      AIL  +
Sbjct: 483 LESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLV 542

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           EM       +  TF + L++   +E ++++HAFV    +  N+ + N L++ Y K   + 
Sbjct: 543 EMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMD 602

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +A ++   M  R+++TWN LI G   +  P   +Q F+ +    L  +  T+   L +C 
Sbjct: 603 EAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCM 662

Query: 499 RISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
                L+HG  IH +++         + +++IT+YA+CGDL+ S  +F+++  K++ +WN
Sbjct: 663 SPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWN 722

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+ SA A +G G+EA+     M++ G +  DQ +F+  L+   +  ++D+G ++  S + 
Sbjct: 723 AIFSANAHYGPGEEALKFIARMRNDG-VDLDQFSFSVALATIGNLTVLDEGQQL-HSWII 780

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
             GF   E  L+  +D+ G+ G +D+  R++    I+++  +W  L SA A HG  R
Sbjct: 781 KLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKR-SWNILISALARHGFFR 836



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 155/564 (27%), Positives = 278/564 (49%), Gaps = 19/564 (3%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           IQ    Y+  T ++  +K G + YA  VFDKM DR+   +N MI+G    G+    +  F
Sbjct: 178 IQQNTFYT-NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFF 236

Query: 178 REMHKLDVRRDNYSFASVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
             M +  V   +Y  AS+++ CD    + E  RQ+H  V K G    V V  +L+  Y  
Sbjct: 237 CHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGT 296

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
            G+V +A K+FEE +    + +S+  +M   A  G  +E L  +R +    L  +  T  
Sbjct: 297 HGSVSEANKLFEEIEE--PNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMA 354

Query: 296 SVMSACLC---PRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQE 351
           +V+  C       +GYQ+    +KSG +  + SV+N+ I+M+ +   ++EA  +F  +QE
Sbjct: 355 TVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQE 414

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           +D +SWN++I+  A       ++  +  M+    + D  T  +LL + G  + ++    +
Sbjct: 415 RDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGL 474

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +  +G+ +N+ V N+L+S YA+    + A  +FH M  R++I+WN+++   + +G  
Sbjct: 475 HGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKY 534

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
              +    E+L +    +  T + ALS+C  +  L   K +H +V+   +   + +GN +
Sbjct: 535 SHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTL 591

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +T+Y K G +D + +V  +M E+D ++WNALI  +A   +    +  F  M+  G +  +
Sbjct: 592 VTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLS-N 650

Query: 589 QATFTAVLSAC-SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
             T   +L  C S   L+  G  I   +V   GF       S ++ +  + G L+ +  +
Sbjct: 651 YITIVNLLGTCMSPDYLLKHGMPIHAHIVVA-GFELDTYVQSSLITMYAQCGDLNTSSYI 709

Query: 648 INSQHIQARSDNWWALFSACAAHG 671
            +       S  W A+FSA A +G
Sbjct: 710 FDVL-ANKNSSTWNAIFSANAHYG 732



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 238/503 (47%), Gaps = 29/503 (5%)

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-----GRQLHS 212
           N + T   EN +   GI  F       +R  N+S   V      G  E      G+ LH+
Sbjct: 121 NQLETCVKENEFLSYGIHTF-------IR--NHSNPQVSRFLQKGFSEISEGNVGKALHA 171

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L  K          N L+ MY   G++  A  VF+  K Y  +  S+N M+ G   VG  
Sbjct: 172 LCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFD--KMYDRNDASWNNMISGFVRVGWY 229

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG-YQVHAQAMKSGFEAYTSVSNA 328
            +A+  F  M    + PS     S+++AC    C   G  Q+H   +K G  +   V  +
Sbjct: 230 HKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTS 289

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +  Y + G + EA  +F  ++E +IVSW +++  YA     +  +  Y  ++  G+   
Sbjct: 290 LLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICT 349

Query: 389 EFTFGSLLASSGFI---EMVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIF 444
             T  +++ + G      M   I   V  +G+ T+ + V+N+LIS +   + +++A ++F
Sbjct: 350 GNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVF 409

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           +NM  R+ I+WN++I     NG   + L HF  +  +  + D  T+S  L +C     L+
Sbjct: 410 NNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLK 469

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+ +HG + K+ L S + + N+++++YA+ G  + +  VF+ M  +D ISWN++++++ 
Sbjct: 470 WGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHV 529

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           + G+   A+     M    R   +  TFT  LSAC +     +  +I  + V  +     
Sbjct: 530 EDGKYSHAILLLVEMLKT-RKAMNYVTFTTALSACYNL----EKLKIVHAFVIHFAVHHN 584

Query: 625 EDHLSCMLDLLGRAGYLDEAERV 647
               + ++ + G+ G +DEA++V
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKV 607



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 246/554 (44%), Gaps = 63/554 (11%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           + +G ++++L  F  +  +H  K D  ++S  L AC + ++  +G  LH    ++GL++ 
Sbjct: 428 AHNGRFEESLGHFFWMRRTHP-KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESN 486

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N++LS+Y  A      + VF  +   D+ SW                         
Sbjct: 487 VCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISW------------------------- 521

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
                 N+M+    E+G     I L  EM K     +  +F + LS C    LE  + +H
Sbjct: 522 ------NSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN--LEKLKIVH 573

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDA---CKVFEEAKGYVCDHISYNVMMDGLAS 268
           + V        + + N L+TMY   G + +A   CK+  E      D +++N ++ G A 
Sbjct: 574 AFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPER-----DVVTWNALIGGHAD 628

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTS 324
                  +  F  M    L  + +T V+++  C+ P    + G  +HA  + +GFE  T 
Sbjct: 629 DKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTY 688

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V ++ ITMY+ CG ++ +  IF  L  K+  +WN + S  A    G  A+     M++ G
Sbjct: 689 VQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDG 748

Query: 385 IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +  D+F+F   LA+ G + ++   + +H+++   G   +  V NA +  Y K   I   +
Sbjct: 749 VDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVF 808

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           +I      R+  +WN LI+    +GF  Q  + F E+L   L+PD  T    LS+C+   
Sbjct: 809 RILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS--- 865

Query: 502 SLRHGKQI-HGYVLKNNLISKMSLGNA------MITLYAKCGDL-DCSLRVFNMMIEKDT 553
              HG  +  G V  +++ S+  +  A      +I L  + G L +    +  M +  + 
Sbjct: 866 ---HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNE 922

Query: 554 ISWNALISAYAQHG 567
             W +L++A   HG
Sbjct: 923 FVWRSLLAACKVHG 936



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 12  GNSNTSK---ELLLKLNISLAN--LSRSGHY---QDALHLFVQIHSSHKLKPDIYSLSTT 63
           G+ NTS    ++L   N S  N   S + HY   ++AL    ++ +   +  D +S S  
Sbjct: 701 GDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRND-GVDLDQFSFSVA 759

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           LA   NL     G QLH++ ++ G +   +V N  + +Y    ++  V R+    +    
Sbjct: 760 LATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSK 819

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFRE 179
            SW   +SA  + G    A E F +M D  L      + ++++ C+  G  D G+  F  
Sbjct: 820 RSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSS 879

Query: 180 M 180
           M
Sbjct: 880 M 880


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 321/616 (52%), Gaps = 24/616 (3%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           +++PD+  W   +S   + GH D A  VF+ MP R    YNAMI+G   N   ++   LF
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            +M + D+   N      +  C  G     R+L  L+ +      V   N+L++ Y   G
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGD---ARRLFDLMPEKD----VVSWNSLLSGYAQNG 156

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            V +A +VF+       + IS+N ++      GR+EEA + F       L    +++  +
Sbjct: 157 YVDEAREVFDNMPEK--NSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCL 210

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           M   +  R      A+ +        ++S N  I+ Y+  G + +A  +F     +D+ +
Sbjct: 211 MGGFV--RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT 268

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN 415
           W  M+S Y Q  +   A   + EM       +E ++ +++A  G+++  +M I   +F +
Sbjct: 269 WTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIA--GYVQTKKMDIARELFES 322

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
               NI   N +I+ Y +   I QA + F  M  R+ ++W  +I G+  +G   + L  F
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF 382

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            E+       +  T   ALS+CA I++L  GKQIHG  +K    +   +GNA++ +Y KC
Sbjct: 383 VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G +D +   F  + EKD +SWN +++ YA+HG G++A++ F++M+  G +KPD+ T   V
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGV 501

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSH GL+D GT  F SM  DYG IP   H +CM+DLLGRAG L+EA+ +I +   Q 
Sbjct: 502 LSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQP 561

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            + +W AL  A   HGN  LG   A ++ + E     +YVLLSN+YAA+G W +A  +R 
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRS 621

Query: 716 LLKRTGVIKQPGCSWI 731
            ++  GV K PG SW+
Sbjct: 622 KMRDIGVQKVPGYSWV 637



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 266/612 (43%), Gaps = 56/612 (9%)

Query: 4   RRITATIAGNSNTSKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           RR  +    N    K+  +LK N +++   R+GH   ALH+F  +       P   S+S 
Sbjct: 31  RRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTM-------PRRSSVSY 83

Query: 63  TLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
                  LRN+ F     L        L ++    N +L+ Y     L   +R+F  +  
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPERDLFSW----NVMLTGYVRNCRLGDARRLFDLMPE 139

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            DV SW + LS   + G+VD A EVFD MP+++   +N ++     NG  +    LF   
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESK 199

Query: 181 HKLDVRRDN---YSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
              D+   N     F     + DA  L        +  +   S      N +I+ Y   G
Sbjct: 200 SDWDLISWNCLMGGFVRKKKLGDARWL-----FDKMPVRDAISW-----NTMISGYAQGG 249

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A ++F+E+     D  ++  M+ G    G ++EA   F +M       +E+++ ++
Sbjct: 250 GLSQARRLFDESP--TRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAM 303

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVS-------NAAITMYSSCGKIDEACMIFARLQ 350
           ++       GY V  + M    E + S+        N  IT Y   G I +A   F  + 
Sbjct: 304 IA-------GY-VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--- 407
           ++D VSW  +I+ YAQ      A+  ++E++  G   +  TFG  L++   I  +E+   
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH      G  T   V NAL++ Y K   I +A   F  +  +++++WNT++ G+  +GF
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGN 526
             Q L  F  +  + ++PDE T+   LS+C+    L  G +    + K+  +I       
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYT 535

Query: 527 AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            MI L  + G L+ +  +  NM  +    SW AL+ A   HG  +      KA + V ++
Sbjct: 536 CMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE---KAAEMVFKM 592

Query: 586 KPDQATFTAVLS 597
           +P  +    +LS
Sbjct: 593 EPQNSGMYVLLS 604



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 47/298 (15%)

Query: 348 RLQEKDIVSWNTMISTYAQ-----------RNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           R+++ DI+ WN  IST+ +             + R + ++Y  M S  +R  +F     L
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN----L 98

Query: 397 ASSGFIEMVE--MIHAFVFINGIITNIQVS-----------------NALISAYAKNERI 437
           A + F +M E  +    V + G + N ++                  N+L+S YA+N  +
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++F NM  +N I+WN L+  ++ NG     ++    L  S+   D  + +  +   
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNG----RIEEACLLFESKSDWDLISWNCLMGGF 214

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R   L   + +   +   + IS     N MI+ YA+ G L  + R+F+    +D  +W 
Sbjct: 215 VRKKKLGDARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           A++S Y Q+G   EA + F  M +      ++ ++ A+++       +D    +F+SM
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPE-----KNEVSYNAMIAGYVQTKKMDIARELFESM 323


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  326 bits (835), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 208/664 (31%), Positives = 326/664 (49%), Gaps = 117/664 (17%)

Query: 183 LDVR-RDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           LDVR   N  FA +   C   L  +   R +H  V  SGF     +VN LI +Y+   + 
Sbjct: 5   LDVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDF 64

Query: 240 VDACKVFEE-----------------AKGYVC--------------DHISYNVMMDGLAS 268
           V A K+F+E                 A G +               D + YN M+ G + 
Sbjct: 65  VYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSH 124

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTS 324
           +     A+  FR M  A+ +P + TF SV+SA        R   Q+H   +K G E + +
Sbjct: 125 MNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPA 184

Query: 325 VSNAAITMYSSC----------------------------------------GKIDEACM 344
           V NA +++Y  C                                        G +  A  
Sbjct: 185 VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGARE 244

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           I   + E+  ++WN MIS Y    L   A+  + +M+ +G++ DE T+ S++   A  GF
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGF 304

Query: 402 IEMVEMIHAFVFINGIITN----IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             + + +HA++  N +  +    + V N LI+ Y K  ++  A +IF+ M  ++IITWNT
Sbjct: 305 FLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNT 364

Query: 458 LINGFL-------------------------------LNGFPVQGLQHFSELLMSELRPD 486
           L++G++                                NGF  Q L+ F+++ +    P+
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           +Y  + A+++C+ + +L +G+Q+H  ++     S +S+GNAMIT+YA+CG ++ +  +F 
Sbjct: 425 DYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFL 484

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M   D +SWN++I+A  QHG G +A+  ++ M   G I PD+ TF  VLSACSHAGLV+
Sbjct: 485 TMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEG-ILPDRRTFLTVLSACSHAGLVE 543

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G R F+SM+ +YG  P EDH + M+DL  RAG   +A+ VI+S   +AR+  W AL + 
Sbjct: 544 EGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAG 603

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN+ LG   A  L +        YVLLSN+YA+ G W + A  R+L++  GV K+P
Sbjct: 604 CRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEP 663

Query: 727 GCSW 730
            CSW
Sbjct: 664 ACSW 667



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 163/595 (27%), Positives = 271/595 (45%), Gaps = 85/595 (14%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           Y     L    NL + +    +H + + +G K   H+ N ++ +Y  + D V  +++F E
Sbjct: 14  YFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDE 73

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIG 175
           I  PDV + TT ++A + +G++  A E+F++ P   RD   YNAMITG +        I 
Sbjct: 74  IPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIE 133

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR--QLHSLVTKSGFSCLVSVVNALITMY 233
           LFR M   + + D+++FASVLS       +  +  Q+H  V K G     +V+NAL+++Y
Sbjct: 134 LFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVY 193

Query: 234 FNCG---------NVVDACKVFEEAK------------GYVCD----------------- 255
             C           +  A K+F+E              GYV +                 
Sbjct: 194 VKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQP 253

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHA 312
            I++N M+ G    G  E+AL  FR M +  ++  E T+ SV+SAC       +G QVHA
Sbjct: 254 GIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHA 313

Query: 313 QAMKSGF----EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY---- 364
             +K+      +   SV N  IT+Y   GK+D A  IF  +  KDI++WNT++S Y    
Sbjct: 314 YILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAG 373

Query: 365 ---------------------------AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLL 396
                                      AQ   G  A+  + +M+  G  P+++ F G++ 
Sbjct: 374 RMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAIT 433

Query: 397 ASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           A S  G +E    +HA +   G  + + V NA+I+ YA+   ++ A  +F  M   + ++
Sbjct: 434 ACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS 493

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WN++I     +G  V+ ++ + ++L   + PD  T    LS+C+    +  G +    +L
Sbjct: 494 WNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSML 553

Query: 515 KNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
           +N  I+      A MI L+ + G    +  V + M  E     W AL++    HG
Sbjct: 554 ENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHG 608



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 209/419 (49%), Gaps = 50/419 (11%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL-RNAAFGNQLHAYALRAGLKAYPH 93
           GH   A+ LF  +  ++  +PD ++ ++ L+A   +  +     Q+H   ++ G++ +P 
Sbjct: 128 GH--SAIELFRAMRWAN-FQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPA 184

Query: 94  VANTILSLY---------KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           V N +LS+Y          ++  + S +++F E+   + + WTT ++   + G +  A E
Sbjct: 185 VLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGARE 244

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           + D M ++    +NAMI+G   +G  +  + LFR+M  L V+ D  ++ SV+S C D G 
Sbjct: 245 ILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGF 304

Query: 204 LEFGRQLHSLVTKSGFSC----LVSVVNALITMYFNCGNVVDACKVF------------- 246
              G+Q+H+ + K+  +     L+SV N LIT+Y+  G V  A K+F             
Sbjct: 305 FLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNT 364

Query: 247 -----------EEAKGYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
                      EEAK +       + +++ VM+ GLA  G  E+AL  F  M +    P+
Sbjct: 365 LLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPN 424

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           +  F   ++AC        G Q+HAQ +  G ++  SV NA ITMY+ CG ++ A  +F 
Sbjct: 425 DYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFL 484

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            +   D VSWN+MI+   Q   G  AI  Y +M   GI PD  TF ++L++     +VE
Sbjct: 485 TMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVE 543


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 193/628 (30%), Positives = 342/628 (54%), Gaps = 21/628 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF-R 178
           +P ++   T L+A  ++G   +A  + D+MP  +   +N +I   +  G  +  +  F R
Sbjct: 46  SPSLFLRNTLLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFAR 103

Query: 179 EMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
                 VR D +++A+ L+ C  AG L  G+ +H+L    G +  V V N+L++MY  CG
Sbjct: 104 ARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCG 163

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A +VF+ A     D +S+N ++ G    G  ++ L  F  M  + +  +     SV
Sbjct: 164 DMGQARQVFDAADER--DDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSV 221

Query: 298 MSACLCPR-----VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           +  C         +   VH   +K+GF++   +++A + MY+  G + EA  +F  + + 
Sbjct: 222 IKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDP 281

Query: 353 DIVSWNTMISTYAQ------RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
           ++V +N MI+   +       ++ R A+  Y E+QS G+ P EFTF S++ +   +G IE
Sbjct: 282 NVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIE 341

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             + IH  V  +    +  + +ALI  Y  +  ++  ++ F ++  ++++TW  +I+G +
Sbjct: 342 FGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCV 401

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            N    + L  F ELL + L+PD +T+S  +++CA ++  R G+QI  +  K+      +
Sbjct: 402 QNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTA 461

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +GN+ I +YA+ GD+  ++R F  M   D +SW+A+IS++AQHG  ++A+  F  M D  
Sbjct: 462 MGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVD-A 520

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           ++ P++ TF  VL+ACSH GLVD+G + +++M  +Y   P   H +C++DLLGRAG L +
Sbjct: 521 KVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLAD 580

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           AE  I           W +L ++C  H ++  G+++A  ++E +    + YV L NIY  
Sbjct: 581 AEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLD 640

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AG    A+ IR+++K  GV K+PG SWI
Sbjct: 641 AGELSLASKIRDVMKERGVKKEPGLSWI 668



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/564 (23%), Positives = 258/564 (45%), Gaps = 54/564 (9%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N+ +   SR+G  + +L  F +   S  ++ D ++ +  LAAC+       G  +HA
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            ++  G+     V+N+++S+Y    D+   ++VF      D  SW               
Sbjct: 139 LSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW--------------- 183

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-- 199
                           NA+++G    G +D  + +F  M +  +  ++++  SV+  C  
Sbjct: 184 ----------------NALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAG 227

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-- 256
            D  +++    +H  V K+GF   V + +A++ MY   G + +A  +F+     V D   
Sbjct: 228 SDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKS----VLDPNV 283

Query: 257 ISYNVMMDGL----ASVGR--VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVG 307
           + +N M+ GL    A+VG   + EAL  + ++    + P+E TF SV+ AC        G
Sbjct: 284 VVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFG 343

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+H Q +K  F+    + +A I +Y + G +++    F  + ++D+V+W  MIS   Q 
Sbjct: 344 KQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQN 403

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVS 424
            L   A+  + E+   G++PD FT  S++   AS       E I  F   +G      + 
Sbjct: 404 ELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMG 463

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+ I  YA++  +  A + F  M   +I++W+ +I+    +G     L+ F+E++ +++ 
Sbjct: 464 NSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVV 523

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDL-DCSL 542
           P+E T    L++C+    +  G + +  + +   +S  +     ++ L  + G L D   
Sbjct: 524 PNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEA 583

Query: 543 RVFNMMIEKDTISWNALISAYAQH 566
            + + +   + + W +L+++   H
Sbjct: 584 FIRDSIFHDEPVIWRSLLASCRIH 607



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 9/174 (5%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L SC   S+ RH   +H ++++ +    + L N ++  Y + G    + R+ + M   + 
Sbjct: 24  LRSC---SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGGH--ARRLLDEMPRTNA 78

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +S+N LI AY++ G+ + ++  F   +    ++ D+ T+ A L+ACS AG + +G  +  
Sbjct: 79  VSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHA 138

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSA 666
             V + G        + ++ +  R G + +A +V ++     R D +W AL S 
Sbjct: 139 LSVLE-GIAGGVFVSNSLVSMYARCGDMGQARQVFDAA--DERDDVSWNALVSG 189


>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
 gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
          Length = 804

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 210/720 (29%), Positives = 363/720 (50%), Gaps = 47/720 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N ++ +  R+G+ ++ + L+ ++   +++  +  +++  + +C  L+N   G  +HA +L
Sbjct: 115 NSAMVDYFRAGYPEEVIILYKRL-KLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSL 173

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  L     V ++++ LY         + VF EI N D+ ++T+ ++             
Sbjct: 174 KLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITG------------ 221

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                       Y+  +     N +E     +  +M + ++  +  +  S+L +  + G 
Sbjct: 222 ------------YSETVDSIAWNAFE-----IATDMLQNNLEVNRVTLVSLLQIAGNLGA 264

Query: 204 LEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           L+ G+ LH    +        ++  +++  Y  CG    A  V + +KG V    S+N +
Sbjct: 265 LQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVLQNSKGTVA---SWNAL 321

Query: 263 MDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSAC--LCPR-VGYQVHAQAMKSG 318
           + GL   G+   A+     ML    + P  +TF +V+SAC  LC       +HA  ++  
Sbjct: 322 LSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASIHAYFIRRF 381

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 ++ A I +Y+ C ++  +  +F +L  KD+VS+N MI  Y Q ++   A     
Sbjct: 382 IPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLN 441

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAK 433
            M + G+ PD  T  SLLA+  F +  ++     IH F   +G  +++ V N ++  Y+ 
Sbjct: 442 YMMAEGVAPDFATVLSLLAA--FADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSA 499

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             +I  A  IF ++  +N+++W  ++ G L NG   + +Q F  +     +PD  +L  A
Sbjct: 500 CGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTA 559

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           + + + +  L   KQIH +V ++ L       N++I+ YAKCG LD S  +F  +  ++ 
Sbjct: 560 VQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNL 619

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
            +WNA+ISAYA HG     +  FK M++   I+PD+ TF+ VL+ACSHAGLV DG RIF+
Sbjct: 620 DTWNAMISAYAMHGFHINVLEMFKQMEE-ENIQPDELTFSTVLTACSHAGLVKDGWRIFN 678

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           SM + Y  +P E+H  CM+DLLGRAG+L++  + I    ++ +S  + AL SAC  HGN 
Sbjct: 679 SMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACRTHGNT 738

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
           RL   I+  LLE     P +Y L+S +YA  G W E AN +     +G+ K PG S I S
Sbjct: 739 RLAHAISKELLEHGPQNPGIYALISEVYAQEGQWNEVANTKARADLSGLKKHPGSSLIES 798



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 134/590 (22%), Positives = 267/590 (45%), Gaps = 29/590 (4%)

Query: 101 LYKNARDLVSVKR----VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           L++   D+  +K+    VF+     DV   +  LS    +G +  +  VF K+ + D+ +
Sbjct: 54  LFQGCADVRFLKKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISL 113

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           +N+ +      GY +  I L++ +    +  +  +   V+  C +   L  G+ +H+   
Sbjct: 114 WNSAMVDYFRAGYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSL 173

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA-SVGRVE- 273
           K   S    V ++LI +Y       D+  VFEE      D ++Y  M+ G + +V  +  
Sbjct: 174 KLALSGNKFVGSSLIGLYSKFSKTNDSRGVFEEIINK--DIVAYTSMITGYSETVDSIAW 231

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            A     DML  +L  + +T VS++         + G  +H  +++        +   +I
Sbjct: 232 NAFEIATDMLQNNLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSI 291

Query: 331 T-MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVGIRP 387
              Y+ CG    A  +     +  + SWN ++S   +     +AI  YL   +    + P
Sbjct: 292 VNFYTRCGAYQSAATVLQN-SKGTVASWNALLSGLNRAGQSFNAI-QYLPVMLHEHKVTP 349

Query: 388 DEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  TF ++L++     +      IHA+     I  ++ ++ ALI  Y K  R+ ++  +F
Sbjct: 350 DSVTFANVLSACAELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLF 409

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  ++++++N +I G+L N    +     + ++   + PD  T+   L++ A    L 
Sbjct: 410 DQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLV 469

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+ IHG+ +++   S + + N ++ +Y+ CG +  +  +F+ + +K+ +SW A++    
Sbjct: 470 RGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCL 529

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            +G   E V  F+ MQ  G  KPD  +    + A S  G + +G +     V  Y  +  
Sbjct: 530 SNGHADEVVQLFQVMQKYGE-KPDSVSLVTAVQAVSDLGHL-NGLKQIHCFV--YRSLLE 585

Query: 625 EDHLSC--MLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
           +D ++   ++    + G LD +  +  S  ++ R+ D W A+ SA A HG
Sbjct: 586 KDKITANSLISAYAKCGKLDLSAGLFFS--LKYRNLDTWNAMISAYAMHG 633



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 183/410 (44%), Gaps = 54/410 (13%)

Query: 8   ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAAC 67
           AT+  NS   K  +   N  L+ L+R+G   +A+     +   HK+ PD  + +  L+AC
Sbjct: 305 ATVLQNS---KGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSAC 361

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT 127
           A L    F   +HAY +R  +     +   ++ +Y                         
Sbjct: 362 AELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVY------------------------- 396

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
              + CT++    Y   +FD++  +D+  YNAMI G  +N   +    L   M    V  
Sbjct: 397 ---TKCTRVMRSKY---LFDQLIIKDVVSYNAMIYGYLQNDMANEATSLLNYMMAEGVAP 450

Query: 188 DNYSFASVLSV----CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           D   FA+VLS+     D   L  GR +H    + GF   V V N ++ MY  CG +  A 
Sbjct: 451 D---FATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQILYMYSACGKIAAAR 507

Query: 244 KVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            +F+  E K  V    S+  MM G  S G  +E +  F+ M     +P  ++ V+ + A 
Sbjct: 508 AIFDSLEKKNLV----SWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDSVSLVTAVQA- 562

Query: 302 LCPRVGY-----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
               +G+     Q+H    +S  E     +N+ I+ Y+ CGK+D +  +F  L+ +++ +
Sbjct: 563 -VSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFSLKYRNLDT 621

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           WN MIS YA      + +  + +M+   I+PDE TF ++L +     +V+
Sbjct: 622 WNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVK 671


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 214/695 (30%), Positives = 347/695 (49%), Gaps = 50/695 (7%)

Query: 75  FGNQLHAYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA- 132
            G  L A  +  G+     VA N ++S Y    D+   +R+F  + + DV SW + L+  
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           C  +  VD A  +F+KMP+R+L  +  MI+G            +F +MH+  +  D  +F
Sbjct: 169 CHSLQMVD-ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAK 250
           AS LS     G L+    L  L  K+GF   V +  A++ +Y    +V+D A K FE   
Sbjct: 228 ASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI 287

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
               +  +++ M+  L+  GR++ A+  +    V S+       ++ ++ C     G   
Sbjct: 288 ER--NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQC-----GRID 339

Query: 311 HAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
            A+ +         VS NA IT Y   G ++EA  +F ++  ++ +SW  MI+ YAQ   
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNA 426
              A+    E+   G+ P   +  S+  +   I  +E    +H+     G   N    NA
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL------- 479
           LI+ Y K   ++ A Q+F  M  ++I++WN+ +   + N    +    F  +L       
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSW 519

Query: 480 ----------------MSELR--------PDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
                           M   +        P+   L++ L  C  + + + G+QIH   +K
Sbjct: 520 TTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIK 579

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             + S++ + NA+I++Y KCG  D S R+F++M E+D  +WN +I+ YAQHG G+EA+  
Sbjct: 580 LGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKM 638

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           ++ M+  G + P++ TF  +L+ACSHAGLVD+G + F SM  DYG  P  +H +CM+DLL
Sbjct: 639 YQHMESAG-VLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GR G +  AE+ I    I+  +  W AL  AC  H N  +G+  A  L   E      YV
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYV 757

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           +LSNIY++ G+W E A +R+++K+ GVIK+PGCSW
Sbjct: 758 MLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSW 792



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 245/551 (44%), Gaps = 61/551 (11%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N+++S Y +     + + ++  I   ++ +    LS   ++G V  A  VFD M +R+  
Sbjct: 69  NSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTV 128

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +NAMI+   +NG   +   LF  M   D                               
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSRD------------------------------- 157

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
                  VS  N+++T Y +   +VDA  +FE+      + +S+ VM+ G   +    +A
Sbjct: 158 -------VSSWNSMLTGYCHSLQMVDARNLFEKMPER--NLVSWTVMISGYGRIENHGKA 208

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
              F  M    L P +  F S +SA        V   +   A+K+GFE    +  A + +
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNV 268

Query: 333 YS-SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVGIRPDE 389
           YS     +D A   F  + E++  +W+TMI+  +      +AI  Y    ++S+  R   
Sbjct: 269 YSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTAL 328

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMS 448
            T    LA  G I+      A +    I   I VS NALI+ Y +N  + +A ++F  M 
Sbjct: 329 ITG---LAQCGRID-----DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            RN I+W  +I G+  NG   + L    EL  S + P   +L+    +C+ I +L  G Q
Sbjct: 381 FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQ 440

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H   +K          NA+IT+Y KC +++ + +VF+ M+ KD +SWN+ ++A  Q+  
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDL 500

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
             EA + F  M     +  D  ++T ++SA +HA   ++    F +M  ++  +P    L
Sbjct: 501 LDEARNTFDNM-----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPIL 554

Query: 629 SCMLDLLGRAG 639
           + +L + G  G
Sbjct: 555 TILLGVCGSLG 565



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 164/325 (50%), Gaps = 21/325 (6%)

Query: 12  GNSNTSKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G  N +KEL  K+           +A  +++G  ++AL L  ++H S  L P + SL++ 
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML-PSLSSLTSI 425

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
             AC+N+     G Q+H+ A++ G +      N ++++Y   R++   ++VFS +   D+
Sbjct: 426 FFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDI 485

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW +FL+A  +   +D A   FD M  RD   +  +I+        +  +G F+ M   
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE 545

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               ++     +L VC + G  + G+Q+H++  K G    + V NALI+MYF CG   D+
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADS 604

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            ++F+  +    D  ++N ++ G A  G   EA+  ++ M  A + P+E+TFV +++AC 
Sbjct: 605 RRIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC- 661

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSN 327
                   HA  +  G++ + S+S 
Sbjct: 662 -------SHAGLVDEGWKFFKSMSQ 679



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 150/329 (45%), Gaps = 44/329 (13%)

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E   S  +A I      G++ EA  +F  +  +DI++WN+MIS Y    +  +A   Y  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIK 438
           +    +R      G++L  SG+  +  ++ A    +G++    V+ NA+IS Y +N  I 
Sbjct: 91  ISGGNMRT-----GAILL-SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDIT 144

Query: 439 QAYQIFHNMSPRNIITWNTLINGF-----------LLNGFPVQGL--------------Q 473
            A ++F  M  R++ +WN+++ G+           L    P + L               
Sbjct: 145 MARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN 204

Query: 474 H------FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           H      F ++    L PD+   + ALS+   + +L   + +    LK      + +G A
Sbjct: 205 HGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTA 264

Query: 528 MITLYAK-CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +Y++    LD +++ F  MIE++  +W+ +I+A +  G    A++ ++    V  I 
Sbjct: 265 ILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-DPVKSI- 322

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSM 615
              A  TA+++  +  G +DD   +F+ +
Sbjct: 323 ---ACRTALITGLAQCGRIDDARILFEQI 348


>gi|242066458|ref|XP_002454518.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
 gi|241934349|gb|EES07494.1| hypothetical protein SORBIDRAFT_04g032600 [Sorghum bicolor]
          Length = 834

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 208/711 (29%), Positives = 347/711 (48%), Gaps = 78/711 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+   + G ++D + L +++ +   + PD  +L+  L AC  L + A G Q+HA A+
Sbjct: 132 NALLSGYCQRGMFRDLVGLSIEM-ARCGVAPDRTTLAVLLKACGGLDDLALGVQIHALAV 190

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+      + ++ +Y   R L                               + A  
Sbjct: 191 KTGLEMDVRAGSALVDMYGKCRSL-------------------------------EDALH 219

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F  M +R+   + A+I GC +N  E    GL                  +L  C A   
Sbjct: 220 FFHGMGERNSVSWGAVIAGCVQN--EQYMRGL-----------------ELLCRCKAITC 260

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   RQLH+   K+ FS    V  A++ +Y    ++VDA + F     +  +  + N MM
Sbjct: 261 LSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVE--TCNAMM 318

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            GL   G   EA+  F+ M  + +    ++   V SAC            A   GF+   
Sbjct: 319 VGLVRTGLGAEAMQLFQFMTRSGIGFGVVSLSGVFSAC------------AEVKGFDVDV 366

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V NA + +Y  C  + EA ++F  ++++D VSWNT+I+   Q       I+   EM   
Sbjct: 367 CVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLRS 426

Query: 384 GIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+  D+FT+GS+L +   ++ +E   ++H     +G+  +  VS+ ++  Y K   I +A
Sbjct: 427 GMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEA 486

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            ++   +  + +++WN++I GF LN    +  + FSE+L   ++PD +T +  L SCA +
Sbjct: 487 LKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMGVKPDHFTYATVLDSCANL 546

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +++  GKQIHG ++K  ++    + + ++ +YAKCG++  S  +F  + + D +SWNA+I
Sbjct: 547 ATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVSWNAMI 606

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
             YA HG+G EA+  F+  Q    + P+ ATF AVL ACSH GL+DDG R F  M + Y 
Sbjct: 607 CGYALHGQGFEALEMFERTQK-ANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMTSRYK 665

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H +CM           EA + I S  ++A +  W  L S C    ++ +    A
Sbjct: 666 LEPQLEHFACMGP--------QEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAA 717

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +L  + D  SVY+LLSN+YA +G W + +  R L+++  + K+PGCSWI
Sbjct: 718 SNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWI 768



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 159/613 (25%), Positives = 279/613 (45%), Gaps = 40/613 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L A A     A G   HA  L +G      V+N +L +Y           VF  + + D 
Sbjct: 38  LCASAGHSALATGQAAHARMLVSGFVPTMFVSNCLLQMYARCGGAAHAHGVFDTMPHRDT 97

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYEDIGIGLFREMHK 182
            SW T L+A   MG    A  +   MPD D+  +NA+++G C    + D+ +GL  EM +
Sbjct: 98  VSWNTMLTAYAHMGDTGMATSLLCVMPDPDVVSWNALLSGYCQRGMFRDL-VGLSIEMAR 156

Query: 183 LDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
             V  D  + A +L  C  GL  L  G Q+H+L  K+G    V   +AL+ MY  C ++ 
Sbjct: 157 CGVAPDRTTLAVLLKAC-GGLDDLALGVQIHALAVKTGLEMDVRAGSALVDMYGKCRSLE 215

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA   F        + +S+  ++ G        E  +R  ++L                A
Sbjct: 216 DALHFFHGMGER--NSVSWGAVIAGCVQ----NEQYMRGLELLCRC------------KA 257

Query: 301 CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
             C     Q+HA A+K+ F +   V  A + +Y+    + +A   F  L    + + N M
Sbjct: 258 ITCLSTARQLHAHAIKNKFSSDRVVGTAIVDVYAKADSLVDARRAFFGLPNHTVETCNAM 317

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN 420
           +    +  LG  A+  +  M   GI      FG +  S  F    E       + G   +
Sbjct: 318 MVGLVRTGLGAEAMQLFQFMTRSGI-----GFGVVSLSGVFSACAE-------VKGFDVD 365

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V NA++  Y K + + +AY +F  M  R+ ++WNT+I     N      + H +E+L 
Sbjct: 366 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNTIIAALEQNECYEDTIVHLNEMLR 425

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S +  D++T    L +CA + SL +G  +HG  +K+ L     + + ++ +Y KCG +  
Sbjct: 426 SGMEADDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITE 485

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +L++ + +  ++ +SWN++I+ ++ + + +EA   F  M D+G +KPD  T+  VL +C+
Sbjct: 486 ALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEMLDMG-VKPDHFTYATVLDSCA 544

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS-QHIQARSDN 659
           +   ++ G +I   ++     +  E   S ++D+  + G + +++ +    Q +   S  
Sbjct: 545 NLATIELGKQIHGQIIKQE-MLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVS-- 601

Query: 660 WWALFSACAAHGN 672
           W A+    A HG 
Sbjct: 602 WNAMICGYALHGQ 614



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/193 (20%), Positives = 88/193 (45%), Gaps = 8/193 (4%)

Query: 6   ITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLA 65
           IT  +  +     + L+  N  +A  S +   ++A   F ++     +KPD ++ +T L 
Sbjct: 483 ITEALKLHDRIGGQELVSWNSIIAGFSLNKQSEEAQKFFSEM-LDMGVKPDHFTYATVLD 541

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           +CANL     G Q+H   ++  +     +++T++ +Y    ++   + +F ++Q  D  S
Sbjct: 542 SCANLATIELGKQIHGQIIKQEMLGDEFISSTLVDMYAKCGNMPDSQLMFEKVQKLDFVS 601

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDL----PVYNAMITGCTENGYEDIGIGLFREM- 180
           W   +      G    A E+F++    ++      + A++  C+  G  D G   F  M 
Sbjct: 602 WNAMICGYALHGQGFEALEMFERTQKANVAPNHATFVAVLRACSHVGLLDDGCRYFHLMT 661

Query: 181 --HKLDVRRDNYS 191
             +KL+ + ++++
Sbjct: 662 SRYKLEPQLEHFA 674


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 212/714 (29%), Positives = 364/714 (50%), Gaps = 46/714 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + + S SG++Q+AL L+ +I  S     D + L + L AC+N  +   G  +H   ++ G
Sbjct: 19  IKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQG 77

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   +AN+ +  Y                                K G +D A   FD
Sbjct: 78  CQSSTSIANSTIDFY-------------------------------MKYGDLDSAQRAFD 106

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
              ++D   +N M+ G   NG    G+  F +      + +  S   V+    +  +   
Sbjct: 107 STKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQ 166

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G   H  + +SGFS ++SV N+L+++Y    ++  A K+F E      D +S++VM+ G 
Sbjct: 167 GFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEMS-VRNDVVSWSVMIGGF 224

Query: 267 ASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY 322
             +G  E+  + FR+M+  A + P  +T VSV+ AC   +   +G  VH   +  G E  
Sbjct: 225 VQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDD 284

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V N+ I MYS C  +  A   F  + EK+I+SWN M+S Y        A+     M  
Sbjct: 285 LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVR 344

Query: 383 VGIRPDEFTFGSLLA-SSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G   DE T  ++L  +  F++ ++   +H  +   G  +N  + N++I AYAK   ++ 
Sbjct: 345 EGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVEL 404

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F  M+ ++++ W+T+I GF  NG P + +  F ++   E+ P+  ++   + +CA 
Sbjct: 405 ARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM-NEEVIPNNVSIMNLMEACAV 463

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            + LR  K  HG  ++  L S++ +G ++I +Y+KCGD++ S+R FN + +K+ + W+A+
Sbjct: 464 SAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAM 523

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ISA+  +G   EA+  F+ ++  G  KP+  T  ++LSACSH GL+++G   F SMV  +
Sbjct: 524 ISAFRINGLAHEALMLFEKIKQNG-TKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKH 582

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQARSDNWWALFSACAAHGNLRLGR 677
           G  P  +H SC++D+L RAG  +EA  +I    + ++A +  W  L S+C ++GN+ LG 
Sbjct: 583 GIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGTLLSSCRSYGNISLGS 642

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  +L+ E    + Y+L SN+YA  GL  ++A +R L K  GV    G S +
Sbjct: 643 GAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGVKVVAGYSLV 696


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 201/616 (32%), Positives = 321/616 (52%), Gaps = 24/616 (3%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           +++PD+  W   +S   + GH D A  VF+ MP R    YNAMI+G   N   ++   LF
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            +M + D+   N      +  C  G     R+L  L+ +      V   N+L++ Y   G
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNCRLGD---ARRLFDLMPEKD----VVSWNSLLSGYAQNG 156

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            V +A +VF+       + IS+N ++      GR+EEA + F       L    +++  +
Sbjct: 157 YVDEAREVFDNMPEK--NSISWNGLLAAYVHNGRIEEACLLFESKSDWDL----ISWNCL 210

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           M   +  R      A+ +        ++S N  I+ Y+  G + +A  +F     +D+ +
Sbjct: 211 MGGFV--RKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFT 268

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN 415
           W  M+S Y Q  +   A   + EM       +E ++ +++A  G+++  +M I   +F +
Sbjct: 269 WTAMVSGYVQNGMLDEAKTFFDEMPE----KNEVSYNAMIA--GYVQTKKMDIARELFES 322

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
               NI   N +I+ Y +   I QA + F  M  R+ ++W  +I G+  +G   + L  F
Sbjct: 323 MPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMF 382

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            E+       +  T   ALS+CA I++L  GKQIHG  +K    +   +GNA++ +Y KC
Sbjct: 383 VEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKC 442

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G +D +   F  + EKD +SWN +++ YA+HG G++A++ F++M+  G +KPD+ T   V
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAG-VKPDEITMVGV 501

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LSACSH GL+D GT  F SM  DYG IP   H +CM+DLLGRAG L+EA+ +I +   Q 
Sbjct: 502 LSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQP 561

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            + +W AL  A   HGN  LG   A ++ + E     +YVLLSN+YAA+G W +A  +R 
Sbjct: 562 GAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRS 621

Query: 716 LLKRTGVIKQPGCSWI 731
            ++  GV K PG SW+
Sbjct: 622 KMRDIGVQKVPGYSWV 637



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 266/612 (43%), Gaps = 56/612 (9%)

Query: 4   RRITATIAGNSNTSKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           RR  +    N    K+  +LK N +++   R+GH   ALH+F  +       P   S+S 
Sbjct: 31  RRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTM-------PRRSSVSY 83

Query: 63  TLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
                  LRN+ F     L        L ++    N +L+ Y     L   +R+F  +  
Sbjct: 84  NAMISGYLRNSKFNLARNLFDQMPERDLFSW----NVMLTGYVRNCRLGDARRLFDLMPE 139

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            DV SW + LS   + G+VD A EVFD MP+++   +N ++     NG  +    LF   
Sbjct: 140 KDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESK 199

Query: 181 HKLDVRRDN---YSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
              D+   N     F     + DA  L        +  +   S      N +I+ Y   G
Sbjct: 200 SDWDLISWNCLMGGFVRKKKLGDARWL-----FDKMPVRDAISW-----NTMISGYAQGG 249

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A ++F+E+     D  ++  M+ G    G ++EA   F +M       +E+++ ++
Sbjct: 250 GLSQARRLFDESP--TRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAM 303

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVS-------NAAITMYSSCGKIDEACMIFARLQ 350
           ++       GY V  + M    E + S+        N  IT Y   G I +A   F  + 
Sbjct: 304 IA-------GY-VQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMP 355

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--- 407
           ++D VSW  +I+ YAQ      A+  ++E++  G   +  TFG  L++   I  +E+   
Sbjct: 356 QRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH      G  T   V NAL++ Y K   I +A   F  +  +++++WNT++ G+  +GF
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGF 475

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGN 526
             Q L  F  +  + ++PDE T+   LS+C+    L  G +    + K+  +I       
Sbjct: 476 GRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYT 535

Query: 527 AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            MI L  + G L+ +  +  NM  +    SW AL+ A   HG  +      KA + V ++
Sbjct: 536 CMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE---KAAEMVFKM 592

Query: 586 KPDQATFTAVLS 597
           +P  +    +LS
Sbjct: 593 EPQNSGMYVLLS 604



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 134/298 (44%), Gaps = 47/298 (15%)

Query: 348 RLQEKDIVSWNTMISTYAQ-----------RNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           R+++ DI+ WN  IST+ +             + R + ++Y  M S  +R  +F     L
Sbjct: 43  RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN----L 98

Query: 397 ASSGFIEMVE--MIHAFVFINGIITNIQVS-----------------NALISAYAKNERI 437
           A + F +M E  +    V + G + N ++                  N+L+S YA+N  +
Sbjct: 99  ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A ++F NM  +N I+WN L+  ++ NG     ++    L  S+   D  + +  +   
Sbjct: 159 DEAREVFDNMPEKNSISWNGLLAAYVHNG----RIEEACLLFESKSDWDLISWNCLMGGF 214

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R   L   + +   +   + IS     N MI+ YA+ G L  + R+F+    +D  +W 
Sbjct: 215 VRKKKLGDARWLFDKMPVRDAIS----WNTMISGYAQGGGLSQARRLFDESPTRDVFTWT 270

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           A++S Y Q+G   EA + F  M +      ++ ++ A+++       +D    +F+SM
Sbjct: 271 AMVSGYVQNGMLDEAKTFFDEMPE-----KNEVSYNAMIAGYVQTKKMDIARELFESM 323



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 45/131 (34%), Gaps = 38/131 (29%)

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           + GL+D G   F  M  +Y   P   H +CM+DLLGR   L+E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            AL  A   HGN  LG   A +  +       +                       ++  
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857

Query: 721 GVIKQPGCSWI 731
           GV K PG SW 
Sbjct: 858 GVQKVPGYSWF 868


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 177/482 (36%), Positives = 275/482 (57%), Gaps = 8/482 (1%)

Query: 258 SYNVMMDGLASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           S+NVM+ GL++   +   AL  +  M    L+P+ LT+  +  AC   L    G   H  
Sbjct: 93  SFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCS 152

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ G +    VS++ ITMY+ CGK+ +A  +F  + +KD+VSWN+MIS Y++      A
Sbjct: 153 VIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEA 212

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           +  + EM   G +P+E +  S+L + G +  +++   +  FV  N +  N  + +ALI  
Sbjct: 213 VGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHM 272

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A +IF +M  ++ +TWN +I G+  NG   + ++ F ++ MS   PD+ TL
Sbjct: 273 YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITL 332

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              LS+CA I +L  GKQ+  Y  +      + +G A++ +YAKCG LD + RVF  M  
Sbjct: 333 IGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPN 392

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKA-MQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           K+ +SWNA+ISA A HG+ +EA++ FK+ M + G + P+  TF  VLSAC HAGLVD+G 
Sbjct: 393 KNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGR 452

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R+F  M + +G +P  +H SCM+DL  RAG+L+EA   + +   +       AL  AC  
Sbjct: 453 RLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQK 512

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
             N+ +   +  LLLE E      YV+ S +YA    W+++A +R L+K+ GV K PGCS
Sbjct: 513 RKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCS 572

Query: 730 WI 731
           WI
Sbjct: 573 WI 574



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 228/475 (48%), Gaps = 14/475 (2%)

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           SL +    +  +K++ +++    ++   +FL     +    YA   F  + D     +N 
Sbjct: 37  SLLQQCLSIKQLKQIHAQLLTNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNV 96

Query: 160 MITG-CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKS 217
           MI G  T      + +  +  M  L ++ +N ++  +   C   L +E GR  H  V + 
Sbjct: 97  MIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRR 156

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G      V ++LITMY  CG + DA KVF+E      D +S+N M+ G + +    EA+ 
Sbjct: 157 GLDEDGHVSHSLITMYARCGKMGDARKVFDEISQK--DLVSWNSMISGYSKMRHAGEAVG 214

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            FR+M+ A  +P+E++ VSV+ AC      ++G  V    +++       + +A I MY 
Sbjct: 215 LFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYG 274

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG +  A  IF  +++KD V+WN MI+ YAQ  +   AI  + +M+     PD+ T   
Sbjct: 275 KCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIG 334

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   AS G +++ + +  +    G   ++ V  AL+  YAK   +  A+++F+ M  +N
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKN 394

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMS--ELRPDEYTLSVALSSCARISSLRHGKQI 509
            ++WN +I+    +G   + L  F  ++     + P++ T    LS+C     +  G+++
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRL 454

Query: 510 -HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISA 562
            H       L+ K+   + M+ L+++ G L+ +      M EK D +   AL+ A
Sbjct: 455 FHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 233/511 (45%), Gaps = 82/511 (16%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           LKP+  +      AC+NL     G   H   +R GL    HV+++++++Y          
Sbjct: 123 LKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMY---------- 172

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                             + C KMG    A +VFD++  +DL  +N+MI+G ++  +   
Sbjct: 173 ------------------ARCGKMGD---ARKVFDEISQKDLVSWNSMISGYSKMRHAGE 211

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +GLFREM +   + +  S  SVL  C + G L+ G  +   V ++  +    + +ALI 
Sbjct: 212 AVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIH 271

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG++V A ++F+  K    D +++N M+ G A  G  EEA+  F+DM ++S  P +
Sbjct: 272 MYGKCGDLVSARRIFDSMKKK--DKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQ 329

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T + ++SAC       +G QV   A + GF+    V  A + MY+ CG +D A  +F  
Sbjct: 330 ITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYG 389

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLAS---SGFI- 402
           +  K+ VSWN MIS  A     + A+  +  M + G  + P++ TF  +L++   +G + 
Sbjct: 390 MPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVD 449

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E   + H      G++  I+  + ++  +++   +++A+     M               
Sbjct: 450 EGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPE------------- 496

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
                                +PDE  L   L +C +  ++   +++   +L+   +   
Sbjct: 497 ---------------------KPDEVILGALLGACQKRKNIDISERVMKLLLE---LEPS 532

Query: 523 SLGNAMIT--LYAKCGDLDCSLRVFNMMIEK 551
           + GN +I+  LYA     D S R+  +M +K
Sbjct: 533 NSGNYVISSKLYANLRRWDDSARMRMLMKQK 563



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/334 (21%), Positives = 129/334 (38%), Gaps = 70/334 (20%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +++G  ++A+ LF  +  S    PD  +L   L+ACA++     G Q+  YA 
Sbjct: 298 NAMITGYAQNGMSEEAIKLFQDMRMS-STAPDQITLIGILSACASIGALDLGKQVEIYAS 356

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +   +V   ++ +Y     L +  RVF  + N +  SW   +SA    G    A  
Sbjct: 357 ERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALA 416

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F  M          M  G T                   V  ++ +F  VLS C  AGL
Sbjct: 417 LFKSM----------MNEGGT-------------------VSPNDITFVGVLSACVHAGL 447

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           ++ GR+L  +++ S                                 G V     Y+ M+
Sbjct: 448 VDEGRRLFHMMSSSF--------------------------------GLVPKIEHYSCMV 475

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
           D  +  G +EEA   +  ++    +P E+   +++ AC   R    +  + MK   E   
Sbjct: 476 DLFSRAGHLEEA---WDFVMTMPEKPDEVILGALLGACQ-KRKNIDISERVMKLLLELEP 531

Query: 324 SVSNAAI---TMYSSCGKIDEACMIFARLQEKDI 354
           S S   +    +Y++  + D++  +   +++K +
Sbjct: 532 SNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 214/695 (30%), Positives = 347/695 (49%), Gaps = 50/695 (7%)

Query: 75  FGNQLHAYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA- 132
            G  L A  +  G+     VA N ++S Y    D+   +R+F  + + DV SW + L+  
Sbjct: 109 LGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGY 168

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
           C  +  VD A  +F+KMP+R+L  +  MI+G            +F +MH+  +  D  +F
Sbjct: 169 CHSLQMVD-ARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNF 227

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAK 250
           AS LS     G L+    L  L  K+GF   V +  A++ +Y    +V+D A K FE   
Sbjct: 228 ASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMI 287

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
               +  +++ M+  L+  GR++ A+  +    V S+       ++ ++ C     G   
Sbjct: 288 ER--NEYTWSTMIAALSHGGRIDAAIAVYERDPVKSI-ACRTALITGLAQC-----GRID 339

Query: 311 HAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
            A+ +         VS NA IT Y   G ++EA  +F ++  ++ +SW  MI+ YAQ   
Sbjct: 340 DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGR 399

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNA 426
              A+    E+   G+ P   +  S+  +   I  +E    +H+     G   N    NA
Sbjct: 400 SEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNA 459

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL------- 479
           LI+ Y K   ++ A Q+F  M  ++I++WN+ +   + N    +    F  +L       
Sbjct: 460 LITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSW 519

Query: 480 ----------------MSELR--------PDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
                           M   +        P+   L++ L  C  + + + G+QIH   +K
Sbjct: 520 TTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIK 579

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             + S++ + NA+I++Y KCG  D S R+F++M E+D  +WN +I+ YAQHG G+EA+  
Sbjct: 580 LGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKM 638

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           ++ M+  G + P++ TF  +L+ACSHAGLVD+G + F SM  DYG  P  +H +CM+DLL
Sbjct: 639 YQHMESAG-VLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLL 697

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GR G +  AE+ I    I+  +  W AL  AC  H N  +G+  A  L   E      YV
Sbjct: 698 GRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYV 757

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           +LSNIY++ G+W E A +R+++K+ GVIK+PGCSW
Sbjct: 758 MLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSW 792



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 245/551 (44%), Gaps = 61/551 (11%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N+++S Y +     + + ++  I   ++ +    LS   ++G V  A  VFD M +R+  
Sbjct: 69  NSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTV 128

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +NAMI+   +NG   +   LF  M   D                               
Sbjct: 129 AWNAMISCYVQNGDITMARRLFDAMPSRD------------------------------- 157

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
                  VS  N+++T Y +   +VDA  +FE+      + +S+ VM+ G   +    +A
Sbjct: 158 -------VSSWNSMLTGYCHSLQMVDARNLFEKMPER--NLVSWTVMISGYGRIENHGKA 208

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
              F  M    L P +  F S +SA        V   +   A+K+GFE    +  A + +
Sbjct: 209 WDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNV 268

Query: 333 YS-SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVGIRPDE 389
           YS     +D A   F  + E++  +W+TMI+  +      +AI  Y    ++S+  R   
Sbjct: 269 YSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTAL 328

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMS 448
            T    LA  G I+      A +    I   I VS NALI+ Y +N  + +A ++F  M 
Sbjct: 329 ITG---LAQCGRID-----DARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP 380

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            RN I+W  +I G+  NG   + L    EL  S + P   +L+    +C+ I +L  G Q
Sbjct: 381 FRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQ 440

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H   +K          NA+IT+Y KC +++ + +VF+ M+ KD +SWN+ ++A  Q+  
Sbjct: 441 VHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDL 500

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
             EA + F  M     +  D  ++T ++SA +HA   ++    F +M  ++  +P    L
Sbjct: 501 LDEARNTFDNM-----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHE-LPNSPIL 554

Query: 629 SCMLDLLGRAG 639
           + +L + G  G
Sbjct: 555 TILLGVCGSLG 565



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 164/325 (50%), Gaps = 21/325 (6%)

Query: 12  GNSNTSKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G  N +KEL  K+           +A  +++G  ++AL L  ++H S  L P + SL++ 
Sbjct: 367 GMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML-PSLSSLTSI 425

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
             AC+N+     G Q+H+ A++ G +      N ++++Y   R++   ++VFS +   D+
Sbjct: 426 FFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDI 485

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW +FL+A  +   +D A   FD M  RD   +  +I+        +  +G F+ M   
Sbjct: 486 VSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCE 545

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               ++     +L VC + G  + G+Q+H++  K G    + V NALI+MYF CG   D+
Sbjct: 546 HELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG-CADS 604

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            ++F+  +    D  ++N ++ G A  G   EA+  ++ M  A + P+E+TFV +++AC 
Sbjct: 605 RRIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC- 661

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSN 327
                   HA  +  G++ + S+S 
Sbjct: 662 -------SHAGLVDEGWKFFKSMSQ 679



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 150/329 (45%), Gaps = 44/329 (13%)

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E   S  +A I      G++ EA  +F  +  +DI++WN+MIS Y    +  +A   Y  
Sbjct: 31  ELEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDA 90

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIK 438
           +    +R      G++L  SG+  +  ++ A    +G++    V+ NA+IS Y +N  I 
Sbjct: 91  ISGGNMRT-----GAILL-SGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDIT 144

Query: 439 QAYQIFHNMSPRNIITWNTLINGF-----------LLNGFPVQGL--------------Q 473
            A ++F  M  R++ +WN+++ G+           L    P + L               
Sbjct: 145 MARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIEN 204

Query: 474 H------FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           H      F ++    L PD+   + ALS+   + +L   + +    LK      + +G A
Sbjct: 205 HGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTA 264

Query: 528 MITLYAK-CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ +Y++    LD +++ F  MIE++  +W+ +I+A +  G    A++ ++    V  I 
Sbjct: 265 ILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYER-DPVKSI- 322

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSM 615
              A  TA+++  +  G +DD   +F+ +
Sbjct: 323 ---ACRTALITGLAQCGRIDDARILFEQI 348


>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Brachypodium distachyon]
          Length = 689

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 197/618 (31%), Positives = 333/618 (53%), Gaps = 16/618 (2%)

Query: 126 WTTFLSA--CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           W   L+A   + +G +  A  VFD++P  D   +N+++T     G       L R MH  
Sbjct: 27  WNQLLTAYSLSPLG-LAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQ 85

Query: 184 DVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V  + ++  S L S   A     G QL SL  KSG +  V   +AL+ MY  CG V DA
Sbjct: 86  GVAANTFALGSSLRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDA 145

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+       + +S+N ++ G    G+V +AL  F +M    L P E TF ++++A  
Sbjct: 146 RRVFDGMPER--NTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALLTAFD 203

Query: 303 CPR--VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNT 359
                + +Q+H + +K G     +VSNAAIT YS CG + E+  IF ++ + +D++SWN 
Sbjct: 204 DSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNA 263

Query: 360 MISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIE--MVEMIHAFVFING 416
           M+  Y    +   A+  ++ M +  G++ D ++F S++++    +      IH  V  NG
Sbjct: 264 MLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDDHQGRAIHGLVIKNG 323

Query: 417 IITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +     V NALI+ Y +   N  ++ A + F ++  ++ ++WN+++ G+  +      L+
Sbjct: 324 LEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALR 383

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +  + +R DEY  S AL SC+ ++ L+ G+QIHG ++ +   S   + +++I +Y+
Sbjct: 384 FFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYS 443

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           K G LD + + F    +  ++ WN++I  YAQHG      S F  M ++ ++  D  TF 
Sbjct: 444 KSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVEL-KVPLDHVTFV 502

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            ++++CSHAGLVD+G+ I ++M   YG     +H +C +DL GRAG L++A+ +I+S   
Sbjct: 503 GLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPF 562

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W  L  AC  HGN+ L   +A  LL  E  + S Y+LLS++Y+  G+W + A +
Sbjct: 563 EPDAMVWMTLLGACRIHGNMELASEVASHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIV 622

Query: 714 RELLKRTGVIKQPGCSWI 731
           +  +K  G+ K PG SWI
Sbjct: 623 QREMKNRGLSKVPGWSWI 640



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 264/577 (45%), Gaps = 54/577 (9%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   I      S   LL  ++S      +G +  A  L   +H+   +  + ++L ++
Sbjct: 45  RRVFDEIPRPDAASWNSLLTAHVS------AGAHPAAWCLLRAMHA-QGVAANTFALGSS 97

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L + A  R  A G QL + A ++GL      A+ +L +Y                     
Sbjct: 98  LRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMY--------------------- 136

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                      K G V  A  VFD MP+R+   +NA+I G  E+G     + LF  M   
Sbjct: 137 ----------AKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETE 186

Query: 184 DVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            +  D  +FA++L+  D        QLH  + K G +  ++V NA IT Y  CG + ++ 
Sbjct: 187 RLVPDEATFAALLTAFDDSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESR 246

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACL 302
           ++F++  G   D IS+N M+      G   +A+  F  M+  S ++    +F S++S   
Sbjct: 247 RIFDQI-GDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIIST-- 303

Query: 303 CPR----VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK---IDEACMIFARLQEKDIV 355
           CP      G  +H   +K+G E  T V NA I MY+       +++AC  F  L  KD V
Sbjct: 304 CPEHDDHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTV 363

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFV 412
           SWN+M++ Y+Q NL   A+  +  MQS  IR DE+ F + L S   + ++++   IH  +
Sbjct: 364 SWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQIHGSI 423

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             +G  +N  VS++LI  Y+K+  +  A + F      + + WN++I G+  +G      
Sbjct: 424 IHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQHGHAHIVH 483

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITL 531
             F+E++  ++  D  T    ++SC+    +  G +I +    +  +  +M      + L
Sbjct: 484 SLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYGIPLRMEHYACGVDL 543

Query: 532 YAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHG 567
           Y + G L+ +  + + M  E D + W  L+ A   HG
Sbjct: 544 YGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHG 580


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 166/485 (34%), Positives = 290/485 (59%), Gaps = 11/485 (2%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           +++ +M+   A +G   +A+  F DM ++   P   T+ SV+SAC       +G Q+H++
Sbjct: 17  VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 76

Query: 314 AMKSGFEAYTSVSNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQR-NL 369
            ++ G      V  + + MY+ C   G +D++  +F ++ E +++SW  +I+ YAQ    
Sbjct: 77  VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 136

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNA 426
            + AI  + +M S  IRP+ F+F S+L + G +      E ++++    GI +   V N+
Sbjct: 137 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 196

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LIS YA++ R++ A + F  +  +N++++N +++G+  N    +    F+E+  + +   
Sbjct: 197 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T +  LS  A I ++  G+QIHG +LK    S   + NA+I++Y++CG+++ + +VFN
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M +++ ISW ++I+ +A+HG    A+  F  M + G  KP++ T+ AVLSACSH G++ 
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSHVGMIS 375

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G + F+SM  ++G +P  +H +CM+DLLGR+G L EA   INS  + A +  W  L  A
Sbjct: 376 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN  LGR  A ++LE+E D P+ Y+LLSN++A+AG W++   IR+ +K   +IK+ 
Sbjct: 436 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 495

Query: 727 GCSWI 731
           GCSWI
Sbjct: 496 GCSWI 500



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 236/439 (53%), Gaps = 15/439 (3%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-D 200
           A +VFDKMP+R+L  +  MIT   + G     I LF +M       D ++++SVLS C +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC---GNVVDACKVFEEAKGYVCDHI 257
            GLL  G+QLHS V + G +  V V  +L+ MY  C   G+V D+ KVFE+   +  + +
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVM 121

Query: 258 SYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           S+  ++   A  G  + EA+  F  M+   +RP+  +F SV+ AC     P  G QV++ 
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K G  +   V N+ I+MY+  G++++A   F  L EK++VS+N ++  YA+      A
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
            L + E+   GI    FTF SLL   AS G +   E IH  +   G  +N  + NALIS 
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y++   I+ A+Q+F+ M  RN+I+W ++I GF  +GF  + L+ F ++L +  +P+E T 
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 491 SVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
              LS+C+ +  +  G K  +    ++ ++ +M     M+ L  + G L  ++   N M 
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 549 IEKDTISWNALISAYAQHG 567
           +  D + W  L+ A   HG
Sbjct: 422 LMADALVWRTLLGACRVHG 440



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 245/486 (50%), Gaps = 43/486 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+   + +   ++ G  +DA+ LF+ +  S  + PD ++ S+ L+AC  L   A G QLH
Sbjct: 16  LVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLH 74

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  +R GL     V  +++ +Y                            + C   G VD
Sbjct: 75  SRVIRLGLALDVCVGCSLVDMY----------------------------AKCAADGSVD 106

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC 199
            + +VF++MP+ ++  + A+IT   ++G  D   I LF +M    +R +++SF+SVL  C
Sbjct: 107 DSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 166

Query: 200 DAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                 + G Q++S   K G + +  V N+LI+MY   G + DA K F+    +  + +S
Sbjct: 167 GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL--FEKNLVS 224

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           YN ++DG A   + EEA + F ++    +  S  TF S++S          G Q+H + +
Sbjct: 225 YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLL 284

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G+++   + NA I+MYS CG I+ A  +F  +++++++SW +MI+ +A+      A+ 
Sbjct: 285 KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALE 344

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAY 431
            + +M   G +P+E T+ ++L++   + M+    +  ++    +GI+  ++    ++   
Sbjct: 345 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 404

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            ++  + +A +  ++M    + + W TL+    ++G    G +H +E+++ E  PD+   
Sbjct: 405 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMIL-EQEPDDPAA 462

Query: 491 SVALSS 496
            + LS+
Sbjct: 463 YILLSN 468



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 181/334 (54%), Gaps = 10/334 (2%)

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GF 401
           +F ++ E+++V+W  MI+ +AQ    R AI  +L+M+  G  PD FT+ S+L++    G 
Sbjct: 7   VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTL 458
           + + + +H+ V   G+  ++ V  +L+  YAK   +  +  + ++F  M   N+++W  +
Sbjct: 67  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126

Query: 459 INGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           I  +  +G    + ++ F +++   +RP+ ++ S  L +C  +S    G+Q++ Y +K  
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + S   +GN++I++YA+ G ++ + + F+++ EK+ +S+NA++  YA++ + +EA   F 
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            + D G I     TF ++LS  +  G +  G +I   ++   G+   +   + ++ +  R
Sbjct: 247 EIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSR 304

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            G ++ A +V N         +W ++ +  A HG
Sbjct: 305 CGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 337



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 192/430 (44%), Gaps = 61/430 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++A+ LF ++ S H ++P+ +S S+ L AC NL +   G Q+++YA++ G+ +   V N+
Sbjct: 138 KEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 196

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++S+Y                                + G ++ A + FD + +++L  Y
Sbjct: 197 LISMY-------------------------------ARSGRMEDARKAFDILFEKNLVSY 225

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTK 216
           NA++ G  +N   +    LF E+    +    ++FAS+LS     G +  G Q+H  + K
Sbjct: 226 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 285

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G+     + NALI+MY  CGN+  A +VF E +    + IS+  M+ G A  G    AL
Sbjct: 286 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRAL 343

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM--KSGFEAYTSVSNAAI 330
             F  ML    +P+E+T+V+V+SA  C  VG     Q H  +M  + G           +
Sbjct: 344 EMFHKMLETGTKPNEITYVAVLSA--CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401

Query: 331 TMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQSVGIR 386
            +    G + EA      +    D + W T++     +    LGR A    LE +     
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE----- 456

Query: 387 PDE----FTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISAYAKNERI 437
           PD+        +L AS+G  + V  I   +    +I       I+V N +   +      
Sbjct: 457 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 516

Query: 438 KQAYQIFHNM 447
            QA+QI+  +
Sbjct: 517 PQAWQIYQEL 526



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 6/214 (2%)

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           AY++F  M  RN++TW  +I  F   G     +  F ++ +S   PD +T S  LS+C  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC---GDLDCSLRVFNMMIEKDTISW 556
           +  L  GKQ+H  V++  L   + +G +++ +YAKC   G +D S +VF  M E + +SW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 557 NALISAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            A+I+AYAQ GE  KEA+  F  M   G I+P+  +F++VL AC +      G +++   
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           V   G        + ++ +  R+G +++A +  +
Sbjct: 183 VK-LGIASVNCVGNSLISMYARSGRMEDARKAFD 215


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 205/625 (32%), Positives = 318/625 (50%), Gaps = 17/625 (2%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P ++     L+   K G    A ++FDKM   ++  YN++I+G  +    D  + LF + 
Sbjct: 92  PCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKA 151

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            +L ++ D Y+ A  L+ C  +G L  G+ +H L+   G    V + N+LI MY  CG V
Sbjct: 152 RRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQV 211

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A  +F+ +     D +S+N ++ G    G+ EE L   + M    L  +  T  S + 
Sbjct: 212 DYARILFDHSDKL--DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALK 269

Query: 300 ACL-----CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           AC      C   G  +H  A+K G      V  A + MY+  G +D+A  IF ++ +K++
Sbjct: 270 ACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNV 329

Query: 355 VSWNTMISTYAQRNL-----GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVE 406
           V +N M++   Q+          A+  + EM+S GI+P  FT+ SLL +   +E     +
Sbjct: 330 VMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAK 389

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +HA +  NG++++  + + LI  Y+    +  A   F+++    I+    +I G+L NG
Sbjct: 390 QVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNG 449

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
                L  F ELL  E +PDE+  S  +SSCA +  LR G+QI G+  K  +       N
Sbjct: 450 EFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQN 509

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           + I +YAK GDL  +   F  M   D +SW+ +I + AQHG   EA+  F+ M+  G I+
Sbjct: 510 SQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCG-IE 568

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P+   F  VL ACSH GLV++G R FD+M  DY       H  C++DLLGRAG L +AE 
Sbjct: 569 PNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAES 628

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I     +     W AL SAC  H +    + +A  ++E E    + YVLL NIY  AG 
Sbjct: 629 LILRLGFEHEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGN 688

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
              A+ +R L++   + K+PG SWI
Sbjct: 689 KLAASKVRTLMEERRIKKEPGLSWI 713



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 206/430 (47%), Gaps = 16/430 (3%)

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           V S    G L  G+ +HS + K+ F   + + N L+ MY  CG+   A K+F++      
Sbjct: 66  VQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSK--S 123

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           + ++YN ++ G   +  +++ +I F       L+  + T    ++AC        G  +H
Sbjct: 124 NIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIH 183

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +  G  +   ++N+ I MYS CG++D A ++F    + D VSWN++I+ Y Q     
Sbjct: 184 GLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYE 243

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS-----SGFIEMVEMIHAFVFINGIITNIQVSNA 426
             +    +M   G+  + +T GS L +     +G      M+H      G+  ++ V  A
Sbjct: 244 ELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTA 303

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL-----NGFPVQGLQHFSELLMS 481
           L+  YAK   +  A QIF  M  +N++ +N ++ G L      +    + L  F E+   
Sbjct: 304 LLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSC 363

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++P  +T S  L +C  +   +  KQ+H  + KN L+S   +G+ +I LY+  G +  +
Sbjct: 364 GIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDA 423

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           L  FN +     +   A+I  Y Q+GE + A+S F  +      KPD+   + ++S+C++
Sbjct: 424 LLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEE-KPDEFIXSTIMSSCAN 482

Query: 602 AGLVDDGTRI 611
            G++  G +I
Sbjct: 483 MGMLRSGEQI 492



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 183/393 (46%), Gaps = 48/393 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA--FGNQLHAY 82
           N  +A   ++G Y++ L +  ++H +  L  + Y+L + L AC++  N    FG  LH +
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKMHQN-GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDH 288

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A++ GL                               + DV   T  L    K G +D A
Sbjct: 289 AIKLGL-------------------------------HLDVVVGTALLDMYAKTGSLDDA 317

Query: 143 CEVFDKMPDRDLPVYNAMITG-CTENGYED----IGIGLFREMHKLDVRRDNYSFASVLS 197
            ++FD+M D+++ +YNAM+ G   +   ED      + LF EM    ++   ++++S+L 
Sbjct: 318 IQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLK 377

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C      +F +Q+H+L+ K+G      + + LI +Y   G+++DA   F          
Sbjct: 378 ACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTI-- 435

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           +    M+ G    G  E AL  F ++L    +P E    ++MS+C      R G Q+   
Sbjct: 436 VPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGH 495

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A K G   +T   N+ I MY+  G +  A + F +++  DIVSW+TMI + AQ      A
Sbjct: 496 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 555

Query: 374 ILAYLEMQSVGIRPDEFTF-GSLLASS--GFIE 403
           +  +  M+S GI P+ F F G L+A S  G +E
Sbjct: 556 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 588



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 192/359 (53%), Gaps = 18/359 (5%)

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G  VH+  +K+ F     + N  + MY  CG    A  +F ++ + +IV++N++IS Y Q
Sbjct: 78  GKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQ 137

Query: 367 -RNLGRSAILAYLEMQSVGIRPDEFT-FGSLLA--SSGFIEMVEMIHAFVFINGIITNIQ 422
             NL +  IL + + + +G++ D++T  G+L A   SG +   +MIH  + + G+ + + 
Sbjct: 138 MSNLDKVMIL-FDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVV 196

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           ++N+LI  Y+K  ++  A  +F +    + ++WN+LI G++ NG   + L    ++  + 
Sbjct: 197 LTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNG 256

Query: 483 LRPDEYTLSVALSSCAR--ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           L  + YTL  AL +C+         G  +H + +K  L   + +G A++ +YAK G LD 
Sbjct: 257 LAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDD 316

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHG--EGK---EAVSCFKAMQDVGRIKPDQATFTAV 595
           ++++F+ M++K+ + +NA+++   Q    E K   +A++ F  M+  G IKP   T++++
Sbjct: 317 AIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCG-IKPSMFTYSSL 375

Query: 596 LSACSHAGLVDD--GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
           L AC    +V+D    +   +++   G +  E   S ++DL    G + +A    NS H
Sbjct: 376 LKACI---IVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIH 431



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 164/307 (53%), Gaps = 23/307 (7%)

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE------------M 407
           M+   +++++   A L  + + S  + P  ++   LL S  ++++V+            +
Sbjct: 22  MLPFSSRQSIESFATLGSVSLSSSQVFP-AYSSTFLLESVDYVKLVQSATKTGKLNHGKL 80

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+ +        + + N L++ Y K    + A ++F  MS  NI+T+N+LI+G++    
Sbjct: 81  VHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSN 140

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +  F +     L+ D+YT + AL++C++  +L  GK IHG +L   L S++ L N+
Sbjct: 141 LDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNS 200

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+KCG +D +  +F+   + D +SWN+LI+ Y Q+G+ +E ++  + M   G +  
Sbjct: 201 LIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNG-LAF 259

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-----SCMLDLLGRAGYLD 642
           +  T  + L ACS      +G ++F +M++D+  I    HL     + +LD+  + G LD
Sbjct: 260 NTYTLGSALKACSSNF---NGCKMFGTMLHDHA-IKLGLHLDVVVGTALLDMYAKTGSLD 315

Query: 643 EAERVIN 649
           +A ++ +
Sbjct: 316 DAIQIFD 322



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 5/154 (3%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G ++ AL LF ++  +++ KPD +  ST +++CAN+     G Q+  +A + G+  + 
Sbjct: 447 QNGEFESALSLFYEL-LTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFT 505

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
              N+ + +Y  + DL +    F +++NPD+ SW+T + +  + GH   A   F+ M   
Sbjct: 506 IFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSC 565

Query: 153 DLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
            +      +  ++  C+  G  + G+  F  M K
Sbjct: 566 GIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEK 599



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 3/179 (1%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           + S  +   L HGK +H +++K +    + L N ++ +Y KCGD   + ++F+ M + + 
Sbjct: 66  VQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMSKSNI 125

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +++N+LIS Y Q     + +  F   + +G +K D+ T    L+ACS +G +  G ++  
Sbjct: 126 VTYNSLISGYVQMSNLDKVMILFDKARRLG-LKLDKYTCAGALTACSQSGNLSAG-KMIH 183

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            ++  YG        + ++D+  + G +D A R++     +    +W +L +    +G 
Sbjct: 184 GLILVYGLGSQVVLTNSLIDMYSKCGQVDYA-RILFDHSDKLDGVSWNSLIAGYVQNGK 241


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 214/696 (30%), Positives = 343/696 (49%), Gaps = 56/696 (8%)

Query: 53  LKPDIYSLSTTLAAC---ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           ++PD +SLS  ++      N R    G Q+H + LR  L     +   ++ +Y      +
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
              RVF EI++                                ++ ++N MI G   +G 
Sbjct: 223 DAWRVFVEIEDKS------------------------------NVVLWNVMIVGFGGSGI 252

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSV 225
            +  + L+       V+  + SF   L  C    ++G   FGRQ+H  V K G      V
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG---FGRQIHCDVVKMGLHNDPYV 309

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHI--SYNVMMDGLASVGRVEEALIRFRDML 283
             +L++MY  CG V +A  VF      V D     +N M+   A       AL  F  M 
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFS----CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365

Query: 284 VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
             S+ P   T  +V+S C    +   G  VHA+  K   ++ +++ +A +T+YS CG   
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLLAS 398
           +A ++F  ++EKD+V+W ++IS   +    + A+  + +M+     ++PD     S+  +
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
              +E +     +H  +   G++ N+ V ++LI  Y+K    + A ++F +MS  N++ W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N++I+ +  N  P   +  F+ +L   + PD  +++  L + +  +SL  GK +HGY L+
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             + S   L NA+I +Y KCG    +  +F  M  K  I+WN +I  Y  HG+   A+S 
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M+  G   PD  TF +++SAC+H+G V++G  IF+ M  DYG  P  +H + M+DLL
Sbjct: 666 FDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GRAG L+EA   I +  I+A S  W  L SA   H N+ LG + A  LL  E ++ S YV
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L N+Y  AGL  EAA +  L+K  G+ KQPGCSWI
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 198/726 (27%), Positives = 348/726 (47%), Gaps = 76/726 (10%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N  +  L + G Y  ALHL+ +   S      +++  + L AC+ L N ++G  +H   
Sbjct: 27  INSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSV 86

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  G +  P +A +++++Y                                K G +DYA 
Sbjct: 87  VVLGWRYDPFIATSLVNMY-------------------------------VKCGFLDYAV 115

Query: 144 EVFDK-------MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           +VFD        +  RD+ V+N+MI G  +      G+G FR M    VR D +S + V+
Sbjct: 116 QVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175

Query: 197 SV-CDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           SV C  G    E G+Q+H  + ++       +  ALI MYF  G  +DA +VF E +   
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK- 234

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            + + +NVM+ G    G  E +L  +      S++    +F   + AC        G Q+
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   +K G      V  + ++MYS CG + EA  +F+ + +K +  WN M++ YA+ + G
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
            SA+  +  M+   + PD FT  ++++     G     + +HA +F   I +   + +AL
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL 414

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRP 485
           ++ Y+K      AY +F +M  ++++ W +LI+G   NG   + L+ F ++   +  L+P
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 474

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   ++   ++CA + +LR G Q+HG ++K  L+  + +G+++I LY+KCG  + +L+VF
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF 534

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M  ++ ++WN++IS Y+++   + ++  F  M   G I PD  + T+VL A S    +
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASL 593

Query: 606 DDGTRIFDSMVNDYGF-----IPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
             G  +       +G+     IP++ HL + ++D+  + G+   AE +   + +Q +S  
Sbjct: 594 LKGKSL-------HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF--KKMQHKSLI 644

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDK----PSVYVLLSNIYAA--AGLWEEAANI 713
            W L      +G    G  I  L L  E  K    P     LS I A   +G  EE  NI
Sbjct: 645 TWNLM----IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700

Query: 714 RELLKR 719
            E +K+
Sbjct: 701 FEFMKQ 706



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 164/603 (27%), Positives = 288/603 (47%), Gaps = 49/603 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +     SG  + +L L++ +  ++ +K    S +  L AC+   N+ FG Q+H   +
Sbjct: 241 NVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL   P+V  ++LS+Y                               +K G V  A  
Sbjct: 300 KMGLHNDPYVCTSLLSMY-------------------------------SKCGMVGEAET 328

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           VF  + D+ L ++NAM+    EN Y    + LF  M +  V  D+++ ++V+S C   GL
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             +G+ +H+ + K       ++ +AL+T+Y  CG   DA  VF+  +    D +++  ++
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK--DMVAWGSLI 446

Query: 264 DGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
            GL   G+ +EAL  F DM     SL+P      SV +AC      R G QVH   +K+G
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG 506

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 V ++ I +YS CG  + A  +F  +  +++V+WN+MIS Y++ NL   +I  + 
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN 566

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M S GI PD  +  S+L   +S+  +   + +H +    GI ++  + NALI  Y K  
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
             K A  IF  M  +++ITWN +I G+  +G  +  L  F E+  +   PD+ T    +S
Sbjct: 627 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686

Query: 496 SCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDT 553
           +C     +  GK I  ++ ++  I   M     M+ L  + G L+ +      M IE D+
Sbjct: 687 ACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS 746

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ-ATFTAVLSACSHAGLVDDGTRIF 612
             W  L+SA   H   +  +    + + + R++P++ +T+  +++    AGL ++  ++ 
Sbjct: 747 SIWLCLLSASRTHHNVELGI---LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLL 803

Query: 613 DSM 615
             M
Sbjct: 804 GLM 806



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 33/204 (16%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           ++ S E ++  N  ++  SR+   + ++ LF  +  S  + PD  S+++ L A ++  + 
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLF-NLMLSQGIFPDSVSITSVLVAISSTASL 593

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  LH Y LR G+ +  H+ N ++ +Y                               
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMY------------------------------- 622

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G   YA  +F KM  + L  +N MI G   +G     + LF EM K     D+ +F 
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFL 682

Query: 194 SVLSVCD-AGLLEFGRQLHSLVTK 216
           S++S C+ +G +E G+ +   + +
Sbjct: 683 SLISACNHSGFVEEGKNIFEFMKQ 706


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 211/691 (30%), Positives = 337/691 (48%), Gaps = 46/691 (6%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRN-AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           SS    P ++ L   L AC  L +  A   +L A+ L  GL+A+      +LS Y    D
Sbjct: 23  SSPDANPLLHRL---LPACTTLPSLRALHARLLAHGLLRGLRAH----TKLLSCYAALGD 75

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L S +RV  E  +PD Y++   L      G    A  V   M  R           C   
Sbjct: 76  LASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRR-----------CPAE 124

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVN 227
             + + + L              +  + +   D G   +GR+LH  V K+G   L  V+N
Sbjct: 125 QEDVVVLSL--------------ALKAAVRSADFG---YGRRLHCDVVKAGGGDLF-VMN 166

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
            L+ MY   G++ +A KVF+       + +S+  M+ G    G  +E L+ F +M   S+
Sbjct: 167 NLVDMYAKGGDLKNARKVFDRIPDR--NVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESI 224

Query: 288 RPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            PSE T  SV+ AC        G  +H   MK G  +   ++ A + MY  CG+ ++A  
Sbjct: 225 LPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQ 284

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F  L   D+V W TMI  Y Q      A+L +++ + + I P+  T  ++L++S  +  
Sbjct: 285 VFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRN 344

Query: 405 VEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           + +   IH      G + N  V NAL+  YAK + +  A  IF  +  ++++TWN+LI G
Sbjct: 345 LSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAG 404

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  N      L  FS + +    PD  ++  ALS+C  +  L  GK  H Y +K+  +S 
Sbjct: 405 YAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSN 464

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + +  A++ LY KC DL  + RVF+ M +++T++W A+I  Y   G+   ++  F  M  
Sbjct: 465 IYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLK 524

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
              I+P++A FT++LS CSH G+V  G + F+SM + +   P+  H +CM+D+L RAG L
Sbjct: 525 -DNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNL 583

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
           +EA   I    +QA +  W A    C  H  L         ++    D P   V++SN+Y
Sbjct: 584 EEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLY 643

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
            + G W+++  IR+L+K  G++K PGCS +G
Sbjct: 644 TSYGRWDKSLAIRKLMKERGLVKLPGCSSVG 674



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 205/480 (42%), Gaps = 59/480 (12%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  ++ L LF ++     L P  Y++++ L AC  L +   G  +H   ++ GL +  
Sbjct: 205 QNGLAKEGLVLFNEMRQESIL-PSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNH 263

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +   +L +Y    +    ++VF E+   D+  WTT                        
Sbjct: 264 FITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTT------------------------ 299

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQL 210
                  MI G T+NG     + LF +   + +  ++ + A+VLS   A L  L  GR +
Sbjct: 300 -------MIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSA-SAQLRNLSLGRSI 351

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H +  K G      V+NAL+ MY  C  + DA  +F        D +++N ++ G A   
Sbjct: 352 HGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNK--DVVTWNSLIAGYAEND 409

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
              +AL+ F  M V    P  ++ V+ +SAC+C     +G   H  A+K  F +   V+ 
Sbjct: 410 MGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNT 469

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + +Y+ C  +  A  +F+ + +++ V+W  MI  Y  +     +I  + EM    I+P
Sbjct: 470 ALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQP 529

Query: 388 DEFTFGSLLASSGFIEMV--------EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           +E  F S+L++     MV         M H F     I  +++    ++   A+   +++
Sbjct: 530 NEAVFTSILSTCSHTGMVTVGKKCFESMAHYF----NITPSMKHYACMVDVLARAGNLEE 585

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
           A +    M     +  +T I    L+G  +     F+E     M  L PD     V +S+
Sbjct: 586 ALEFIQKMP----MQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSN 641



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 35/271 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G   DAL LFV      ++ P+  +++T L+A A LRN + G  +H  +++ G    
Sbjct: 305 TQNGSPLDALLLFVD-DKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEN 363

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N ++ +Y   + L   K +F  + N DV +W                         
Sbjct: 364 DVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTW------------------------- 398

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                 N++I G  EN      + LF  M       D  S  + LS C   G L  G+  
Sbjct: 399 ------NSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCF 452

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+   K  F   + V  AL+ +Y  C ++  A +VF E      + +++  M+ G    G
Sbjct: 453 HTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDR--NTVTWGAMIGGYGMQG 510

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
               ++  F +ML  +++P+E  F S++S C
Sbjct: 511 DSAGSIDLFNEMLKDNIQPNEAVFTSILSTC 541


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 187/603 (31%), Positives = 315/603 (52%), Gaps = 14/603 (2%)

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCT-ENGYEDIGIGLFREMHKLDVRRDNYS 191
           C K      A ++F +M  R L  +N ++   + E  +E++ +  F  M + + + DN++
Sbjct: 4   CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV-LYHFSHMFRDEEKPDNFT 62

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
               L  C +   + +G  +H  V K       + V ++LI MY  CG +++A ++F+E 
Sbjct: 63  LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PR 305
           +    D ++++ M+ G    G   +A+  FR M++AS + P  +T ++++SAC      R
Sbjct: 123 EK--PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  VH   ++ GF    S+ N+ +  Y+      EA  +F  + EKD++SW+T+I+ Y 
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
           Q      A+L + +M   G  P+  T   +L   A++  +E     H      G+ T ++
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-S 481
           VS AL+  Y K    ++AY +F  +  +++++W  LI+GF LNG   + ++ FS +L+ +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             RPD   +   L SC+ +  L   K  H YV+K    S   +G +++ LY++CG L  +
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            +VFN +  KDT+ W +LI+ Y  HG+G +A+  F  M     +KP++ TF ++LSACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGL+ +G RIF  MVNDY   P  +H + ++DLLGR G LD A  +              
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L  AC  H N  +   +A  L E E +    Y+L+SN+Y   G WE    +R  +K+ G
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600

Query: 722 VIK 724
           + K
Sbjct: 601 IKK 603



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 251/543 (46%), Gaps = 44/543 (8%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           +K  L + N  L +LSR   +++ L+ F  +    + KPD ++L   L AC  LR   +G
Sbjct: 21  TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYG 79

Query: 77  NQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
             +H +  +   L +  +V ++++ +Y     ++   R+F E++ PD+ +W++ +S   K
Sbjct: 80  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G    A E F +M                              +   DV  D  +  ++
Sbjct: 140 NGSPYQAVEFFRRM------------------------------VMASDVTPDRVTLITL 169

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           +S C        GR +H  V + GFS  +S+VN+L+  Y       +A  +F+       
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-- 227

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           D IS++ ++      G   EAL+ F DM+     P+  T + V+ AC        G + H
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A++ G E    VS A + MY  C   +EA  +F+R+  KD+VSW  +IS +    +  
Sbjct: 288 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347

Query: 372 SAILAY-LEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +I  + + +     RPD      +L S    GF+E  +  H++V   G  +N  +  +L
Sbjct: 348 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 407

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPD 486
           +  Y++   +  A ++F+ ++ ++ + W +LI G+ ++G   + L+ F+ ++  SE++P+
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           E T    LS+C+    +  G +I   ++ +  L   +     ++ L  + GDLD ++ + 
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527

Query: 546 NMM 548
             M
Sbjct: 528 KRM 530


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 1058

 Score =  325 bits (833), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 231/785 (29%), Positives = 374/785 (47%), Gaps = 80/785 (10%)

Query: 11  AGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN- 69
           A N  T +  L + N  +  L R G  ++A  +F ++     ++ D+ S ++ +   +  
Sbjct: 161 AKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEM-----IQRDVVSWNSMINGYSQN 215

Query: 70  --------LRNAAFGNQ-------LHAYALRAGLKAYPHV-----------ANTILSLYK 103
                   L +A  G         L  YA    ++    V            N ++S Y 
Sbjct: 216 GKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYV 275

Query: 104 NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
              DL + +++F E+   +V SW + ++       +  A E+FD+MP+R+   +  MI+G
Sbjct: 276 QNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISG 335

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSC 221
                       +F +M +   R D   F  VLS    GL  LE    L  +  K+G+  
Sbjct: 336 YVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAI-TGLDDLELIGSLRPIAIKTGYEG 394

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            V V +A++  Y   G++  A   FE       +  S+  M+   A  GR+++A+  +  
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPER--NEYSWTTMIAAFAQCGRLDDAIQLYER 452

Query: 282 MLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKID 340
           +      P +             +VG    A+ +         V+ NA I  Y+  G + 
Sbjct: 453 V------PEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLK 506

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
           EA  +F ++  K+  SW  MI+ + Q    R A+   +E+   G  P + +F S L   A
Sbjct: 507 EAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACA 566

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK------------------------ 433
           + G +E+  +IH+     G   N  V N LIS YAK                        
Sbjct: 567 NIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNS 626

Query: 434 -------NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
                  N  +  A  +F  M  R++++W  +I+ ++  G     L  F ++L   ++P+
Sbjct: 627 LISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPN 686

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           + T++  LS+C  + +++ G+Q H  + K    + + +GN++IT+Y KCG  D    VF 
Sbjct: 687 QLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GFCVFE 745

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M E D I+WNA++   AQ+G GKEA+  F+ M+  G I PDQ +F  VL ACSHAGLVD
Sbjct: 746 EMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG-ILPDQMSFLGVLCACSHAGLVD 804

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G   F+SM   YG +P   H +CM+DLLGRAGYL EAE +I +  ++  S  W AL  A
Sbjct: 805 EGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 864

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ LG+ +A  L +  + K + YVLLSN++A+ G+W++ A IR+L+K  G+ K+P
Sbjct: 865 CRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEP 924

Query: 727 GCSWI 731
           G SWI
Sbjct: 925 GISWI 929



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 227/475 (47%), Gaps = 57/475 (12%)

Query: 8   ATIAGNSNT-----SKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSHKLK 54
           A IAG +       +K+L  K+ +         +A   ++   ++AL L +++H S  + 
Sbjct: 494 AIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSV- 552

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P   S ++ L+ACAN+ +   G  +H+ A++ G +   +V N ++S+Y    ++     V
Sbjct: 553 PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F  I+  D  SW + +S  ++   +D A  VF+KMP RD+  + A+I+   + G+ ++ +
Sbjct: 613 FRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVAL 672

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LF +M    ++ +  +  S+LS C + G ++ G Q H+L+ K GF   + V N+LITMY
Sbjct: 673 DLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMY 732

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           F CG     C VFEE   +  D I++N ++ G A  G  +EA+  F  M V  + P +++
Sbjct: 733 FKCGYEDGFC-VFEEMPEH--DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMS 789

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AITMYSSCGKIDE 341
           F+ V+ AC         HA  +  G+  + S++               + +    G + E
Sbjct: 790 FLGVLCAC--------SHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSE 841

Query: 342 ACMIFARLQEK-DIVSWNTMI-STYAQRN--LGRSAILAYLEMQSVGIRPDEFTF---GS 394
           A  +   +  K D V W  ++ +    RN  LG+       +M     +P   T+    +
Sbjct: 842 AEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM----TKPKSATYVLLSN 897

Query: 395 LLASSGFIEMVEMIHAFVFINGI-----ITNIQVSNAL---ISAYAKNERIKQAY 441
           L AS G  + V  I   +   G+     I+ IQV N L   ++    +++I++ Y
Sbjct: 898 LFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIY 952


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 202/653 (30%), Positives = 351/653 (53%), Gaps = 73/653 (11%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RS  +++A+  +V +  S  + PD Y+    L A   L++   G Q+HA+ ++ G ++ 
Sbjct: 53  TRSNLFREAISTYVDMILS-GVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESS 111

Query: 92  P-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              +AN++++ Y    +L             DVY                   +VFD++ 
Sbjct: 112 SVAIANSLVNFYGKCSEL------------DDVY-------------------KVFDRIN 140

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA----GLLEF 206
           +RDL  +N++I+        ++ +  FR M   D+   +++  S +  C        L  
Sbjct: 141 ERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRL 200

Query: 207 GRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDA---CKVFEEAKGYVCDHISYNVM 262
           G+Q+H    ++G +S   +  NAL+TMY N G + DA    K+FE+      + IS+N M
Sbjct: 201 GKQIHGYCFRNGHWSTFTN--NALMTMYANLGRLDDAKFLFKLFEDR-----NLISWNTM 253

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
           +   +   R  EAL+  R M++  ++P  +T  SV+ AC    +   G ++HA A++SG 
Sbjct: 254 ISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGD 313

Query: 320 EAYTS-VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               S V +A + MY +CG++     +F  + E+    WN MI+ YAQ      A++ ++
Sbjct: 314 LIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFI 373

Query: 379 EMQSV-GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN 434
           EM +V G+ P+  T  S++ +S   E     E IH +V    +  +  V NAL+  Y++ 
Sbjct: 374 EMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRM 433

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNG------FPVQGLQHFSELLMSE------ 482
            +++ +  IF +M  R+I++WNT+I G++++G        +  +QH +E +         
Sbjct: 434 RKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQA 493

Query: 483 -LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
             +P+  TL   L  CA +++L  GK+IH Y ++N L S++++G+A++ +YAKCG L+ S
Sbjct: 494 CFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLS 553

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM----QDVGRIKPDQATFTAVLS 597
            RVF+ M  K+ I+WN ++ AY  HG G+EA+  FK M     +VG +KP + T  A+L+
Sbjct: 554 RRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILA 613

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           ACSH+G+VD+G ++F  M +D+G  P  DH +C+ DLLGRAG +++A   IN+
Sbjct: 614 ACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKVEQAYDFINT 666



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 161/319 (50%), Gaps = 11/319 (3%)

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVE 406
           Q +   SW   +    + NL R AI  Y++M   G+ PD + F  +L A +G   + + +
Sbjct: 38  QSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGK 97

Query: 407 MIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            IHA V   G   +++ ++N+L++ Y K   +   Y++F  ++ R++++WN+LI+ F   
Sbjct: 98  QIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRA 157

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI---SSLRHGKQIHGYVLKNNLISKM 522
                 L+ F  +L  +L P  +TL   + +C+ +     LR GKQIHGY  +N   S  
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTF 217

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           +  NA++T+YA  G LD +  +F +  +++ ISWN +IS+++Q+    EA+   + M   
Sbjct: 218 T-NNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLE 276

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G +KPD  T  +VL ACS+  ++  G  I    +     I      S ++D+    G + 
Sbjct: 277 G-VKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVG 335

Query: 643 EAERVINSQHIQARSDNWW 661
              RV +   I  R    W
Sbjct: 336 SGRRVFDG--ILERKTGLW 352



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 139/283 (49%), Gaps = 26/283 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +++ H + AL LF+++ +   L P+  ++++ + A A   +      +H Y +
Sbjct: 353 NAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVI 412

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  L+   +V N ++ +Y   R +   K +F  ++  D+ SW T ++     G+V   C 
Sbjct: 413 KRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMIT-----GYVISGC- 466

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                       YN  +    E  + + GI       +   + ++ +  +VL  C +   
Sbjct: 467 ------------YNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAA 514

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+++H+   ++  +  V+V +AL+ MY  CG +  + +VF++    + + I++NV++
Sbjct: 515 LAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMP--IKNVITWNVIV 572

Query: 264 DGLASVGRVEEALIRFRDML-----VASLRPSELTFVSVMSAC 301
                 G  EEAL  F+DM+     V  ++P+E+T +++++AC
Sbjct: 573 MAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAAC 615


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 199/653 (30%), Positives = 338/653 (51%), Gaps = 27/653 (4%)

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM----PDRDL 154
           ++LY   +     +++  +   PD+ SW+  +S   + G  + A   + +M       + 
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 155 PVYNAMITGCT-----ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE--FG 207
             +++++ GC+     E G +   + L  EM    +  + +S ++VL+ C AGL +  +G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNAC-AGLEDENYG 207

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            ++H  + K G+       NAL+ MY   G    A  VF E      D +S+N ++ G  
Sbjct: 208 MKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK--PDIVSWNAVIAGCV 265

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTS 324
              + + AL     M    + PS  T  S + AC      ++G Q+H+  MK   E  + 
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V    I MYS CG + +A M+F  +  KD++ WN++IS Y+       A+  +  M   G
Sbjct: 326 VGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEG 385

Query: 385 IRPDEFTFGSLLASS------GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           +  ++ T  ++L S+      GF E V   H     +G   +  V+N+L+ +Y K   ++
Sbjct: 386 LEFNQTTLSTILKSTAGSQANGFCEQV---HTISIKSGYQYDGYVANSLLDSYGKCCLLE 442

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F      +++ + ++I  +   G   + L+ +  +   +++PD +  S   ++CA
Sbjct: 443 DAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACA 502

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +S+   GKQIH +VLK  L+S +  GN+++ +YAKCG +D +  +FN +  +  +SW+A
Sbjct: 503 NLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSA 562

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I   AQHG G++A+  F  M   G I P+  T  +VLSAC+HAGLV +  R F  M   
Sbjct: 563 MIGGLAQHGHGRKALQLFYQMLKNG-ILPNHITLVSVLSACNHAGLVTEARRFFGLMEKL 621

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G  P ++H +CM+D+LGR G LDEA  ++     QA +  W AL  A   H N+ LGR 
Sbjct: 622 FGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRH 681

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A +LL  E +K   ++LL+NIYA+ G+W+  A +R  +K + V K+PG SWI
Sbjct: 682 AAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWI 734



 Score =  212 bits (539), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 169/599 (28%), Positives = 280/599 (46%), Gaps = 62/599 (10%)

Query: 41  LHLFVQIHS--------SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           L L  QIH         S  + P+ +SLST L ACA L +  +G ++H Y ++ G  + P
Sbjct: 164 LELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDP 223

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
             AN +L +Y  +    +   VF EI  PD+ SW                          
Sbjct: 224 FSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSW-------------------------- 257

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
                NA+I GC  +   D+ + L  +M    V    ++ +S L  C A GL++ GRQLH
Sbjct: 258 -----NAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLH 312

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           S + K        V   LI MY  CG + DA  VF+       D I +N ++ G ++ G 
Sbjct: 313 SALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXK--DVIVWNSIISGYSNCGY 370

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-GY--QVHAQAMKSGFEAYTSVSNA 328
             EA+  F +M    L  ++ T  +++ +    +  G+  QVH  ++KSG++    V+N+
Sbjct: 371 DIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANS 430

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +  Y  C  +++A  +F     +D+V++ +MI+ Y+Q  LG  A+  YL MQ   I+PD
Sbjct: 431 LLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPD 490

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            F F SL    A+    E  + IH  V   G+++++   N+L++ YAK   I  A  IF+
Sbjct: 491 AFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFN 550

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            +S R I++W+ +I G   +G   + LQ F ++L + + P+  TL   LS+C     +  
Sbjct: 551 EISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTE 610

Query: 506 GKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSL-RVFNMMIEKDTISWNALISAY 563
            ++  G + K   I+      A M+ +  + G LD ++  V  M  +     W AL+ A 
Sbjct: 611 ARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAA 670

Query: 564 AQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA--GLVDDGTRIFDSMVN 617
             H     G+ A      ++      P+++  T +L A  +A  G+ D+  ++  SM N
Sbjct: 671 RIHKNIELGRHAAEMLLTLE------PEKSG-THILLANIYASTGMWDNVAKVRRSMKN 722



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 211/484 (43%), Gaps = 50/484 (10%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           S+++ P +++LS+ L ACA +     G QLH+  ++  ++    V   ++ +Y     L 
Sbjct: 282 SYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQ 341

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
             + VF  +   DV  W                               N++I+G +  GY
Sbjct: 342 DARMVFDLMPXKDVIVW-------------------------------NSIISGYSNCGY 370

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
           +   + LF  M+K  +  +  + +++L S   +    F  Q+H++  KSG+     V N+
Sbjct: 371 DIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANS 430

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVC---DHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           L+  Y  C  + DA KVFE     VC   D ++Y  M+   +  G  EEAL  +  M   
Sbjct: 431 LLDSYGKCCLLEDAAKVFE-----VCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDR 485

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            ++P    F S+ +AC        G Q+H   +K G  +     N+ + MY+ CG ID+A
Sbjct: 486 DIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDA 545

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
             IF  +  + IVSW+ MI   AQ   GR A+  + +M   GI P+  T  S+L++    
Sbjct: 546 SCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHA 605

Query: 403 EMVEMIHAFVFIN----GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNT 457
            +V     F  +     GI    +    ++    +  R+ +A  +   M  + +   W  
Sbjct: 606 GLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGA 665

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           L+    ++     G +H +E+L++ L P++    + L++    + +          +KN+
Sbjct: 666 LLGAARIHKNIELG-RHAAEMLLT-LEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNS 723

Query: 518 LISK 521
           L+ K
Sbjct: 724 LVKK 727


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 222/731 (30%), Positives = 357/731 (48%), Gaps = 64/731 (8%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           LK  +  A+L RS      L L  Q      ++ +  + +  L  CA  +    G ++H+
Sbjct: 13  LKRCLHTASLDRSDIASAVLDLEKQ-----AVRAENATYARLLQRCARAQALPEGRKIHS 67

Query: 82  YALRAGLKAYPH---VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
            A++  L   P    + N I+S+Y +       K  F  ++  ++YSWT  ++A    G 
Sbjct: 68  LAVKHNL--LPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQ 125

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                   ++M                ++G                VR D  +F + L  
Sbjct: 126 SKETLRALERM---------------RQDG----------------VRPDAVTFITALGS 154

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C D   L  G ++H +V  S       V NAL+ MY  CG++  A +VF + +    + I
Sbjct: 155 CGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME-RTRNVI 213

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           S+++M    A  G V EAL  FR ML+  ++ ++   V+++SAC  P +   G  +H+  
Sbjct: 214 SWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCI 273

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRS 372
             SGFE+   V+NA +TMY  CG ++EA  +F  + E  +D+VSWN M+S Y   + G+ 
Sbjct: 274 ALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKD 333

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALIS 429
           AI  Y  MQ   +R D+ T+ SLL++    E V    ++H  +  + +  N+ V NAL+S
Sbjct: 334 AIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVS 390

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE------- 482
            YAK     +A  +F  M  R+II+W T+I+ ++      +    F ++L  E       
Sbjct: 391 MYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQR 450

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           ++PD       L++CA +S+L  GK +        L S  ++G A++ LY KCG+++   
Sbjct: 451 VKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGR 510

Query: 543 RVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           R+F+ +  +  +  WNA+I+ YAQ G+  EA+  F  M+  G ++PD  +F ++L ACSH
Sbjct: 511 RIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEG-VRPDSFSFVSILLACSH 569

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            GL D G   F SM  +Y  +     H  C+ DLLGR G L EAE  +    ++  +  W
Sbjct: 570 TGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAW 629

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            +L +AC  H +L+  + +A  LL  E    + YV LSNIYA    W   A +R+ +   
Sbjct: 630 TSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQ 689

Query: 721 GVIKQPGCSWI 731
           GV K+ G S I
Sbjct: 690 GVKKERGVSTI 700


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 166/485 (34%), Positives = 290/485 (59%), Gaps = 11/485 (2%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           +++ +M+   A +G   +A+  F DM ++   P   T+ SV+SAC       +G Q+H++
Sbjct: 22  VTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSR 81

Query: 314 AMKSGFEAYTSVSNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQR-NL 369
            ++ G      V  + + MY+ C   G +D++  +F ++ E +++SW  +I+ YAQ    
Sbjct: 82  VIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGEC 141

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNA 426
            + AI  + +M S  IRP+ F+F S+L + G +      E ++++    GI +   V N+
Sbjct: 142 DKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 201

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LIS YA++ R++ A + F  +  +N++++N +++G+  N    +    F+E+  + +   
Sbjct: 202 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T +  LS  A I ++  G+QIHG +LK    S   + NA+I++Y++CG+++ + +VFN
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M +++ ISW ++I+ +A+HG    A+  F  M + G  KP++ T+ AVLSACSH G++ 
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG-TKPNEITYVAVLSACSHVGMIS 380

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G + F+SM  ++G +P  +H +CM+DLLGR+G L EA   INS  + A +  W  L  A
Sbjct: 381 EGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN  LGR  A ++LE+E D P+ Y+LLSN++A+AG W++   IR+ +K   +IK+ 
Sbjct: 441 CRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEA 500

Query: 727 GCSWI 731
           GCSWI
Sbjct: 501 GCSWI 505



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 236/439 (53%), Gaps = 15/439 (3%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-D 200
           A +VFDKMP+R+L  +  MIT   + G     I LF +M       D ++++SVLS C +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC---GNVVDACKVFEEAKGYVCDHI 257
            GLL  G+QLHS V + G +  V V  +L+ MY  C   G+V D+ KVFE+   +  + +
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVM 126

Query: 258 SYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           S+  ++   A  G  + EA+  F  M+   +RP+  +F SV+ AC     P  G QV++ 
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K G  +   V N+ I+MY+  G++++A   F  L EK++VS+N ++  YA+      A
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
            L + E+   GI    FTF SLL   AS G +   E IH  +   G  +N  + NALIS 
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y++   I+ A+Q+F+ M  RN+I+W ++I GF  +GF  + L+ F ++L +  +P+E T 
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 491 SVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
              LS+C+ +  +  G K  +    ++ ++ +M     M+ L  + G L  ++   N M 
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 549 IEKDTISWNALISAYAQHG 567
           +  D + W  L+ A   HG
Sbjct: 427 LMADALVWRTLLGACRVHG 445



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 245/486 (50%), Gaps = 43/486 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+   + +   ++ G  +DA+ LF+ +  S  + PD ++ S+ L+AC  L   A G QLH
Sbjct: 21  LVTWTLMITRFAQLGCARDAIDLFLDMELSGYV-PDRFTYSSVLSACTELGLLALGKQLH 79

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  +R GL     V  +++ +Y                            + C   G VD
Sbjct: 80  SRVIRLGLALDVCVGCSLVDMY----------------------------AKCAADGSVD 111

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC 199
            + +VF++MP+ ++  + A+IT   ++G  D   I LF +M    +R +++SF+SVL  C
Sbjct: 112 DSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 171

Query: 200 DAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                 + G Q++S   K G + +  V N+LI+MY   G + DA K F+    +  + +S
Sbjct: 172 GNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL--FEKNLVS 229

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           YN ++DG A   + EEA + F ++    +  S  TF S++S          G Q+H + +
Sbjct: 230 YNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLL 289

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G+++   + NA I+MYS CG I+ A  +F  +++++++SW +MI+ +A+      A+ 
Sbjct: 290 KGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALE 349

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAY 431
            + +M   G +P+E T+ ++L++   + M+    +  ++    +GI+  ++    ++   
Sbjct: 350 MFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLL 409

Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            ++  + +A +  ++M    + + W TL+    ++G    G +H +E+++ E  PD+   
Sbjct: 410 GRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMIL-EQEPDDPAA 467

Query: 491 SVALSS 496
            + LS+
Sbjct: 468 YILLSN 473



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 84/334 (25%), Positives = 181/334 (54%), Gaps = 10/334 (2%)

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GF 401
           +F ++ E+++V+W  MI+ +AQ    R AI  +L+M+  G  PD FT+ S+L++    G 
Sbjct: 12  VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTL 458
           + + + +H+ V   G+  ++ V  +L+  YAK   +  +  + ++F  M   N+++W  +
Sbjct: 72  LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131

Query: 459 INGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           I  +  +G    + ++ F +++   +RP+ ++ S  L +C  +S    G+Q++ Y +K  
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + S   +GN++I++YA+ G ++ + + F+++ EK+ +S+NA++  YA++ + +EA   F 
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            + D G I     TF ++LS  +  G +  G +I   ++   G+   +   + ++ +  R
Sbjct: 252 EIADTG-IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSR 309

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            G ++ A +V N         +W ++ +  A HG
Sbjct: 310 CGNIEAAFQVFNEME-DRNVISWTSMITGFAKHG 342



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 193/430 (44%), Gaps = 61/430 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++A+ LF ++ S H ++P+ +S S+ L AC NL +   G Q+++YA++ G+ +   V N+
Sbjct: 143 KEAIELFCKMISGH-IRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 201

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++S+Y                                + G ++ A + FD + +++L  Y
Sbjct: 202 LISMY-------------------------------ARSGRMEDARKAFDILFEKNLVSY 230

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTK 216
           NA++ G  +N   +    LF E+    +    ++FAS+LS     G +  G Q+H  + K
Sbjct: 231 NAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 290

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G+     + NALI+MY  CGN+  A +VF E +    + IS+  M+ G A  G    AL
Sbjct: 291 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRAL 348

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAYTSVSNAA--I 330
             F  ML    +P+E+T+V+V+SA  C  VG     Q H  +M         + + A  +
Sbjct: 349 EMFHKMLETGTKPNEITYVAVLSA--CSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406

Query: 331 TMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQSVGIR 386
            +    G + EA      +    D + W T++     +    LGR A    LE +     
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE----- 461

Query: 387 PDE----FTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISAYAKNERI 437
           PD+        +L AS+G  + V  I   +    +I       I+V N +   +      
Sbjct: 462 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSH 521

Query: 438 KQAYQIFHNM 447
            QA+QI+  +
Sbjct: 522 PQAWQIYQEL 531



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 6/214 (2%)

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           AY++F  M  RN++TW  +I  F   G     +  F ++ +S   PD +T S  LS+C  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC---GDLDCSLRVFNMMIEKDTISW 556
           +  L  GKQ+H  V++  L   + +G +++ +YAKC   G +D S +VF  M E + +SW
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 557 NALISAYAQHGE-GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            A+I+AYAQ GE  KEA+  F  M   G I+P+  +F++VL AC +      G +++   
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMIS-GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           V   G        + ++ +  R+G +++A +  +
Sbjct: 188 VK-LGIASVNCVGNSLISMYARSGRMEDARKAFD 220


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 325/622 (52%), Gaps = 15/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D   W   L      G +  A +VFD++P  D   YNA+I   +  G     I L+R M 
Sbjct: 33  DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +  V  + Y+F  VL  C A + L  GR +H+    +G    + V  ALI +Y  C    
Sbjct: 93  RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMS 299
            A  VF  AK  + D +++N M+ G A+ G    A+    DM     LRP+  T VS++ 
Sbjct: 153 PARNVF--AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210

Query: 300 ACLCPRVGYQ---VHAQAMKSGFEAYTS---VSNAAITMYSSCGKIDEACMIFARLQEKD 353
                   +Q   +HA  +++  E       +  A + MY+ C ++  AC +F  +  ++
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLL---ASSGFIEMVEMIH 409
            V+W+ +I  +   +    A   + +M   G+      +  S L   AS   + M   +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A +  +GI  ++  SN+L+S YAK   I +A   F  ++ ++ I++  L++G + NG   
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           +    F ++    + PD  T+   + +C+ +++L+HGK  HG V+   L  + S+ N++I
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAKCG +D S +VF+ M  +D +SWN +I+ Y  HG GKEA + F  M++ G   PD 
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-FAPDD 509

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF  +++ACSH+GLV +G   FD+M + YG +P  +H  CM+DLL R G LDEA + I 
Sbjct: 510 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQ 569

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S  ++A    W AL  AC  H N+ LG+ ++ ++ +   +    +VLLSNI++AAG ++E
Sbjct: 570 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDE 629

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA +R + K  G  K PG SWI
Sbjct: 630 AAEVRIIQKVKGFKKSPGYSWI 651



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 203/450 (45%), Gaps = 50/450 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  +  G Y  A+   + +     L+P+  +L + L   A       G  +HAY L
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229

Query: 85  RAGLKAYPH---VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           RA L+       +   +L +Y   + LV                               Y
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLV-------------------------------Y 258

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVCD 200
           AC VF  MP R+   ++A+I G            LF++M    +      S AS L VC 
Sbjct: 259 ACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCA 318

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G QLH+L+ KSG    ++  N+L++MY   G + +A   F+E    V D ISY
Sbjct: 319 SLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA--VKDTISY 376

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             ++ G    G+ EEA + F+ M   ++ P   T VS++ AC      + G   H   + 
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G    TS+ N+ I MY+ CGKID +  +F ++  +D+VSWNTMI+ Y    LG+ A   
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           +L M++ G  PD+ TF  L+A+   SG +   E  H F  +    GI+  ++    ++  
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLV--TEGKHWFDTMTHKYGILPRMEHYICMVDL 554

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
            A+   + +AYQ   +M  + ++  W  L+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALL 584



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 19  ELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           E+ +K  IS    L+   ++G  ++A  +F ++ + + ++PDI ++ + + AC++L    
Sbjct: 367 EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN-MEPDIATMVSLIPACSHLAALQ 425

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G   H   +  GL     + N+++ +Y     +   ++VF ++   DV SW T ++   
Sbjct: 426 HGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG 485

Query: 135 KMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM-HKLDV--RR 187
             G    A  +F  M ++    D   +  +I  C+ +G    G   F  M HK  +  R 
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRM 545

Query: 188 DNY 190
           ++Y
Sbjct: 546 EHY 548


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 202/622 (32%), Positives = 325/622 (52%), Gaps = 15/622 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D   W   L      G +  A +VFD++P  D   YNA+I   +  G     I L+R M 
Sbjct: 33  DKKQWQQELEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSML 92

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +  V  + Y+F  VL  C A + L  GR +H+    +G    + V  ALI +Y  C    
Sbjct: 93  RFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFG 152

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMS 299
            A  VF  AK  + D +++N M+ G A+ G    A+    DM     LRP+  T VS++ 
Sbjct: 153 PARNVF--AKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLP 210

Query: 300 ACLCPRVGYQ---VHAQAMKSGFEAYTS---VSNAAITMYSSCGKIDEACMIFARLQEKD 353
                   +Q   +HA  +++  E       +  A + MY+ C ++  AC +F  +  ++
Sbjct: 211 LLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRN 270

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLL---ASSGFIEMVEMIH 409
            V+W+ +I  +   +    A   + +M   G+      +  S L   AS   + M   +H
Sbjct: 271 DVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLH 330

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A +  +GI  ++  SN+L+S YAK   I +A   F  ++ ++ I++  L++G + NG   
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           +    F ++    + PD  T+   + +C+ +++L+HGK  HG V+   L  + S+ N++I
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAKCG +D S +VF+ M  +D +SWN +I+ Y  HG GKEA + F  M++ G   PD 
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQG-FAPDD 509

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF  +++ACSH+GLV +G   FD+M + YG +P  +H  CM+DLL R G LDEA + I 
Sbjct: 510 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQ 569

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S  ++A    W AL  AC  H N+ LG+ ++ ++ +   +    +VLLSNI++AAG ++E
Sbjct: 570 SMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDE 629

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA +R + K  G  K PG SWI
Sbjct: 630 AAEVRIIQKVKGFKKSPGYSWI 651



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 203/450 (45%), Gaps = 50/450 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA  +  G Y  A+   + +     L+P+  +L + L   A       G  +HAY L
Sbjct: 170 NAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCL 229

Query: 85  RAGLKAYPH---VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           RA L+       +   +L +Y   + LV                               Y
Sbjct: 230 RACLEQNEEQVLIGTALLDMYAKCKQLV-------------------------------Y 258

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVCD 200
           AC VF  MP R+   ++A+I G            LF++M    +      S AS L VC 
Sbjct: 259 ACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCA 318

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G QLH+L+ KSG    ++  N+L++MY   G + +A   F+E    V D ISY
Sbjct: 319 SLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA--VKDTISY 376

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             ++ G    G+ EEA + F+ M   ++ P   T VS++ AC      + G   H   + 
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G    TS+ N+ I MY+ CGKID +  +F ++  +D+VSWNTMI+ Y    LG+ A   
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISA 430
           +L M++ G  PD+ TF  L+A+   SG +   E  H F  +    GI+  ++    ++  
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLV--TEGKHWFDTMTHKYGILPRMEHYICMVDL 554

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
            A+   + +AYQ   +M  + ++  W  L+
Sbjct: 555 LARGGLLDEAYQFIQSMPLKADVRVWGALL 584



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 19  ELLLKLNIS----LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           E+ +K  IS    L+   ++G  ++A  +F ++ + + ++PDI ++ + + AC++L    
Sbjct: 367 EIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN-MEPDIATMVSLIPACSHLAALQ 425

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G   H   +  GL     + N+++ +Y     +   ++VF ++   DV SW T ++   
Sbjct: 426 HGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYG 485

Query: 135 KMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM-HKLDV--RR 187
             G    A  +F  M ++    D   +  +I  C+ +G    G   F  M HK  +  R 
Sbjct: 486 IHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRM 545

Query: 188 DNY 190
           ++Y
Sbjct: 546 EHY 548


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  325 bits (832), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 188/593 (31%), Positives = 330/593 (55%), Gaps = 16/593 (2%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           RDL  ++A+I+    N      I  F +M +     + Y F  V   C +   +  G+ +
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 211 HSLVTKSG-FSCLVSVVNALITMYFNC-GNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
              + K+G F   V V  ALI M+    G++  A KVF+       + +++ +M+     
Sbjct: 65  FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR--NVVTWTLMITRFQQ 122

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
           +G   +A+  F DM+++   P   T   V+SAC       +G Q H   MKSG +    V
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 326 SNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLEMQ 381
             + + MY+ C   G +D+A  +F R+   +++SW  +I+ Y Q     R AI  +LEM 
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              ++P+ FTF S+L   A+   I + E ++A V    + +   V N+LIS Y++   ++
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNME 302

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A + F  +  +N++++NT++N +  +    +  + F+E+  +    + +T +  LS  +
Sbjct: 303 NARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGAS 362

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            I ++  G+QIH  +LK+   S + + NA+I++Y++CG+++ + +VFN M + + ISW +
Sbjct: 363 SIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTS 422

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I+ +A+HG    A+  F  M + G + P++ T+ AVLSACSH GL+ +G + F SM  +
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAG-VSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVE 481

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G +P  +H +C++DLLGR+G+L+EA  ++NS   +A +        AC  HGN+ LG+ 
Sbjct: 482 HGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKH 541

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A ++LE++   P+ Y+LLSN++A+AG WEE A IR+ +K   + K+ GCSWI
Sbjct: 542 AAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWI 594



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 264/535 (49%), Gaps = 49/535 (9%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKR 113
           P+ Y  +    AC+N  N + G  +  + L+ G  ++   V   ++ ++           
Sbjct: 40  PNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGN------- 92

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                                  G ++ A +VFD+MPDR++  +  MIT   + G+    
Sbjct: 93  -----------------------GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           + LF +M       D ++ + V+S C + GLL  GRQ H LV KSG    V V  +L+ M
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDM 189

Query: 233 YFNC---GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLR 288
           Y  C   G+V DA KVF+     V + +S+  ++ G    G  + EA+  F +M+   ++
Sbjct: 190 YAKCVADGSVDDARKVFDRMP--VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+  TF SV+ AC       +G QV+A  +K    +   V N+ I+MYS CG ++ A   
Sbjct: 248 PNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKA 307

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F  L EK++VS+NT+++ YA+      A   + E++  G   + FTF SLL   +S G I
Sbjct: 308 FDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAI 367

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
              E IH+ +  +G  +N+ + NALIS Y++   I+ A+Q+F+ M   N+I+W ++I GF
Sbjct: 368 GKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGF 427

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISK 521
             +GF  + L+ F ++L + + P+E T    LS+C+ +  +  G K      +++ ++ +
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGE---GKEA 572
           M     ++ L  + G L+ ++ + N M  + D +     + A   HG    GK A
Sbjct: 488 MEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHA 542



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 242/479 (50%), Gaps = 43/479 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +    + G  +DA+ LF+ +  S  + PD ++LS  ++ACA +   + G Q H   +++G
Sbjct: 117 ITRFQQLGFSRDAVDLFLDMVLSGYV-PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSG 175

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V  +++ +Y                            + C   G VD A +VFD
Sbjct: 176 LDLDVCVGCSLVDMY----------------------------AKCVADGSVDDARKVFD 207

Query: 148 KMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLE 205
           +MP  ++  + A+ITG  ++G  D   I LF EM +  V+ ++++F+SVL  C +   + 
Sbjct: 208 RMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIW 267

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G Q+++LV K   + +  V N+LI+MY  CGN+ +A K F+    +  + +SYN +++ 
Sbjct: 268 LGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVL--FEKNLVSYNTIVNA 325

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
            A     EEA   F ++  A    +  TF S++S          G Q+H++ +KSGF++ 
Sbjct: 326 YAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSN 385

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             + NA I+MYS CG I+ A  +F  + + +++SW +MI+ +A+      A+  + +M  
Sbjct: 386 LHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLE 445

Query: 383 VGIRPDEFTFGSLLASSGFI----EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
            G+ P+E T+ ++L++   +    E ++   +    +GI+  ++    ++    ++  ++
Sbjct: 446 AGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLE 505

Query: 439 QAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +A ++ ++M  + + +   T +    ++G    G +H +E+++ E  P +    + LS+
Sbjct: 506 EAMELVNSMPFKADALVLRTFLGACRVHGNMDLG-KHAAEMIL-EQDPHDPAAYILLSN 562



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 152/271 (56%), Gaps = 10/271 (3%)

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           ++D+VSW+ +IS YA       AI A+ +M   G  P+E+ F  +    ++   I + ++
Sbjct: 4   KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63

Query: 408 IHAFVFINGII-TNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           I  F+   G   +++ V  ALI  + K N  ++ AY++F  M  RN++TW  +I  F   
Sbjct: 64  IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           GF    +  F ++++S   PD +TLS  +S+CA +  L  G+Q H  V+K+ L   + +G
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 526 NAMITLYAKC---GDLDCSLRVFNMMIEKDTISWNALISAYAQHGE-GKEAVSCFKAMQD 581
            +++ +YAKC   G +D + +VF+ M   + +SW A+I+ Y Q G   +EA+  F  M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            G++KP+  TF++VL AC++   +  G +++
Sbjct: 244 -GQVKPNHFTFSSVLKACANLSDIWLGEQVY 273



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   ++S + ++A  LF +I  +     + ++ ++ L+  +++     G Q+H
Sbjct: 316 LVSYNTIVNAYAKSLNSEEAFELFNEIEGA-GTGVNAFTFASLLSGASSIGAIGKGEQIH 374

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  L++G K+  H+ N ++S+Y    ++ +  +VF+E+ + +V SWT+ ++   K G   
Sbjct: 375 SRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFAT 434

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
            A E F KM +  +      Y A+++ C+  G    G+  F+ M   H +  R ++Y+
Sbjct: 435 RALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYA 492


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  325 bits (832), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 202/708 (28%), Positives = 347/708 (49%), Gaps = 47/708 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S  G ++  L  +  +  +H +  D Y+  + L AC++L   + G  LH   L +GL   
Sbjct: 45  SSQGAHRQVLATYASMLKTH-VPSDAYTFPSLLKACSSLNLFSLGLSLHQRILVSGLSLD 103

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            ++A+++++ Y                                K G  D A +VFD MP+
Sbjct: 104 AYIASSLINFY-------------------------------AKFGFADVARKVFDFMPE 132

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG--RQ 209
           R++  + ++I   +  G       LF EM +  ++  + +  S+L     G+ E    + 
Sbjct: 133 RNVVPWTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLL----FGVSELAHVQC 188

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH      GF   +++ N++++MY  C N+  + K+F+       D +S+N ++   A +
Sbjct: 189 LHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQR--DLVSWNSLVSAYAQI 246

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G + E L+  + M +    P   TF SV+S        ++G  +H Q +++ F+    V 
Sbjct: 247 GYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVE 306

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + I MY   G ID A  +F R  +KD+V W  MIS   Q      A+  + +M   G++
Sbjct: 307 TSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVK 366

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
               T  S++   A  G   +   +H ++F + +  +I   N+L++ +AK   + Q+  +
Sbjct: 367 SSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIV 426

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M+ RN+++WN +I G+  NG+  + L  F+E+      PD  T+   L  CA    L
Sbjct: 427 FDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQL 486

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GK IH +V++N L   + +  +++ +Y KCGDLD + R FN M   D +SW+A+I  Y
Sbjct: 487 HLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGY 546

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
             HG+G+ A+  +    + G +KP+   F +VLS+CSH GLV+ G  I++SM  D+G  P
Sbjct: 547 GYHGKGETALRFYSKFLESG-MKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAP 605

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLL RAG ++EA  +   +      D    +  AC A+GN  LG  IA  +
Sbjct: 606 NLEHHACVVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDI 665

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L  +      +V L++ YA+   WEE       ++  G+ K PG S+I
Sbjct: 666 LMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFI 713



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 278/569 (48%), Gaps = 12/569 (2%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           +NA+I   +  G     +  +  M K  V  D Y+F S+L  C +  L   G  LH  + 
Sbjct: 37  FNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRIL 96

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            SG S    + ++LI  Y   G    A KVF+       + + +  ++   +  GRV EA
Sbjct: 97  VSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPER--NVVPWTSIIGCYSRTGRVPEA 154

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
              F +M    ++PS +T +S++           +H  A+  GF +  ++SN+ ++MY  
Sbjct: 155 FSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGK 214

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           C  I+ +  +F  + ++D+VSWN+++S YAQ       +L    M+  G  PD  TFGS+
Sbjct: 215 CRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSV 274

Query: 396 L---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L   AS G +++   +H  +       +  V  +LI  Y K   I  A+++F     +++
Sbjct: 275 LSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDV 334

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           + W  +I+G + NG   + L  F ++L   ++    T++  +++CA++ S   G  +HGY
Sbjct: 335 VLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHGY 394

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           + ++ L   ++  N+++T++AKCG LD S  VF+ M +++ +SWNA+I+ YAQ+G   +A
Sbjct: 395 MFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKA 454

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F  M+   +  PD  T  ++L  C+  G +  G  I   ++ + G  P     + ++
Sbjct: 455 LFLFNEMRSDHQ-TPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN-GLRPCILVDTSLV 512

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           D+  + G LD A+R  N Q       +W A+      HG            LE    KP+
Sbjct: 513 DMYCKCGDLDIAQRCFN-QMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFLESGM-KPN 570

Query: 693 VYVLLSNIYAAA--GLWEEAANIRELLKR 719
             + LS + + +  GL E+  NI E + R
Sbjct: 571 HVIFLSVLSSCSHNGLVEQGLNIYESMTR 599



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 220/474 (46%), Gaps = 38/474 (8%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           S+N +++  +S G   + L  +  ML   +     TF S++ AC    +   G  +H + 
Sbjct: 36  SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           + SG      ++++ I  Y+  G  D A  +F  + E+++V W ++I  Y++      A 
Sbjct: 96  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             + EM+  GI+P   T  SLL     +  V+ +H    + G +++I +SN+++S Y K 
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLSMYGKC 215

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             I+ + ++F  M  R++++WN+L++ +   G+  + L     + +    PD  T    L
Sbjct: 216 RNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVL 275

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S  A    L+ G+ +HG +L+        +  ++I +Y K G++D + R+F   ++KD +
Sbjct: 276 SVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVV 335

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF-- 612
            W A+IS   Q+G   +A++ F+ M   G +K   AT  +V++AC+  G  + GT +   
Sbjct: 336 LWTAMISGLVQNGSADKALAVFRQMLKFG-VKSSTATMASVITACAQLGSYNLGTSVHGY 394

Query: 613 -------------DSMVNDYGFIPAEDHLSCMLDLLGRA---------------GYLDEA 644
                        +S+V  +      D  S + D + +                GY+ +A
Sbjct: 395 MFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKA 454

Query: 645 ERVIN---SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
             + N   S H    S    +L   CA+ G L LG+ I   ++ R   +P + V
Sbjct: 455 LFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVI-RNGLRPCILV 507



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 135/253 (53%), Gaps = 7/253 (2%)

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           I S+N +I+ ++ +   R  +  Y  M    +  D +TF SLL +   + +  +   +H 
Sbjct: 34  INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            + ++G+  +  ++++LI+ YAK      A ++F  M  RN++ W ++I  +   G   +
Sbjct: 94  RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
               F E+    ++P   T+   LS    +S L H + +HG  +    +S ++L N+M++
Sbjct: 154 AFSLFDEMRRQGIQPSSVTM---LSLLFGVSELAHVQCLHGSAILYGFMSDINLSNSMLS 210

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y KC +++ S ++F+ M ++D +SWN+L+SAYAQ G   E +   K M+  G  +PD  
Sbjct: 211 MYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQG-FEPDPQ 269

Query: 591 TFTAVLSACSHAG 603
           TF +VLS  +  G
Sbjct: 270 TFGSVLSVAASRG 282



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 33/265 (12%)

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           I ++N +IN     G   Q L  ++ +L + +  D YT    L +C+ ++    G  +H 
Sbjct: 34  INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            +L + L     + +++I  YAK G  D + +VF+ M E++ + W ++I  Y++ G   E
Sbjct: 94  RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSA--------CSHA-----GLVDDGTRIFDSMVND 618
           A S F  M+  G I+P   T  ++L          C H      G + D   + +SM++ 
Sbjct: 154 AFSLFDEMRRQG-IQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSD-INLSNSMLSM 211

Query: 619 YG-------------FIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQA---RSDNW 660
           YG             ++   D +S   ++    + GY+ E   ++ +  IQ        +
Sbjct: 212 YGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTF 271

Query: 661 WALFSACAAHGNLRLGRIIAGLLLE 685
            ++ S  A+ G L+LGR + G +L 
Sbjct: 272 GSVLSVAASRGELKLGRCLHGQILR 296


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 207/618 (33%), Positives = 328/618 (53%), Gaps = 11/618 (1%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+++    L+     G ++ A ++FD+MP  +   +  +  G + +        L   + 
Sbjct: 37  DLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLF 96

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +     + + F ++L +     L +    +H+ V K G      V  ALI  Y  CGNV 
Sbjct: 97  REGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVD 156

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A +VF+    Y  D +S+  M+   A     E++L+ F  M +   RP+  T  + + +
Sbjct: 157 AARQVFDGI--YFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKS 214

Query: 301 C---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C      +VG  VH  A+K  ++    V  A + +Y+  G+I EA   F  + + D++ W
Sbjct: 215 CNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPW 274

Query: 358 NTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVF 413
           + MIS YAQ +  + A+  +  M QS  + P+ FTF S+L   AS   + +   IH+ V 
Sbjct: 275 SLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVL 334

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G+ +N+ VSNAL+  YAK   I+ + ++F   + +N + WNT+I G++  G   + L 
Sbjct: 335 KVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALN 394

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            FS +L  +++P E T S  L + A + +L  G+QIH   +K        + N++I +YA
Sbjct: 395 LFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYA 454

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG +D +   F+ M ++D +SWNALI  Y+ HG G EA++ F  MQ     KP++ TF 
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNS-KPNKLTFV 513

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            VLSACS+AGL+D G   F SM+ DYG  P  +H +CM+ LLGR+G  DEA ++I     
Sbjct: 514 GVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPF 573

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           Q     W AL  AC  H NL LG++ A  +LE E    + +VLLSN+YA A  W+  A +
Sbjct: 574 QPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYV 633

Query: 714 RELLKRTGVIKQPGCSWI 731
           R+ +K+  V K+PG SW+
Sbjct: 634 RKNMKKKKVKKEPGLSWV 651



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 138/532 (25%), Positives = 259/532 (48%), Gaps = 28/532 (5%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ LH  + K G S  +   N L+  Y + G + DA K+F+E    + + +S+  +  G 
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMP--LTNTVSFVTLAQGF 79

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG---YQVHAQAMKSGFEAYT 323
           +   + + A      +       ++  F +++   +   +      VHA   K G +A  
Sbjct: 80  SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA 139

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  A I  YS CG +D A  +F  +  KD+VSW  M++ YA+      ++L + +M+ +
Sbjct: 140 FVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G RP+ FT  + L S   +E  ++   +H          ++ V  AL+  Y K+  I +A
Sbjct: 200 GYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEA 259

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCAR 499
            Q F  M   ++I W+ +I+ +  +    + L+ F  +  S  + P+ +T +  L +CA 
Sbjct: 260 QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +  L  G QIH  VLK  L S + + NA++ +YAKCG+++ S+++F    EK+ ++WN +
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTI 379

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI----FDSM 615
           I  Y Q G+G++A++ F  M  +  I+P + T+++VL A +    ++ G +I      +M
Sbjct: 380 IVGYVQLGDGEKALNLFSNMLGLD-IQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTM 438

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            N    +      + ++D+  + G +D+A    +    Q    +W AL    + HG   L
Sbjct: 439 YNKDSVVA-----NSLIDMYAKCGRIDDARLTFDKMDKQDEV-SWNALICGYSIHG---L 489

Query: 676 GRIIAGL--LLEREQDKPSVYVLLSNIYAA--AGLWEEA-ANIRELLKRTGV 722
           G     L  ++++   KP+    +  + A   AGL ++  A+ + +L+  G+
Sbjct: 490 GMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGI 541



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 232/499 (46%), Gaps = 45/499 (9%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +HAY  + G +A   V   ++  Y    ++ + ++VF  I   D+ SWT           
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWT----------- 174

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                                M+    EN   +  + LF +M  +  R +N++ ++ L  
Sbjct: 175 --------------------GMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKS 214

Query: 199 CDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           C+ GL  F  G+ +H    K  +   + V  AL+ +Y   G + +A + FEE      D 
Sbjct: 215 CN-GLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKD--DL 271

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSAC---LCPRVGYQVHA 312
           I +++M+   A   + +EAL  F  M  +S + P+  TF SV+ AC   +   +G Q+H+
Sbjct: 272 IPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHS 331

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K G ++   VSNA + +Y+ CG+I+ +  +F    EK+ V+WNT+I  Y Q   G  
Sbjct: 332 CVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEK 391

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           A+  +  M  + I+P E T+ S+L +S  +  +E    IH+         +  V+N+LI 
Sbjct: 392 ALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLID 451

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK  RI  A   F  M  ++ ++WN LI G+ ++G  ++ L  F  +  S  +P++ T
Sbjct: 452 MYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLT 511

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVF-NM 547
               LS+C+    L  G+     +L++  I   +     M+ L  + G  D ++++   +
Sbjct: 512 FVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI 571

Query: 548 MIEKDTISWNALISAYAQH 566
             +   + W AL+ A   H
Sbjct: 572 PFQPSVMVWRALLGACVIH 590



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 181/366 (49%), Gaps = 37/366 (10%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           ++D+L LF Q+      +P+ +++S  L +C  L     G  +H  AL+       +V  
Sbjct: 186 HEDSLLLFCQMRIM-GYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            +L LY  + ++   ++ F E+   D+  W+  +S   +      A E+F +M    + V
Sbjct: 245 ALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVV 304

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
            N                              N++FASVL  C +  LL  G Q+HS V 
Sbjct: 305 PN------------------------------NFTFASVLQACASLVLLNLGNQIHSCVL 334

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G    V V NAL+ +Y  CG + ++ K+F  +     + +++N ++ G   +G  E+A
Sbjct: 335 KVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEK--NEVAWNTIIVGYVQLGDGEKA 392

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F +ML   ++P+E+T+ SV+ A    +    G Q+H+  +K+ +   + V+N+ I M
Sbjct: 393 LNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDM 452

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG+ID+A + F ++ ++D VSWN +I  Y+   LG  A+  +  MQ    +P++ TF
Sbjct: 453 YAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTF 512

Query: 393 GSLLAS 398
             +L++
Sbjct: 513 VGVLSA 518



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 173/373 (46%), Gaps = 42/373 (11%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L+  ++ ++  ++S   ++AL LF ++  S  + P+ ++ ++ L ACA+L     GN
Sbjct: 268 KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGN 327

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           Q+H+  L+ GL +   V+N ++ +Y                                K G
Sbjct: 328 QIHSCVLKVGLDSNVFVSNALMDVY-------------------------------AKCG 356

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            ++ + ++F    +++   +N +I G  + G  +  + LF  M  LD++    +++SVL 
Sbjct: 357 EIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLR 416

Query: 198 VCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
              + + LE GRQ+HSL  K+ ++    V N+LI MY  CG + DA   F++      D 
Sbjct: 417 ASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQ--DE 474

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHA 312
           +S+N ++ G +  G   EAL  F  M  ++ +P++LTFV V+SAC    L  +      +
Sbjct: 475 VSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKS 534

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRN 368
                G E         + +    G+ DEA  +   +  +  ++ W  ++     +   +
Sbjct: 535 MLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLD 594

Query: 369 LGRSAILAYLEMQ 381
           LG+      LEM+
Sbjct: 595 LGKVCAQRVLEME 607


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  324 bits (831), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 209/698 (29%), Positives = 340/698 (48%), Gaps = 58/698 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL---KAYPHVANTILSLYKNARDLVS 110
           +P  ++     +A A L     G  +HAY++R GL        VA++++ +Y        
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMY-------- 155

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   + G V  A  +FD+MP+RD+  + A+I+GC  NG  
Sbjct: 156 -----------------------ARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC 192

Query: 171 DIGIG----LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSV 225
             G+     + R       R ++ +  S L  C   G L  G  LH    K+G     SV
Sbjct: 193 GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           V++L +MY  C +  DA  +F E      D +S+  ++      G  E+A+  F  M  +
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPEK--DLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310

Query: 286 SLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            L+P E+  +S + A L      R G   HA  ++  F     + NA I+MY+ C ++D 
Sbjct: 311 GLQPDEVV-ISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS------- 394
           A  +F  L ++D  SW++M+  Y +  L    +  Y EMQ      DEF + +       
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR--DKDEFEYDTNSLISII 427

Query: 395 -LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              +  G + + +  H +   +    N  V+NALIS Y +      A +IF  +  ++++
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           TW+ LI+ +   G     L  + ++L   ++P+  TL   +SSCA +++L HG+ IH +V
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
               L   +S+  A++ +Y KCG L  + ++F+ M+E+D ++WN +IS Y  HGE  +A+
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F +M + G +KP+  TF A+LSAC HAGLVD G  +F  M  +Y   P   H +CM+D
Sbjct: 608 KLF-SMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVD 665

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           LLG++G+L EAE V+++  I+     W  L  AC  H N  +G  +A      + +    
Sbjct: 666 LLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y+L+SN Y +A  W E   +R+++K  GV K  G S I
Sbjct: 726 YILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 309/661 (46%), Gaps = 61/661 (9%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA A+ +GL   P  A  ++S Y +A         F+    PD + W + L +  +   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS- 86

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            D+A                               +   R M     R   ++   V S 
Sbjct: 87  -DFAST-----------------------------LSAHRRMRASGARPSRFTAPLVASA 116

Query: 199 C-DAGLLEFGRQLHSLVTKSGF---SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
             + G L  G  +H+   + G       V+V ++L+ MY  CG+V DA ++F+E      
Sbjct: 117 AAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-- 174

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVAS----LRPSELTFVSVMSACLC---PRVG 307
           D +++  ++ G    G+  E L     M+ ++     RP+  T  S + AC       VG
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +H   +K+G     SV ++  +MY+ C   ++A ++F  L EKD+VSW ++I  Y + 
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
                A+  +L M+  G++PDE     LLA  G    V   +  HA +       ++ + 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM---S 481
           NALIS YAK +++  A  +F  +  R+  +W++++  +   G  ++ L+ + E+      
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           E   D  +L   +SSC+R+  LR G+  H Y +K+      S+ NA+I++Y +CG+ D +
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F M+  KD ++W+ALIS+Y+  G  K+A+  +  M   G +KP+ AT  +V+S+C++
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEG-VKPNSATLVSVISSCAN 533

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
              ++ G  +  S V D G        + ++D+  + G L  A ++ +S  ++     W 
Sbjct: 534 LAALEHG-ELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWN 591

Query: 662 ALFSACAAHGN-LRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
            + S    HG  ++  ++ +  ++ER   KP+    L+ + A   AGL ++    REL  
Sbjct: 592 VMISGYGMHGEAIQALKLFS--MMERGNVKPNSLTFLAILSACCHAGLVDKG---RELFT 646

Query: 719 R 719
           R
Sbjct: 647 R 647



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 202/465 (43%), Gaps = 41/465 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+GH + A+ LF+ +  S  L+PD   +S  LA   N      G   HA  +R       
Sbjct: 293 RAGHAEKAVELFLGMEES-GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC-EVFDKMPD 151
            + N ++S+Y   + +     VF  +   D  SW++ + A  K G +D  C E++ +M  
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAG-LDLKCLELYREMQF 410

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
           RD                        ++  + D    N   + + S    G L  G+  H
Sbjct: 411 RD------------------------KDEFEYDT---NSLISIISSCSRLGRLRLGQSAH 443

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K       SV NALI+MY  CGN   A K+F   K    D ++++ ++   + +G 
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK--TKDVVTWSALISSYSHLGH 501

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            ++AL+ +  ML   ++P+  T VSV+S+C        G  +H+     G E   S+  A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG++  A  +F  + E+D+V+WN MIS Y        A+  +  M+   ++P+
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPN 621

Query: 389 EFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             TF ++L++   +G ++    +   +    +  N++    ++    K+  +++A  +  
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681

Query: 446 NM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            M   P   I W TL+    ++     GL+   +   S+   D Y
Sbjct: 682 AMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 180/423 (42%), Gaps = 80/423 (18%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G   H Y+++        VAN ++S+Y    +    +++F  ++  DV +W+  +S+ +
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
            +GH   A  ++D+M               TE                  V+ ++ +  S
Sbjct: 498 HLGHSKDALLLYDQM--------------LTEG-----------------VKPNSATLVS 526

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+S C +   LE G  +HS V   G  C +S+  AL+ MY  CG +  A K+F+      
Sbjct: 527 VISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLER- 585

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            D +++NVM+ G    G   +AL  F  M   +++P+ LTF++++SAC         HA 
Sbjct: 586 -DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC--------CHAG 636

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +  G E +T +   ++                    E ++  +  M+       LG+S 
Sbjct: 637 LVDKGRELFTRMEEYSL--------------------EPNLKHYACMVDL-----LGKSG 671

Query: 374 ILAYLE--MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN---IQVSN 425
            L   E  + ++ I PD   +G+LL +    +  EM   +    F +    +   I +SN
Sbjct: 672 HLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSN 731

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTL-INGFLLNGFPVQGLQHFSELLMSELR 484
           +  SA   NE I++   +  N      I W+T+ I GF+ N   +   QH S    SE R
Sbjct: 732 SYGSAEKWNE-IEKLRDMMKNHGVEKSIGWSTIDICGFMKN--QLTQWQH-SLFEQSEFR 787

Query: 485 PDE 487
             E
Sbjct: 788 SSE 790


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 340/698 (48%), Gaps = 58/698 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL---KAYPHVANTILSLYKNARDLVS 110
           +P  ++     +A A L     G  +HAY++R GL        VA++++ +Y        
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMY-------- 155

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   + G V  A  +FD+MP+RD+  + A+I+GC  NG  
Sbjct: 156 -----------------------ARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC 192

Query: 171 DIGIG----LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSV 225
             G+     + R       R ++ +  S L  C   G L  G  LH    K+G     SV
Sbjct: 193 GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           V++L +MY  C +  DA  +F E      D +S+  ++      G  E+A+  F  M  +
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPEK--DLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310

Query: 286 SLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            L+P E+  +S + A L      R G   HA  ++  F     + NA I+MY+ C ++D 
Sbjct: 311 GLQPDEVV-ISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS-- 399
           A  +F  L ++D  SW++M+  Y +  L    +  Y EMQ      DEF + +    S  
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR--DKDEFEYDTNSLISII 427

Query: 400 ------GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
                 G + + +  H +   +    N  V+NALIS Y +      A +IF  +  ++++
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           TW+ LI+ +   G     L  + ++L   ++P+  TL   +SSCA +++L HG+ IH +V
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
               L   +S+  A++ +Y KCG L  + ++F+ M+E+D ++WN +IS Y  HGE  +A+
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F +M + G +KP+  TF A+LSAC HAGLVD G  +F  M  +Y   P   H +CM+D
Sbjct: 608 KLF-SMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVD 665

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           LLG++G+L EAE V+++  I+     W  L  AC  H N  +G  +A      + +    
Sbjct: 666 LLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y+L+SN Y +A  W E   +R+++K  GV K  G S I
Sbjct: 726 YILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 309/661 (46%), Gaps = 61/661 (9%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA A+ +GL   P  A  ++S Y +A         F+    PD + W + L +  +   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRAS- 86

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            D+A                               +   R M     R   ++   V S 
Sbjct: 87  -DFAST-----------------------------LSAHRRMRASGARPSRFTAPLVASA 116

Query: 199 C-DAGLLEFGRQLHSLVTKSGF---SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
             + G L  G  +H+   + G       V+V ++L+ MY  CG+V DA ++F+E      
Sbjct: 117 AAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-- 174

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVAS----LRPSELTFVSVMSACLC---PRVG 307
           D +++  ++ G    G+  E L     M+ ++     RP+  T  S + AC       VG
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +H   +K+G     SV ++  +MY+ C   ++A ++F  L EKD+VSW ++I  Y + 
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
                A+  +L M+  G++PDE     LLA  G    V   +  HA +       ++ + 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM---S 481
           NALIS YAK +++  A  +F  +  R+  +W++++  +   G  ++ L+ + E+      
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           E   D  +L   +SSC+R+  LR G+  H Y +K+      S+ NA+I++Y +CG+ D +
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F M+  KD ++W+ALIS+Y+  G  K+A+  +  M   G +KP+ AT  +V+S+C++
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEG-VKPNSATLVSVISSCAN 533

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
              ++ G  +  S V D G        + ++D+  + G L  A ++ +S  ++     W 
Sbjct: 534 LAALEHG-ELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWN 591

Query: 662 ALFSACAAHGN-LRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
            + S    HG  ++  ++ +  ++ER   KP+    L+ + A   AGL ++    REL  
Sbjct: 592 VMISGYGMHGEAIQALKLFS--MMERGNVKPNSLTFLAILSACCHAGLVDKG---RELFT 646

Query: 719 R 719
           R
Sbjct: 647 R 647



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 202/465 (43%), Gaps = 41/465 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+GH + A+ LF+ +  S  L+PD   +S  LA   N      G   HA  +R       
Sbjct: 293 RAGHAEKAVELFLGMEES-GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC-EVFDKMPD 151
            + N ++S+Y   + +     VF  +   D  SW++ + A  K G +D  C E++ +M  
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAG-LDLKCLELYREMQF 410

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
           RD                        ++  + D    N   + + S    G L  G+  H
Sbjct: 411 RD------------------------KDEFEYDT---NSLISIISSCSRLGRLRLGQSAH 443

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K       SV NALI+MY  CGN   A K+F   K    D ++++ ++   + +G 
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK--TKDVVTWSALISSYSHLGH 501

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            ++AL+ +  ML   ++P+  T VSV+S+C        G  +H+     G E   S+  A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG++  A  +F  + E+D+V+WN MIS Y        A+  +  M+   ++P+
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPN 621

Query: 389 EFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             TF ++L++   +G ++    +   +    +  N++    ++    K+  +++A  +  
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681

Query: 446 NM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            M   P   I W TL+    ++     GL+   +   S+   D Y
Sbjct: 682 AMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 180/423 (42%), Gaps = 80/423 (18%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G   H Y+++        VAN ++S+Y    +    +++F  ++  DV +W+  +S+ +
Sbjct: 438 LGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYS 497

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
            +GH   A  ++D+M               TE                  V+ ++ +  S
Sbjct: 498 HLGHSKDALLLYDQM--------------LTEG-----------------VKPNSATLVS 526

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+S C +   LE G  +HS V   G  C +S+  AL+ MY  CG +  A K+F+      
Sbjct: 527 VISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLER- 585

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            D +++NVM+ G    G   +AL  F  M   +++P+ LTF++++SAC         HA 
Sbjct: 586 -DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC--------CHAG 636

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +  G E +T +   ++                    E ++  +  M+       LG+S 
Sbjct: 637 LVDKGRELFTRMEEYSL--------------------EPNLKHYACMVDL-----LGKSG 671

Query: 374 ILAYLE--MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITN---IQVSN 425
            L   E  + ++ I PD   +G+LL +    +  EM   +    F +    +   I +SN
Sbjct: 672 HLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSN 731

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTL-INGFLLNGFPVQGLQHFSELLMSELR 484
           +  SA   NE I++   +  N      I W+T+ I GF+ N   +   QH S    SE R
Sbjct: 732 SYGSAEKWNE-IEKLRDMMKNHGVEKSIGWSTIDICGFMKN--QLTQWQH-SLFEQSEFR 787

Query: 485 PDE 487
             E
Sbjct: 788 SSE 790


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 340/698 (48%), Gaps = 58/698 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL---KAYPHVANTILSLYKNARDLVS 110
           +P  ++     +A A L     G  +HAY++R GL        VA++++ +Y        
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMY-------- 155

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                                   + G V  A  +FD+MP+RD+  + A+I+GC  NG  
Sbjct: 156 -----------------------ARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQC 192

Query: 171 DIGIG----LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSV 225
             G+     + R       R ++ +  S L  C   G L  G  LH    K+G     SV
Sbjct: 193 GEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSV 252

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           V++L +MY  C +  DA  +F E      D +S+  ++      G  E+A+  F  M  +
Sbjct: 253 VSSLFSMYTKCDSTEDARILFPELPEK--DLVSWTSLIGAYCRAGHAEKAVELFLGMEES 310

Query: 286 SLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
            L+P E+  +S + A L      R G   HA  ++  F     + NA I+MY+ C ++D 
Sbjct: 311 GLQPDEVV-ISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDI 369

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS-- 399
           A  +F  L ++D  SW++M+  Y +  L    +  Y EMQ      DEF + +    S  
Sbjct: 370 AATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFR--DKDEFEYDTNSLISII 427

Query: 400 ------GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
                 G + + +  H +   +    N  V+NALIS Y +      A +IF  +  ++++
Sbjct: 428 SSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVV 487

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           TW+ LI+ +   G     L  + ++L   ++P+  TL   +SSCA +++L HG+ IH +V
Sbjct: 488 TWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHV 547

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
               L   +S+  A++ +Y KCG L  + ++F+ M+E+D ++WN +IS Y  HGE  +A+
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQAL 607

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F +M + G +KP+  TF A+LSAC HAGLVD G  +F  M  +Y   P   H +CM+D
Sbjct: 608 KLF-SMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVD 665

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           LLG++G+L EAE V+++  I+     W  L  AC  H N  +G  +A      + +    
Sbjct: 666 LLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y+L+SN Y +A  W E   +R+++K  GV K  G S I
Sbjct: 726 YILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 172/661 (26%), Positives = 309/661 (46%), Gaps = 61/661 (9%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA A+ +GL   P  A  ++S Y +A         F+    PD + W + L   ++   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLR--SRHRA 85

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            D+A                               +   R M     R   ++   V S 
Sbjct: 86  SDFAST-----------------------------LSAHRRMRASGARPSRFTAPLVASA 116

Query: 199 C-DAGLLEFGRQLHSLVTKSGF---SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
             + G L  G  +H+   + G       V+V ++L+ MY  CG+V DA ++F+E      
Sbjct: 117 AAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPER-- 174

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVAS----LRPSELTFVSVMSACLC---PRVG 307
           D +++  ++ G    G+  E L     M+ ++     RP+  T  S + AC       VG
Sbjct: 175 DVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVG 234

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +H   +K+G     SV ++  +MY+ C   ++A ++F  L EKD+VSW ++I  Y + 
Sbjct: 235 TCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRA 294

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
                A+  +L M+  G++PDE     LLA  G    V   +  HA +       ++ + 
Sbjct: 295 GHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIG 354

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM---S 481
           NALIS YAK +++  A  +F  +  R+  +W++++  +   G  ++ L+ + E+      
Sbjct: 355 NALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKD 414

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           E   D  +L   +SSC+R+  LR G+  H Y +K+      S+ NA+I++Y +CG+ D +
Sbjct: 415 EFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVA 474

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++F M+  KD ++W+ALIS+Y+  G  K+A+  +  M   G +KP+ AT  +V+S+C++
Sbjct: 475 RKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEG-VKPNSATLVSVISSCAN 533

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
              ++ G  +  S V D G        + ++D+  + G L  A ++ +S  ++     W 
Sbjct: 534 LAALEHG-ELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWN 591

Query: 662 ALFSACAAHGN-LRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
            + S    HG  ++  ++ +  ++ER   KP+    L+ + A   AGL ++    REL  
Sbjct: 592 VMISGYGMHGEAIQALKLFS--MMERGNVKPNSLTFLAILSACCHAGLVDKG---RELFT 646

Query: 719 R 719
           R
Sbjct: 647 R 647



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/465 (24%), Positives = 202/465 (43%), Gaps = 41/465 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+GH + A+ LF+ +  S  L+PD   +S  LA   N      G   HA  +R       
Sbjct: 293 RAGHAEKAVELFLGMEES-GLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSV 351

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC-EVFDKMPD 151
            + N ++S+Y   + +     VF  +   D  SW++ + A  K G +D  C E++ +M  
Sbjct: 352 LIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAG-LDLKCLELYREMQF 410

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLH 211
           RD                        ++  + D    N   + + S    G L  G+  H
Sbjct: 411 RD------------------------KDEFEYDT---NSLISIISSCSRLGRLRLGQSAH 443

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K       SV NALI+MY  CGN   A K+F   K    D ++++ ++   + +G 
Sbjct: 444 CYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK--TKDVVTWSALISSYSHLGH 501

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            ++AL+ +  ML   ++P+  T VSV+S+C        G  +H+     G E   S+  A
Sbjct: 502 SKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTA 561

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY  CG++  A  +F  + E+D+V+WN MIS Y        A+  +  M+   ++P+
Sbjct: 562 LVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPN 621

Query: 389 EFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             TF ++L++   +G ++    +   +    +  N++    ++    K+  +++A  +  
Sbjct: 622 SLTFLAILSACCHAGLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVS 681

Query: 446 NM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            M   P   I W TL+    ++     GL+   +   S+   D Y
Sbjct: 682 AMPIEPDGGI-WGTLLGACKMHDNFEMGLRVAKKAFASDPENDGY 725


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 218/774 (28%), Positives = 370/774 (47%), Gaps = 86/774 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y DAL +F ++     L P++ +  T L AC +LR+   G  LH+    A L   P  +N
Sbjct: 214 YPDALRIFREM-LLQPLAPNVITFITALGACTSLRD---GTWLHSLLHEASLGFDPLASN 269

Query: 97  TILSLYKNARDLVSVKRVFSEI---QNPDVYSWTTFLSACTKMGHVDYACEVFDKM---- 149
            ++++Y    D      VF  +   Q  D+ SW   +SA  + G    A  +F ++    
Sbjct: 270 ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEG 329

Query: 150 --PD----------------------------------RDLPVYNAMITGCTENGYEDIG 173
             P+                                  RD+ + NA+I+   + G+    
Sbjct: 330 MRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAA 389

Query: 174 IGLFREMH-KLDV------------RR-------------------DNYSFASVLSVC-D 200
             +FR +  K DV            R+                   +  SF ++L+ C +
Sbjct: 390 WAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSN 449

Query: 201 AGLLEFGRQLHSLV-TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +  L+FGR++HSL+ T+       SV   L++MY  CG++ +A  VF+E        +++
Sbjct: 450 SEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTW 509

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           NVM+   A   R +EA     +ML   + P  L+F SV+S+C C +    +    ++SG+
Sbjct: 510 NVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGY 569

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   +  A I+M+  C ++++A  +F  +   D+VSW  M+S  A+    +     +  
Sbjct: 570 RS-ACLETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRR 628

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ  G+ PD+FT  + L +   S  + + ++IHA V   G+  +I V NAL++ Y+    
Sbjct: 629 MQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGD 688

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            ++A   F  M  R++++WN +   +   G   + +  F ++ +  ++PD+ T S  L+ 
Sbjct: 689 WREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNV 748

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
               + +  GK  H    ++ L S +S+   ++ LYAKCG LD ++ +F    +   +  
Sbjct: 749 SGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLL 808

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA+I A AQHG  +EAV  F  MQ  G ++PD AT  +++SAC HAG+V++G   F +M 
Sbjct: 809 NAIIGALAQHGFSEEAVKMFWKMQQEG-VRPDVATLVSIISACGHAGMVEEGCSSFLTMK 867

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             +G  P  +H +C +DLLGRAG L+ AE++I     +  +  W +L   C   G+  LG
Sbjct: 868 EYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELG 927

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
              A  +LE +    + +V+LSNIY A G W++A   R+ +    V   PG SW
Sbjct: 928 ERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSW 981



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 183/695 (26%), Positives = 307/695 (44%), Gaps = 66/695 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK-- 89
           ++ G +  A  LF  +       P+ Y+L   L ACAN R+ A G  +HA     GL+  
Sbjct: 102 AQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERA 161

Query: 90  --AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V N ++++Y     L     VF  I   DV SWT    A        YA E   
Sbjct: 162 STTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGA--------YAQE--- 210

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                                Y D  + +FREM    +  +  +F + L  C +  L  G
Sbjct: 211 ------------------RRFYPD-ALRIFREMLLQPLAPNVITFITALGACTS--LRDG 249

Query: 208 RQLHSLVTKS--GFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMD 264
             LHSL+ ++  GF  L S  NALI MY  CG+   A  VF+  A     D +S+N M+ 
Sbjct: 250 TWLHSLLHEASLGFDPLAS--NALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMIS 307

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV----HAQAMKSGFE 320
                GR  +A+  FR + +  +RP+ +T +++++A     V +      H +  +SG+ 
Sbjct: 308 ASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYL 367

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLE 379
               + NA I+MY+ CG    A  +F R++ K D++SWNTM+     R      +  +  
Sbjct: 368 RDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 380 MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNE 435
           M   GI P++ +F ++L   ++S  ++    IH+ +           V+  L+S Y K  
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCG 487

Query: 436 RIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
            I +A  +F  M    R+++TWN ++  +  N    +      E+L   + PD  + +  
Sbjct: 488 SISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           LSSC      +  + +   +L++   S   L  A+I+++ +C +L+ +  VFN M   D 
Sbjct: 548 LSSC---YCSQEAQVLRMCILESGYRSA-CLETALISMHGRCRELEQARSVFNEMDHGDV 603

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW A++SA A++ + KE  + F+ MQ  G I PD+ T    L  C  +  +  G ++  
Sbjct: 604 VSWTAMVSATAENRDFKEVHNLFRRMQLEGVI-PDKFTLATTLDTCLASTTLGLG-KVIH 661

Query: 614 SMVNDYGF---IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           + V + G    I  E+ L   L++    G   EA     +  ++AR    W + SA  A 
Sbjct: 662 ACVTEIGLEADIAVENAL---LNMYSNCGDWREALSFFET--MKARDLVSWNIMSAAYAQ 716

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             L    ++    ++ E  KP      + +  + G
Sbjct: 717 AGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGG 751



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 177/718 (24%), Positives = 317/718 (44%), Gaps = 96/718 (13%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+   +  L +C +  + A G   H     AGL+ +  + N ++++Y             
Sbjct: 24  DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMY------------- 70

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              + G ++ A  +F KM +R++  + A+I+   + G       
Sbjct: 71  ------------------VRCGSLEEAHAIFSKMEERNVVSWTALISANAQCGAFARAFA 112

Query: 176 LFREMH-KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF----SCLVSVVNAL 229
           LFR M  +     ++Y+  ++L+ C ++  L  GR +H+++ + G     +    V NA+
Sbjct: 113 LFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAM 172

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV-EEALIRFRDMLVASLR 288
           I MY  CG++ DA  VF        D +S+  M    A   R   +AL  FR+ML+  L 
Sbjct: 173 INMYAKCGSLEDAIAVFLAIPEK--DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLA 230

Query: 289 PSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-- 346
           P+ +TF++ + AC   R G  +H+   ++        SNA I MY  CG  + A  +F  
Sbjct: 231 PNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKA 290

Query: 347 -ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGF- 401
            A  QE D+VSWN MIS   +      A+  +  ++  G+RP+  T  ++   LA+SG  
Sbjct: 291 MASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVD 350

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLIN 460
                  H  ++ +G + ++ + NA+IS YAK      A+ +F  +  + ++I+WNT++ 
Sbjct: 351 FGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLG 410

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLI 519
                    + +  F  +L++ + P++ +    L++C+   +L  G++IH  +L +    
Sbjct: 411 ASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY 470

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFK 577
            + S+   ++++Y KCG +  +  VF  M    +  ++WN ++ AYAQ+   KEA     
Sbjct: 471 VESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALM 530

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G + PD  +FT+VLS+C          ++    + + G+  A    + ++ + GR
Sbjct: 531 EMLQ-GGVLPDALSFTSVLSSC----YCSQEAQVLRMCILESGYRSACLE-TALISMHGR 584

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSA------------------------------- 666
              L++A  V N         +W A+ SA                               
Sbjct: 585 CRELEQARSVFNEMD-HGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLAT 643

Query: 667 ----CAAHGNLRLGRIIAGLLLE--REQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
               C A   L LG++I   + E   E D      LL N+Y+  G W EA +  E +K
Sbjct: 644 TLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALL-NMYSNCGDWREALSFFETMK 700



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 247/500 (49%), Gaps = 28/500 (5%)

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           ++D   D   + ++L  C D+  L  G+  H L+  +G    + + N LI MY  CG++ 
Sbjct: 18  RVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLE 77

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMS 299
           +A  +F + +    + +S+  ++   A  G    A   FR ML+ +S  P+  T V++++
Sbjct: 78  EAHAIFSKMEER--NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLN 135

Query: 300 ACLCPR---VGYQVHAQAMKSGFE----AYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           AC   R   +G  +HA   + G E      T V NA I MY+ CG +++A  +F  + EK
Sbjct: 136 ACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEK 195

Query: 353 DIVSWNTMISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF 411
           D+VSW  M   YAQ R     A+  + EM    + P+  TF + L +   +     +H+ 
Sbjct: 196 DVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSL 255

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR---NIITWNTLINGFLLNGFP 468
           +    +  +   SNALI+ Y K    + AY +F  M+ R   ++++WN +I+  +  G  
Sbjct: 256 LHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRH 315

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG--KQIHGYVLKNNLISKMSLGN 526
              +  F  L +  +RP+  TL   L++ A  S +  G  +  HG + ++  +  + +GN
Sbjct: 316 GDAMAIFRRLRLEGMRPNSVTLITILNALA-ASGVDFGAARGFHGRIWESGYLRDVVIGN 374

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           A+I++YAKCG    +  VF  +  K D ISWN ++ A        + V+ F  M   G I
Sbjct: 375 AIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG-I 433

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVN---DYGFIPAEDHLSCML-DLLGRAGYL 641
            P++ +F A+L+ACS++  +D G +I   ++    DY     E  ++ ML  + G+ G +
Sbjct: 434 DPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDY----VESSVATMLVSMYGKCGSI 489

Query: 642 DEAERVINSQHIQARSDNWW 661
            EAE V     + +RS   W
Sbjct: 490 SEAELVFKEMPLPSRSLVTW 509



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 33/188 (17%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  NI  A  +++G  ++A+ LF Q+     +KPD  + STTL         + G   H
Sbjct: 704 LVSWNIMSAAYAQAGLAKEAVLLFRQMQL-EGVKPDKLTFSTTLNVSGGSALVSDGKLFH 762

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A A  +GL +   VA  ++ LY                                K G +D
Sbjct: 763 ALAAESGLDSDVSVATGLVKLY-------------------------------AKCGKLD 791

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F    D  + + NA+I    ++G+ +  + +F +M +  VR D  +  S++S C 
Sbjct: 792 EAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACG 851

Query: 201 -AGLLEFG 207
            AG++E G
Sbjct: 852 HAGMVEEG 859


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  324 bits (831), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 188/533 (35%), Positives = 290/533 (54%), Gaps = 13/533 (2%)

Query: 209 QLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           QLH+ VT  G       +   L   Y  CG++  A  +F++    + +   +N M+ G A
Sbjct: 43  QLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQI--VLKNSFLWNSMIRGYA 100

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
                  AL  +  ML    +P   T+  V+ AC   L   +G +VHA  +  G E    
Sbjct: 101 CNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVY 160

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N+ ++MY   G ++ A ++F R+  +D+ SWNTM+S + +    R A   + +M+  G
Sbjct: 161 VGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDG 220

Query: 385 IRPDEFTFGSLLASSGFI---EMVEMIHAFVFING---IITNIQVSNALISAYAKNERIK 438
              D  T  +LL++ G +   ++ + IH +V  NG    + N  + N++I  Y   E + 
Sbjct: 221 FVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVS 280

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F  +  +++++WN+LI+G+   G   Q L+ F  +++    PDE T+   L++C 
Sbjct: 281 CARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACN 340

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           +IS+LR G  +  YV+K   +  + +G A+I +YA CG L C+ RVF+ M EK+  +   
Sbjct: 341 QISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTV 400

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +++ +  HG G+EA+S F  M   G + PD+  FTAVLSACSH+GLVD+G  IF  M  D
Sbjct: 401 MVTGFGIHGRGREAISIFYEMLGKG-VTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRD 459

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           Y   P   H SC++DLLGRAGYLDEA  VI +  ++   D W AL SAC  H N++L  I
Sbjct: 460 YSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVI 519

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  L E   D  S YV LSNIYAA   WE+  N+R L+ +  + K P  S++
Sbjct: 520 SAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFV 572



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 251/518 (48%), Gaps = 22/518 (4%)

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS----ACTKM-GHVDYACEVFDKMPD 151
           T+L    N++ L    ++ + +         T+L+    AC  + GH+ YA  +FD++  
Sbjct: 27  TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           ++  ++N+MI G   N      + L+ +M     + DN+++  VL  C D  L E GR++
Sbjct: 87  KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+LV   G    V V N++++MYF  G+V  A  VF+  +  V D  S+N MM G    G
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFD--RMLVRDLTSWNTMMSGFVKNG 204

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS--- 324
               A   F DM          T ++++SAC   +  +VG ++H   +++G         
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           + N+ I MY +C  +  A  +F  L+ KD+VSWN++IS Y +      A+  +  M  VG
Sbjct: 265 LMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVG 324

Query: 385 IRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             PDE T  S+LA+   I  + +   + ++V   G + N+ V  ALI  YA    +  A 
Sbjct: 325 AVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCAC 384

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  M  +N+     ++ GF ++G   + +  F E+L   + PDE   +  LS+C+   
Sbjct: 385 RVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSG 444

Query: 502 SLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNAL 559
            +  GK+I   + ++ ++  + +  + ++ L  + G LD +  V  NM ++ +   W AL
Sbjct: 445 LVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTAL 504

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +SA   H   K AV    + Q +  + PD  +    LS
Sbjct: 505 LSACRLHRNVKLAVI---SAQKLFELNPDGVSGYVCLS 539



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 210/460 (45%), Gaps = 57/460 (12%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           KPD ++    L AC +L     G ++HA  +  GL+   +V N+ILS+Y    D+ + + 
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VF  +   D+ SW T +S   K G    A EVF                           
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG-------------------------- 214

Query: 174 IGLFREMHKLDVRRDNY-----SFASVLSVC-DAGLLEFGRQLHSLVTKSGFS---CLVS 224
                     D+RRD +     +  ++LS C D   L+ G+++H  V ++G S   C   
Sbjct: 215 ----------DMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           ++N++I MY NC +V  A K+FE  +  V D +S+N ++ G    G   +AL  F  M+V
Sbjct: 265 LMNSIIDMYCNCESVSCARKLFEGLR--VKDVVSWNSLISGYEKCGDAFQALELFGRMVV 322

Query: 285 ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
               P E+T +SV++AC      R+G  V +  +K G+     V  A I MY++CG +  
Sbjct: 323 VGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVC 382

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS--- 398
           AC +F  + EK++ +   M++ +     GR AI  + EM   G+ PDE  F ++L++   
Sbjct: 383 ACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSH 442

Query: 399 SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWN 456
           SG + E  E+ +       +       + L+    +   + +AY +  NM  + N   W 
Sbjct: 443 SGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWT 502

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            L++   L+      L   S   + EL PD  +  V LS+
Sbjct: 503 ALLSACRLH--RNVKLAVISAQKLFELNPDGVSGYVCLSN 540


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 207/677 (30%), Positives = 333/677 (49%), Gaps = 44/677 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L AC   ++     ++H + L+    A   V + +  LY +   +V  +R+F EI NP V
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
             W                               N +I     NG  D  I L+  M  L
Sbjct: 75  ILW-------------------------------NQIIRAYAWNGPFDGAIDLYHSMLHL 103

Query: 184 DVRRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            VR + Y++  VL  C +GLL  E G ++HS     G    V V  AL+  Y  CG +V+
Sbjct: 104 GVRPNKYTYPFVLKAC-SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A ++F        D +++N M+ G +  G  ++A+     M    + P+  T V V+   
Sbjct: 163 AQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220

Query: 302 LCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              +    G  +H   ++  F+    V    + MY+ C  +  A  IF  +  ++ VSW+
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWS 280

Query: 359 TMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFI 414
            MI  Y   +  + A+  + +M     + P   T GS+L +   +  +     +H ++  
Sbjct: 281 AMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G + +I + N L+S YAK   I  A + F  M+P++ ++++ +++G + NG     L  
Sbjct: 341 LGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSI 400

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  + +S + PD  T+   L +C+ +++L+HG   HGY++     +   + NA+I +Y+K
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 460

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG +  +  VFN M   D +SWNA+I  Y  HG G EA+  F  +  +G +KPD  TF  
Sbjct: 461 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFIC 519

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           +LS+CSH+GLV +G   FD+M  D+  +P  +H  CM+D+LGRAG +DEA   I +   +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
                W AL SAC  H N+ LG  ++  +     +    +VLLSNIY+AAG W++AA+IR
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639

Query: 715 ELLKRTGVIKQPGCSWI 731
              K  G+ K PGCSWI
Sbjct: 640 ITQKDWGLKKIPGCSWI 656



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 264/585 (45%), Gaps = 53/585 (9%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y   LHL V        +P+ Y+    L AC+ L     G ++H++A   GL++   V  
Sbjct: 97  YHSMLHLGV--------RPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++  Y     LV  +R+FS + + DV +W   ++ C+  G  D A ++  +M +  +  
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTK 216
            ++ I G                                 +V +A  L  G+ LH    +
Sbjct: 209 NSSTIVGVLP------------------------------TVGEAKALGHGKALHGYCVR 238

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
             F   V V   L+ MY  C  ++ A K+F+     V + +S++ M+ G      ++EAL
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVXSDCMKEAL 296

Query: 277 IRFRDMLVA-SLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
             F  M++  ++ P+ +T  SV+ AC       R G ++H   +K G      + N  ++
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR-GRKLHCYIIKLGXVLDILLGNTLLS 355

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG ID+A   F  +  KD VS++ ++S   Q      A+  +  MQ  GI PD  T
Sbjct: 356 MYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
              +L +   +  ++     H ++ + G  T+  + NALI  Y+K  +I  A ++F+ M 
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 475

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
             +I++WN +I G+ ++G  ++ L  F +LL   L+PD+ T    LSSC+    +  G+ 
Sbjct: 476 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 535

Query: 509 IHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQH 566
               + ++ +++ +M     M+ +  + G +D +   + NM  E D   W+AL+SA   H
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              +      K +Q +G        F  + +  S AG  DD   I
Sbjct: 596 KNIELGEEVSKKIQSLG--PESTGNFVLLSNIYSAAGRWDDAAHI 638


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 186/615 (30%), Positives = 314/615 (51%), Gaps = 13/615 (2%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL--D 184
           T  LS    +G +  A  V D  P  D   Y  M+    + G     + L R+M +    
Sbjct: 59  TKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPA 118

Query: 185 VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
             + +   +  L  C  +    +GR+LH  V K+G +    V+N+L+ MY   G++ +A 
Sbjct: 119 AAQADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADGF-VMNSLVDMYAKAGDLENAR 177

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
           KVF+       + +S+  M+ G    G  EE L+ F +M   ++ PSE T VSV++AC  
Sbjct: 178 KVFDRVPER--NVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAM 235

Query: 304 P---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
                 G  +H   +K G    + +S + + MY+ C K+++A  +F  L+  DIV W  M
Sbjct: 236 LGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAM 295

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGI 417
           I  Y Q      A+  +L  + V I P+  T  +++++S  +  + +   +HA     G 
Sbjct: 296 IVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGT 355

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + +  V NAL+  YAK + + +A  IF  +  ++++ WN+++ G+  NG   + L  F+ 
Sbjct: 356 MESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNR 415

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           + M  + PD  ++  ALS+C  ++ L  GK  H Y +K   +S + +  A++ LY+KC D
Sbjct: 416 MRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCAD 475

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  + RVFN M ++++++W+A+I  Y   G+   ++  F  M     I P++  FT++LS
Sbjct: 476 LPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLK-ENIHPNEVVFTSILS 534

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSH G+V  G   FDSM   +   P+  H +CM+D++ RAG L+EA   I +  I+A  
Sbjct: 535 ACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGI 594

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W +    C  H  L  G      +     + P  YVL+SN+Y + G W+++  IR  +
Sbjct: 595 SVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWM 654

Query: 718 KRTGVIKQPGCSWIG 732
           +  G++K PGCS +G
Sbjct: 655 QEQGLVKLPGCSSVG 669



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 155/586 (26%), Positives = 280/586 (47%), Gaps = 55/586 (9%)

Query: 26  ISLANLSRSGHYQDA--LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           + L  L  +G + DA  LH  ++       + D+  LS  L AC    +  +G +LH   
Sbjct: 91  VMLGWLVDAGSHADAVALHRDMRRRCPAAAQADVV-LSLALKACVRSADFRYGRRLHCDV 149

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++AG  A   V N+++ +Y  A DL + ++VF                            
Sbjct: 150 VKAG-GADGFVMNSLVDMYAKAGDLENARKVF---------------------------- 180

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
              D++P+R++  + +M++G  +NG  + G+ LF EM + +V    Y+  SVL+ C   G
Sbjct: 181 ---DRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  GR +H  V K G S    +  +L+ MY  C  V DA +VF+E +    D + +  M
Sbjct: 238 GLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELE--FVDIVLWTAM 295

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
           + G     R  +AL  F      S+ P+ +T  +V+SA    R   +G  VHA  +K G 
Sbjct: 296 IVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGT 355

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V NA + MY+ C  + EA  IF R+  KD+V+WN+M++ Y++  +   +++ +  
Sbjct: 356 MESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNR 415

Query: 380 MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  GI PD  +  + L++      + + +  H +      ++NI V+ AL++ Y+K   
Sbjct: 416 MRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCAD 475

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A ++F++M+ RN +TW+ +I G+ + G     +  F+E+L   + P+E   +  LS+
Sbjct: 476 LPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSA 535

Query: 497 CARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTI 554
           C+    +  GK+    + ++ N+   M     M+ + A+ G+L+ +L  + NM I+    
Sbjct: 536 CSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGIS 595

Query: 555 SWNALISAYAQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            W + +     H     G+EA+    A+       P+   F  ++S
Sbjct: 596 VWGSFLHGCKLHSRLEFGEEAIKKMAALH------PETPDFYVLMS 635



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 78/338 (23%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  S +G   ++L LF ++     + PD  S+   L+AC  L +   G   H YA+
Sbjct: 394 NSMMAGYSENGMANESLVLFNRMRM-QGISPDAISVVNALSACVCLADLHIGKGFHTYAI 452

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +    +  +V   +L+LY    DL S +RVF++                           
Sbjct: 453 KYAFMSNIYVNTALLNLYSKCADLPSAQRVFND--------------------------- 485

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
               M DR+   ++AMI G    G     I LF EM K ++  +   F S+LS C   G+
Sbjct: 486 ----MTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGM 541

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +  G++    + +                +FN         +    K Y C       M+
Sbjct: 542 VTAGKEYFDSMAR----------------HFN---------ITPSMKHYAC-------MV 569

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQVHAQAMKSGFEA- 321
           D +A  G +EEAL   ++M    ++     + S +  C L  R+ +   A    +     
Sbjct: 570 DVMARAGNLEEALEFIQNM---PIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPE 626

Query: 322 ----YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
               Y  +SN    +Y+S G+ D++  I   +QE+ +V
Sbjct: 627 TPDFYVLMSN----LYTSYGRWDKSQTIRRWMQEQGLV 660


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 194/637 (30%), Positives = 343/637 (53%), Gaps = 19/637 (2%)

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
           DL + +++F E+ + +V S  T +    K G++  A  +FD M  R +  +  +I G  +
Sbjct: 57  DLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQ 116

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR-----QLHSLVTKSGFSC 221
           +        LF +M +  +  D+ + A++LS    G  EF       Q+H  V K G+  
Sbjct: 117 HNRFLEAFNLFADMCRHGMVPDHITLATLLS----GFTEFESVNEVAQVHGHVVKVGYDS 172

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            + V N+L+  Y    ++  AC +F+       D++++N ++ G +  G   +A+  F  
Sbjct: 173 TLMVCNSLLDSYCKTRSLGLACHLFKHMAEK--DNVTFNALLTGYSKEGFNHDAINLFFK 230

Query: 282 MLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M     RPSE TF +V++A +       G QVH+  +K  F     V+NA +  YS   +
Sbjct: 231 MQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDR 290

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
           I EA  +F  + E D +S+N +I+  A       ++  + E+Q       +F F +LL  
Sbjct: 291 IVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSI 350

Query: 397 -ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            A+S  +EM   IH+   +   I+ + V N+L+  YAK ++  +A +IF +++ ++ + W
Sbjct: 351 AANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPW 410

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             LI+G++  G    GL+ F E+  +++  D  T +  L +CA ++SL  GKQ+H  +++
Sbjct: 411 TALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIR 470

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           +  +S +  G+A++ +YAKCG +  +L++F  M  ++++SWNALISAYAQ+G+G  A+  
Sbjct: 471 SGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRS 530

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F+ M   G ++P+  +F ++L ACSH GLV++G + F+SM   Y   P  +H + M+D+L
Sbjct: 531 FEQMIHSG-LQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDML 589

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-Y 694
            R+G  DEAE+++     +     W ++ ++C  H N  L    A  L   +  + +  Y
Sbjct: 590 CRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPY 649

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           V +SNIYAAAG W+    +++ L+  G+ K P  SW+
Sbjct: 650 VSMSNIYAAAGEWDSVGKVKKALRERGIRKVPAYSWV 686



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/621 (25%), Positives = 294/621 (47%), Gaps = 58/621 (9%)

Query: 11  AGNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           +GN +T++ L        ++   + +   ++   + +A +LF  +   H + PD  +L+T
Sbjct: 86  SGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADM-CRHGMVPDHITLAT 144

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            L+      +     Q+H + ++ G  +   V N++L  Y   R L              
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSL-------------- 190

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
                              AC +F  M ++D   +NA++TG ++ G+    I LF +M  
Sbjct: 191 -----------------GLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQD 233

Query: 183 LDVRRDNYSFASVLSVCDAGL----LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           L  R   ++FA+VL+   AG+    +EFG+Q+HS V K  F   V V NAL+  Y     
Sbjct: 234 LGFRPSEFTFAAVLT---AGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDR 290

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +V+A K+F E      D ISYNV++   A  GRVEE+L  FR++        +  F +++
Sbjct: 291 IVEARKLFYEMPE--VDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLL 348

Query: 299 SAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           S     L   +G Q+H+QA+ +   +   V N+ + MY+ C K  EA  IFA L  +  V
Sbjct: 349 SIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSV 408

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
            W  +IS Y Q+ L    +  ++EM    I  D  T+ S+L   A+   + + + +H+ +
Sbjct: 409 PWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRI 468

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             +G ++N+   +AL+  YAK   IK+A Q+F  M  RN ++WN LI+ +  NG     L
Sbjct: 469 IRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHAL 528

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITL 531
           + F +++ S L+P+  +    L +C+    +  G Q    + +   L  +     +M+ +
Sbjct: 529 RSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDM 588

Query: 532 YAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
             + G  D + ++   M  E D I W++++++   H   + A+     + ++  ++ D A
Sbjct: 589 LCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLR-DAA 647

Query: 591 TFTAVLSACSHAGLVDDGTRI 611
            + ++ +  + AG  D   ++
Sbjct: 648 PYVSMSNIYAAAGEWDSVGKV 668



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 228/541 (42%), Gaps = 82/541 (15%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  L   S+ G   DA++LF ++      +P  ++ +  L A   + +  FG Q+H+
Sbjct: 206 VTFNALLTGYSKEGFNHDAINLFFKMQDL-GFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           + ++        VAN +L  Y     +V  +++F E+   D  S+   ++ C   G V+ 
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEE 324

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           + E                               LFRE+      R  + FA++LS+   
Sbjct: 325 SLE-------------------------------LFRELQFTRFDRRQFPFATLLSIAAN 353

Query: 202 GL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            L LE GRQ+HS    +     V V N+L+ MY  C    +A ++F +        + + 
Sbjct: 354 SLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQ--SSVPWT 411

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
            ++ G    G  E+ L  F +M  A +     T+ S++ AC       +G Q+H++ ++S
Sbjct: 412 ALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRS 471

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G  +     +A + MY+ CG I EA  +F  +  ++ VSWN +IS YAQ   G  A+ ++
Sbjct: 472 GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSF 531

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
            +M   G++P+  +F S+L +     +VE              +Q  N++   Y K E  
Sbjct: 532 EQMIHSGLQPNSVSFLSILCACSHCGLVE------------EGLQYFNSMTQVY-KLEPR 578

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL--RPDEYTLSVALS 495
           ++ Y    +M  R+                   G    +E LM+ +   PDE   S  L+
Sbjct: 579 REHYASMVDMLCRS-------------------GRFDEAEKLMARMPFEPDEIMWSSILN 619

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNA-----MITLYAKCGDLDCSLRVFNMMIE 550
           SC RI    H  Q       + L +   L +A     M  +YA  G+ D   +V   + E
Sbjct: 620 SC-RI----HKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRE 674

Query: 551 K 551
           +
Sbjct: 675 R 675



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 141/318 (44%), Gaps = 38/318 (11%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + + A +   G   N    N  +  + +   +  A ++F  M  +N+I+ NT+I G+L +
Sbjct: 27  QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86

Query: 466 G--------FP-----------------------VQGLQHFSELLMSELRPDEYTLSVAL 494
           G        F                        ++    F+++    + PD  TL+  L
Sbjct: 87  GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S      S+    Q+HG+V+K    S + + N+++  Y K   L  +  +F  M EKD +
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           ++NAL++ Y++ G   +A++ F  MQD+G  +P + TF AVL+A      ++ G ++  S
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLG-FRPSEFTFAAVLTAGIQMDDIEFGQQV-HS 264

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG--- 671
            V    F+      + +LD   +   + EA ++   +  +    ++  L + CA +G   
Sbjct: 265 FVVKCNFVWNVFVANALLDFYSKHDRIVEARKLF-YEMPEVDGISYNVLITCCAWNGRVE 323

Query: 672 -NLRLGRIIAGLLLEREQ 688
            +L L R +     +R Q
Sbjct: 324 ESLELFRELQFTRFDRRQ 341



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 79/330 (23%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G ++D L LFV++H + K+  D  + ++ L ACANL +   G QLH+  +R+G     
Sbjct: 419 QKGLHEDGLKLFVEMHRA-KIGADSATYASILRACANLASLTLGKQLHSRIIRSG----- 472

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                             +  VFS     D+Y+         K G +  A ++F +MP R
Sbjct: 473 -----------------CLSNVFSGSALVDMYA---------KCGSIKEALQMFQEMPVR 506

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
           +   +NA+I+   +NG     +  F +M    ++ ++ SF S+L  C   GL+E G Q  
Sbjct: 507 NSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQ-- 564

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
                                YFN    V   +   E          Y  M+D L   GR
Sbjct: 565 ---------------------YFNSMTQVYKLEPRRE---------HYASMVDMLCRSGR 594

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQVHAQAMKSGFEAYTS 324
            +EA    + M      P E+ + S++++C       L  +   Q+           Y S
Sbjct: 595 FDEAE---KLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVS 651

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +SN    +Y++ G+ D    +   L+E+ I
Sbjct: 652 MSN----IYAAAGEWDSVGKVKKALRERGI 677


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 196/612 (32%), Positives = 323/612 (52%), Gaps = 23/612 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A  VF  +   +   +  ++     NG+    +G +R M    +R D   F  
Sbjct: 4   KCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVV 63

Query: 195 VLSVCDAGL-LEFGRQLHSLVTKS---GFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
            + VC +   L+ G+ LH+++ ++    F  ++    ALITMY  C ++  A K F+E  
Sbjct: 64  AIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGT--ALITMYARCRDLELARKTFDEMG 121

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS---LRPSELTFVSVMSACLCP--- 304
                 +++N ++ G +  G    AL  ++DM+  S   ++P  +TF S + AC      
Sbjct: 122 KKTL--VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G ++ A+ + SG+ + + V NA I MYS CG ++ A  +F RL+ +D+++WNTMIS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
           A++     A+  +  M     +P+  TF  LL +   +E +E    IH  V  +G  +++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 422 QVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
            + N L++ Y K +  +++A Q+F  M  R++ITWN LI  ++  G     L  F ++ +
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             + P+E TLS  LS+CA + + R GK +H  +      + + L N+++ +Y +CG LD 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           ++ VF  + +K  +SW+ LI+AYAQHG  +  +  F  +   G +  D  T  + LSACS
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG-LAADDVTMVSTLSACS 478

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H G++ +G + F SMV D+G  P   H  CM+DLL RAG L+ AE +I+       +  W
Sbjct: 479 HGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 661 WALFSACAAHGNLRLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
            +L S C  H + +    +A  L E E +D+ S   LLSN+YA AG W+   ++R+   R
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DVRKTRNR 595

Query: 720 TGVIKQPGCSWI 731
               K PGCS+I
Sbjct: 596 RAARKNPGCSYI 607



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/594 (24%), Positives = 281/594 (47%), Gaps = 49/594 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R+GHY++AL  + ++     L+PD       +  C++ ++   G  LHA  L   
Sbjct: 30  VAAFARNGHYREALGYYRRM-VLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88

Query: 88  LKAYPHVANT-ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           L  +  +  T ++++Y   RDL                               + A + F
Sbjct: 89  LLEFDIILGTALITMYARCRDL-------------------------------ELARKTF 117

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLSVCD-AG 202
           D+M  + L  +NA+I G + NG     + ++++M       ++ D  +F+S L  C   G
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVG 177

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  GR++ +    SG++    V NALI MY  CG++  A KVF+  K    D I++N M
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR--DVIAWNTM 235

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGF 319
           + G A  G   +AL  F+ M     +P+ +TF+ +++AC        G  +H +  + G+
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGY 295

Query: 320 EAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           E+   + N  + MY+ C   ++EA  +F R++ +D+++WN +I  Y Q    + A+  + 
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFK 355

Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +MQ   + P+E T  ++L++    G     + +HA +       ++ + N+L++ Y +  
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +     +F  +  +++++W+TLI  +  +G    GL+HF ELL   L  D+ T+   LS
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 496 SCARISSLRHGKQIH-GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDT 553
           +C+    L+ G Q     V  + L         M+ L ++ G L+ +   + +M    D 
Sbjct: 476 ACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDA 535

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           ++W +L+S    H + K A      + ++   + + +T T + +  + AG  DD
Sbjct: 536 VAWTSLLSGCKLHNDTKRAARVADKLFEL-ESEDEHSTVTLLSNVYAEAGRWDD 588



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 228/464 (49%), Gaps = 53/464 (11%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKPDIYSLSTTLAACANLRNAAF 75
           K+ L+  N  +A  SR+G ++ AL ++  +   S   +KPD  + S+ L AC  + + + 
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++ A  + +G  +   V N ++++Y     L S ++VF  ++N DV +W T +S   K
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241

Query: 136 MGHVDYACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
            G    A E+F +M    P  ++  +  ++T CT    ED                    
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTACT--NLED-------------------- 279

Query: 192 FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV-DACKVFEEAK 250
                       LE GR +H  V + G+   + + N L+ MY  C + + +A +VFE  +
Sbjct: 280 ------------LEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMR 327

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG 307
               D I++N+++      G+ ++AL  F+ M + ++ P+E+T  +V+SAC      R G
Sbjct: 328 TR--DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VHA       +A   + N+ + MY+ CG +D+   +FA +++K +VSW+T+I+ YAQ 
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQV 423
              R+ +  + E+   G+  D+ T  S L++    G + E V+   + V  +G+  + + 
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRH 505

Query: 424 SNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLINGFLLN 465
              ++   ++  R++ A  + H+M   P + + W +L++G  L+
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLP-DAVAWTSLLSGCKLH 548



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 155/294 (52%), Gaps = 8/294 (2%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  CG + +A  +F  ++  + VSW  +++ +A+    R A+  Y  M   G+RPD   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 392 FG---SLLASSGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNM 447
           F     + +SS  ++  +++HA +    ++  +I +  ALI+ YA+   ++ A + F  M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYTLSVALSSCARISSLR 504
             + ++TWN LI G+  NG     L+ + +++      ++PD  T S AL +C  +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G++I    + +   S   + NA+I +Y+KCG L+ + +VF+ +  +D I+WN +IS YA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           + G   +A+  F+ M      KP+  TF  +L+AC++   ++ G  I   +  D
Sbjct: 241 KQGAATQALELFQRMGP-NDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVRED 293



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 119/222 (53%), Gaps = 4/222 (1%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A  +FH +   N ++W  ++  F  NG   + L ++  +++  LRPD    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            VA+  C+    L+ G+ +H  +L+  L+   + LG A+IT+YA+C DL+ + + F+ M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAM--QDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +K  ++WNALI+ Y+++G+ + A+  ++ M  +    +KPD  TF++ L AC+  G +  
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQ 181

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           G  I    V   G+       + ++++  + G L+ A +V +
Sbjct: 182 GREIEARTVAS-GYASDSIVQNALINMYSKCGSLESARKVFD 222


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 205/708 (28%), Positives = 359/708 (50%), Gaps = 76/708 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   +++ PD + +     AC  L+ + FG  +H Y ++AGL+   
Sbjct: 150 RIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCV 208

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD++P+R
Sbjct: 209 FVASSLADMY-------------------------------GKCGVLDDARKVFDEIPER 237

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           ++  +NA++ G  +NG  +  I LF +M K  V     + ++ LS   + G +E G+Q H
Sbjct: 238 NVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSH 297

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  +L+  Y   G +  A  VF+       D +++N+++ G    G 
Sbjct: 298 AIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDK--DVVTWNLIISGYVQQGL 355

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNA 328
           VE A+   + M +  L+   +T  ++MSA       ++G +V    ++  FE+   +++ 
Sbjct: 356 VENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLAST 415

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG I +A  +F    EKD++ WNT+++ YA+  L    +  +  MQ  G+ P+
Sbjct: 416 VMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPN 475

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             T+                                N +I +  +N  + +A  +F  M 
Sbjct: 476 VITW--------------------------------NLIILSLLRNGEVDEAKDMFLQMQ 503

Query: 449 PR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                 N+I+W T++NG + NG   + +    ++  S LRP+  +++VALS+CA ++SL 
Sbjct: 504 SSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLH 563

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            G+ IHGY+++N    S +S+  +++ +YAKCGD++ + +VF   +  +   +NA+ISAY
Sbjct: 564 FGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAY 623

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A +G  KEA++ +++++ VG +KPD  T T VLSAC+HAG  +  T I   MV+ +G  P
Sbjct: 624 ALYGNLKEAIALYRSLEGVG-LKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNP 682

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H   M+DLL  AG  D+A R+I     +  +    +L ++C       L   ++  L
Sbjct: 683 CLEHYGLMVDLLASAGQTDKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQL 742

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +E E D    YV +SN YA  G W+E   +RE++K  G+ K+PGCSWI
Sbjct: 743 IESEPDNSGNYVTISNAYAVEGSWDEVVKMREIMKAKGLKKKPGCSWI 790



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 272/559 (48%), Gaps = 18/559 (3%)

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSG- 218
           ++   +NG     + L  EM   ++R     +  +L  C     L  G+Q+H+ + K+G 
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGD 101

Query: 219 -FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
            ++    +   L+  Y  C  +  A  +F + +  V +  S+  ++     +G  E AL+
Sbjct: 102 FYAKNEYIETKLVIFYAKCDALDIAEVLFTKLR--VRNVFSWAAIIGVKCRIGLCEGALM 159

Query: 278 RFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F +ML   + P      +V  AC      R G  VH   +K+G E    V+++   MY 
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYG 219

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            CG +D+A  +F  + E+++V+WN ++  Y Q  +   AI  + +M+  G+ P   T  +
Sbjct: 220 KCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVST 279

Query: 395 LLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
            L++S   G +E  +  HA   +NG+  +  +  +L++ Y K   I+ A  +F  M  ++
Sbjct: 280 CLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKD 339

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           ++TWN +I+G++  G     +     + + +L+ D  TL+  +S+ AR  +L+ GK++  
Sbjct: 340 VVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQC 399

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           Y ++++  S + L + ++ +YAKCG +  + +VF+   EKD I WN L++AYA+ G   E
Sbjct: 400 YCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGE 459

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
            +  F  MQ  G + P+  T+  ++ +    G VD+   +F  M    G  P     + M
Sbjct: 460 GLRLFYGMQLEG-VPPNVITWNLIILSLLRNGEVDEAKDMFLQM-QSSGIFPNLISWTTM 517

Query: 632 LDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           ++ + + G  +EA    R +    ++  + +     SACA   +L  GR I G ++   Q
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQ 577

Query: 689 DKPSVYVLLS--NIYAAAG 705
              SV +  S  ++YA  G
Sbjct: 578 HSSSVSIETSLVDMYAKCG 596



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 157/657 (23%), Positives = 304/657 (46%), Gaps = 78/657 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG--EILQGCVYERDLCTGKQIHARILKN 99

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + +  V F++++  +V+SW   +    ++G     CE
Sbjct: 100 GDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKCRIG----LCE 155

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                           + G             F EM + ++  DN+   +V   C A   
Sbjct: 156 --------------GALMG-------------FVEMLENEIFPDNFVVPNVCKACGALQW 188

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+E      + +++N +M
Sbjct: 189 SRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER--NVVAWNALM 246

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G    G  EEA+  F DM    + P+ +T  + +SA         G Q HA A+ +G E
Sbjct: 247 VGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLE 306

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G I+ A M+F R+ +KD+V+WN +IS Y Q+ L  +AI     M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLM 366

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   ++ D  T  +L++++   + +++   +  +   +   ++I +++ ++  YAK   I
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F + + +++I WNTL+  +  +G   +GL+ F  + +  + P+  T ++ + S 
Sbjct: 427 VDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSL 486

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R   +   K                               D  L++ +  I  + ISW 
Sbjct: 487 LRNGEVDEAK-------------------------------DMFLQMQSSGIFPNLISWT 515

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +++   Q+G  +EA+   + MQ+ G ++P+  + T  LSAC++   +  G  I   ++ 
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESG-LRPNAVSITVALSACANLASLHFGRSIHGYIIR 574

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           +     +    + ++D+  + G +++AE+V  S+ + +    + A+ SA A +GNL+
Sbjct: 575 NLQHSSSVSIETSLVDMYAKCGDINKAEKVFGSK-LYSELPLYNAMISAYALYGNLK 630



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/414 (23%), Positives = 177/414 (42%), Gaps = 59/414 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  ++A+++  Q+    KLK D  +L+T ++A A  +N   G ++  Y +
Sbjct: 344 NLIISGYVQQGLVENAIYM-CQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCI 402

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R   ++   +A+T++ +Y     +V  K+VF      D+  W T L+A            
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLR 462

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G VD A ++F +M       +L  +  M+ G  
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMV 522

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R +  S    LS C +   L FGR +H  + ++   S  V
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSV 582

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A KVF        +   YN M+   A  G ++EA+  +R + 
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVF--GSKLYSELPLYNAMISAYALYGNLKEAIALYRSLE 640

Query: 284 VASLRPSELTFVSVMSAC--------LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
              L+P  +T  +V+SAC            V   V    M    E Y       + + +S
Sbjct: 641 GVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHY----GLMVDLLAS 696

Query: 336 CGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            G+ D+A  +   +  K D     +++++  ++   +S ++ YL  Q +   PD
Sbjct: 697 AGQTDKALRLIEEMPYKPDARMIQSLVASCNKQ--PKSELVDYLSRQLIESEPD 748


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 361/709 (50%), Gaps = 79/709 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   + + PD + +     AC  L+ + FG  +H Y  +AGL    
Sbjct: 114 RIGLGEGALMGFVEMLE-NGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 172

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD +PDR
Sbjct: 173 FVASSLADMY-------------------------------GKCGVLDDARKVFDYIPDR 201

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           +   +NA++ G  +NG  +  I L  EM K  +     + ++ LS   + G +E G+Q H
Sbjct: 202 NAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSH 261

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV-CDHISYNVMMDGLASVG 270
           ++   +G      +  +++  Y   G +  A  +F+   G +  D +++N+++ G    G
Sbjct: 262 AIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFD---GMIEKDVVTWNLLISGYVQQG 318

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            VEEA+   + M   +L+   +T  ++MSA       ++G ++    ++ G E+   +++
Sbjct: 319 LVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLAS 378

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
            A+ MY+ CG I  A  +F    +KD++ WNT++S YA   L   A+  + EMQ   + P
Sbjct: 379 TAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPP 438

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           +  T+                                N +I +  +N ++ +A ++F  M
Sbjct: 439 NVITW--------------------------------NLIILSLLRNGQVNEAKEMFLQM 466

Query: 448 SPR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
                  N+I+W T++NG + NG   + +    ++  S LRP+ +T++VALS+CA ++SL
Sbjct: 467 QSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASL 526

Query: 504 RHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N   S   S+  +++ +YAKCGD++ + RVF   +  +   +NA+ISA
Sbjct: 527 HFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISA 586

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA +G+ +EA++ +++++D G +KPD  T T++LS C++   V+    +F  MV+ +G  
Sbjct: 587 YALYGKVREAITLYRSLED-GGVKPDNITITSLLS-CNYGRDVNQAIEVFSDMVSKHGMK 644

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   M+DLL  AG  D+A R++     +  +    +LF +C+      L   ++  
Sbjct: 645 PCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKH 704

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E D    YV++SN YA  G W+E A +RE++K  G+ K+PGCSWI
Sbjct: 705 LLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 753



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 265/563 (47%), Gaps = 18/563 (3%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
           Y   ++   +NG     + L  EM   ++R     +  +L  C     L  G+Q+H+ + 
Sbjct: 2   YFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQIL 61

Query: 216 KSG--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           K G  ++    +   L+  Y  C  +  A  +F + +  V +  S+  ++     +G  E
Sbjct: 62  KKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLR--VRNVFSWAAIIGVKCRIGLGE 119

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            AL+ F +ML   + P      +V  AC      R G  VH    K+G      V+++  
Sbjct: 120 GALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLA 179

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY  CG +D+A  +F  + +++ V+WN ++  Y Q  +   AI    EM+  GI P   
Sbjct: 180 DMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRV 239

Query: 391 TFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  + L++S   G IE  +  HA   +NG+  +  +  ++++ Y K   I+ A  IF  M
Sbjct: 240 TVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGM 299

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             ++++TWN LI+G++  G   + +     +    L+ D  TLS  +S+     +L+ GK
Sbjct: 300 IEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGK 359

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           +I  Y +++ L S + L +  + +YAKCG +  + +VF+  ++KD I WN L+SAYA  G
Sbjct: 360 EIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSG 419

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
              EA+  F  MQ +  + P+  T+  ++ +    G V++   +F  M +  G  P    
Sbjct: 420 LSGEALRLFYEMQ-LESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GIFPNLIS 477

Query: 628 LSCMLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            + M++ L + G  +EA    R +    ++  +       SACA   +L  GR I G ++
Sbjct: 478 WTTMMNGLVQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYII 537

Query: 685 EREQD--KPSVYVLLSNIYAAAG 705
             +Q     S+   L ++YA  G
Sbjct: 538 RNQQYSFSASIETSLVDMYAKCG 560



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 161/659 (24%), Positives = 305/659 (46%), Gaps = 82/659 (12%)

Query: 28  LANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++ + + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 6   VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYG--EILQGCVYERDLCTGQQIHAQILKK 63

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + + +V FS+++  +V+SW   +    ++G  + A  
Sbjct: 64  GDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALM 123

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F +M                ENG                +  DN+   +V   C A   
Sbjct: 124 GFVEM---------------LENG----------------IFPDNFVVPNVCKACGALQW 152

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNV 261
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+    Y+ D   +++N 
Sbjct: 153 SRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFD----YIPDRNAVAWNA 208

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           +M G    G  EEA+    +M    + P+ +T  + +SA         G Q HA A+ +G
Sbjct: 209 LMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNG 268

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            E    +  + +  Y   G I+ A MIF  + EKD+V+WN +IS Y Q+ L   AI    
Sbjct: 269 LELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQ 328

Query: 379 EMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M+   ++ D  T  +L++   S+  +++ + I  +   +G+ ++I +++  +  YAK  
Sbjct: 329 LMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCG 388

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A ++F +   +++I WNTL++ +  +G   + L+ F E+ +  + P+  T ++ + 
Sbjct: 389 SIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIIL 448

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S  R   +   K++                                L++ +  I  + IS
Sbjct: 449 SLLRNGQVNEAKEMF-------------------------------LQMQSSGIFPNLIS 477

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +++   Q+G  +EA+   + MQ+  R++P+  T T  LSAC++   +  G  I   +
Sbjct: 478 WTTMMNGLVQNGCSEEAILFLRKMQE-SRLRPNAFTITVALSACANLASLHFGRSIHGYI 536

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           + +  +  +    + ++D+  + G +++AERV  S+ + +    + A+ SA A +G +R
Sbjct: 537 IRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSK-LCSELPLYNAMISAYALYGKVR 594



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/414 (22%), Positives = 179/414 (43%), Gaps = 60/414 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  ++A+++  Q+     LK D  +LST ++A  + +N   G ++  Y +
Sbjct: 308 NLLISGYVQQGLVEEAIYM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 366

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R GL++   +A+T + +Y     +V+ K+VF      D+  W T LSA            
Sbjct: 367 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 426

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 427 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLV 486

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + ++    LS C +   L FGR +H  + ++  +S   
Sbjct: 487 QNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSA 546

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDM 282
           S+  +L+ MY  CG++  A +VF      +C  +  YN M+   A  G+V EA+  +R +
Sbjct: 547 SIETSLVDMYAKCGDINKAERVFGSK---LCSELPLYNAMISAYALYGKVREAITLYRSL 603

Query: 283 LVASLRPSELTFVSVMSACLCPRVGY-------QVHAQAMKSGFEAYTSVSNAAITMYSS 335
               ++P  +T  S++S      V          V    MK   E Y       + + +S
Sbjct: 604 EDGGVKPDNITITSLLSCNYGRDVNQAIEVFSDMVSKHGMKPCLEHY----GLMVDLLAS 659

Query: 336 CGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            G+ D+A  +   +  K D     ++  + ++++  ++ ++ YL    +   PD
Sbjct: 660 AGETDKALRLMEEMPYKPDARMVQSLFESCSKQH--KTELVEYLSKHLLESEPD 711


>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Glycine max]
          Length = 770

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/722 (26%), Positives = 353/722 (48%), Gaps = 81/722 (11%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           + LN  ++ + R G+ + AL  +  +     + P   + +T  +AC +L +A  G + H 
Sbjct: 104 VSLNTLISTMVRCGYERQALDTYDSVMLDGVI-PSHITFATVFSACGSLLDADCGRRTHG 162

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
             ++ GL++  +V N +L +Y          RVF +I  P+  ++TT +    +   +  
Sbjct: 163 VVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKE 222

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A E                               LFR M +  +R D+ S +S+L VC  
Sbjct: 223 AAE-------------------------------LFRLMLRKGIRVDSVSLSSMLGVCAK 251

Query: 202 GLLEFG-----------RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           G  + G           +Q+H+L  K GF   + + N+L+ MY   G++  A KVF    
Sbjct: 252 GERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLN 311

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
            +    +S+N+M+ G  +    E+A    + M      P ++T++++++AC+        
Sbjct: 312 RHSV--VSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACV-------- 361

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
                                     G +     IF  +    + SWN ++S Y Q    
Sbjct: 362 ------------------------KSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADH 397

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
           R A+  + +MQ     PD  T   +L+S    GF+E  + +HA     G   ++ V+++L
Sbjct: 398 REAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSL 457

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I+ Y+K  +++ +  +F  +   +++ WN+++ GF +N      L  F ++      P E
Sbjct: 458 INVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSE 517

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           ++ +  +SSCA++SSL  G+Q H  ++K+  +  + +G+++I +Y KCGD++ +   F++
Sbjct: 518 FSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDV 577

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M  ++T++WN +I  YAQ+G+G  A+  +  M   G  KPD  T+ AVL+ACSH+ LVD+
Sbjct: 578 MPGRNTVTWNEMIHGYAQNGDGHNALCLYNDMISSGE-KPDDITYVAVLTACSHSALVDE 636

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G  IF++M+  YG +P   H +C++D L RAG  +E E ++++   +  +  W  + S+C
Sbjct: 637 GLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVWEVVLSSC 696

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             H NL L +  A  L   +    + YVLL+N+Y++ G W++A  +R+L+    V K PG
Sbjct: 697 RIHANLSLAKRAAEELYRLDPQNSASYVLLANMYSSLGKWDDAHVVRDLMSHNQVRKDPG 756

Query: 728 CS 729
            S
Sbjct: 757 YS 758



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/561 (28%), Positives = 271/561 (48%), Gaps = 50/561 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +HA   R  L +   ++N  + LY     + S   VF  I + +++SW   L+A  K
Sbjct: 25  GKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCK 84

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
             ++ YAC +F +MP R+    N +I+     GYE   +  +  +    V   + +FA+V
Sbjct: 85  ARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATV 144

Query: 196 LSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            S C + L  + GR+ H +V K G    + VVNAL+ MY  CG   DA +VF +      
Sbjct: 145 FSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEP-- 202

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--------CPRV 306
           + +++  MM GLA   +++EA   FR ML   +R   ++  S++  C         C  +
Sbjct: 203 NEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGI 262

Query: 307 -----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                G Q+H  ++K GFE    + N+ + MY+  G +D A  +F  L    +VSWN MI
Sbjct: 263 STNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMI 322

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNI 421
           + Y  R     A      MQS G  PD+ T                     +IN      
Sbjct: 323 AGYGNRCNSEKAAEYLQRMQSDGYEPDDVT---------------------YIN------ 355

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
                +++A  K+  ++   QIF  M   ++ +WN +++G+  N    + ++ F ++   
Sbjct: 356 -----MLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQ 410

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
              PD  TL+V LSSCA +  L  GK++H    K      + + +++I +Y+KCG ++ S
Sbjct: 411 CQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELS 470

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF+ + E D + WN++++ ++ +  G++A+S FK M+ +G   P + +F  V+S+C+ 
Sbjct: 471 KHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFF-PSEFSFATVVSSCAK 529

Query: 602 AGLVDDGTRIFDSMVNDYGFI 622
              +  G +    +V D GF+
Sbjct: 530 LSSLFQGQQFHAQIVKD-GFL 549



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 208/488 (42%), Gaps = 59/488 (12%)

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           +   L   +++  C+  +    G  VHA+  +    + T +SN  I +YS C  I  AC 
Sbjct: 3   KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62

Query: 345 IFARLQEKDIVSWNTMISTYAQ-RNLG------------------------------RSA 373
           +F  +  K+I SWN +++ Y + RNL                               R A
Sbjct: 63  VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQA 122

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISA 430
           +  Y  +   G+ P   TF ++ ++ G +   +     H  V   G+ +NI V NAL+  
Sbjct: 123 LDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCM 182

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK      A ++F ++   N +T+ T++ G        +  + F  +L   +R D  +L
Sbjct: 183 YAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSL 242

Query: 491 SVALSSCAR----------ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S  L  CA+          IS+   GKQ+H   +K      + L N+++ +YAK GD+D 
Sbjct: 243 SSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDS 302

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + +VF  +     +SWN +I+ Y      ++A    + MQ  G  +PD  T+  +L+AC 
Sbjct: 303 AEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDG-YEPDDVTYINMLTACV 361

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
            +G V  G +IFD M       P+    + +L    +     EA  +      Q +  + 
Sbjct: 362 KSGDVRTGRQIFDCMP-----CPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDR 416

Query: 661 WAL---FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL--LSNIYAAAGLWEEAANIRE 715
             L    S+CA  G L  G+ +     ++      VYV   L N+Y+  G  E + ++  
Sbjct: 417 TTLAVILSSCAELGFLEAGKEVHA-ASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFS 475

Query: 716 LLKRTGVI 723
            L    V+
Sbjct: 476 KLPELDVV 483


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 321/599 (53%), Gaps = 27/599 (4%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLD----VRRDNYSFASVLSVC----DAGL 203
           R+   +N+MI   ++NG+ +    L  EM + +       D  +  +VL VC    + GL
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G+ +H    K      + + NAL+ MY  CG + +A  +F+       + +S+N M+
Sbjct: 61  ---GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMV 115

Query: 264 DGLASVGRVEEALIRFRDMLVAS--LRPSELTFVSVMSACL----CPRVGYQVHAQAMKS 317
            G ++ G         R ML     ++  E+T ++ +  C      P +  ++H  ++K 
Sbjct: 116 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK-ELHCYSLKQ 174

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
            F     V+NA +  Y+ CG +  A  +F  ++ K + SWN +I  +AQ N  R ++ A+
Sbjct: 175 EFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAH 234

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
           L+M+  G+ PD FT  SLL++   ++ + +   +H F+  N +  ++ V  +++S Y   
Sbjct: 235 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 294

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +     +F  M  +++++WNT+I G+L NGFP + L  F ++++  ++    ++    
Sbjct: 295 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 354

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            +C+ + SLR G++ H Y LK+ L     +  ++I +YAK G +  S +VFN + EK T 
Sbjct: 355 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWNA+I  Y  HG  KEA+  F+ MQ  G   PD  TF  VL+AC+H+GL+ +G R  D 
Sbjct: 415 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLRYLDQ 473

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHGN 672
           M + +G  P   H +C++D+LGRAG LD+A RV+ ++ +   +D   W +L S+C  H N
Sbjct: 474 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV-AEEMSEEADVGIWKSLLSSCRIHQN 532

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L +G  +A  L E E +KP  YVLLSN+YA  G WE+   +R+ +    + K  GCSWI
Sbjct: 533 LEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 591



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 236/529 (44%), Gaps = 55/529 (10%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD+ +L T L  CA  R    G  +H +A++  L     + N ++ +Y     + + + +
Sbjct: 40  PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 99

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F    N +V SW T +   +  G        FD        V   M+ G           
Sbjct: 100 FKMNNNKNVVSWNTMVGGFSAEGDTH---GTFD--------VLRQMLAGGE--------- 139

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
                    DV+ D  +  + + VC     L   ++LH    K  F     V NA +  Y
Sbjct: 140 ---------DVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 190

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             CG++  A +VF   +    +  S+N ++ G A       +L     M ++ L P   T
Sbjct: 191 AKCGSLSYAQRVFHGIRSKTVN--SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 248

Query: 294 FVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             S++SAC      R+G +VH   +++  E    V  + +++Y  CG++     +F  ++
Sbjct: 249 VCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAME 308

Query: 351 EKDIVSWNTMISTYAQ-----RNLG--RSAILAYLEMQSVGIRPDEFTFG--SLLASSGF 401
           +K +VSWNT+I+ Y Q     R LG  R  +L  +++  + + P    FG  SLL S   
Sbjct: 309 DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP---VFGACSLLPS--- 362

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           + +    HA+   + +  +  ++ +LI  YAKN  I Q+ ++F+ +  ++  +WN +I G
Sbjct: 363 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 422

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           + ++G   + ++ F E+  +   PD+ T    L++C   S L H    +   +K++   K
Sbjct: 423 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH-SGLIHEGLRYLDQMKSSFGLK 481

Query: 522 MSLGN--AMITLYAKCGDLDCSLRVF--NMMIEKDTISWNALISAYAQH 566
            +L +   +I +  + G LD +LRV    M  E D   W +L+S+   H
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 530



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 183/380 (48%), Gaps = 18/380 (4%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           F+++  K G + YA  VF  +  + +  +NA+I G  ++    + +    +M    +  D
Sbjct: 186 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 245

Query: 189 NYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           +++  S+LS C     L  G+++H  + ++     + V  +++++Y +CG +     +F+
Sbjct: 246 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 305

Query: 248 --EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCP 304
             E K  V    S+N ++ G    G  + AL  FR M++  ++   ++ + V  AC L P
Sbjct: 306 AMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361

Query: 305 --RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+G + HA A+K   E    ++ + I MY+  G I ++  +F  L+EK   SWN MI 
Sbjct: 362 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 421

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGII 418
            Y    L + AI  + EMQ  G  PD+ TF  +L +   SG I E +  +       G+ 
Sbjct: 422 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 481

Query: 419 TNIQVSNALISAYAKNERIKQAYQIF-HNMSPR-NIITWNTLINGFLLNGFPVQGLQHFS 476
            N++    +I    +  ++ +A ++    MS   ++  W +L++   ++     G +  +
Sbjct: 482 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 541

Query: 477 ELLMSELRPDEYTLSVALSS 496
           +L   EL P++    V LS+
Sbjct: 542 KLF--ELEPEKPENYVLLSN 559



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 111/472 (23%), Positives = 200/472 (42%), Gaps = 83/472 (17%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD +++ + L+AC+ L++   G ++H + +R  L+    V  ++LSLY +  +L +V+
Sbjct: 242 LLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQ 301

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            +F  +++  + SW T                               +ITG  +NG+ D 
Sbjct: 302 ALFDAMEDKSLVSWNT-------------------------------VITGYLQNGFPDR 330

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +G+FR+M    ++    S   V   C     L  GR+ H+   K        +  +LI 
Sbjct: 331 ALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLID 390

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G++  + KVF   K       S+N M+ G    G  +EA+  F +M      P +
Sbjct: 391 MYAKNGSITQSSKVFNGLKEK--STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDD 448

Query: 292 LTFVSVMSACLCPRVGYQ--VHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFA 347
           LTF+ V++AC    + ++   +   MKS F    ++ + A  I M    G++D+A  + A
Sbjct: 449 LTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVA 508

Query: 348 RL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
               +E D+  W +++S+          I   LEM            G  +A+  F    
Sbjct: 509 EEMSEEADVGIWKSLLSS--------CRIHQNLEM------------GEKVAAKLFELEP 548

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR----------NIITW 455
           E    +V ++           L +   K E +++  Q  + MS R          N   +
Sbjct: 549 EKPENYVLLSN----------LYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVF 598

Query: 456 NTLINGFLLNGF-PVQGLQHFSELLMSEL--RPDEYTLSVALSSCARISSLR 504
           + ++    L+GF  ++ L    E+ +S++  RPD  ++   LS   +I  LR
Sbjct: 599 SFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLR 650


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 207/677 (30%), Positives = 333/677 (49%), Gaps = 44/677 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L AC   ++     ++H + L+    A   V + +  LY +   +V  +R+F EI NP V
Sbjct: 15  LEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
             W                               N +I     NG  D  I L+  M  L
Sbjct: 75  ILW-------------------------------NQIIRAYAWNGPFDGAIDLYHSMLHL 103

Query: 184 DVRRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            VR + Y++  VL  C +GLL  E G ++HS     G    V V  AL+  Y  CG +V+
Sbjct: 104 GVRPNKYTYPFVLKAC-SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A ++F        D +++N M+ G +  G  ++A+     M    + P+  T V V+   
Sbjct: 163 AQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTV 220

Query: 302 LCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              +    G  +H   ++  F+    V    + MY+ C  +  A  IF  +  ++ VSW+
Sbjct: 221 GEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWS 280

Query: 359 TMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFI 414
            MI  Y   +  + A+  + +M     + P   T GS+L +   +  +     +H ++  
Sbjct: 281 AMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIK 340

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G + +I + N L+S YAK   I  A + F  M+P++ ++++ +++G + NG     L  
Sbjct: 341 LGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSI 400

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  + +S + PD  T+   L +C+ +++L+HG   HGY++     +   + NA+I +Y+K
Sbjct: 401 FRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSK 460

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG +  +  VFN M   D +SWNA+I  Y  HG G EA+  F  +  +G +KPD  TF  
Sbjct: 461 CGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG-LKPDDITFIC 519

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           +LS+CSH+GLV +G   FD+M  D+  +P  +H  CM+D+LGRAG +DEA   I +   +
Sbjct: 520 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 579

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
                W AL SAC  H N+ LG  ++  +     +    +VLLSNIY+AAG W++AA+IR
Sbjct: 580 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 639

Query: 715 ELLKRTGVIKQPGCSWI 731
              K  G+ K PGCSWI
Sbjct: 640 ITQKDWGLKKIPGCSWI 656



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 149/585 (25%), Positives = 265/585 (45%), Gaps = 53/585 (9%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y   LHL V        +P+ Y+    L AC+ L     G ++H++A   GL++   V  
Sbjct: 97  YHSMLHLGV--------RPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++  Y     LV  +R+FS + + DV +W   ++ C+  G  D A ++  +M +  +  
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICP 208

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTK 216
            ++ I G                                 +V +A  L  G+ LH    +
Sbjct: 209 NSSTIVGVLP------------------------------TVGEAKALGHGKALHGYCVR 238

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
             F   V V   L+ MY  C  ++ A K+F+     V + +S++ M+ G  +   ++EAL
Sbjct: 239 RSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMG--VRNEVSWSAMIGGYVASDCMKEAL 296

Query: 277 IRFRDMLVA-SLRPSELTFVSVMSACL----CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
             F  M++  ++ P+ +T  SV+ AC       R G ++H   +K G      + N  ++
Sbjct: 297 ELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSR-GRKLHCYIIKLGSVLDILLGNTLLS 355

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG ID+A   F  +  KD VS++ ++S   Q      A+  +  MQ  GI PD  T
Sbjct: 356 MYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
              +L +   +  ++     H ++ + G  T+  + NALI  Y+K  +I  A ++F+ M 
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 475

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
             +I++WN +I G+ ++G  ++ L  F +LL   L+PD+ T    LSSC+    +  G+ 
Sbjct: 476 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 535

Query: 509 IHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQH 566
               + ++ +++ +M     M+ +  + G +D +   + NM  E D   W+AL+SA   H
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
              +      K +Q +G        F  + +  S AG  DD   I
Sbjct: 596 KNIELGEEVSKKIQSLG--PESTGNFVLLSNIYSAAGRWDDAAHI 638


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 204/709 (28%), Positives = 362/709 (51%), Gaps = 78/709 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   +++ PD + +     AC  L+ + FG  +H Y ++AGL+   
Sbjct: 130 RIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCV 188

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y     L   ++VF EI                               P+R
Sbjct: 189 FVASSLADMYGKCGVLDDARKVFDEI-------------------------------PER 217

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLH 211
           ++  +NA++ G  +NG  +  I LF +M K  V     + ++ LS     + +E G+Q H
Sbjct: 218 NVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSH 277

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  +L+  Y   G +  A  VF+  + +  D +++N+++ G    G 
Sbjct: 278 AIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFD--RMFDKDVVTWNLLISGYVQQGL 335

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNA 328
           VE+A+   + M +  L+   +T  ++MSA       + G +V    ++   +    +++ 
Sbjct: 336 VEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLAST 395

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG I +A  +F    EKD++ WNT+++ YAQ  L   A+  + EMQ   + P+
Sbjct: 396 TMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPN 455

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM- 447
             T+                                N +I +  +N  + +A ++F  M 
Sbjct: 456 VITW--------------------------------NLIILSLLRNGEVNEAKEMFLQMQ 483

Query: 448 ----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
               SP N+I+W T++NG + NG   + +    ++  S LRP+ ++++VALS+ A ++SL
Sbjct: 484 SSGISP-NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASL 542

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N    S +S+  +++ +YAKCGD++ + RVF   +  +   +NA+ISA
Sbjct: 543 HFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISA 602

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA +G  KEA++ +++++D+G IKPD  TFT++LSAC+HAG +D    +F +MV  +G  
Sbjct: 603 YALYGNVKEAIALYRSLEDMG-IKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMT 661

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   M+DLL  AG  ++A R+I     +  +    +L ++C       L   ++  
Sbjct: 662 PCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRH 721

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E +    YV +SN YA  G W+E   +RE++K  G+ K+PGCSWI
Sbjct: 722 LLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWI 770



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 153/574 (26%), Positives = 279/574 (48%), Gaps = 24/574 (4%)

Query: 151 DRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LE 205
           D+ LP     Y   ++   +NG     + L  EM   + R     +   L  C     L 
Sbjct: 8   DQALPPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLS 67

Query: 206 FGRQLHSLVTKSG--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            G+Q+H+ + K+G  ++    +   L+  Y  C  +  A  +F + +  V +  S+  ++
Sbjct: 68  TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLR--VRNVFSWAAII 125

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
                +G  E AL+ F +ML   + P      +V  AC      R G  VH   +K+G E
Sbjct: 126 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLE 185

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+++   MY  CG +D+A  +F  + E+++V+WN ++  Y Q  +   AI  + +M
Sbjct: 186 DCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDM 245

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+ P   T  + L++S  +  VE     HA   +NG+  +  +  +L++ Y K   I
Sbjct: 246 RKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLI 305

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSS 496
           + A  +F  M  ++++TWN LI+G++  G  V+   + S+L+ + +L+ D  TLS  +S+
Sbjct: 306 EYAEMVFDRMFDKDVVTWNLLISGYVQQGL-VEDAIYMSQLMRLEKLKYDCVTLSTLMSA 364

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            AR  +L+ GK++  Y ++++L + + L +  + +YAKCG +  + +VF+  +EKD I W
Sbjct: 365 AARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILW 424

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N L++AYAQ G   EA+  F  MQ +  + P+  T+  ++ +    G V++   +F  M 
Sbjct: 425 NTLLAAYAQSGLSGEALRLFYEMQ-LESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQ 483

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN---L 673
           +  G  P     + M++ + + G  +EA   +          N +++  A +A  N   L
Sbjct: 484 SS-GISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASL 542

Query: 674 RLGRIIAGLLLE--REQDKPSVYVLLSNIYAAAG 705
             GR I G ++   R     S+   L ++YA  G
Sbjct: 543 HFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCG 576



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 155/657 (23%), Positives = 302/657 (45%), Gaps = 78/657 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+IY     L  C   R+ + G Q+HA  L+ 
Sbjct: 22  VSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYG--EXLQGCVYERDLSTGKQIHARILKN 79

Query: 87  G--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G       ++   ++  Y     L   + +FS+++  +V+SW   +    ++G     CE
Sbjct: 80  GDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIG----LCE 135

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                           + G             F EM + ++  DN+   +V   C A   
Sbjct: 136 --------------GALMG-------------FVEMLENEIFPDNFVVPNVCKACGALQW 168

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+E      + +++N +M
Sbjct: 169 SRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER--NVVAWNALM 226

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G    G  EEA+  F DM    + P+ +T  + +SA    +    G Q HA A+ +G E
Sbjct: 227 VGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLE 286

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G I+ A M+F R+ +KD+V+WN +IS Y Q+ L   AI     M
Sbjct: 287 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLM 346

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   ++ D  T  +L++++   E ++    +  +   + + T+I +++  +  YAK   I
Sbjct: 347 RLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSI 406

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F +   +++I WNTL+  +  +G   + L+ F E+ +  + P+  T ++ + S 
Sbjct: 407 VDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSL 466

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R   +   K++                                L++ +  I  + ISW 
Sbjct: 467 LRNGEVNEAKEMF-------------------------------LQMQSSGISPNLISWT 495

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +++   Q+G  +EA+   + MQ+ G ++P+  + T  LSA ++   +  G  I   ++ 
Sbjct: 496 TMMNGMVQNGCSEEAILFLRKMQESG-LRPNAFSITVALSASANLASLHFGRSIHGYIIR 554

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           +     +    + ++D+  + G +++AERV  S+ + +    + A+ SA A +GN++
Sbjct: 555 NLRHSSSVSIETSLVDMYAKCGDINKAERVFGSK-LYSELPLYNAMISAYALYGNVK 610



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 141/318 (44%), Gaps = 44/318 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+++  Q+    KLK D  +LST ++A A   N  FG ++  Y +
Sbjct: 324 NLLISGYVQQGLVEDAIYM-SQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCI 382

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R  L     +A+T + +Y     +V  K+VF      D+  W T L+A            
Sbjct: 383 RHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEALR 442

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 443 LFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMV 502

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + +S    LS   +   L FGR +H  + ++   S  V
Sbjct: 503 QNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSV 562

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A +VF        +   YN M+   A  G V+EA+  +R + 
Sbjct: 563 SIETSLVDMYAKCGDINKAERVF--GSKLYSELPLYNAMISAYALYGNVKEAIALYRSLE 620

Query: 284 VASLRPSELTFVSVMSAC 301
              ++P  +TF S++SAC
Sbjct: 621 DMGIKPDSVTFTSLLSAC 638


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/631 (30%), Positives = 345/631 (54%), Gaps = 23/631 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVD--YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           +P ++   T L+A  ++G  D   A  + D+MP R+   +N +I   +  G  +  +  F
Sbjct: 42  SPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETF 101

Query: 178 REMHKL-DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
              H+  +V+ D +++A+ L+ C  AG L+ G+ +H+L    G +  V V N+L++MY  
Sbjct: 102 LHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYAR 161

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG++ +A +VF+  +    D +S+N ++ G   VG  EE L  F  M   ++  +     
Sbjct: 162 CGDMGEARRVFDVTEER--DDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALG 219

Query: 296 SVMSACL-----CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           SV+  C         +   VH   +K+G +    +++A + MY+  G + EA  +F  + 
Sbjct: 220 SVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVL 279

Query: 351 EKDIVSWNTMISTYAQ------RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGF 401
           + ++V +N MI+   +      + + R A+  Y E+QS G+ P EFTF S++ +   +G 
Sbjct: 280 DPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGD 339

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE  + IH  V  +    +  + +ALI  Y  +  ++  ++ F ++  ++++TW  +I+G
Sbjct: 340 IEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISG 399

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            + N    + L  F ELL   L+PD +T+S  +++CA ++ +R G+Q+  +  K+     
Sbjct: 400 CVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRF 459

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
            ++GN+ I +YA+ G+++ +++ F  M   D +SW+A+IS++AQHG  ++A+  F  M  
Sbjct: 460 TAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEM-- 517

Query: 582 VG-RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           VG ++ P++ TF  VL+ACSH GLVD+G R ++ M  +YG  P   H +C++DLLGRAG 
Sbjct: 518 VGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGR 577

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L +AE  I           W +L  +C  H ++  G+++A  ++E +      YV L N+
Sbjct: 578 LADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNM 637

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y  AG     + IR+L+K  GV K+PG SWI
Sbjct: 638 YLDAGELSLGSKIRDLMKERGVKKEPGLSWI 668



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/583 (23%), Positives = 271/583 (46%), Gaps = 62/583 (10%)

Query: 11  AGNSNTSKELL--------LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AG+++ ++ LL        +  N+ +   SR+G  +++L  F+  H + ++K D ++ + 
Sbjct: 60  AGDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAA 119

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            LAAC+       G  +HA A+  GL     V+N+++S+Y    D+   +RVF   +  D
Sbjct: 120 ALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERD 179

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
             SW + +S   ++G  +    VF            A++  C         +GL      
Sbjct: 180 DVSWNSLVSGYLRVGAHEEMLRVF------------ALMRRCA--------MGL------ 213

Query: 183 LDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                ++++  SV+  C   D  +      +H  V K+G    + + +A++ MY   G +
Sbjct: 214 -----NSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGAL 268

Query: 240 VDACKVFEEAKGYVCDH--ISYNVMMDGL----ASVGR--VEEALIRFRDMLVASLRPSE 291
            +A  +F+     V D   + +N M+ GL    A+V +  V EAL  + ++    + P+E
Sbjct: 269 SEAVALFKS----VLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTE 324

Query: 292 LTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF SV+ AC        G Q+H Q +K  F+    + +A I +Y +   +++    F  
Sbjct: 325 FTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRS 384

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           + ++D+V+W  MIS   Q  L   A+  + E+  VG++PD FT  S++   AS   +   
Sbjct: 385 VPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTG 444

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +  F   +G      + N+ I  YA++  ++ A Q F  M   ++++W+ +I+    +
Sbjct: 445 EQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQH 504

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV-LKNNLISKMSL 524
           G   Q LQ F+E++ +++ P+E T    L++C+    +  G + +  + ++  L   +  
Sbjct: 505 GCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKH 564

Query: 525 GNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
              ++ L  + G L D    + + +   + + W +L+ +   H
Sbjct: 565 CTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIH 607


>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 652

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/599 (32%), Positives = 320/599 (53%), Gaps = 15/599 (2%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
           +FD+MP RD   +N MI+G T  G  +    LF +M +     D YSF+ +L  +  A  
Sbjct: 3   LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G Q+H LV K G+ C V V ++L+ MY  C  V DA   F E      + +S+N ++
Sbjct: 63  FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEI--LEPNSVSWNALI 120

Query: 264 DGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
            G   V   + A      M + A++   + TF  +++    P    +  QVHA+ +K G 
Sbjct: 121 AGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGL 180

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYL 378
           E   ++ NA I+ Y++CG + +A  +F  L   KD++SWN+MI+  ++     SA   + 
Sbjct: 181 EHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFT 240

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAK-- 433
           EM    I  D +T+  ++++    E     + +H  V   G+     VSNALIS Y +  
Sbjct: 241 EMHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +K A  +F ++ P+++++WN+++ GF  NG     ++ F  L  S +  D+Y  S  
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK-D 552
           L SC+ +++L+ G+Q H    K++  S   + +++I +Y+KCG ++ + + F  +  K +
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHN 420

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
           TI+WNA+I  YAQHG G+ ++  F  M +   +K D  TFTA+L+ACSH GL+ +G  + 
Sbjct: 421 TIAWNAMILGYAQHGSGQVSLDLFSQMCN-QNVKLDHVTFTAILTACSHTGLIQEGLELL 479

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +SM   Y   P  +H +  +DLLGRAG +++ + +I S  +             C A G 
Sbjct: 480 NSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGE 539

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +   +A  LLE E +    YV LS++Y+    WEE AN+++++K  GV K PG SWI
Sbjct: 540 IEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWI 598



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 189/386 (48%), Gaps = 46/386 (11%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI-QNPDVYSWTTFLSACTKM 136
           Q+HA  L+ GL+    + N ++S Y N   +   KRVF  +  + D+ SW          
Sbjct: 170 QVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISW---------- 219

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                N+MI G +++  ++    LF EMH+  +  D Y++  ++
Sbjct: 220 ---------------------NSMIAGLSKHEQKESAFELFTEMHRNWIETDIYTYTGIV 258

Query: 197 SVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMY--FNCGNVVDACKVFEEAKGYV 253
           S C     + FG+ LH LV K G   + SV NALI+MY  F  G + DA  +FE  K   
Sbjct: 259 SACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPK- 317

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQV 310
            D +S+N +M G +  G  E+A+  FR +  +++   +  F +V+ +C      ++G Q 
Sbjct: 318 -DLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQT 376

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNL 369
           HA A KS FE+   V+++ I MYS CG I+ A   F ++  K + ++WN MI  YAQ   
Sbjct: 377 HALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGS 436

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSN 425
           G+ ++  + +M +  ++ D  TF ++L +   +G I E +E++++   +  I   ++   
Sbjct: 437 GQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNSMEPVYKIQPRMEHYA 496

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRN 451
           A +    +   + +  ++  +M P N
Sbjct: 497 AAVDLLGRAGLVNKVKELIESM-PLN 521



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 151/299 (50%), Gaps = 37/299 (12%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           +R+   + G+ +     L+  N  +A LS+    + A  LF ++H +  ++ DIY+ +  
Sbjct: 204 KRVFDGLGGSKD-----LISWNSMIAGLSKHEQKESAFELFTEMHRNW-IETDIYTYTGI 257

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           ++AC+   + +FG  LH   ++ GL+    V+N ++S+Y               IQ P  
Sbjct: 258 VSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMY---------------IQFP-- 300

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                        G +  A  +F+ +  +DL  +N+++TG ++NG  +  +  FR +   
Sbjct: 301 ------------TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSS 348

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           ++  D+Y+F++VL  C D   L+ G+Q H+L TKS F     V ++LI MY  CG + +A
Sbjct: 349 NIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENA 408

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            K FE+      + I++N M+ G A  G  + +L  F  M   +++   +TF ++++AC
Sbjct: 409 RKCFEQISSK-HNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTAC 466


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/543 (35%), Positives = 291/543 (53%), Gaps = 21/543 (3%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNV 261
           L  G QLH  +TK GF     + N LI MY  CG +  AC+VF    G + D   +S+  
Sbjct: 20  LRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVF----GGMRDRNVVSWTA 75

Query: 262 MMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PRVGYQVHAQAMKS 317
           +M G    G     L    +M  AS   P+E T  + + AC        G  +H   +++
Sbjct: 76  LMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRA 135

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           G++ +  V+++ + +YS  G+I +A  +F  A L    I +WN M+S YA    GR A+L
Sbjct: 136 GYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLG-SGIATWNAMVSGYAHAGHGRDALL 194

Query: 376 AYLEMQ--SVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIIT--NIQVSNALI 428
            + EM+      +PDEFTF SLL A SG     E   +HA +  +G  T  N  ++ AL+
Sbjct: 195 VFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALV 254

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K  R+  A Q+F  +  +N+I W  ++ G    G   + L+ F     S  RPD +
Sbjct: 255 DMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSH 314

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
            LS  +   A  + +  G+Q+H Y +K+   + +S GN+++ +Y KCG  D + R+F  M
Sbjct: 315 VLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREM 374

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              + +SW  +++   +HG G+EAV+ F+ M+  G ++PD+ T+ A+LSACSHAGLVD+ 
Sbjct: 375 RAPNVVSWTTMVNGLGKHGLGREAVALFEEMR-AGGVEPDEVTYLALLSACSHAGLVDEC 433

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            R F  +  D    P  +H +CM+DLLGRAG L EA  +I +  ++     W  L SAC 
Sbjct: 434 RRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACR 493

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H ++ +GR    +LL  + D P  YV LSN+ A AG W E   +R+ ++R G+ KQ GC
Sbjct: 494 VHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGC 553

Query: 729 SWI 731
           SW+
Sbjct: 554 SWV 556



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 18/462 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSF- 192
           K G +D ACEVF  M DR++  + A++ G   +G     + L  EM    +   + Y+  
Sbjct: 51  KCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLS 110

Query: 193 ASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           AS+ + C  G    G  +H L  ++G+     V ++L+ +Y   G + DA +VF+ A G 
Sbjct: 111 ASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA-GL 169

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVG 307
                ++N M+ G A  G   +AL+ FR+M       +P E TF S++ AC      R G
Sbjct: 170 GSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREG 229

Query: 308 YQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            QVHA    SGF   ++  ++ A + MY  C ++  A  +F RL+ K+++ W  ++  +A
Sbjct: 230 AQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHA 289

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGIITNIQ 422
           Q      A+  +      G RPD     S   +LA    +E    +H +   +   T++ 
Sbjct: 290 QEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVS 349

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
             N+++  Y K     +A ++F  M   N+++W T++NG   +G   + +  F E+    
Sbjct: 350 AGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGG 409

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCS 541
           + PDE T    LS+C+    +   ++    + ++  +   +   A M+ L  + G+L  +
Sbjct: 410 VEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREA 469

Query: 542 LRVFNMMIEKDTIS-WNALISAYAQHGE---GKEAVSCFKAM 579
             +   M  + T+  W  L+SA   H +   G+EA     AM
Sbjct: 470 RDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM 511



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 179/383 (46%), Gaps = 42/383 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G     L L  ++ ++ +  P+ Y+LS +L AC  + + A G  +H   +RAG + + 
Sbjct: 82  RHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHD 141

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            VA++++ +Y     +   +RVF        + +W                         
Sbjct: 142 VVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATW------------------------- 176

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREM--HKLDVRRDNYSFASVLSVCDA-GLLEFGR 208
                 NAM++G    G+    + +FREM  H+   + D ++FAS+L  C   G    G 
Sbjct: 177 ------NAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGA 230

Query: 209 QLHSLVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           Q+H+ +T SGFS   + +   AL+ MY  C  +  A +VFE  +    + I +  ++ G 
Sbjct: 231 QVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERK--NVIQWTAVVVGH 288

Query: 267 ASVGRVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
           A  G+V EAL  FR    +  RP      + V V++       G QVH   +K       
Sbjct: 289 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDV 348

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S  N+ + MY  CG  DEA  +F  ++  ++VSW TM++   +  LGR A+  + EM++ 
Sbjct: 349 SAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 408

Query: 384 GIRPDEFTFGSLLASSGFIEMVE 406
           G+ PDE T+ +LL++     +V+
Sbjct: 409 GVEPDEVTYLALLSACSHAGLVD 431



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 2/214 (0%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + AR SSLR G Q+HG + K    S   LGN +I +Y KCG+LD +  VF  M +++ 
Sbjct: 11  LRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRNV 70

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW AL+  + +HG+    +     M+      P++ T +A L AC   G    G  I  
Sbjct: 71  VSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHG 130

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
             V   G+   +   S ++ +  + G + +A RV +   + +    W A+ S  A  G+ 
Sbjct: 131 LCVR-AGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHG 189

Query: 674 RLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAGL 706
           R   ++   +   E Q +P  +   S + A +GL
Sbjct: 190 RDALLVFREMRRHEGQHQPDEFTFASLLKACSGL 223



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 115/299 (38%), Gaps = 68/299 (22%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   +       ++ +++    +   ++ G   +AL LF +   S   +PD + LS+ 
Sbjct: 261 RRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS-GARPDSHVLSSV 319

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           +   A+      G Q+H Y ++          N+I+ +Y         +R+F E++ P+V
Sbjct: 320 VGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNV 379

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SWTT                               M+ G  ++G     + LF EM   
Sbjct: 380 VSWTT-------------------------------MVNGLGKHGLGREAVALFEEMRAG 408

Query: 184 DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V  D  ++ ++LS C  AGL++  R+                       YF+C  +   
Sbjct: 409 GVEPDEVTYLALLSACSHAGLVDECRR-----------------------YFSC--IRRD 443

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             V  +A+ Y C       M+D L   G + EA    R M    + P+   + +++SAC
Sbjct: 444 RTVRPKAEHYAC-------MVDLLGRAGELREARDLIRTM---PMEPTVGVWQTLLSAC 492


>gi|357516795|ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355522708|gb|AET03162.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 699

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 202/630 (32%), Positives = 324/630 (51%), Gaps = 44/630 (6%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+Y+    ++A +K   +  A ++FDKMP RD   +NA+I+G       D    L   M 
Sbjct: 33  DLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMR 92

Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 DN++F S L  V  A  LE G+QLHS++ K   +  V   +AL+ MY  CG V 
Sbjct: 93  VSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVD 152

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA  VF       C+++S+N ++ G + VG +        DM    +R  EL  V +   
Sbjct: 153 DALVVFRYMPE--CNYVSWNTLIAGYSRVGDL--------DMAFWLMRCQELEGVGIDDG 202

Query: 301 CLCPRVGY-----------QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA-- 347
            + P +             Q+H + +K G EA+  V NA IT YS C  + +A  +F   
Sbjct: 203 TVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGA 262

Query: 348 -RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV- 405
             +  +D+V+WN+M++ Y        A   ++EMQS G  PD++++  +++     E   
Sbjct: 263 VTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKS 322

Query: 406 --EMIHAFVFINGIITNIQVSNALISAYA--KNERIKQAYQIFHNMSPRNIITWNTLING 461
             E +H  V   G   ++ VSNALI+ Y    N  ++ A +IF +M  ++  TWN+++ G
Sbjct: 323 RGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAG 382

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           ++  G     L+ F ++    +  D+YT S  +  C+ +++L+ G+Q+H   LK    + 
Sbjct: 383 YVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTN 442

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             +G        KC         F      + I WN++I  YAQHG+G  A+  F  M++
Sbjct: 443 KYVGKDA----KKC---------FETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMRE 489

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
             ++KPD  TF AVL+ACSH GLV++G +I  SM +D+G     +H +C +DL GRAGYL
Sbjct: 490 -KKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYL 548

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
           +E + ++ +   +  +     L  AC + GN+ L   +A +LL  E +  S YVLLS++Y
Sbjct: 549 EEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLY 608

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
               +W+E A++  L++  GV K PG SWI
Sbjct: 609 GRLKMWDEKASVTRLMRERGVKKVPGWSWI 638



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 211/425 (49%), Gaps = 26/425 (6%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L + +  H L  KSG    +   N LIT Y  C  +  A ++F++      D +S+N ++
Sbjct: 15  LPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQR--DTVSWNAVI 72

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G  +   ++        M V+       TF S +      +   +G Q+H+  +K    
Sbjct: 73  SGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLN 132

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL-- 378
                 +A + MY+ CG++D+A ++F  + E + VSWNT+I+ Y++  +G   +  +L  
Sbjct: 133 ENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSR--VGDLDMAFWLMR 190

Query: 379 --EMQSVGIRPDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
             E++ VGI  D+ T     +LL    F  +V  +H  +  +G+     V NA+I+AY++
Sbjct: 191 CQELEGVGI--DDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSE 248

Query: 434 NERIKQAYQIF---HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
              ++ A ++F     ++ R+++TWN+++  +LL+         F E+      PD+Y+ 
Sbjct: 249 CCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSY 308

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA----KCGDLDCSLRVFN 546
           +  +S C+       G+ +HG V+K      + + NA+I +Y     +C  ++ +LR+F 
Sbjct: 309 TGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFF 366

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  KD  +WN++++ Y Q G  ++A+  F  ++ +  ++ D  TF+AV+  CS    + 
Sbjct: 367 SMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSL-FVEIDDYTFSAVIRCCSDLATLQ 425

Query: 607 DGTRI 611
            G ++
Sbjct: 426 LGQQV 430



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 140/606 (23%), Positives = 243/606 (40%), Gaps = 98/606 (16%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++  +TL   A  +    G QLH+  ++  L                           
Sbjct: 99  DNHTFGSTLKGVARAQRLELGQQLHSVMIKMRL--------------------------- 131

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
               N +V+S +  L    K G VD A  VF  MP+ +   +N +I G +  G  D+   
Sbjct: 132 ----NENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFW 187

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           L R      V  D+ + + +L++ D         QLH  + K G      V NA+IT Y 
Sbjct: 188 LMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYS 247

Query: 235 NCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            C ++ DA +VF  A    C D +++N M+       +   A   F +M      P + +
Sbjct: 248 ECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYS 307

Query: 294 FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMY----SSCGKIDEACMIF 346
           +  V+S C        G  +H   +K G E    VSNA I MY    + C  +++A  IF
Sbjct: 308 YTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIF 365

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             +  KD  +WN++++ Y Q      A+  +++++S+ +  D++TF +++   +    ++
Sbjct: 366 FSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQ 425

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           + + +H      G  TN  V              K A + F   S  N I WN++I G+ 
Sbjct: 426 LGQQVHVLSLKVGFDTNKYVG-------------KDAKKCFETTSNDNAIIWNSIIFGYA 472

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            +G     L+ F  +   +++PD  T    L++C+    +  G++I         I  M 
Sbjct: 473 QHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKI---------IQSME 523

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
                        D    LR+ +         +   +  Y + G  +E     KA+ +  
Sbjct: 524 ------------SDFGIPLRMEH---------YACAVDLYGRAGYLEEG----KALVETM 558

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML--DLLGRAGYL 641
             +PD      +L AC   G ++  + +   ++     +  EDH + +L  DL GR    
Sbjct: 559 PFEPDAMVLRTLLGACRSCGNIELASHVAKMLL----VLEPEDHSTYVLLSDLYGRLKMW 614

Query: 642 DEAERV 647
           DE   V
Sbjct: 615 DEKASV 620



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 164/388 (42%), Gaps = 50/388 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  SR G    A  L ++      +  D  ++S  L     +R  +   QLH   +
Sbjct: 170 NTLIAGYSRVGDLDMAFWL-MRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIV 228

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+A+  V N I++ Y     L   +RVF                    +G V   C 
Sbjct: 229 KHGLEAFNIVCNAIITAYSECCSLQDAERVF--------------------VGAVTVTC- 267

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                  RDL  +N+M+     +  E++   +F EM       D+YS+  V+S C     
Sbjct: 268 -------RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEH 320

Query: 205 EF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGN--VVDACKVFEEAKGYVCDHISYNV 261
           +  G  LH LV K G    V V NALI MY    N  + DA ++F      V D  ++N 
Sbjct: 321 KSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMD--VKDCCTWNS 378

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++ G   VGR E+AL  F  +    +   + TF +V+  C      ++G QVH  ++K G
Sbjct: 379 VLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVG 438

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F+    V           GK  + C  F      + + WN++I  YAQ   G  A+  + 
Sbjct: 439 FDTNKYV-----------GKDAKKC--FETTSNDNAIIWNSIIFGYAQHGQGNIALELFY 485

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            M+   ++PD  TF ++L +     +VE
Sbjct: 486 LMREKKVKPDHITFVAVLTACSHNGLVE 513



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 8/208 (3%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           ++  H     +G I+++  SN LI+AY+K  ++  A Q+F  M  R+ ++WN +I+G++ 
Sbjct: 18  LQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVN 77

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
                   Q  + + +S    D +T    L   AR   L  G+Q+H  ++K  L   +  
Sbjct: 78  TADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFS 137

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           G+A++ +YAKCG +D +L VF  M E + +SWN LI+ Y++ G+   A    +  Q++  
Sbjct: 138 GSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRC-QELEG 196

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIF 612
           +  D  T + +L+         DG R +
Sbjct: 197 VGIDDGTVSPLLTLL-------DGVRFY 217



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 82/365 (22%), Positives = 161/365 (44%), Gaps = 55/365 (15%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A  +F+++ S    +PD YS +  ++ C+   + + G  LH   ++ G +    V+N ++
Sbjct: 289 AFDVFIEMQS-FGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALI 347

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y                          F + C     ++ A  +F  M  +D   +N+
Sbjct: 348 AMYLG------------------------FDNRC-----MEDALRIFFSMDVKDCCTWNS 378

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           ++ G  + G  +  + LF ++  L V  D+Y+F++V+  C D   L+ G+Q+H L  K G
Sbjct: 379 VLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVG 438

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F       N  +          DA K FE       + I +N ++ G A  G+   AL  
Sbjct: 439 FD-----TNKYVGK--------DAKKCFETTSND--NAIIWNSIIFGYAQHGQGNIALEL 483

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSN--AAITMY 333
           F  M    ++P  +TFV+V++AC        G ++  Q+M+S F     + +   A+ +Y
Sbjct: 484 FYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKI-IQSMESDFGIPLRMEHYACAVDLY 542

Query: 334 SSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
              G ++E   +   +  E D +   T++   A R+ G   + +++    + + P++ + 
Sbjct: 543 GRAGYLEEGKALVETMPFEPDAMVLRTLLG--ACRSCGNIELASHVAKMLLVLEPEDHST 600

Query: 393 GSLLA 397
             LL+
Sbjct: 601 YVLLS 605



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)

Query: 494 LSSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           L S  R S  +L + +  H   +K+  IS +   N +IT Y+KC  L  +L++F+ M ++
Sbjct: 4   LHSLIRTSHITLPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQR 63

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           DT+SWNA+IS Y    +         AM+  G    D  TF + L   + A  ++ G ++
Sbjct: 64  DTVSWNAVISGYVNTADLDSTWQLLNAMRVSGH-AFDNHTFGSTLKGVARAQRLELGQQL 122

Query: 612 FDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
              M+    N+  F       S +LD+  + G +D+A
Sbjct: 123 HSVMIKMRLNENVFSG-----SALLDMYAKCGRVDDA 154


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 179/551 (32%), Positives = 309/551 (56%), Gaps = 13/551 (2%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +  +L +C +   L+ G  +HS + ++GF   + +   LI  Y   G  ++A KVF+   
Sbjct: 40  YMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMP 99

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG 307
               + +S+   + G A  G  ++AL+ F  M  A +R ++ T+ SV+ AC    C   G
Sbjct: 100 ER--NVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERG 157

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+H    K+ F     V +A + ++S CG +++A  +F  + E+D+VSWN +I  YA +
Sbjct: 158 MQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQ 217

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG----FIEMVEMIHAFVFINGIITNIQV 423
           +    +   +  M   G+ PD FT GS+L +S      I++ + IH  +   G  ++I +
Sbjct: 218 DFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQ-IHGIIIQLGFGSHIDL 276

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN-GFPVQGLQHFSELLMSE 482
           + +LI AYAK+E +K A  ++ +M  +++I++  ++ G+     +  + L  F ++    
Sbjct: 277 NGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIF 336

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +  D+ T    L+ CA I+SL  G+QIH   +K      ++ GNA++ +YAK G+++ + 
Sbjct: 337 MEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDAT 396

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           R F  M EK+ ISW +LI+ Y +HG G EA++ +K M+  G +KP+  TF ++L ACSH+
Sbjct: 397 RAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEG-LKPNDITFLSLLFACSHS 455

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GL  +G   F++M+  Y  +P  +H SCM+DL  R G L+EA  +I   +I+  S  W A
Sbjct: 456 GLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGA 515

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           +  AC+ +G++ LG + A  LL  + +  + YV+L+ IYAA+G W++A  +R L++   +
Sbjct: 516 ILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSL 575

Query: 723 IKQPGCSWIGS 733
            K PG S I S
Sbjct: 576 KKIPGYSIIQS 586



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 126/535 (23%), Positives = 256/535 (47%), Gaps = 60/535 (11%)

Query: 54  KPDIYSLSTTL-----AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           +P++  LS++L       C    +   G  +H++ +R G  +  H++  ++  Y      
Sbjct: 29  EPELTHLSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFY------ 82

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
                                     K G    A +VFD+MP+R++  + A I+G  +NG
Sbjct: 83  -------------------------VKFGETINARKVFDRMPERNVVSWTAQISGYAKNG 117

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVV 226
           +    + +F +M +  VR + +++ SVL  C  GL  LE G Q+H  + K+ F   + V 
Sbjct: 118 HYQDALLVFSQMGRAGVRANQFTYGSVLRAC-TGLRCLERGMQIHGCIQKNRFIGNLFVQ 176

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           +AL+ ++  CGN+ DA  +FE       D +S+N ++ G A+    +++   F  M+   
Sbjct: 177 SALVDLHSKCGNMEDARYLFETMSER--DVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEG 234

Query: 287 LRPSELTFVSVMSAC--------LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           + P   T  SV+ A         +C     Q+H   ++ GF ++  ++ + I  Y+    
Sbjct: 235 VTPDCFTLGSVLKASSRANNLIKVC-----QIHGIIIQLGFGSHIDLNGSLIDAYAKSEG 289

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVGIRPDEFTFGSLL- 396
           +  A  ++  + +KD++S+  +++ YA++ +  R A+  + +MQ + +  D+ TF ++L 
Sbjct: 290 MKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLN 349

Query: 397 --ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
             A    + +   IHA         ++   NAL+  YAK+  I+ A + F+ M  +N+I+
Sbjct: 350 VCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVIS 409

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYV 513
           W +LI G+  +G+  + +  + ++    L+P++ T    L +C+       G +  +  +
Sbjct: 410 WTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMI 469

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHG 567
            K N++ +    + MI L+A+ G L+ +  +   M I+ ++  W A++ A + +G
Sbjct: 470 TKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYG 524



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/359 (22%), Positives = 154/359 (42%), Gaps = 58/359 (16%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           D+  +F  +     + PD ++L + L A +   N     Q+H   ++ G  ++  +  ++
Sbjct: 222 DSFRMFYSM-MGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSL 280

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +  Y  +  + S   ++  +   DV S+T  ++   +     Y+ E  D           
Sbjct: 281 IDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYAR--KCSYSREALD----------- 327

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
                            LF++M  + +  D+ +F ++L+VC D   L  GRQ+H+L  K 
Sbjct: 328 -----------------LFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKY 370

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
             S  V+  NAL+ MY   G + DA + F E K    + IS+  ++ G    G   EA+ 
Sbjct: 371 KPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEK--NVISWTSLITGYGKHGYGHEAIA 428

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV------------ 325
            ++ M    L+P+++TF+S++ AC         H+     G+E + ++            
Sbjct: 429 LYKKMEYEGLKPNDITFLSLLFAC--------SHSGLTGEGWECFNNMITKYNILPRAEH 480

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVS-WNTMI---STYAQRNLGRSAILAYLEM 380
            +  I +++  G+++EA  +  ++  K   S W  ++   S Y   +LG  A    L M
Sbjct: 481 YSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRM 539


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 300/563 (53%), Gaps = 10/563 (1%)

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
             +EM   DV    +S+  +   C     L  GR +H  + ++  +   S+ N L+ MY 
Sbjct: 74  FLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYC 133

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           +CG+ +D  KVF+E    + + +S+ +++   A  G +E+A+  F DM  + +RP+   +
Sbjct: 134 DCGSCIDVQKVFDEM--LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +S++ +CL P    +G Q+H+  +++   A  +V  A   MY  CG ++ A ++F  +  
Sbjct: 192 MSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
           ++ V+W  ++  Y Q      A+  +  M   G+  DEF F  +L     +E   M   I
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQI 311

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+ +   G  + + V   L+  Y K   I+ AY+ F  +S  N ++W+ LI+GF  +G  
Sbjct: 312 HSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
              ++ F+ L    +  + +  +    +CA  ++L  G Q HG  +K  L+S +   +AM
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +T+Y+KCG LD + R F  + E D ++W A+IS YA HG   EA+  F+ MQ  G ++P+
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG-VRPN 490

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             TF AVL+ACSH+GLV +  +   SM  DYG  P  DH  CM+D   RAG L EA  +I
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELI 550

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
           N    +  + +W +L   C AH +L+LG+I A  L   +    + Y+LL N+Y+A G WE
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWE 610

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           EA ++R+L+    + K+  CSWI
Sbjct: 611 EAGHVRKLMAERELKKEVSCSWI 633



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 243/551 (44%), Gaps = 43/551 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L +LS+ G  ++A H F++      +    +S      AC  LR+ A G  +H    
Sbjct: 56  NLHLVSLSKQGKLKEA-HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R        + N +L +Y +    + V++VF E+   ++ SW   +SA  K G ++ A  
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA-- 172

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                                        I LF +M    +R ++  + S+L  C     
Sbjct: 173 -----------------------------IRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+Q+HS V ++  +  ++V  A+  MY  CG +  A  VF+       + +++  +M
Sbjct: 204 LELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQ--NAVTWTGLM 261

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G     ++E AL  F  M +  +   E  F  V+  C       +G Q+H+  +K G E
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAE 321

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV    +  Y  CG I+ A   F R+ E + VSW+ +IS ++Q       I  +  +
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSL 381

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +S G+  + F + S+    A+   + M    H      G+++ +   +A+++ Y+K  R+
Sbjct: 382 RSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRL 441

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A + F ++   + + W  +I+G+  +G   + L  F  +    +RP+  T    L++C
Sbjct: 442 DYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC 501

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTIS 555
           +    +   KQ  G + ++  +   +   + MI  Y++ G L  +L + N M  E D +S
Sbjct: 502 SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMS 561

Query: 556 WNALISAYAQH 566
           W +L+     H
Sbjct: 562 WKSLLGGCWAH 572


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 205/617 (33%), Positives = 315/617 (51%), Gaps = 17/617 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           F S   K G    A ++FDKM   ++  YN++I+G  +    D  + LF +  +L ++ D
Sbjct: 7   FSSRQCKCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLD 66

Query: 189 NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            Y+ A  L+ C  +G L  G+ +H L+   G    V + N+LI MY  CG V  A  +F+
Sbjct: 67  KYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFD 126

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL----- 302
            +     D +S+N ++ G    G+ EE L   + M    L  +  T  S + AC      
Sbjct: 127 HSDKL--DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNG 184

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           C   G  +H  A+K G      V  A + MY+  G +D+A  IF ++ +K++V +N M++
Sbjct: 185 CKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMA 244

Query: 363 TYAQRNL-----GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFI 414
              Q+          A+  + EM+S GI+P  FT+ SLL +   +E     + +HA +  
Sbjct: 245 GLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCK 304

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           NG++++  + + LI  Y+    +  A   F+++    I+    +I G+L NG     L  
Sbjct: 305 NGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSL 364

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F ELL  E +PDE+  S  +SSCA +  LR G+QI G+  K  +       N+ I +YAK
Sbjct: 365 FYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAK 424

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
            GDL  +   F  M   D +SW+ +I + AQHG   EA+  F+ M+  G I+P+   F  
Sbjct: 425 SGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCG-IEPNHFAFLG 483

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           VL ACSH GLV++G R FD+M  DY       H  C++DLLGRAG L +AE +I     +
Sbjct: 484 VLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFE 543

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
                W AL SAC  H +    + +A  ++E E    + YVLL NIY  AG    A+ +R
Sbjct: 544 HEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVR 603

Query: 715 ELLKRTGVIKQPGCSWI 731
            L++   + K+PG SWI
Sbjct: 604 TLMEERRIKKEPGLSWI 620



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 184/393 (46%), Gaps = 48/393 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA--FGNQLHAY 82
           N  +A   ++G Y++ L +  ++H +  L  + Y+L + L AC++  N    FG  LH +
Sbjct: 137 NSLIAGYVQNGKYEELLTILQKMHQN-GLAFNTYTLGSALKACSSNFNGCKMFGTMLHDH 195

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           A++ GL                               + DV   T  L    K G +D A
Sbjct: 196 AIKLGL-------------------------------HLDVVVGTALLDMYAKTGSLDDA 224

Query: 143 CEVFDKMPDRDLPVYNAMITG-CTENGYED----IGIGLFREMHKLDVRRDNYSFASVLS 197
            ++FD+M D+++ +YNAM+ G   +   ED      + LF EM    ++   ++++S+L 
Sbjct: 225 IQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLK 284

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C      +F +Q+H+L+ K+G      + + LI +Y   G+++DA   F          
Sbjct: 285 ACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTI-- 342

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           +    M+ G    G  E AL  F ++L    +P E  F ++MS+C      R G Q+   
Sbjct: 343 VPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGH 402

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A K G   +T   N+ I MY+  G +  A + F +++  DIVSW+TMI + AQ      A
Sbjct: 403 ATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEA 462

Query: 374 ILAYLEMQSVGIRPDEFTF-GSLLASS--GFIE 403
           +  +  M+S GI P+ F F G L+A S  G +E
Sbjct: 463 LRFFELMKSCGIEPNHFAFLGVLIACSHRGLVE 495



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 5/154 (3%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G ++ AL LF ++  +++ KPD +  ST +++CAN+     G Q+  +A + G+  + 
Sbjct: 354 QNGEFESALSLFYEL-LTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFT 412

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
              N+ + +Y  + DL +    F +++NPD+ SW+T + +  + GH   A   F+ M   
Sbjct: 413 IFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSC 472

Query: 153 DLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
            +      +  ++  C+  G  + G+  F  M K
Sbjct: 473 GIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEK 506


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 198/619 (31%), Positives = 318/619 (51%), Gaps = 14/619 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D +     L+   K+G +  A  +FD MP+R+   +  ++ G    G  +  + LFR + 
Sbjct: 81  DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140

Query: 182 KLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           +     +++   ++L V    DA  L  G  +H+   K G      V  ALI  Y  CG 
Sbjct: 141 REGHEVNHFVLTTILKVLVTMDAPGLACG--IHACACKLGHDRNAFVGTALIDAYSLCGA 198

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           V  A  VF+   G   D +++  M+   +     E AL  F  M +   +P+     S +
Sbjct: 199 VCHARCVFDGIVGK--DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSAL 256

Query: 299 SACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
            A +C     +G  +H  ++K+ ++    V  A + MY+ CG I++A  IF  +   D++
Sbjct: 257 KAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVI 316

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
            W+ +IS YAQ      A   +L M    + P+EF+   +L   A+  F+E+ E IH   
Sbjct: 317 LWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLA 376

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G  + + V NAL+  YAK   ++ + +IF ++   N ++WNT+I G+  +GF    L
Sbjct: 377 IKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDAL 436

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F E+  + +   + T S  L +CA  SS++H  QIH  + K+   +   + N++I  Y
Sbjct: 437 SVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTY 496

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           AKCG +  +L+VF  ++E D +SWN++ISAYA HG    A+  F  M     IK +  TF
Sbjct: 497 AKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALELFDRMNK-SDIKANDVTF 555

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            ++LS C   GLV+ G  +F+SM+ D+   P+ +H +C++ LLGRAG L +A + I    
Sbjct: 556 VSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIP 615

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
                  W AL S+C  H N+ LGR  A  +L+ E    + YVLLSN+YAAAG+ +E A 
Sbjct: 616 STPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVAL 675

Query: 713 IRELLKRTGVIKQPGCSWI 731
            R+ ++  GV K+ G SW+
Sbjct: 676 WRKSMRNVGVKKEAGLSWV 694



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 141/595 (23%), Positives = 266/595 (44%), Gaps = 51/595 (8%)

Query: 35  GHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           G +++AL LF ++    H++    + L+T L     +        +HA A + G      
Sbjct: 127 GEFEEALELFRRLQREGHEVNH--FVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAF 184

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V   ++  Y     +   + VF  I   D  +WT                          
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWT-------------------------- 218

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SVCDAGLLEFGRQLH 211
                AM++  +EN   +  +  F +M     + + +   S L  +VC +  L  G+ +H
Sbjct: 219 -----AMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSAL-LGKGIH 272

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               K+ +     V  AL+ MY  CG++ DA  +FE       D I ++ ++   A   +
Sbjct: 273 GCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHD--DVILWSFLISRYAQSCQ 330

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
            E+A   F  M+ + + P+E +   V+ AC       +G Q+H  A+K G+E+   V NA
Sbjct: 331 NEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNA 390

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ C  ++ +  IF+ LQ+ + VSWNT+I  Y Q      A+  + EM++  +   
Sbjct: 391 LMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLST 450

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           + TF S+L   A++  I+    IH+ +  +    +  V N+LI  YAK   I+ A ++F 
Sbjct: 451 QVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFE 510

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
           ++   ++++WN++I+ + L+G     L+ F  +  S+++ ++ T    LS C     +  
Sbjct: 511 SIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQ 570

Query: 506 GKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAY 563
           G  +   ++ ++ I   M     ++ L  + G L  +L+ + ++      + W AL+S+ 
Sbjct: 571 GLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSC 630

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKP-DQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
             H   K       A + V  I+P D+ T+  + +  + AG++D+      SM N
Sbjct: 631 VVH---KNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRN 682



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 180/396 (45%), Gaps = 58/396 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  ++S   + A  +F+++  S  + P+ +SLS  L ACAN+     G Q+H  A++ G
Sbjct: 322 ISRYAQSCQNEQAFEMFLRMMRSFVV-PNEFSLSGVLQACANIAFLELGEQIHNLAIKLG 380

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V N ++ +Y   R++ +   +FS +Q+ +  SW                     
Sbjct: 381 YESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSW--------------------- 419

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                     N +I G  ++G+ +  + +F EM    +     +F+SVL  C +   ++ 
Sbjct: 420 ----------NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKH 469

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
             Q+HSL+ KS F+    V N+LI  Y  CG + DA KVFE      CD +S+N ++   
Sbjct: 470 AVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI--VECDVVSWNSIISAY 527

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAMKSG 318
           A  GR   AL  F  M  + ++ +++TFVS++S C    +  Q        +    +K  
Sbjct: 528 ALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPS 587

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMIST---YAQRNLGRSAI 374
            E YT +    + +    G++ +A      +      + W  ++S+   +    LGR A 
Sbjct: 588 MEHYTCI----VRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAA 643

Query: 375 LAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEM 407
              L+++      DE T+    ++ A++G ++ V +
Sbjct: 644 EKVLDIEP----HDETTYVLLSNMYAAAGILDEVAL 675



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    +SG  +DAL +F ++ ++H L   + + S+ L ACAN  +     Q+H+   
Sbjct: 420 NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQV-TFSSVLRACANTSSIKHAVQIHSLIE 478

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++       V N+++  Y     +    +VF  I   DV SW + +SA    G    A E
Sbjct: 479 KSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALE 538

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
           +FD+M   D+      + ++++ C   G  + G+ LF  M   H++    ++Y+
Sbjct: 539 LFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYT 592



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 38/312 (12%)

Query: 450 RNIITWNTLINGFLLNGFPV-QGLQHFSELLMSELRP--DEYTLSVALSSCARISSLRHG 506
           R+++   + ING L       + LQ   + L S   P  D Y  +  L  C      R G
Sbjct: 5   RSLLPTFSQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAG 64

Query: 507 KQIHGYVLKNNLISKMSL--GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
           + +H  V++   ++++     N ++  YAK G L  + R+F+ M E++ +S+  L+  YA
Sbjct: 65  RAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYA 124

Query: 565 QHGEGKEAVSCFKAMQDVGR--------------IKPDQATFTAVLSACSHAGLVDDGTR 610
             GE +EA+  F+ +Q  G               +  D       + AC+     D    
Sbjct: 125 LRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAF 184

Query: 611 IFDSMVNDYGFIPAEDHLSCMLD-LLGRAGYL-----------DEAERVINS---QHIQA 655
           +  ++++ Y    A  H  C+ D ++G+               D  E  +N+     +  
Sbjct: 185 VGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTG 244

Query: 656 RSDNWWALFSACAAHGNLR---LGRIIAGLLLEREQD-KPSVYVLLSNIYAAAGLWEEAA 711
              N + L SA  A   L    LG+ I G  ++   D +P V   L ++YA  G  E+A 
Sbjct: 245 FKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAH 304

Query: 712 NIRELLKRTGVI 723
            I E++    VI
Sbjct: 305 AIFEMIPHDDVI 316


>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
 gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
          Length = 688

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 199/605 (32%), Positives = 299/605 (49%), Gaps = 80/605 (13%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   R  H+ + KS  +    ++N L++ Y   G + DA +VF+E    + +  SYN ++
Sbjct: 33  LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIP--LRNTFSYNALL 90

Query: 264 DGLASVGRVEEALIRFR----------DMLVASLRP-----------------------S 290
              A +GR +EA   F           + +VA+L                         +
Sbjct: 91  SAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLN 150

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             +F S +SAC      R G QVH    +S       + +A + MY+ C + ++A  +F 
Sbjct: 151 AYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFD 210

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE 406
            + E+++VSWN++I+ Y Q      A++ ++EM + G  PDE T  S++ A +G     E
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADRE 270

Query: 407 --MIHA-FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR------------- 450
              +HA  V  + +  ++ ++NAL+  YAK  R  +A  IF +M  R             
Sbjct: 271 GRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYA 330

Query: 451 ------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
                             N+I WN LI  +  NG   + ++ F +L    + P  YT   
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSLRVFN 546
            L++C  I+ L+ G+Q H +VLK          S + +GN+++ +Y K G +D   +VF 
Sbjct: 391 VLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D +SWNA+I  YAQ+G  K+A+  F+ M       PD  T   VLSAC H+GLVD
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERML-CSNENPDSVTMIGVLSACGHSGLVD 509

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G R F SM  D+G  P+ DH +CM+DLLGRAG+L EAE +IN   ++  S  W +L  A
Sbjct: 510 EGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGA 569

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ LG   AG L E +      YVLLSN+YA  G W E   +R  +K  GV KQP
Sbjct: 570 CRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQP 629

Query: 727 GCSWI 731
           GCSWI
Sbjct: 630 GCSWI 634



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/585 (27%), Positives = 268/585 (45%), Gaps = 61/585 (10%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           ++R  H+     L   + +S  L       +  L +  NL  A      HA  L++ +  
Sbjct: 1   MARHLHHHHGQELVAHLRASSPL-------ADLLRSAPNLSGA---RAAHARILKSPVAG 50

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              + NT++S Y     L   +RVF EI   + +S+   LSA  ++G  D A  +F+ +P
Sbjct: 51  ETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIP 110

Query: 151 DRDLPVYNAMITGCTEN--GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFG 207
           D D   YNA++     +  G+    +     MH  D   + YSFAS LS C A      G
Sbjct: 111 DPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSRTG 170

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
            Q+H LV +S  +  V + +AL+ MY  C    DA +VF+       + +S+N ++    
Sbjct: 171 EQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER--NVVSWNSLITCYE 228

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK-SGFEAYT 323
             G V EAL+ F +M+ A   P E+T  SVMSAC      R G QVHA  +K        
Sbjct: 229 QNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDM 288

Query: 324 SVSNAAITMYSSCGK-------------------------------IDEACMIFARLQEK 352
            ++NA + MY+ CG+                               +++A ++F+++ EK
Sbjct: 289 VLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEK 348

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM----- 407
           ++++WN +I+ YAQ      AI  +++++   I P  +T+G++L + G I  +++     
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAH 408

Query: 408 IH----AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           +H     F F  G  +++ V N+L+  Y K   I    ++F  M+ R+ ++WN +I G+ 
Sbjct: 409 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYA 468

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKM 522
            NG     L  F  +L S   PD  T+   LS+C     +  G++  H     + +    
Sbjct: 469 QNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSR 528

Query: 523 SLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQH 566
                M+ L  + G L  +  + N M +E D++ W +L+ A   H
Sbjct: 529 DHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH 573



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 206/490 (42%), Gaps = 83/490 (16%)

Query: 25  NISLANLSR--SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           N  +A L+R   GH  DAL     +H+      + YS ++ L+ACA  +++  G Q+H  
Sbjct: 118 NAVVAALARHGRGHAADALRFLAAMHAD-DFVLNAYSFASALSACAAEKDSRTGEQVHGL 176

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
             R+      H+ + ++ +Y         +RVF  +   +V SW                
Sbjct: 177 VARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVVSW---------------- 220

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
                          N++IT   +NG     + LF EM       D  + +SV+S C AG
Sbjct: 221 ---------------NSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSAC-AG 264

Query: 203 LL--EFGRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK--------- 250
           L     GRQ+H+ + K       + + NAL+ MY  CG   +A  +F+            
Sbjct: 265 LAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETS 324

Query: 251 ---GYV-----------------CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
              GY                   + I++NV++   A  G  EEA+  F  +   S+ P+
Sbjct: 325 ILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDE 341
             T+ +V++AC      ++G Q H   +K GF      E+   V N+ + MY   G ID+
Sbjct: 385 HYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
              +F R+  +D VSWN MI  YAQ    + A+  +  M      PD  T   +L++ G 
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504

Query: 402 IEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN--MSPRNIITW 455
             +V+      H+    +GI  +      ++    +   +K+A ++ ++  M P +++ W
Sbjct: 505 SGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVL-W 563

Query: 456 NTLINGFLLN 465
            +L+    L+
Sbjct: 564 ASLLGACRLH 573



 Score = 43.9 bits (102), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 95/230 (41%), Gaps = 24/230 (10%)

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           RH    HG  L  +L +   L + + +     G      R+    +  +T   N L+S Y
Sbjct: 3   RHLHHHHGQELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTY 62

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFT--AVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A+ G  ++A   F  +       P + TF+  A+LSA +  G  D+   +F++       
Sbjct: 63  ARLGRLRDARRVFDEI-------PLRNTFSYNALLSAYARLGRPDEARALFEA------- 108

Query: 622 IPAEDHLS--CMLDLLGR--AGYLDEAERVINSQHIQARSDNWWAL---FSACAAHGNLR 674
           IP  D  S   ++  L R   G+  +A R + + H      N ++     SACAA  + R
Sbjct: 109 IPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALSACAAEKDSR 168

Query: 675 LGRIIAGLLLEREQ-DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
            G  + GL+      D   +   L ++YA     E+A  + + +    V+
Sbjct: 169 TGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPERNVV 218


>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
          Length = 836

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 363/755 (48%), Gaps = 85/755 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           NI +   SR+G Y D  HLF  + +S   +  P   +++  L  CA LR    G  +H Y
Sbjct: 29  NILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGY 88

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRV---FSEIQNPDVYSWTTFLSACTKMGHV 139
            ++ GL+      N ++S+Y      +++      FS I   DV SW             
Sbjct: 89  VIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSW------------- 135

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                             N++I G +ENG  +  + LF +M   +   +  + A+VL  C
Sbjct: 136 ------------------NSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC 177

Query: 200 DAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              L+E+GR    ++H  V + G    +SV NAL+  Y     +     +F  +K  + D
Sbjct: 178 --SLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSK--MGD 233

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
            +++N ++ G         AL  F+ +L A + P  ++ +S+++AC      RVG +VH 
Sbjct: 234 IVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHG 293

Query: 313 QAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +       TS+ NA ++ YS C + D A   F  +Q KD VSWN ++S  A      
Sbjct: 294 YIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHI 353

Query: 372 SAILAYL-EMQSVGIRPDEFTFGSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALI 428
                 L EM     + D  T  +++  S F  I+MV+  H +    G   +  V+NA++
Sbjct: 354 EQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAIL 413

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG---------------------- 466
            AYAK   +  A  +F +++ RNI+T NT+I+ +L N                       
Sbjct: 414 DAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNL 473

Query: 467 ---------FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
                       Q    F +L    L PD  +++  LS+C  +SS++  KQ HGY+L+ +
Sbjct: 474 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 533

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L   + L  A++  Y+KCG++  +  +F + + KD + + A+I AYA HG  ++AV  F 
Sbjct: 534 L-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 592

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M  +  IKPD    TA+LSACSHAGLVD G +IF S+   YG  P E+H +CM+DLL R
Sbjct: 593 KMLTLD-IKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLAR 651

Query: 638 AGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           +G L +A    ++       ++ W +L  AC  HG +++G++ A  L   E +    YV+
Sbjct: 652 SGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVI 711

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SNI+AA   WE   ++R+L+K   + K  GCSWI
Sbjct: 712 MSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWI 746



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 227/444 (51%), Gaps = 36/444 (8%)

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR- 288
           + MY   G++ DA  VF+E      D +  N+++   +  G   +    FR ML + +  
Sbjct: 1   MDMYGRIGSLADAHTVFDEMS--CSDAVCRNILITASSRAGLYNDVFHLFRAMLASGVDE 58

Query: 289 --PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCG---KID 340
             P+ +T   V+  C   RV   G  +H   +K+G E  T   NA ++MY+ CG    +D
Sbjct: 59  SMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMD 118

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
           +A + F+ +  KD+VSWN++I+ Y++  L   A+  + +M S    P+  T  ++L    
Sbjct: 119 DAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCS 178

Query: 401 FIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            +E      + IH FV  +G+  +I VSNAL++ Y+K   ++    IF +    +I+TWN
Sbjct: 179 LVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWN 238

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           T+I G+++N +P + L+ F  LL + + PD  +L   L++CA++ +LR G ++HGY+ ++
Sbjct: 239 TVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRH 298

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L+ + SL NA+++ Y++C   D + R F  +  KD++SWNA++SA A      E    
Sbjct: 299 PELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIEQF-- 356

Query: 576 FKAMQDVGR--IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND-------YGFIPAED 626
           F+ + ++     + D  T   ++   +  G+          MV +        G+     
Sbjct: 357 FRLLGEMWHDVTQWDSVTILNIIRMSTFCGI---------KMVQESHGYSLRVGYTGDSS 407

Query: 627 HLSCMLDLLGRAGYLDEAERVINS 650
             + +LD   + GYL +AE +  S
Sbjct: 408 VANAILDAYAKCGYLHDAETLFRS 431



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 145/520 (27%), Positives = 234/520 (45%), Gaps = 63/520 (12%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRD---NY 190
           ++G +  A  VFD+M   D    N +IT  +  G Y D+   LFR M    V        
Sbjct: 6   RIGSLADAHTVFDEMSCSDAVCRNILITASSRAGLYNDV-FHLFRAMLASGVDESMPTAV 64

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV---DACKVF 246
           + A VL VC    +L  GR +H  V K+G        NAL++MY  CG  +   DA   F
Sbjct: 65  TVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAF 124

Query: 247 EEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--- 301
                 +C  D +S+N ++ G +  G  EEAL  F  M+     P+  T  +V+  C   
Sbjct: 125 ST----ICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 180

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
                 G ++H   ++ G E   SVSNA +  YS   ++     IF   +  DIV+WNT+
Sbjct: 181 EYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTV 240

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING- 416
           I+ Y        A+  +  +   G+ PD  +  SLL   A  G + +   +H ++F +  
Sbjct: 241 IAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPE 300

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++    + NAL+S Y++ +R   A++ F  +  ++ ++WN +++    +   ++  Q F 
Sbjct: 301 LLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHIE--QFFR 358

Query: 477 ELLMSELRPDEYTL-SVALSSCARISS---LRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             L+ E+  D     SV + +  R+S+   ++  ++ HGY L+       S+ NA++  Y
Sbjct: 359 --LLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAILDAY 416

Query: 533 AKCGDL----------------------DCSLR---------VFNMMIEKDTISWNALIS 561
           AKCG L                       C L+          FN M EKD  +WN +  
Sbjct: 417 AKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNLMSR 476

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            YAQ+    +A   F  +Q  G + PD  + T +LSAC H
Sbjct: 477 LYAQNDLCDQAFCLFHQLQSEG-LNPDTISITNILSACIH 515


>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
          Length = 697

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/605 (31%), Positives = 317/605 (52%), Gaps = 13/605 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH--KLDVRRDNYSFAS 194
           G +  A +VFDKMP RD+  + A++ G       +  + LF  M    L V  D Y  + 
Sbjct: 42  GKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSV 101

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C  +  + +G  LH+   K+     V V +AL+ MY   G +  +C+VF E     
Sbjct: 102 ALKACGQSSNIAYGESLHAYAEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMP--F 159

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLCPR---VGYQ 309
            + +++   + GL   G   E L  F  M     L      F   + AC   R    G +
Sbjct: 160 RNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGRE 219

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +  GF A   V+N+  TMY+ CG++ +   +F  + E+D+V W ++I+ Y +   
Sbjct: 220 IHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQ 279

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNA 426
              A+  +L M++  + P+E TF S  A+   +  +   E +H  VF  G+  ++ VSN+
Sbjct: 280 EEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNS 339

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           ++  Y+   ++  A  +F  M  R+II+W+T+I G+    F  +  ++FS +  +  +P 
Sbjct: 340 MMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPT 399

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++ L+  LS    ++ L  G+Q+H   L   L    ++ +A+I +Y+KCG +  + +VF 
Sbjct: 400 DFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFE 459

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
                D +S  A+I+ YA+HG+ +EA+  F+    +   +PD  TF +VL+ACSH+G +D
Sbjct: 460 EKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLS-FRPDDVTFISVLTACSHSGQLD 518

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            G + F+ M  +Y   PA++H  CM+DLL RAG L++AE++IN    +     W  L  A
Sbjct: 519 LGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRA 578

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C   G++  GR  A  +LE +    +  V L+NI+++ G W+EAAN+R+ +K  GVIK+P
Sbjct: 579 CKEKGDVERGRRAAQRILELDPTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEP 638

Query: 727 GCSWI 731
           G S I
Sbjct: 639 GWSSI 643



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 158/575 (27%), Positives = 272/575 (47%), Gaps = 57/575 (9%)

Query: 38  QDALHLFVQIHSSHKLKP-----DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++AL LF    S+ ++ P     D Y LS  L AC    N A+G  LHAYA +  L +  
Sbjct: 76  EEALILF----SAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLSSV 131

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V + +L +Y     +    RVF+E+   +  +WT F                       
Sbjct: 132 FVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAF----------------------- 168

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLSVC-DAGLLEFGRQL 210
                   ITG    G    G+  F +M +   +  D ++FA  L  C D   +++GR++
Sbjct: 169 --------ITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREI 220

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+ V   GF+ ++ V N+L TMY  CG + D  ++FE       D + +  ++     +G
Sbjct: 221 HTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLFESMSER--DVVLWTSLITAYIRIG 278

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSVSN 327
           + E+A+  F  M  + + P+E TF S  +AC    R+  G Q+H      G     SVSN
Sbjct: 279 QEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSN 338

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + + MYS+C K+D A ++F  ++ +DI+SW+T+I  Y+Q   G      +  M+  G +P
Sbjct: 339 SMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQP 398

Query: 388 DEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
            +F   SLL+ SG + ++E    +HA     G+  N  + +ALI+ Y+K   I +A ++F
Sbjct: 399 TDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVF 458

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                 +I++   +ING+  +G   + +  F + L    RPD+ T    L++C+    L 
Sbjct: 459 EEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLD 518

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
            G Q    + +N N+         M+ L  + G L+ + ++ N M  +KD + W  L+ A
Sbjct: 519 LGFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRA 578

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
             + G+ +      +A Q +  + P   +FT +++
Sbjct: 579 CKEKGDVERGR---RAAQRILELDP--TSFTTLVT 608



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 212/481 (44%), Gaps = 50/481 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L  +G + + L  F Q+    +L  D ++ +  L ACA+LR   +G ++H + +  G
Sbjct: 169 ITGLVHAGLHYEGLRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVIVKG 228

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             A   VAN++ ++Y                               T+ G +     +F+
Sbjct: 229 FAAILWVANSLATMY-------------------------------TECGEMQDGLRLFE 257

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M +RD+ ++ ++IT     G E+  +  F  M    V  +  +FAS  + C +   L +
Sbjct: 258 SMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLVW 317

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDG 265
           G QLH  V   G    +SV N+++ MY  C  +  A  +F+   G  C D IS++ ++ G
Sbjct: 318 GEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQ---GMRCRDIISWSTIIGG 374

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
            +     EE    F  M  A  +P++    S++S      V   G QVHA A+  G E  
Sbjct: 375 YSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQVHALALYLGLEQN 434

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            ++ +A I MYS CG I EA  +F      DIVS   MI+ YA+      AI  + +   
Sbjct: 435 PTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEHGKCEEAIDLFEKSLK 494

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNER 436
           +  RPD+ TF S+L +      +++   F + N +  N  +  A      ++    +  R
Sbjct: 495 LSFRPDDVTFISVLTACSHSGQLDL--GFQYFNLMQENYNMRPAKEHYGCMVDLLCRAGR 552

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A ++ + M   ++ + W TL+      G   +G +    +L  EL P  +T  V L+
Sbjct: 553 LNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRIL--ELDPTSFTTLVTLA 610

Query: 496 S 496
           +
Sbjct: 611 N 611


>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  323 bits (827), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 200/566 (35%), Positives = 300/566 (53%), Gaps = 33/566 (5%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL--VSVVNALITMYFNCGNVVDACKVFE 247
           ++AS+   C     L+ G  LH  V     +    V + N +I MY  CG++  A  VF+
Sbjct: 92  TYASLFHACAQKKCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFD 151

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP--R 305
           +      + +S+  ++ G A  G V E    F  +L A  RP+E  F S++SAC     +
Sbjct: 152 QMSHR--NIVSWTALISGHAQSGLVRECFSLFSGLL-AHFRPNEFAFASLLSACEEHDIK 208

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSS--------CGKIDEACMIFARLQEKDIVSW 357
            G QVHA A+K   +A   V+N+ ITMYS             D+A  +F  ++ +++VSW
Sbjct: 209 CGMQVHAVALKISLDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSW 268

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----------SGFIEMVEM 407
           N+MI+ +  R LG  AI  +  M   GI  D  T  S+ +S          + ++     
Sbjct: 269 NSMIAXFQLRGLGDKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQ 328

Query: 408 IHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPR-NIITWNTLINGFLLN 465
           +H     +G+I+ I+V  ALI +YA     I   Y+IFH+ S + +I++W  LI+ F   
Sbjct: 329 LHCLTIKSGLISEIEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALISVFAER 388

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
             P Q    F +L      PD YT S+AL +CA   + +H   IH  V+K        L 
Sbjct: 389 D-PEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLC 447

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           NA++  YA+CG L  S +VFN M   D +SWN+++ +YA HG+ K+A+  F+ M     +
Sbjct: 448 NALMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQMN----V 503

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            PD ATF A+LSACSH GLVD+G ++F+SM +D+G +P  DH SCM+DL GRAG + EAE
Sbjct: 504 CPDSATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAE 563

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +I    ++  S  W +L  +C  HG  RL ++ A    E E +    YV +SNIY++ G
Sbjct: 564 ELIRKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGG 623

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            + +A  IR  +    V K+PG SW+
Sbjct: 624 SFTKAGLIRNEMSDFKVRKEPGLSWV 649



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 152/610 (24%), Positives = 277/610 (45%), Gaps = 74/610 (12%)

Query: 4   RRITATI--AGNSNTSKE---LLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIY 58
           R+I  TI  A   N+S E   +   ++  +  LS  G+ ++AL L +  HSS  L+    
Sbjct: 37  RQIGLTISRARKVNSSAEPETIATNIDAQIRALSTQGNIEEALSL-LYTHSSLSLQ---- 91

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           + ++   ACA  +    G  LH Y L       P + N                      
Sbjct: 92  TYASLFHACAQKKCLQHGMTLHHYVLHKD----PTIQN---------------------- 125

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              DV+     ++   K GH+ YA  VFD+M  R++  + A+I+G  ++G       LF 
Sbjct: 126 ---DVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTALISGHAQSGLVRECFSLFS 182

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY----- 233
            +     R + ++FAS+LS C+   ++ G Q+H++  K      V V N+LITMY     
Sbjct: 183 GL-LAHFRPNEFAFASLLSACEEHDIKCGMQVHAVALKISLDANVYVANSLITMYSKRSG 241

Query: 234 FNCGNVV---DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           F  G      DA  +F+  +    + +S+N M+      G  ++A+  F  M    +   
Sbjct: 242 FGGGYAQTPDDAWTMFKSME--FRNLVSWNSMIAXFQLRGLGDKAICLFAHMYCNGIGFD 299

Query: 291 ELTFVSVMSAC-LCP---------RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC-GKI 339
             T +SV S+   C          R  +Q+H   +KSG  +   V  A I  Y++  G I
Sbjct: 300 RATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISEIEVVTALIKSYANLGGHI 359

Query: 340 DEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
            +   IF     + DIVSW  +IS +A+R+    A L + ++      PD +TF   L +
Sbjct: 360 SDCYRIFHDTSSQLDIVSWTALISVFAERD-PEQAFLLFCQLHRQSYLPDWYTFSIALKA 418

Query: 399 SGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
             +    +    IH+ V   G   +  + NAL+ AYA+   +  + Q+F+ M   ++++W
Sbjct: 419 CAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSEQVFNEMGCHDLVSW 478

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N+++  + ++G     L+ F ++    + PD  T    LS+C+ +  +  G ++   +  
Sbjct: 479 NSMLKSYAIHGQAKDALELFQQM---NVCPDSATFVALLSACSHVGLVDEGVKLFNSMSD 535

Query: 516 NN-LISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE---GK 570
           ++ ++ ++   + M+ LY + G + +    +  M ++ D++ W++L+ +  +HGE    K
Sbjct: 536 DHGVVPQLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGETRLAK 595

Query: 571 EAVSCFKAMQ 580
            A   FK ++
Sbjct: 596 LAADKFKELE 605


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 204/688 (29%), Positives = 344/688 (50%), Gaps = 46/688 (6%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           KPD       L  C++ +N   G ++H +    G +    V   ++ +Y     +   ++
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VF  ++  DV++WT                        R + +Y      C +  Y D  
Sbjct: 61  VFEILERKDVFAWT------------------------RMIGIY------CQQGDY-DRA 89

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +G+F +M + DV     ++ ++L+ C     L+ G ++H  + + GF   V V  ALI M
Sbjct: 90  LGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINM 149

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR--FRDMLVASLRPS 290
           Y  CG+V  A   F+  +    D +S+  M+   A V   + AL R  +R M +  + P+
Sbjct: 150 YNKCGSVRGAWDSFKRLEHR--DVVSWTAMI--AACVQHDQFALARWLYRRMQLDGVVPN 205

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           ++T  +V +A   P     G  V+        E+   V N+A+ M+ + G + +A  +F 
Sbjct: 206 KITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFE 265

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            + ++D+V+WN +I+ Y Q      A+  +  +Q  G++ ++ TF  +L    S   +  
Sbjct: 266 DMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAK 325

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            ++IH  V   G   +  V+ AL+S Y + E   QA++IF +M  +++ITW  +   +  
Sbjct: 326 GKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQ 385

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NGF  + LQ F E+ +   RP   TL   L +CA +++L+ G+QIH ++++N    +M +
Sbjct: 386 NGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVV 445

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             A+I +Y KCG +  ++ VF  M ++D + WN+++ AYAQHG   E +  F  MQ  G 
Sbjct: 446 ETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG- 504

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +K D  +F +VLSA SH+G V DG + F +M+ D+   P  +   C++DLLGRAG + EA
Sbjct: 505 VKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEA 564

Query: 645 -ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            + V+           W  L  AC  H      +  A  +LER+      YV+LSN+YAA
Sbjct: 565 VDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAA 624

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AG W+    +R+L++  GV K+PG S I
Sbjct: 625 AGDWDGVNRMRKLMRSRGVKKEPGRSSI 652



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 140/631 (22%), Positives = 269/631 (42%), Gaps = 51/631 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G Y  AL +F Q+     + P   +    L ACA+  +   G ++H   L+ G +   
Sbjct: 82  QQGDYDRALGMFYQMQEE-DVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   ++++Y     +      F  +++ DV SWT  ++AC +      A  ++ +M   
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRM-QL 199

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHS 212
           D  V N +      N Y D                 NY             L  G+ ++ 
Sbjct: 200 DGVVPNKITLYTVFNAYGD----------------PNY-------------LSEGKFVYG 230

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           LV+       V V+N+ + M+ N G + DA ++FE+      D +++N+++         
Sbjct: 231 LVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDR--DVVTWNIVITLYVQNENF 288

Query: 273 EEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
            EA+  F  +    ++ +++TFV   +V ++      G  +H    ++G++    V+ A 
Sbjct: 289 GEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATAL 348

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           +++Y  C    +A  IF  +  KD+++W  M   YAQ    + A+  + EMQ  G RP  
Sbjct: 349 MSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTS 408

Query: 390 FTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            T  ++L +   +  ++    IH+ +  N     + V  ALI+ Y K  ++ +A  +F  
Sbjct: 409 ATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEK 468

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M+ R+I+ WN+++  +  +G+  + LQ F+++ +  ++ D  +    LS+ +   S+  G
Sbjct: 469 MAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDG 528

Query: 507 KQIHGYVLKNNLISKM-SLGNAMITLYAKCGDL----DCSLRVFNMMIEKDTISWNALIS 561
            Q    +L++  I+    L   ++ L  + G +    D  L++   +   D I W  L+ 
Sbjct: 529 YQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL--PDGILWMTLLG 586

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A   H +  +A +   A + V    P  +    VLS    A    DG      ++   G 
Sbjct: 587 ACRTHNKTDQAKA---AAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGV 643

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
                  S  +++L R     E +R    +H
Sbjct: 644 KKEPGRSS--IEILNRVHEFLEGDRSHPRRH 672



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 32/166 (19%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G  ++AL LF ++    + +P   +L   L  CA+L     G Q+H++ +    +  
Sbjct: 384 AQNGFRKEALQLFQEMQLEGR-RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRME 442

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V   ++++Y                              C KM     A  VF+KM  
Sbjct: 443 MVVETALINMY----------------------------GKCGKMAE---AMSVFEKMAK 471

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           RD+ V+N+M+    ++GY D  + LF +M    V+ D  SF SVLS
Sbjct: 472 RDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLS 517


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 187/555 (33%), Positives = 300/555 (54%), Gaps = 21/555 (3%)

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F ++L +C A   L  GR +H+ +   G +       AL  MYF C    DA +VF+  
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 250 KGYVCDHISYNVMMDGLASVG---RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
                D +++N ++ G A  G      EA++R +       RP  +T VSV+ AC   R 
Sbjct: 78  PSR--DRVAWNAVVAGYARNGLPSSAMEAVVRMQGE-EGGERPDSVTLVSVLPACADARA 134

Query: 307 GY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            +   +VHA A+++G +   +VS A +  Y  CG ++ A  +F  +  ++ VSWN MI  
Sbjct: 135 LHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDG 194

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS------GFIEMVEMIHAFVFINGI 417
           YA       A+  +  M   G+   + T  S+LA+       G+++ V  +H  +   G+
Sbjct: 195 YADNGNATEAMALFWRMVQEGV---DVTDASVLAALQACGELGYLDEVRRVHELLVRVGL 251

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI-ITWNTLINGFLLNGFPVQGLQHFS 476
            +N+ V+NALI+ YAK +R   A Q+F+ +  +   I+WN +I GF  N  P    + F+
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFA 311

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            + +  +RPD +TL   + + A IS     + IHGY +++ L   + +  A+I +Y+KCG
Sbjct: 312 RMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCG 371

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  + R+F+   ++  I+WNA+I  Y  HG G+ AV  F+ M+  G + P++ TF +VL
Sbjct: 372 RVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSL-PNETTFLSVL 430

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           +ACSHAGLVD+G + F SM  DYG  P  +H   M+DLLGRAG LDEA   I +  I+  
Sbjct: 431 AACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPG 490

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              + A+  AC  H N+ L    A ++ E   ++   +VLL+NIYA A +W++ A +R  
Sbjct: 491 ISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTA 550

Query: 717 LKRTGVIKQPGCSWI 731
           +++ G+ K PG S I
Sbjct: 551 MEKKGLQKTPGWSII 565



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 147/576 (25%), Positives = 254/576 (44%), Gaps = 53/576 (9%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P + + +  L  CA   + A G  +HA     GL +    +  + ++Y   R     +RV
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F                                 MP RD   +NA++ G   NG     +
Sbjct: 74  FDR-------------------------------MPSRDRVAWNAVVAGYARNGLPSSAM 102

Query: 175 GLFREMHKLD--VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
                M   +   R D+ +  SVL  C DA  L   R++H+   ++G   LV+V  A++ 
Sbjct: 103 EAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLD 162

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            Y  CG V  A  VF+     V + +S+N M+DG A  G   EA+  F  M+   +  ++
Sbjct: 163 AYCKCGAVEAARAVFDCMP--VRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTD 220

Query: 292 LTFVSVMSACLCPRVGY-----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            + ++ + A  C  +GY     +VH   ++ G  +  SV+NA IT Y+ C + D A  +F
Sbjct: 221 ASVLAALQA--CGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVF 278

Query: 347 ARL-QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE-- 403
             L  +K  +SWN MI  + Q      A   +  MQ   +RPD FT  S++ +   I   
Sbjct: 279 NELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDP 338

Query: 404 -MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                IH +   + +  ++ V  ALI  Y+K  R+  A ++F +   R++ITWN +I+G+
Sbjct: 339 LQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGY 398

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISK 521
             +GF    ++ F E+  +   P+E T    L++C+    +  G++    + K+  L   
Sbjct: 399 GSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPG 458

Query: 522 MSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           M     M+ L  + G LD +   + NM IE     + A++ A   H   K      ++ Q
Sbjct: 459 MEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLH---KNVELAEESAQ 515

Query: 581 DVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
            +  + P++  +  +L+   ++A +  D  R+  +M
Sbjct: 516 IIFELGPEEGVYHVLLANIYANASMWKDVARVRTAM 551



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 218/484 (45%), Gaps = 48/484 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHK-LKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  +A  +R+G    A+   V++       +PD  +L + L ACA+ R      ++HA+A
Sbjct: 86  NAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFA 145

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           LRAGL    +V+  +L  Y                                K G V+ A 
Sbjct: 146 LRAGLDELVNVSTAVLDAY-------------------------------CKCGAVEAAR 174

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
            VFD MP R+   +NAMI G  +NG     + LF  M +  V   + S  + L  C + G
Sbjct: 175 AVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELG 234

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+  R++H L+ + G S  VSV NALIT Y  C     A +VF E  G     IS+N M
Sbjct: 235 YLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNEL-GNKKTRISWNAM 293

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           + G       E+A   F  M + ++RP   T VSV+ A      P     +H  +++   
Sbjct: 294 ILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL 353

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +    V  A I MYS CG++  A  +F   +++ +++WN MI  Y     G++A+  + E
Sbjct: 354 DQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEE 413

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNE 435
           M+  G  P+E TF S+LA+   +G ++  +   A +  + G+   ++    ++    +  
Sbjct: 414 MKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAG 473

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG---LQHFSELLMSELRPDEYTLSV 492
           ++ +A+    NM     I+    + G +L    +     L   S  ++ EL P+E    V
Sbjct: 474 KLDEAWSFIKNMPIEPGIS----VYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHV 529

Query: 493 ALSS 496
            L++
Sbjct: 530 LLAN 533


>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
 gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
          Length = 917

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 198/681 (29%), Positives = 349/681 (51%), Gaps = 42/681 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++ G   +AL  F ++     + PD  +  T L AC++     FG  LH   L
Sbjct: 274 NAIVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECIL 333

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G   +  V N I+++Y                            S+C   G +D A  
Sbjct: 334 QCGYDTHLIVGNCIMTMY----------------------------SSC---GRIDNAAA 362

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
            F  M +RD   +N +I+G  + G+ D  + LFR M    +  D ++F S++       +
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIID--GTARM 420

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           +  + L  L+ +SG    V +V+ALI M+   GNV +A  +F++ K    D + +  ++ 
Sbjct: 421 QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDR--DIVMWTSIIS 478

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
                G  ++AL   R M +  L  ++ T V+ ++AC        G  +HA A++ GF A
Sbjct: 479 SYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAA 538

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             +V NA I MY+ CG ++EA  +F +   K++VSWNT+ + Y QR+  R A+  + EMQ
Sbjct: 539 SPAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQ 597

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             G++ D+ +F ++L           IH  +   G+ ++  VS AL++ Y  ++ + +A 
Sbjct: 598 LEGLKADKVSFVTVLNGCSSASEGRKIHNILLETGMESDHIVSTALLNMYTASKSLDEAS 657

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS--SCAR 499
           +IF  M  R+I++WN +I G   +G   + +Q F  + +  + PD+ +    L+  S + 
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSS 717

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            SSL+  + +   +      +   +GNA+++++ + G L  + R F  + E+D  SWN +
Sbjct: 718 PSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVI 777

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++A+AQHGE ++A+  F+ MQ     +PD  T  +VLSACSH GL+++G   F SM  ++
Sbjct: 778 VTAHAQHGEVEQALKLFRRMQQESS-RPDSITLVSVLSACSHGGLIEEGYHHFTSMGREF 836

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G   +++H  C++DLL RAG LD+AE ++    + A    W  L SAC   G+ +  + +
Sbjct: 837 GIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRV 896

Query: 680 AGLLLEREQDKPSVYVLLSNI 700
              ++E +  +P+ YV+LS++
Sbjct: 897 GERVMELDPRRPAAYVVLSSV 917



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/629 (28%), Positives = 326/629 (51%), Gaps = 55/629 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD  +  T L  C+ + + + G  LH + L AGL+    V  +++ +Y     +   +
Sbjct: 99  LAPDRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDAR 158

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-PDRDLP---VYNAMITGCTENG 168
           RVF ++   DV SWT+ +    +      A E+F +M P   LP    Y   I+ C    
Sbjct: 159 RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISAC---- 214

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
                                   A V S+ D      G+ +HS V + GF   V V  A
Sbjct: 215 ------------------------AHVESMAD------GKLIHSQVLEDGFESDVVVSCA 244

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASL 287
           ++ MY  CG++ DA +VFE       + +S+N ++      G   EAL  F+ M L   +
Sbjct: 245 IVNMYGKCGSLEDAREVFERMPHP--NTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGI 302

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P ++TF+++++AC  P     G  +H   ++ G++ +  V N  +TMYSSCG+ID A  
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
            F+ + E+D +SWNT+IS +AQ      A+  +  M + GI PD+FTF S++  +  ++ 
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQE 422

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +++   +  +G+  ++ + +ALI+ +++   +++A  +F +M  R+I+ W ++I+ ++ 
Sbjct: 423 AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQ 482

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           +G     L     + +  L  +++TL  AL++CA +++L  GK IH + ++    +  ++
Sbjct: 483 HGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIERGFAASPAV 542

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GNA+I +YAKCG L+ + RVF+    K+ +SWN + +AY Q  + +EA+  F+ MQ  G 
Sbjct: 543 GNALINMYAKCGCLEEADRVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG- 600

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRAGYLD 642
           +K D+ +F  VL+ CS A    +G +I + ++ + G     DH+  + +L++   +  LD
Sbjct: 601 LKADKVSFVTVLNGCSSA---SEGRKIHNILL-ETGM--ESDHIVSTALLNMYTASKSLD 654

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHG 671
           EA R+ +    +    +W A+ +  A HG
Sbjct: 655 EASRIFSRMEFRDIV-SWNAMIAGKAEHG 682



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 189/684 (27%), Positives = 337/684 (49%), Gaps = 57/684 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++  S  L P+  + +T ++ACA++ + A G  +H+  L  G ++   V+  I
Sbjct: 187 EALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAI 245

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +++Y     L   + VF  + +P+  SW   ++ACT+ G    A   F +M         
Sbjct: 246 VNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQ-------- 297

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
            +  G T                      D  +F ++L+ C +   L FG  LH  + + 
Sbjct: 298 -LQGGITP---------------------DKVTFITILNACSSPATLTFGELLHECILQC 335

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G+   + V N ++TMY +CG + +A   F        D IS+N ++ G A  G  +EA+ 
Sbjct: 336 GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER--DAISWNTIISGHAQAGFCDEAVH 393

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            FR ML   + P + TF+S++      +    +    ++SG E    + +A I M+S  G
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYG 453

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL- 396
            + EA  +F  ++++DIV W ++IS+Y Q      A+     M+  G+  ++FT  + L 
Sbjct: 454 NVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALN 513

Query: 397 --ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
             AS   +   ++IHA     G   +  V NALI+ YAK   +++A ++FH    +N+++
Sbjct: 514 ACASLTALSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG-KNLVS 572

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+   ++      + LQ F E+ +  L+ D+ +    L+ C   SS   G++IH  +L
Sbjct: 573 WNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC---SSASEGRKIHNILL 629

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           +  + S   +  A++ +Y     LD + R+F+ M  +D +SWNA+I+  A+HG  +EA+ 
Sbjct: 630 ETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQ 689

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVD-DGTRIFDSMVNDYGFIPAEDHLSCMLD 633
            F+ MQ  G + PD+ +F  VL+A S +        R+ + +++D G+       + ++ 
Sbjct: 690 MFQRMQLEG-VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVS 748

Query: 634 LLGRAGYLDEAERVINSQHIQAR-SDNWWALFSACAAHGN----LRLGRIIAGLLLEREQ 688
           + GR+G L EA R    + I+ R + +W  + +A A HG     L+L R      +++E 
Sbjct: 749 MFGRSGRLAEARRAF--ERIRERDAASWNVIVTAHAQHGEVEQALKLFR-----RMQQES 801

Query: 689 DKPSVYVLLSNIYAAA--GLWEEA 710
            +P    L+S + A +  GL EE 
Sbjct: 802 SRPDSITLVSVLSACSHGGLIEEG 825



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/569 (27%), Positives = 278/569 (48%), Gaps = 56/569 (9%)

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F ++L +C     +  GR +HS V  S F     V NA I MY  CG V DA  VF+  
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQS- 62

Query: 250 KGYVCDH---ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-- 304
                DH   +S+N ++   A  G+ ++A   F+ M +  L P  +TFV+V+  C     
Sbjct: 63  ----LDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGD 118

Query: 305 -RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
              G  +H   +++G E    V  + I MY  CG +++A  +F +L  +D+VSW +MI T
Sbjct: 119 LSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMT 178

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN 420
           Y Q +    A+  +  M+  G+ P+  T+ + +++   +E +   ++IH+ V  +G  ++
Sbjct: 179 YVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESD 238

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-L 479
           + VS A+++ Y K   ++ A ++F  M   N ++WN ++     +G  V+ L +F  + L
Sbjct: 239 VVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQL 298

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              + PD+ T    L++C+  ++L  G+ +H  +L+    + + +GN ++T+Y+ CG +D
Sbjct: 299 QGGITPDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRID 358

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +   F+ M+E+D ISWN +IS +AQ G   EAV  F+ M   G I PD+ TF +++   
Sbjct: 359 NAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEG-ITPDKFTFISIIDGT 417

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN---------- 649
           +         +I   ++ + G       +S ++++  R G + EA  + +          
Sbjct: 418 ARM----QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMW 473

Query: 650 ----SQHIQARSD-----------------NWWAL---FSACAAHGNLRLGRIIAGLLLE 685
               S ++Q  S                  N + L    +ACA+   L  G++I    +E
Sbjct: 474 TSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHAHAIE 533

Query: 686 RE-QDKPSVYVLLSNIYAAAGLWEEAANI 713
           R     P+V   L N+YA  G  EEA  +
Sbjct: 534 RGFAASPAVGNALINMYAKCGCLEEADRV 562



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/594 (26%), Positives = 281/594 (47%), Gaps = 46/594 (7%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  CA     A G  +H+    +  +    V N  + +Y     +     VF  + +P  
Sbjct: 9   LGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSLDHPSQ 68

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW + L+A  + G    A ++F +M  + L                             
Sbjct: 69  VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAP--------------------------- 101

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               D  +F +VL  C A G L  G+ LH  V ++G    V V  +LI MY  CG V DA
Sbjct: 102 ----DRITFVTVLDGCSAIGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDA 157

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+  K  + D +S+  M+       R  EAL  F  M  + + P+ +T+ + +SAC 
Sbjct: 158 RRVFD--KLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACA 215

Query: 303 CPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                  G  +H+Q ++ GFE+   VS A + MY  CG +++A  +F R+   + VSWN 
Sbjct: 216 HVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNA 275

Query: 360 MISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
           +++   Q      A+  +  MQ   GI PD+ TF ++L   +S   +   E++H  +   
Sbjct: 276 IVAACTQHGCCVEALWYFQRMQLQGGITPDKVTFITILNACSSPATLTFGELLHECILQC 335

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  T++ V N +++ Y+   RI  A   F  M  R+ I+WNT+I+G    GF  + +  F
Sbjct: 336 GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLF 395

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             +L   + PD++T    +   AR   ++  K +   ++++ +   + L +A+I ++++ 
Sbjct: 396 RRMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALINMHSRY 452

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  +  +F+ M ++D + W ++IS+Y QHG   +A+ C + M+  G +  D    TA 
Sbjct: 453 GNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTA- 511

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           L+AC+    + +G  I    + + GF  +    + ++++  + G L+EA+RV +
Sbjct: 512 LNACASLTALSEGKLIHAHAI-ERGFAASPAVGNALINMYAKCGCLEEADRVFH 564



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 226/439 (51%), Gaps = 16/439 (3%)

Query: 293 TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF++++  C        G  VH++   S F     V NA I MY  CG +++A  +F  L
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
                VSWN++++ +A+    + A   +  M+  G+ PD  TF ++L   ++ G +   +
Sbjct: 64  DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGDLSRGK 123

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           ++H FV   G+  N+ V  +LI  Y K   ++ A ++F  ++ +++++W ++I  ++ + 
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
             V+ L+ F  +  S + P+  T + A+S+CA + S+  GK IH  VL++   S + +  
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y KCG L+ +  VF  M   +T+SWNA+++A  QHG   EA+  F+ MQ  G I 
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDE 643
           PD+ TF  +L+ACS    +  G  + + ++   G+   + HL   +C++ +    G +D 
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLHECILQ-CGY---DTHLIVGNCIMTMYSSCGRIDN 359

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A    ++  ++  + +W  + S  A  G       +   +L  E   P  +  +S I   
Sbjct: 360 AAAFFSTM-VERDAISWNTIISGHAQAGFCDEAVHLFRRMLA-EGITPDKFTFISIIDGT 417

Query: 704 AGLWEEAANIRELLKRTGV 722
           A + +EA  + EL+  +GV
Sbjct: 418 ARM-QEAKILSELMVESGV 435


>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
 gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
          Length = 930

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 363/755 (48%), Gaps = 85/755 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           NI +   SR+G Y D  HLF  + +S   +  P   +++  L  CA LR    G  +H Y
Sbjct: 164 NILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGY 223

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRV---FSEIQNPDVYSWTTFLSACTKMGHV 139
            ++ GL+      N ++S+Y      +++      FS I   DV SW             
Sbjct: 224 VIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSW------------- 270

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                             N++I G +ENG  +  + LF +M   +   +  + A+VL  C
Sbjct: 271 ------------------NSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC 312

Query: 200 DAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              L+E+GR    ++H  V + G    +SV NAL+  Y     +     +F  +K  + D
Sbjct: 313 S--LVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSK--MGD 368

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
            +++N ++ G         AL  F+ +L A + P  ++ +S+++AC      RVG +VH 
Sbjct: 369 IVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHG 428

Query: 313 QAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +       TS+ NA ++ YS C + D A   F  +Q KD VSWN ++S  A      
Sbjct: 429 YIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHI 488

Query: 372 SAILAYL-EMQSVGIRPDEFTFGSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALI 428
                 L EM     + D  T  +++  S F  I+MV+  H +    G   +  V+NA++
Sbjct: 489 EQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAIL 548

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG---------------------- 466
            AYAK   +  A  +F +++ RNI+T NT+I+ +L N                       
Sbjct: 549 DAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNL 608

Query: 467 ---------FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
                       Q    F +L    L PD  +++  LS+C  +SS++  KQ HGY+L+ +
Sbjct: 609 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 668

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L   + L  A++  Y+KCG++  +  +F + + KD + + A+I AYA HG  ++AV  F 
Sbjct: 669 L-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 727

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M  +  IKPD    TA+LSACSHAGLVD G +IF S+   YG  P E+H +CM+DLL R
Sbjct: 728 KMLTLD-IKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLAR 786

Query: 638 AGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           +G L +A    ++       ++ W +L  AC  HG +++G++ A  L   E +    YV+
Sbjct: 787 SGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVI 846

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SNI+AA   WE   ++R+L+K   + K  GCSWI
Sbjct: 847 MSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWI 881



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/442 (30%), Positives = 232/442 (52%), Gaps = 24/442 (5%)

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIG-IGLFREMHKLDVRRDNYSFA------SVL 196
           +VFD +P  D  +  + +      G +  G   L R M    +R +  + A      S L
Sbjct: 44  DVFDAVPALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSAL 103

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
             C  G    GR LH L  K G++    V  A++ MY   G++ DA  VF+E      D 
Sbjct: 104 PDCRGGA-ALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMS--CSDA 160

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLR---PSELTFVSVMSACLCPRV---GYQV 310
           +  N+++   +  G   +    FR ML + +    P+ +T   V+  C   RV   G  +
Sbjct: 161 VCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSI 220

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCG---KIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           H   +K+G E  T   NA ++MY+ CG    +D+A + F+ +  KD+VSWN++I+ Y++ 
Sbjct: 221 HGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSEN 280

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQV 423
            L   A+  + +M S    P+  T  ++L     +E      + IH FV  +G+  +I V
Sbjct: 281 GLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISV 340

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           SNAL++ Y+K   ++    IF +    +I+TWNT+I G+++N +P + L+ F  LL + +
Sbjct: 341 SNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGM 400

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSL 542
            PD  +L   L++CA++ +LR G ++HGY+ ++  L+ + SL NA+++ Y++C   D + 
Sbjct: 401 APDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAF 460

Query: 543 RVFNMMIEKDTISWNALISAYA 564
           R F  +  KD++SWNA++SA A
Sbjct: 461 RSFITIQNKDSVSWNAILSACA 482



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 261/606 (43%), Gaps = 98/606 (16%)

Query: 53  LKPDIYSLSTTLAACANLRN----AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           L+P+  +L+  + + + L +    AA G  LH  A++ G      VA  ++ +Y      
Sbjct: 86  LRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYG----- 140

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
                                     ++G +  A  VFD+M   D    N +IT  +  G
Sbjct: 141 --------------------------RIGSLADAHTVFDEMSCSDAVCRNILITASSRAG 174

Query: 169 -YEDIGIGLFREMHKLDVRRD---NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV 223
            Y D+   LFR M    V        + A VL VC    +L  GR +H  V K+G     
Sbjct: 175 LYNDV-FHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDT 233

Query: 224 SVVNALITMYFNCGNVV---DACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIR 278
              NAL++MY  CG  +   DA   F      +C  D +S+N ++ G +  G  EEAL  
Sbjct: 234 LSGNALVSMYAKCGGSIAMDDAHLAFST----ICCKDVVSWNSIIAGYSENGLFEEALAL 289

Query: 279 FRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           F  M+     P+  T  +V+  C         G ++H   ++ G E   SVSNA +  YS
Sbjct: 290 FGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
              ++     IF   +  DIV+WNT+I+ Y        A+  +  +   G+ PD  +  S
Sbjct: 350 KVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLIS 409

Query: 395 LL---ASSGFIEMVEMIHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           LL   A  G + +   +H ++F +  ++    + NAL+S Y++ +R   A++ F  +  +
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNK 469

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL-SVALSSCARISS---LRHG 506
           + ++WN +++    +   ++  Q F   L+ E+  D     SV + +  R+S+   ++  
Sbjct: 470 DSVSWNAILSACANSEHHIE--QFFR--LLGEMWHDVTQWDSVTILNIIRMSTFCGIKMV 525

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDL----------------------DCSLR- 543
           ++ HGY L+       S+ NA++  YAKCG L                       C L+ 
Sbjct: 526 QESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKN 585

Query: 544 --------VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
                    FN M EKD  +WN +   YAQ+    +A   F  +Q  G + PD  + T +
Sbjct: 586 NCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEG-LNPDTISITNI 644

Query: 596 LSACSH 601
           LSAC H
Sbjct: 645 LSACIH 650


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 204/674 (30%), Positives = 345/674 (51%), Gaps = 53/674 (7%)

Query: 13  NSNTSKELLLKL------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAA 66
            +N  + +L KL      N  +  L +   + +A+  F  +         + + +  ++A
Sbjct: 13  TNNVKETVLSKLRAEQSSNEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISA 72

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVA--NTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           C+ LR+   G ++H + L++  K++P +   N IL++Y                      
Sbjct: 73  CSYLRSLEHGRKIHDHMLKS--KSHPDLTLQNHILNMY---------------------- 108

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
                     K G +  A +VFD MP+R++  + ++I G ++NG     +  + +M +  
Sbjct: 109 ---------GKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSG 159

Query: 185 VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  D ++F S++  C + G +  GRQLH+ V KS F   +   NALI+MY     ++DA 
Sbjct: 160 VMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDAL 219

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSAC- 301
            VF        D IS+  M+ G + +G   EAL  F++ML   +  P+E  F SV SAC 
Sbjct: 220 DVFSRMATR--DLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS 277

Query: 302 --LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             L P  G Q+H  ++K G         +   MY+ CG +  A ++F ++   D+V+WN 
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNA 337

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFING 416
           +I+ +A     + AI  + +M+  G+ PDE T  SLL A +   E+ +   +H ++   G
Sbjct: 338 IIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG 397

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHF 475
           +  ++ V N L++ YAK   ++ A   F  M    ++++WN ++   + +    +     
Sbjct: 398 LDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLL 457

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             + +S+ RPD  TL+  L + A   S+  G Q+H Y LK  L   +S+ N +I LYAKC
Sbjct: 458 KLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDISVTNGLIDLYAKC 517

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G L  + ++F+ +I  D +SW++LI  YAQ G G+EA+  FK M+ +  +KP+  TF  V
Sbjct: 518 GSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD-VKPNHVTFVGV 576

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L+ACSH GLV++G +++ +M  ++G +P  +H SCM+DLL RAG L+EAE  I+      
Sbjct: 577 LTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDP 636

Query: 656 RSDNWWALFSACAA 669
               W  L +AC +
Sbjct: 637 DIVVWKTLLAACKS 650



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 218/421 (51%), Gaps = 15/421 (3%)

Query: 293 TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T+  ++SAC   R    G ++H   +KS      ++ N  + MY  CG + +A  +F  +
Sbjct: 65  TYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAM 124

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
            E+++VSW ++I+ Y+Q   G +A+  Y +M   G+ PD+FTFGS++   +S G I +  
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +HA V  +    +I   NALIS Y K+  I  A  +F  M+ R++I+W ++I GF   G
Sbjct: 185 QLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLG 244

Query: 467 FPVQGLQHFSELLMSELR-PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
           + ++ L +F E+L   +  P+E+      S+C+ +    +G+Q+HG  +K  L   +  G
Sbjct: 245 YELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAG 304

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            ++  +YAKCG L C+  VF  +   D ++WNA+I+ +A  G+ KEA++ F  M+  G I
Sbjct: 305 CSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLI 364

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            PD+ T  ++L AC+    +  G ++    +N  G        + +L +  +   L +A 
Sbjct: 365 -PDEITVRSLLCACTSPSELYQGMQV-HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAI 422

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL--LLEREQDKPSVYVLLSNIYAA 703
                    A   +W A+ +AC  H        + GL  L+   Q +P  Y+ L+N+  A
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMHHDQ---AEEVFGLLKLMCISQHRPD-YITLTNVLGA 478

Query: 704 A 704
           +
Sbjct: 479 S 479


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 181/563 (32%), Positives = 301/563 (53%), Gaps = 10/563 (1%)

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
             +EM   DV    +S+  +   C     L  GR +H  + ++  +   S+ N L+ MY 
Sbjct: 74  FLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYC 133

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           +CG+ +D  KVF+E    + + +S+ +++   A  G +E+A+  F DM  + +RP+   +
Sbjct: 134 DCGSXIDVQKVFDEM--LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVY 191

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +S++ +CL P    +G Q+H+  +++   A  +V  A   MY  CG ++ A ++F  +  
Sbjct: 192 MSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDA 251

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
           ++ V+W  ++  Y Q      A+  +  M   G+  DEF F  +L     +E   M + I
Sbjct: 252 QNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQI 311

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+ +   G  + + V   L+  Y K   I+ AY+ F  +S  N ++W+ LI+GF  +G  
Sbjct: 312 HSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL 371

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
              ++ F+ L    +  + +  +    +CA  ++L  G Q HG  +K  L+S +   +AM
Sbjct: 372 EDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAM 431

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +T+Y+KCG LD + R F  + E D ++W A+IS YA HG   EA+  F+ MQ  G ++P+
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYG-VRPN 490

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             TF AVL+ACSH+GLV +  +   SM  DYG  P  DH  CM+D   RAG L EA  +I
Sbjct: 491 AVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELI 550

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
           N    +  + +W +L   C AH +L+LG+I A  L   +    + Y+LL N+Y+A G WE
Sbjct: 551 NRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWE 610

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           EA ++R+L+    + K+  CSWI
Sbjct: 611 EAGHVRKLMAERELKKEVSCSWI 633



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/551 (23%), Positives = 243/551 (44%), Gaps = 43/551 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L +LS+ G  ++A H F++      +    +S      AC  LR+ A G  +H    
Sbjct: 56  NLHLVSLSKQGKLKEA-HDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLR 114

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R        + N +L +Y +    + V++VF E+   ++ SW   +SA  K G ++ A  
Sbjct: 115 RTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKA-- 172

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                                        I LF +M    +R ++  + S+L  C     
Sbjct: 173 -----------------------------IRLFSDMQASGIRPNSAVYMSLLQSCLGPSF 203

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+Q+HS V ++  +  ++V  A+  MY  CG +  A  VF+       + +++  +M
Sbjct: 204 LELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQ--NAVTWTGLM 261

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G     ++E AL  F  M +  +   E  F  V+  C       +G Q+H+  +K G E
Sbjct: 262 VGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXE 321

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV    +  Y  CG I+ A   F R+ E + VSW+ +IS ++Q       I  +  +
Sbjct: 322 SEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSL 381

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +S G+  + F + S+    A+   + M    H      G+++ +   +A+++ Y+K  R+
Sbjct: 382 RSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRL 441

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A + F ++   + + W  +I+G+  +G   + L  F  +    +RP+  T    L++C
Sbjct: 442 DYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTAC 501

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTIS 555
           +    +   KQ  G + ++  +   +   + MI  Y++ G L  +L + N M  E D +S
Sbjct: 502 SHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMS 561

Query: 556 WNALISAYAQH 566
           W +L+     H
Sbjct: 562 WKSLLGGCWAH 572


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 171/474 (36%), Positives = 275/474 (58%), Gaps = 12/474 (2%)

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
           L S  +++EAL+   +M +  L      + SV++ C+     R G +VHA  +K+ +E  
Sbjct: 455 LCSNRQLKEALL---EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPP 511

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             +    I +Y+ C  + +A  +   + E+++VSW  MIS Y+QR     A+  ++EM  
Sbjct: 512 VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLM 571

Query: 383 VGIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
            G  P+EFTF ++L    +SSGF ++   IH+ V      ++I V ++L+  YAK  +I 
Sbjct: 572 SGTAPNEFTFATVLTSCTSSSGF-QLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 630

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +A ++F  +  R++++   +I+G+   G   + L  F  L    +R +  T +  L++ +
Sbjct: 631 EARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALS 690

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +++L HG+Q+H +VL+  L   + L N++I +Y+KCG L  S R+F+ M E+  ISWNA
Sbjct: 691 GLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNA 750

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           ++  Y++HG G+EAV  FK M++  ++KPD  TF AVLS CSH G+ D G  IF  MVN 
Sbjct: 751 MLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQ 810

Query: 619 Y-GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
             GF P  +H  C++DL GRAG ++EA   I     +  +  W +L  AC  H N+ +G 
Sbjct: 811 KDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGE 870

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +A  LLE E +    YV+LSN+YA+AG W++   +REL+K   VIK+PG SWI
Sbjct: 871 FVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWI 924



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 180/351 (51%), Gaps = 15/351 (4%)

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P VY  T  +    K   +  A  V D+MP+R++  + AMI+G ++ GY    + LF EM
Sbjct: 510 PPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEM 569

Query: 181 HKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                  + ++FA+VL+ C +    + GRQ+HSLV K+ F   + V ++L+ MY   G +
Sbjct: 570 LMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKI 629

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A +VF+       D +S   ++ G A +G  EEAL  FR +    +R + +T+ SV++
Sbjct: 630 CEARRVFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLT 687

Query: 300 A---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           A         G QVH+  +++    Y  + N+ I MYS CG +  +  IF  + E+ ++S
Sbjct: 688 ALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVIS 747

Query: 357 WNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFVF 413
           WN M+  Y++  LGR A+ L  L  +   ++PD  TF ++L+  S G +E   +   +  
Sbjct: 748 WNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEM 807

Query: 414 IN---GIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLI 459
           +N   G    I+    ++  + +  R+++A++    M   P   I W +L+
Sbjct: 808 VNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI-WGSLL 857



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 198/434 (45%), Gaps = 53/434 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S+ G+  +ALHLFV++  S    P+ ++ +T L +C +      G Q+H+  ++  
Sbjct: 550 ISGYSQRGYASEALHLFVEMLMS-GTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +++  V +++L +Y  A  +   +RVF  +   DV S       CT             
Sbjct: 609 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS-------CT------------- 648

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
                      A+I+G  + G ++  + LFR + +  +R +  ++ASVL+   +GL  L+
Sbjct: 649 -----------AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL-SGLAALD 696

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GRQ+HS V ++     V + N+LI MY  CG++  + ++F+         IS+N M+ G
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTV--ISWNAMLVG 754

Query: 266 LASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACL---CPRVGYQVHAQAM--KSGF 319
            +  G   EA+  F+ M   + ++P  +TF++V+S C        G ++  + +  K GF
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAIL 375
           E         + ++   G+++EA     ++  E     W +++     +   ++G     
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVAR 874

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISA 430
             LE++S     +     +L AS+G  + V  +   +    +I       I++   L + 
Sbjct: 875 RLLEIESENA-GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTF 933

Query: 431 YAKNERIKQAYQIF 444
           +A +    +  ++F
Sbjct: 934 HASDRSHPRKEEVF 947


>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
 gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
          Length = 701

 Score =  322 bits (826), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 220/737 (29%), Positives = 355/737 (48%), Gaps = 88/737 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           + + N  L  L+RSG    A  LF  +      + +  + ++ L+A A       G    
Sbjct: 18  VFRSNQELTRLARSGQLAAARRLFDSMP-----RRNTVTYNSMLSALAR-----HGRIDE 67

Query: 81  AYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           A AL  G+ +   V+ N +++   +   +   + +F  + + D +SWT  +S   + G +
Sbjct: 68  ARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGEL 127

Query: 140 DYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-- 196
           + A +V D+MP D+    YNAMI+G  +NG  D  + L REM   D+   N + A +   
Sbjct: 128 ELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQS 187

Query: 197 -----------SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVN-----------ALITMYF 234
                       + +  ++ +   L   V         S               L+  Y 
Sbjct: 188 GQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYC 247

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE--L 292
             G + DA  +F+       + ++ NVM+DG   + R+EEA   F +M      P +  +
Sbjct: 248 RAGRISDARDLFDRMPER--NVVACNVMLDGYVRLSRLEEACKLFDEM------PGKNSI 299

Query: 293 TFVSVMSACLCPRVGYQVHAQAM--KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           ++ +++S     R G    A+ +  K  F    +   A +  Y     +++A  IF  ++
Sbjct: 300 SWTTIISGL--ARAGKLQEAKDLLDKMSFNC-VAAKTALMHGYLQRNMVNDARQIFDGME 356

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
             D V WNTMIS Y QR +   A+L +  M      P++ T                   
Sbjct: 357 VHDTVCWNTMISGYVQRGMLEEAMLLFQRM------PNKDTVSW---------------- 394

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                         N +I+ YA+  ++++A  IF  MS +N ++WN++I+GF+ NG  V 
Sbjct: 395 --------------NTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVD 440

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
              HF  +     R D  T +  L +CA +++L  G+Q+H  ++++  I+ +   NA+I+
Sbjct: 441 AFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALIS 500

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
            YAKCG +  + ++F+ M+ KD +SWNAL+  YA +G+G EA+S F+ M+  G ++PD+ 
Sbjct: 501 TYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANG-VRPDEV 559

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +LSACS AGL+D+G   F+SM  +Y   P  +H +CM DLLGRAG L+EA  ++  
Sbjct: 560 TFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQG 619

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             IQ  +  W AL  AC  + N  L R+ A  L E E  + S YVLLSNI A AG W+EA
Sbjct: 620 MQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEA 679

Query: 711 ANIRELLKRTGVIKQPG 727
              R  +K  G  K PG
Sbjct: 680 EKARASIKEKGANKPPG 696


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 208/721 (28%), Positives = 354/721 (49%), Gaps = 44/721 (6%)

Query: 23  KLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           K+N  +   +  G ++DA+ +++          +       + A   L +   G Q+H +
Sbjct: 5   KVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGH 64

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            L+ G      V N++L +Y                       W        K G    A
Sbjct: 65  LLKFGFLQDIFVKNSLLGMY-----------------------W--------KCGAGGNA 93

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL--DVRRDNYSFASVLSVCD 200
            ++F++M +RD   +N MI+G  ++G     + +FR M K       +  +  + LS C 
Sbjct: 94  VDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCA 153

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG--YVCDHI 257
           +   L  G ++H  + K G      +V+ALI MY  CG++ +A  VFE  +    V  ++
Sbjct: 154 SIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNM 213

Query: 258 S-YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           + +NVM+ G  S   +  AL  F +ML   + P   T V V+  C   L   VG Q+H  
Sbjct: 214 AVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGL 273

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +  G +    V  A + MY  CG  + +  IF R Q  ++V W +++   AQ      A
Sbjct: 274 ILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEA 333

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           +  + E       PD     + L +  F+ +      IH F    G  +++ V  AL+  
Sbjct: 334 LEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDF 393

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   ++ A Q+F+ +S R++++WN LI+GF  N    + L+ F ++   +++P+  T+
Sbjct: 394 YGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTM 453

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           +  LS C  +S +   K++H Y+L++   +   + N++I+ YAKCGD+  S  VF  +  
Sbjct: 454 ACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPV 513

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           ++ ++WN+++  +  HG   E  + F+ M++   IKPD  TFT++LS+CSH+G VD G +
Sbjct: 514 RNEVTWNSILLGFGMHGRTDEMFATFEKMKE-ANIKPDHGTFTSLLSSCSHSGKVDAGWK 572

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            F+SM+ DY   P  +  +CM+DLLGRAG L++A  +I S         W +L ++C  H
Sbjct: 573 YFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNH 632

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           GN +L  ++A  + E +       VLL+N+Y  +G   E   +R  +K+ G+ KQPGCSW
Sbjct: 633 GNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSW 692

Query: 731 I 731
           I
Sbjct: 693 I 693



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/464 (29%), Positives = 235/464 (50%), Gaps = 18/464 (3%)

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQL 210
           D+   N MI  CTE+G+ +  I ++ +  +     + + F   L     GL +   G+Q+
Sbjct: 2   DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQI 61

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  + K GF   + V N+L+ MY+ CG   +A  +FE  +    D +S+N M+ G    G
Sbjct: 62  HGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEER--DSVSWNTMISGFCQSG 119

Query: 271 RVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
              ++L+ FR M+        + +  ++ +S+C    C   G ++H   +K G ++   +
Sbjct: 120 DYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFL 179

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVS-----WNTMISTYAQRNLGRSAILAYLEM 380
            +A I MY  CG I  A  +F R+++ ++V      WN MI  Y        A+  ++EM
Sbjct: 180 VSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEM 239

Query: 381 QSVGIRPDEFTFGSLLAS-SGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
             +GI PD  T   +L   S  +++   + IH  +   G+  +++V  AL+  Y K    
Sbjct: 240 LELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDP 299

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + + QIF      N++ W +++     NG+P + L+ FSE ++    PD   L  AL +C
Sbjct: 300 ETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRAC 359

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           + +S    G  IHG+ +K    S + +G A++  Y KCGD++ + +VF  +  +D +SWN
Sbjct: 360 SFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWN 419

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ALIS +AQ+    EA+  F+ MQ   +IKP+  T   +LS C+H
Sbjct: 420 ALISGFAQNKCADEALKAFRDMQS-KQIKPNTVTMACILSVCTH 462



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 8/178 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  +++    +AL  F  + S  ++KP+  +++  L+ C +L       ++H
Sbjct: 415 LVSWNALISGFAQNKCADEALKAFRDMQSK-QIKPNTVTMACILSVCTHLSVMILCKEVH 473

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y LR   +    V N+++S Y    D+ S + VF ++   +  +W + L      G  D
Sbjct: 474 CYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTD 533

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
                F+KM + ++      + ++++ C+ +G  D G   F  M   + L+ R + Y+
Sbjct: 534 EMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYT 591


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 195/647 (30%), Positives = 335/647 (51%), Gaps = 15/647 (2%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           N  L L+K +  +  + +  ++I       D+   T      + +G + YA ++F  +  
Sbjct: 21  NNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR 80

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVCDAGLLE--FGR 208
            D+ ++N ++ G + N      + +F  + K  D++ ++ ++A  +S   +G  +   G 
Sbjct: 81  PDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAA-SGFRDDRAGC 139

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H      G    + + + ++ MYF    V DA KVF+       D I +N M+ G   
Sbjct: 140 VIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRK 197

Query: 269 VGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS 324
                E++  FRD++  S  R    T + ++ A       R+G Q+H+ A K+G  ++  
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V    I++YS CGKI  A  +F   +  DIV++N MI  Y        ++  + E+   G
Sbjct: 258 VLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
            +    T  SL+  SG + ++  IH +   +  +++  VS AL + Y+K   I+ A ++F
Sbjct: 318 AKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLF 377

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                +++ +WN +I+G+  NG     +  F E+  SE  P+  T++  LS+CA++ +L 
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALS 437

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK +H  V   +  S + +  A+I +YAKCG +  + R+F+ M +K+ ++WN +IS Y 
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYG 497

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG G+EA++ F  M + G I P   TF  VL ACSHAGLV +G  IF+SM++ YGF P+
Sbjct: 498 LHGHGQEALTIFSEMLNSG-IAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H +C++D+LGRAG+L  A + I +  IQ     W  L  AC  H +  L R ++  L 
Sbjct: 557 VKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLF 616

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E + D    +VLLSNI++A   + +AA +R+  K+  + K PG + I
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 264/585 (45%), Gaps = 51/585 (8%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N+ +   S +     +L +F  +  S  LKP+  + +  ++A +  R+   G  +H  A
Sbjct: 86  FNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHGQA 145

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  G  +   + + I+ +Y     +   ++VF  +   D   W T +S   K      + 
Sbjct: 146 IVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
           +VF     RDL     +   CT                    R D  +   +L +V +  
Sbjct: 206 QVF-----RDL-----INESCT--------------------RLDTTTLLDILPAVAELQ 235

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G Q+HSL TK+G      V+   I++Y  CG +  A  +F E +    D ++YN M
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRR--PDIVAYNAM 293

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           + G  S G  E +L  F++++++  +    T VS++       + Y +H  ++KS F ++
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSH 353

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           TSVS A  T+YS   +I+ A  +F    EK + SWN MIS Y Q  L   AI  + EMQ+
Sbjct: 354 TSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQN 413

Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
               P+  T   +L   A  G + + + +H  V      ++I VS ALI  YAK   I +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A ++F  M  +N +TWNT+I+G+ L+G   + L  FSE+L S + P   T    L +C+ 
Sbjct: 474 ARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSH 533

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGDLDCSLRVFNMM-IEKD 552
              ++ G +I      N++I +     +      ++ +  + G L  +L+    M I+  
Sbjct: 534 AGLVKEGDEIF-----NSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPG 588

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              W  L+ A   H +   A +  + + +   + PD   +  +LS
Sbjct: 589 PSVWETLLGACRIHKDTNLARTVSEKLFE---LDPDNVGYHVLLS 630


>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
          Length = 1030

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 227/755 (30%), Positives = 363/755 (48%), Gaps = 85/755 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           NI +   SR+G Y D  HLF  + +S   +  P   +++  L  CA LR    G  +H Y
Sbjct: 164 NILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGY 223

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRV---FSEIQNPDVYSWTTFLSACTKMGHV 139
            ++ GL+      N ++S+Y      +++      FS I   DV SW             
Sbjct: 224 VIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSW------------- 270

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                             N++I G +ENG  +  + LF +M   +   +  + A+VL  C
Sbjct: 271 ------------------NSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFC 312

Query: 200 DAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              L+E+GR    ++H  V + G    +SV NAL+  Y     +     +F  +K  + D
Sbjct: 313 --SLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVCEMRAVESIFRSSK--MGD 368

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
            +++N ++ G         AL  F+ +L A + P  ++ +S+++AC      RVG +VH 
Sbjct: 369 IVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHG 428

Query: 313 QAMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +       TS+ NA ++ YS C + D A   F  +Q KD VSWN ++S  A      
Sbjct: 429 YIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNKDSVSWNAILSACANSEHHI 488

Query: 372 SAILAYL-EMQSVGIRPDEFTFGSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALI 428
                 L EM     + D  T  +++  S F  I+MV+  H +    G   +  V+NA++
Sbjct: 489 EQFFRLLGEMWHDVTQWDSVTILNIIRMSTFCGIKMVQESHGYSLRVGYTGDSSVANAIL 548

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG---------------------- 466
            AYAK   +  A  +F +++ RNI+T NT+I+ +L N                       
Sbjct: 549 DAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTTWNL 608

Query: 467 ---------FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
                       Q    F +L    L PD  +++  LS+C  +SS++  KQ HGY+L+ +
Sbjct: 609 MSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRAS 668

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L   + L  A++  Y+KCG++  +  +F + + KD + + A+I AYA HG  ++AV  F 
Sbjct: 669 L-EDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAEKAVELFS 727

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M  +  IKPD    TA+LSACSHAGLVD G +IF S+   YG  P E+H +CM+DLL R
Sbjct: 728 KMLTLD-IKPDHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLAR 786

Query: 638 AGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           +G L +A    ++       ++ W +L  AC  HG +++G++ A  L   E +    YV+
Sbjct: 787 SGRLQDAYSFALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVI 846

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SNI+AA   WE   ++R+L+K   + K  GCSWI
Sbjct: 847 MSNIFAADDKWESVEHVRKLMKSKDMKKPAGCSWI 881



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/537 (28%), Positives = 264/537 (49%), Gaps = 44/537 (8%)

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIG-IGLFREMHKLDVRRDNYSFA------SVL 196
           +VFD +P  D  +  + +      G +  G   L R M    +R +  + A      S L
Sbjct: 44  DVFDAVPALDDRMRCSALLRERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSAL 103

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
             C  G    GR LH L  K G++    V  A++ MY   G++ DA  VF+E      D 
Sbjct: 104 PDCRGGA-ALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMS--CSDA 160

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLR---PSELTFVSVMSACLCPRV---GYQV 310
           +  N+++   +  G   +    FR ML + +    P+ +T   V+  C   RV   G  +
Sbjct: 161 VCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSI 220

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCG---KIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           H   +K+G E  T   NA ++MY+ CG    +D+A + F+ +  KD+VSWN++I+ Y++ 
Sbjct: 221 HGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSEN 280

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQV 423
            L   A+  + +M S    P+  T  ++L     +E      + IH FV  +G+  +I V
Sbjct: 281 GLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISV 340

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           SNAL++ Y+K   ++    IF +    +I+TWNT+I G+++N +P + L+ F  LL + +
Sbjct: 341 SNALMAHYSKVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGM 400

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSL 542
            PD  +L   L++CA++ +LR G ++HGY+ ++  L+ + SL NA+++ Y++C   D + 
Sbjct: 401 APDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAF 460

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACS 600
           R F  +  KD++SWNA++SA A      E    F+ + ++     + D  T   ++   +
Sbjct: 461 RSFITIQNKDSVSWNAILSACANSEHHIEQF--FRLLGEMWHDVTQWDSVTILNIIRMST 518

Query: 601 HAGLVDDGTRIFDSMVND-------YGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
             G+          MV +        G+       + +LD   + GYL +AE +  S
Sbjct: 519 FCGI---------KMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRS 566



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 159/606 (26%), Positives = 261/606 (43%), Gaps = 98/606 (16%)

Query: 53  LKPDIYSLSTTLAACANLRN----AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           L+P+  +L+  + + + L +    AA G  LH  A++ G      VA  ++ +Y      
Sbjct: 86  LRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYG----- 140

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
                                     ++G +  A  VFD+M   D    N +IT  +  G
Sbjct: 141 --------------------------RIGSLADAHTVFDEMSCSDAVCRNILITASSRAG 174

Query: 169 -YEDIGIGLFREMHKLDVRRD---NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLV 223
            Y D+   LFR M    V        + A VL VC    +L  GR +H  V K+G     
Sbjct: 175 LYNDV-FHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDT 233

Query: 224 SVVNALITMYFNCGNVV---DACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIR 278
              NAL++MY  CG  +   DA   F      +C  D +S+N ++ G +  G  EEAL  
Sbjct: 234 LSGNALVSMYAKCGGSIAMDDAHLAFST----ICCKDVVSWNSIIAGYSENGLFEEALAL 289

Query: 279 FRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           F  M+     P+  T  +V+  C         G ++H   ++ G E   SVSNA +  YS
Sbjct: 290 FGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYS 349

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
              ++     IF   +  DIV+WNT+I+ Y        A+  +  +   G+ PD  +  S
Sbjct: 350 KVCEMRAVESIFRSSKMGDIVTWNTVIAGYVMNRYPSRALKLFQGLLFAGMAPDSVSLIS 409

Query: 395 LL---ASSGFIEMVEMIHAFVFING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           LL   A  G + +   +H ++F +  ++    + NAL+S Y++ +R   A++ F  +  +
Sbjct: 410 LLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFRSFITIQNK 469

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL-SVALSSCARISS---LRHG 506
           + ++WN +++    +   ++  Q F   L+ E+  D     SV + +  R+S+   ++  
Sbjct: 470 DSVSWNAILSACANSEHHIE--QFFR--LLGEMWHDVTQWDSVTILNIIRMSTFCGIKMV 525

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDL----------------------DCSLR- 543
           ++ HGY L+       S+ NA++  YAKCG L                       C L+ 
Sbjct: 526 QESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKN 585

Query: 544 --------VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
                    FN M EKD  +WN +   YAQ+    +A   F  +Q  G + PD  + T +
Sbjct: 586 NCVEDAEMTFNHMAEKDLTTWNLMSRLYAQNDLCDQAFCLFHQLQSEG-LNPDTISITNI 644

Query: 596 LSACSH 601
           LSAC H
Sbjct: 645 LSACIH 650


>gi|302756495|ref|XP_002961671.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
 gi|300170330|gb|EFJ36931.1| hypothetical protein SELMODRAFT_264 [Selaginella moellendorffii]
          Length = 934

 Score =  322 bits (825), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 216/688 (31%), Positives = 340/688 (49%), Gaps = 63/688 (9%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
            Y+++L LF ++      +P+  +L + L+AC   +    G  +H   + AG +    V 
Sbjct: 288 EYEESLRLFRKMQLEGN-RPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDLIVG 346

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N I+S+Y                                K G ++ A +VF ++P R + 
Sbjct: 347 NAIVSMYG-------------------------------KCGSLEDAWDVFHRVPRRSVV 375

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
             N M+  C   G     + LFR M    +  DN +F S L  C     L  G   H+ +
Sbjct: 376 TCNGMMGACAVQGDSSGALKLFRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARM 435

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            + G    + V NAL+ MY  CG V  A  VFEE      D  ++N M+  LA V   EE
Sbjct: 436 LECGLELDIFVANALVNMYGKCGKVEAAEHVFEELPEQ--DVRTWNAMI--LAYVQNEEE 491

Query: 275 --ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
              L+ FR M+ +  +P E+TF   ++AC  PR    VH+   ++G  + T V NA + M
Sbjct: 492 RSGLLVFRHMMQSGYKPDEVTFAITLNACYHPRFLRDVHSLISETGI-SNTVVQNALVVM 550

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR----------NLGR--SAILAYLEM 380
           Y   G ++E   +F +L ++ I SWN MI++ AQ             GR   A+  +  M
Sbjct: 551 YGRFGLLEEGYQVFEKLDQESITSWNVMIASCAQTCWNSVIFAHVQSGRDSEALKMFWRM 610

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNER 436
           Q  G+ PD+ +F +++ +   + M E     + A +  + +   + + NALIS Y +   
Sbjct: 611 QQAGVWPDKTSFVAVVKAYSNVGMTEPEIDWLRAVIANSDVEDGVPIGNALISMYGRCGS 670

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             +A  +F +M+ R+ +TWNT+++           +Q F ++L     PD+ T+   L+ 
Sbjct: 671 FGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNV 730

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA + +L+ GK I  ++    L +   +GNA++ +YAKCG  D + R+F++M  +D +SW
Sbjct: 731 CASLPALQEGKAICVWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRDAVSW 790

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NALI AY  +  G+ A   F+AMQ  G   PD  TFT +LS CSH GL+ +  + F  M 
Sbjct: 791 NALIGAYGSYSRGRYAFQIFQAMQLEGS-TPDAVTFTTILSVCSHGGLLGEAVKWFRWMR 849

Query: 617 NDYGFIPAED-HLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHGNL 673
            DY ++ AE  H  C++DLLGR G + EAE V  ++ + A +D   W  L SAC  HG  
Sbjct: 850 EDY-YVEAETGHYGCIVDLLGRLGRVPEAEEV--AEKMPAGTDPIVWTTLLSACQVHGET 906

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIY 701
           + G+  A  L+E + +  S YV+LS IY
Sbjct: 907 QRGKRAAERLVELDPEVTSAYVVLSTIY 934



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 164/614 (26%), Positives = 290/614 (47%), Gaps = 51/614 (8%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C+  ++ A G Q+HA   R+     P V N ++ +Y     L+   +VF ++    V
Sbjct: 12  LRQCSRSKDLARGRQIHASITRSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSV 71

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                                        +L  + A+I     NG   + I LF++M   
Sbjct: 72  V----------------------------NLVAWTALIAAYARNGQTKLAIRLFQQMQLE 103

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV--NALITMYFNCGNVV 240
               D  +  ++   C +   LE G+++H+ +     SC   VV  ++LITMY  CG++ 
Sbjct: 104 GNSPDRITLVTIFEACGNPENLEDGKKIHAYL-----SCNSDVVLGSSLITMYGKCGSLS 158

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +AC +F+  + +  + +++N +M       RVEEA+  + +ML     PS  TF++V++A
Sbjct: 159 EACLMFQSMEEW--NTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAA 216

Query: 301 C---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
                  R G  VH    ++G E    V  A + MY  CG + EA  +F R+   D++ W
Sbjct: 217 ISSLESLRHGKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRHDVILW 276

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           + +IS +        ++  + +MQ  G RP+  T  S+L++    + +E    IH  V  
Sbjct: 277 SAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVE 336

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G   ++ V NA++S Y K   ++ A+ +FH +  R+++T N ++    + G     L+ 
Sbjct: 337 AGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKL 396

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  ++   +  D  T   AL +C+  S L HG+  H  +L+  L   + + NA++ +Y K
Sbjct: 397 FRYMVHEGIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGK 456

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG ++ +  VF  + E+D  +WNA+I AY Q+ E +  +  F+ M   G  KPD+ TF  
Sbjct: 457 CGKVEAAEHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSG-YKPDEVTFAI 515

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
            L+AC H   + D      S++++ G I      + ++ + GR G L+E  +V      Q
Sbjct: 516 TLNACYHPRFLRD----VHSLISETG-ISNTVVQNALVVMYGRFGLLEEGYQVFEKLD-Q 569

Query: 655 ARSDNWWALFSACA 668
               +W  + ++CA
Sbjct: 570 ESITSWNVMIASCA 583



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 168/628 (26%), Positives = 295/628 (46%), Gaps = 77/628 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R+G  + A+ LF Q+       PD  +L T   AC N  N   G ++HAY     
Sbjct: 81  IAAYARNGQTKLAIRLFQQMQLEGN-SPDRITLVTIFEACGNPENLEDGKKIHAY----- 134

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                      LS                   N DV   ++ ++   K G +  AC +F 
Sbjct: 135 -----------LSC------------------NSDVVLGSSLITMYGKCGSLSEACLMFQ 165

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEF 206
            M + +   +N+++    ++   +  + L+ EM +        +F +VL ++     L  
Sbjct: 166 SMEEWNTVAWNSLMGAFIQHDRVEEAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRH 225

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +H  + ++G    V V  AL+ MY  CG+VV+A +VF+    +  D I ++ ++   
Sbjct: 226 GKLVHDTLAEAGHEDDVVVQTALVNMYGKCGSVVEAVEVFDRMPRH--DVILWSAVISAH 283

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
            +    EE+L  FR M +   RP+ +T VSV+SAC  P+    G  +H   +++G+E   
Sbjct: 284 VNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVVEAGYEGDL 343

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V NA ++MY  CG +++A  +F R+  + +V+ N M+   A +     A+  +  M   
Sbjct: 344 IVGNAIVSMYGKCGSLEDAWDVFHRVPRRSVVTCNGMMGACAVQGDSSGALKLFRYMVHE 403

Query: 384 GIRPDEFTF-GSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           GI  D  TF  +L A SG   +   E  HA +   G+  +I V+NAL++ Y K  +++ A
Sbjct: 404 GIEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIFVANALVNMYGKCGKVEAA 463

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  +  +++ TWN +I  ++ N     GL  F  ++ S  +PDE T ++ L++C   
Sbjct: 464 EHVFEELPEQDVRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHP 523

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             LR    +H  + +   IS   + NA++ +Y + G L+   +VF  + ++   SWN +I
Sbjct: 524 RFLR---DVHSLISETG-ISNTVVQNALVVMYGRFGLLEEGYQVFEKLDQESITSWNVMI 579

Query: 561 S------------AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL---- 604
           +            A+ Q G   EA+  F  MQ  G + PD+ +F AV+ A S+ G+    
Sbjct: 580 ASCAQTCWNSVIFAHVQSGRDSEALKMFWRMQQAG-VWPDKTSFVAVVKAYSNVGMTEPE 638

Query: 605 ------------VDDGTRIFDSMVNDYG 620
                       V+DG  I +++++ YG
Sbjct: 639 IDWLRAVIANSDVEDGVPIGNALISMYG 666



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 254/586 (43%), Gaps = 65/586 (11%)

Query: 35  GHYQDALHLF-VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           G    AL LF   +H    ++ D  +  + L AC+     + G   HA  L  GL+    
Sbjct: 388 GDSSGALKLFRYMVHEG--IEFDNITFLSALCACSGTSGLSHGEFFHARMLECGLELDIF 445

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           VAN ++++Y     + + + VF E+                               P++D
Sbjct: 446 VANALVNMYGKCGKVEAAEHVFEEL-------------------------------PEQD 474

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSL 213
           +  +NAMI    +N  E  G+ +FR M +   + D  +FA  L+ C      F R +HSL
Sbjct: 475 VRTWNAMILAYVQNEEERSGLLVFRHMMQSGYKPDEVTFAITLNACYHP--RFLRDVHSL 532

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV---- 269
           ++++G S  V V NAL+ MY   G + +  +VFE+         S+NVM+   A      
Sbjct: 533 ISETGISNTV-VQNALVVMYGRFGLLEEGYQVFEKLDQESI--TSWNVMIASCAQTCWNS 589

Query: 270 --------GRVEEALIRFRDMLVASLRPSELTFVSVMSA-----CLCPRVGYQVHAQAMK 316
                   GR  EAL  F  M  A + P + +FV+V+ A        P + + + A    
Sbjct: 590 VIFAHVQSGRDSEALKMFWRMQQAGVWPDKTSFVAVVKAYSNVGMTEPEIDW-LRAVIAN 648

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           S  E    + NA I+MY  CG   +A  +F  + E+D V+WNTM+S   Q   GR +I  
Sbjct: 649 SDVEDGVPIGNALISMYGRCGSFGKARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQL 708

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   G  PD+ T  ++L   AS   ++  + I  ++    +  N  + NA+++ YAK
Sbjct: 709 FRQMLQEGTPPDKVTILTVLNVCASLPALQEGKAICVWLDHTPLSANQMIGNAILNMYAK 768

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
                +A +IF  M  R+ ++WN LI  +          Q F  + +    PD  T +  
Sbjct: 769 CGSRDEARRIFSVMQGRDAVSWNALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTI 828

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLI-SKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-K 551
           LS C+    L    +   ++ ++  + ++      ++ L  + G +  +  V   M    
Sbjct: 829 LSVCSHGGLLGEAVKWFRWMREDYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGT 888

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           D I W  L+SA   HGE +      +A + +  + P+  +   VLS
Sbjct: 889 DPIVWTTLLSACQVHGETQRGK---RAAERLVELDPEVTSAYVVLS 931


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 170/485 (35%), Positives = 275/485 (56%), Gaps = 11/485 (2%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----GYQ 309
           D  +YN+M+ G        EA++ F++M   S++P E TF  ++   +C R+     G Q
Sbjct: 88  DSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILK--VCSRLQALSEGEQ 145

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA  MK GF ++  V N  I MY++CG+++ A  +F  + E+++ +WN+M + Y +   
Sbjct: 146 IHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGN 205

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNA 426
               +  + EM  + IR DE T  S+L + G +   E+ E I+ +V   G+  N  +  +
Sbjct: 206 WEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITS 265

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  YAK  ++  A ++F  M  R+++ W+ +I+G+       + L  F E+  + + P+
Sbjct: 266 LVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPN 325

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E T+   LSSCA + +L  GK +H ++ K  +   ++LG A++  YAKCG ++ S+ VF 
Sbjct: 326 EITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFG 385

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  K+ +SW  LI   A +G+GK+A+  F  M +   ++P+  TF  VLSACSHAGLVD
Sbjct: 386 KMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLE-KNVEPNDVTFIGVLSACSHAGLVD 444

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G  +F SM  D+G  P  +H  CM+D+LGRAG ++EA + I +  IQ  +  W  L ++
Sbjct: 445 EGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLAS 504

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ +G      L+  E      Y+LLSNIYA+ G WE+A  +R  +K  G+ K P
Sbjct: 505 CKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTP 564

Query: 727 GCSWI 731
           GCS I
Sbjct: 565 GCSLI 569



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 251/512 (49%), Gaps = 43/512 (8%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C  +R+    N++HA+ ++  L   P VA  +L   ++A  L+              
Sbjct: 31  LEQCKTIRDL---NEIHAHLIKTRLLLKPKVAENLL---ESAAILLPTS----------- 73

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                          +DYA  +F ++ + D P YN MI G T        I LF+EMH+ 
Sbjct: 74  ---------------MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHEN 118

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V+ D ++F  +L VC     L  G Q+H+L+ K GF     V N LI MY NCG V  A
Sbjct: 119 SVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVA 178

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
            +VF+E      +  ++N M  G    G  EE +  F +ML   +R  E+T VSV++AC 
Sbjct: 179 RRVFDEMSER--NVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACG 236

Query: 302 --LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                 +G  ++    + G +   ++  + + MY+ CG++D A  +F ++  +D+V+W+ 
Sbjct: 237 RLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSA 296

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFING 416
           MIS Y+Q +  R A+  + EMQ   I P+E T  S+L+S    G +E  + +H F+    
Sbjct: 297 MISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKR 356

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +   + +  AL+  YAK   ++ + ++F  M  +N+++W  LI G   NG   + L++F 
Sbjct: 357 MKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFY 416

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKC 535
            +L   + P++ T    LS+C+    +  G+ +   + ++  +  ++     M+ +  + 
Sbjct: 417 LMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRA 476

Query: 536 GDLDCSLR-VFNMMIEKDTISWNALISAYAQH 566
           G ++ + + + NM I+ + + W  L+++   H
Sbjct: 477 GLIEEAFQFIKNMPIQPNAVIWRTLLASCKVH 508



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 212/444 (47%), Gaps = 43/444 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI +   +      +A+ LF ++H +  ++PD ++    L  C+ L+  + G Q+HA  +
Sbjct: 93  NIMIRGFTLKQSPHEAILLFKEMHEN-SVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  ++  V NT++ +Y N  ++   +RVF E+   +V +W +  +  TK G+      
Sbjct: 152 KCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGN------ 205

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                   +E++ + LF EM +LD+R D  +  SVL+ C     
Sbjct: 206 ------------------------WEEV-VKLFHEMLELDIRFDEVTLVSVLTACGRLAD 240

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G  ++  V + G     +++ +L+ MY  CG V  A ++F++      D ++++ M+
Sbjct: 241 LELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR--DVVAWSAMI 298

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G +   R  EAL  F +M  A++ P+E+T VS++S+C        G  VH    K   +
Sbjct: 299 SGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMK 358

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              ++  A +  Y+ CG ++ +  +F ++  K+++SW  +I   A    G+ A+  +  M
Sbjct: 359 LTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLM 418

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFIN---GIITNIQVSNALISAYAKNER 436
               + P++ TF  +L++     +V E    FV ++   GI   I+    ++    +   
Sbjct: 419 LEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGL 478

Query: 437 IKQAYQIFHNMSPR-NIITWNTLI 459
           I++A+Q   NM  + N + W TL+
Sbjct: 479 IEEAFQFIKNMPIQPNAVIWRTLL 502



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 126/244 (51%), Gaps = 4/244 (1%)

Query: 408 IHAFVFINGIITNIQVSNALISAYA--KNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           IHA +    ++   +V+  L+ + A      +  A  IF  +   +   +N +I GF L 
Sbjct: 43  IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLK 102

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
             P + +  F E+  + ++PDE+T    L  C+R+ +L  G+QIH  ++K    S   + 
Sbjct: 103 QSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVK 162

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N +I +YA CG+++ + RVF+ M E++  +WN++ + Y + G  +E V  F  M ++  I
Sbjct: 163 NTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELD-I 221

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           + D+ T  +VL+AC     ++ G  I +  V + G       ++ ++D+  + G +D A 
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWI-NRYVEEKGLKGNPTLITSLVDMYAKCGQVDTAR 280

Query: 646 RVIN 649
           R+ +
Sbjct: 281 RLFD 284


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 204/717 (28%), Positives = 350/717 (48%), Gaps = 49/717 (6%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N ++ + S  G +   L  +  +  +H +  D Y+  + L AC+ L   + G  LH   
Sbjct: 29  VNATINHHSTQGAHHQVLATYASMLKTH-VPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L +GL    ++A+++++ Y                                K G  D A 
Sbjct: 88  LVSGLSLDAYIASSLINFY-------------------------------AKFGFADVAR 116

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD MP+R++  +  +I   +  G       LF EM +  ++  + +  S+L     G+
Sbjct: 117 KVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTVLSLL----FGV 172

Query: 204 LEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            E    + LH      GF   +++ N+++ +Y  CGN+  + K+F+       D +S+N 
Sbjct: 173 SELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHR--DLVSWNS 230

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           ++   A +G + E L+  + M +        TF SV+S        ++G  +H Q +++G
Sbjct: 231 LISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHGQILRAG 290

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F     V  + I +Y   GKID A  +F R  +KD+V W  MIS   Q      A+  + 
Sbjct: 291 FYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKALAVFR 350

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +M   G++P   T  S++   A  G   +   I  ++    +  ++   N+L++ YAK  
Sbjct: 351 QMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVTMYAKCG 410

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            + Q+  +F  M+ R++++WN ++ G+  NG+  + L  F+E+      PD  T+   L 
Sbjct: 411 HLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSITIVSLLQ 470

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            CA    L  GK IH +V++N L   + +  +++ +Y KCGDLD + R FN M   D +S
Sbjct: 471 GCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVS 530

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W+A+I  Y  HG+G+ A+  +    + G +KP+   F +VLS+CSH GLV+ G  I++SM
Sbjct: 531 WSAIIVGYGYHGKGEAALRFYSKFLESG-MKPNHVIFLSVLSSCSHNGLVEQGLNIYESM 589

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             D+G  P  +H +C++DLL RAG ++EA  V   +      D    +  AC A+GN  L
Sbjct: 590 TKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVLGIILDACRANGNNEL 649

Query: 676 GRIIAG-LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G  IA  +L+ R  D  + +V L++ YA+   WEE       ++  G+ K PG S+I
Sbjct: 650 GDTIANDILMLRPMDAGN-FVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWSFI 705



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 217/478 (45%), Gaps = 46/478 (9%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           S N  ++  ++ G   + L  +  ML   +     TF S++ AC    +   G  +H + 
Sbjct: 28  SVNATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRI 87

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           + SG      ++++ I  Y+  G  D A  +F  + E+++V W T+I  Y++      A 
Sbjct: 88  LVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAF 147

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             + EM+  GI+P   T  SLL     +  V+ +H    + G +++I +SN++++ Y K 
Sbjct: 148 SLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKC 207

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             I+ + ++F  M  R++++WN+LI+ +   G   + L     + +        T    L
Sbjct: 208 GNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVL 267

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S  A    L+ G+ +HG +L+        +  ++I +Y K G +D + R+F    +KD +
Sbjct: 268 SVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVV 327

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF-- 612
            W A+IS   Q+G   +A++ F+ M   G +KP  AT  +V++AC+  G  + GT I   
Sbjct: 328 LWTAMISGLVQNGSADKALAVFRQMLKFG-VKPSTATMASVITACAQLGSYNLGTSILGY 386

Query: 613 -------------DSMVNDYGFIPAEDHLSCMLDLLGRA---------------GYLDEA 644
                        +S+V  Y      D  S + D++ R                GY+ EA
Sbjct: 387 ILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEA 446

Query: 645 ERVINSQHIQARSDNWW-------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
             + N    + RSDN         +L   CA+ G L LG+ I   ++ R   +P + V
Sbjct: 447 LFLFN----EMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVI-RNGLRPCILV 499


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 209/694 (30%), Positives = 361/694 (52%), Gaps = 56/694 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +A  +++ H + A+ +F  + S+  +KPD  +LS+ L AC++LR+   G ++H
Sbjct: 52  LFSWNFIIAAFAKNRHGRKAIEMFRSMDSA-GIKPDSATLSSVLGACSSLRDLEEGKKIH 110

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           + AL  GL +   V N ++S+Y                            + C+++   D
Sbjct: 111 SRALARGLSSSIIVQNALVSMY----------------------------ARCSRL---D 139

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VFDK+  + +  +NAMI  C   G  +  + LF+ M   ++  +  +FASV + C 
Sbjct: 140 VARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM---ELEPNEVTFASVFNAC- 195

Query: 201 AGLL----EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
             LL    E G+++H  +  S     V+V  A++TMY   G V  A +VF   +    + 
Sbjct: 196 -SLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHK--NV 252

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQ 313
           +S+N M+          EAL  + +M+   ++  E+T V    + ++    ++G ++H  
Sbjct: 253 VSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHEL 312

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           ++  G+++   V NA I+MY  C ++D A  +F++++  D+VSW  +I  Y Q    R A
Sbjct: 313 SVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREA 372

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFI--NGIITNIQVSNALI 428
           +  Y +M+  G+ PD+ TF S+L++   +  +E+ + +HA +    +G    + V+ ALI
Sbjct: 373 LELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVA-ALI 431

Query: 429 SAYAKNERIKQAYQIFHN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           + Y K  R+  + +IF +    + ++ WN +I  +   G+    +  +  +    L PDE
Sbjct: 432 NMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRGLDPDE 491

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFN 546
            TLS  LS+CA +  L  G+Q+H  ++ +   S+  +  NA+I++YA CG++  +  VF 
Sbjct: 492 STLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVFK 551

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D +SW  LISAY Q G+ + A+  ++ M   G ++P + TF  V  AC HAGLVD
Sbjct: 552 RMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEG-VQPTEPTFLCVFLACGHAGLVD 610

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +    F SM+ D    P  DH SC++ +L RAG L+EAE +++S      S  W +L  A
Sbjct: 611 ECKWYFQSMIEDR-ITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPFNPGSVGWTSLLGA 669

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           C  HG+L+  R  A   +E ++   + YVLLSN+
Sbjct: 670 CRTHGDLKRARRAADEAMELDRQDSAPYVLLSNV 703



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 180/610 (29%), Positives = 303/610 (49%), Gaps = 54/610 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++HA+ + +GL +   + + +L +Y                                K
Sbjct: 5   GRRIHAHIVASGLASDGFLGDHLLQMY-------------------------------GK 33

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G VD A +VF  +P R L  +N +I    +N +    I +FR M    ++ D+ + +SV
Sbjct: 34  CGSVDDAIQVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSV 93

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGY 252
           L  C +   LE G+++HS     G S  + V NAL++MY  C  +  A  VF+  E+K  
Sbjct: 94  LGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVFDKIESKSV 153

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCP---RVGY 308
           V    S+N M+   A  G  E+AL  F+ M    L P+E+TF SV +AC L P    VG 
Sbjct: 154 V----SWNAMIAACARQGEAEQALQLFKRM---ELEPNEVTFASVFNACSLLPDHREVGK 206

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           ++H +   S  EA  +V+ A +TMY   GK+  A  +F  +Q K++VSWN M+  Y Q N
Sbjct: 207 RIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNN 266

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
           L R A+  Y EM +  ++ DE T    L  S  + ++++   +H     +G  +NI+V N
Sbjct: 267 LDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLGIELHELSVAHGYDSNIKVQN 326

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ALIS Y K   +  A ++F  +   ++++W  LI  +  +G   + L+ + ++    + P
Sbjct: 327 ALISMYGKCNELDAARRVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEP 386

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           D+ T +  LS+C+  S L  G+ +H  +L + +  S   L  A+I +Y KCG LD S  +
Sbjct: 387 DKVTFTSVLSACSNTSDLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEI 446

Query: 545 FNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           F    + K  + WNA+I+AY Q G  + AV  +  M+  G + PD++T +++LSAC+   
Sbjct: 447 FQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMKQRG-LDPDESTLSSILSACAELQ 505

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWA 662
            ++ G ++   ++           L+ ++ +    G + EA+ V   + ++ R   +W  
Sbjct: 506 DLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCGEIREAKAVF--KRMKNRDVVSWTI 563

Query: 663 LFSACAAHGN 672
           L SA    G+
Sbjct: 564 LISAYVQGGD 573



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 266/510 (52%), Gaps = 14/510 (2%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR++H+ +  SG +    + + L+ MY  CG+V DA +VF           S+N ++
Sbjct: 2   LPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSL--FSWNFII 59

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A      +A+  FR M  A ++P   T  SV+ AC   R    G ++H++A+  G  
Sbjct: 60  AAFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLS 119

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V NA ++MY+ C ++D A ++F +++ K +VSWN MI+  A++     A+  +  M
Sbjct: 120 SSIIVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM 179

Query: 381 QSVGIRPDEFTFGSLLASSGFI----EMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +   + P+E TF S+  +   +    E+ + IH  +  + +  N+ V+ A+++ Y K  +
Sbjct: 180 E---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGK 236

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A Q+F+ +  +N+++WN ++  +  N    + L+ + E++  +++ DE T+ +AL  
Sbjct: 237 VGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGI 296

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A +  L+ G ++H   + +   S + + NA+I++Y KC +LD + RVF+ +   D +SW
Sbjct: 297 SASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSW 356

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            ALI AY QHG  +EA+  +K M+  G ++PD+ TFT+VLSACS+   ++ G  +   ++
Sbjct: 357 TALIVAYTQHGRNREALELYKQMEGEG-MEPDKVTFTSVLSACSNTSDLELGQALHARLL 415

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
                      ++ ++++  + G LD +  +  S         W A+ +A    G  R  
Sbjct: 416 ARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAA 475

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
             +  ++ +R  D P    L S + A A L
Sbjct: 476 VDLYDMMKQRGLD-PDESTLSSILSACAEL 504



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 100/172 (58%), Gaps = 5/172 (2%)

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  G++IH +++ + L S   LG+ ++ +Y KCG +D +++VF+ +  +   SWN +I+
Sbjct: 1   ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A+A++  G++A+  F++M   G IKPD AT ++VL ACS    +++G +I    +   G 
Sbjct: 61  AFAKNRHGRKAIEMFRSMDSAG-IKPDSATLSSVLGACSSLRDLEEGKKIHSRALA-RGL 118

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
             +    + ++ +  R   LD A  V +   I+++S  +W A+ +ACA  G 
Sbjct: 119 SSSIIVQNALVSMYARCSRLDVARVVFDK--IESKSVVSWNAMIAACARQGE 168


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 203/709 (28%), Positives = 360/709 (50%), Gaps = 78/709 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   + + PD + +     AC  L+ + FG  +H Y  +AGL    
Sbjct: 127 RIGLGEGALMGFVEM-LENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCV 185

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD +PDR
Sbjct: 186 FVASSLADMY-------------------------------GKCGVLDDARKVFDYIPDR 214

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           +   +NA++ G  +NG  +  I L  EM K  +     + ++ LS   + G +E G+Q H
Sbjct: 215 NAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSH 274

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDGLASVG 270
           +    +G      +  +++  Y   G +  A  +F+   G +    +++N+++ G    G
Sbjct: 275 AXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFD---GMIEKXXVTWNLLISGYVQQG 331

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            VEEA+   + M   +L+   +T  ++MSA       ++G ++    ++ G E+   +++
Sbjct: 332 LVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLAS 391

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
            A+ MY+ CG I  A  +F    +KD++ WNT++S YA   L   A+  + EMQ   + P
Sbjct: 392 TAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPP 451

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           +  T+                                N +I +  +N ++ +A ++F  M
Sbjct: 452 NVITW--------------------------------NLIILSLLRNGQVNEAKEMFLQM 479

Query: 448 SPR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
                  N+I+W T++NG + NG   + +    ++  S LRP+ +T++VALS+CA ++SL
Sbjct: 480 QSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASL 539

Query: 504 RHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N   S  + +  +++ +YAKCGD++ + RVF   +  +   +NA+ISA
Sbjct: 540 HFGRSIHGYIIRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISA 599

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA +G+ +EA++ +++++D G +KPD  T T++LSAC++   V+    +F  MV+ +G  
Sbjct: 600 YALYGKVREAITLYRSLED-GGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMK 658

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   M+DLL  AG  D+A R++     +  +    +LF +C+      L   ++  
Sbjct: 659 PCLEHYGLMVDLLASAGETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKH 718

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E D    YV++SN YA  G W+E A +RE++K  G+ K+PGCSWI
Sbjct: 719 LLESEPDNSGNYVMISNAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWI 767



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 158/659 (23%), Positives = 301/659 (45%), Gaps = 82/659 (12%)

Query: 28  LANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++ + + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 19  VSSLCKNGEIREALSLVTEMDYRNIRIGPEIYG--EILQGCVYERDLCTGQQIHAQILKK 76

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + + +V FS+++  +V+SW   +    ++G  + A  
Sbjct: 77  GDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALM 136

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F +M                ENG                +  DN+   +V   C A   
Sbjct: 137 GFVEM---------------LENG----------------IFPDNFVVPNVCKACGALQW 165

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNV 261
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+    Y+ D   +++N 
Sbjct: 166 SRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFD----YIPDRNAVAWNA 221

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           +M G    G  EEA+    +M    + P+ +T  + +SA         G Q HA  + +G
Sbjct: 222 LMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAXXIVNG 281

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                 +  + +  Y   G I+ A MIF  + EK  V+WN +IS Y Q+ L   AI    
Sbjct: 282 LXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXVTWNLLISGYVQQGLVEEAIHMCQ 341

Query: 379 EMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M+   ++ D  T  +L++   S+  +++ + I  +   +G+ ++I +++  +  YAK  
Sbjct: 342 LMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCG 401

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A ++F +   +++I WNTL++ +  +G   + L+ F E+ +  + P+  T ++ + 
Sbjct: 402 SIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIIL 461

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S  R   +   K++                                L++ +  I  + IS
Sbjct: 462 SLLRNGQVNEAKEMF-------------------------------LQMQSSGIFPNLIS 490

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +++   Q+G  +EA+   + MQ+ G ++P+  T T  LSAC++   +  G  I   +
Sbjct: 491 WTTMMNGLVQNGCSEEAILFLRKMQESG-LRPNAFTITVALSACANLASLHFGRSIHGYI 549

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           + +  +  +    + ++D+  + G +++AERV  S+ + +    + A+ SA A +G +R
Sbjct: 550 IRNQQYSFSAWIETSLVDMYAKCGDINKAERVFGSK-LCSELPLYNAMISAYALYGKVR 607



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 200/422 (47%), Gaps = 11/422 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQA 314
           SY   +  L   G + EAL    +M   ++R     +  ++  C+  R    G Q+HAQ 
Sbjct: 14  SYFHRVSSLCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHAQI 73

Query: 315 MKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           +K G  +     +    +  Y+ C  ++ A ++F++L+ +++ SW  +I    +  LG  
Sbjct: 74  LKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEG 133

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A++ ++EM   GI PD F   ++  + G ++       +H +V   G+   + V+++L  
Sbjct: 134 ALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLAD 193

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   +  A ++F  +  RN + WN L+ G++ NG   + ++  SE+    + P   T
Sbjct: 194 MYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVT 253

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           +S  LS+ A +  +  GKQ H   + N L     LG +++  Y   G ++ +  +F+ MI
Sbjct: 254 VSTCLSASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMI 313

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           EK  ++WN LIS Y Q G  +EA+   + M+    +K D  T + ++SA +    +  G 
Sbjct: 314 EKXXVTWNLLISGYVQQGLVEEAIHMCQLMRR-ENLKFDCVTLSTLMSAATSTQNLKLGK 372

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            I    +  +G        S  +D+  + G +  A++V +S  +Q     W  L SA A 
Sbjct: 373 EIQCYCIR-HGLESDIVLASTAVDMYAKCGSIVNAKKVFDST-VQKDLILWNTLLSAYAD 430

Query: 670 HG 671
            G
Sbjct: 431 SG 432



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 181/415 (43%), Gaps = 61/415 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  ++A+H+  Q+     LK D  +LST ++A  + +N   G ++  Y +
Sbjct: 321 NLLISGYVQQGLVEEAIHM-CQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 379

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R GL++   +A+T + +Y     +V+ K+VF      D+  W T LSA            
Sbjct: 380 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 439

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 440 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLV 499

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + ++    LS C +   L FGR +H  + ++  +S   
Sbjct: 500 QNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSA 559

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDM 282
            +  +L+ MY  CG++  A +VF      +C  +  YN M+   A  G+V EA+  +R +
Sbjct: 560 WIETSLVDMYAKCGDINKAERVFGSK---LCSELPLYNAMISAYALYGKVREAITLYRSL 616

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAMKSGFEAYTSVSNAAITMYS 334
               ++P  +T  S++SAC   R   Q        V    MK   E Y       + + +
Sbjct: 617 EDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHY----GLMVDLLA 672

Query: 335 SCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           S G+ D+A  +   +  K D     ++  + ++++  ++ ++ YL    +   PD
Sbjct: 673 SAGETDKALRLMEEMPYKPDARMVQSLFESCSKQH--KTELVEYLSKHLLESEPD 725


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  322 bits (824), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 186/552 (33%), Positives = 298/552 (53%), Gaps = 14/552 (2%)

Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +  S+L VC   GL + G Q+H  + KSG    +   N LI MY  C   + A KVF+  
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV--- 306
                + +S++ +M G    G ++ +L  F +M    + P+E TF + + AC        
Sbjct: 68  PER--NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   +K GFE    V N+ + MYS CG+I+EA  +F R+ ++ ++SWN MI+ +  
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185

Query: 367 RNLGRSAILAYLEMQSVGI--RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI--IT 419
              G  A+  +  MQ   I  RPDEFT  SLL   +S+G I   + IH F+  +G    +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           +  ++ +L+  Y K   +  A + F  +  + +I+W++LI G+   G  V+ +  F  L 
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
               + D + LS  +   A  + LR GKQ+    +K     + S+ N+++ +Y KCG +D
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + + F  M  KD ISW  +I+ Y +HG GK++V  F  M     I+PD+  + AVLSAC
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLSAC 424

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH+G++ +G  +F  ++  +G  P  +H +C++DLLGRAG L EA+ +I++  I+     
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W  L S C  HG++ LG+ +  +LL  +   P+ YV++SN+Y  AG W E  N REL   
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544

Query: 720 TGVIKQPGCSWI 731
            G+ K+ G SW+
Sbjct: 545 KGLKKEAGMSWV 556



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/535 (25%), Positives = 251/535 (46%), Gaps = 61/535 (11%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +L + L  C     +  G Q+H Y L++G       +N ++ +Y   R+ +         
Sbjct: 8   NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL--------- 58

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                                  A +VFD MP+R++  ++A+++G   NG     + LF 
Sbjct: 59  ----------------------MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS 96

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           EM +  +  + ++F++ L  C  GL   LE G Q+H    K GF  +V V N+L+ MY  
Sbjct: 97  EMGRQGIYPNEFTFSTNLKAC--GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 154

Query: 236 CGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASL--RPSE 291
           CG + +A KVF      + D   IS+N M+ G    G   +AL  F  M  A++  RP E
Sbjct: 155 CGRINEAEKVFRR----IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210

Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIF 346
            T  S++ AC    +   G Q+H   ++SGF   +S  ++ + + +Y  CG +  A   F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
            +++EK ++SW+++I  YAQ      A+  +  +Q +  + D F   S++   A    + 
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330

Query: 404 MVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
             + + A      +G+ T+  V N+++  Y K   + +A + F  M  +++I+W  +I G
Sbjct: 331 QGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS- 520
           +  +G   + ++ F E+L   + PDE      LS+C+    ++ G+++   +L+ + I  
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGE---GKE 571
           ++     ++ L  + G L  +  + + M  K  +  W  L+S    HG+   GKE
Sbjct: 449 RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 51/442 (11%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  + +L LF ++     + P+ ++ ST L AC  L     G Q+H + L+ G +    
Sbjct: 85  NGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N+++ +Y                               +K G ++ A +VF ++ DR 
Sbjct: 144 VGNSLVDMY-------------------------------SKCGRINEAEKVFRRIVDRS 172

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDV--RRDNYSFASVLSVCDA-GLLEFGRQL 210
           L  +NAMI G    GY    +  F  M + ++  R D ++  S+L  C + G++  G+Q+
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232

Query: 211 HSLVTKSGFSCLVS--VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           H  + +SGF C  S  +  +L+ +Y  CG +  A K F++ K      IS++ ++ G A 
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM--ISWSSLILGYAQ 290

Query: 269 VGRVEEALIRFRDM--LVASLRPSEL-TFVSVMSACLCPRVGYQVHAQAMK--SGFEAYT 323
            G   EA+  F+ +  L + +    L + + V +     R G Q+ A A+K  SG E  T
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE--T 348

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SV N+ + MY  CG +DEA   FA +Q KD++SW  +I+ Y +  LG+ ++  + EM   
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408

Query: 384 GIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            I PDE  + ++L++   SG I E  E+    +  +GI   ++    ++    +  R+K+
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468

Query: 440 AYQIFHNMSPR-NIITWNTLIN 460
           A  +   M  + N+  W TL++
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLS 490



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 8/167 (4%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G + +A+ LF ++   +  + D ++LS+ +   A+      G Q+ A A++      
Sbjct: 289 AQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
             V N+++ +Y     +   ++ F+E+Q  DV SWT  ++   K G    +  +F +M  
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407

Query: 150 --PDRDLPVYNAMITGCTENGYEDIGIGLFR---EMHKLDVRRDNYS 191
              + D   Y A+++ C+ +G    G  LF    E H +  R ++Y+
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 454


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 212/688 (30%), Positives = 349/688 (50%), Gaps = 56/688 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH--VANTILSLYKNARDLVSV 111
           + D  SL+  ++A A L   +FG  +H + ++ G K   H    N+++SLY   RD+ + 
Sbjct: 171 QADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAA 230

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + +F E++  D+ SW                               NAM+ G   N    
Sbjct: 231 EILFKEMKYKDIVSW-------------------------------NAMLDGLALNQRIW 259

Query: 172 IGIGLFREMHKLD-VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
               L  EM  L  V+ D+ +   ++ +C +  LL  GR +H L  +       SV N+L
Sbjct: 260 EAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSL 319

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY  C +V  A  VF+       D +S+N M+ G +  G   EA   FR +L +  + 
Sbjct: 320 IDMYSKCKDVKRAEHVFKAIPER--DLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQC 377

Query: 290 SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           S  T ++++ +C      + G  +H   +K GF       N+ + MY +CG +  AC  F
Sbjct: 378 SLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL-VAC--F 434

Query: 347 ARLQE----KDIVSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDEFTFGSLLASSGF 401
           + LQ      DIV WNT+++   Q      A+ A+ L  Q   +  D     +++++ G 
Sbjct: 435 SLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGN 494

Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +E++     +H       + ++I+V NALI+ Y +   I+ A  IF     RN+ +WN +
Sbjct: 495 LELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCM 554

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+ F  N    + L+ F  +   E  P+E T+   LS+C ++  LRHGKQIHG+V+++ L
Sbjct: 555 ISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRL 611

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                +  A+  +Y+ CG LD + ++F    E+   +WN++ISA+  H  G +A+  F  
Sbjct: 612 QGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHE 671

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M++ G  +P ++TF ++LSACSH+GLV++G   + +M+  +      +H  CM+D+LGRA
Sbjct: 672 MRECG-TRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRA 730

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G L EA   I     Q     W AL SAC+ HG+L++GR +A LL E E +    Y+ LS
Sbjct: 731 GRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLS 790

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQP 726
           N+Y AAG W++A  +R +++  G +K+P
Sbjct: 791 NMYVAAGRWKDAVELRRIIQDKG-LKKP 817



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 180/653 (27%), Positives = 309/653 (47%), Gaps = 68/653 (10%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A++LFV++     +  D  +L   ++A +++ N   G  LH  + + GL +   + N ++
Sbjct: 57  AVNLFVELMG-EGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALI 115

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y    +L S                    S C           VF  M  RD+  +N+
Sbjct: 116 DMYAKCGELSS--------------------SEC-----------VFGGMEYRDIISWNS 144

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG 218
           M+ GC  N Y    +  F++M     + DN S    +S     G L FG+ +H    K G
Sbjct: 145 MMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLG 204

Query: 219 FSCLV--SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           +  +   S  N+LI++Y  C ++  A  +F+E K    D +S+N M+DGLA   R+ EA 
Sbjct: 205 YKDISHNSFENSLISLYSQCRDIQAAEILFKEMK--YKDIVSWNAMLDGLALNQRIWEAF 262

Query: 277 IRFRDM-LVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
               +M L+  ++P  +T V ++  C   +  R G  VH   ++       SV+N+ I M
Sbjct: 263 DLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDM 322

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFT 391
           YS C  +  A  +F  + E+D+VSWN MIS Y+Q    R A   + + +QS      + +
Sbjct: 323 YSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSY----SQCS 378

Query: 392 FGSLLA------SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             +LLA      SS F++  E IH +    G   N    N+L+  Y     +   + +  
Sbjct: 379 LSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQ 438

Query: 446 NMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL----SSCARI 500
            +S   +I+ WNT++ G   NG   + L+ F+  LM +  PD    SVAL    S+C  +
Sbjct: 439 TVSAAADIVCWNTVMAGCTQNGHFWEALKAFN--LMRQ-DPDVCHDSVALFNVISACGNL 495

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             L  G  +HG  LK  + S + + NA+IT+Y +CG+++ +  +F     ++  SWN +I
Sbjct: 496 ELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMI 555

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           SA++Q+ +G+ A+  F  ++     +P++ T   +LSAC+  G++  G +I   ++    
Sbjct: 556 SAFSQNKDGRRALELFCHIE----FEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSR- 610

Query: 621 FIPAEDHLSCML-DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            +     +S  L D+    G LD A ++  S   ++ +  W ++ SA   H N
Sbjct: 611 -LQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVA-AWNSMISAFGFHSN 661



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 277/629 (44%), Gaps = 44/629 (6%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T+ L+A ++      +  +FD++  RD+ ++NAMIT   EN    + + LF E+    V 
Sbjct: 11  TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70

Query: 187 RDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D+ +   V+S     G L  GR LH +  K+G      + NALI MY  CG +  +  V
Sbjct: 71  LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F   +    D IS+N MM G A     +++L  F+ M  +S +   ++    +SA     
Sbjct: 131 FGGMEYR--DIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG 188

Query: 304 -PRVGYQVHAQAMKSGFE--AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               G  +H   +K G++  ++ S  N+ I++YS C  I  A ++F  ++ KDIVSWN M
Sbjct: 189 ELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAM 248

Query: 361 ISTYAQRNLGRSAILAYLEMQSVG-IRPDEFT---FGSLLASSGFIEMVEMIHAFVFING 416
           +   A       A     EMQ +G ++PD  T      L A    +     +H       
Sbjct: 249 LDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRRE 308

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  +  V+N+LI  Y+K + +K+A  +F  +  R++++WN +I+G+  NG   +    F 
Sbjct: 309 MGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFR 368

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +LL S  +    TL   L SC     L+ G+ IH + LK    +     N+++ +Y  CG
Sbjct: 369 QLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCG 428

Query: 537 DLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           DL     +   +    D + WN +++   Q+G   EA+  F  M+    +  D      V
Sbjct: 429 DLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNV 488

Query: 596 LSACSH-----AG----------LVDDGTRIFDSMVNDYGFIPAEDH------------- 627
           +SAC +     AG          L++   R+ ++++  YG     ++             
Sbjct: 489 ISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNL 548

Query: 628 --LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG-LLL 684
              +CM+    +      A  +      +        + SAC   G LR G+ I G ++ 
Sbjct: 549 CSWNCMISAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIR 608

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANI 713
            R Q    V   L ++Y+  G  + A  I
Sbjct: 609 SRLQGNSFVSAALEDMYSNCGRLDTAFQI 637



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 143/560 (25%), Positives = 249/560 (44%), Gaps = 45/560 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  L  L+ +    +A  L  ++     ++PD  ++   +  CA L     G  +H
Sbjct: 242 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVH 301

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              LR  +     V N+++ +Y   +D+   + VF  I   D+ SW              
Sbjct: 302 GLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWN------------- 348

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                             AMI+G ++NG+      LFR++ +   +    +  ++L  CD
Sbjct: 349 ------------------AMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCD 390

Query: 201 AG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L+FG  +H    K GF+     VN+L+ MY NCG++V AC    +      D + +
Sbjct: 391 SSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLV-ACFSLLQTVSAAADIVCW 449

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           N +M G    G   EAL  F  M     +    +   +V+SAC    +   G  +H  A+
Sbjct: 450 NTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLAL 509

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+  E+   V NA ITMY  CG+I+ A +IF     +++ SWN MIS ++Q   GR A+ 
Sbjct: 510 KTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALE 569

Query: 376 AYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  ++     P+E T   +L++    G +   + IH  V  + +  N  VS AL   Y+
Sbjct: 570 LFCHIE---FEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYS 626

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
              R+  A+QIF +   R++  WN++I+ F  +    + ++ F E+     RP + T   
Sbjct: 627 NCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFIS 686

Query: 493 ALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IE 550
            LS+C+    +  G   +  +L+  N+ +       M+ +  + G L  +      M  +
Sbjct: 687 LLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQ 746

Query: 551 KDTISWNALISAYAQHGEGK 570
            +   W AL+SA + HG+ K
Sbjct: 747 PEPGVWGALLSACSYHGDLK 766



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 227/491 (46%), Gaps = 58/491 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S++GH ++A HLF Q+  S+  +  + +L   L +C +     FG  +H
Sbjct: 344 LVSWNAMISGYSQNGHSREAQHLFRQLLQSYS-QCSLSTLLAILPSCDSSEFLQFGESIH 402

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKM 136
            + L+ G    P   N+++ +Y N  DLV+    FS +Q      D+  W T ++ CT+ 
Sbjct: 403 CWQLKLGFANNPLAVNSLMLMYINCGDLVA---CFSLLQTVSAAADIVCWNTVMAGCTQN 459

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           GH   A + F+ M  R  P                            DV  D+ +  +V+
Sbjct: 460 GHFWEALKAFNLM--RQDP----------------------------DVCHDSVALFNVI 489

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C +  LL  G  LH L  K+     + V NALITMY  CG + +A  +F    G+ C+
Sbjct: 490 SACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF----GFSCN 545

Query: 256 H--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
               S+N M+   +       AL  F  +      P+E+T V ++SAC      R G Q+
Sbjct: 546 RNLCSWNCMISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHGKQI 602

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   ++S  +  + VS A   MYS+CG++D A  IF    E+ + +WN+MIS +   + G
Sbjct: 603 HGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNG 662

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNA 426
             AI  + EM+  G RP + TF SLL++   SG + E +      + +  +  + +    
Sbjct: 663 GKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVC 722

Query: 427 LISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ++    +  R+ +AY+    M  +     W  L++    +G    G +  +ELL  EL P
Sbjct: 723 MVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMG-REVAELLF-ELEP 780

Query: 486 DEYTLSVALSS 496
           +     ++LS+
Sbjct: 781 ENVGYYISLSN 791



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 5/299 (1%)

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G  A+   S + +T YS       +  +F  +  +D++ WN MI+   +      A+  +
Sbjct: 2   GALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLF 61

Query: 378 LEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           +E+   G+  D  T   ++++S   G +    ++H   F  G++++  + NALI  YAK 
Sbjct: 62  VELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKC 121

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             +  +  +F  M  R+II+WN+++ G   N +P + L +F ++  S  + D  +L+ A+
Sbjct: 122 GELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAV 181

Query: 495 SSCARISSLRHGKQIHGYVLKNNL--ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           S+ A +  L  G+ IHG+ +K     IS  S  N++I+LY++C D+  +  +F  M  KD
Sbjct: 182 SASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKD 241

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +SWNA++   A +    EA      MQ +G ++PD  T   ++  C+   L+ +G  +
Sbjct: 242 IVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAV 300


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 188/529 (35%), Positives = 285/529 (53%), Gaps = 42/529 (7%)

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  VFE  +    + + +N M+ G A       +L  +  M+   L P+  TF  ++ +C
Sbjct: 17  ATSVFETIQE--PNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSC 74

Query: 302 LCPRV---GYQVHAQAMKSGFE----AYTSV---------------------------SN 327
              +    G Q+H Q +K GF+     +TS+                             
Sbjct: 75  AKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A IT Y+S G I  A  +F  +  KD+VSWN MIS YA+    + A+  + EM  + +RP
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRP 194

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           DE T+ ++L   A SG IE+   +H++V  +G  +N+++ NALI  Y+K   ++ A  +F
Sbjct: 195 DESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLF 254

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +S +++I+WNTLI G+       + L  F E+L S   P++ T+   L +CA + ++ 
Sbjct: 255 QGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAID 314

Query: 505 HGKQIHGYVLK--NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            G+ IH Y+ K    + +  SL  ++I +YAKCGD++ + +VFN M+ K   SWNA+I  
Sbjct: 315 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFG 374

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +A HG    +   F  M+ +G I+PD  TF  +LSACSH+G++D G  IF SM  DY   
Sbjct: 375 FAMHGRADASFDLFSRMRKIG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H  CM+DLLG +G   EAE +IN+  ++     W +L  AC  HGN+ L    A  
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L++ E + PS Y+LLSNIYA+AG WE+ A IR LL    + K PGCS I
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSI 542



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 154/527 (29%), Positives = 255/527 (48%), Gaps = 47/527 (8%)

Query: 129 FLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
            +  C    H D   YA  VF+ + + +  ++N MI G   +      + L+  M  L +
Sbjct: 1   LIELCVPSPHFDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGL 60

Query: 186 RRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             ++Y+F  +L  C  +     G+Q+H  V K GF   + V  +LI+MY     + DA K
Sbjct: 61  LPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYK 120

Query: 245 VFEEAK------------GY-----------------VCDHISYNVMMDGLASVGRVEEA 275
           VF+ +             GY                 V D +S+N M+ G A  G  +EA
Sbjct: 121 VFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEA 180

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F +M+  ++RP E T+V+V+SAC       +G QVH+     GF++   + NA I +
Sbjct: 181 LELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDL 240

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS CG+++ AC +F  L  KD++SWNT+I  Y   NL + A+L + EM   G  P++ T 
Sbjct: 241 YSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTM 300

Query: 393 GSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
            S+L   A  G I++   IH ++   + G+     +  +LI  YAK   I+ A+Q+F++M
Sbjct: 301 LSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSM 360

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             +++ +WN +I GF ++G        FS +    + PD+ T    LS+C+    L  G+
Sbjct: 361 LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420

Query: 508 QIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQ 565
            I   + ++  +  K+     MI L    G    +  + N M +E D + W +L+ A   
Sbjct: 421 HIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKM 480

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
           HG  + A S     Q++ +I+P+  +   +LS   + AG  +D  RI
Sbjct: 481 HGNVELAES---FAQNLIKIEPENPSSYILLSNIYASAGRWEDVARI 524



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 241/477 (50%), Gaps = 27/477 (5%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P+ Y+    L +CA  +    G Q+H   L+ G     +V  +++S+Y     L    
Sbjct: 60  LLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAY 119

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +VF    + DV S+T  ++     G +  A ++FD++P +D+  +NAMI+G  E G    
Sbjct: 120 KVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKE 179

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF EM K++VR D  ++ +VLS C  +G +E GRQ+HS V   GF   + +VNALI 
Sbjct: 180 ALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALID 239

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           +Y  CG V  AC +F+       D IS+N ++ G   +   +EAL+ F++ML +   P++
Sbjct: 240 LYSKCGEVETACGLFQGLS--YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPND 297

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +T +SV+ AC       +G  +H    K   G    +S+  + I MY+ CG I+ A  +F
Sbjct: 298 VTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 357

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
             +  K + SWN MI  +A      ++   +  M+ +GI PD+ TF  LL++     M++
Sbjct: 358 NSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLD 417

Query: 407 M-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHN--MSPRNIITWNTLIN 460
           +  H F  +     +   ++    +I     +   K+A ++ +   M P  +I W +L+ 
Sbjct: 418 LGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI-WCSLLK 476

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS----------CARISSLRHGK 507
              ++G  V+  + F++ L+ ++ P+  +  + LS+           ARI +L +GK
Sbjct: 477 ACKMHG-NVELAESFAQNLI-KIEPENPSSYILLSNIYASAGRWEDVARIRALLNGK 531


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  321 bits (823), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 206/606 (33%), Positives = 303/606 (50%), Gaps = 78/606 (12%)

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           C +  L + RQL   +++       ++V+     Y   G++  A  VFE+A   + D + 
Sbjct: 60  CKSSELNYARQLFDEISEPDKIARTTMVSG----YCASGDITLARGVFEKAPVCMRDTVM 115

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQA 314
           YN M+ G +       A+  F  M     +P   TF SV++         +   Q HA A
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175

Query: 315 MKSGFEAYTSVSNAAITMYSSCGK----IDEACMIFARLQEKDIVSW------------- 357
           +KSG    TSVSNA +++YS C      +  A  +F  + EKD  SW             
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235

Query: 358 -------------------NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
                              N MIS Y  R   + A+     M S GI  DEFT+ S++  
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295

Query: 397 -ASSGFIEMVEMIHAFV---------FINGIIT---------------------NIQVSN 425
            A++G +++ + +HA+V         F N +++                     ++   N
Sbjct: 296 CATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+S Y  +  I +A  IF  M  +NI++W  +I+G   NGF  +GL+ FS +      P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            +Y  S A+ SCA + +  +G+Q H  +LK    S +S GNA+IT+YAKCG ++ + +VF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M   D++SWNALI+A  QHG G EAV  ++ M   G I+PD+ T   VL+ACSHAGLV
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLV 534

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           D G + FDSM   Y   P  DH + ++DLL R+G   +AE VI S   +  ++ W AL S
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
            C  HGN+ LG I A  L     +    Y+LLSN++AA G WEE A +R+L++  GV K+
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKE 654

Query: 726 PGCSWI 731
             CSWI
Sbjct: 655 VACSWI 660



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 171/670 (25%), Positives = 282/670 (42%), Gaps = 126/670 (18%)

Query: 61  STTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +  L  C  LR  +      +H   +  G +   H+ N ++ +Y  + +L   +++F EI
Sbjct: 16  AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI 75

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGL 176
             PD  + TT +S     G +  A  VF+K P   RD  +YNAMITG + N      I L
Sbjct: 76  SEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINL 135

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEFGR------QLHSLVTKSGFSCLVSVVNALI 230
           F +M     + DN++FASVL    AGL           Q H+   KSG   + SV NAL+
Sbjct: 136 FCKMKHEGFKPDNFTFASVL----AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191

Query: 231 TMYFNCGN----VVDACKVFEE------------AKGYVCDH------------------ 256
           ++Y  C +    +  A KVF+E              GYV +                   
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQ 313
           ++YN M+ G  + G  +EAL   R M+ + +   E T+ SV+ AC      ++G QVHA 
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311

Query: 314 AMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY-------- 364
            ++   E ++    N+ +++Y  CGK DEA  IF ++  KD+VSWN ++S Y        
Sbjct: 312 VLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369

Query: 365 -----------------------AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
                                  A+   G   +  +  M+  G  P ++ F   + S   
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429

Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +      +  HA +   G  +++   NALI+ YAK   +++A Q+F  M   + ++WN L
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I     +G   + +  + E+L   +RPD  TL   L++C+    +  G++          
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF-------- 541

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                  ++M T+Y                I      +  LI    + G+  +A S  ++
Sbjct: 542 -------DSMETVY---------------RIPPGADHYARLIDLLCRSGKFSDAESVIES 579

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLGR 637
           +      KP    + A+LS C   G ++ G    D +   +G IP  D    +L ++   
Sbjct: 580 LP----FKPTAEIWEALLSGCRVHGNMELGIIAADKL---FGLIPEHDGTYMLLSNMHAA 632

Query: 638 AGYLDEAERV 647
            G  +E  RV
Sbjct: 633 TGQWEEVARV 642



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 145/282 (51%), Gaps = 5/282 (1%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++     G YQ+AL +  ++ SS  ++ D ++  + + ACA       G Q+H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVH 309

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           AY LR    ++ H  N+++SLY         + +F ++   D+ SW   LS     GH+ 
Sbjct: 310 AYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F +M ++++  +  MI+G  ENG+ + G+ LF  M +      +Y+F+  +  C 
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G    G+Q H+ + K GF   +S  NALITMY  CG V +A +VF        D +S+
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CLDSVSW 486

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           N ++  L   G   EA+  + +ML   +RP  +T ++V++AC
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528



 Score = 45.8 bits (107), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 54/277 (19%), Positives = 115/277 (41%), Gaps = 47/277 (16%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           + Y  ++ L    R +SL+  + +HG ++      +  + N +I +Y K  +L+ + ++F
Sbjct: 13  NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72

Query: 546 NMMIE---------------------------------KDTISWNALISAYAQHGEGKEA 572
           + + E                                 +DT+ +NA+I+ ++ + +G  A
Sbjct: 73  DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD----SMVNDYGFIPA-EDH 627
           ++ F  M+  G  KPD  TF +VL+    A + DD  +       ++ +  G+I +  + 
Sbjct: 133 INLFCKMKHEG-FKPDNFTFASVLAGL--ALVADDEKQCVQFHAAALKSGAGYITSVSNA 189

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
           L  +      +  L  + R +  + ++    +W  + +    +G   LG      LLE  
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE----ELLEGM 245

Query: 688 QD--KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
            D  K   Y  + + Y   G ++EA  +   +  +G+
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI 282


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 190/571 (33%), Positives = 302/571 (52%), Gaps = 22/571 (3%)

Query: 176 LFREMHKLD----VRRDNYSF--ASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNA 228
           LF  +H L+     R  N  F  AS+L  C   +    G Q HS   KSG      V N+
Sbjct: 41  LFEAIHVLNSIDWTRLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNS 100

Query: 229 LITMYFNCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           L+ +YF  G N+ +A +VF+    +  D IS+  M+ G   V + +++L  F +ML   +
Sbjct: 101 LLALYFKLGPNLFEARRVFDGL--FYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGI 158

Query: 288 RPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P+  T  +V+ AC      R+G   H   M  GF+    +S A I MY     +D+A +
Sbjct: 159 EPNGFTLSAVIKACSGLGDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAIL 218

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIE 403
           +F  L + D + W ++IS + + ++   A+  +  M +  G+ PD FTFG++L + G + 
Sbjct: 219 VFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLG 278

Query: 404 MVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            ++    +HA V  +G+  N+ V ++L+  Y K   + Q+  +F  MS +N+++W  L+ 
Sbjct: 279 RLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLG 338

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  NG      +    +     + D Y+    L +CA ++++R GK++H   +K     
Sbjct: 339 GYCQNG----DFESVIRIFREGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWR 394

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            +   +A++ LYAKCG +D + R+F  M  ++ I+WN++I  +AQ+G G E    F  M 
Sbjct: 395 DVVTESALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMI 454

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           + G I+PD  +F  VL ACSHAGLVD G + F +M   Y   P  +H +CM+DLLGRAG 
Sbjct: 455 EEG-IRPDYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGL 513

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L+EAE +I + + +     W  L  ACAA  +      IA   +E + D    YV L+N+
Sbjct: 514 LEEAENLIENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANV 573

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y A G W++A  IR L+ + GV K PG SWI
Sbjct: 574 YRAVGRWDDAVKIRNLMTKRGVGKMPGTSWI 604



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 264/602 (43%), Gaps = 63/602 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           +SG   +A+H+   I  + +L    +  ++ L  C    +   G Q H++A+++GL    
Sbjct: 37  KSGSLFEAIHVLNSIDWT-RLSNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDR 95

Query: 93  HVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            V N++L+LY K   +L   +RVF  +   D+ SWT+ ++   K+           + P 
Sbjct: 96  FVGNSLLALYFKLGPNLFEARRVFDGLFYKDLISWTSMITGYVKV-----------EKPK 144

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           + L                     LF EM  L +  + ++ ++V+  C   G L  G+  
Sbjct: 145 KSLE--------------------LFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCF 184

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H +V   GF     +  ALI MY     V DA  VF E      D I +  ++       
Sbjct: 185 HGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQ--PDAICWTSIISAFTRND 242

Query: 271 RVEEALIRFRDMLVA-SLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVS 326
             ++AL  F  M     L P   TF +V++AC      + G +VHA+ + SG      V 
Sbjct: 243 VYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVE 302

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           ++ + MY  C  ++++  +F R+  K++VSW  ++  Y Q     S I  + E    G +
Sbjct: 303 SSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE----GKK 358

Query: 387 PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D ++FG++L +   +  V     +H          ++   +AL+  YAK   I  AY+I
Sbjct: 359 VDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRI 418

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  MS RN+ITWN++I GF  NG   +  Q F E++   +RPD  +    L +C+    +
Sbjct: 419 FVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLV 478

Query: 504 RHGKQIHGYVLKNNLISKMSLG----NAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNA 558
             GK+   Y      + ++  G    N MI L  + G L+ +  +      +D  S W  
Sbjct: 479 DQGKK---YFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTV 535

Query: 559 LISAYA--QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA-GLVDDGTRIFDSM 615
           L+ A A   H    E ++  KA++    +KPD       L+    A G  DD  +I + M
Sbjct: 536 LLGACAASPHSATAERIA-KKAVE----LKPDHHLSYVYLANVYRAVGRWDDAVKIRNLM 590

Query: 616 VN 617
             
Sbjct: 591 TK 592



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 119/315 (37%), Gaps = 99/315 (31%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +R+  Y  AL  F  +   H L PD ++  T L AC NL     G ++HA  + +G
Sbjct: 235 ISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSG 294

Query: 88  LKAYPHVANTILSLYKNAR-------------------------------DLVSVKRVFS 116
           L     V ++++ +Y   R                               D  SV R+F 
Sbjct: 295 LSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR 354

Query: 117 EIQNPDVYSWTTFLSAC-----------------------------------TKMGHVDY 141
           E +  D YS+ T L AC                                    K G +D+
Sbjct: 355 EGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDF 414

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD- 200
           A  +F +M  R+L  +N+MI G  +NG       LF EM +  +R D  SF  VL  C  
Sbjct: 415 AYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSH 474

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           AGL++ G++  + +T                            +V+E   G   +H  YN
Sbjct: 475 AGLVDQGKKYFAAMT----------------------------EVYEIKPG--IEH--YN 502

Query: 261 VMMDGLASVGRVEEA 275
            M+D L   G +EEA
Sbjct: 503 CMIDLLGRAGLLEEA 517


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 209/713 (29%), Positives = 349/713 (48%), Gaps = 47/713 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ ++ +G    AL LF ++ S   + P+ ++L+  L AC    +  F  Q+HA A++  
Sbjct: 133 VSAITAAGDAGAALRLFAEM-SEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLE 191

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
               P+V+++++  Y +  ++   +R   +       SW   L+   + G       VFD
Sbjct: 192 GLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFD 251

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           K+                E+G E                   Y+  +VL  C + GL + 
Sbjct: 252 KL---------------VESGDE----------------ISKYTLPTVLKCCMELGLAKS 280

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+ +H LV K G      + N LI MY  C +  DA +VF  A+    D +  ++M+   
Sbjct: 281 GQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVF--ARIDEPDVVHCSLMISCF 338

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----YQVHAQAMKSGFEA 321
                  EA   F  M    ++P++ TFV +  A +  R G       +HA  +KSGF  
Sbjct: 339 DRHDMAPEAFDIFMQMSDMGVKPNQYTFVGL--AIVASRTGDVNLCRSIHAHIVKSGFSR 396

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +A + MY   G + +A + F  +Q  DI SWNT++S +   N     +  + E+ 
Sbjct: 397 TKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELI 456

Query: 382 SVGIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G+  +++T+ G L   +  +++     +HA V  +G   +  VS  L+  Y +     
Sbjct: 457 CEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFT 516

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A  +F  +  R++ +W  +++ +       + ++ F  +L    RP++ TL+ +LS C+
Sbjct: 517 NARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCS 576

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            ++ L  G Q+H Y +K+   S + + +A++ +Y KCG+L  +  +F+     D + WN 
Sbjct: 577 DLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDTHDLVEWNT 635

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I  YAQHG G +A+  F+ M D G + PD+ TF  VLSACSHAGL+D+G R F  + + 
Sbjct: 636 IICGYAQHGHGYKALEAFQEMIDEGNV-PDEITFVGVLSACSHAGLLDEGRRYFKLLSSV 694

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           YG  P  +H +CM+D+L +AG L EAE +IN   +   +  W  +  AC  HGN+ +   
Sbjct: 695 YGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAER 754

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  L E + D  S  +LLSNIYA    W + A +R +L   GV K+PGCSWI
Sbjct: 755 AAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWI 807



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/624 (25%), Positives = 286/624 (45%), Gaps = 44/624 (7%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           ++ S +  L  CA  R    G  LHA  LR+G +    + +++L++Y     L   + VF
Sbjct: 59  ELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVF 118

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             + + DV +WT  +SA T  G    A                               + 
Sbjct: 119 DGMPHRDVVAWTAMVSAITAAGDAGAA-------------------------------LR 147

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF EM +  V  + ++ A+ L  C  G  L F  Q+H+   K        V ++L+  Y 
Sbjct: 148 LFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYV 207

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           +CG V  A +   ++   V   +S+N +++  A  G   + ++ F  ++ +    S+ T 
Sbjct: 208 SCGEVDVAERALLDSP--VRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTL 265

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+  C+     + G  VH   +K G E    ++N  I MYS C   ++A  +FAR+ E
Sbjct: 266 PTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDE 325

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMI 408
            D+V  + MIS + + ++   A   +++M  +G++P+++TF  L    + +G + +   I
Sbjct: 326 PDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSI 385

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA +  +G      V +A++  Y K   ++ A   F  M   +I +WNTL++GF      
Sbjct: 386 HAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNC 445

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
             GL+ F EL+   +  ++YT    L  C  +  LR G Q+H  VLK+       +   +
Sbjct: 446 EHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKML 505

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +Y + G    +  VF+ + E+D  SW  ++S YA+  EG++A+ CF++M    + +P+
Sbjct: 506 LDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENK-RPN 564

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
            AT    LS CS    +  G ++    +   G+  +    S ++D+  + G L +AE + 
Sbjct: 565 DATLATSLSVCSDLACLGSGLQLHSYTIKS-GWNSSVVS-SALVDMYVKCGNLADAEMLF 622

Query: 649 NSQHIQARSDNWWALFSACAAHGN 672
           +        + W  +    A HG+
Sbjct: 623 DESDTHDLVE-WNTIICGYAQHGH 645



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 10/335 (2%)

Query: 280 RDMLVASLRPSEL-TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           RD     LR  EL ++ + +  C   R    G  +HA+ ++SG      + ++ + MY  
Sbjct: 48  RDDERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCK 107

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG++ +A  +F  +  +D+V+W  M+S         +A+  + EM   G+ P+ F   + 
Sbjct: 108 CGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAA 167

Query: 396 LASSGF---IEMVEMIHA-FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           L +      +     +HA  V + G+  +  VS++L+ AY     +  A +   +   R+
Sbjct: 168 LKACTVGSDLGFTPQVHAQAVKLEGLF-DPYVSSSLVEAYVSCGEVDVAERALLDSPVRS 226

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
            ++WN L+N +  +G   + +  F +L+ S     +YTL   L  C  +   + G+ +HG
Sbjct: 227 DVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHG 286

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            V+K  L +   L N +I +Y+KC   + +  VF  + E D +  + +IS + +H    E
Sbjct: 287 LVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPE 346

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           A   F  M D+G +KP+Q TF  +    S  G V+
Sbjct: 347 AFDIFMQMSDMG-VKPNQYTFVGLAIVASRTGDVN 380



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 21/223 (9%)

Query: 483 LRPDEY-TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           LR +E  + + AL  CA   +LR GK +H  +L++       L ++++ +Y KCG L  +
Sbjct: 55  LRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADA 114

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF+ M  +D ++W A++SA    G+   A+  F  M + G + P+     A L AC+ 
Sbjct: 115 RSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEG-VVPNGFALAAALKACTV 173

Query: 602 AGLVDDGTRIFDSMVNDYG-FIP------AEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
              +    ++    V   G F P       E ++SC        G +D AER +    + 
Sbjct: 174 GSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSC--------GEVDVAERALLDSPV- 224

Query: 655 ARSD-NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
            RSD +W AL +  A  G+     ++   L+E   D+ S Y L
Sbjct: 225 -RSDVSWNALLNEYARDGDYAKVMLVFDKLVE-SGDEISKYTL 265


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 303/579 (52%), Gaps = 41/579 (7%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--- 247
           F  +L  C A   L  G+ LHSL  KS         N  I +Y  CG +  A K F+   
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 248 ----------------EAKGYVC----------DHISYNVMMDGLASVGRVEEALIRFRD 281
                           E++  +           D +SYN ++   A  G    AL  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 282 MLVASLRPSELTFVSVMSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
           M    L     T  +V++AC C  VG   Q+H+ A+ SGF++Y SV+NA +T Y   G +
Sbjct: 131 MREMGLDMDXFTLSAVITAC-CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 340 DEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           D+A  +F  +   +D VSWN+MI  Y Q   G  A+  + EM   G+  D FT  S+L +
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 399 SGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIIT 454
              +E +      H  +   G   N  V + LI  Y+K    +    ++F  ++  +++ 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 455 WNTLINGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           WNT+++G+  N  F    L+ F ++     RP++ +    +S+C+ +SS   GKQIH   
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 514 LKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           LK+++ S ++S+ NA+I +Y+KCG+L  + R+F+ M E +T+S N++I+ YAQHG   E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F+ M +  +I P   TF +VLSAC+H G V++G   F+ M   +   P  +H SCM+
Sbjct: 430 LHLFQWMLER-QIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGRAG L EAE +I        S  W +L  AC  HGN+ L    A  +L+ E    +
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YV+LSN+YA+AG WEE A +R+ ++  GV K+PGCSWI
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 271/547 (49%), Gaps = 20/547 (3%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C   R+ + G  LH+  +++ +    + +N  + LY     L   ++ F +I +P+V
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +S+   ++A  K      A ++FD++P+ DL  YN +I+   + G     +GLF  M ++
Sbjct: 75  FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134

Query: 184 DVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +  D ++ ++V++ C  D GL+    QLHS+   SGF   VSV NAL+T Y   G++ D
Sbjct: 135 GLDMDXFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF    G + D +S+N M+          +AL  F++M+   L     T  SV++A 
Sbjct: 192 AKRVF-YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSW 357
            C      G Q H Q +K+GF   + V +  I +YS CG     C  +F  + E D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 358 NTMISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVF 413
           NTM+S Y+Q       A+  + +MQ +G RP++ +F  ++++   +      + IH+   
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 414 INGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            + I +N I V NALI+ Y+K   ++ A ++F  M+  N ++ N++I G+  +G  ++ L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITL 531
             F  +L  ++ P   T    LS+CA    +  G      +  K N+  +    + MI L
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 532 YAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
             + G L +    +  M     +I W +L+ A   HG  + AV   KA   V +++P  A
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAV---KAANQVLQLEPSNA 547

Query: 591 TFTAVLS 597
               VLS
Sbjct: 548 APYVVLS 554



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 60/440 (13%)

Query: 35  GHYQD---ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           G +Q+   AL LF ++     L  D+++L++ L A   L + + G Q H   ++ G    
Sbjct: 216 GQHQEGSKALGLFQEM-VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274

Query: 92  PHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
            HV + ++ LY K    +   ++VF EI  PD+  W                        
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW------------------------ 310

Query: 151 DRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                  N M++G ++N  + +  +  FR+M  +  R ++ SF  V+S C +      G+
Sbjct: 311 -------NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGK 363

Query: 209 QLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           Q+HSL  KS   S  +SV NALI MY  CGN+ DA ++F+    +  + +S N M+ G A
Sbjct: 364 QIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH--NTVSLNSMIAGYA 421

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGF--EAY 322
             G   E+L  F+ ML   + P+ +TF+SV+SAC    RV  G+  +   MK  F  E  
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPE 480

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYL 378
               +  I +    GK+ EA  + AR+      + W +++    T+    L   A    L
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVS---NALISA 430
           +++     P      ++ AS+G  E V  +  F+   G+        I+V    +  ++ 
Sbjct: 541 QLEPSNAAP-YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAE 599

Query: 431 YAKNERIKQAYQIFHNMSPR 450
            + +  IK+ Y+    MS +
Sbjct: 600 DSSHPMIKEIYEFLEEMSGK 619


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 189/554 (34%), Positives = 296/554 (53%), Gaps = 21/554 (3%)

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F S+L +C A   L  GR +H+ +   G S       AL  MY  C    DA +VF+  
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEAL---IRFRDMLVASLRPSELTFVSVMSACLCPRV 306
                D +++N ++ G A  G  E A+   +R ++      RP  +T VSV+ AC   + 
Sbjct: 287 PAR--DRVAWNALVAGYARNGLAEAAVGMVVRMQEE--DGERPDAVTLVSVLPACADAQA 342

Query: 307 ---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
                +VHA A++ GF+   +VS A + +Y  CG +D A  +F  +Q+++ VSWN MI  
Sbjct: 343 LGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKG 402

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS------GFIEMVEMIHAFVFINGI 417
           YA+      A+  +  M   G+   + T  S+LA+       GF++    +H  +   G+
Sbjct: 403 YAENGDATEALALFKRMVGEGV---DVTDVSVLAALHACGELGFLDEGRRVHELLVRIGL 459

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +N+ V NALI+ Y K +R   A Q+F  +  +  ++WN +I G   NG     ++ FS 
Sbjct: 460 ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSR 519

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           + +  ++PD +TL   + + A IS     + IHGY ++ +L   + +  A+I +YAKCG 
Sbjct: 520 MQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 579

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +  +  +FN   ++  I+WNA+I  Y  HG GK AV  F+ M+  G++ P++ TF +VLS
Sbjct: 580 VSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV-PNETTFLSVLS 638

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSHAGLVD+G   F SM  DYG  P  +H   M+DLLGRAG L EA   I    ++   
Sbjct: 639 ACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGI 698

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             + A+  AC  H N+ L    A  + E E ++   +VLL+NIYA A LW++ A +R  +
Sbjct: 699 SVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAM 758

Query: 718 KRTGVIKQPGCSWI 731
           ++ G+ K PG S +
Sbjct: 759 EKKGLQKTPGWSIV 772



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 162/601 (26%), Positives = 268/601 (44%), Gaps = 54/601 (8%)

Query: 29  ANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           A  SRS   + AL  F  +  +    P + + ++ L  CA   + A G  +HA     GL
Sbjct: 198 AAASRS-DLRGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGL 256

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
                 A  + ++Y   R     +RVF                               D+
Sbjct: 257 SPEALAATALANMYAKCRRPGDARRVF-------------------------------DR 285

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVLSVC-DAGLLEF 206
           MP RD   +NA++ G   NG  +  +G+   M + D  R D  +  SVL  C DA  L  
Sbjct: 286 MPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGA 345

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            R++H+   + GF   V+V  A++ +Y  CG V  A KVF+  +    + +S+N M+ G 
Sbjct: 346 CREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDR--NSVSWNAMIKGY 403

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGY-----QVHAQAMKSGFE 320
           A  G   EAL  F+ M+   +   ++T VSV++A   C  +G+     +VH   ++ G E
Sbjct: 404 AENGDATEALALFKRMVGEGV---DVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLE 460

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  +V NA ITMY  C + D A  +F  L  K  VSWN MI    Q      A+  +  M
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRM 520

Query: 381 QSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q   ++PD FT  S++ +   I        IH +     +  ++ V  ALI  YAK  R+
Sbjct: 521 QLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRV 580

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  +F++   R++ITWN +I+G+  +G     ++ F E+  S   P+E T    LS+C
Sbjct: 581 SIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSAC 640

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
           +    +  G++    + ++  L   M     M+ L  + G L  +      M  +  IS 
Sbjct: 641 SHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISV 700

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDS 614
           + A++ A   H   K      ++ Q +  ++P++  +  +L+   ++A L  D  R+  +
Sbjct: 701 YGAMLGACKLH---KNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTA 757

Query: 615 M 615
           M
Sbjct: 758 M 758



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 185/386 (47%), Gaps = 37/386 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +R+G  + A+ + V++      +PD  +L + L ACA+ +      ++HA+A+
Sbjct: 295 NALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAV 354

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G     +V+  IL +Y     + S ++VF  +Q+ +  SW                  
Sbjct: 355 RGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSW------------------ 396

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                        NAMI G  ENG     + LF+ M    V   + S  + L  C + G 
Sbjct: 397 -------------NAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ GR++H L+ + G    V+V+NALITMY  C     A +VF+E  GY    +S+N M+
Sbjct: 444 LDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDEL-GYK-TRVSWNAMI 501

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G    G  E+A+  F  M + +++P   T VS++ A      P     +H  +++   +
Sbjct: 502 LGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLD 561

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ CG++  A  +F   +++ +++WN MI  Y     G+ A+  + EM
Sbjct: 562 QDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEM 621

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE 406
           +S G  P+E TF S+L++     +V+
Sbjct: 622 KSSGKVPNETTFLSVLSACSHAGLVD 647


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  321 bits (823), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 205/652 (31%), Positives = 332/652 (50%), Gaps = 22/652 (3%)

Query: 95  ANTILSLYKNARDLVSVKRVFSEI----QNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
           +N   SL    + + S++++ + +     + D+   T  +S     GHV+ A  +FD++ 
Sbjct: 39  SNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIR 98

Query: 151 DRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
           + DL  +  MI     N  Y +I       + K     DN  F+ VL  C +    + GR
Sbjct: 99  NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 158

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHISYNVMMDGL 266
           +LH  + K G S    V+  L+ MY  C  V D+ +VF+E   +  VC    +  M+ G 
Sbjct: 159 KLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVC----WTSMIVGY 213

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
                ++E L+ F  M    +  ++ T  S+++AC        G  VH   +KSGF+  +
Sbjct: 214 VQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNS 273

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            +    + +Y  CG I +A  +F  L   D+VSW  MI  YAQR   R A+  + + +  
Sbjct: 274 FLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWK 333

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            + P+  T  S+L   A +G + M   +H      G   +    NAL+  YAK   I  A
Sbjct: 334 DLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGS-EDATFENALVDMYAKCHMIGDA 392

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  +  +++I WN++I+G+  NG+  + L+ F ++    + PD  TL   LS+CA +
Sbjct: 393 RYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASV 452

Query: 501 SSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            + R G  +HGY +K  L+S  + +G A++  YAKCGD + +  +F+ M EK+TI+W+A+
Sbjct: 453 GAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAM 512

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I  Y   G+   ++  F  M    +++P++  FT +LSACSH+G++ +G R F++M   Y
Sbjct: 513 IGGYGIQGDCSRSLELFGDMLK-EKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVY 571

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
            F+P+  H +CM+DLL RAG L+EA   I    IQ       A    C  H    LG + 
Sbjct: 572 NFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVA 631

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              +LE   DK   YVL+SN+YA+ G W +A  + EL+K+ G+ K PG S +
Sbjct: 632 VRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLV 683



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 250/548 (45%), Gaps = 48/548 (8%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
            S  L AC+ LR    G +LH   ++ G      V   ++ +Y   R++   +RVF EI 
Sbjct: 141 FSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEIL 199

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + +V  WT+                               MI G  +N     G+ LF  
Sbjct: 200 DRNVVCWTS-------------------------------MIVGYVQNDCLKEGLVLFNR 228

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  V  + Y+  S+++ C   G L  G+ +H  V KSGF     +V  L+ +YF CG+
Sbjct: 229 MREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGD 288

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA  VF+E      D +S+  M+ G A  G   EAL  F D     L P+ +T  SV+
Sbjct: 289 IRDAFSVFDELS--TIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVL 346

Query: 299 SACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           SAC       +G  VH   +K G E  T   NA + MY+ C  I +A  +F  + +KD++
Sbjct: 347 SACAQTGSLNMGRSVHCLGIKLGSEDAT-FENALVDMYAKCHMIGDARYVFETVFDKDVI 405

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
           +WN++IS Y Q      A+  + +M+S  + PD  T  S+L   AS G   +   +H + 
Sbjct: 406 AWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYA 465

Query: 413 FINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
              G+++ ++ V  AL++ YAK    + A  IF  M  +N ITW+ +I G+ + G   + 
Sbjct: 466 IKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRS 525

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMIT 530
           L+ F ++L  +L P+E   +  LS+C+    L  G +    + +  N +  M     M+ 
Sbjct: 526 LELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVD 585

Query: 531 LYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           L A+ G L+ +L     + I+ D     A +     H          + M +   + PD+
Sbjct: 586 LLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLE---LHPDK 642

Query: 590 ATFTAVLS 597
           A +  ++S
Sbjct: 643 ACYYVLMS 650



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 195/452 (43%), Gaps = 52/452 (11%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           Y+L + + AC  L     G  +H Y +++G      +   +L LY    D+     VF E
Sbjct: 239 YTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDE 298

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           +   D+ SWT                               AMI G  + GY    + LF
Sbjct: 299 LSTIDLVSWT-------------------------------AMIVGYAQRGYPREALKLF 327

Query: 178 REMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
            +    D+  +  + +SVLS C   G L  GR +H L  K G S   +  NAL+ MY  C
Sbjct: 328 TDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG-SEDATFENALVDMYAKC 386

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
             + DA  VFE    +  D I++N ++ G    G   EAL  F  M   S+ P  +T VS
Sbjct: 387 HMIGDARYVFETV--FDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVS 444

Query: 297 VMSACLCP---RVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           V+SAC      RVG  +H  A+K+G       V  A +  Y+ CG  + A +IF  + EK
Sbjct: 445 VLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEK 504

Query: 353 DIVSWNTMISTYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEM 407
           + ++W+ MI  Y  Q +  RS  L + +M    + P+E  F ++L++   SG + E    
Sbjct: 505 NTITWSAMIGGYGIQGDCSRSLEL-FGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRY 563

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
            +    +   + +++    ++   A+  R+++A      +     I  +  + G  L+G 
Sbjct: 564 FNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIP----IQPDVSLLGAFLHGC 619

Query: 468 PVQGLQHFSELL---MSELRPDEYTLSVALSS 496
            +       E+    M EL PD+    V +S+
Sbjct: 620 RLHSRFDLGEVAVRRMLELHPDKACYYVLMSN 651



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +++G+  +AL LF Q+ S   + PD  +L + L+ACA++     G+ LH
Sbjct: 404 VIAWNSIISGYTQNGYAYEALELFDQMRSD-SVYPDAITLVSVLSACASVGAYRVGSSLH 462

Query: 81  AYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            YA++AG L    +V   +L+ Y    D  S + +F E+   +  +W+  +      G  
Sbjct: 463 GYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDC 522

Query: 140 DYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
             + E+F  M    L     ++  +++ C+ +G    G   F  M
Sbjct: 523 SRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTM 567


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 204/689 (29%), Positives = 344/689 (49%), Gaps = 46/689 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            KPD       L  C++ +N   G ++H +    G +    V   ++ +Y     +   +
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +VF  ++  DV++WT                        R + +Y      C +  Y D 
Sbjct: 61  QVFEILERKDVFAWT------------------------RMIGIY------CQQGDY-DR 89

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +G+F +M + DV     ++ ++L+ C     L+ G ++H  + + GF   V V  ALI 
Sbjct: 90  ALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALIN 149

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR--FRDMLVASLRP 289
           MY  CG+V  A   F+  +    D +S+  M+   A V   + AL R  +R M +  + P
Sbjct: 150 MYNKCGSVRGAWDSFKRLEHR--DVVSWTAMI--AACVQHDQFALARWLYRRMQLDGVVP 205

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +++T  +V +A   P     G  +++       E+   V N+A+ M+ + G + +A  +F
Sbjct: 206 NKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLF 265

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             + ++D+V+WN +I+ Y Q      A+  +  +Q  GI+ ++ TF  +L    S   + 
Sbjct: 266 EDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLA 325

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             ++IH  V   G   ++ V+ AL+S Y + E   QA++IF +M  +++ITW  +   + 
Sbjct: 326 KGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYA 385

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NGF  + LQ F E+ +   RP   TL   L +CA +++L+ G+QIH ++++N    +M 
Sbjct: 386 QNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMV 445

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +  A+I +Y KCG +  +  VF  M ++D + WN+++ AYAQHG   E +  F  MQ  G
Sbjct: 446 VETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDG 505

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             K D  +F +VLSA SH+G V DG + F +M+ D+   P  +   C++DLLGRAG + E
Sbjct: 506 E-KADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQE 564

Query: 644 A-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           A + V+           W  L  AC  H      +  A  +LER+      YV+LSN+YA
Sbjct: 565 AVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYA 624

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AAG W+    +R+L++  GV K+PG S I
Sbjct: 625 AAGDWDGVNRMRKLMRSRGVKKEPGRSSI 653



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 140/632 (22%), Positives = 271/632 (42%), Gaps = 53/632 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G Y  AL +F Q+     + P   +    L ACA+  +   G ++H   L+ G +   
Sbjct: 83  QQGDYDRALGMFYQMQEE-DVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   ++++Y     +      F  +++ DV SWT  ++AC +  H  +A          
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQ--HDQFA---------- 189

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
                              +   L+R M    V  +  +  +V +   D   L  G+ ++
Sbjct: 190 -------------------LARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIY 230

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           SLV+       V V+N+ + M+ N G + DA ++FE+      D +++N+++        
Sbjct: 231 SLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDR--DVVTWNIVITFYVQNEN 288

Query: 272 VEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA 328
             EA+  F  +    ++ +++TFV   +V ++      G  +H    ++G++    V+ A
Sbjct: 289 FGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATA 348

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +++Y  C    +A  IF  +  KD+++W  M   YAQ    + A+  + EMQ  G RP 
Sbjct: 349 LMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPT 408

Query: 389 EFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  ++L +   +  ++    IH+ +  NG    + V  ALI+ Y K  ++ +A  +F 
Sbjct: 409 SATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFE 468

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M+ R+I+ WN+++  +  +G+  + LQ F+++ +   + D  +    LS+ +   S+  
Sbjct: 469 KMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTD 528

Query: 506 GKQIHGYVLKNNLISKM-SLGNAMITLYAKCGDL----DCSLRVFNMMIEKDTISWNALI 560
           G Q    +L++  I+    L   ++ L  + G +    D  L++   +   D I W  L+
Sbjct: 529 GYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCL--PDGILWMTLL 586

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
            A   H +  +A +   A + V    P  +    VLS    A    DG      ++   G
Sbjct: 587 GACRTHNKTDQAKA---AAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRG 643

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
                   S  +++L R     E +R    +H
Sbjct: 644 VKKEPGRSS--IEILNRVHEFLEGDRSHPRRH 673



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +++G  ++AL LF ++    + +P   +L   L  CA+L     G Q+H++ +  G +  
Sbjct: 385 AQNGFRKEALQLFQEMQLEGR-RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRME 443

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
             V   ++++Y     +   + VF ++   D+  W + L A  + G+ D   ++F++M
Sbjct: 444 MVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQM 501


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 213/683 (31%), Positives = 348/683 (50%), Gaps = 46/683 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           ++S+ ++ C +L N   G Q+  + ++ GL+    VAN+++S++                
Sbjct: 133 TMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMF---------------- 176

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                             G V+ AC VF  M + D   +N+MI     NG     +  F 
Sbjct: 177 ---------------GYFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFS 221

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
            M ++    ++ + +++L+ C +   L++GR +HSLV K G++  V   N LITMY + G
Sbjct: 222 WMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAG 281

Query: 238 NVVDACKVFEEAKGYV-CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
              DA  VF+   G V  D IS+N MM   A  G   +AL     M       + +TF S
Sbjct: 282 RCEDAELVFQ---GMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTS 338

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            ++AC  P     G  +HA  +  G      V NA +T+Y+  G + EA  +F  + ++D
Sbjct: 339 ALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRD 398

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT----FGSLLASSGFIEMVEMIH 409
            V+WN +I  +A       A+ A+  M+  G+  +  T     G+ LA +  +E    IH
Sbjct: 399 GVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIH 458

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           AF+ + G  ++  V N+LI+ YAK   +  +  IF  ++ +N   WN ++     +G   
Sbjct: 459 AFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHME 518

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + L+   E+  + +  DE++ S  L++ A+++ L  G+Q+HG  +K    S   + +A +
Sbjct: 519 EALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATM 578

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y KCG++D  LR+    I +  +SWN L S++++HG  ++A   F  M ++G +KPD 
Sbjct: 579 DMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLG-VKPDH 637

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVI 648
            TF ++LSACSH G+V++G   +DSM+ ++G IPA+  H  C++DLLGR+G   EAE  I
Sbjct: 638 VTFVSLLSACSHGGMVEEGLAYYDSMIKEFG-IPAKIGHCVCIIDLLGRSGRFAEAETFI 696

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
               +      W +L +AC  HGNL LGR     LL+ +    S YVL SNI A  G WE
Sbjct: 697 KEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWE 756

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +   IR  +    + K+P CSW+
Sbjct: 757 DVEKIRRQMGLNKIKKKPACSWV 779



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 182/654 (27%), Positives = 320/654 (48%), Gaps = 48/654 (7%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF-GNQLHAYALRA 86
           ++   R+G Y++++  F ++     +KP   ++++ + AC         G Q+H + ++ 
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRD-FGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKV 59

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           GL +   V  +++ LY N        +VF E+   +V SWT  + A     +VDY     
Sbjct: 60  GLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVA-----YVDY----- 109

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE- 205
                                G   + + ++R M    +  ++ + +SV+S C +   E 
Sbjct: 110 ---------------------GEPSMVMNIYRRMRSEGMSCNDNTMSSVISTCVSLENEL 148

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G Q+   V K G    VSV N+LI+M+   G+V +AC VF     +  D IS+N M+  
Sbjct: 149 LGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACYVFSGMDEH--DTISWNSMIAA 206

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
               G  +E+L  F  M       +  T  ++++ C      + G  +H+  +K G+ + 
Sbjct: 207 YIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSN 266

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
              SN  ITMYS  G+ ++A ++F  + EKD++SWN+M++ YAQ      A+     M  
Sbjct: 267 VCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFY 326

Query: 383 VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           +    +  TF S LA+    E     +++HA V   G+  N+ V NAL++ YAK+  + +
Sbjct: 327 MRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIE 386

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY-TLSVALSSC- 497
           A ++F  M  R+ +TWN LI G   +  P + L+ F +L+  E  P  Y T+S  L +C 
Sbjct: 387 AKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAF-KLMREEGVPINYITISNVLGACL 445

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A    L HG  IH +++     S   + N++IT+YAKCGDL+ S  +F+ +  K+  +WN
Sbjct: 446 APNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWN 505

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           A+++A A HG  +EA+     M+  G +  D+ +F+  L+A +   ++++G ++    V 
Sbjct: 506 AMMAANAHHGHMEEALKFLLEMRRAG-VNVDEFSFSECLAAAAKLAILEEGQQLHGLAVK 564

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             G        S  +D+ G+ G +D+  R+I  + I     +W  L S+ + HG
Sbjct: 565 -LGCDSNPFVASATMDMYGKCGEIDDVLRII-PRPINRSRLSWNILTSSFSRHG 616



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 214/449 (47%), Gaps = 14/449 (3%)

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR----VGYQVHAQAMKSG 318
           M G    G   E++  F +M    ++PS +   S+++AC         G QVH   +K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
             +   V  + + +Y + G   +A  +F  +  K++VSW  ++  Y         +  Y 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M+S G+  ++ T  S++++   +E   +   +   V   G+ TN+ V+N+LIS +    
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +++A  +F  M   + I+WN++I  ++ NG   + L+ FS +       +  TLS  L+
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C  + +L+ G+ IH  VLK    S +   N +IT+Y+  G  + +  VF  M+EKD IS
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMIS 300

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WN++++ YAQ G   +A+     M  + R   +  TFT+ L+ACS      +G +I  ++
Sbjct: 301 WNSMMACYAQDGNCLDALKLLATMFYMRR-GANYVTFTSALAACSDPEFATEG-KILHAL 358

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGNLR 674
           V   G        + ++ L  ++G + EA++V   Q +  R    W AL    A   +  
Sbjct: 359 VIHVGLHENVIVGNALVTLYAKSGLMIEAKKVF--QTMPKRDGVTWNALIGGHA--DSEE 414

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
               +    L RE+  P  Y+ +SN+  A
Sbjct: 415 PDEALKAFKLMREEGVPINYITISNVLGA 443



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 34/225 (15%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           GH ++AL   +++  +  +  D +S S  LAA A L     G QLH  A++ G  + P V
Sbjct: 515 GHMEEALKFLLEMRRA-GVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFV 573

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           A+  + +Y    ++  V R+     N    SW    S+ ++ G  + A E          
Sbjct: 574 ASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKET--------- 624

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH-S 212
                                 F EM  L V+ D+ +F S+LS C   G++E G   + S
Sbjct: 625 ----------------------FHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDS 662

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           ++ + G    +     +I +    G   +A    +E      DH+
Sbjct: 663 MIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHV 707


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 207/606 (34%), Positives = 311/606 (51%), Gaps = 78/606 (12%)

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           C +  L++ RQL   +++       ++V+     Y   G++  A  VFEE    + D + 
Sbjct: 60  CKSSELDYARQLFDEISEPDKIARTTMVSG----YCASGDIALARSVFEETPVSMRDTVM 115

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQA 314
           YN M+ G +       A+  F  M     +P + T+ SV++         +   Q HA A
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAA 175

Query: 315 MKSGFEAYTSVSNAAITMYSSCGK----IDEACMIFARLQEKDIVSWNTMISTYAQR--- 367
           +KSG    TSVSNA +++YS C      +  A  +F  + EKD  SW TM++ Y +    
Sbjct: 176 LKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCF 235

Query: 368 NLGRS---------AILAY----------------LE----MQSVGIRPDEFTFGSLL-- 396
           +LG+           ++AY                LE    M S GI  DEFT+ S++  
Sbjct: 236 DLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRA 295

Query: 397 -ASSGFIEMVEMIHAFV---------FINGIIT---------------------NIQVSN 425
            A++  +++ + +HA+V         F N ++T                     ++   N
Sbjct: 296 CANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWN 355

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+S Y  +  I +A  IF  M  +NI++W  +I+G   NGF  +GL+ FS +      P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            +Y  S A+ SCA + +  +G+Q H  ++K    S +S GNA+IT+YAKCG ++ + +VF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVF 475

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M   D++SWNALI+A  QHG G EAV  ++ M   G I+PD+ TF  VL+ACSHAGLV
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKG-IRPDRITFLTVLTACSHAGLV 534

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           D G + F+SM   Y   P  DH + ++DLL R+G   EAE +I S   +  ++ W AL S
Sbjct: 535 DQGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLS 594

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
            C  HGN+ LG I A  L     +    Y+LLSN+YAA G WEE A +R+L++  GV K+
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKE 654

Query: 726 PGCSWI 731
             CSWI
Sbjct: 655 VACSWI 660



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 170/670 (25%), Positives = 284/670 (42%), Gaps = 126/670 (18%)

Query: 61  STTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +  L  C  LR  +      +H   +  G + + H+ N ++ +Y  + +L   +++F EI
Sbjct: 16  AANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEI 75

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGL 176
             PD  + TT +S     G +  A  VF++ P   RD  +YNAMITG + N      I L
Sbjct: 76  SEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINL 135

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLL------EFGRQLHSLVTKSGFSCLVSVVNALI 230
           F +M     + D++++ASVL    AGL       +   Q H+   KSG   + SV NAL+
Sbjct: 136 FCKMKHEGFKPDDFTYASVL----AGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALV 191

Query: 231 TMYFNCGN----VVDACKVFEEAK------------GYVCDH------------------ 256
           ++Y  C +    +  A KVF++              GYV +                   
Sbjct: 192 SVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKL 251

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQ 313
           ++YN M+ G  + G  +EAL   R M+ + +   E T+ SV+ AC   R   +G QVHA 
Sbjct: 252 VAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAY 311

Query: 314 AMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY-------- 364
            ++   E ++    N+ +T+Y  CGK +EA  IF ++  KD+VSWN ++S Y        
Sbjct: 312 VLRR--EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369

Query: 365 -----------------------AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
                                  A+   G   +  +  M+  G  P ++ F   + S   
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429

Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +      +  HA +   G  +++   NALI+ YAK   +++A Q+F  M   + ++WN L
Sbjct: 430 LGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNAL 489

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I     +G  V+ +  + E+L   +RPD  T    L++C+    +  G++          
Sbjct: 490 IAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYF-------- 541

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                  N+M T+Y                I      +  LI    + G+  EA S  ++
Sbjct: 542 -------NSMETVY---------------RIPPGADHYARLIDLLCRSGKFSEAESIIES 579

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLGR 637
           +      KP    + A+LS C   G ++ G    D +   +G IP  D    +L ++   
Sbjct: 580 LP----FKPTAEIWEALLSGCRVHGNMELGIIAADKL---FGLIPEHDGTYMLLSNMYAA 632

Query: 638 AGYLDEAERV 647
            G  +E  RV
Sbjct: 633 TGQWEEVARV 642



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 221/489 (45%), Gaps = 52/489 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA-NLRNAAFGNQLHAYA 83
           N  +   S +     A++LF ++      KPD ++ ++ LA  A  + +     Q HA A
Sbjct: 117 NAMITGFSHNNDGYSAINLFCKM-KHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAA 175

Query: 84  LRAGLKAYPHVANTILSLYKNARD----LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           L++G      V+N ++S+Y         L S ++VF +I   D  SWTT ++   K G  
Sbjct: 176 LKSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCF 235

Query: 140 DYACEVFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           D   E+   M +   L  YNAMI+G    G     + + R M    +  D +++ SV+  
Sbjct: 236 DLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRA 295

Query: 199 C-DAGLLEFGRQLHSLV-TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK------ 250
           C +A LL+ G+Q+H+ V  +  FS      N+L+T+Y+ CG   +A  +FE+        
Sbjct: 296 CANARLLQLGKQVHAYVLRREDFS--FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS 353

Query: 251 ------GYVCD-HI----------------SYNVMMDGLASVGRVEEALIRFRDMLVASL 287
                 GYV   HI                S+ +M+ GLA  G  EE L  F  M     
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P +  F   + +C        G Q HAQ +K GF++  S  NA ITMY+ CG ++EA  
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQ 473

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F  +   D VSWN +I+   Q   G  A+  Y EM   GIRPD  TF ++L +     +
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGL 533

Query: 405 VEMIHAFVFINGIITNIQVSNA------LISAYAKNERIKQAYQIFHNMSPRNIIT-WNT 457
           V+      + N + T  ++         LI    ++ +  +A  I  ++  +     W  
Sbjct: 534 VD--QGRKYFNSMETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEA 591

Query: 458 LINGFLLNG 466
           L++G  ++G
Sbjct: 592 LLSGCRVHG 600



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 148/282 (52%), Gaps = 5/282 (1%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++     G YQ+AL +  ++ SS  ++ D ++  + + ACAN R    G Q+H
Sbjct: 251 LVAYNAMISGYVNCGLYQEALEMVRRMVSS-GIELDEFTYPSVIRACANARLLQLGKQVH 309

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           AY LR    ++ H  N++++LY         + +F ++   D+ SW   LS     GH+ 
Sbjct: 310 AYVLRREDFSF-HFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F +M ++++  +  MI+G  ENG+ + G+ LF  M +      +Y+F+  +  C 
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G    G+Q H+ + K GF   +S  NALITMY  CG V +A +VF        D +S+
Sbjct: 429 VLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP--CLDSVSW 486

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           N ++  L   G   EA+  + +ML   +RP  +TF++V++AC
Sbjct: 487 NALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC 528



 Score = 47.0 bits (110), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 53/276 (19%), Positives = 116/276 (42%), Gaps = 45/276 (16%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           + Y  ++ L    R +SL+  + +HG ++         + N +I +Y K  +LD + ++F
Sbjct: 13  NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLF 72

Query: 546 NMMIE---------------------------------KDTISWNALISAYAQHGEGKEA 572
           + + E                                 +DT+ +NA+I+ ++ + +G  A
Sbjct: 73  DEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSA 132

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD----SMVNDYGFIPA-EDH 627
           ++ F  M+  G  KPD  T+ +VL+    A +VDD  +       ++ +  G++ +  + 
Sbjct: 133 INLFCKMKHEG-FKPDDFTYASVLAGL--ALVVDDEKQCVQFHAAALKSGAGYVTSVSNA 189

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR-IIAGLLLER 686
           L  +      +  L  + R +     +    +W  + +    +G   LG+ ++ G+    
Sbjct: 190 LVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGM---D 246

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           E  K   Y  + + Y   GL++EA  +   +  +G+
Sbjct: 247 ENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGI 282


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 194/643 (30%), Positives = 331/643 (51%), Gaps = 42/643 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +  G +  AL  + ++     L PD Y+    + AC  L + A G  +H    
Sbjct: 116 NWMIRGFTMMGQFDFALLFYFKMLGCGTL-PDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    V ++++  Y                               ++ G +  A  
Sbjct: 175 FMGFELDVFVGSSLIKFY-------------------------------SENGCIHDARY 203

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD+MP +D  ++N M+ G  +NG  D   G+F EM + +   ++ +FA VLSVC + ++
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263

Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FG QLH LV  SG      V N L+ MY  CG++ DA ++F+       D +++N M+
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPK--TDLVTWNGMI 321

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVS---VMSACLCPRVGYQVHAQAMKSGFE 320
            G    G ++EA   F +M+ A ++P  +TF S   ++S     R G ++H   +++G  
Sbjct: 322 SGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVS 381

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + +A I +Y  C  ++ A  IF +    DIV    MIS Y    +  +A+  +  +
Sbjct: 382 LDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 441

Query: 381 QSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
               +R +  T  S+L A +G   + + + +H  +  NG   +  V +A++  YAK  ++
Sbjct: 442 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKL 501

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A+Q F  +S ++ + WN++I     NG P + +  F ++ M+  + D  ++S ALS+C
Sbjct: 502 DLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 561

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + +L +GK+IH ++++    S +   +A+I +Y+KCG+LD + RVF+MM EK+ +SWN
Sbjct: 562 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWN 621

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+AY  HG  K++++ F  M   G I+PD  TF A++SAC HAG VD+G   F  M  
Sbjct: 622 SIIAAYGNHGRLKDSLNLFHGMLGDG-IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTE 680

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           + G +   +H +CM+DL GRAG L+EA  +INS      +  W
Sbjct: 681 ELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 181/636 (28%), Positives = 304/636 (47%), Gaps = 48/636 (7%)

Query: 47  IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNAR 106
           IH+   L P + S+   L  C +    + G Q HA  L  G+     +   +L +Y    
Sbjct: 39  IHNDDSLAPQLVSI---LQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCG 95

Query: 107 DLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
             +  K +F +++      W   +   T MG  D+A   + KM                 
Sbjct: 96  AFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKM----------------- 138

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVS 224
                +G G            D Y+F  V+  C  GL  +  GR +H  +   GF   V 
Sbjct: 139 -----LGCGTLP---------DKYTFPYVIKAC-GGLNSVALGRVVHDKIQFMGFELDVF 183

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V ++LI  Y   G + DA  +F+       D + +NVM++G    G  + A   F +M  
Sbjct: 184 VGSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241

Query: 285 ASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
               P+ +TF  V+S C   +    G Q+H   + SG E  + V+N  + MY+ CG + +
Sbjct: 242 TETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFD 301

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLAS 398
           A  +F  + + D+V+WN MIS Y Q      A   + EM S G++PD  TF S   LL+ 
Sbjct: 302 ARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSE 361

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
              +   + IH ++  NG+  ++ + +ALI  Y K   ++ A++IF   +P +I+    +
Sbjct: 362 GATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAM 421

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+G++LNG     L+ F  LL   +R +  TL+  L +CA +++L  GK++HG++LKN  
Sbjct: 422 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 481

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                +G+A++ +YAKCG LD + + F  +  KD + WN++I++ +Q+G+ +EA+  F+ 
Sbjct: 482 GGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQ 541

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M   G  K D  + +A LSAC++   +  G  I   M+    F       S ++D+  + 
Sbjct: 542 MGMAG-TKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKC 599

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           G LD A RV +    +    +W ++ +A   HG L+
Sbjct: 600 GNLDLACRVFDMME-EKNEVSWNSIIAAYGNHGRLK 634


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 164/446 (36%), Positives = 262/446 (58%), Gaps = 9/446 (2%)

Query: 294 FVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + SV++ C+     R G +VHA  +K+ +E    +    I +Y+ C  + +A  +   + 
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEMVE 406
           E+++VSW  MIS Y+QR     A+  ++EM   G  P+EFTF ++L    +SSGF ++  
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGF-QLGR 131

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH+ V      ++I V ++L+  YAK  +I +A ++F  +  R++++   +I+G+   G
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 191

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L  F  L    +R +  T +  L++ + +++L HG+Q+H +VL+  L   + L N
Sbjct: 192 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +Y+KCG L  S R+F+ M E+  ISWNA++  Y++HG G+EAV  FK M++  ++K
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY-GFIPAEDHLSCMLDLLGRAGYLDEAE 645
           PD  TF AVLS CSH G+ D G  IF  MVN   GF P  +H  C++DL GRAG ++EA 
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             I     +  +  W +L  AC  H N+ +G  +A  LLE E +    YV+LSN+YA+AG
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++   +REL+K   VIK+PG SWI
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWI 457



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 180/352 (51%), Gaps = 15/352 (4%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
            P VY  T  +    K   +  A  V D+MP+R++  + AMI+G ++ GY    + LF E
Sbjct: 42  EPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVE 101

Query: 180 MHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M       + ++FA+VL+ C +    + GRQ+HSLV K+ F   + V ++L+ MY   G 
Sbjct: 102 MLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGK 161

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + +A +VF+       D +S   ++ G A +G  EEAL  FR +    +R + +T+ SV+
Sbjct: 162 ICEARRVFDGLPER--DVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVL 219

Query: 299 SA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           +A         G QVH+  +++    Y  + N+ I MYS CG +  +  IF  + E+ ++
Sbjct: 220 TALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVI 279

Query: 356 SWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFV 412
           SWN M+  Y++  LGR A+ L  L  +   ++PD  TF ++L+  S G +E   +   + 
Sbjct: 280 SWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYE 339

Query: 413 FIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLI 459
            +N   G    I+    ++  + +  R+++A++    M   P   I W +L+
Sbjct: 340 MVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAI-WGSLL 390



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 198/434 (45%), Gaps = 53/434 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S+ G+  +ALHLFV++  S    P+ ++ +T L +C +      G Q+H+  ++  
Sbjct: 83  ISGYSQRGYASEALHLFVEMLMS-GTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 141

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +++  V +++L +Y  A  +   +RVF  +   DV S       CT             
Sbjct: 142 FESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS-------CT------------- 181

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
                      A+I+G  + G ++  + LFR + +  +R +  ++ASVL+   +GL  L+
Sbjct: 182 -----------AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTAL-SGLAALD 229

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GRQ+HS V ++     V + N+LI MY  CG++  + ++F+         IS+N M+ G
Sbjct: 230 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTV--ISWNAMLVG 287

Query: 266 LASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACL---CPRVGYQVHAQAM--KSGF 319
            +  G   EA+  F+ M   + ++P  +TF++V+S C        G ++  + +  K GF
Sbjct: 288 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 347

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAIL 375
           E         + ++   G+++EA     ++  E     W +++     +   ++G     
Sbjct: 348 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVAR 407

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISA 430
             LE++S     +     +L AS+G  + V  +   +    +I       I++   L + 
Sbjct: 408 RLLEIESENA-GNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTF 466

Query: 431 YAKNERIKQAYQIF 444
           +A +    +  ++F
Sbjct: 467 HASDRSHPRKEEVF 480


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/587 (31%), Positives = 308/587 (52%), Gaps = 14/587 (2%)

Query: 149 MPDRDLPVYNAMITGCT-ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
           M  R L  +N ++   + E  +E++ +  F  M + + + DN++    L  C +   + +
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEV-LYHFSHMFRDEEKPDNFTLPVALKACGELREVNY 59

Query: 207 GRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           G  +H  V K       + V ++LI MY  CG +++A ++F+E +    D ++++ M+ G
Sbjct: 60  GEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEK--PDIVTWSSMVSG 117

Query: 266 LASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEA 321
               G   +A+  FR M++AS + P  +T ++++SAC      R+G  VH   ++ GF  
Sbjct: 118 FEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN 177

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             S+ N+ +  Y+      EA  +F  + EKD++SW+T+I+ Y Q      A+L + +M 
Sbjct: 178 DLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMM 237

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G  P+  T   +L   A++  +E     H      G+ T ++VS AL+  Y K    +
Sbjct: 238 DDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE 297

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSC 497
           +AY +F  +  +++++W  LI+GF LNG   + ++ FS +L+ +  RPD   +   L SC
Sbjct: 298 EAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSC 357

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           + +  L   K  H YV+K    S   +G +++ LY++CG L  + +VFN +  KDT+ W 
Sbjct: 358 SELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 417

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           +LI+ Y  HG+G +A+  F  M     +KP++ TF ++LSACSHAGL+ +G RIF  MVN
Sbjct: 418 SLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVN 477

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           DY   P  +H + ++DLLGR G LD A  +               L  AC  H N  +  
Sbjct: 478 DYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAE 537

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
            +A  L E E +    Y+L+SN+Y   G WE    +R  +K+ G+ K
Sbjct: 538 TVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 584



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/543 (24%), Positives = 251/543 (46%), Gaps = 44/543 (8%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           +K  L + N  L +LSR   +++ L+ F  +    + KPD ++L   L AC  LR   +G
Sbjct: 2   TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYG 60

Query: 77  NQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
             +H +  +   L +  +V ++++ +Y     ++   R+F E++ PD+ +W++ +S   K
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G    A E F +M                              +   DV  D  +  ++
Sbjct: 121 NGSPYQAVEFFRRM------------------------------VMASDVTPDRVTLITL 150

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           +S C        GR +H  V + GFS  +S+VN+L+  Y       +A  +F+       
Sbjct: 151 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-- 208

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           D IS++ ++      G   EAL+ F DM+     P+  T + V+ AC        G + H
Sbjct: 209 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 268

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A++ G E    VS A + MY  C   +EA  +F+R+  KD+VSW  +IS +    +  
Sbjct: 269 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 328

Query: 372 SAILAY-LEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +I  + + +     RPD      +L S    GF+E  +  H++V   G  +N  +  +L
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 388

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPD 486
           +  Y++   +  A ++F+ ++ ++ + W +LI G+ ++G   + L+ F+ ++  SE++P+
Sbjct: 389 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 448

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           E T    LS+C+    +  G +I   ++ +  L   +     ++ L  + GDLD ++ + 
Sbjct: 449 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 508

Query: 546 NMM 548
             M
Sbjct: 509 KRM 511


>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 207/711 (29%), Positives = 358/711 (50%), Gaps = 81/711 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++    ++ PD + +     AC  L+ + FG  +H Y  ++GL    
Sbjct: 124 RVGLAEGALMGFVEMLKD-EIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGL---- 178

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                    Y +         VF      D+Y          K G +D A +VFD++P+R
Sbjct: 179 ---------YGDC--------VFVASSLADMYG---------KCGVLDDARKVFDEIPER 212

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS----VCDAGLLEFGR 208
           ++  +NA++ G  +NG  +  I L  +M +  V     + ++ LS    +C  G    G+
Sbjct: 213 NVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGE---GK 269

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q H++   +G      +  +++  Y   G +  A  VF+   G   D +++N+++ G   
Sbjct: 270 QSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGK--DVVTWNLLISGYVQ 327

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
            G VE+A+   + M +  L+   +T  ++MSA       ++G +V    ++  FE+   +
Sbjct: 328 QGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGL 387

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           ++  I MY+ CG I +A  +F    +KD++ WNT+++ YA+  L   A+  + EMQ   +
Sbjct: 388 ASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESV 447

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            P+  T+                                N +I +  +N ++ +A ++F 
Sbjct: 448 PPNAITW--------------------------------NLIILSLFRNGQVDEAKEMFL 475

Query: 446 NMSPRNII----TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            M    I+    +W T++NG + NG   + + +  ++  S LRP+ ++++VALS+CA ++
Sbjct: 476 QMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLA 535

Query: 502 SLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           SL  G+ +HGY+++N L  S +S+  A+I +YAKCGD+  + +VF      +   +NA+I
Sbjct: 536 SLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMI 595

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           SAYA  G  KEA+  +++++D+G IKPD  TFT VLSAC+HAG ++    IF  MV+ +G
Sbjct: 596 SAYALSGNVKEAIDLYRSLEDMG-IKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHG 654

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             P  +H   M+DLL  AG  ++A R++     +  +    +L   C       L   ++
Sbjct: 655 MEPCLEHYGLMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTCNEEHKTELVDYLS 714

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             LLE E D    YV +SN YA  G W+E   +RE++K  G+ K+PGCSWI
Sbjct: 715 RQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPGCSWI 765



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 151/660 (22%), Positives = 298/660 (45%), Gaps = 83/660 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 16  VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYG--EILQGCVYERDFHTGRQIHARILKN 73

Query: 87  G--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G       ++   ++  Y         + +FS+++  +V+SW   +    ++G  + A  
Sbjct: 74  GEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGA-- 131

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                           + G             F EM K ++  DN+   +V   C  G L
Sbjct: 132 ----------------LMG-------------FVEMLKDEIFPDNFVVPNVCKAC--GAL 160

Query: 205 E---FGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +   FGR +H  V KSG +   V V ++L  MY  CG + DA KVF+E      + +++N
Sbjct: 161 QWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPER--NVVAWN 218

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCP-RVGYQVHAQAMKS 317
            +M G    G  EEA+    DM    + P+ +T  + +SA   +C    G Q HA A+ +
Sbjct: 219 ALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVN 278

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G E    +  + +  Y   G I+ A M+F R+  KD+V+WN +IS Y Q+ L   AI   
Sbjct: 279 GLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMC 338

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKN 434
             M+   ++ D  T  +L++++   +  ++   +  +   +   ++I +++ +I  YAK 
Sbjct: 339 KLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKC 398

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             I  A ++F +   +++I WNTL+  +  +G   + L+ F E+ +  + P+  T ++ +
Sbjct: 399 GSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLII 458

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            S  R   +   K++   +  + ++  +                               +
Sbjct: 459 LSLFRNGQVDEAKEMFLQMQSSGIVPTL-------------------------------V 487

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SW  +++   Q+G  +EAV   + MQ+ G ++P+  + T  LSAC++   +  G  +   
Sbjct: 488 SWTTMMNGLVQNGCSEEAVHYLRKMQESG-LRPNVFSITVALSACANLASLHLGRSVHGY 546

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           ++ +     +    + ++D+  + G + +AE+V   +   +    + A+ SA A  GN++
Sbjct: 547 IIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSY-SELPLFNAMISAYALSGNVK 605



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 66/260 (25%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS---------------------------------- 50
           N+ + +L R+G   +A  +F+Q+ SS                                  
Sbjct: 455 NLIILSLFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQE 514

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
             L+P+++S++  L+ACANL +   G  +H Y +R                         
Sbjct: 515 SGLRPNVFSITVALSACANLASLHLGRSVHGYIIR------------------------- 549

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                +++ +  V   T  +    K G +  A +VF +    +LP++NAMI+    +G  
Sbjct: 550 -----NQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGNV 604

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHS-LVTKSGFSCLVSVVNA 228
              I L+R +  + ++ DN +F +VLS C+ AG +    ++ S +V+K G    +     
Sbjct: 605 KEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYGL 664

Query: 229 LITMYFNCGNVVDACKVFEE 248
           ++ +  + G    A ++ EE
Sbjct: 665 MVDLLASAGETEKALRLMEE 684


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 199/579 (34%), Positives = 303/579 (52%), Gaps = 41/579 (7%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--- 247
           F  +L  C A   L  G+ LHSL  KS         N  I +Y  CG +  A K F+   
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 248 ----------------EAKGYVC----------DHISYNVMMDGLASVGRVEEALIRFRD 281
                           E++  +           D +SYN ++   A  G    AL  F  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 282 MLVASLRPSELTFVSVMSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
           M    L     T  +V++AC C  VG   Q+H+ A+ SGF++Y SV+NA +T Y   G +
Sbjct: 131 MREMGLDMDGFTLSAVITAC-CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDL 189

Query: 340 DEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           D+A  +F  +   +D VSWN+MI  Y Q   G  A+  + EM   G+  D FT  S+L +
Sbjct: 190 DDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249

Query: 399 SGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIIT 454
              +E +      H  +   G   N  V + LI  Y+K    +    ++F  ++  +++ 
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309

Query: 455 WNTLINGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           WNT+++G+  N  F    L+ F ++     RP++ +    +S+C+ +SS   GKQIH   
Sbjct: 310 WNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLA 369

Query: 514 LKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           LK+++ S ++S+ NA+I +Y+KCG+L  + R+F+ M E +T+S N++I+ YAQHG   E+
Sbjct: 370 LKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMES 429

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F+ M +  +I P   TF +VLSAC+H G V++G   F+ M   +   P  +H SCM+
Sbjct: 430 LHLFQWMLER-QIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGRAG L EAE +I        S  W +L  AC  HGN+ L    A  +L+ E    +
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YV+LSN+YA+AG WEE A +R+ ++  GV K+PGCSWI
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/547 (28%), Positives = 271/547 (49%), Gaps = 20/547 (3%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C   R+ + G  LH+  +++ +    + +N  + LY     L   ++ F +I +P+V
Sbjct: 15  LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +S+   ++A  K      A ++FD++P+ DL  YN +I+   + G     +GLF  M ++
Sbjct: 75  FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134

Query: 184 DVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +  D ++ ++V++ C  D GL+    QLHS+   SGF   VSV NAL+T Y   G++ D
Sbjct: 135 GLDMDGFTLSAVITACCDDVGLIG---QLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF    G + D +S+N M+          +AL  F++M+   L     T  SV++A 
Sbjct: 192 AKRVF-YGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAF 250

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSW 357
            C      G Q H Q +K+GF   + V +  I +YS CG     C  +F  + E D+V W
Sbjct: 251 TCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW 310

Query: 358 NTMISTYAQ-RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVF 413
           NTM+S Y+Q       A+  + +MQ +G RP++ +F  ++++   +      + IH+   
Sbjct: 311 NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLAL 370

Query: 414 INGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            + I +N I V NALI+ Y+K   ++ A ++F  M+  N ++ N++I G+  +G  ++ L
Sbjct: 371 KSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESL 430

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITL 531
             F  +L  ++ P   T    LS+CA    +  G      +  K N+  +    + MI L
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490

Query: 532 YAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
             + G L +    +  M     +I W +L+ A   HG  + AV   KA   V +++P  A
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAV---KAANQVLQLEPSNA 547

Query: 591 TFTAVLS 597
               VLS
Sbjct: 548 APYVVLS 554



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 197/440 (44%), Gaps = 60/440 (13%)

Query: 35  GHYQD---ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           G +Q+   AL LF ++     L  D+++L++ L A   L + + G Q H   ++ G    
Sbjct: 216 GQHQEGSKALGLFQEM-VRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQN 274

Query: 92  PHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
            HV + ++ LY K    +   ++VF EI  PD+  W                        
Sbjct: 275 SHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLW------------------------ 310

Query: 151 DRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
                  N M++G ++N  + +  +  FR+M  +  R ++ SF  V+S C +      G+
Sbjct: 311 -------NTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGK 363

Query: 209 QLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           Q+HSL  KS   S  +SV NALI MY  CGN+ DA ++F+    +  + +S N M+ G A
Sbjct: 364 QIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH--NTVSLNSMIAGYA 421

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGF--EAY 322
             G   E+L  F+ ML   + P+ +TF+SV+SAC    RV  G+  +   MK  F  E  
Sbjct: 422 QHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWN-YFNMMKEKFNIEPE 480

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYL 378
               +  I +    GK+ EA  + AR+      + W +++    T+    L   A    L
Sbjct: 481 AEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVL 540

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVS---NALISA 430
           +++     P      ++ AS+G  E V  +  F+   G+        I+V    +  ++ 
Sbjct: 541 QLEPSNAAP-YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAE 599

Query: 431 YAKNERIKQAYQIFHNMSPR 450
            + +  IK+ Y+    MS +
Sbjct: 600 DSSHPMIKEIYEFLEEMSGK 619


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 195/612 (31%), Positives = 323/612 (52%), Gaps = 23/612 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V  A  VF  +   +   +  ++     NG+    +G +R M    +R D   F  
Sbjct: 4   KCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVV 63

Query: 195 VLSVCDAGL-LEFGRQLHSLVTKSG---FSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
            + VC +   L+ G+ LH+++ ++    F  ++    ALITMY  C ++  A K F+E  
Sbjct: 64  AIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGT--ALITMYARCRDLELARKTFDEMG 121

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS---LRPSELTFVSVMSACLCP--- 304
                 +++N ++ G +  G    AL  ++DM+  S   ++P  +TF S + AC      
Sbjct: 122 KKTL--VTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
             G ++ A+ + SG+ + + V NA I MYS CG ++ A  +F RL+ +D+++WNTMIS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
           A++     A+  +  M     +P+  TF  LL +   +E +E    IH  V  +G  +++
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 422 QVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
            + N L++ Y K +  +++A Q+F  +  R++ITWN LI  ++  G     L  F ++ +
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             + P+E TLS  LS+CA + + R GK +H  +      + + L N+++ +Y +CG LD 
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDD 419

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           ++ VF  + +K  +SW+ LI+AYAQHG  +  +  F  +   G +  D  T  + LSACS
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEG-LAADDVTMVSTLSACS 478

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H G++ +G + F SMV D+G  P   H  CM+DLL RAG L+ AE +I+       +  W
Sbjct: 479 HGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAW 538

Query: 661 WALFSACAAHGNLRLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
            +L S C  H + +    +A  L E E +D+ S   LLSN+YA AG W+   ++R+   R
Sbjct: 539 TSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWD---DVRKTRNR 595

Query: 720 TGVIKQPGCSWI 731
               K PGCS+I
Sbjct: 596 RAARKNPGCSYI 607



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/594 (24%), Positives = 281/594 (47%), Gaps = 49/594 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R+GHY++AL  + ++     L+PD       +  C++ ++   G  LHA  L   
Sbjct: 30  VAAFARNGHYREALGYYRRM-VLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88

Query: 88  LKAYPHVANT-ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           L  +  +  T ++++Y   RDL                               + A + F
Sbjct: 89  LLEFDIILGTALITMYARCRDL-------------------------------ELARKTF 117

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLSVCD-AG 202
           D+M  + L  +NA+I G + NG     + ++++M       ++ D  +F+S L  C   G
Sbjct: 118 DEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVG 177

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  GR++ +    SG++    V NALI MY  CG++  A KVF+  K    D I++N M
Sbjct: 178 DISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNR--DVIAWNTM 235

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGF 319
           + G A  G   +AL  F+ M     +P+ +TF+ +++AC        G  +H +  + G+
Sbjct: 236 ISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGY 295

Query: 320 EAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           E+   + N  + MY+ C   ++EA  +F RL+ +D+++WN +I  Y Q    + A+  + 
Sbjct: 296 ESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFK 355

Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +MQ   + P+E T  ++L++    G     + +HA +       ++ + N+L++ Y +  
Sbjct: 356 QMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCG 415

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +     +F  +  +++++W+TLI  +  +G    GL+HF ELL   L  D+ T+   LS
Sbjct: 416 SLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLS 475

Query: 496 SCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDT 553
           +C+    L+ G Q     V  + L         M+ L ++ G L+ +   + +M    D 
Sbjct: 476 ACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDA 535

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           ++W +L+S    H + K A      + ++   + + +T T + +  + AG  DD
Sbjct: 536 VAWTSLLSGCKLHNDTKRAARVADKLFEL-ESEDEHSTVTLLSNVYAEAGRWDD 588



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 230/464 (49%), Gaps = 53/464 (11%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQI--HSSHKLKPDIYSLSTTLAACANLRNAAF 75
           K+ L+  N  +A  SR+G ++ AL ++  +   S   +KPD  + S+ L AC+ + + + 
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G ++ A  + +G  +   V N ++++Y     L S ++VF  ++N DV +W T +S   K
Sbjct: 182 GREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAK 241

Query: 136 MGHVDYACEVFDKM----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
            G    A E+F +M    P  ++  +  ++T CT    ED                    
Sbjct: 242 QGAATQALELFQRMGPNDPKPNVVTFIGLLTACT--NLED-------------------- 279

Query: 192 FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV-DACKVFEEAK 250
                       LE GR +H  V + G+   + + N L+ MY  C + + +A +VFE  +
Sbjct: 280 ------------LEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLR 327

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVG 307
               D I++N+++      G+ ++AL  F+ M + ++ P+E+T  +V+SAC      R G
Sbjct: 328 TR--DVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VHA       +A   + N+ + MY+ CG +D+   +FA +++K +VSW+T+I+ YAQ 
Sbjct: 386 KAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH 445

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFI---NGIITNIQV 423
              R+ +  + E+   G+  D+ T  S L++     M+ E + +F+ +   +G+  + + 
Sbjct: 446 GHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRH 505

Query: 424 SNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLINGFLLN 465
              ++   ++  R++ A  + H+M   P + + W +L++G  L+
Sbjct: 506 FLCMVDLLSRAGRLEAAENLIHDMPFLP-DAVAWTSLLSGCKLH 548



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 159/297 (53%), Gaps = 9/297 (3%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  CG + +A  +F  ++  + VSW  +++ +A+    R A+  Y  M   G+RPD   
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 392 FG---SLLASSGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNM 447
           F     + +SS  ++  +++HA +    ++  +I +  ALI+ YA+   ++ A + F  M
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYTLSVALSSCARISSLR 504
             + ++TWN LI G+  NG     L+ + +++      ++PD  T S AL +C+ +  + 
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G++I    + +   S   + NA+I +Y+KCG L+ + +VF+ +  +D I+WN +IS YA
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           + G   +A+  F+ M      KP+  TF  +L+AC++   ++ G R     V ++G+
Sbjct: 241 KQGAATQALELFQRMGP-NDPKPNVVTFIGLLTACTNLEDLEQG-RAIHRKVKEHGY 295



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 119/222 (53%), Gaps = 4/222 (1%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A  +FH +   N ++W  ++  F  NG   + L ++  +++  LRPD    
Sbjct: 2   YGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMF 61

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            VA+  C+    L+ G+ +H  +L+  L+   + LG A+IT+YA+C DL+ + + F+ M 
Sbjct: 62  VVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMG 121

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAM--QDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +K  ++WNALI+ Y+++G+ + A+  ++ M  +    +KPD  TF++ L ACS  G +  
Sbjct: 122 KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQ 181

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           G  I    V   G+       + ++++  + G L+ A +V +
Sbjct: 182 GREIEARTVAS-GYASDSIVQNALINMYSKCGSLESARKVFD 222


>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
 gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/542 (34%), Positives = 295/542 (54%), Gaps = 16/542 (2%)

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G L  G+Q+HS V K GF  ++S+ N ++ +Y  C +   A ++F+E   +V + +++N 
Sbjct: 2   GFLREGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEM--HVRNVVTWNT 59

Query: 262 MMDGLASV------GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHA 312
           ++ GL           V      FR ML+  +    +T   ++ ACL      +G ++H 
Sbjct: 60  VICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHC 119

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K GF   + V++A + +Y  CG + EA   F  +  +D+V WN M+S YA   L   
Sbjct: 120 FIVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEE 179

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALIS 429
           A   +  MQ      D FTF S+L S G +    +   IH          ++ V++ L+ 
Sbjct: 180 ASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVD 239

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK+E I  A + F  M+ RN+++WNT++ G+   G   + ++    +   +LRPDE T
Sbjct: 240 MYAKSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEIT 299

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L+  + SC+   +     Q++ YVLKN   + +S+ NA+I  Y+K G +  +L+ FN ++
Sbjct: 300 LASIIRSCSSALTSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVL 359

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E D ++W +LI AYA H   K ++  F+ M   G + PDQ  F  VLSACSHAGLV++G 
Sbjct: 360 EPDLVTWTSLIGAYAFHSLPKNSIDTFEEMLADG-VWPDQIVFLEVLSACSHAGLVNEGL 418

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
             F S++ DY  +P  +H +C++DLLGRAG LDEA  ++NS  I   SD   A   AC  
Sbjct: 419 HYF-SLMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIGACKI 477

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           HG+++L +  A  L E E +KP  Y L+S+++A+ G W + A I +L++       PGCS
Sbjct: 478 HGDVKLAKWAAEKLFEMEPNKPVNYTLMSSVFASEGHWHDVARIHKLMRDRCGHGVPGCS 537

Query: 730 WI 731
           W+
Sbjct: 538 WM 539



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 144/553 (26%), Positives = 249/553 (45%), Gaps = 37/553 (6%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H++ ++ G      + N IL++Y   +D     R+F E+   +V +W T +     
Sbjct: 7   GKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTVICGLVD 66

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
               DY   V+                         +G   FR+M    V  D  +   +
Sbjct: 67  CRGSDYESSVY-------------------------MGFCYFRKMLLDKVGFDAITLNGL 101

Query: 196 LSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L  C +   +E GR+LH  + K GF+    V +AL+ +Y  CG V +A + F+E   Y  
Sbjct: 102 LRACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEV--YCR 159

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVH 311
           D + +NVM+   A     EEA   F+ M   +      TF S++++C       +G Q+H
Sbjct: 160 DLVLWNVMLSCYAMNCLAEEASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIH 219

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             ++K  F+    V++  + MY+    ID+A   F  +  +++VSWNTM+  Y +   G 
Sbjct: 220 GLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGDGG 279

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS-SGFIEMVEM--IHAFVFINGIITNIQVSNALI 428
            A+   + M    +RPDE T  S++ S S  +   E+  ++A+V  NG    + ++NALI
Sbjct: 280 EAMKLLIGMFQEDLRPDEITLASIIRSCSSALTSCEIMQVNAYVLKNGFHAFLSIANALI 339

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           +AY+K   I  A Q F+ +   +++TW +LI  +  +  P   +  F E+L   + PD+ 
Sbjct: 340 NAYSKGGSIAMALQCFNTVLEPDLVTWTSLIGAYAFHSLPKNSIDTFEEMLADGVWPDQI 399

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-M 547
                LS+C+    +  G      +   +++  +     +I L  + G LD +  + N M
Sbjct: 400 VFLEVLSACSHAGLVNEGLHYFSLMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSM 459

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
            I   + +  A I A   HG+ K A    + + ++   KP    +T + S  +  G   D
Sbjct: 460 SIGYSSDTLGAFIGACKIHGDVKLAKWAAEKLFEMEPNKP--VNYTLMSSVFASEGHWHD 517

Query: 608 GTRIFDSMVNDYG 620
             RI   M +  G
Sbjct: 518 VARIHKLMRDRCG 530



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 215/480 (44%), Gaps = 57/480 (11%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           K+  D  +L+  L AC  L +   G +LH + ++ G      V + ++ LY     +   
Sbjct: 90  KVGFDAITLNGLLRACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCGLVKEA 149

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           +R F E+              C                  RDL ++N M++    N   +
Sbjct: 150 RRAFDEVY-------------C------------------RDLVLWNVMLSCYAMNCLAE 178

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
              G F+ M + +   D ++F+S+L+ C   G    GRQ+H L  K  F   V V + L+
Sbjct: 179 EASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLV 238

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY    N+ DA K F+       + +S+N M+ G   +G   EA+     M    LRP 
Sbjct: 239 DMYAKSENIDDARKAFDGMAAR--NVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPD 296

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E+T  S++ +C   L      QV+A  +K+GF A+ S++NA I  YS  G I  A   F 
Sbjct: 297 EITLASIIRSCSSALTSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFN 356

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-E 406
            + E D+V+W ++I  YA  +L +++I  + EM + G+ PD+  F  +L++     +V E
Sbjct: 357 TVLEPDLVTWTSLIGAYAFHSLPKNSIDTFEEMLADGVWPDQIVFLEVLSACSHAGLVNE 416

Query: 407 MIHAFVFING--IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +H F  +    I+  ++    LI    +   + +A+ I ++MS    I +++   G  +
Sbjct: 417 GLHYFSLMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMS----IGYSSDTLGAFI 472

Query: 465 NGFPVQG---LQHFSELLMSELRPDE---YTLSVAL-------SSCARISSLRHGKQIHG 511
               + G   L  ++   + E+ P++   YTL  ++          ARI  L   +  HG
Sbjct: 473 GACKIHGDVKLAKWAAEKLFEMEPNKPVNYTLMSSVFASEGHWHDVARIHKLMRDRCGHG 532



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 98/249 (39%), Gaps = 55/249 (22%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    R G   +A+ L + +     L+PD  +L++ + +C++   +    Q++AY L
Sbjct: 266 NTMVVGYGRLGDGGEAMKLLIGMFQE-DLRPDEITLASIIRSCSSALTSCEIMQVNAYVL 324

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  A+  +AN +++ Y     +    + F+ +  PD+ +WT+ + A        YA  
Sbjct: 325 KNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVTWTSLIGA--------YA-- 374

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
            F  +P                       I  F EM    V  D   F  VLS C  AGL
Sbjct: 375 -FHSLPKNS--------------------IDTFEEMLADGVWPDQIVFLEVLSACSHAGL 413

Query: 204 LEFG-------RQLHSLVTKSGFSCLVSVVN--ALITMYFNC-------------GNVVD 241
           +  G       +  H L     ++CL+ ++    L+   FN              G  + 
Sbjct: 414 VNEGLHYFSLMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIG 473

Query: 242 ACKVFEEAK 250
           ACK+  + K
Sbjct: 474 ACKIHGDVK 482


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 203/625 (32%), Positives = 324/625 (51%), Gaps = 40/625 (6%)

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           + ++PD+ +W   +S+  + GH D A  VF+ MP R    YNAMI+G   N    +   L
Sbjct: 40  KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDL 99

Query: 177 FREMHKLDVRRDNYSFASVLS--VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           F +M +    RD +S+  +L+  V +  L E   +L  L+ K      V   NA+++ Y 
Sbjct: 100 FDKMPE----RDLFSWNVMLTGYVRNRRLGE-AHKLFDLMPKKD----VVSWNAMLSGYA 150

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G V +A +VF +      + IS+N ++      GR++EA   F          S+  +
Sbjct: 151 QNGFVDEAREVFNKMPHR--NSISWNGLLAAYVHNGRLKEARRLFE---------SQSNW 199

Query: 295 VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-------NAAITMYSSCGKIDEACMIFA 347
             +   CL   +G  V    +    + +  +        N  I+ Y+  G + +A  +F 
Sbjct: 200 ELISWNCL---MGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN 256

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
               +D+ +W  M+S Y Q  +   A   + EM       +E ++ ++LA  G+++  +M
Sbjct: 257 ESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISYNAMLA--GYVQYKKM 310

Query: 408 IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           + A      +   NI   N +I+ Y +N  I QA ++F  M  R+ ++W  +I+G+  NG
Sbjct: 311 VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNG 370

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L  F E+       +  T S ALS+CA I++L  GKQ+HG V+K    +   +GN
Sbjct: 371 HYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGN 430

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y KCG  D +  VF  + EKD +SWN +I+ YA+HG G++A+  F++M+  G +K
Sbjct: 431 ALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAG-VK 489

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD+ T   VLSACSH+GL+D GT  F SM  DY   P   H +CM+DLLGRAG L+EAE 
Sbjct: 490 PDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAEN 549

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           ++ +      + +W AL  A   HGN  LG   A ++ + E     +YVLLSN+YAA+G 
Sbjct: 550 LMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGR 609

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W +   +R  ++  GV K  G SW+
Sbjct: 610 WVDVGKMRSKMREAGVQKVTGYSWV 634



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 198/410 (48%), Gaps = 21/410 (5%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N ++  Y     L   +++F  +   DV SW T +S   ++G +  A  +F++ P RD+ 
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVF 264

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            + AM++G  +NG  D     F EM      ++  S+ ++L    AG +++ + + +   
Sbjct: 265 TWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISYNAML----AGYVQYKKMVIAGEL 316

Query: 216 KSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
                C  +S  N +IT Y   G +  A K+F+      C  +S+  ++ G A  G  EE
Sbjct: 317 FEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDC--VSWAAIISGYAQNGHYEE 374

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           AL  F +M       +  TF   +S C       +G QVH Q +K+GFE    V NA + 
Sbjct: 375 ALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLG 434

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  CG  DEA  +F  ++EKD+VSWNTMI+ YA+   GR A++ +  M+  G++PDE T
Sbjct: 435 MYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEIT 494

Query: 392 FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA----LISAYAKNERIKQAYQIFHNM 447
              +L++     +++    + +      N++ ++     +I    +  R+++A  +  NM
Sbjct: 495 MVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNM 554

Query: 448 S-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
                  +W  L+    ++G    G +  +E++  ++ P    + V LS+
Sbjct: 555 PFDPGAASWGALLGASRIHGNTELG-EKAAEMVF-KMEPQNSGMYVLLSN 602



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 158/635 (24%), Positives = 280/635 (44%), Gaps = 100/635 (15%)

Query: 3   QRRITATIAGNSNTSKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLS 61
           +RR T + + +S   K+  ++  N ++++  R+GH   AL +F  +       P   S+S
Sbjct: 27  KRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSM-------PRRSSVS 79

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
                   LRNA F                        SL   ARDL      F ++   
Sbjct: 80  YNAMISGYLRNAKF------------------------SL---ARDL------FDKMPER 106

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++SW   L+   +   +  A ++FD MP +D+  +NAM++G  +NG+ D    +F +M 
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM- 165

Query: 182 KLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS---GFSCL--------------- 222
                R++ S+  +L+     G L+  R+L    +      ++CL               
Sbjct: 166 ---PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQ 222

Query: 223 ---------VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
                    V   N +I+ Y   G++  A ++F E+   + D  ++  M+ G    G V+
Sbjct: 223 LFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESP--IRDVFTWTAMVSGYVQNGMVD 280

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSG--FEAYT----SVSN 327
           EA   F +M V     +E+++ ++++       GY  + + + +G  FEA      S  N
Sbjct: 281 EARKYFDEMPVK----NEISYNAMLA-------GYVQYKKMVIAGELFEAMPCRNISSWN 329

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             IT Y   G I +A  +F  + ++D VSW  +IS YAQ      A+  ++EM+  G   
Sbjct: 330 TMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESS 389

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  TF   L++   I  +E+   +H  V   G  T   V NAL+  Y K     +A  +F
Sbjct: 390 NRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVF 449

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             +  +++++WNT+I G+  +GF  Q L  F  +  + ++PDE T+   LS+C+    + 
Sbjct: 450 EGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLID 509

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISA 562
            G +    + ++ N+         MI L  + G L+ +  +  NM  +    SW AL+ A
Sbjct: 510 RGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGA 569

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              HG  +      KA + V +++P  +    +LS
Sbjct: 570 SRIHGNTELGE---KAAEMVFKMEPQNSGMYVLLS 601


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/555 (31%), Positives = 297/555 (53%), Gaps = 7/555 (1%)

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           H   V    ++F  VL  C     LE   +LHS +  +GF   V V  AL+ +Y  C   
Sbjct: 20  HTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCF 79

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A  VF++    +   +S+N ++        ++++    + M +  L  S  TF   ++
Sbjct: 80  HSARLVFDQMP--IKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLA 137

Query: 300 ACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
           +C  P+ G  +H    K G + +  ++N+ ++MY    +ID A  +F  L +K IVSW  
Sbjct: 138 SCSLPQ-GLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTI 196

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFING 416
           ++  Y            + +M+   + PD   F +L++    SG + +  ++H+ +  +G
Sbjct: 197 ILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSG 256

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
                 + N L++ YAK + +  A ++F  +  +++  W ++I+G+   G+P + L  F+
Sbjct: 257 FDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFN 316

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            LL +  RP+E TL+  LS+CA + SLR G++I  Y+L N L S + +  ++I ++ KCG
Sbjct: 317 MLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCG 376

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            +  +  +F  +  KD   W+A+I+ YA HG GKEA++ F  MQ+   IKPD   +T+VL
Sbjct: 377 SIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVL 436

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            ACSH+GL++DG + F SM  D+G  P+  H SC++DLLGRAGY++ A R I    +  +
Sbjct: 437 LACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQ 496

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W    SAC  H NL LG   A  L + E      +VL++N+Y + G W+EAA  R +
Sbjct: 497 ARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSI 556

Query: 717 LKRTGVIKQPGCSWI 731
           +   G++K+PG S I
Sbjct: 557 INARGLVKEPGWSQI 571



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/519 (23%), Positives = 229/519 (44%), Gaps = 46/519 (8%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           ++    L ACA L +     +LH++ L  G +A+                      VF +
Sbjct: 29  FTFPFVLKACAKLPSLEDATKLHSHILLTGFQAH----------------------VFVQ 66

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
               DVYS         K      A  VFD+MP + L  +N++I+    + + D   G+ 
Sbjct: 67  TALVDVYS---------KCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGIL 117

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           ++M  L +   + +F   L+ C    L  G  +H  +TK G    + + N++++MY    
Sbjct: 118 KQMQLLGLELSSATFTGFLASCS---LPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLN 174

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            +  A  VF          +S+ +++ G  S G V +    F  M    + P  + FV++
Sbjct: 175 QIDGALSVFYTLHQKSI--VSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNL 232

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +S C       +   VH+  +KSGF+    + N  + MY+ C  +  A  +F  + EK +
Sbjct: 233 ISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSV 292

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAF 411
             W +MIS YAQ      A+  +  +     RP+E T  ++L   A  G + M E I  +
Sbjct: 293 FLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQY 352

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           + +NG+ ++++V  +LI  + K   IK+A  +F  +  +++  W+ +ING+ ++G   + 
Sbjct: 353 ILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEA 412

Query: 472 LQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMI 529
           L  F ++     ++PD    +  L +C+    +  G +    + K+  +   +   + ++
Sbjct: 413 LNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLV 472

Query: 530 TLYAKCGDLDCSLRVFN-MMIEKDTISWNALISA-YAQH 566
            L  + G ++ +LR    M +      W   +SA Y  H
Sbjct: 473 DLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHH 511



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 106/249 (42%), Gaps = 35/249 (14%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           PD       ++ C    N      +H+  L++G      + N ++++Y   +DLVS +RV
Sbjct: 224 PDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRV 283

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F  +    V+ WT+                               MI+G  + GY +  +
Sbjct: 284 FDAVHEKSVFLWTS-------------------------------MISGYAQFGYPNEAL 312

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            LF  + +   R +  + A+VLS C + G L  G ++   +  +G    + V  +LI M+
Sbjct: 313 HLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMF 372

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSEL 292
             CG++  A  +FE       D   ++ M++G A  G  +EAL  F  M     ++P  +
Sbjct: 373 CKCGSIKKAQALFERIPNK--DLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAI 430

Query: 293 TFVSVMSAC 301
            + SV+ AC
Sbjct: 431 VYTSVLLAC 439



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 6/160 (3%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  ++ G+  +ALHLF  +  +   +P+  +L+T L+ACA + +   G ++  Y L  G
Sbjct: 299 ISGYAQFGYPNEALHLFNMLLRTAS-RPNELTLATVLSACAEMGSLRMGEEIEQYILLNG 357

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L +   V  +++ ++     +   + +F  I N D+  W+  ++     G    A  +F 
Sbjct: 358 LGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFH 417

Query: 148 KMPDR-----DLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           KM +      D  VY +++  C+ +G  + G+  FR M K
Sbjct: 418 KMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQK 457


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 213/686 (31%), Positives = 327/686 (47%), Gaps = 57/686 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P   S    L  C   ++   G  +HA  LR G  +  ++ N++++LY     +V  K
Sbjct: 6   LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF  I N DV SW   ++  ++ G V Y+                              
Sbjct: 66  LVFESITNKDVVSWNCLINGYSQKGTVGYS-----------------------------F 96

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR-QLHSLVTKSGFSCLVSVVNALIT 231
            + LF+ M   +   + ++F+ V +   +    FG  Q H+L  K+     V V ++LI 
Sbjct: 97  VMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLIN 156

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G ++DA KVF+       + +S+  ++ G A      EA   F  M        +
Sbjct: 157 MYCKIGCMLDARKVFDTIPER--NTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDK 214

Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
             + SV+SA   P +   G Q+H  A+K+G  +  SV NA +TMY  CG +D+A   F  
Sbjct: 215 FIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFEL 274

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMV 405
             +KD ++W+ MI+ YAQ      A+  +  M   G +P EFTF G + A S  G +E  
Sbjct: 275 SGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEG 334

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + IH +    G    I          AK   +  A + F  +   +I+ W +        
Sbjct: 335 KQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTS-------- 386

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
                       + M  + P E T++  L +C+ +++L  GKQIH   +K     ++ +G
Sbjct: 387 ----------CRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIG 436

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +A+ T+YAKCG L+    VF  M  +D ++WNA+IS  +Q+GEG +A+  F+ ++  G  
Sbjct: 437 SALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRH-GTT 495

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KPD  TF  VLSACSH GLV+ G   F  M++++G IP  +H +CM+D+L RAG L E +
Sbjct: 496 KPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETK 555

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             I S  I      W  L  AC  + N  LG      L+E    + S Y+LLS+IY A G
Sbjct: 556 EFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALG 615

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
             ++   +R L+K  GV K+PGCSWI
Sbjct: 616 RSDDVERVRRLMKLRGVNKEPGCSWI 641



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 32/158 (20%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           ++ P   ++++ L AC++L     G Q+HA  ++ G      + + + ++Y     L   
Sbjct: 393 RIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDG 452

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             VF  + + D+ +W                               NAMI+G ++NG   
Sbjct: 453 NLVFRRMPSRDIMTW-------------------------------NAMISGLSQNGEGL 481

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
             + LF E+     + D  +F +VLS C   GL+E G+
Sbjct: 482 KALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGK 519


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 298/553 (53%), Gaps = 11/553 (1%)

Query: 187 RDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           RD  + A V+ +      L  G+QLH+L+  +G++    + N L+ MY  CG +  A K+
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F+       + +S+  M+ GL+   +  EA+  F  M +    P++  F S + AC    
Sbjct: 63  FDTMPQR--NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+H  A+K G  +   V +    MYS CG + +AC +F  +  KD VSW  MI 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT 419
            Y++      A+LA+ +M    +  D+    S L + G ++  +    +H+ V   G  +
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 420 NIQVSNALISAYAKNERIKQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           +I V NAL   Y+K   ++ A  +F  +   RN++++  LI+G++      +GL  F EL
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
               + P+E+T S  + +CA  ++L  G Q+H  V+K N      + + ++ +Y KCG L
Sbjct: 301 RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLL 360

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + +++ F+ + +   I+WN+L+S + QHG GK+A+  F+ M D G +KP+  TF ++L+ 
Sbjct: 361 EQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRG-VKPNAITFISLLTG 419

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSHAGLV++G   F SM   YG +P E+H SC++DLLGRAG L EA+  IN    +  + 
Sbjct: 420 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 479

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W +   AC  HG+  +G++ A  L++ E       VLLSNIYA    WE+  ++R  ++
Sbjct: 480 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 539

Query: 719 RTGVIKQPGCSWI 731
              V K PG SW+
Sbjct: 540 DGNVKKLPGYSWV 552



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 236/524 (45%), Gaps = 45/524 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L+  +   A  +    G QLHA  + AG      + N ++++Y             
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMY------------- 50

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                             +K G +D+A ++FD MP R+L  + AMI+G ++N      I 
Sbjct: 51  ------------------SKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIR 92

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            F  M         ++F+S +  C + G +E G+Q+H L  K G    + V + L  MY 
Sbjct: 93  TFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYS 152

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG + DACKVFEE      D +S+  M+DG + +G  EEAL+ F+ M+   +   +   
Sbjct: 153 KCGAMFDACKVFEEMP--CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210

Query: 295 VSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            S + AC     C + G  VH+  +K GFE+   V NA   MYS  G ++ A  +F    
Sbjct: 211 CSTLGACGALKAC-KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 269

Query: 351 E-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
           E +++VS+  +I  Y +       +  ++E++  GI P+EFTF SL+   A+   +E   
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +HA V       +  VS+ L+  Y K   ++QA Q F  +     I WN+L++ F  +G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHG 389

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLG 525
                ++ F  ++   ++P+  T    L+ C+    +  G      + K   ++      
Sbjct: 390 LGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 449

Query: 526 NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGE 568
           + +I L  + G L  +    N M  E +   W + + A   HG+
Sbjct: 450 SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGD 493



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 48/451 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++  + +A+  F  +    ++ P  ++ S+ + ACA+L +   G Q+H  AL+ G
Sbjct: 78  ISGLSQNSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           + +   V + +  +Y     +    +VF E+   D  SWT  +   +K+G  + A   F 
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           KM D ++ +                               D +   S L  C A    +F
Sbjct: 197 KMIDEEVTI-------------------------------DQHVLCSTLGACGALKACKF 225

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEAKGYVCDHISYNVMM 263
           GR +HS V K GF   + V NAL  MY   G++  A  VF    E +  V    SY  ++
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVV----SYTCLI 281

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
           DG     ++E+ L  F ++    + P+E TF S++ AC        G Q+HAQ MK  F+
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               VS+  + MY  CG +++A   F  + +   ++WN+++S + Q  LG+ AI  +  M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERM 401

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNER 436
              G++P+  TF SLL     +G +E  ++  ++     G++   +  + +I    +  R
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
           +K+A +  + M    N   W + +    ++G
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492


>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 764

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/622 (30%), Positives = 335/622 (53%), Gaps = 20/622 (3%)

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHK 182
           Y     +S   + G ++ A ++FDKMP+R++  YNA+ +  + N  Y      L  +M  
Sbjct: 46  YKNNNLISMYVRCGSLEQARKLFDKMPERNVVSYNALYSAYSRNLDYASYAFSLINQMAS 105

Query: 183 LDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             ++ ++ +F S++ VC   +LE    G  LHS + K G+S  V V  +++ MY +CG++
Sbjct: 106 ESLKPNSSTFTSLVQVCT--VLEDVLMGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDL 163

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A ++FE   G   D +++N M+ G+    ++E+ L+ FR ML++ + P++ T+  V++
Sbjct: 164 ESARRIFECVNG--GDAVAWNTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLN 221

Query: 300 AC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           AC         VG  +HA+ + S   A   V NA + MY SCG + EA  +F ++   ++
Sbjct: 222 ACSKLGSYRYSVGKLIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNL 281

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMV---EMIHA 410
           VSWN++IS  ++   G  AIL Y  +  +   RPDE+TF + + ++   E     +++H 
Sbjct: 282 VSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHG 341

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            V   G   ++ V   L+S Y KN   + A ++F  ++ R+++ W  +I G    G    
Sbjct: 342 QVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSEC 401

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            +Q F E+   + R D ++LS  L +C+ ++ LR G+  H   +K    + MS+  A++ 
Sbjct: 402 AVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVD 461

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y K G  + +  +F+++   D   WN+++ AY+QHG  ++A S F+ + + G   PD  
Sbjct: 462 MYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENG-FTPDAV 520

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA-ERVIN 649
           T+ ++L+ACSH G   +G  +++ M  + G      H SCM+ L+ +AG L EA E +  
Sbjct: 521 TYLSLLAACSHKGSTQEGKFLWNQM-KEQGITAGFKHYSCMVSLVSKAGLLGEALELIKQ 579

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
           S     +++ W  L SAC    NL++G   A  +L+ + +  + ++LLSN+YA  G W++
Sbjct: 580 SPPENNQAELWRTLLSACVNARNLQIGLYAADQILKLDPEDTATHILLSNLYAVNGRWKD 639

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
            A +R  ++     K PG SWI
Sbjct: 640 VAEMRRKIRGLASAKDPGLSWI 661



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 131/543 (24%), Positives = 245/543 (45%), Gaps = 45/543 (8%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SR+  Y       +   +S  LKP+  + ++ +  C  L +   G+ LH+  ++ G    
Sbjct: 87  SRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHSQIIKLGYSDN 146

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V  ++L +Y +  DL S +R+F  +   D  +W                         
Sbjct: 147 VVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAW------------------------- 181

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF--GR 208
                 N MI G   N   + G+ LFR M    V    ++++ VL+ C   G   +  G+
Sbjct: 182 ------NTMIVGIFRNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGK 235

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H+ +  S     + V NAL+ MY +CG++ +A  VF   K +  + +S+N ++ G + 
Sbjct: 236 LIHARMIVSDILADLPVENALLDMYCSCGDMKEAFYVF--GKIHNPNLVSWNSIISGCSE 293

Query: 269 VGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTS 324
            G  E+A++ +R +L +++ RP E TF + + A   P     G  +H Q  K G+E    
Sbjct: 294 NGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVF 353

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V    ++MY   G+ + A  +F  + E+D+V W  MI   ++      A+  ++EM    
Sbjct: 354 VGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREK 413

Query: 385 IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
            R D F+  S+L +   + M+   ++ H+     G    + VS AL+  Y KN + + A 
Sbjct: 414 NRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAE 473

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            IF  +S  ++  WN+++  +  +G   +    F ++L +   PD  T    L++C+   
Sbjct: 474 SIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKG 533

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS--WNAL 559
           S + GK +   + +  + +     + M++L +K G L  +L +      ++  +  W  L
Sbjct: 534 STQEGKFLWNQMKEQGITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTL 593

Query: 560 ISA 562
           +SA
Sbjct: 594 LSA 596



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 220/487 (45%), Gaps = 54/487 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF--GNQLHAY 82
           N  +  + R+   +D L LF  +  S  + P  ++ S  L AC+ L +  +  G  +HA 
Sbjct: 182 NTMIVGIFRNDKIEDGLMLFRSMLMS-GVDPTQFTYSMVLNACSKLGSYRYSVGKLIHAR 240

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            + + + A   V N +L +Y +  D+     VF +I NP++ SW + +S           
Sbjct: 241 MIVSDILADLPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIIS----------- 289

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSF-ASVLSVCD 200
                               GC+ENG+ +  I ++R + ++   R D Y+F A++ +  +
Sbjct: 290 --------------------GCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAE 329

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC--DHIS 258
                 G+ LH  VTK G+   V V   L++MYF  G    A KVF    G +   D + 
Sbjct: 330 PEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVF----GVITERDVVL 385

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +  M+ G + VG  E A+  F +M     R    +  SV+ AC      R G   H+ A+
Sbjct: 386 WTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAI 445

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K+GF+   SVS A + MY   GK + A  IF+ +   D+  WN+M+  Y+Q  +   A  
Sbjct: 446 KTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQS 505

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + ++   G  PD  T+ SLLA+    G  +  + +   +   GI    +  + ++S  +
Sbjct: 506 FFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAGFKHYSCMVSLVS 565

Query: 433 KNERIKQAYQIFHNMSPRN--IITWNTLINGFLLNGFPVQ-GLQHFSELLMSELRPDEYT 489
           K   + +A ++     P N     W TL++   +N   +Q GL    ++L  +L P++  
Sbjct: 566 KAGLLGEALELIKQSPPENNQAELWRTLLSA-CVNARNLQIGLYAADQIL--KLDPEDTA 622

Query: 490 LSVALSS 496
             + LS+
Sbjct: 623 THILLSN 629



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 48/360 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G  + A+ ++ ++      +PD Y+ S  + A A       G  LH
Sbjct: 281 LVSWNSIISGCSENGFGEQAILMYRRLLRISTPRPDEYTFSAAIPATAEPEKFIHGKLLH 340

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
               + G +    V  T+LS+Y    +  S ++VF  I   DV  WT             
Sbjct: 341 GQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWT------------- 387

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                              MI G +  G  +  + LF EM++   R D +S +SVL  C 
Sbjct: 388 ------------------EMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACS 429

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D  +L  G+  HSL  K+GF  ++SV  AL+ MY   G    A  +F        D   +
Sbjct: 430 DMAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSN--PDLKCW 487

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGY----QVHA 312
           N M+   +  G VE+A   F  +L     P  +T++S+++AC      + G     Q+  
Sbjct: 488 NSMLGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKE 547

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS--WNTMISTYAQ-RNL 369
           Q + +GF+ Y+ +    +++ S  G + EA  +  +   ++  +  W T++S     RNL
Sbjct: 548 QGITAGFKHYSCM----VSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNL 603


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 170/479 (35%), Positives = 268/479 (55%), Gaps = 7/479 (1%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +N M+ GL S    ++A+  +  M      P+  TF  V+ AC   L  ++G ++H   +
Sbjct: 80  WNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K GF+    V  + + +Y+ CG +++A  +F  + +K++VSW  +IS Y      R AI 
Sbjct: 140 KGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAID 199

Query: 376 AYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            +  +  + + PD FT   +L++    G +   E IH  +   G++ N+ V  +L+  YA
Sbjct: 200 MFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYA 259

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   +++A  +F  M  ++I++W  +I G+ LNG P + +  F ++    ++PD YT+  
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            LS+CAR+ +L  G+ + G V +N  +    LG A+I LYAKCG +  +  VF  M EKD
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKD 379

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            + WNA+IS  A +G  K +   F  ++ +G IKPD  TF  +L  C+HAGLVD+G R F
Sbjct: 380 RVVWNAIISGLAMNGYVKISFGLFGQVEKLG-IKPDGNTFIGLLCGCTHAGLVDEGRRYF 438

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +SM   +   P+ +H  CM+DLLGRAG LDEA ++I +  ++A +  W AL  AC  H +
Sbjct: 439 NSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRD 498

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +L  +    L+E E      YVLLSNIY+A   W+EAA +R  +    + K PGCSWI
Sbjct: 499 TQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWI 557



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 223/467 (47%), Gaps = 11/467 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D Y     L         +Y   +F ++   ++ ++N MI G   N   D  I  +  M 
Sbjct: 45  DNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 +N++F  VL  C   L L+ G ++H+LV K GF C V V  +L+ +Y  CG + 
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA KVF++      + +S+  ++ G   VG+  EA+  FR +L  +L P   T V V+SA
Sbjct: 165 DAHKVFDDIPDK--NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222

Query: 301 CLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C        G  +H   M+ G      V  + + MY+ CG +++A  +F  + EKDIVSW
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSW 282

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFI 414
             MI  YA   L + AI  +L+MQ   ++PD +T   +L++    G +E+ E +   V  
Sbjct: 283 GAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDR 342

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
           N  + N  +  ALI  YAK   + +A+++F  M  ++ + WN +I+G  +NG+       
Sbjct: 343 NEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGL 402

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYA 533
           F ++    ++PD  T    L  C     +  G++    + +  +L   +     M+ L  
Sbjct: 403 FGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLG 462

Query: 534 KCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           + G LD + ++  NM +E + I W AL+ A   H + + A    K +
Sbjct: 463 RAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQL 509



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 142/286 (49%), Gaps = 6/286 (2%)

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +FH +   NI  WNT+I G + N      ++ +  +      P+ +T    L +CAR+  
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L+ G +IH  V+K      + +  +++ LYAKCG L+ + +VF+ + +K+ +SW A+IS 
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y   G+ +EA+  F+ + ++  + PD  T   VLSAC+  G ++ G  I   ++ + G +
Sbjct: 188 YIGVGKFREAIDMFRRLLEM-NLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM-EMGMV 245

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
                 + ++D+  + G +++A  V +    +    +W A+    A +G L    I   L
Sbjct: 246 RNVFVGTSLVDMYAKCGNMEKARSVFDGMP-EKDIVSWGAMIQGYALNG-LPKEAIDLFL 303

Query: 683 LLEREQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRTGVIKQP 726
            ++RE  KP  Y ++  + A A  G  E    +  L+ R   +  P
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNP 349



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 163/416 (39%), Gaps = 83/416 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L  +  + DA+  F  +  S    P+ ++    L ACA L +   G ++H   +
Sbjct: 81  NTMIRGLVSNDCFDDAIE-FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVV 139

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN------------------------ 120
           + G      V  +++ LY     L    +VF +I +                        
Sbjct: 140 KGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAID 199

Query: 121 -----------PDVYSWTTFLSACT----------------------------------- 134
                      PD ++    LSACT                                   
Sbjct: 200 MFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYA 259

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G+++ A  VFD MP++D+  + AMI G   NG     I LF +M + +V+ D Y+   
Sbjct: 260 KCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVG 319

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C   G LE G  +  LV ++ F     +  ALI +Y  CG++  A +VF+  K   
Sbjct: 320 VLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEK- 378

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----Q 309
            D + +N ++ GLA  G V+ +   F  +    ++P   TF+ ++  C C   G     +
Sbjct: 379 -DRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL--CGCTHAGLVDEGR 435

Query: 310 VHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARL-QEKDIVSWNTMIS 362
            +  +M   F    S+ +    + +    G +DEA  +   +  E + + W  ++ 
Sbjct: 436 RYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLG 491


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 201/618 (32%), Positives = 309/618 (50%), Gaps = 68/618 (11%)

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +   R D+++   VL  C +      G   H L+  +GF   V + NAL+ MY  CG+
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 239 VVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSE----- 291
           + +A  +F+E  +  + D IS+N ++           AL  F  M L+   +P+      
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 292 LTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           ++ V+++ AC      P+   +VH  A+++G      V NA I  Y+ CG ++ A  +F 
Sbjct: 121 ISIVNILPACGSLKAVPQTK-EVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFN 179

Query: 348 RLQEKDIVSWNTM-----------------------------------ISTYAQRNLGRS 372
            ++ KD+VSWN M                                   I+ Y+QR     
Sbjct: 180 MMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHE 239

Query: 373 AILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT---------- 419
           A+  + +M   G  P+  T  S+L   AS G       IHA+   N ++T          
Sbjct: 240 ALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDE 299

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHN--MSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           ++ V NALI  Y+K    K A  IF +  +  RN++TW  +I G    G     L+ F E
Sbjct: 300 DLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVE 359

Query: 478 LLMSE--LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMITLYA 533
           ++     + P+ YT+S  L +CA ++++R GKQIH YVL+++    S   + N +I +Y+
Sbjct: 360 MISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYS 419

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCGD+D +  VF+ M +K  ISW ++++ Y  HG G EA+  F  M+  G + PD  TF 
Sbjct: 420 KCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFV-PDDITFL 478

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            VL ACSH G+VD G   FDSM  DYG  P  +H +  +DLL R G LD+A + +    +
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W AL SAC  H N+ L       L+E   +    Y L+SNIYA AG W++ A I
Sbjct: 539 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598

Query: 714 RELLKRTGVIKQPGCSWI 731
           R L+K++G+ K+PGCSW+
Sbjct: 599 RHLMKKSGIKKRPGCSWV 616



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 147/617 (23%), Positives = 258/617 (41%), Gaps = 88/617 (14%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D ++L   L AC  L +   G+  H      G ++   + N ++++Y     L     +F
Sbjct: 9   DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68

Query: 116 SEIQN---PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            EI      DV SW + +SA  K  +   A ++F KM                       
Sbjct: 69  DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT---------------------- 106

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
              L       + R D  S  ++L  C +   +   +++H    ++G    V V NALI 
Sbjct: 107 ---LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALID 163

Query: 232 MYFNCGNVVDACKVFE--EAKGYVC-------------------------------DHIS 258
            Y  CG + +A KVF   E K  V                                D ++
Sbjct: 164 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVT 223

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +  ++ G +  G   EAL  FR M+ +   P+ +T +SV+SAC        G ++HA ++
Sbjct: 224 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 283

Query: 316 KS----------GFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMIST 363
           K+          G +    V NA I MYS C     A  IF    L+E+++V+W  MI  
Sbjct: 284 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 343

Query: 364 YAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGII 418
           +AQ      A+  ++EM  +  G+ P+ +T   +L +   +  + +   IHA+V  +   
Sbjct: 344 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY 403

Query: 419 TNIQ--VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
            +    V+N LI+ Y+K   +  A  +F +MS ++ I+W +++ G+ ++G   + L  F 
Sbjct: 404 DSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 463

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKC 535
           ++  +   PD+ T  V L +C+    +  G      +  +  L  +       I L A+ 
Sbjct: 464 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARF 523

Query: 536 GDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           G LD + + V +M +E   + W AL+SA   H   + A      + ++     +  ++T 
Sbjct: 524 GRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMN--AENDGSYTL 581

Query: 595 VLSACSHAGLVDDGTRI 611
           + +  + AG   D  RI
Sbjct: 582 ISNIYATAGRWKDVARI 598



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 197/436 (45%), Gaps = 49/436 (11%)

Query: 3   QRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKP-----DI 57
           QR I   I+ NS  S  +            +S +   AL LF ++      KP     DI
Sbjct: 73  QRGIDDVISWNSIVSAHV------------KSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
            S+   L AC +L+      ++H  A+R G      V N ++  Y     + +  +VF+ 
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYEDIG 173
           ++  DV SW   ++  ++ G+   A E+F  M   ++P+    + A+I G ++ G     
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS-------- 224
           + +FR+M       +  +  SVLS C + G    G ++H+   K+   CL++        
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKN---CLLTLDNDFGGE 297

Query: 225 -----VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
                V NALI MY  C +   A  +F++      + +++ VM+ G A  G   +AL  F
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357

Query: 280 RDMLVA--SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS----VSNAAI 330
            +M+     + P+  T   ++ AC      R+G Q+HA  ++     Y S    V+N  I
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRH--HQYDSSAYFVANCLI 415

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MYS CG +D A  +F  + +K  +SW +M++ Y     G  A+  + +M+  G  PD+ 
Sbjct: 416 NMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDI 475

Query: 391 TFGSLLASSGFIEMVE 406
           TF  +L +     MV+
Sbjct: 476 TFLVVLYACSHCGMVD 491


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 205/615 (33%), Positives = 312/615 (50%), Gaps = 26/615 (4%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D+  W   ++   + G  D A  +F+ MP R    +NAMI+GC  N    +   LF +
Sbjct: 46  DADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEK 105

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M      RD  S+  ++S C     L   R L   + +      V   NA+++ Y   G 
Sbjct: 106 MPT----RDLVSWNVMISGCVRYRNLRAARLLFDQMPERD----VVSWNAMLSGYAQNGY 157

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           V +A ++F+E      + IS+N M+      GR+E+A       L  S    EL   + M
Sbjct: 158 VKEAKEIFDEMP--CKNSISWNGMLAAYVQNGRIEDA-----RRLFESKADWELISWNCM 210

Query: 299 SACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
                 R    V A+ +         VS N  I+ Y+  G++ EA  +F     +D+ +W
Sbjct: 211 MGGYVKR-NRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTW 269

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
             M+S Y Q  +   A   +  M       +  ++ +++A  G+++   M  A      +
Sbjct: 270 TAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAIIA--GYVQCKRMDQARELFEAM 323

Query: 418 -ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              N+   N +I+ YA+N  I QA   F  M  R+ I+W  +I G+  +G+  + L  F 
Sbjct: 324 PCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFV 383

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           E+     R +  T +  LS+CA I++L  GKQ+HG V+K  L S   +GNA++ +Y KCG
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           ++D +  VF  + EK+ +SWN +I+ YA+HG GKEA+  F++M+  G I PD  T   VL
Sbjct: 444 NIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTG-ILPDDVTMVGVL 502

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SACSH GLVD GT  F SM  DYG      H +CM+DLLGRAG LD+A+ ++ +   +  
Sbjct: 503 SACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPD 562

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           +  W AL  A   HGN  LG   A ++ E E D   +YVLLSN+YAA+G W +   +R  
Sbjct: 563 AATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLR 622

Query: 717 LKRTGVIKQPGCSWI 731
           ++  GV K PG SW+
Sbjct: 623 MRDRGVKKVPGYSWV 637



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 228/485 (47%), Gaps = 30/485 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  L+  +++G+ ++A  +F ++       P   S+S      A ++N    +   
Sbjct: 142 VVSWNAMLSGYAQNGYVKEAKEIFDEM-------PCKNSISWNGMLAAYVQNGRIEDARR 194

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            +  +A  +      N ++  Y     LV  + +F  +   D  SW T +S   + G + 
Sbjct: 195 LFESKADWELISW--NCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELL 252

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F++ P RD+  + AM++G  +NG  D    +F  M +    +++ S+ +++    
Sbjct: 253 EAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPE----KNSVSWNAII---- 304

Query: 201 AGLLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           AG ++  R   +        C  VS  N +IT Y   G++  A   F+       D IS+
Sbjct: 305 AGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQR--DSISW 362

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             ++ G A  G  EEAL  F +M     R +  TF S +S C       +G QVH + +K
Sbjct: 363 AAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK 422

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G E+   V NA + MY  CG ID+A ++F  ++EK++VSWNTMI+ YA+   G+ A++ 
Sbjct: 423 AGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALML 482

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYA 432
           +  M+  GI PD+ T   +L++   +G ++   E  ++     GI  N +    +I    
Sbjct: 483 FESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLG 542

Query: 433 KNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           +  R+  A  +  NM    +  TW  L+    ++G    G +  +  ++ E+ PD   + 
Sbjct: 543 RAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEK--AAKMIFEMEPDNSGMY 600

Query: 492 VALSS 496
           V LS+
Sbjct: 601 VLLSN 605


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/553 (32%), Positives = 298/553 (53%), Gaps = 11/553 (1%)

Query: 187 RDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           RD  + A V+ +      L  G+QLH+L+  +G++    + N L+ MY  CG +  A K+
Sbjct: 3   RDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKL 62

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F+       + +S+  M+ GL+   +  EA+  F  M +    P++  F S + AC    
Sbjct: 63  FDTMPQR--NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120

Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+H  A+K G  +   V +    MYS CG + +AC +F  +  KD VSW  MI 
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT 419
            Y++      A+LA+ +M    +  D+    S L + G ++  +    +H+ V   G  +
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 420 NIQVSNALISAYAKNERIKQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
           +I V NAL   Y+K   ++ A  +F  +   RN++++  LI+G++      +GL  F EL
Sbjct: 241 DIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVEL 300

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
               + P+E+T S  + +CA  ++L  G Q+H  V+K N      + + ++ +Y KCG L
Sbjct: 301 RRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLL 360

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + +++ F+ + +   I+WN+L+S + QHG GK+A+  F+ M D G +KP+  TF ++L+ 
Sbjct: 361 EHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRG-VKPNAITFISLLTG 419

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSHAGLV++G   F SM   YG +P E+H SC++DLLGRAG L EA+  IN    +  + 
Sbjct: 420 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 479

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W +   AC  HG+  +G++ A  L++ E       VLLSNIYA    WE+  ++R  ++
Sbjct: 480 GWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMR 539

Query: 719 RTGVIKQPGCSWI 731
              V K PG SW+
Sbjct: 540 DGNVKKLPGYSWV 552



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 235/524 (44%), Gaps = 45/524 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L+  +   A  +    G QLHA  + AG      + N ++++Y             
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMY------------- 50

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                             +K G +D+A ++FD MP R+L  + AMI+G ++N      I 
Sbjct: 51  ------------------SKCGELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIR 92

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            F  M         ++F+S +  C + G +E G+Q+H L  K G    + V + L  MY 
Sbjct: 93  TFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYS 152

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG + DACKVFEE      D +S+  M+DG + +G  EEAL+ F+ M+   +   +   
Sbjct: 153 KCGAMFDACKVFEEMP--CKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVL 210

Query: 295 VSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            S + AC     C + G  VH+  +K GFE+   V NA   MYS  G ++ A  +F    
Sbjct: 211 CSTLGACGALKAC-KFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDS 269

Query: 351 E-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
           E +++VS+  +I  Y +       +  ++E++  GI P+EFTF SL+   A+   +E   
Sbjct: 270 ECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGT 329

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +HA V       +  VS+ L+  Y K   ++ A Q F  +     I WN+L++ F  +G
Sbjct: 330 QLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHG 389

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLG 525
                ++ F  ++   ++P+  T    L+ C+    +  G      + K   ++      
Sbjct: 390 LGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHY 449

Query: 526 NAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGE 568
           + +I L  + G L  +    N M  E +   W + + A   HG+
Sbjct: 450 SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGD 493



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 48/451 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ LS++  + +A+  F  +    ++ P  ++ S+ + ACA+L +   G Q+H  AL+ G
Sbjct: 78  ISGLSQNSKFSEAIRTFCGMRICGEV-PTQFAFSSAIRACASLGSIEMGKQMHCLALKFG 136

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           + +   V + +  +Y     +    +VF E+   D  SWT  +   +K+G  + A   F 
Sbjct: 137 IGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFK 196

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
           KM D ++ +                               D +   S L  C A    +F
Sbjct: 197 KMIDEEVTI-------------------------------DQHVLCSTLGACGALKACKF 225

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEAKGYVCDHISYNVMM 263
           GR +HS V K GF   + V NAL  MY   G++  A  VF    E +  V    SY  ++
Sbjct: 226 GRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVV----SYTCLI 281

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
           DG     ++E+ L  F ++    + P+E TF S++ AC        G Q+HAQ MK  F+
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFD 341

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               VS+  + MY  CG ++ A   F  + +   ++WN+++S + Q  LG+ AI  +  M
Sbjct: 342 EDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERM 401

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNER 436
              G++P+  TF SLL   + +G +E  ++  ++     G++   +  + +I    +  R
Sbjct: 402 VDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGR 461

Query: 437 IKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
           +K+A +  + M    N   W + +    ++G
Sbjct: 462 LKEAKEFINRMPFEPNAFGWCSFLGACRIHG 492


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 199/628 (31%), Positives = 336/628 (53%), Gaps = 16/628 (2%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+     + D    T+ L    + G++  A +VFD MP RDL  ++ +++ C ENG    
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK 185

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + +F+ M    V  D  +  SV+  C + G L   R +H  +T+  F    ++ N+L+T
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245

Query: 232 MYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           MY  CG+++ + ++FE+ AK    + +S+  M+         E+AL  F +M+ + + P+
Sbjct: 246 MYSKCGDLLSSERIFEKIAKK---NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEA-YTSVSNAAITMYSSCGKIDEACMIF 346
            +T  SV+S+C      R G  VH  A++   +  Y S+S A + +Y+ CGK+ +   + 
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
             + +++IV+WN++IS YA R +   A+  + +M +  I+PD FT  S +++   +G + 
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           + + IH  V I   +++  V N+LI  Y+K+  +  A  +F+ +  R+++TWN+++ GF 
Sbjct: 423 LGKQIHGHV-IRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NG  V+ +  F  +  S L  +E T    + +C+ I SL  GK +H  ++ + L   + 
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLF 540

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
              A+I +YAKCGDL+ +  VF  M  +  +SW+++I+AY  HG    A+S F  M + G
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             KP++  F  VLSAC H+G V++G   F+ M   +G  P  +H +C +DLL R+G L E
Sbjct: 601 -TKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKE 658

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A R I      A +  W +L + C  H  + + + I   L +   D    Y LLSNIYA 
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 718

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
            G WEE   +R  +K + + K PG S I
Sbjct: 719 EGEWEEFRRLRSAMKSSNLKKVPGYSAI 746



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/611 (27%), Positives = 300/611 (49%), Gaps = 27/611 (4%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  + +   MG  D +  VF+  P  D  +Y  +I         D  I L+  +     +
Sbjct: 38  TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97

Query: 187 RDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
              + F SVL  C      L  G ++H  + K G      +  +L+ MY   GN+ DA K
Sbjct: 98  ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-- 302
           VF+     V D ++++ ++      G V +AL  F+ M+   + P  +T +SV+  C   
Sbjct: 158 VFDGMP--VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL 215

Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
            C R+   VH Q  +  F+   ++ N+ +TMYS CG +  +  IF ++ +K+ VSW  MI
Sbjct: 216 GCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMI 275

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGII 418
           S+Y +      A+ ++ EM   GI P+  T  S+L+S G I ++   + +H F     + 
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335

Query: 419 TNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            N + +S AL+  YA+  ++     +   +S RNI+ WN+LI+ +   G  +Q L  F +
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           ++   ++PD +TL+ ++S+C     +  GKQIHG+V++ + +S   + N++I +Y+K G 
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGS 454

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           +D +  VFN +  +  ++WN+++  ++Q+G   EA+S F  M     ++ ++ TF AV+ 
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH-SYLEMNEVTFLAVIQ 513

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQ 654
           ACS  G ++ G  +   ++     I     L   + ++D+  + G L+ AE V  +   +
Sbjct: 514 ACSSIGSLEKGKWVHHKLI-----ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGLWEEAA 711
           +      ++ +A   HG  R+G  I+      E       V+  N+ +A   +G  EE  
Sbjct: 569 SIVSW-SSMINAYGMHG--RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625

Query: 712 NIRELLKRTGV 722
               L+K  GV
Sbjct: 626 YYFNLMKSFGV 636



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 144/579 (24%), Positives = 260/579 (44%), Gaps = 58/579 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
            +G    AL +F +      ++PD  ++ + +  CA L        +H    R       
Sbjct: 179 ENGEVVKALRMF-KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + N++L++Y    DL+S +R+F +I   +  SWT                         
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT------------------------- 272

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
                 AMI+      + +  +  F EM K  +  +  +  SVLS C   GL+  G+ +H
Sbjct: 273 ------AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326

Query: 212 SLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLAS 268
               +        S+  AL+ +Y  CG + D   V       V D   +++N ++   A 
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR----VVSDRNIVAWNSLISLYAH 382

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTS 324
            G V +AL  FR M+   ++P   T  S +SAC    L P +G Q+H   +++   +   
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP-LGKQIHGHVIRTDV-SDEF 440

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N+ I MYS  G +D A  +F +++ + +V+WN+M+  ++Q      AI  +  M    
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +  +E TF +++   +S G +E  + +H  + I+G + ++    ALI  YAK   +  A 
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAE 559

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  MS R+I++W+++IN + ++G     +  F++++ S  +P+E      LS+C    
Sbjct: 560 TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSG 619

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM-IEKDTISWNAL 559
           S+  GK     ++K+  +S  S   A  I L ++ GDL  + R    M    D   W +L
Sbjct: 620 SVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678

Query: 560 ISAYAQHGEGKEAVSCFKAMQ-DVGRIKPDQATFTAVLS 597
           ++    H    + +   KA++ D+  I  D   +  +LS
Sbjct: 679 VNGCRIH----QKMDIIKAIKNDLSDIVTDDTGYYTLLS 713



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 26/444 (5%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEK 352
           ++ +  +C   R+  Q+HA  + +G      +     I  Y+  G  D + ++F      
Sbjct: 4   YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVEM---I 408
           D   +  +I      +L  +AI  Y  + S   +  +F F S+L A +G  E + +   +
Sbjct: 64  DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +   G+  +  +  +L+  Y +   +  A ++F  M  R+++ W+TL++  L NG  
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
           V+ L+ F  ++   + PD  T+   +  CA +  LR  + +HG + +       +L N++
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +T+Y+KCGDL  S R+F  + +K+ +SW A+IS+Y +    ++A+  F  M   G I+P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPN 302

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAE-- 645
             T  +VLS+C   GL+ +G  +    V      P  + LS  +++L    G L + E  
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYESLSLALVELYAECGKLSDCETV 361

Query: 646 -RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER----EQDKPSVYVLLSNI 700
            RV++ ++I A    W +L S  A       G +I  L L R    ++ KP  + L S+I
Sbjct: 362 LRVVSDRNIVA----WNSLISLYAHR-----GMVIQALGLFRQMVTQRIKPDAFTLASSI 412

Query: 701 YAA--AGLWEEAANIRELLKRTGV 722
            A   AGL      I   + RT V
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDV 436



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 206/443 (46%), Gaps = 45/443 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +++ +R    + AL  F ++  S  ++P++ +L + L++C  +     G  +H +A+R  
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333

Query: 88  LKA-YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           L   Y  ++  ++ LY     L   + V   + + ++ +W + +S     G V  A    
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA---- 389

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
                                      +GLFR+M    ++ D ++ AS +S C+ AGL+ 
Sbjct: 390 ---------------------------LGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+Q+H  V ++  S    V N+LI MY   G+V  A  VF + K      +++N M+ G
Sbjct: 423 LGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSV--VTWNSMLCG 479

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
            +  G   EA+  F  M  + L  +E+TF++V+ AC        G  VH + + SG +  
Sbjct: 480 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL 539

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +   A I MY+ CG ++ A  +F  +  + IVSW++MI+ Y       SAI  + +M  
Sbjct: 540 FT-DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598

Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G +P+E  F ++L++   SG +E  +     +   G+  N +     I   +++  +K+
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658

Query: 440 AYQIFHNMS-PRNIITWNTLING 461
           AY+    M    +   W +L+NG
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNG 681


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  320 bits (819), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 161/444 (36%), Positives = 260/444 (58%), Gaps = 8/444 (1%)

Query: 294 FVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            VS++ AC  C  V  G  VH   +K+     T+  N  + MY+ CG +D A ++F  + 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
            + +V+W ++I+ YA+  L   AI  + EM   G+ PD FT  ++L   A +G +E  + 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H ++  N + +NI V NAL+  YAK   ++ A  +F  M  ++II+WNT+I G+  N  
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           P + L  F ++++ E++PD  TL+  L +CA ++SL  GK++HG++L+N   S   + NA
Sbjct: 181 PNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y KCG    +  +F+M+  KD I+W  +I+ Y  HG G  A++ F  M+  G I+P
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAG-IEP 298

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+ +F ++L ACSH+GL+D+G R F+ M ++    P  +H +C++DLL R+G L  A + 
Sbjct: 299 DEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I S  I+  +  W AL S C  H +++L   +A  + E E +    YVLL+N YA A  W
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKW 418

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           EE   +R+ + R G+ K PGCSWI
Sbjct: 419 EEVKKLRQKIGRRGLKKNPGCSWI 442



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 186/416 (44%), Gaps = 53/416 (12%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           + + L ACAN  + + G  +H   ++A +       NT+L +Y                 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMY----------------- 43

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
                          K G +D A  VFD M  R +  + ++I      G  D  I LF E
Sbjct: 44  --------------AKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHE 89

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  V  D ++  +VL  C   G LE G+ +H+ + ++     + V NAL+ MY  CG+
Sbjct: 90  MDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGS 149

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA  VF E    V D IS+N M+ G +      EAL  F DM V  ++P   T   ++
Sbjct: 150 MEDANSVFLEMP--VKDIISWNTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACIL 206

Query: 299 SACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
            AC        G +VH   +++GF +   V+NA + MY  CG    A ++F  +  KD++
Sbjct: 207 PACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLI 266

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
           +W  MI+ Y     G +AI  + EM+  GI PDE +F S+L   + SG ++       + 
Sbjct: 267 TWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLD-----EGWR 321

Query: 413 FINGIITNIQVSNAL------ISAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
           F N +     V   L      +   A++ ++  AY+   +M    +   W  L++G
Sbjct: 322 FFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/436 (22%), Positives = 179/436 (41%), Gaps = 84/436 (19%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R G   +A+ LF ++     + PDI++++T L ACA   +   G  +H Y     
Sbjct: 71  IAAYAREGLSDEAIRLFHEM-DREGVSPDIFTITTVLHACACNGSLENGKDVHNYIREND 129

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +++   V N ++ +Y     +     VF E+   D+ SW                     
Sbjct: 130 MQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISW--------------------- 168

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                     N MI G ++N   +  + LF +M  L+++ D  + A +L  C +   L+ 
Sbjct: 169 ----------NTMIGGYSKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDR 217

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+++H  + ++GF     V NAL+ MY  CG  V A  +F+       D I++ VM+ G 
Sbjct: 218 GKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTK--DLITWTVMIAGY 275

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
              G    A+  F +M  A + P E++F+S++ AC                         
Sbjct: 276 GMHGFGNNAITTFNEMRQAGIEPDEVSFISILYAC------------------------- 310

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVG 384
                  S  G +DE    F  +Q++  V             L RS  L  AY  ++S+ 
Sbjct: 311 -------SHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP 363

Query: 385 IRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNA-----LISAYAKNER 436
           I PD   +G+LL+       +++ E +   VF       ++  N      L + YA+ E+
Sbjct: 364 IEPDATIWGALLSGCRIHHDVKLAEKVAEHVF------ELEPENTGYYVLLANTYAEAEK 417

Query: 437 IKQAYQIFHNMSPRNI 452
            ++  ++   +  R +
Sbjct: 418 WEEVKKLRQKIGRRGL 433



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 69/282 (24%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   S++    +AL LF  +    ++KPD  +L+  L ACA+L +   G ++H
Sbjct: 165 IISWNTMIGGYSKNSLPNEALSLFGDM--VLEMKPDGTTLACILPACASLASLDRGKEVH 222

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + LR G  +   VAN ++ +Y      V  + +F  I   D+ +WT             
Sbjct: 223 GHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTV------------ 270

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                              MI G   +G+ +  I  F EM +  +  D  SF S+L  C 
Sbjct: 271 -------------------MIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            +GLL+ G +                       +FN   + D C V  + + Y C     
Sbjct: 312 HSGLLDEGWR-----------------------FFNV--MQDECNVKPKLEHYAC----- 341

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             ++D LA  G++  A    + M    + P    + +++S C
Sbjct: 342 --IVDLLARSGKLAMAYKFIKSM---PIEPDATIWGALLSGC 378


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/518 (34%), Positives = 279/518 (53%), Gaps = 44/518 (8%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVS-VMSA-CLCPR-VGYQ 309
           D +SYN ++ G +  G    A+  +  +L A  S+RPS +T  + VM+A  L  R +G Q
Sbjct: 102 DTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQ 161

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSS-------------------------------CGK 338
            H Q ++ GF     V +  + MY+                                C  
Sbjct: 162 FHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKM 221

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           ++EA  +F  + ++D ++W TM++ + Q  L   A+  +  M+  GI  D++TFGS+L +
Sbjct: 222 VEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTA 281

Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            G +  +E    IHA++       N+ V +AL+  Y+K   IK A   F  MS +NII+W
Sbjct: 282 CGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISW 341

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             LI G+  NG   + ++ FSE+    + PD++TL   +SSCA ++SL  G Q H   L 
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALV 401

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           + L+  +++ NA++TLY KCG ++ + R+F+ M+  D +SW AL++ YAQ G  KE +  
Sbjct: 402 SGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDL 461

Query: 576 FKAM--QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           F+ M  +DV   KPD  TF  VLSACS AG V+ G   F SM  D+G +P +DH +CM+D
Sbjct: 462 FEKMLAKDV---KPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMID 518

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           L  R+G L EAE  I    +   +  W  L SAC   G++ +G+  A  LLE +   P+ 
Sbjct: 519 LYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPAS 578

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YVLL +++A  G W + A +R  ++   V K+PGCSWI
Sbjct: 579 YVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWI 616



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 247/558 (44%), Gaps = 46/558 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVK 112
           +P     +  L+A A     A G  LH   LR      P H+ N +L+ Y  A      +
Sbjct: 3   RPLSSQYAALLSAAARTEPHAAG-ALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARAR 61

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF    +P+++++   LS       +D    +F  M  RD   YNA+I G +  G    
Sbjct: 62  RVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHAR 121

Query: 173 GIGLFREMHKL--DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            + L+  + +    VR    + ++++    A G    GRQ H  + + GF     V + L
Sbjct: 122 AVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPL 181

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE--------------- 274
           + MY   G + DA +VF+E  G   + + YN M+ GL     VEE               
Sbjct: 182 VGMYAKMGLIGDAKRVFDEMDGK--NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCIT 239

Query: 275 ----------------ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
                           AL  FR M    +   + TF S+++AC        G Q+HA  +
Sbjct: 240 WTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYII 299

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++ ++    V +A + MYS C  I  A   F R+  K+I+SW  +I  Y Q      A+ 
Sbjct: 300 RTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVR 359

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYA 432
            + EMQ  GI PD+FT GS+++S   +  +E     H    ++G++  I VSNAL++ Y 
Sbjct: 360 VFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYG 419

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K   I+ A+++F  M   + ++W  L+ G+   G   + +  F ++L  +++PD  T   
Sbjct: 420 KCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIG 479

Query: 493 ALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIE 550
            LS+C+R   +  G    H     + ++        MI LY++ G L +    +  M + 
Sbjct: 480 VLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMH 539

Query: 551 KDTISWNALISAYAQHGE 568
            D I W  L+SA    G+
Sbjct: 540 PDAIGWGTLLSACRLRGD 557



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 221/453 (48%), Gaps = 14/453 (3%)

Query: 25  NISLANLSRSGHYQDALHLF-VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  +A  S  G +  A+ L+   + +   ++P   ++S  + A + L + A G Q H   
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           LR G      V + ++ +Y     +   KRVF E+   +V  + T ++   +   V+ A 
Sbjct: 167 LRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEAR 226

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
            +F+ M DRD   +  M+TG T+NG E   +  FR M    +  D Y+F S+L+ C A  
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNV 261
            LE G+Q+H+ + ++ +   V V +AL+ MY  C ++  A   F       C + IS+  
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMS---CKNIISWTA 343

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++ G    G  EEA+  F +M    + P + T  SV+S+C        G Q H  A+ SG
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 403

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
              Y +VSNA +T+Y  CG I++A  +F  +   D VSW  +++ YAQ    +  I  + 
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFE 463

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKN 434
           +M +  ++PD  TF  +L++   +GF+E      H+    +GI+        +I  Y+++
Sbjct: 464 KMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRS 523

Query: 435 ERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
            R+K+A +    M    + I W TL++   L G
Sbjct: 524 GRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556


>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
 gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 209/642 (32%), Positives = 337/642 (52%), Gaps = 36/642 (5%)

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-DRDLPV-YNAMITGCTENG 168
           +KR  +   +  + + T   ++C +   V+ A  VFD++P  R  P+ ++ MI     N 
Sbjct: 26  LKRSLTLSSSTVLVNLTRLYASCNE---VELARHVFDEIPHPRINPIAWDLMIRAYASND 82

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVV 226
           + +  + L+ +M    VR   Y++  VL  C AGL  ++ G+ +HS V  S F+  + V 
Sbjct: 83  FAEKALDLYYKMLNSGVRPTKYTYPFVLKAC-AGLRAIDDGKLIHSHVNCSDFATDMYVC 141

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VA 285
            AL+  Y  CG +  A KVF+E      D +++N M+ G +    + + +  F DM  + 
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKR--DMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199

Query: 286 SLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            L P+  T V +  A       R G  VH    + GF     V    + +Y+        
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK-----SK 254

Query: 343 CMIFARLQ-----EKDIVSWNTMISTYAQRNLGRSAILAYLEM----QSVGIRPDEFTFG 393
           C+I+AR       +K+ V+W+ MI  Y +  + + A   + +M        + P     G
Sbjct: 255 CIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIG 312

Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
            +L   A  G +     +H +    G I ++ V N +IS YAK   +  A++ F  +  +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           ++I++N+LI G ++N  P +  + F E+  S +RPD  TL   L++C+ +++L HG   H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
           GY + +      S+ NA++ +Y KCG LD + RVF+ M ++D +SWN ++  +  HG GK
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV-NDYGFIPAEDHLS 629
           EA+S F +MQ+ G + PD+ T  A+LSACSH+GLVD+G ++F+SM   D+  IP  DH +
Sbjct: 493 EALSLFNSMQETG-VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
           CM DLL RAGYLDEA   +N    +        L SAC  + N  LG  ++  +    + 
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET 611

Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             S+ VLLSN Y+AA  WE+AA IR + K+ G++K PG SW+
Sbjct: 612 TESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 149/591 (25%), Positives = 261/591 (44%), Gaps = 58/591 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           + AL L+ ++ +S  ++P  Y+    L ACA LR    G  +H++   +      +V   
Sbjct: 85  EKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTA 143

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++  Y    +L    +VF E                               MP RD+  +
Sbjct: 144 LVDFYAKCGELEMAIKVFDE-------------------------------MPKRDMVAW 172

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS--FASVLSVCDAGLLEFGRQLHSLVT 215
           NAMI+G + +      IGLF +M ++D    N S       ++  AG L  G+ +H   T
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           + GFS  + V   ++ +Y     ++ A +VF+    +  + ++++ M+ G      ++EA
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIGGYVENEMIKEA 290

Query: 276 LIRFRDML----VASLRPSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVS 326
              F  ML    VA + P  +  + +     C R      G  VH  A+K+GF    +V 
Sbjct: 291 GEVFFQMLVNDNVAMVTPVAIGLILMG----CARFGDLSGGRCVHCYAVKAGFILDLTVQ 346

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           N  I+ Y+  G + +A   F+ +  KD++S+N++I+          +   + EM++ GIR
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD  T   +L +   +  +      H +  ++G   N  + NAL+  Y K  ++  A ++
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M  R+I++WNT++ GF ++G   + L  F+ +  + + PDE TL   LS+C+    +
Sbjct: 467 FDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLV 526

Query: 504 RHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
             GKQ+   + +   N+I ++   N M  L A+ G LD +    N M  E D      L+
Sbjct: 527 DEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLL 586

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           SA   +   +      K MQ +G         +   SA   A   +D  RI
Sbjct: 587 SACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSA---AERWEDAARI 634



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 191/440 (43%), Gaps = 42/440 (9%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  N  ++  S      D + LF+ +     L P++ ++     A         G 
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y  R G      V   IL +Y  ++ ++  +RVF      +  +W+  +    +  
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENE 285

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
            +  A EVF +M   D     AM+T         + IGL                  ++ 
Sbjct: 286 MIKEAGEVFFQMLVND---NVAMVT--------PVAIGLI-----------------LMG 317

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
               G L  GR +H    K+GF   ++V N +I+ Y   G++ DA + F E    + D I
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG--LKDVI 375

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           SYN ++ G     R EE+   F +M  + +RP   T + V++AC        G   H   
Sbjct: 376 SYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYC 435

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G+   TS+ NA + MY+ CGK+D A  +F  + ++DIVSWNTM+  +    LG+ A+
Sbjct: 436 VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL 495

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN----GIITNIQVSNAL 427
             +  MQ  G+ PDE T  ++L++   SG ++  E    F  ++     +I  I   N +
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVD--EGKQLFNSMSRGDFNVIPRIDHYNCM 553

Query: 428 ISAYAKNERIKQAYQIFHNM 447
               A+   + +AY   + M
Sbjct: 554 TDLLARAGYLDEAYDFVNKM 573


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 180/586 (30%), Positives = 306/586 (52%), Gaps = 12/586 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           M  R L  +N ++   + + + +  +  F +M + + + DN++    L  C +   +++G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 208 RQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
             +H  + K+      + V ++LI MY  CG + +A ++F E +    D ++++ M+ G 
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEK--PDIVTWSSMVSGF 118

Query: 267 ASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAY 322
              G   +A+  FR M  AS + P  +T ++++SAC      R+G  VH   M+ GF   
Sbjct: 119 EKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSND 178

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            S+ N+ +  Y+      EA  +F  + EKD++SW+T+I+ Y Q      A+  + EM  
Sbjct: 179 LSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMID 238

Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G  P+  T   +L   A++  +E     H      G+ T ++VS AL+  Y K    ++
Sbjct: 239 DGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEE 298

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCA 498
           AY +F  +  +++++W  LI+GF LNG   + ++ FS +L+ +  RPD   +   L SC+
Sbjct: 299 AYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCS 358

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            +  L+  +  H YV+K    S   +G +++ LY++CG L  + +VFN +  KDT+ W +
Sbjct: 359 ELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTS 418

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           LI+ Y  HG+G +A+  F  M     +KP++ TF ++LSACSHAGL+ +G RIF+ MVND
Sbjct: 419 LITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVND 478

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           Y   P  +H + ++DLLGR G LD A  +               L  AC  H N  +   
Sbjct: 479 YRLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAET 538

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           +A  L E E +    Y+L+SN+Y   G WE    +R  +K+ G+ K
Sbjct: 539 VAKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKK 584



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/543 (24%), Positives = 250/543 (46%), Gaps = 44/543 (8%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           +K  L + N  L +LSR  H++  +  F Q+    + KPD ++L   L AC  LR   +G
Sbjct: 2   TKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEE-KPDNFTLPVALKACGELREVKYG 60

Query: 77  NQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
             +H +  +   L +  +V ++++ +Y     +    R+F+E++ PD+ +W++ +S   K
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G    A E F +M                                  DV  D  +  ++
Sbjct: 121 NGSPYQAVEFFRRMATAS------------------------------DVTPDRVTLITL 150

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           +S C        GR +H  V + GFS  +S+VN+L+  Y       +A  +F+       
Sbjct: 151 VSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEK-- 208

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           D IS++ ++      G   EAL  F +M+     P+  T + V+ AC        G + H
Sbjct: 209 DVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAANDLEQGRKTH 268

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A++ G E    VS A + MY  C   +EA  +F+R+ +KD+VSW  +IS +    +  
Sbjct: 269 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNGMAH 328

Query: 372 SAILAY-LEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
            +I  + + +     RPD      +L S    GF++  E  H++V   G  +N  +  +L
Sbjct: 329 RSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIGASL 388

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPD 486
           +  Y++   +  A ++F+ ++ ++ + W +LI G+ ++G   + L+ F+ ++  SE++P+
Sbjct: 389 VELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEVKPN 448

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           E T    LS+C+    +  G +I   ++ +  L   +     ++ L  + G+LD ++ + 
Sbjct: 449 EVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAIEIT 508

Query: 546 NMM 548
             M
Sbjct: 509 KRM 511



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 174/402 (43%), Gaps = 43/402 (10%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           R+T  +   +   K  ++  +  ++   ++G    A+  F ++ ++  + PD  +L T +
Sbjct: 92  RMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLV 151

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           +AC  L N+  G  +H + +R G      + N++L+ Y  +R       +F  +   DV 
Sbjct: 152 SACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVI 211

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SW+T +           AC V +      L V+N MI   TE     +            
Sbjct: 212 SWSTVI-----------ACYVQNGAAAEALRVFNEMIDDGTEPNVATV------------ 248

Query: 185 VRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
                     VL  C A   LE GR+ H L  + G    V V  AL+ MY  C +  +A 
Sbjct: 249 --------LCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL 302
            VF        D +S+  ++ G    G    ++  F  ML+  + RP  +  + V+ +  
Sbjct: 301 AVFSRIPKK--DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGS-- 356

Query: 303 CPRVGYQ-----VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C  +G+       H+  +K GF++   +  + + +YS CG +  A  +F  +  KD V W
Sbjct: 357 CSELGFLKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVW 416

Query: 358 NTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS 398
            ++I+ Y     G  A+  +  M +S  ++P+E TF S+L++
Sbjct: 417 TSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSA 458


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 286/515 (55%), Gaps = 16/515 (3%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           + N ++ MY  CG++  A ++F+E      + +S+  ++ G A  GR  E    FR ML+
Sbjct: 102 LTNHVVNMYAKCGSLDYAHQMFDEMPEK--NIVSWTALVSGYAQHGRSNECFRVFRGMLI 159

Query: 285 ASLRPSELTFVSVMSACLCP-RVGYQVHAQAMKSGFEAYTSVSNAAITMY-SSCGKIDEA 342
              +P+E  F SV+SAC      G QVHA A+K+ F++   V NA I MY  SCG  DEA
Sbjct: 160 WH-QPTEFAFASVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEA 218

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT----FGSLLAS 398
             ++  +  +++VSWN+MI+ +     G  A+  + +M   GIR D  T    F  L   
Sbjct: 219 WNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGM 278

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPR-NIITWN 456
              +E    +       G I  I+V+ AL+ AY+     +   Y+IF  +  R ++++W 
Sbjct: 279 GDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWT 338

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I  F     P + L  F + L   L PD +  S+ L +CA +++ RH   +  +VLK 
Sbjct: 339 GIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKV 397

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                + L NA+I   A+CG +  S +VF+ M  +DT+SWN+++ AYA HG+GKEA+  F
Sbjct: 398 GFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLF 457

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M      +PD ATF A+LSACSHAG+ ++G +IF++M N++G +P  DH +CM+D+LG
Sbjct: 458 SQMD----AQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILG 513

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           RAG + EA+ +I+   ++  S  W AL  +C  HG  +L ++ A  L E + +    YVL
Sbjct: 514 RAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNNSLGYVL 573

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SNI+   G + EA  IR  ++   V K+PG SWI
Sbjct: 574 MSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWI 608



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/555 (26%), Positives = 266/555 (47%), Gaps = 51/555 (9%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L   GH Q+AL LF  I     L    ++ +    ACA   +   G  LH +        
Sbjct: 37  LCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHM------- 89

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
           + H  N+  +L+               + N  V  +        K G +DYA ++FD+MP
Sbjct: 90  FLHNPNSDFNLF---------------LTNHVVNMYA-------KCGSLDYAHQMFDEMP 127

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQL 210
           ++++  + A+++G  ++G  +    +FR M  +  +   ++FASV+S C  G    GRQ+
Sbjct: 128 EKNIVSWTALVSGYAQHGRSNECFRVFRGM-LIWHQPTEFAFASVISAC-GGDDNCGRQV 185

Query: 211 HSLVTKSGFSCLVSVVNALITMYF-NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           H+L  K+ F   V V NALI MY  +CG   +A  V+ EA G+  + +S+N M+ G    
Sbjct: 186 HALALKTSFDSCVYVGNALIMMYCKSCGGADEAWNVY-EAMGFR-NLVSWNSMIAGFQVC 243

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-----RVGYQVHAQAMKSGFEAYTS 324
           G    AL  F  M V  +R    T VS+ S CLC         +Q+    +K+GF     
Sbjct: 244 GCGNRALELFSQMHVGGIRFDRATLVSIFS-CLCGMGDGLECCFQLQCLTIKTGFILKIE 302

Query: 325 VSNAAITMYSSC-GKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           V+ A +  YSS  G++ +   IF  L   +D+VSW  +I+ +A+R+  + A++ + +   
Sbjct: 303 VATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLR 361

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             + PD   F  +L +   +        + + V   G   +I ++NALI A A+   +  
Sbjct: 362 ECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVAL 421

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           + Q+F  M  R+ ++WN+++  + ++G   + L  FS++   + +PD  T    LS+C+ 
Sbjct: 422 SKQVFDKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQM---DAQPDGATFVALLSACSH 478

Query: 500 ISSLRHGKQIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWN 557
                 G +I   +  N+ ++ ++     M+ +  + G +  +  + + M +E D++ W+
Sbjct: 479 AGMAEEGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWS 538

Query: 558 ALISAYAQHGEGKEA 572
           AL+ +  +HGE K A
Sbjct: 539 ALLGSCRKHGETKLA 553



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 196/446 (43%), Gaps = 54/446 (12%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +P  ++ ++ ++AC    N   G Q+HA AL+    +  +V N ++ +Y           
Sbjct: 162 QPTEFAFASVISACGGDDNC--GRQVHALALKTSFDSCVYVGNALIMMY----------- 208

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                              C   G  D A  V++ M  R+L  +N+MI G    G  +  
Sbjct: 209 -------------------CKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRA 249

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALI 230
           + LF +MH   +R D  +  S+ S C  G+   LE   QL  L  K+GF   + V  AL+
Sbjct: 250 LELFSQMHVGGIRFDRATLVSIFS-CLCGMGDGLECCFQLQCLTIKTGFILKIEVATALV 308

Query: 231 TMYFNCGNVVDAC-KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
             Y + G  V  C ++F E  G   D +S+  ++   A     ++AL+ FR  L   L P
Sbjct: 309 KAYSSLGGEVSDCYRIFLELDGRQ-DVVSWTGIIAAFAERDP-KKALVIFRQFLRECLAP 366

Query: 290 SELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
               F  V+ AC      R    V +  +K GFE    ++NA I   + CG +  +  +F
Sbjct: 367 DRHMFSIVLKACAGLATERHALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVF 426

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            ++  +D VSWN+M+  YA    G+ A+L + +M +   +PD  TF +LL++     M E
Sbjct: 427 DKMGSRDTVSWNSMLKAYAMHGQGKEALLLFSQMDA---QPDGATFVALLSACSHAGMAE 483

Query: 407 ----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN--MSPRNIITWNTLIN 460
               +       +GI+  +     ++    +  +I +A ++     M P +++ W+ L+ 
Sbjct: 484 EGAKIFETMSNNHGIVPQLDHYACMVDILGRAGQISEAKELIDKMPMEPDSVV-WSALLG 542

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPD 486
               +G     L   + + + EL P+
Sbjct: 543 SCRKHG--ETKLAKLAAVKLKELDPN 566


>gi|242056803|ref|XP_002457547.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
 gi|241929522|gb|EES02667.1| hypothetical protein SORBIDRAFT_03g009160 [Sorghum bicolor]
          Length = 762

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 197/589 (33%), Positives = 315/589 (53%), Gaps = 18/589 (3%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSV--CDAGLLEFGR 208
           R+   +  M+     +G     + LFR+M  + +   D+ +  +VL+V  CD G      
Sbjct: 100 RNAKTWTIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVLNVPGCDVG------ 153

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            LH +VTK GF   V V N L+  Y   G +  A +VF E      D I+YN M+ G + 
Sbjct: 154 TLHPVVTKLGFGASVVVCNTLLDAYCKQGFIAAARRVFLEMPHR--DSITYNAMIMGCSR 211

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
            GR  EAL  F  M    +  S  TF S+++     +   +G Q+H   +++       V
Sbjct: 212 QGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVDLHLGRQIHGLFVRANPSCNVFV 271

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +NA +  YS C  + +   +F  + E+D VS+N MIS  +    G  A+  + +MQ++G 
Sbjct: 272 NNALLDFYSKCDSLGDLKQLFDEMSERDNVSYNVMISACSWNRCGGMALQLFRDMQTLGF 331

Query: 386 RPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
                 + SLL+ +G +  +++   IHA + ++G+     V NALI  Y+K   +  A  
Sbjct: 332 DRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLTLEDFVGNALIDMYSKCGMLDAAKT 391

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF   S +  I+W  LI G + NG   + LQ F ++  + L PD  T S  + S + ++ 
Sbjct: 392 IFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDMRRAGLSPDRATCSSIMKSSSSLAV 451

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +  G+Q+H Y+ K+  +  +  G+A++ +YAKCG LD ++R FN M EK++I+WNA+ISA
Sbjct: 452 IGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCLDEAIRTFNEMPEKNSITWNAVISA 511

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YAQ+G+ K A+  F +M   G + PD  TF +VL+AC H GL ++  + FD M   Y   
Sbjct: 512 YAQYGQAKNAIRMFDSMLHCG-LCPDPVTFLSVLAACGHNGLAEECMKYFDLMRYYYSMS 570

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P ++H SC++D LGRAG  D+ ++VI+    +     W ++  +C  +GN  L  + A  
Sbjct: 571 PWKEHYSCVIDTLGRAGCFDKIQKVIDEMPFEDDPIIWSSILHSCRIYGNQDLATVAAEK 630

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L        + YV+LSNIYA AG WE AA ++++++  GV K+ G SW+
Sbjct: 631 LFTMVPTDATAYVILSNIYAKAGNWEGAARVKKIMRDRGVKKESGNSWV 679



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 221/481 (45%), Gaps = 45/481 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            I +  L   G   DA+ LF  +    +  PD  +++T L    N+     G  LH    
Sbjct: 106 TIMMRMLPADGRGSDAVSLFRDMLREGEASPDDVTITTVL----NVPGCDVGT-LHPVVT 160

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  A   V NT+L  Y                                K G +  A  
Sbjct: 161 KLGFGASVVVCNTLLDAY-------------------------------CKQGFIAAARR 189

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           VF +MP RD   YNAMI GC+  G     + LF  M +  V   +++F+S+L+V    + 
Sbjct: 190 VFLEMPHRDSITYNAMIMGCSRQGRHGEALELFAAMRREGVDTSHFTFSSLLTVATGMVD 249

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GRQ+H L  ++  SC V V NAL+  Y  C ++ D  ++F+E      D++SYNVM+
Sbjct: 250 LHLGRQIHGLFVRANPSCNVFVNNALLDFYSKCDSLGDLKQLFDEMSER--DNVSYNVMI 307

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS-ACLCP--RVGYQVHAQAMKSGFE 320
              +       AL  FRDM         L + S++S A   P  ++G Q+HAQ +  G  
Sbjct: 308 SACSWNRCGGMALQLFRDMQTLGFDRRTLPYASLLSVAGALPHIKIGRQIHAQLILHGLT 367

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V NA I MYS CG +D A  IFA   +K  +SW  +I+   Q      A+  + +M
Sbjct: 368 LEDFVGNALIDMYSKCGMLDAAKTIFAYKSDKTAISWTALITGCVQNGQNEEALQLFCDM 427

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +  G+ PD  T  S++ SS  + ++     +HA++  +G + ++   +AL+  YAK   +
Sbjct: 428 RRAGLSPDRATCSSIMKSSSSLAVIGIGRQLHAYLTKSGHMPSVFSGSALLDMYAKCGCL 487

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A + F+ M  +N ITWN +I+ +   G     ++ F  +L   L PD  T    L++C
Sbjct: 488 DEAIRTFNEMPEKNSITWNAVISAYAQYGQAKNAIRMFDSMLHCGLCPDPVTFLSVLAAC 547

Query: 498 A 498
            
Sbjct: 548 G 548


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 212/673 (31%), Positives = 344/673 (51%), Gaps = 50/673 (7%)

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           + L AC++L     G  +HA  L+ G  +     N++L  Y                   
Sbjct: 55  SILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSVLDFY------------------- 94

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                        K G +D A  VFD M  RD   +N MI G    G  D G+  FR+  
Sbjct: 95  ------------MKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQAR 142

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            +    +  +    +  C + G +E G ++H  + +SGF  + SV N+L++MY +  ++ 
Sbjct: 143 VIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDME 201

Query: 241 DACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSV 297
            A ++F+E    +C  D IS++VM+ G    G  + AL  F +M   AS+    +T VSV
Sbjct: 202 RAEELFDE----MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 257

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + AC       +G  VH   +  G +    V N+ I MYS C   + A   F  +  ++ 
Sbjct: 258 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 317

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAF 411
           VSWN++IS   +      A+  +  M   G R DE T  +LL S  +       + IH+ 
Sbjct: 318 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSI 377

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V   G   N  V N+LI AY+K + I+ A+++F  +  ++ ++W+ +I GF   G P + 
Sbjct: 378 VIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEA 437

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           +  F E+  ++ +P+  T+   L + +  + L+  K  HG  ++  L +++++G A++ +
Sbjct: 438 IALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDM 497

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG++  S + F+ + EK+ +SW A+I+A   +G  ++A++    M+  G +KP+  T
Sbjct: 498 YAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHG-LKPNVVT 556

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
             +VLSACSH GLV++G   F++MV D+G  P  +H SCM+D+L RAG L+ A  +I   
Sbjct: 557 TLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKM 616

Query: 652 HIQARSDN--WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
             + R     W AL SAC + GN RLG   A  +LE E    + Y L S++YAA+GLW +
Sbjct: 617 PERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWAD 676

Query: 710 AANIRELLKRTGV 722
           AA +R L+K  GV
Sbjct: 677 AARMRWLVKARGV 689



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 257/574 (44%), Gaps = 54/574 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            +P++ +L   + AC +L     G ++H Y +R+G    P V N++LS+Y +  D+   +
Sbjct: 146 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 204

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            +F E+   DV SW+                                MI G  + G   +
Sbjct: 205 ELFDEMCERDVISWSV-------------------------------MIGGYVQTGEAKM 233

Query: 173 GIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
            + LF EM     +  D  +  SVL  C + G +  GR +H +V   G    + V N++I
Sbjct: 234 ALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSII 293

Query: 231 TMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            MY  C +   A K F E     C + +S+N ++ GL    +  EAL  F  M  A  R 
Sbjct: 294 DMYSKCDDHESAFKAFNEMP---CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRA 350

Query: 290 SELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            E+T V+++ +C   + P     +H+  ++ G+E    V N+ I  YS C  I+ A  +F
Sbjct: 351 DEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLF 410

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
            RL+ KD VSW+ MI+ +        AI  + EM     +P+  T  SLL +   S  ++
Sbjct: 411 DRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLK 470

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             +  H      G+   + V  A++  YAK   I  + + F  +  +NI++W  +I    
Sbjct: 471 RSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACG 530

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-M 522
           +NG     L   SE+ +  L+P+  T    LS+C+    +  G      +++++ +   +
Sbjct: 531 MNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGL 590

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTIS-WNALISAYAQHGEGK-EAVSCFKA 578
              + M+ + ++ G L+ ++ +   M E  +D    W AL+SA    G  +  A + F+ 
Sbjct: 591 EHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRV 650

Query: 579 MQDVGRIKPD-QATFTAVLSACSHAGLVDDGTRI 611
           ++    ++P   A +    S  + +GL  D  R+
Sbjct: 651 LE----LEPQSSAGYFLASSMYAASGLWADAARM 680



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 219/439 (49%), Gaps = 18/439 (4%)

Query: 274 EALIRFRDMLVASLRPSELTFV-SVMSAC--LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           EA  R+  M  A  + ++ T V S++ AC  L  R G  +HA  +K GF++ TS  N+ +
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSIHASLLKQGFDSLTSTGNSVL 91

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
             Y   G +D A  +F  ++ +D VSWN MI  +  R      +  + + + +   P+  
Sbjct: 92  DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVS 151

Query: 391 TFGSLLA-----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           T   +LA     S G +E    +H ++  +G +    V N+L+S YA N+ +++A ++F 
Sbjct: 152 TL--VLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFD 208

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLR 504
            M  R++I+W+ +I G++  G     LQ F E+   + +  D  T+   L +CA    + 
Sbjct: 209 EMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDIS 268

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+ +HG V+   L   + +GN++I +Y+KC D + + + FN M  ++T+SWN++IS   
Sbjct: 269 MGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLV 328

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD-GTRIFDSMVNDYGFIP 623
           +  +  EA+S F +M   G  + D+ T   +L +C +   VD    +   S+V  +G+  
Sbjct: 329 RTEKHSEALSLFYSMGKAG-FRADEVTLVNLLQSCKY--FVDPFQCKFIHSIVIRWGYEL 385

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
            E  ++ ++D   +   ++ A ++ +   ++ +    W+   A   H       I     
Sbjct: 386 NEFVINSLIDAYSKCDLIELAWKLFD--RLKTKDTVSWSAMIAGFNHCGKPDEAIALFQE 443

Query: 684 LEREQDKPSVYVLLSNIYA 702
           + + Q+KP+   +LS + A
Sbjct: 444 MNQAQEKPNGVTILSLLEA 462



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 200/438 (45%), Gaps = 41/438 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  ++ +    ++G  + AL LF+++ S+  ++ D  ++ + L ACAN  + + G  +H
Sbjct: 215 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 274

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +  GL     V N+I+ +Y    D  S  + F+E                       
Sbjct: 275 GVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNE----------------------- 311

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                   MP R+   +N++I+G          + LF  M K   R D  +  ++L  C 
Sbjct: 312 --------MPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 363

Query: 201 AGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             +  F  + +HS+V + G+     V+N+LI  Y  C  +  A K+F+  K    D +S+
Sbjct: 364 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLK--TKDTVSW 421

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           + M+ G    G+ +EA+  F++M  A  +P+ +T +S++ A       +     H  A++
Sbjct: 422 SAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 481

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G  A  +V  A + MY+ CG+I  +   F ++ EK+IVSW  MI+      L R A+  
Sbjct: 482 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 541

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF----VFINGIITNIQVSNALISAYA 432
             EM+  G++P+  T  S+L++     +VE   +F    V  +G+   ++  + ++   +
Sbjct: 542 LSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLS 601

Query: 433 KNERIKQAYQIFHNMSPR 450
           +  ++  A  +   M  R
Sbjct: 602 RAGKLNSAMNLIEKMPER 619



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 132/263 (50%), Gaps = 6/263 (2%)

Query: 354 IVSWNTMISTYAQRNLGRS--AILAYLEMQSVGIR-PDEFTFGSLLA--SSGFIEMVEMI 408
           + +WN  I     R    S  A   Y +M+  G +  D     S+L   SS  +   + I
Sbjct: 12  LPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGKSI 71

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA +   G  +     N+++  Y K   +  A  +F +M  R+ ++WN +I+G L  G  
Sbjct: 72  HASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGAS 131

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            +GL  F +  +    P+  TL +A+ +C  + ++  G ++HGY++++  +   S+ N++
Sbjct: 132 DKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSL 191

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +++YA   D++ +  +F+ M E+D ISW+ +I  Y Q GE K A+  F  M     I+ D
Sbjct: 192 LSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELD 250

Query: 589 QATFTAVLSACSHAGLVDDGTRI 611
             T  +VL AC++ G +  G  +
Sbjct: 251 GITMVSVLKACANTGDISMGRSV 273


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 205/680 (30%), Positives = 333/680 (48%), Gaps = 43/680 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +++T + +C  L +   G Q+    +++GL     VAN+++S++ N              
Sbjct: 162 AMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDS----------- 210

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                               ++ A  VFD M +RD   +N++IT    NG+ +  +  F 
Sbjct: 211 --------------------IEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFS 250

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M     + D  + +++L VC  A  L +GR LH +V KSG    V V N+L++MY   G
Sbjct: 251 QMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAG 310

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              DA  VF + +    D IS+N MM      G    AL    +ML      + +TF + 
Sbjct: 311 KSEDAEFVFHKMRER--DLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTA 368

Query: 298 MSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           +SAC        VHA  +  G      + NA +TMY   G +  A  +   + ++D V+W
Sbjct: 369 LSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTW 428

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM------IHAF 411
           N +I  +A      +AI A+  ++  G+  +  T  +LL  S F+   ++      IHA 
Sbjct: 429 NALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLL--SAFLSPDDLLDHGMPIHAH 486

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           + + G      V ++LI+ YA+   +  +  IF  ++ +N  TWN +++     G   + 
Sbjct: 487 IVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEA 546

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L+   ++    +  D+++ SVA +    ++ L  G+Q+H  ++K+   S   + NA + +
Sbjct: 547 LKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDM 606

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y KCG++D   R+      +   SWN LISA A+HG  ++A   F  M D+G ++PD  T
Sbjct: 607 YGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLG-LRPDHVT 665

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F ++LSACSH GLVD+G   F SM   +G     +H  C++DLLGRAG L EAE  IN  
Sbjct: 666 FVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKM 725

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
            +      W +L +AC  HGNL L R  A  L E +    S YVL SN+ A+   W +  
Sbjct: 726 PVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVE 785

Query: 712 NIRELLKRTGVIKQPGCSWI 731
           N+R+ ++   + K+P CSW+
Sbjct: 786 NVRKQMESHNIKKKPACSWV 805



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 188/662 (28%), Positives = 336/662 (50%), Gaps = 55/662 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN---LRNAAFGNQLHAYAL 84
           ++   R G YQ A+  F  +   H ++P  Y  ++ + AC     +   AF  Q+HA+ +
Sbjct: 30  MSGFVRVGWYQKAMQFFCHM-LEHGVRPSSYVAASLVTACDRSGCMTEGAF--QVHAHVI 86

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     V  ++L  Y     +  V  VF EI+ P++ SWT+ +        V YA  
Sbjct: 87  KCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLM--------VGYA-- 136

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                       YN    GC +       + ++R + +  V  +  + A+V+  C  G+L
Sbjct: 137 ------------YN----GCVKE-----VMSVYRRLRRDGVYCNENAMATVIRSC--GVL 173

Query: 205 ---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
                G Q+   V KSG    VSV N+LI+M+ NC ++ +A  VF++ K    D IS+N 
Sbjct: 174 VDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKER--DTISWNS 231

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSG 318
           ++      G  E++L  F  M     +   +T  +++  C      R G  +H   +KSG
Sbjct: 232 IITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSG 291

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            E+   V N+ ++MYS  GK ++A  +F +++E+D++SWN+M++++        A+   +
Sbjct: 292 LESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLI 351

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           EM       +  TF + L++   +E ++++HAFV + G+  N+ + NAL++ Y K   + 
Sbjct: 352 EMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMA 411

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++   M  R+ +TWN LI G   N  P   ++ F+ LL  E  P  Y   V L S A
Sbjct: 412 AAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFN-LLREEGVPVNYITIVNLLS-A 469

Query: 499 RISS---LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            +S    L HG  IH +++      +  + +++IT+YA+CGDL+ S  +F+++  K++ +
Sbjct: 470 FLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSST 529

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA++SA A +G G+EA+     M++ G I  DQ +F+   +   +  L+D+G ++  S+
Sbjct: 530 WNAILSANAHYGPGEEALKLIIKMRNDG-IHLDQFSFSVAHAIIGNLTLLDEGQQL-HSL 587

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
           +  +GF   +  L+  +D+ G+ G +D+  R++     +++  +W  L SA A HG  + 
Sbjct: 588 IIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQR-SWNILISALARHGFFQQ 646

Query: 676 GR 677
            R
Sbjct: 647 AR 648



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 283/547 (51%), Gaps = 17/547 (3%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           +K G +++A  VFDKMP+R+   +N +++G    G+    +  F  M +  VR  +Y  A
Sbjct: 3   SKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAA 62

Query: 194 SVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           S+++ CD    + E   Q+H+ V K G +C V V  +L+  Y   G V +   VF+E + 
Sbjct: 63  SLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEE 122

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGY 308
              + +S+  +M G A  G V+E +  +R +    +  +E    +V+ +C   +   +GY
Sbjct: 123 --PNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           QV    +KSG +   SV+N+ I+M+ +C  I+EA  +F  ++E+D +SWN++I+      
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
               ++  + +M+    + D  T  +LL   G  + +     +H  V  +G+ +N+ V N
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +L+S Y++  + + A  +FH M  R++I+WN+++   + NG   + L+   E+L +    
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  T + ALS+C  + +L   K +H +V+   L   + +GNA++T+Y K G +  + RV 
Sbjct: 361 NYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVC 417

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA-CSHAGL 604
            +M ++D ++WNALI  +A + E   A+  F  +++ G +  +  T   +LSA  S   L
Sbjct: 418 KIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEG-VPVNYITIVNLLSAFLSPDDL 476

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           +D G  I   +V   GF       S ++ +  + G L+ +  + +       S  W A+ 
Sbjct: 477 LDHGMPIHAHIVVA-GFELETFVQSSLITMYAQCGDLNTSNYIFDVL-ANKNSSTWNAIL 534

Query: 665 SACAAHG 671
           SA A +G
Sbjct: 535 SANAHYG 541



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/483 (27%), Positives = 238/483 (49%), Gaps = 25/483 (5%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY   G++  A  VF++      +  S+N +M G   VG  ++A+  F  ML   +RPS 
Sbjct: 1   MYSKFGSIEHAQHVFDKMPER--NEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSS 58

Query: 292 LTFVSVMSACL---CPRVG-YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
               S+++AC    C   G +QVHA  +K G      V  + +  Y + G + E  M+F 
Sbjct: 59  YVAASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFK 118

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
            ++E +IVSW +++  YA     +  +  Y  ++  G+  +E    +++ S G   +V+ 
Sbjct: 119 EIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGV--LVDK 176

Query: 408 IHAF-----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           +  +     V  +G+ T + V+N+LIS +   + I++A  +F +M  R+ I+WN++I   
Sbjct: 177 MLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITAS 236

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + NG   + L++FS++  +  + D  T+S  L  C    +LR G+ +HG V+K+ L S +
Sbjct: 237 VHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNV 296

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + N+++++Y++ G  + +  VF+ M E+D ISWN++++++  +G    A+     M   
Sbjct: 297 CVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQT 356

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
            R   +  TFT  LSAC +     +  +I  + V   G        + ++ + G+ G + 
Sbjct: 357 -RKATNYVTFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMA 411

Query: 643 EAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
            A+RV     I    D   W AL    A   N      I    L RE+  P  Y+ + N+
Sbjct: 412 AAQRVCK---IMPDRDEVTWNALIGGHA--DNKEPNAAIEAFNLLREEGVPVNYITIVNL 466

Query: 701 YAA 703
            +A
Sbjct: 467 LSA 469



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 13/181 (7%)

Query: 12  GNSNTSK---ELLLKLNISLAN--LSRSGHY---QDALHLFVQIHSSHKLKPDIYSLSTT 63
           G+ NTS    ++L   N S  N  LS + HY   ++AL L +++ +   +  D +S S  
Sbjct: 510 GDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRND-GIHLDQFSFSVA 568

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
            A   NL     G QLH+  ++ G ++  +V N  + +Y    ++  V R+  + ++   
Sbjct: 569 HAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQ 628

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPD----RDLPVYNAMITGCTENGYEDIGIGLFRE 179
            SW   +SA  + G    A E F +M D     D   + ++++ C+  G  D G+  F  
Sbjct: 629 RSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYFSS 688

Query: 180 M 180
           M
Sbjct: 689 M 689


>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
 gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 198/686 (28%), Positives = 342/686 (49%), Gaps = 44/686 (6%)

Query: 55  PDIYSLSTTLAACAN-LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           P+ + L + + AC N +    FG  +H +AL+ G++  P V+ ++LS Y           
Sbjct: 152 PNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFY----------- 200

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                                K+G +  A  VF+ + + D+  +NAMI G  + GY    
Sbjct: 201 --------------------AKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEA 240

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           I     M +  +  D Y+F +V+  C   G   FGRQ+H L+ +S       V+NAL+ M
Sbjct: 241 IVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDM 300

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           YF  G +     VF+  K +  D +++N +    +     ++    F   L+ S+RP+ +
Sbjct: 301 YFKNGGMKSGLVVFK--KMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHI 358

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF  +   C   L   +G Q    A+  G     ++++A I M+S CGK++ A ++F   
Sbjct: 359 TFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKSK 418

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVE 406
             ++I+ WN +IS Y        A+  + ++  +G+  +E+TF ++L +    E   M  
Sbjct: 419 VSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQLMNR 478

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH   F +G  ++  V ++LI  Y K   +  + ++F+ +   ++  W T+I+ F+  G
Sbjct: 479 QIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQG 538

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +  + ++  + L+ +  +PDE+ L   LSSCA   +    K +H  ++K      + + +
Sbjct: 539 WDCEAIRSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSVHSLIIKLGFEGHVFVAS 598

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           A++  YAKCGD+  +   FN   +  D + +NA+I AYA HG   EA+  +  M+ +  +
Sbjct: 599 AVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMK-LANL 657

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P QATF +V++AC H G V+ G R+F SM + YG  P+ D   C++D+  R GYL++A+
Sbjct: 658 QPSQATFVSVIAACGHIGHVEKGCRLFKSM-DLYGMEPSPDIYGCLVDMFSRNGYLEDAK 716

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           ++I S    A      +L S C  +GN  LG   A  LL+      + + LL  +Y+  G
Sbjct: 717 QIIESLPYPAWPAILRSLLSGCRMYGNRELGEWAAKKLLQLVPHNDAAHALLFKVYSELG 776

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            WE+AA +R  +   G+ K PG SWI
Sbjct: 777 NWEDAAKMRREMAERGLRKDPGHSWI 802



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 181/763 (23%), Positives = 331/763 (43%), Gaps = 95/763 (12%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHK---LKPDIYSLS 61
           R+T+ +      SK++    NI L NL +       L+  +   SS     +  D  +LS
Sbjct: 5   RLTSKLKTFFQFSKKVYKFNNIQLKNLHQ-------LYSPISTKSSCSGFFIGKDSVALS 57

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
             L+ C N ++   G Q+H Y ++ G  +   V+N ++  Y                   
Sbjct: 58  KALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFY------------------- 98

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                        K   + Y   VFD M +R++  +  M+ G  +    ++G+ +F EM 
Sbjct: 99  ------------AKGAVLRYGFNVFDGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMI 146

Query: 182 KLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           +     + +   SV+  C   +    FG  +H    K G      V  ++++ Y   G++
Sbjct: 147 RDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNPFVSCSVLSFYAKLGDI 206

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A +VFE  +    D   +N M+ G A  G   EA++    M    +   + TF++V+ 
Sbjct: 207 GAAERVFESLEE--VDVGCWNAMIGGYAQCGYGFEAIVTASLMRRKGIFMDKYTFINVIQ 264

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C        G Q+H   ++S  E    V NA + MY   G +    ++F ++ ++D+V+
Sbjct: 265 GCSLLGDFNFGRQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVT 324

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN- 415
           WNT+  +++Q    +     +       +RP+  TF  L    G +  +++   F  +  
Sbjct: 325 WNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDLGLQFCCLAL 384

Query: 416 --GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G+     +++ALI+ +++  +++ A+ +F +    NII WN LI+G+ LN    + L+
Sbjct: 385 HFGLFDEANITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALK 444

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F +LL   +  +EYT S  L +C+R  +    +QIHG   K+   S   + +++I  Y 
Sbjct: 445 TFYDLLQLGVEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYI 504

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG LD SL+VFNM+   D  +W  +ISA+   G   EA+     + + G  KPD+    
Sbjct: 505 KCGLLDDSLKVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGE-KPDEFILG 563

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINS 650
           ++LS+C+ + +    T+   S++   GF   E H+   S +LD   + G +  A+   N 
Sbjct: 564 SILSSCA-STVAYCQTKSVHSLIIKLGF---EGHVFVASAVLDAYAKCGDIQSAKMAFNQ 619

Query: 651 Q-----------------------------------HIQARSDNWWALFSACAAHGNLRL 675
                                               ++Q     + ++ +AC   G++  
Sbjct: 620 SCKSSDVVIYNAMIIAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGHVEK 679

Query: 676 G-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
           G R+   + L   +  P +Y  L ++++  G  E+A  I E L
Sbjct: 680 GCRLFKSMDLYGMEPSPDIYGCLVDMFSRNGYLEDAKQIIESL 722


>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
 gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
          Length = 917

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 197/681 (28%), Positives = 350/681 (51%), Gaps = 42/681 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++ G   +AL  F ++       PD  +  T L AC++     FG  L+   L
Sbjct: 274 NAIVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECIL 333

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G   +  V N I+++Y                            S+C   G +D A  
Sbjct: 334 QCGYDTHLIVGNCIMTMY----------------------------SSC---GRIDNAAA 362

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
            F  M +RD   +N +I+G  + G+ D  + LFR M    +  D ++F S++       +
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIID--GTARM 420

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           +  + L  L+ +SG    V +V+ALI M+   GNV +A  +F++ K    D + +  ++ 
Sbjct: 421 QEAKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDR--DIVMWTSIIS 478

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
                G  ++AL   R M +  L  ++ T V+ ++AC        G  +H+ A++ GF A
Sbjct: 479 SYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAA 538

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             +V NA I MY+ CG ++EA ++F +   K++VSWNT+ + Y QR+  R A+  + EMQ
Sbjct: 539 SPAVGNALINMYAKCGCLEEADLVFHQCG-KNLVSWNTIAAAYVQRDKWREALQLFQEMQ 597

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
             G++ D+ +F ++L           IH  +   G+ ++  VS AL++ Y  ++ + +A 
Sbjct: 598 LEGLKADKVSFVTVLNGCSSASEGSKIHNILLETGMESDHIVSTALLNMYTASKSLDEAS 657

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS--SCAR 499
           +IF  M  R+I++WN +I G   +G   + +Q F  + +  + PD+ +    L+  S + 
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSGSS 717

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
            SSL+  + +   +      +   +GNA+++++ + G L  + R F  + E+D  SWN +
Sbjct: 718 PSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNVI 777

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++A+AQHGE ++A+  F+ MQ     +PD  T  +VLSACSH GL+++G   F SM  ++
Sbjct: 778 VTAHAQHGEVEQALKLFRRMQQESS-RPDSITLVSVLSACSHGGLIEEGYYHFTSMGREF 836

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G   +++H  C++DLL RAG LD+AE ++    + A    W  L SAC   G+ +  + +
Sbjct: 837 GIAGSQEHYGCVVDLLARAGRLDQAEELLRKMPVPASYVLWMTLLSACKVQGDEKRAKRV 896

Query: 680 AGLLLEREQDKPSVYVLLSNI 700
           A  ++E +  +P+ YV+LS++
Sbjct: 897 AERVMELDPRRPAAYVVLSSV 917



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 179/629 (28%), Positives = 323/629 (51%), Gaps = 55/629 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD  +  T L  C    + + G  LH + L AGL+    V  +++ +Y     +   +
Sbjct: 99  LAPDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDAR 158

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-PDRDLP---VYNAMITGCTENG 168
           RVF ++   DV SWT+ +    +      A E+F +M P   LP    Y   I+ C    
Sbjct: 159 RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISAC---- 214

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
                                   A V S+ D      G+ +HS V + GF   V V  A
Sbjct: 215 ------------------------AHVESMAD------GKLIHSQVLEDGFESDVVVSCA 244

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASL 287
           ++ MY  CG++ DA +VFE       + +S+N ++      G   EAL  F+ M L    
Sbjct: 245 IVNMYGKCGSLEDAREVFERMPHP--NTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGS 302

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P ++TF+++++AC  P     G  ++   ++ G++ +  V N  +TMYSSCG+ID A  
Sbjct: 303 TPDKVTFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAA 362

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
            F+ + E+D +SWNT+IS +AQ      A+  +  M + GI PD+FTF S++  +  ++ 
Sbjct: 363 FFSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGITPDKFTFISIIDGTARMQE 422

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            +++   +  +G+  ++ + +ALI+ +++   +++A  +F +M  R+I+ W ++I+ ++ 
Sbjct: 423 AKILSELMVESGVELDVFLVSALINMHSRYGNVREARSLFDDMKDRDIVMWTSIISSYVQ 482

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           +G     L     + +  L  +++TL  AL++CA +++L  GK IH + ++    +  ++
Sbjct: 483 HGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTALSEGKLIHSHAIERGFAASPAV 542

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GNA+I +YAKCG L+ +  VF+    K+ +SWN + +AY Q  + +EA+  F+ MQ  G 
Sbjct: 543 GNALINMYAKCGCLEEADLVFH-QCGKNLVSWNTIAAAYVQRDKWREALQLFQEMQLEG- 600

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRAGYLD 642
           +K D+ +F  VL+ CS A    +G++I + ++ + G     DH+  + +L++   +  LD
Sbjct: 601 LKADKVSFVTVLNGCSSA---SEGSKIHNILL-ETGM--ESDHIVSTALLNMYTASKSLD 654

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHG 671
           EA R+ +    +    +W A+ +  A HG
Sbjct: 655 EASRIFSRMEFRDIV-SWNAMIAGKAEHG 682



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 187/684 (27%), Positives = 335/684 (48%), Gaps = 57/684 (8%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++  S  L P+  + +T ++ACA++ + A G  +H+  L  G ++   V+  I
Sbjct: 187 EALELFHRMRPSGVL-PNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSCAI 245

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +++Y     L   + VF  + +P+  SW   ++ACT+ G    A   F +M         
Sbjct: 246 VNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQ-------- 297

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
            +  G T                      D  +F ++L+ C +   L FG  L+  + + 
Sbjct: 298 -LQGGSTP---------------------DKVTFITILNACSSPATLTFGELLYECILQC 335

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G+   + V N ++TMY +CG + +A   F        D IS+N ++ G A  G  +EA+ 
Sbjct: 336 GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVER--DAISWNTIISGHAQAGFCDEAVH 393

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            FR ML   + P + TF+S++      +    +    ++SG E    + +A I M+S  G
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARMQEAKILSELMVESGVELDVFLVSALINMHSRYG 453

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL- 396
            + EA  +F  ++++DIV W ++IS+Y Q      A+     M+  G+  ++FT  + L 
Sbjct: 454 NVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALN 513

Query: 397 --ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
             AS   +   ++IH+     G   +  V NALI+ YAK   +++A  +FH    +N+++
Sbjct: 514 ACASLTALSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG-KNLVS 572

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+   ++      + LQ F E+ +  L+ D+ +    L+ C   SS   G +IH  +L
Sbjct: 573 WNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGC---SSASEGSKIHNILL 629

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           +  + S   +  A++ +Y     LD + R+F+ M  +D +SWNA+I+  A+HG  +EA+ 
Sbjct: 630 ETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQ 689

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVD-DGTRIFDSMVNDYGFIPAEDHLSCMLD 633
            F+ MQ  G + PD+ +F  VL+A S +        R+ + +++D G+       + ++ 
Sbjct: 690 MFQRMQLEG-VAPDKISFVTVLNAFSGSSPSSLKQARLVEKLISDQGYETDTIVGNAIVS 748

Query: 634 LLGRAGYLDEAERVINSQHIQAR-SDNWWALFSACAAHGN----LRLGRIIAGLLLEREQ 688
           + GR+G L EA R    + I+ R + +W  + +A A HG     L+L R      +++E 
Sbjct: 749 MFGRSGRLAEARRAF--ERIRERDAASWNVIVTAHAQHGEVEQALKLFR-----RMQQES 801

Query: 689 DKPSVYVLLSNIYAAA--GLWEEA 710
            +P    L+S + A +  GL EE 
Sbjct: 802 SRPDSITLVSVLSACSHGGLIEEG 825



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 154/594 (25%), Positives = 280/594 (47%), Gaps = 46/594 (7%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  CA     A G  +H+    +  +    V N  + +Y     +     VF  + +P  
Sbjct: 9   LGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSLDHPSQ 68

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SW + L+A  + G    A ++F +M  + L                             
Sbjct: 69  VSWNSLLAAFARDGQFQQAFQIFQRMKLQGLA---------------------------- 100

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               D  +F +VL  C A G L  G+ LH  V ++G    V V  +LI MY  CG V DA
Sbjct: 101 ---PDRITFVTVLDGCTATGDLSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDA 157

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+  K  + D +S+  M+       R  EAL  F  M  + + P+ +T+ + +SAC 
Sbjct: 158 RRVFD--KLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACA 215

Query: 303 CPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                  G  +H+Q ++ GFE+   VS A + MY  CG +++A  +F R+   + VSWN 
Sbjct: 216 HVESMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNA 275

Query: 360 MISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFIN 415
           +++   Q      A+  +  MQ   G  PD+ TF ++L   +S   +   E+++  +   
Sbjct: 276 IVAACTQHGCCVEALWYFQRMQLQGGSTPDKVTFITILNACSSPATLTFGELLYECILQC 335

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G  T++ V N +++ Y+   RI  A   F  M  R+ I+WNT+I+G    GF  + +  F
Sbjct: 336 GYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTMVERDAISWNTIISGHAQAGFCDEAVHLF 395

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             +L   + PD++T    +   AR   ++  K +   ++++ +   + L +A+I ++++ 
Sbjct: 396 RRMLAEGITPDKFTFISIIDGTAR---MQEAKILSELMVESGVELDVFLVSALINMHSRY 452

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  +  +F+ M ++D + W ++IS+Y QHG   +A+ C + M+  G +  D    TA 
Sbjct: 453 GNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTA- 511

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           L+AC+    + +G ++  S   + GF  +    + ++++  + G L+EA+ V +
Sbjct: 512 LNACASLTALSEG-KLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFH 564



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 226/439 (51%), Gaps = 16/439 (3%)

Query: 293 TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF++++  C        G  VH++   S F     V NA I MY  CG +++A  +F  L
Sbjct: 4   TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
                VSWN++++ +A+    + A   +  M+  G+ PD  TF ++L    ++G +   +
Sbjct: 64  DHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGDLSRGK 123

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           ++H FV   G+  N+ V  +LI  Y K   ++ A ++F  ++ +++++W ++I  ++ + 
Sbjct: 124 LLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMTYVQHD 183

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
             V+ L+ F  +  S + P+  T + A+S+CA + S+  GK IH  VL++   S + +  
Sbjct: 184 RCVEALELFHRMRPSGVLPNRITYATAISACAHVESMADGKLIHSQVLEDGFESDVVVSC 243

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +Y KCG L+ +  VF  M   +T+SWNA+++A  QHG   EA+  F+ MQ  G   
Sbjct: 244 AIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGST 303

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDE 643
           PD+ TF  +L+ACS    +  G  +++ ++   G+   + HL   +C++ +    G +D 
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLYECILQ-CGY---DTHLIVGNCIMTMYSSCGRIDN 359

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           A    ++  ++  + +W  + S  A  G       +   +L  E   P  +  +S I   
Sbjct: 360 AAAFFSTM-VERDAISWNTIISGHAQAGFCDEAVHLFRRMLA-EGITPDKFTFISIIDGT 417

Query: 704 AGLWEEAANIRELLKRTGV 722
           A + +EA  + EL+  +GV
Sbjct: 418 ARM-QEAKILSELMVESGV 435



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 2/169 (1%)

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  T    L  CA+ S++  G+ +H  V  +       + NA I +Y KCG ++ ++ VF
Sbjct: 1   DRGTFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVF 60

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +     +SWN+L++A+A+ G+ ++A   F+ M+  G + PD+ TF  VL  C+  G +
Sbjct: 61  QSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQG-LAPDRITFVTVLDGCTATGDL 119

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
             G ++    V + G        + ++ + G+ G +++A RV +   +Q
Sbjct: 120 SRG-KLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQ 167


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 197/613 (32%), Positives = 322/613 (52%), Gaps = 15/613 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRR 187
            + A  K+G V +A  VFD MP R+   +NA+I G  + G     + +F  M +   V  
Sbjct: 89  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 148

Query: 188 DNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFS----CLVSVVNALITMYFNCGNVVDA 242
           D +++  V+  C A G +  GR++  +V     S      V V  AL+ M+  CG + +A
Sbjct: 149 DGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEA 208

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
             VFE  +  V D  ++  M+ G    G   E +  F  M         L   +V+SAC 
Sbjct: 209 RNVFESMQ--VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACG 266

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                +VG  +H  A+KSG      VSNA + MY  CG ++ A  +F     KD+VSW++
Sbjct: 267 RAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSS 326

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
           +I  Y+Q  +   ++  + EM S+GI P+  T  S+L     ++++   + IH F   +G
Sbjct: 327 LIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHG 386

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  +  V +ALI  Y+K   I+ A  IF     +++  WN+++ G+ +NG+         
Sbjct: 387 LERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALR 446

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            L    L+PD  T+   L  C +   L  GK++H YV+K  + S  S+ NA++ +Y KCG
Sbjct: 447 LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCG 506

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            L+ +  VF +M E++T+++N LIS++ +H    +A+S F  M+  G I PD+ TF A+L
Sbjct: 507 FLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG-IAPDKVTFVALL 565

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           S CSHAGL+D G  ++ SM++DY   P ++H SC++DL  R G LDEA   +++   +  
Sbjct: 566 SCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPE 625

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
            D    L +AC  H  + +  ++   + E+  + P  ++LLSNIYA AG+W +   IR +
Sbjct: 626 IDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTM 685

Query: 717 LKRTGVIKQPGCS 729
           ++   + K+ G S
Sbjct: 686 IQERNLKKETGNS 698



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 245/539 (45%), Gaps = 39/539 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L  +G + +AL +F  + +   +  D ++    + ACA L            A+
Sbjct: 118 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALG-----------AV 166

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G K +  V   I S   NAR              P+V+     +    K G +D A  
Sbjct: 167 AQGRKVWEMVEADIAS--GNAR--------------PNVFVQCALVDMFAKCGCLDEARN 210

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF+ M  RDL  + AMI G   +G     + LF  M       D+   A+V+S C  AG 
Sbjct: 211 VFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGE 270

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G  LH    KSG S  + V NAL+ MY  CG V  A  +F        D +S++ ++
Sbjct: 271 LQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK--DVVSWSSLI 328

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGF 319
            G +  G    ++  F +M+   + P+  T  S++  CL      R G ++H  +++ G 
Sbjct: 329 VGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILP-CLSVLKLIRSGKEIHCFSIRHGL 387

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E    V +A I +YS  G I  A  IF    +KD+  WN+M++ YA      SA  A   
Sbjct: 388 ERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRL 447

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +Q VG++PD  T  S+L       M+   + +HA+V    I +   V+NAL+  Y K   
Sbjct: 448 LQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGF 507

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A ++F  M+ RN +T+N LI+ F  +    Q L  F  +    + PD+ T    LS 
Sbjct: 508 LEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSC 567

Query: 497 CARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           C+    +  G  ++  +L + N+  +    + ++ LY++CG LD +    + M E+  I
Sbjct: 568 CSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI 626



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 214/451 (47%), Gaps = 15/451 (3%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R+LH+ V   G      +V  L+  Y   G+V  A +VF+       +  ++N ++ GL 
Sbjct: 68  RRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRR--NSFAWNAVIKGLV 125

Query: 268 SVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLC-------PRVGYQVHAQAMKSGF 319
             GR  EAL  F  M+   S+     T+  V+ AC          +V   V A       
Sbjct: 126 DAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIASGNA 185

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V  A + M++ CG +DEA  +F  +Q +D+ +W  MI            +  +  
Sbjct: 186 RPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNH 245

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+S G   D     +++++   +G +++   +H     +G   +I VSNAL+  Y K   
Sbjct: 246 MRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGC 305

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A  +F + + +++++W++LI G+  NG     +  F E++   + P+  TL+  L  
Sbjct: 306 VEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPC 365

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + +  +R GK+IH + +++ L     + +A+I LY+K G +  +  +F + ++KD   W
Sbjct: 366 LSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIW 425

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N++++ YA +G    A    + +Q VG +KPD  T  +VL  C+   ++  G  +  + V
Sbjct: 426 NSMVAGYAVNGYSDSAFCALRLLQKVG-LKPDHVTVVSVLPLCNQHHMLIQGKELH-AYV 483

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
             Y         + +LD+  + G+L+ A+ V
Sbjct: 484 IKYCINSVCSVNNALLDMYCKCGFLEVAKEV 514



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           +L + L SC      +  +++H  VL         L   ++  YAK GD+  +LRVF+ M
Sbjct: 53  SLLLRLQSC---PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 109

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +++ +WNA+I      G   EA+  F  M + G +  D  T+  V+ AC+  G V  G
Sbjct: 110 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 169

Query: 609 TRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            ++++ +  D     A  ++     ++D+  + G LDEA  V  S  ++  +  W A+  
Sbjct: 170 RKVWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLA-AWTAMIG 228

Query: 666 ACAAHGN 672
                GN
Sbjct: 229 GTVHSGN 235


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 187/716 (26%), Positives = 365/716 (50%), Gaps = 39/716 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   + G ++++  +F Q+H +  L P++ ++ + L  C++      G+ +H
Sbjct: 307 LVSYNSMISAYMQHGKWKESFDVFRQMHCA-GLGPNLVTVISVLPTCSDFFGVNLGDSVH 365

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ GL     V + ++S+Y                               +K+G +D
Sbjct: 366 GMVIKFGLAEQISVVSALVSMY-------------------------------SKLGELD 394

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  +FD   +++  ++N++I+G   N   ++ +  F +M   +V  D  +   V+  C 
Sbjct: 395 SAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCR 454

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L   + +H+   ++ F    SV+NAL+ MY +CG +  + K+F++ +  +   IS+
Sbjct: 455 HIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRML--ISW 512

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
           N ++ G A +  +E ++  F  M    L+   +T + ++S+        VG  +H+ A+K
Sbjct: 513 NTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVK 572

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG     S++N  ITMYS+CG ++    +F  L  ++ VS+N +++ Y + NL    +  
Sbjct: 573 SGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPL 632

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           + +M      P+  T  +LL      +  + +H +   N          + I  Y++   
Sbjct: 633 FRQMVKNEQEPNHITVLNLLPVCQNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNN 692

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  + ++F+++  RNII WN +++  +           F ++    ++PDE T+   +S+
Sbjct: 693 VDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSA 752

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA++ +   G+ +   +L+      + + NA+I ++++CG L  +  +F+  + KD+++W
Sbjct: 753 CAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTW 812

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           +A+I++Y+ HG+ + A++ F  M D G +KPD  TF  +LSACSH+G V+    +F S+ 
Sbjct: 813 SAMINSYSMHGDCESALAIFSMMIDSG-VKPDDITFVIILSACSHSGFVEQARALFKSLQ 871

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            D+G  P  +H +CM+DLLGR+G+LDEA  V+ S   +       +L  AC  HGN ++G
Sbjct: 872 IDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIG 931

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
             +  LL++ +   P  YV+LSNIYA+ G W +   +R  ++  G+ K  G S +G
Sbjct: 932 EAVGNLLIDSQHGNPRSYVMLSNIYASVGKWNDYEWLRVDMEAKGLRKDAGVSLVG 987



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 176/707 (24%), Positives = 339/707 (47%), Gaps = 53/707 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G  ++A+    Q      ++ +  +L     AC    ++  G  LH
Sbjct: 206 LISWNAMISGYSLNGSLREAVEA-TQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLH 264

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+AL+ G+     +A  ++SLY    DL S + +F      D+ S+ + +SA  + G   
Sbjct: 265 AFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWK 324

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
              E FD                            +FR+MH   +  +  +  SVL  C 
Sbjct: 325 ---ESFD----------------------------VFRQMHCAGLGPNLVTVISVLPTCS 353

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D   +  G  +H +V K G +  +SVV+AL++MY   G +  A  +F+       +++ +
Sbjct: 354 DFFGVNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEK--NNLLW 411

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           N ++ G         AL  F  M + ++ P   T + V+  C      R+   +HA A++
Sbjct: 412 NSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVR 471

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           + FE   SV NA + MY  CG++  +  +F +++ + ++SWNT+IS YA+     +++  
Sbjct: 472 NRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKL 531

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M+  G++ D  T   L++S    E   + E +H+    +G   +I ++N LI+ Y+ 
Sbjct: 532 FFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSN 591

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              ++   ++F N+S RN +++N L+ G+  N    + L  F +++ +E  P+  T+   
Sbjct: 592 CGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNL 651

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  C    + + GK +H Y ++N    + S   + I +Y++  ++D S ++FN + E++ 
Sbjct: 652 LPVC---QNHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNI 708

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           I WNA++SA  Q      A   F+ M  +  +KPD+ T  +++SAC+  G  D G  +  
Sbjct: 709 IVWNAILSACVQCKLADTAFDFFRQMHFL-NMKPDEVTMMSLVSACAQLGNSDLGECV-T 766

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +++   GF      ++ ++D+  R G L  A  + +S  ++  S  W A+ ++ + HG+ 
Sbjct: 767 ALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVK-DSVTWSAMINSYSMHGDC 825

Query: 674 RLGRIIAGLLLEREQDKPS--VYVLLSNIYAAAGLWEEAANIRELLK 718
                I  ++++    KP    +V++ +  + +G  E+A   R L K
Sbjct: 826 ESALAIFSMMIDSGV-KPDDITFVIILSACSHSGFVEQA---RALFK 868



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 171/716 (23%), Positives = 309/716 (43%), Gaps = 74/716 (10%)

Query: 8   ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAAC 67
           A++   +   +  +  LN+++   S  G +++ L L+  + +      D ++    + AC
Sbjct: 94  ASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTLCT---FGSDNFTFPPVIKAC 150

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT 127
           A +     G ++H   LR G +    V   +L +Y  A  + + + VF  +   D+ SW 
Sbjct: 151 AAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQKDLISWN 210

Query: 128 TFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR 187
                                          AMI+G + NG     +   +EM +  +R 
Sbjct: 211 -------------------------------AMISGYSLNGSLREAVEATQEMQQDGMRA 239

Query: 188 DNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           +  +   +   C  AG  + G  LH+   K G     S+  ALI++Y    ++  +  +F
Sbjct: 240 NASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLF 299

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LC 303
           +    +V D +SYN M+      G+ +E+   FR M  A L P+ +T +SV+  C     
Sbjct: 300 DLQ--HVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFG 357

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
             +G  VH   +K G     SV +A ++MYS  G++D A  +F    EK+ + WN++IS 
Sbjct: 358 VNLGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISG 417

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITN 420
           Y   N    A+  + +MQ   + PD  T   ++     I+   M + IHA+   N    N
Sbjct: 418 YLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELN 477

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
             V NAL++ Y     +  +Y++F  M  R +I+WNT+I+G+         ++ F ++  
Sbjct: 478 QSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQ 537

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             L+ D  TL   +SS +       G+ +H   +K+     +SL N +IT+Y+ CG ++ 
Sbjct: 538 EGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEA 597

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
             R+F+ +  ++T+S+N L++ Y ++   +E +  F+ M      +P+  T   +L  C 
Sbjct: 598 CQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVK-NEQEPNHITVLNLLPVCQ 656

Query: 601 --------HAGLVDD----GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL------- 641
                   H   + +     T  F S +  Y      D+   + + +G    +       
Sbjct: 657 NHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILS 716

Query: 642 --------DEAERVINSQH-IQARSD--NWWALFSACAAHGNLRLGRIIAGLLLER 686
                   D A       H +  + D     +L SACA  GN  LG  +  L+L++
Sbjct: 717 ACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQK 772



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 234/475 (49%), Gaps = 14/475 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           G    A  VF     R   VY  N  +   +++G+    + L+R +       DN++F  
Sbjct: 88  GRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTLCTFG--SDNFTFPP 145

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V+  C A   L  GR++H  V ++G    V V  AL+ MY   G +  +  VF+      
Sbjct: 146 VIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWIGASRTVFDFMGQK- 204

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            D IS+N M+ G +  G + EA+   ++M    +R +  T V +  AC        G  +
Sbjct: 205 -DLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSL 263

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA A+K G     S++ A I++Y++   +  + ++F     KD+VS+N+MIS Y Q    
Sbjct: 264 HAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKW 323

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS-SGF--IEMVEMIHAFVFINGIITNIQVSNAL 427
           + +   + +M   G+ P+  T  S+L + S F  + + + +H  V   G+   I V +AL
Sbjct: 324 KESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQISVVSAL 383

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S Y+K   +  A  +F + + +N + WN++I+G+L+N      L  F ++ +  + PD 
Sbjct: 384 VSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDA 443

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   +  C  I  LR  K IH Y ++N      S+ NA++ +Y  CG+L  S ++F  
Sbjct: 444 TTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQK 503

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           M  +  ISWN +IS YA+  + + +V  F  M+  G ++ D  T   ++S+ S A
Sbjct: 504 MEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEG-LQFDVVTLIGLISSISVA 557



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 169/370 (45%), Gaps = 25/370 (6%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           TSV  A +  Y S G+   A  +FA    +   + S N  +  ++     R  +  Y  +
Sbjct: 74  TSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYRTL 133

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
            + G   D FTF  ++ +   +  + +   +H  V   G   N+ V  AL+  YAK   I
Sbjct: 134 CTFG--SDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAGWI 191

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             +  +F  M  +++I+WN +I+G+ LNG   + ++   E+    +R +  TL     +C
Sbjct: 192 GASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGAC 251

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
                   G  +H + LK  ++   SL  A+I+LYA   DL  S  +F++   KD +S+N
Sbjct: 252 GAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYN 311

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++ISAY QHG+ KE+   F+ M   G + P+  T  +VL  CS    V+ G  +   MV 
Sbjct: 312 SMISAYMQHGKWKESFDVFRQMHCAG-LGPNLVTVISVLPTCSDFFGVNLGDSV-HGMVI 369

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            +G       +S ++ +  + G LD A+                 LF +C    NL    
Sbjct: 370 KFGLAEQISVVSALVSMYSKLGELDSAKH----------------LFDSCTEKNNLLWNS 413

Query: 678 IIAGLLLERE 687
           II+G L+  E
Sbjct: 414 IISGYLVNNE 423


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 270/525 (51%), Gaps = 36/525 (6%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +HS +      C  S+   L+  Y +  +V  A KVF+E      + I  NVM+    
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSYV 116

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTS 324
           + G   E +  F  M   ++RP   TF  V+ AC C     +G ++H  A K G  +   
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  ++MY  CG + EA ++   +  +D+VSWN+++  YAQ      A+    EM+SV 
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           I  D  T  SLL +                   ++N    N +   Y K+        +F
Sbjct: 237 ISHDAGTMASLLPA-------------------VSNTTTENVM---YVKD--------MF 266

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +++++WN +I  ++ N  PV+ ++ +S +      PD  +++  L +C   S+L 
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK+IHGY+ +  LI  + L NA+I +YAKCG L+ +  VF  M  +D +SW A+ISAY 
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
             G G +AV+ F  +QD G + PD   F   L+ACSHAGL+++G   F  M + Y   P 
Sbjct: 387 FSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +HL+CM+DLLGRAG + EA R I    ++     W AL  AC  H +  +G + A  L 
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +   ++   YVLLSNIYA AG WEE  NIR ++K  G+ K PG S
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 244/526 (46%), Gaps = 43/526 (8%)

Query: 98  ILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +L  Y + R L +V  R+  E    +       + A   +  V  A +VFD++P+R++ +
Sbjct: 48  VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
            N MI     NG+   G+ +F  M   +VR D+Y+F  VL  C  +G +  GR++H   T
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G S  + V N L++MY  CG + +A  V +E      D +S+N ++ G A   R ++A
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDA 225

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           L   R+M    +     T  S++ A                    + T+  N    MY  
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAV-------------------SNTTTEN---VMYVK 263

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
                    +F ++ +K +VSWN MI  Y +  +   A+  Y  M++ G  PD  +  S+
Sbjct: 264 --------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315

Query: 396 LASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L + G    + + + IH ++    +I N+ + NALI  YAK   +++A  +F NM  R++
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++W  +I+ +  +G     +  FS+L  S L PD       L++C+    L  G+     
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435

Query: 513 VLKNNLIS-KMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGK 570
           +  +  I+ ++     M+ L  + G +  + R + +M +E +   W AL+ A   H +  
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
             +    A   + ++ P+Q+ +  +LS   + AG  ++ T I + M
Sbjct: 496 IGLL---AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 176/361 (48%), Gaps = 18/361 (4%)

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           S+ L  LE+     +   F  G +L +   I  +  +H+ + +  +  N  +   L+ AY
Sbjct: 25  SSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAY 84

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A  + +  A ++F  +  RN+I  N +I  ++ NGF  +G++ F  +    +RPD YT  
Sbjct: 85  ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +C+   ++  G++IHG   K  L S + +GN ++++Y KCG L  +  V + M  +
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SWN+L+  YAQ+    +A+   + M+ V +I  D  T  ++L A S+       T  
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESV-KISHDAGTMASLLPAVSN-------TTT 256

Query: 612 FDSM-VNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALF 664
            + M V D  F   +  L   + M+ +  +     EA  +   + +   +  + +  ++ 
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGV 722
            AC     L LG+ I G  +ER++  P++ +   L ++YA  G  E+A ++ E +K   V
Sbjct: 317 PACGDTSALSLGKKIHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375

Query: 723 I 723
           +
Sbjct: 376 V 376



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 77/416 (18%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N+ + +   +G Y + + +F  +   + ++PD Y+    L AC+       G ++H  A
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF-------------L 130
            + GL +   V N ++S+Y     L   + V  E+   DV SW +              L
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226

Query: 131 SACTKMGHVD------------------------YACEVFDKMPDRDLPVYNAMITGCTE 166
             C +M  V                         Y  ++F KM  + L  +N MI    +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSV 225
           N      + L+  M       D  S  SVL  C D   L  G+++H  + +      + +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
            NALI MY  CG +  A  VFE  K    D +S+  M+      GR  +A+  F  +  +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR--DVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACM 344
            L P  + FV+ ++AC         HA  ++ G   +  +++     Y    +++  ACM
Sbjct: 405 GLVPDSIAFVTTLAAC--------SHAGLLEEGRSCFKLMTDH----YKITPRLEHLACM 452

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFGSLLAS 398
           +       D+              LGR+  +  AY  +Q + + P+E  +G+LL +
Sbjct: 453 V-------DL--------------LGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 68/285 (23%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L+  N+ +    ++    +A+ L+ ++ +    +PD  S+++ L AC +    + G 
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGK 329

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H Y  R  L     + N ++ +Y     L   + VF  +++ DV SWT  +SA     
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA----- 384

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                              Y     GC         + LF ++    +  D+ +F + L+
Sbjct: 385 -------------------YGFSGRGCD-------AVALFSKLQDSGLVPDSIAFVTTLA 418

Query: 198 VCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C  AGLLE GR    L+T                         D  K+    +   C  
Sbjct: 419 ACSHAGLLEEGRSCFKLMT-------------------------DHYKITPRLEHLAC-- 451

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                M+D L   G+V+EA    +DM   S+ P+E  + +++ AC
Sbjct: 452 -----MVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGAC 488


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 197/613 (32%), Positives = 322/613 (52%), Gaps = 15/613 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRR 187
            + A  K+G V +A  VFD MP R+   +NA+I G  + G     + +F  M +   V  
Sbjct: 94  LVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAV 153

Query: 188 DNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFS----CLVSVVNALITMYFNCGNVVDA 242
           D +++  V+  C A G +  GR++  +V     S      V V  AL+ M+  CG + +A
Sbjct: 154 DGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEA 213

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
             VFE  +  V D  ++  M+ G    G   E +  F  M         L   +V+SAC 
Sbjct: 214 RNVFESMQ--VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACG 271

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                +VG  +H  A+KSG      VSNA + MY  CG ++ A  +F     KD+VSW++
Sbjct: 272 RAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSS 331

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
           +I  Y+Q  +   ++  + EM S+GI P+  T  S+L     ++++   + IH F   +G
Sbjct: 332 LIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHG 391

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  +  V +ALI  Y+K   I+ A  IF     +++  WN+++ G+ +NG+         
Sbjct: 392 LERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALR 451

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            L    L+PD  T+   L  C +   L  GK++H YV+K  + S  S+ NA++ +Y KCG
Sbjct: 452 LLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCG 511

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            L+ +  VF +M E++T+++N LIS++ +H    +A+S F  M+  G I PD+ TF A+L
Sbjct: 512 FLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDG-IAPDKVTFVALL 570

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           S CSHAGL+D G  ++ SM++DY   P ++H SC++DL  R G LDEA   +++   +  
Sbjct: 571 SCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPE 630

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
            D    L +AC  H  + +  ++   + E+  + P  ++LLSNIYA AG+W +   IR +
Sbjct: 631 IDVLGGLLAACRVHNRMDIAELVGKRIFEQNPNDPGYHILLSNIYADAGMWSDVTRIRTM 690

Query: 717 LKRTGVIKQPGCS 729
           ++   + K+ G S
Sbjct: 691 IQERNLKKETGNS 703



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 245/539 (45%), Gaps = 39/539 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L  +G + +AL +F  + +   +  D ++    + ACA L            A+
Sbjct: 123 NAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALG-----------AV 171

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G K +  V   I S   NAR              P+V+     +    K G +D A  
Sbjct: 172 AQGRKVWEMVETDIAS--GNAR--------------PNVFVQCALVDMFAKCGCLDEARN 215

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF+ M  RDL  + AMI G   +G     + LF  M       D+   A+V+S C  AG 
Sbjct: 216 VFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGE 275

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G  LH    KSG S  + V NAL+ MY  CG V  A  +F        D +S++ ++
Sbjct: 276 LQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSK--DVVSWSSLI 333

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGF 319
            G +  G    ++  F +M+   + P+  T  S++  CL      R G ++H  +++ G 
Sbjct: 334 VGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILP-CLSVLKLIRSGKEIHCFSIRHGL 392

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E    V +A I +YS  G I  A  IF    +KD+  WN+M++ YA      SA  A   
Sbjct: 393 ERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRL 452

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +Q VG++PD  T  S+L       M+   + +HA+V    I +   V+NAL+  Y K   
Sbjct: 453 LQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGF 512

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A ++F  M+ RN +T+N LI+ F  +    Q L  F  +    + PD+ T    LS 
Sbjct: 513 LEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSC 572

Query: 497 CARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           C+    +  G  ++  +L + N+  +    + ++ LY++CG LD +    + M E+  I
Sbjct: 573 CSHAGLIDKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEI 631



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 213/451 (47%), Gaps = 15/451 (3%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R+LH+ V   G      +V  L+  Y   G+V  A +VF+       +  ++N ++ GL 
Sbjct: 73  RRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRR--NSFAWNAVIKGLV 130

Query: 268 SVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLC-------PRVGYQVHAQAMKSGF 319
             GR  EAL  F  M+   S+     T+  V+ AC          +V   V         
Sbjct: 131 DAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIASGNA 190

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V  A + M++ CG +DEA  +F  +Q +D+ +W  MI            +  +  
Sbjct: 191 RPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDLFNH 250

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+S G   D     +++++   +G +++   +H     +G   +I VSNAL+  Y K   
Sbjct: 251 MRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCKCGC 310

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A  +F + + +++++W++LI G+  NG     +  F E++   + P+  TL+  L  
Sbjct: 311 VEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASILPC 370

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + +  +R GK+IH + +++ L     + +A+I LY+K G +  +  +F + ++KD   W
Sbjct: 371 LSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIW 430

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N++++ YA +G    A    + +Q VG +KPD  T  +VL  C+   ++  G  +  + V
Sbjct: 431 NSMVAGYAVNGYSDSAFCALRLLQKVG-LKPDHVTVVSVLPLCNQHHMLIQGKELH-AYV 488

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
             Y         + +LD+  + G+L+ A+ V
Sbjct: 489 IKYCINSVCSVNNALLDMYCKCGFLEVAKEV 519



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 7/187 (3%)

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           +L + L SC      +  +++H  VL         L   ++  YAK GD+  +LRVF+ M
Sbjct: 58  SLLLRLQSC---PDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGM 114

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             +++ +WNA+I      G   EA+  F  M + G +  D  T+  V+ AC+  G V  G
Sbjct: 115 PRRNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQG 174

Query: 609 TRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            ++++ +  D     A  ++     ++D+  + G LDEA  V  S  ++  +  W A+  
Sbjct: 175 RKVWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLA-AWTAMIG 233

Query: 666 ACAAHGN 672
                GN
Sbjct: 234 GTVHSGN 240


>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
 gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 178/532 (33%), Positives = 283/532 (53%), Gaps = 10/532 (1%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G ++H    + G    V+V   ++TMY  CG V  A ++F+E KG   D ++++ ++   
Sbjct: 7   GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGR--DLVAWSAIIAAF 64

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
              G  +EAL  FR M    L+ +++  +S + AC      ++G  +H  A+K+  +   
Sbjct: 65  VQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDI 124

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SV  A ++MY+ CG    A  +F R+  KD+V+WN MI+ YAQ      A+  + ++Q  
Sbjct: 125 SVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLS 184

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            + P+  T   LL +   +  ++    IH  +   G  +   V  ALI  YAK   +  A
Sbjct: 185 ELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGA 244

Query: 441 YQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
             +FH    R + ++WN +I G++ +G  +     F ++ +  ++P+  T+   L + A 
Sbjct: 245 EFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAH 304

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           +S+LR G  +H YV++    SK  +GN +I +YAKCG LD S ++F+ M  KDT+SWN +
Sbjct: 305 LSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVM 364

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++ YA HG G  A+  F  MQD   I+ D  +F  VLSAC HAGL+ +G +IFDSM   +
Sbjct: 365 LAGYAVHGRGSCAIELFSRMQD-SEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQH 423

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
              P  +H +CM DLLGRAG  +E   +I S  ++  +  W AL  A   H N++L    
Sbjct: 424 QLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFA 483

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              L + E    + Y  LSN YA +G W +  N R  + +TG+ K PG SW+
Sbjct: 484 LHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 229/507 (45%), Gaps = 43/507 (8%)

Query: 70  LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF 129
           +R    G ++H +A + G+ +   VA  I+++Y    ++ + K++F EI+  D+ +W+  
Sbjct: 1   MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWS-- 58

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
                                        A+I    ++GY    + LFR M    ++ + 
Sbjct: 59  -----------------------------AIIAAFVQSGYPQEALSLFRSMQNEGLQANK 89

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
               S L  C +   L+ G+ +H    K+     +SV  AL++MY  CG    A  +F  
Sbjct: 90  VILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNR 149

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
                 D +++N M++G A +G    AL  F  + ++ L P+  T V ++ A        
Sbjct: 150 MP--CKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLD 207

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTY 364
            G  +H + +K GFE+   V  A I MY+ CG +  A  +F R    KD VSWN MI+ Y
Sbjct: 208 QGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGY 267

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNI 421
                   A  A+ +M+   I+P+  T  ++L +   +  +     +HA+V   G  +  
Sbjct: 268 MHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKT 327

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V N LI  YAK   +  + +IFH M  ++ ++WN ++ G+ ++G     ++ FS +  S
Sbjct: 328 PVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDS 387

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDC 540
           E+R D ++    LS+C     +  G++I   + K + L   +     M  L  + G  + 
Sbjct: 388 EIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNE 447

Query: 541 SLRVF-NMMIEKDTISWNALISAYAQH 566
            L +  +M +E D   W AL+ A   H
Sbjct: 448 VLDLIKSMPMEPDAGVWGALLGASTMH 474



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 188/404 (46%), Gaps = 55/404 (13%)

Query: 12  GNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G  +T+K+L        L+  +  +A   +SG+ Q+AL LF  + +   L+ +   L ++
Sbjct: 37  GEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNE-GLQANKVILLSS 95

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA + +   G  +H  A++A +     V   ++S+Y                     
Sbjct: 96  LPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMY--------------------- 134

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG--IGLFREMH 181
                      K G    A  +F++MP +D+  +NAMI     NGY  IG         H
Sbjct: 135 ----------AKCGFFALALTLFNRMPCKDVVTWNAMI-----NGYAQIGEPFPALEMFH 179

Query: 182 KLDVRRDNYSFASVLSVCDA----GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           KL +   N +  +++ +  A      L+ G  +H  + K GF     V  ALI MY  CG
Sbjct: 180 KLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCG 239

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A  +F    G   D +S+NVM+ G    G   +A   F  M + +++P+ +T V+V
Sbjct: 240 SLSGAEFLFHRT-GCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTV 298

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + A       R G  +HA  ++ GF++ T V N  I MY+ CG +D +  IF  ++ KD 
Sbjct: 299 LPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDT 358

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           VSWN M++ YA    G  AI  +  MQ   IR D F+F ++L++
Sbjct: 359 VSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSA 402



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 33/193 (17%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +A    SGH  DA   F Q+     ++P+I ++ T L A A+L     G  LHAY +
Sbjct: 261 NVMIAGYMHSGHAIDAFSAFCQM-KLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVI 319

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G ++   V N ++ +Y                                K G +D++ +
Sbjct: 320 RMGFQSKTPVGNCLIDMY-------------------------------AKCGWLDHSEK 348

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F +M ++D   +N M+ G   +G     I LF  M   ++R D++SF +VLS C  AGL
Sbjct: 349 IFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGL 408

Query: 204 LEFGRQLHSLVTK 216
           +  GR++   ++K
Sbjct: 409 IGEGRKIFDSMSK 421



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 34/263 (12%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL +F ++  S +L P+  ++   L A A L +   G+ +H   ++ G ++  HV   ++
Sbjct: 174 ALEMFHKLQLS-ELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALI 232

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y     L   + +F               + C K                 D   +N 
Sbjct: 233 DMYAKCGSLSGAEFLFHR-------------TGCRK-----------------DEVSWNV 262

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSG 218
           MI G   +G+       F +M   +++ +  +  +VL +V     L  G  LH+ V + G
Sbjct: 263 MIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMG 322

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F     V N LI MY  CG +  + K+F E K    D +S+NVM+ G A  GR   A+  
Sbjct: 323 FQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNK--DTVSWNVMLAGYAVHGRGSCAIEL 380

Query: 279 FRDMLVASLRPSELTFVSVMSAC 301
           F  M  + +R    +F++V+SAC
Sbjct: 381 FSRMQDSEIRLDSFSFINVLSAC 403



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 66/101 (65%), Gaps = 1/101 (0%)

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +L  G +IH +  +  + S +++   ++T+YA+CG++D + ++F  +  +D ++W+A+
Sbjct: 1   MRALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAI 60

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           I+A+ Q G  +EA+S F++MQ+ G ++ ++    + L AC+
Sbjct: 61  IAAFVQSGYPQEALSLFRSMQNEG-LQANKVILLSSLPACA 100


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 297/549 (54%), Gaps = 16/549 (2%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG-NVVDACKVFEEA 249
           +AS+L  C   L    G Q+H+ V KSG      V N+L+T+YF  G +  +  KVF+  
Sbjct: 62  YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
             +V D IS+  M+ G   VG+   +L  F  ML   + P+  T  +V+ AC      ++
Sbjct: 122 --FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKL 179

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G   H   +  GF++   +++A I M+     +D+A  +F  L E D + W ++IS   +
Sbjct: 180 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTR 239

Query: 367 RNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
            +    A+  +  MQ   G+ PD FTFG++L + G +  ++    +HA V   G   N+ 
Sbjct: 240 NDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV 299

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V ++L+  Y K   + ++ +IF  M  +N ++W+ L+ G+  NG     +Q F ++    
Sbjct: 300 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME--- 356

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
            + D Y     L +CA ++++R GK++H   ++      + + +A++ LYAKCG ++ + 
Sbjct: 357 -KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 415

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+ M  ++ I+WN++I  +AQ+G G+EA+  F  M   G IKPD  +F  +L ACSH 
Sbjct: 416 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEG-IKPDYISFIGILFACSHR 474

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD+G   F SM  DYG     +H SCM+DLLGRAG L+EAE +I +   +  S  W A
Sbjct: 475 GLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAA 534

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L  AC    N  +   IA  ++E E D    YVLL+N+Y A G W +A  IR L+K  GV
Sbjct: 535 LLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGV 594

Query: 723 IKQPGCSWI 731
            K PG SWI
Sbjct: 595 NKMPGKSWI 603



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 256/563 (45%), Gaps = 59/563 (10%)

Query: 20  LLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANL 70
           LL  LN+S        +  L +SG    AL L   I       KP +Y+  + L  C  +
Sbjct: 15  LLTPLNLSDNTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYA--SLLQTCTKV 72

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTF 129
                G Q+HA+ +++GL+    V N++L+LY K   D    ++VF  +   DV SWT+ 
Sbjct: 73  LAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSM 132

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           +S   ++G    + E+F KM          +  G   N                      
Sbjct: 133 ISGYVRVGKPMNSLELFWKM----------LAYGVEPNA--------------------- 161

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           ++ ++V+  C + G L+ GR  H +V   GF     + +ALI M+     + DA ++F+E
Sbjct: 162 FTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLC---P 304
                 D I +  ++  L      +EAL  F  M     + P   TF +V++AC      
Sbjct: 222 L--LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRL 279

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           + G +VHA+ + +GF     V ++ + MY  CG + E+  IF R+  K+ VSW+ ++  Y
Sbjct: 280 KQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGY 339

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
            Q    +S I  + +M+ V    D + FG++L +   +  V     +H      G   ++
Sbjct: 340 CQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV 395

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V +AL+  YAK   I+ A  IF  M  RN+ITWN++I GF  NG   + L+ F++++  
Sbjct: 396 IVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKE 455

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDL-D 539
            ++PD  +    L +C+    +  G++    + K+  I   +   + M+ L  + G L +
Sbjct: 456 GIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEE 515

Query: 540 CSLRVFNMMIEKDTISWNALISA 562
             + +       D+  W AL+ A
Sbjct: 516 AEILIETSDFRDDSSLWAALLGA 538


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 270/525 (51%), Gaps = 36/525 (6%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +HS +      C  S+   L+  Y +  +V  A KVF+E      + I  NVM+    
Sbjct: 59  RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSYV 116

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTS 324
           + G   E +  F  M   ++RP   TF  V+ AC C     +G ++H  A K G  +   
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  ++MY  CG + EA ++   +  +D+VSWN+++  YAQ      A+    EM+SV 
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           I  D  T  SLL +                   ++N    N +   Y K+        +F
Sbjct: 237 ISHDAGTMASLLPA-------------------VSNTTTENVM---YVKD--------MF 266

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +++++WN +I  ++ N  PV+ ++ +S +      PD  +++  L +C   S+L 
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK+IHGY+ +  LI  + L NA+I +YAKCG L+ +  VF  M  +D +SW A+ISAY 
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
             G G +AV+ F  +QD G + PD   F   L+ACSHAGL+++G   F  M + Y   P 
Sbjct: 387 FSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +HL+CM+DLLGRAG + EA R I    ++     W AL  AC  H +  +G + A  L 
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +   ++   YVLLSNIYA AG WEE  NIR ++K  G+ K PG S
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 243/526 (46%), Gaps = 43/526 (8%)

Query: 98  ILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +L  Y + R L +V  R+  E    +       + A   +  V  A +VFD++P+R++ +
Sbjct: 48  VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
            N MI     NG+   G+ +F  M   +VR D+Y+F  VL  C  +G +  GR++H   T
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G S  + V N L++MY  CG + +A  V +E      D +S+N ++ G A   R ++A
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDA 225

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           L   R+M    +     T  S++ A                    + T+  N    MY  
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAV-------------------SNTTTEN---VMYVK 263

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
                    +F ++ +K +VSWN MI  Y +  +   A+  Y  M++ G  PD  +  S+
Sbjct: 264 --------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315

Query: 396 LASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L + G    + + + IH ++    +I N+ + NALI  YAK   +++A  +F NM  R++
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++W  +I+ +  +G     +  FS+L  S L PD       L++C+    L  G+     
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435

Query: 513 VLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGK 570
           +  +  +  ++     M+ L  + G +  + R + +M +E +   W AL+ A   H +  
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
             +    A   + ++ P+Q+ +  +LS   + AG  ++ T I + M
Sbjct: 496 IGL---LAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 176/361 (48%), Gaps = 18/361 (4%)

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           S+ L  LE+     +   F  G +L +   I  +  +H+ + +  +  N  +   L+ AY
Sbjct: 25  SSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAY 84

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A  + +  A ++F  +  RN+I  N +I  ++ NGF  +G++ F  +    +RPD YT  
Sbjct: 85  ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L +C+   ++  G++IHG   K  L S + +GN ++++Y KCG L  +  V + M  +
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D +SWN+L+  YAQ+    +A+   + M+ V +I  D  T  ++L A S+       T  
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESV-KISHDAGTMASLLPAVSN-------TTT 256

Query: 612 FDSM-VNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALF 664
            + M V D  F   +  L   + M+ +  +     EA  +   + +   +  + +  ++ 
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGV 722
            AC     L LG+ I G  +ER++  P++ +   L ++YA  G  E+A ++ E +K   V
Sbjct: 317 PACGDTSALSLGKKIHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375

Query: 723 I 723
           +
Sbjct: 376 V 376



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 77/416 (18%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N+ + +   +G Y + + +F  +   + ++PD Y+    L AC+       G ++H  A
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF-------------L 130
            + GL +   V N ++S+Y     L   + V  E+   DV SW +              L
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226

Query: 131 SACTKMGHVD------------------------YACEVFDKMPDRDLPVYNAMITGCTE 166
             C +M  V                         Y  ++F KM  + L  +N MI    +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSV 225
           N      + L+  M       D  S  SVL  C D   L  G+++H  + +      + +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
            NALI MY  CG +  A  VFE  K    D +S+  M+      GR  +A+  F  +  +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR--DVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACM 344
            L P  + FV+ ++AC         HA  ++ G   +  +++     Y    +++  ACM
Sbjct: 405 GLVPDSIAFVTTLAAC--------SHAGLLEEGRSCFKLMTD----HYKITPRLEHLACM 452

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFGSLLAS 398
           +       D+              LGR+  +  AY  +Q + + P+E  +G+LL +
Sbjct: 453 V-------DL--------------LGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 68/285 (23%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L+  N+ +    ++    +A+ L+ ++ +    +PD  S+++ L AC +    + G 
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGK 329

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H Y  R  L     + N ++ +Y     L   + VF  +++ DV SWT  +SA     
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA----- 384

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                              Y     GC         + LF ++    +  D+ +F + L+
Sbjct: 385 -------------------YGFSGRGCD-------AVALFSKLQDSGLVPDSIAFVTTLA 418

Query: 198 VCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C  AGLLE GR    L+T                         D  K+    +   C  
Sbjct: 419 ACSHAGLLEEGRSCFKLMT-------------------------DHYKITPRLEHLAC-- 451

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                M+D L   G+V+EA    +DM   S+ P+E  + +++ AC
Sbjct: 452 -----MVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGAC 488


>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
 gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
 gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 776

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 180/610 (29%), Positives = 325/610 (53%), Gaps = 21/610 (3%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           +A  + D+MP R+   YN +I   +  G   + +  F          D +++A+ L+ C 
Sbjct: 54  HAARLLDEMPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACS 113

Query: 201 AGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             L +  G+ +H++V   G    + + N++ +MY  CG + +A +VF+ A+    D +S+
Sbjct: 114 RALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEER--DDVSW 171

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP------------RVG 307
           N ++ G    G  EE L  F  M    L  +     S++  C               R+ 
Sbjct: 172 NALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIA 231

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VH   +K+G +A   +++A I MY+  G +  A  +F  + + +++  N MI+ + + 
Sbjct: 232 EAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCRE 291

Query: 368 ---NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNI 421
              ++ R A+  Y E+QS G++P EF+F S+L +   +G     + IH  V  +    ++
Sbjct: 292 EAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            + +ALI  Y+ +  ++  Y+ F ++  ++++ W ++I+G + N    + L+ F E +  
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRC 411

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            LRPD + +S  +++CA ++  R G+QI    +K+      ++GN+ I + A+ GD+D +
Sbjct: 412 GLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAA 471

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            R F  M  +D +SW+A+IS++A HG  ++A+  F  M D     P++ TF ++L+ACSH
Sbjct: 472 TRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSH 531

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GLVD+G R +  M ++YG  P   H +C++DLLGRAG L +AE  I        +  W 
Sbjct: 532 GGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWR 591

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           +L ++C  HG++  G+++A  +++ E    + YV+L N+Y  AG    A+  R+L+K  G
Sbjct: 592 SLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILYNMYLDAGELSSASKTRDLMKERG 651

Query: 722 VIKQPGCSWI 731
           V K+PG SWI
Sbjct: 652 VKKEPGLSWI 661



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 132/568 (23%), Positives = 245/568 (43%), Gaps = 60/568 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   SR+G    +L  F +  +  ++  D ++ +  LAAC+   +   G  +HA  +
Sbjct: 71  NLVIVAYSRAGLPALSLATFARARAWARV-VDRFTYAAALAACSRALDVRTGKAVHAMVV 129

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL     ++N++ S+Y    ++   +RVF   +  D  SW   LS   + G  +   E
Sbjct: 130 LGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRAGAREETLE 189

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----- 199
           VF  M              C        G+G            ++++  S++  C     
Sbjct: 190 VFSLM--------------CRH------GLGW-----------NSFALGSIIKCCASSSS 218

Query: 200 -----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
                D G       +H  V K+G    + + +A+I MY   G + +A  +F+       
Sbjct: 219 YAAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDP-- 276

Query: 255 DHISYNVMMDGL-----ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGY 308
           + I  N M+ G      A V R  EAL  + ++    ++PSE +F S++ AC L    G+
Sbjct: 277 NVIVLNAMIAGFCREEAADVAR--EALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGF 334

Query: 309 --QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
             Q+H Q +K  F+    + +A I +YS  G +++    F  L ++D+V W ++IS   Q
Sbjct: 335 GKQIHGQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQ 394

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
             L   A+  + E    G+RPD F   S++   AS       E I      +G      +
Sbjct: 395 NELFEEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAM 454

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N+ I   A++  +  A + F  M  R++++W+ +I+    +G     L  F+E+L +++
Sbjct: 455 GNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKV 514

Query: 484 -RPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DC 540
             P+E T    L++C+    +  G + +G +     L   +     ++ L  + G L D 
Sbjct: 515 APPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADA 574

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGE 568
              + +     D + W +L+++   HG+
Sbjct: 575 EAFIRDSAFHDDAVVWRSLLASCRIHGD 602


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  318 bits (816), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 191/559 (34%), Positives = 301/559 (53%), Gaps = 18/559 (3%)

Query: 185 VRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V+ +  +F +VL SV D   L  G+ +HS V +S  S  V V  AL+  Y  CG++ DA 
Sbjct: 6   VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65

Query: 244 KVFEEAKGYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
           KVF+   G  C  + ++N M+   +   R  EA   F+ M     R   +TF+S++ AC+
Sbjct: 66  KVFD---GMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACV 122

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P   + G  V     ++ FE    V  A ITMY+ C   + A  +F R+++K++++W+ 
Sbjct: 123 NPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSA 182

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF-----IEMVEMIHAFVFI 414
           +I+ +A       A+  +  MQ  GI P+  TF SLL  +GF     +E +  IH  +  
Sbjct: 183 IITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLL--NGFTTPSGLEELSRIHLLITE 240

Query: 415 NGIITNIQVSNALISAYAKNE--RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           +G+     +SNAL++ Y + E   +  A  I   M  + I  WN LING+ L+G   + L
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + +  L +  +  D+ T    L++C   +SL  GK IH   ++  L S + + NA+  +Y
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMY 360

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           +KCG ++ + R+F+ M  +  +SWN ++ AYAQHGE +E +   + M+  G +K +  TF
Sbjct: 361 SKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG-VKLNGITF 419

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            +VLS+CSHAGL+ +G + F S+ +D G     +H  C++DLLGRAG L EAE+ I+   
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
            +     W +L  AC  H +L  G++ A  LLE +    S  V+LSNIY+  G W+ AA 
Sbjct: 480 SEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSERGDWKNAAK 539

Query: 713 IRELLKRTGVIKQPGCSWI 731
           +R  +    V K PG S I
Sbjct: 540 LRRAMASRRVKKVPGISSI 558



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 222/458 (48%), Gaps = 13/458 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           DV+  T  ++  TK G +  A +VFD MP R +  +N+MI+  + +        +F+ M 
Sbjct: 44  DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
               R D  +F S+L  C +   L+ G+ +   ++++ F   + V  ALITMY  C +  
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +A +VF   K    + I+++ ++   A  G   EAL  FR M    + P+ +TF+S+++ 
Sbjct: 164 NAAQVFGRMKQK--NLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNG 221

Query: 301 CLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC--GKIDEACMIFARLQEKDIV 355
              P       ++H    + G +  T++SNA + +Y  C  G++D A +I   + E+ I 
Sbjct: 222 FTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQIT 281

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV 412
           +WN +I+ Y      R A+  Y  +Q   I  D+ TF S+L    SS  +   +MIH+  
Sbjct: 282 AWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNA 341

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G+ +++ V NAL + Y+K   ++ A +IF +M  R+ ++WN ++  +  +G   + L
Sbjct: 342 VECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVL 401

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITL 531
           +   ++    ++ +  T    LSSC+    +  G Q  H       +  K      ++ L
Sbjct: 402 KLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDL 461

Query: 532 YAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGE 568
             + G L  + + +  M  E + ++W +L+ A   H +
Sbjct: 462 LGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKD 499



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 210/476 (44%), Gaps = 52/476 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           RSG   +A  +F ++    + + D  +  + L AC N  N   G  +         +   
Sbjct: 91  RSG---EAFFIFQRMQHEGE-RCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDL 146

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   ++++Y   R   +  +VF  ++  ++ +W+  ++A    GH              
Sbjct: 147 FVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGH-------------- 192

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS--VCDAGLLEFGRQL 210
                      C E       +  FR M +  +  +  +F S+L+     +GL E  R +
Sbjct: 193 -----------CGE------ALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSR-I 234

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNC--GNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           H L+T+ G     ++ NAL+ +Y  C  G +  A  + +E         ++NV+++G   
Sbjct: 235 HLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQI--TAWNVLINGYTL 292

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
            GR  EAL  ++ + + ++   ++TF+SV++AC        G  +H+ A++ G ++   V
Sbjct: 293 HGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIV 352

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA   MYS CG ++ A  IF  +  +  VSWN M+  YAQ       +    +M+  G+
Sbjct: 353 KNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV 412

Query: 386 RPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + +  TF S+L+S   +G I E  +  H+     GI    +    L+    +  ++++A 
Sbjct: 413 KLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAE 472

Query: 442 QIFHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +    M S   I+TW +L+    ++    +G     +LL  EL P   + SV LS+
Sbjct: 473 KYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLL--ELDPGNSSASVVLSN 526



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 14/251 (5%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L+  ++ +  T    L+S     +LR GK IH  V ++     + +  A++  Y KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  + +VF+ M  +   +WN++ISAY+      EA   F+ MQ  G  + D+ TF ++L 
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGE-RCDRVTFLSILD 119

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC +   +  G  + +S +++  F       + ++ +  R    + A +V      Q   
Sbjct: 120 ACVNPENLQHGKHVRES-ISETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNL 177

Query: 658 DNWWALFSACAAHGN----LRLGRII--AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
             W A+ +A A HG+    LR  R++   G+L  R       ++ L N +      EE +
Sbjct: 178 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNR-----VTFISLLNGFTTPSGLEELS 232

Query: 712 NIRELLKRTGV 722
            I  L+   G+
Sbjct: 233 RIHLLITEHGL 243



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 34/222 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   +  G  ++AL  + ++     +  D  +  + L AC +  + A G  +H+ A+
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLE-AIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV 342

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL +   V N + ++Y     + + +R+F                             
Sbjct: 343 ECGLDSDVIVKNALTNMYSKCGSMENARRIF----------------------------- 373

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
             D MP R    +N M+    ++G  +  + L R+M +  V+ +  +F SVLS C  AGL
Sbjct: 374 --DSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGL 431

Query: 204 LEFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           +  G Q  HSL    G          L+ +    G + +A K
Sbjct: 432 IAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEK 473


>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
          Length = 830

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 201/709 (28%), Positives = 362/709 (51%), Gaps = 78/709 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   +++ PD + +     AC  L+ + FG  +H Y ++AGL+   
Sbjct: 150 RIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCV 208

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD++P+R
Sbjct: 209 FVASSLADMY-------------------------------GKCGVLDDARKVFDEIPER 237

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           ++  +NA++ G  +NG  +  I L  +M K  V     + ++ LS   + G +  G+Q H
Sbjct: 238 NVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSH 297

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  +L+  Y   G +  A  +F+  + +  D +++N+++ G    G 
Sbjct: 298 AIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFD--RMFDKDVVTWNLLISGYVQQGL 355

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
           VE+A+   + M + +L+   +T  ++MSA    +    G +V    ++   E+   +++ 
Sbjct: 356 VEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASI 415

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG I +A  +F    EKD++ WNT+++ YA+  L   A+  + EMQ   + P+
Sbjct: 416 TMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPN 475

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM- 447
             T+                                N +I +  +N  + +A ++F  M 
Sbjct: 476 VITW--------------------------------NLIILSLLRNGEVNEAKEMFLQMQ 503

Query: 448 ----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
               SP N+I+W T++NG + NG   + +    ++  S LRP+ ++++VALS+ A ++SL
Sbjct: 504 SSGISP-NLISWTTMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASL 562

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N    S +S+  +++ +YAKCGD++ + RVF   +  +   +NA+ISA
Sbjct: 563 HFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISA 622

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA +G  KEA++ +++++D+G  KPD  TFT++LSAC+H G ++    IF  MV+ +G  
Sbjct: 623 YALYGNVKEAITLYRSLEDMGN-KPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVK 681

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H   M+DLL  AG  D A ++I     +  +    +L ++C       L    +  
Sbjct: 682 PCLEHYGLMVDLLASAGETDRALKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRH 741

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE E +    YV +SN YA  G W+E   +R+++K  G+ K PGCSWI
Sbjct: 742 LLESEPENSGNYVTISNAYAVEGSWDEVVKMRDMMKAKGLTKNPGCSWI 790



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 157/603 (26%), Positives = 281/603 (46%), Gaps = 55/603 (9%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL----PVYNAMITGCTENGYEDIGIG 175
           NP   S+   +S+  K G +  A  +  KM  R+L     +Y  ++ GC    YE     
Sbjct: 32  NPSSTSYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCV---YE----- 83

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSG--FSCLVSVVNALITMY 233
                      RD               L  G+Q+H+ + K+G  ++    +   L+  Y
Sbjct: 84  -----------RD---------------LCTGKQIHARILKNGDFYAGNEYIETKLVIFY 117

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C  +  A  +F + +  V +  S+  ++     +G  E AL+ F +ML   + P    
Sbjct: 118 AKCDALEIAQVLFSKLR--VRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFV 175

Query: 294 FVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
             +V  AC      R G  VH   +K+G E    V+++   MY  CG +D+A  +F  + 
Sbjct: 176 VPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIP 235

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
           E+++V+WN ++  Y Q  +   AI    +M+  G+ P   T  + L++S   G +   + 
Sbjct: 236 ERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQ 295

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
            HA   +NG+  +  +  +L++ Y K   I+ A  IF  M  ++++TWN LI+G++  G 
Sbjct: 296 SHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGL 355

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               +     + +  L+ D  TLS  +S+ AR  +L+ GK++  Y ++++L S + L + 
Sbjct: 356 VEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASI 415

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            + +YAKCG +  + +VF+  +EKD I WN L++AYA+ G   EA+  F  MQ +  + P
Sbjct: 416 TMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQ-LESVPP 474

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           +  T+  ++ +    G V++   +F  M +  G  P     + M++ + + G  +EA   
Sbjct: 475 NVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAILF 533

Query: 648 INSQHIQARSDNWWALFSACAAHGN---LRLGRIIAGLLLEREQDKPSVYVLLS--NIYA 702
           +          N +++  A +A  N   L  GR I G ++   Q   SV +  S  ++YA
Sbjct: 534 LRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYA 593

Query: 703 AAG 705
             G
Sbjct: 594 KCG 596



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+++  Q+     LK D  +LST ++A A  +N  FG ++  Y +
Sbjct: 344 NLLISGYVQQGLVEDAIYM-CQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCI 402

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R  L++   +A+  + +Y     +V  K+VF      D+  W T L+A            
Sbjct: 403 RHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 463 LFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISPNLISWTTMMNGMV 522

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M    +R + +S    LS   +   L FGR +H  + ++   S  V
Sbjct: 523 QNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSV 582

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A +VF        +   YN M+   A  G V+EA+  +R + 
Sbjct: 583 SIETSLVDMYAKCGDINKAERVF--GSKLYSELPLYNAMISAYALYGNVKEAITLYRSLE 640

Query: 284 VASLRPSELTFVSVMSAC 301
               +P  +TF S++SAC
Sbjct: 641 DMGNKPDNITFTSLLSAC 658


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  318 bits (815), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 301/533 (56%), Gaps = 15/533 (2%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  LH+   K+G    + V N +I +Y  CGNV+ A ++F+E      + +S++ ++ G 
Sbjct: 22  GLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDR--NLVSWSAIISGY 79

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
              G+   AL  F  M +    P+E  F SV+SAC        G QVHAQ++K G  + +
Sbjct: 80  DQTGQPLLALNLFSQMRIV---PNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVS 136

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VSNA I+MY  CG   +A ++   + E + VS+N +I+ + +       I A+  M+  
Sbjct: 137 FVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQK 196

Query: 384 GIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           G  PD FTF  LL    +   F   +++    + +N +  +  + N +I+ Y+K   I++
Sbjct: 197 GFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLN-LEDSAFIGNVIITMYSKFNLIEE 255

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCA 498
           A ++F  +  +++I+WNTL+          + L+ F ++L +  ++PD++T +  L++CA
Sbjct: 256 AEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACA 315

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            ++S+RHGKQIHG++++      + + NA++ +YAKCG +  S  VF    +++ +SWN 
Sbjct: 316 GLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNT 375

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I+A+  HG G  A+  F+ M+ VG I PD  TF  +L+AC+HAGLV++G   F+SM   
Sbjct: 376 IIAAFGNHGLGARALEHFEKMKTVG-IHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEA 434

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           YG  P  +H SC++DLLGRAG L EAE  +             +L SAC  HG++ +G  
Sbjct: 435 YGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEH 494

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +A  LL+ +    S YVLLSN+YA+  +W   A   ++LK +G+ K+PG S I
Sbjct: 495 LATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLI 547



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 243/524 (46%), Gaps = 54/524 (10%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           ++ + L  CA ++    G  LHA AL+ G+ +   V+N +++LY    +++  +R+F E+
Sbjct: 5   AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
            + ++ SW+                               A+I+G  + G   + + LF 
Sbjct: 65  SDRNLVSWS-------------------------------AIISGYDQTGQPLLALNLFS 93

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M    +  + Y FASV+S C +   L  G Q+H+   K G   +  V NALI+MY  CG
Sbjct: 94  QMR---IVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCG 150

Query: 238 NVVDAC---KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
              DA     V  E        +SYN ++ G     + E+ +  F+ M      P   TF
Sbjct: 151 LCTDALLVHNVMSEPNA-----VSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTF 205

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
             ++  C        G Q+H Q +K   E    + N  ITMYS    I+EA  +F  ++E
Sbjct: 206 SGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKE 265

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIEMV---EM 407
           KD++SWNT+++          A+  + +M  V  ++PD+FTF  +LA+   +  +   + 
Sbjct: 266 KDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQ 325

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH  +       ++ VSNAL++ YAK   IK +Y +F   S RN+++WNT+I  F  +G 
Sbjct: 326 IHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGL 385

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLG 525
             + L+HF ++    + PD  T    L++C     +  G Q++   ++    +   +   
Sbjct: 386 GARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEG-QVYFNSMEEAYGIFPNIEHF 444

Query: 526 NAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           + +I L  + G L +    +  +    D I   +L+SA   HG+
Sbjct: 445 SCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGD 488



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/482 (28%), Positives = 228/482 (47%), Gaps = 55/482 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   ++G    AL+LF Q+    ++ P+ Y  ++ ++ACA+L   + G Q+HA +L+ G
Sbjct: 76  ISGYDQTGQPLLALNLFSQM----RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLG 131

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             +   V+N ++S+Y                                K G    A  V +
Sbjct: 132 CVSVSFVSNALISMY-------------------------------MKCGLCTDALLVHN 160

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF- 206
            M + +   YNA+I G  EN   + GI  F+ M +     D ++F+ +L +C +   +F 
Sbjct: 161 VMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTS-YDDFW 219

Query: 207 -GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G QLH  + K        + N +ITMY     + +A KVF   K    D IS+N ++  
Sbjct: 220 RGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEK--DLISWNTLVTA 277

Query: 266 LASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEA 321
                  E AL  FRDML V  ++P + TF  V++AC      R G Q+H   +++    
Sbjct: 278 CCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQ 337

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              VSNA + MY+ CG I  +  +F R  ++++VSWNT+I+ +    LG  A+  + +M+
Sbjct: 338 DVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMK 397

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVSNALISAYAKNE 435
           +VGI PD  TF  LL +     +VE     V+ N      GI  NI+  + LI    +  
Sbjct: 398 TVGIHPDSVTFVGLLTACNHAGLVE--EGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAG 455

Query: 436 RIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           R+++A +    +    + I   +L++   L+G  V G    ++LL  +L+P   +  V L
Sbjct: 456 RLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLL--KLQPVTTSPYVLL 513

Query: 495 SS 496
           S+
Sbjct: 514 SN 515



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L  CA+I +  HG  +H   LK  ++S + + N +I LY+KCG++  + R+F+ M +++ 
Sbjct: 10  LHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNL 69

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           +SW+A+IS Y Q G+   A++ F  M    RI P++  F +V+SAC+    +  G ++
Sbjct: 70  VSWSAIISGYDQTGQPLLALNLFSQM----RIVPNEYVFASVISACASLTALSQGLQV 123


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 189/549 (34%), Positives = 297/549 (54%), Gaps = 16/549 (2%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG-NVVDACKVFEEA 249
           +AS+L  C   L    G Q+H+ V KSG      V N+L+T+YF  G +  +  KVF+  
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
             +V D IS+  M+ G   VG+   +L  F  ML   + P+  T  +V+ AC      ++
Sbjct: 181 --FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKL 238

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G   H   +  GF++   +++A I M+     +D+A  +F  L E D + W ++IS   +
Sbjct: 239 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTR 298

Query: 367 RNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
            +    A+  +  MQ   G+ PD FTFG++L + G +  ++    +HA V   G   N+ 
Sbjct: 299 NDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV 358

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V ++L+  Y K   + ++ +IF  M  +N ++W+ L+ G+  NG     +Q F ++    
Sbjct: 359 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME--- 415

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
            + D Y     L +CA ++++R GK++H   ++      + + +A++ LYAKCG ++ + 
Sbjct: 416 -KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQ 474

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+ M  ++ I+WN++I  +AQ+G G+EA+  F  M   G IKPD  +F  +L ACSH 
Sbjct: 475 TIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEG-IKPDYISFIGILFACSHR 533

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD+G   F SM  DYG     +H SCM+DLLGRAG L+EAE +I +   +  S  W A
Sbjct: 534 GLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAA 593

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L  AC    N  +   IA  ++E E D    YVLL+N+Y A G W +A  IR L+K  GV
Sbjct: 594 LLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGV 653

Query: 723 IKQPGCSWI 731
            K PG SWI
Sbjct: 654 NKMPGKSWI 662



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 250/547 (45%), Gaps = 51/547 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +  L +SG    AL L   I       KP +Y+  + L  C  +     G Q+HA+ +++
Sbjct: 90  ILQLCKSGELSGALQLLKSIDPGEISAKPVLYA--SLLQTCTKVLAFNHGLQIHAHVIKS 147

Query: 87  GLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           GL+    V N++L+LY K   D    ++VF  +   DV SWT+ +S   ++G    + E+
Sbjct: 148 GLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLEL 207

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
           F KM          +  G   N                      ++ ++V+  C + G L
Sbjct: 208 FWKM----------LAYGVEPNA---------------------FTLSAVIKACSELGDL 236

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           + GR  H +V   GF     + +ALI M+     + DA ++F+E      D I +  ++ 
Sbjct: 237 KLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL--LEPDAICWTSIIS 294

Query: 265 GLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFE 320
            L      +EAL  F  M     + P   TF +V++AC      + G +VHA+ + +GF 
Sbjct: 295 ALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFC 354

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V ++ + MY  CG + E+  IF R+  K+ VSW+ ++  Y Q    +S I  + +M
Sbjct: 355 GNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM 414

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           + V    D + FG++L +   +  V     +H      G   ++ V +AL+  YAK   I
Sbjct: 415 EKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCI 470

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           + A  IF  M  RN+ITWN++I GF  NG   + L+ F++++   ++PD  +    L +C
Sbjct: 471 EYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFAC 530

Query: 498 ARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTIS 555
           +    +  G++    + K+  I   +   + M+ L  + G L +  + +       D+  
Sbjct: 531 SHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSL 590

Query: 556 WNALISA 562
           W AL+ A
Sbjct: 591 WAALLGA 597


>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 736

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 223/684 (32%), Positives = 340/684 (49%), Gaps = 53/684 (7%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKN-ARDLVSVKRV-FSEIQNP-- 121
           A ++ R    G  LH +AL++G  ++  V+N++++ Y +  R L+    V F++I     
Sbjct: 23  AASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALR 82

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKM---PDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           DV SW + L+  ++  H   A   F  M   P+  LP  ++                   
Sbjct: 83  DVASWNSLLNPLSRH-HPVSALSHFRSMMSSPEAVLPSPHSFAA---------------- 125

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL---VSVVNALITMYFN 235
                  R  + S  +V               H+L  K   SC    V V  AL+ MY  
Sbjct: 126 -AFTAAARVPSASAGAVT--------------HALACKLPSSCGSNNVFVSTALLNMYCK 170

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTF 294
            G V DA +VF+       + +S+  M+ G A+    EEA   FR ML    L  +E   
Sbjct: 171 LGAVSDAKRVFDGMLHR--NAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVT 228

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+SA   P    +G Q+H   +K G   + SV N+ +TMY+    +D A  +F   +E
Sbjct: 229 TAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKE 288

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMI 408
           ++ ++W+ MI+ YAQ      A   +L+M S G  P EFTF G L A S  G + + +  
Sbjct: 289 RNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQT 348

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGF 467
           H  +   G  T + V +AL+  YAK   I  A   FH +    +++ W  +I G + NG 
Sbjct: 349 HCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGE 408

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L  +S +    + P   T++  L +CA +++L  GKQ+H  +LK       S+G A
Sbjct: 409 HEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTA 468

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           + T+Y+KCG+L+ S+ VF  M ++D ISWN++IS ++QHG G +A+  F+ M+  G   P
Sbjct: 469 LSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEG-TAP 527

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  +LSACSH GLVD G   F +M  DY  IP  DH +CM+D+L RAG L EA+  
Sbjct: 528 DHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDF 587

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I+S  I   +  W  +  AC +  +  +G      L+E   +  S Y+LLSNIYAA   W
Sbjct: 588 IDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKW 647

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
            +   +R L++  GV K  GCSW+
Sbjct: 648 NDVERVRHLMRLRGVSKDLGCSWV 671



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 181/373 (48%), Gaps = 36/373 (9%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++A  LF  +     L+ + +  +  L+A +       G QLH   L+ GL  +  V N+
Sbjct: 206 EEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENS 265

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++++Y  A  + +  RVF   +  +  +W+                              
Sbjct: 266 LVTMYAKAECMDAAMRVFGSSKERNSITWS------------------------------ 295

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTK 216
            AMITG  +NG  +    +F +MH        ++F  VL+ C D G L  G+Q H L+ K
Sbjct: 296 -AMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVK 354

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            GF   V V +AL+ MY  CG + DA   F +    V D + +  M+ G    G  EEAL
Sbjct: 355 LGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYD-VDDVVLWTAMITGHVQNGEHEEAL 413

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           + +  M    + PS LT  SV+ AC C     +G Q+HAQ +K  F    SV  A  TMY
Sbjct: 414 MLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMY 473

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           S CG ++++ ++F R+ ++D++SWN++IS ++Q   G  A+  + EM+  G  PD  TF 
Sbjct: 474 SKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFI 533

Query: 394 SLLASSGFIEMVE 406
           +LL++   + +V+
Sbjct: 534 NLLSACSHMGLVD 546



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +++AL L+ ++     + P   ++++ L ACA L     G QLHA  L+       
Sbjct: 405 QNGEHEEALMLYSRM-DKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGG 463

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM--- 149
            V   + ++Y    +L     VF  + + DV SW + +S  ++ G    A ++F++M   
Sbjct: 464 SVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLE 523

Query: 150 ---PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDAG 202
              PD     +  +++ C+  G  D G   FR M K   L    D+Y+    +LS   AG
Sbjct: 524 GTAPDH--ITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILS--RAG 579

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVV 226
            L+  +     +T    +CL  +V
Sbjct: 580 QLKEAKDFIDSITIDHGTCLWRIV 603


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 182/539 (33%), Positives = 293/539 (54%), Gaps = 28/539 (5%)

Query: 208 RQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVVDACKVF-----------EEAKGYVCD 255
           + +HS ++  GF       +  LI +Y   G++  A  +F           +    ++C 
Sbjct: 42  KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLC- 100

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
               N M+   A+ GR  EA+  +  M    +  +  T+  V+  C   L    G  VH 
Sbjct: 101 ----NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHG 156

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           Q +++GF +   V  A + MY+ CG+I +A  +F R+  +D+V W  MI+ Y Q      
Sbjct: 157 QVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLK 216

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALIS 429
           A++ + +MQ  G   DE T  S+ ++ G +    M   +H +  +NG I ++ V N+++ 
Sbjct: 217 ALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVG 276

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK   +++A  +F  M  RN I+WN++++G+  NG P   L  F+++  SE  P+  T
Sbjct: 277 MYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVT 336

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN--M 547
             + +S+C+ + S   G+++H +V+ + +    +L NA++ +Y KCGDLD ++ +FN   
Sbjct: 337 ALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCE 396

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + E+D  SWN LIS Y  HG GKEA+  F  MQ  G ++P+  TFT++LSACSHAGL+D+
Sbjct: 397 LGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEG-VEPNDITFTSILSACSHAGLIDE 455

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G + F  M       P   H +CM+D+LGRAG+L+EA R+I     +   + W AL  AC
Sbjct: 456 GRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLAC 514

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
             HGN  LG I A  L + E +    YVL+SNIYAA+  W+E   +R+ +K  G +K+P
Sbjct: 515 RIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRG-LKKP 572



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 165/359 (45%), Gaps = 22/359 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK----AYPHVANTILSLYKNARDLVS 110
           P+ +  +T L A AN   +     L+ Y  R G+      YP V     S        V 
Sbjct: 95  PNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVV 154

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
             +V       D++     +    K G +  A EVFD+M  RD+  + AMIT   +    
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERP 214

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR---QLHSLVTKSGFSCLVSVVN 227
              + LFR+M +     D  +  SV S    G L  GR    +H     +GF   VSV N
Sbjct: 215 LKALMLFRKMQEEGFLGDEITAISVASA--VGQLGDGRMAISVHGYAVLNGFIGDVSVGN 272

Query: 228 ALITMYFNCGNVVDACKVF---EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           +++ MY  CGNV  A  VF   EE  G     IS+N M+ G    GR  +AL  F  M  
Sbjct: 273 SIVGMYAKCGNVERARLVFDRMEERNG-----ISWNSMLSGYTQNGRPTDALSLFNQMQA 327

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           +   P+ +T + ++SAC       +G ++H   + S  +  T++ NA + MY  CG +D 
Sbjct: 328 SECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDT 387

Query: 342 ACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           A  +F    L E+D+ SWN +IS Y     G+ A+  +  MQ  G+ P++ TF S+L++
Sbjct: 388 AVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSA 446



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 185/440 (42%), Gaps = 86/440 (19%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL LF ++     L  +I ++S   +A   L +      +H YA+  G      V N+I+
Sbjct: 217 ALMLFRKMQEEGFLGDEITAISVA-SAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIV 275

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y                                K G+V+ A  VFD+M +R+   +N+
Sbjct: 276 GMY-------------------------------AKCGNVERARLVFDRMEERNGISWNS 304

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG 218
           M++G T+NG     + LF +M   +   +  +   ++S C   G    GR+LH+ V  S 
Sbjct: 305 MLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSK 364

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
                ++ NA++ MY  CG++  A ++F   +    D  S+NV++ G    G  +EAL  
Sbjct: 365 MDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALEL 424

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           F  M V  + P+++TF S++SAC                                S  G 
Sbjct: 425 FSRMQVEGVEPNDITFTSILSAC--------------------------------SHAGL 452

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYA--QRNLGRSAIL--AYLEMQSVGIRPDEFTFGS 394
           IDE    FA + +   +S    +  YA     LGR+  L  A+  ++ +  RP +  +G+
Sbjct: 453 IDEGRKCFADMTK---LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 509

Query: 395 LLAS---SGFIEMVEMIHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           LL +    G  E+ E+    +F +    T   V   + + YA + + K+   +  NM  R
Sbjct: 510 LLLACRIHGNTELGEIAANNLFQLEPEHTGYYV--LMSNIYAASNKWKEVEMVRQNMKSR 567

Query: 451 --------NIITWNTLINGF 462
                   ++I + T ++GF
Sbjct: 568 GLKKPAAFSVIEFGTEVHGF 587


>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
 gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
          Length = 963

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 196/623 (31%), Positives = 337/623 (54%), Gaps = 49/623 (7%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF-REM 180
           D+Y  +  +SA  + G +D A ++F  + +++    N +I G  +    +  + +F    
Sbjct: 308 DLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTR 367

Query: 181 HKLDVRRDNY----SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFN 235
           + + V  D Y    S  +  S+ + GL + G++ H  + ++G + L ++V N L+ MY  
Sbjct: 368 NTIVVNADTYVVLLSAIAEYSIPEEGLRK-GKEAHGHMLRTGLTDLKIAVSNGLVNMYAK 426

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG +  A K+F+  +    D IS+N ++  L   G                        +
Sbjct: 427 CGAIDSASKIFQLMEA--TDRISWNTIISALDQNG------------------------L 460

Query: 296 SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
            ++SA      G QVH  A+K G +  TSVSN  + MY  CG + +   +F  + + D V
Sbjct: 461 KLLSA------GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEV 514

Query: 356 SWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAF 411
           SWN+M+   A      S  +  +  M   G+ P++ TF +LLA+   + ++E+    HA 
Sbjct: 515 SWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPLSVLELGKQFHAA 574

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQ 470
           V  +G++ +  V NALIS YAK+  +     +F NMS R + ++WN++I+G++ NG+  +
Sbjct: 575 VLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSMISGYIYNGYLQE 634

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            +     +L S    D  T S+ L++CA +++L  G ++H + ++++L S + + +A++ 
Sbjct: 635 AMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVD 694

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KCG +D + ++FN M +++  SWN++IS YA+HG G++A+  F+ M    R  PD  
Sbjct: 695 MYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKALETFEEMLR-SRESPDHV 753

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF +VLSACSHAGLV+ G   F+ M+ D+G +P  +H SC++DLLGRAG +D+ +  I  
Sbjct: 754 TFVSVLSACSHAGLVERGLEYFE-MMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQR 812

Query: 651 QHIQARSDNWWALFSACAAHGN---LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
             ++  +  W  +  AC    +   + LGR    +LLE E   P  YVL SN +AA G+W
Sbjct: 813 MPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIEPQNPVNYVLASNFHAATGMW 872

Query: 708 EEAANIRELLKRTGVIKQPGCSW 730
           E+ A  R  +++  V K+ G SW
Sbjct: 873 EDTAKARAGMRQATVKKEAGRSW 895



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 218/435 (50%), Gaps = 33/435 (7%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LH  + K G +  + + N L+  Y     +  A +VF+E      + +S+  ++ G    
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQR--NAVSWTCLLSGYVLQ 139

Query: 270 GRVEEALIRFRDML---VASLRPSELTFVSVMSACL---CPRVGY--QVHAQAMKSGFEA 321
           G  EEA   FR ML       RP+  TF +++ AC      R+G+  QVH    K+ + +
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199

Query: 322 YTSVSNAAITMYSSC--GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            T+V NA I+MY SC  G    A  +F     +D+++WN ++S YA++    S    +++
Sbjct: 200 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMD 259

Query: 380 MQS----VGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
           MQ     + +RP E TFGSL+     SSG   +++ +   V  +G  +++ V +AL+SA+
Sbjct: 260 MQREDSRIQLRPTEHTFGSLITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAF 319

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           A++  I +A  IF ++  +N +T N LI G +      + ++ F     + +  +  T  
Sbjct: 320 ARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVG-TRNTIVVNADTYV 378

Query: 492 VALSSCARIS----SLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFN 546
           V LS+ A  S     LR GK+ HG++L+  L   K+++ N ++ +YAKCG +D + ++F 
Sbjct: 379 VLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSASKIFQ 438

Query: 547 MMIEKDTISWNALISAYAQHG----EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +M   D ISWN +ISA  Q+G       + V C         +  D +    ++      
Sbjct: 439 LMEATDRISWNTIISALDQNGLKLLSAGQQVHCDAVKWG---LDLDTSVSNVLVKMYGEC 495

Query: 603 GLVDDGTRIFDSMVN 617
           G + D  ++F+SM +
Sbjct: 496 GAMSDCWKVFNSMAD 510



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 159/632 (25%), Positives = 273/632 (43%), Gaps = 88/632 (13%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LH   ++ GL     ++N +++ Y     L +  RVF E+   +  SWT  LS     G 
Sbjct: 82  LHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQGI 141

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            + A  VF  M     P       GC                     R  +++F ++L  
Sbjct: 142 TEEAFRVFRAMLREVEP-------GC---------------------RPTSFTFGTLLRA 173

Query: 199 CDAG---LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC--GNVVDACKVFEEAKGYV 253
           C  G    L F  Q+H L++K+ ++   +V NALI+MY +C  G  + A +VF+     +
Sbjct: 174 CQDGGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTP--I 231

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVA----SLRPSELTFVSVMSACLCPR---- 305
            D I++N +M   A  G V      F DM        LRP+E TF S+++A         
Sbjct: 232 RDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSLITATSLSSGSSA 291

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           V  QV    +KSG  +   V +A ++ ++  G IDEA  IF  L+EK+ V+ N +I    
Sbjct: 292 VLDQVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLV 351

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-------MIHAFVFINGII 418
           +++    A+  ++  ++  I  +  T+  LL++     + E         H  +   G+ 
Sbjct: 352 KQHCSEEAVKIFVGTRNT-IVVNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLT 410

Query: 419 T-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
              I VSN L++ YAK   I  A +IF  M   + I+WNT+I+    NG  +        
Sbjct: 411 DLKIAVSNGLVNMYAKCGAIDSASKIFQLMEATDRISWNTIISALDQNGLKL-------- 462

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
                                    L  G+Q+H   +K  L    S+ N ++ +Y +CG 
Sbjct: 463 -------------------------LSAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 497

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYA-QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +    +VFN M + D +SWN+++   A       E V  F  M   G I P++ TF  +L
Sbjct: 498 MSDCWKVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLI-PNKVTFVNLL 556

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           +A S   +++ G + F + V  +G +      + ++    ++G ++  E + ++   +  
Sbjct: 557 AALSPLSVLELGKQ-FHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRD 615

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           + +W ++ S    +G L+       L+L   Q
Sbjct: 616 AVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQ 647



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/393 (25%), Positives = 176/393 (44%), Gaps = 41/393 (10%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA-CT 134
           G Q+H  A++ GL     V+N ++ +Y     +    +VF+ + + D  SW + +    +
Sbjct: 466 GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMAS 525

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
               +    EVF+ M          M  G   N                       +F +
Sbjct: 526 SQAPISETVEVFNNM----------MRGGLIPN---------------------KVTFVN 554

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +L+      +LE G+Q H+ V K G      V NALI+ Y   G++     +F    G  
Sbjct: 555 LLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRR 614

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQV 310
            D +S+N M+ G    G ++EA+     ML +       TF  +++AC        G ++
Sbjct: 615 -DAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEM 673

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA  ++S  E+   V +A + MYS CG++D A  +F  + +++  SWN+MIS YA+  LG
Sbjct: 674 HAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLG 733

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFI--NGIITNIQVSNAL 427
           R A+  + EM      PD  TF S+L++     +VE  +  F  +  +GI+  I+  + +
Sbjct: 734 RKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCV 793

Query: 428 ISAYAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
           I    +  +I +  +    M  + N + W T++
Sbjct: 794 IDLLGRAGKIDKIKEYIQRMPMKPNALIWRTVL 826



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 163/373 (43%), Gaps = 61/373 (16%)

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           E +H  +   G+  ++ +SN L+++YAK  R+  A ++F  M  RN ++W  L++G++L 
Sbjct: 80  ENLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTCLLSGYVLQ 139

Query: 466 GFPVQGLQHFSELLMS---ELRPDEYTLSVALSSCARISSLRHG--KQIHGYVLKNNLIS 520
           G   +  + F  +L       RP  +T    L +C      R G   Q+HG + K    S
Sbjct: 140 GITEEAFRVFRAMLREVEPGCRPTSFTFGTLLRACQDGGPDRLGFATQVHGLLSKTEYAS 199

Query: 521 KMSLGNAMITLYAKC--GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
             ++ NA+I++Y  C  G    + RVF+    +D I+WNAL+S YA+ G   + VS F  
Sbjct: 200 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKG---DVVSTFTL 256

Query: 579 MQDVGR------IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---S 629
             D+ R      ++P + TF ++++A S   L    + + D +            L   S
Sbjct: 257 FMDMQREDSRIQLRPTEHTFGSLITATS---LSSGSSAVLDQVFVSVLKSGCSSDLYVGS 313

Query: 630 CMLDLLGRAGYLDEAERVINS------------------QH---------------IQAR 656
            ++    R G +DEA+ +  S                  QH               I   
Sbjct: 314 ALVSAFARHGLIDEAKDIFLSLKEKNAVTLNGLIVGLVKQHCSEEAVKIFVGTRNTIVVN 373

Query: 657 SDNWWALFSACAAHG----NLRLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAGLWEEA 710
           +D +  L SA A +      LR G+   G +L       K +V   L N+YA  G  + A
Sbjct: 374 ADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIDSA 433

Query: 711 ANIRELLKRTGVI 723
           + I +L++ T  I
Sbjct: 434 SKIFQLMEATDRI 446



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 141/348 (40%), Gaps = 59/348 (16%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P+  +    LAA + L     G Q HA  L+ G+     V N ++S Y  + D+ S +
Sbjct: 545 LIPNKVTFVNLLAALSPLSVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCE 604

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            +FS +                                 RD   +N+MI+G   NGY   
Sbjct: 605 HLFSNMSG------------------------------RRDAVSWNSMISGYIYNGYLQE 634

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +     M       D  +F+ +L+ C     LE G ++H+   +S     V V +AL+ 
Sbjct: 635 AMDCVWLMLHSGQIMDCCTFSIILNACASVAALERGMEMHAFGIRSHLESDVVVESALVD 694

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG V  A K+F        +  S+N M+ G A  G   +AL  F +ML +   P  
Sbjct: 695 MYSKCGRVDYASKLFNSMTQR--NEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDH 752

Query: 292 LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN-----------AAITMYSSCGKID 340
           +TFVSV+SAC         HA  ++ G E +  + +             I +    GKID
Sbjct: 753 VTFVSVLSAC--------SHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKID 804

Query: 341 EACMIFARLQEK-DIVSWNTMISTYAQRN------LGRSAILAYLEMQ 381
           +      R+  K + + W T++    Q        LGR A+   LE++
Sbjct: 805 KIKEYIQRMPMKPNALIWRTVLVACRQSKDGSKIELGREALRVLLEIE 852



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 42/202 (20%)

Query: 34  SGHYQDALH-LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           +G+ Q+A+  +++ +HS   +  D  + S  L ACA++     G ++HA+ +R+ L++  
Sbjct: 629 NGYLQEAMDCVWLMLHSGQIM--DCCTFSIILNACASVAALERGMEMHAFGIRSHLESDV 686

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V + ++ +Y                               +K G VDYA ++F+ M  R
Sbjct: 687 VVESALVDMY-------------------------------SKCGRVDYASKLFNSMTQR 715

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
           +   +N+MI+G   +G     +  F EM +     D+ +F SVLS C  AGL+E G +  
Sbjct: 716 NEFSWNSMISGYARHGLGRKALETFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYF 775

Query: 212 SLVTKSG-------FSCLVSVV 226
            ++   G       +SC++ ++
Sbjct: 776 EMMPDHGILPQIEHYSCVIDLL 797


>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 193/573 (33%), Positives = 309/573 (53%), Gaps = 15/573 (2%)

Query: 167  NGYEDIGIGLFREMHKL--DVRRDNY-SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL 222
            NG   +G+    EMH++  D  R N+ +       C + G L  GR LH LV K+G    
Sbjct: 542  NGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYS 601

Query: 223  VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
              V ++L++MY  CGN  +A + F E      D IS+  M+   + +G   E +  F +M
Sbjct: 602  QVVQSSLLSMYSKCGNPEEAHRSFCEVLNK--DIISWTSMISAYSRMGWATECIDMFWEM 659

Query: 283  LVASLRPSELTFVSVMSACLCPRVGYQV---HAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
            LV+ + P  +    ++S+       ++    H   ++  +     V NA ++MY   G +
Sbjct: 660  LVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFL 719

Query: 340  DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
              A   F R+ E++  +WN M+S Y +  L    I  + EMQ +GI  D  +  S+++S 
Sbjct: 720  KLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSC 779

Query: 400  ---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
               G   +   IH ++  N +  N+ V+N+LI  Y K+  +  A +IF  + PR+I+TWN
Sbjct: 780  SQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWN 838

Query: 457  TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            TLI+ +   G   + L  + ++++ +L+P+  TL   LS+C+ ++SL  G+++H Y+   
Sbjct: 839  TLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGG 898

Query: 517  NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                 +S+  A+I +YAKCG L+ S  +FN M E+D I+WN +IS Y  HG+ + A+  F
Sbjct: 899  KFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXF 958

Query: 577  KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
            + M++    KP+  TF AVLSAC+HAGLV +G  +F  M  DY   P   H +CM+DLLG
Sbjct: 959  QQMEE-SSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKM-QDYSVAPNLKHYACMVDLLG 1016

Query: 637  RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
            R+G L EAE ++ S  I      W AL S+C  H  + +G  IA   +  + +    YV+
Sbjct: 1017 RSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVM 1076

Query: 697  LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            +SN+Y++ G WEEA   R ++K  GV K+ G S
Sbjct: 1077 ISNMYSSIGKWEEAEKARGIMKERGVRKKTGWS 1109



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/524 (26%), Positives = 251/524 (47%), Gaps = 44/524 (8%)

Query: 54   KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
            +P+  +L     AC NL     G  LH   ++ G+     V +++LS+Y    +     R
Sbjct: 564  RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHR 623

Query: 114  VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
             F E+ N D+ SWT+ +SA ++MG   +A E  D         +  +++G   +G   I 
Sbjct: 624  SFCEVLNKDIISWTSMISAYSRMG---WATECIDMF-------WEMLVSGIYPDG---IV 670

Query: 174  IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            I                SF++ + V +A      +  H L+ +  ++    V NAL++MY
Sbjct: 671  ISCMLS-----------SFSNSMRVFEA------KAFHGLIIRRHYTLDQMVQNALLSMY 713

Query: 234  FNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
               G +  A K F    G V +    ++N+M+ G   +G + + +  FR+M    +    
Sbjct: 714  CKFGFLKLAEKFF----GRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDS 769

Query: 292  LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
             + VSV+S+C       +   +H   +K+  +   SV+N+ I MY   G +  A  IF R
Sbjct: 770  NSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCR 829

Query: 349  LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMV 405
            +  +DIV+WNT+IS+YA       A+  Y +M    ++P+  T   +L++      +E  
Sbjct: 830  IP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEG 888

Query: 406  EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            E +H ++       N+ ++ ALI  YAK  +++++ +IF++M  R++ITWN +I+G+ ++
Sbjct: 889  EKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMH 948

Query: 466  GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
            G     ++ F ++  S  +P+  T    LS+CA    ++ GK + G +   ++   +   
Sbjct: 949  GDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHY 1008

Query: 526  NAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
              M+ L  + G+L +    V +M I  D   W AL+S+   H E
Sbjct: 1009 ACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNE 1052



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 223/481 (46%), Gaps = 26/481 (5%)

Query: 28   LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
            L+  S+ G+ ++A   F ++     L  DI S ++ ++A + +  A     +    L +G
Sbjct: 609  LSMYSKCGNPEEAHRSFCEV-----LNKDIISWTSMISAYSRMGWATECIDMFWEMLVSG 663

Query: 88   LKAYPH--VANTILSLYKNARDLVSVKRVFSEI----QNPDVYSWTTFLSACTKMGHVDY 141
            +  YP   V + +LS + N+  +   K     I       D       LS   K G +  
Sbjct: 664  I--YPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKL 721

Query: 142  ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR-RDNYSFASVLSVCD 200
            A + F ++ +++   +N M++G  + G     IGLFREM  L +    N   + V S   
Sbjct: 722  AEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQ 781

Query: 201  AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
             G     R +H  + K+     VSV N+LI MY   GN+  A ++F        D +++N
Sbjct: 782  LGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPR---DIVTWN 838

Query: 261  VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
             ++   A  G   EAL  +  M++  L+P+  T V V+SAC        G +VH      
Sbjct: 839  TLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGG 898

Query: 318  GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             FE   S++ A I MY+ CG+++++  IF  + E+D+++WN MIS Y      RSAI  +
Sbjct: 899  KFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXF 958

Query: 378  LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             +M+    +P+  TF ++L   A +G ++  + +   +    +  N++    ++    ++
Sbjct: 959  QQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRS 1018

Query: 435  ERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
              +++A  +  +M  SP   + W  L++   ++     G++     + S++  D Y + +
Sbjct: 1019 GNLQEAEALVLSMPISPDGGV-WGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMI 1077

Query: 493  A 493
            +
Sbjct: 1078 S 1078



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 137/343 (39%), Gaps = 83/343 (24%)

Query: 21   LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
            ++  N  +++ +  GH+ +AL L+ ++     LKP+  +L   L+AC++L +   G ++H
Sbjct: 834  IVTWNTLISSYAHCGHFAEALSLYDKM-VLEDLKPNSATLVXVLSACSHLASLEEGEKVH 892

Query: 81   AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             Y      +    +A  ++ +Y     L   + +F+ +   DV +W              
Sbjct: 893  NYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNV------------ 940

Query: 141  YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                               MI+G   +G     I  F++M +   + +  +F +VLS C 
Sbjct: 941  -------------------MISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACA 981

Query: 200  DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             AGL++ G+ L                          G + D   V    K Y C     
Sbjct: 982  HAGLVKEGKYLF-------------------------GKMQDY-SVAPNLKHYAC----- 1010

Query: 260  NVMMDGLASVGRVEEALIRFRDMLVASL--RPSELTFVSVMSACLCP---RVGYQVHAQA 314
              M+D L   G ++EA     + LV S+   P    + +++S+C       +G ++   A
Sbjct: 1011 --MVDLLGRSGNLQEA-----EALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHA 1063

Query: 315  MKSGFEA---YTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
            + S  E    Y  +SN    MYSS GK +EA      ++E+ +
Sbjct: 1064 IXSDVENDGYYVMISN----MYSSIGKWEEAEKARGIMKERGV 1102



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 56/299 (18%), Positives = 119/299 (39%), Gaps = 46/299 (15%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEK---DIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           N  I++Y S G++++   +   L++    D+V++N  ++  A +N   +A    LE++  
Sbjct: 196 NHMISLYISDGQLEKVPGMIQELKKNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKA 255

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK--NERIKQAY 441
            I PD  T+ SL                       TN+ +   L+   A   NE  K+  
Sbjct: 256 KIDPDWVTYSSL-----------------------TNLYIKKGLLDKAATTLNEMEKRT- 291

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS---ELRPDEYTLSVALSSCA 498
                 S +  I +++LI+    N     G+    + L S   ++   EYT    +SS  
Sbjct: 292 ------SRKGRIAYSSLIS-LHTNMQDKDGVHRIWKKLKSIFHKMNDAEYT--CMISSLV 342

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT----I 554
           ++      + ++      +      + N ++  Y    +++ + + +N M+E+       
Sbjct: 343 KLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQMVERGITPSYT 402

Query: 555 SWNALISAYAQHGEGKEAVSCF-KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
           +W  L   Y +  + ++ +  F KA+  V +  PD+     V       G ++   ++ 
Sbjct: 403 TWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAEKVL 461


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  318 bits (814), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 299/565 (52%), Gaps = 42/565 (7%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA------------KGYVC 254
           G+ LH+L  KS  +    + N  + +Y  CG +  A   F+              K Y  
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAK 86

Query: 255 DH-----------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           D                  +SYN ++ G A       A++ F+ M          T   +
Sbjct: 87  DSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGL 146

Query: 298 MSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDI 354
           ++AC C RV    Q+H  A+  GF++Y+SV+NA +T YS  G + EA  +F  +   +D 
Sbjct: 147 IAAC-CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDE 205

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAF 411
           VSWN+MI  Y Q   G  A+  Y EM   G + D FT  S+L +   ++ +      H  
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265

Query: 412 VFINGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNG-F 467
           +   G   N  V + LI  Y+K    + +  + ++F  +   +++ WNT+I+G+ +N   
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEH 325

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGN 526
             + ++ F ++     RPD+ +     S+C+ +SS   GKQIHG  +K+N+ S ++S+ N
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNN 385

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+I+LY K G+L  + RVF+ M E + +S+N +I  YAQHG G EA+  ++ M D G I 
Sbjct: 386 ALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSG-IA 444

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P+  TF A+LSAC+H G VD+G + F++M   +   P  +H SCM+DLLGRAG L+EAER
Sbjct: 445 PNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I++   +  S  W AL  AC  H N+ L    A  L+  +    + YV+L+N+YA AG 
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGK 564

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           WEE A++R+ ++   + K+PGCSWI
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWI 589



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 257/540 (47%), Gaps = 18/540 (3%)

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           R+   G  LHA  +++ + +  +++N  ++LY     L   +  F   + P+V+S+   +
Sbjct: 22  RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIV 81

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
            A  K   +  A ++FD+ P  D   YN +I+G  +       + LF+ M +L    D +
Sbjct: 82  KAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGF 141

Query: 191 SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           + + +++ C    ++  +QLH      GF    SV NA +T Y   G + +A  VF    
Sbjct: 142 TLSGLIAAC-CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VG 307
           G + D +S+N M+          +AL  +++M+    +    T  SV++A         G
Sbjct: 201 G-LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID---EACMIFARLQEKDIVSWNTMISTY 364
            Q H + +K+GF   + V +  I  YS CG  D   ++  +F  +   D+V WNTMIS Y
Sbjct: 260 RQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGY 319

Query: 365 A-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITN 420
           +        A+ ++ +MQ +G RPD+ +F  + ++   +      + IH     + I +N
Sbjct: 320 SMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSN 379

Query: 421 -IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            I V+NALIS Y K+  +  A ++F  M   N +++N +I G+  +G   + L+ +  +L
Sbjct: 380 RISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRML 439

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDL 538
            S + P+  T    LS+CA    +  G++    + +   I  +    + MI L  + G L
Sbjct: 440 DSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKL 499

Query: 539 DCSLRVFNMMIEKD-TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           + + R  + M  K  +++W AL+ A  +H   K      +A +++  ++P  AT   +L+
Sbjct: 500 EEAERFIDAMPYKPGSVAWAALLGACRKH---KNMALAERAAKELMVMQPLAATPYVMLA 556



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 47/349 (13%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKN--ARDLVS 110
            K D+++L++ L A  +L +   G Q H   ++AG     HV + ++  Y     RD +S
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMS 295

Query: 111 -VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN-G 168
             ++VF EI +PD+  W                               N MI+G + N  
Sbjct: 296 DSEKVFQEILSPDLVLW-------------------------------NTMISGYSMNEE 324

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVV 226
           + +  +  FR+M ++  R D+ SF  V S C +      G+Q+H L  KS   S  +SV 
Sbjct: 325 HSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVN 384

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NALI++Y+  GN++DA +VF+       + +S+N M+ G A  G   EAL  ++ ML + 
Sbjct: 385 NALISLYYKSGNLLDARRVFDRMPEL--NAVSFNCMIKGYAQHGHGTEALRLYQRMLDSG 442

Query: 287 LRPSELTFVSVMSACL-CPRVGY-QVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEA 342
           + P+ +TFV+++SAC  C +V   Q +   MK  F+      + +  I +    GK++EA
Sbjct: 443 IAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502

Query: 343 -CMIFARLQEKDIVSWNTMIST---YAQRNLGRSAILAYLEMQSVGIRP 387
              I A   +   V+W  ++     +    L   A    + MQ +   P
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATP 551



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 86/336 (25%)

Query: 36  HYQDALHLFVQIHS-SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-H 93
           H ++A+  F Q+    H+  PD  S     +AC+NL + + G Q+H  A+++ + +    
Sbjct: 325 HSEEAVKSFRQMQRIGHR--PDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRIS 382

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N ++SLY  + +L+  +RV                               FD+MP+ +
Sbjct: 383 VNNALISLYYKSGNLLDARRV-------------------------------FDRMPELN 411

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
              +N MI G  ++G+    + L++ M    +  +N +F ++LS C   G ++ G++   
Sbjct: 412 AVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQK--- 468

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
                               YFN   + +  K+  EA+ Y C       M+D L   G++
Sbjct: 469 --------------------YFN--TMKETFKIEPEAEHYSC-------MIDLLGRAGKL 499

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI-- 330
           EEA  RF D +    +P  + + +++ AC      ++  A A ++  E       AA   
Sbjct: 500 EEAE-RFIDAM--PYKPGSVAWAALLGACR----KHKNMALAERAAKELMVMQPLAATPY 552

Query: 331 ----TMYSSCGKIDE-----ACMIFARLQEKDIVSW 357
                MY+  GK +E       M   R+++K   SW
Sbjct: 553 VMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSW 588


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 203/708 (28%), Positives = 350/708 (49%), Gaps = 49/708 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G    AL +F ++ +   + P+ ++L++ L AC+   ++ F +Q+H   ++      P+
Sbjct: 129 AGDSDQALDMFARM-NQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPY 187

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V ++++  Y                               T  G +D A  V   +P+R 
Sbjct: 188 VGSSLVEAY-------------------------------TSCGELDAAETVLLGLPERS 216

Query: 154 LPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
              +NA++ G   +G Y  + I + + +   D     Y+  +VL  C + GL ++G+ +H
Sbjct: 217 DVSWNALLNGYARHGDYRRVMIIIEKLVASGD-EISKYTLPTVLKCCMELGLAKYGQSVH 275

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           + V K G      + + L+ MY  C +  +A +VF        D +  + M+        
Sbjct: 276 ASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEP--DVVHCSAMISCFDRHDM 333

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----YQVHAQAMKSGFEAYTSVS 326
             EAL  F  M    ++P+   FV +  A +  R G       VHA  +KSGF     V 
Sbjct: 334 AWEALDLFVKMSGMGVKPNHYIFVGI--AGVASRTGDANLCRSVHAYIVKSGFAMLKGVG 391

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A + MY   G + +A + F  + E D  SWNT++S +   +     +  + +M   G  
Sbjct: 392 DAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFS 451

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            +++T+ S+L    S   +     +HA +  +G+  +  VS  L+  YA++     A  +
Sbjct: 452 ANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLV 511

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  +  R+  +W  +++G+       + +++F  +L   +RP + TL+V+LS C+ ++SL
Sbjct: 512 FEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASL 571

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G Q+H + +K+   S +  G A++ +Y KCG++  +  +F+    +D ++WN +I  Y
Sbjct: 572 GSGLQLHSWAIKSGWNSSVVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGY 630

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           +QHG G +A+  FK M D G+ +PD  TF  VLSACSHAGL+++G + F S+ + YG  P
Sbjct: 631 SQHGHGYKALDAFKQMVDEGK-RPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITP 689

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +CM+D+L +AG L EAE +IN   +   S  W  +  AC  H N+ +    A  L
Sbjct: 690 TMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERL 749

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E E    S  +LLSNIYA  G W +   +R +L   GV K+PGCSWI
Sbjct: 750 FELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWI 797



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/558 (25%), Positives = 257/558 (46%), Gaps = 41/558 (7%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           +  L  CA  R    G +LHA  LR+ L     + +++L++Y     LV  +RVF  + +
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            D+ +WT  +SA T  G  D A ++F +M             G   NG            
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQE----------GIAPNG------------ 151

Query: 181 HKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                    ++ ASVL  C  G   +F  Q+H  V K        V ++L+  Y +CG  
Sbjct: 152 ---------FTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVGSSLVEAYTSCGE- 201

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
           +DA +          D +S+N +++G A  G     +I    ++ +    S+ T  +V+ 
Sbjct: 202 LDAAETVLLGLPERSD-VSWNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLK 260

Query: 300 ACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C+     + G  VHA  +K G E    +++  + MYS C   +EA  +F R+ E D+V 
Sbjct: 261 CCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVH 320

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVF 413
            + MIS + + ++   A+  +++M  +G++P+ + F     + + +G   +   +HA++ 
Sbjct: 321 CSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIV 380

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +G      V +A+++ Y K   ++ A   F  +   +  +WNT+++ F       QGL+
Sbjct: 381 KSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLR 440

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++       ++YT    L  C  + +LR G Q+H  +LK+ L +   +   ++ +YA
Sbjct: 441 IFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYA 500

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           + G    +  VF  + E+D  SW  ++S YA+  E ++ V  F++M     I+P  AT  
Sbjct: 501 QSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLR-ENIRPSDATLA 559

Query: 594 AVLSACSHAGLVDDGTRI 611
             LS CS    +  G ++
Sbjct: 560 VSLSVCSDMASLGSGLQL 577



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 153/606 (25%), Positives = 262/606 (43%), Gaps = 55/606 (9%)

Query: 9   TIAGNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSL 60
           T  G  + ++ +LL L        N  L   +R G Y+  + +  ++ +S   +   Y+L
Sbjct: 197 TSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGD-EISKYTL 255

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
            T L  C  L  A +G  +HA  ++ GL+    + + ++ +Y           VF  I  
Sbjct: 256 PTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDE 315

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           PDV   +  +S   +    D A E  D                            LF +M
Sbjct: 316 PDVVHCSAMISCFDRH---DMAWEALD----------------------------LFVKM 344

Query: 181 HKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             + V+ ++Y F  +  V    G     R +H+ + KSGF+ L  V +A++ MY   G V
Sbjct: 345 SGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAV 404

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            DA   F+    +  D  S+N ++    S    E+ L  F+ M       ++ T+VSV+ 
Sbjct: 405 QDATVTFDLI--HEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLR 462

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C   +  R G QVHA  +KSG +  T VS   + MY+  G    AC++F +L+E+D  S
Sbjct: 463 CCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFS 522

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG-SLLASSGFIEMVE--MIHAFVF 413
           W  ++S YA+       +  +  M    IRP + T   SL   S    +     +H++  
Sbjct: 523 WTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAI 582

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
            +G  +++ VS AL+  Y K   I  A  +FH    R+ + WNT+I G+  +G   + L 
Sbjct: 583 KSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALD 641

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLY 532
            F +++    RPD  T    LS+C+    L  G++    +     +   M     M+ + 
Sbjct: 642 AFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDIL 701

Query: 533 AKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           +K G L  +  + N M +  D+  W  ++ A   H   + A    +A + +  ++P  A+
Sbjct: 702 SKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAE---RAAERLFELEPHDAS 758

Query: 592 FTAVLS 597
            + +LS
Sbjct: 759 SSILLS 764



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 202/453 (44%), Gaps = 40/453 (8%)

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R G ++HA+ ++S     T + ++ + MY  CG++ +A  +F  +  +DIV+W  MIS +
Sbjct: 67  RRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAH 126

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSG--FIEMVEMIHA-FVFINGIITN 420
                   A+  +  M   GI P+ FT  S+L A SG    +    +H   V +NG + +
Sbjct: 127 TAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNG-LDD 185

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
             V ++L+ AY     +  A  +   +  R+ ++WN L+NG+  +G   + +    +L+ 
Sbjct: 186 PYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVA 245

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           S     +YTL   L  C  +   ++G+ +H  V+K  L +   L + ++ +Y++C   + 
Sbjct: 246 SGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEE 305

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  VF  + E D +  +A+IS + +H    EA+  F  M  +G +KP+   F  +    S
Sbjct: 306 AYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMG-VKPNHYIFVGIAGVAS 364

Query: 601 -----------HAGLVDDGTRIF----DSMVNDYGFIPAEDHLSCMLDLLGRAGYL---- 641
                      HA +V  G  +     D+++N Y  + A    +   DL+          
Sbjct: 365 RTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNT 424

Query: 642 -----------DEAERVINSQHIQARSDNWWALFSA---CAAHGNLRLGRIIAGLLLERE 687
                      ++  R+      +  S N +   S    C +  NLR G  +   +L+  
Sbjct: 425 ILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSG 484

Query: 688 -QDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
            Q+   V  +L ++YA +G +  A  + E LK 
Sbjct: 485 LQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 10/209 (4%)

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           + AL  CA   +LR G+++H  +L++ L     L ++++ +Y KCG L  + RVF+ M  
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D ++W A+ISA+   G+  +A+  F  M   G I P+  T  +VL ACS         +
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEG-IAPNGFTLASVLKACSGGSHSKFTHQ 172

Query: 611 IFDSMVNDYGFIPAEDHL--SCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSAC 667
           +   +V   G    +D    S +++     G LD AE V+    +  RSD +W AL +  
Sbjct: 173 VHGQVVKLNGL---DDPYVGSSLVEAYTSCGELDAAETVLLG--LPERSDVSWNALLNGY 227

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           A HG+ R   II   L+    D+ S Y L
Sbjct: 228 ARHGDYRRVMIIIEKLVA-SGDEISKYTL 255


>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
 gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 185/591 (31%), Positives = 318/591 (53%), Gaps = 18/591 (3%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-- 206
           M DRD+  +NA+I GC+ NGY+   + +F ++ +        +   ++  C  G  EF  
Sbjct: 1   MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSC--GRREFVF 58

Query: 207 -GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +H    K+G      V NAL  MY   G++  A  +FEE +      +S+N M+  
Sbjct: 59  QGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSV--VSWNTMIGA 116

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            A  G   E+++ F+ M+   +  + +T +S++ A + P +   +H  A+K+G     SV
Sbjct: 117 YAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPEL---IHCYAIKTGLINNGSV 173

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             + + +Y+ CG  + A +++    +K++VS   +IS+YA++      +  +  MQ + +
Sbjct: 174 VTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDM 233

Query: 386 RPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           + D     S+L   G  +   M     +H +   NG+ T+  VSN LIS Y K   I+ A
Sbjct: 234 KLDSVAMVSIL--HGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAA 291

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F+ M  + +I+WN++I+G +  G     ++ F ++ M  L PD  T++  L+ C+++
Sbjct: 292 ISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQL 351

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             LR G+++H Y+L+NNL  +  +G ++I +Y KCG +  + RVF  + E    +WN +I
Sbjct: 352 GYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMI 411

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y+ +G    A++C+  M++ G ++PD+ TF  VL+AC H GL+ +G + F  M  ++G
Sbjct: 412 SGYSWYGLEHNALNCYSKMREQG-LEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFG 470

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
            +P   H +CM+ LLGRAG  +EA   I +   +  S  W AL +AC  H  ++LG  +A
Sbjct: 471 MVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLA 530

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L   +     +YVL+SN+YAA   W +AA +RE++K  G     G S I
Sbjct: 531 KKLYLLDYKNCGLYVLMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVSQI 581



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 243/563 (43%), Gaps = 57/563 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLA----ACANLRNAAFG 76
           ++  N  +   SR+G+  DAL +FVQ+     L+     L TTL     +C        G
Sbjct: 6   IVSWNALICGCSRNGYDVDALEIFVQL-----LREGFSPLQTTLVGLVPSCGRREFVFQG 60

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H + ++ G+     V N +  +Y  + DL + + +F E+++  V S           
Sbjct: 61  RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVS----------- 109

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                               +N MI     NG+ +  + +F+ M +  V  +  +  S+L
Sbjct: 110 --------------------WNTMIGAYAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLL 149

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
               +  L     +H    K+G     SVV +L+ +Y  CG+   A  ++        + 
Sbjct: 150 PANISPEL-----IHCYAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQK--NL 202

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQ 313
           +S   ++   A  G ++  +  F  M    ++   +  VS++     P    +G  +H  
Sbjct: 203 VSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGY 262

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K+G + +  VSN  I+MY     I+ A  +F  + EK ++SWN++IS   Q      A
Sbjct: 263 ALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDA 322

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  + +M+  G+ PD  T  SLL      G++ + E +H ++  N +     V  +LI  
Sbjct: 323 MKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDM 382

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   I  A ++F ++    + TWNT+I+G+   G     L  +S++    L PD  T 
Sbjct: 383 YTKCGSILLAERVFKSIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITF 442

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDLDCSLR-VFNM 547
              L++C     L  GK+ H  ++     ++  +     M+ L  + G  + +L  + NM
Sbjct: 443 LGVLAACIHGGLLHEGKK-HFQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNM 501

Query: 548 MIEKDTISWNALISAYAQHGEGK 570
             E D+  W AL++A   H E K
Sbjct: 502 ESEPDSAVWGALLNACCIHQEIK 524


>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 730

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 183/570 (32%), Positives = 302/570 (52%), Gaps = 45/570 (7%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+QLH+L+   GF     +V  L+T Y N   + DA  + E +   +   + +N+++
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSN--ILHPLPWNLLI 166

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
                 G   EAL  ++ M    +RP + T+ SV+ AC   L    G ++HA    S   
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V N+ ++MY+  G++  A  +F  + E+D VSWNTMIS YA + + + A   + +M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286

Query: 381 QSVGIRPDEFTF----GSLLASSGFIEMVEMIHAF----VFINGIITNI----------- 421
           +  GI  +  T+    G  + S  F E +E++       + ++ + T I           
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAI 346

Query: 422 -------------------QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                               V NALI+ Y++ + ++ AY +F +   +NIITWN++++G+
Sbjct: 347 KLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGY 406

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISK 521
                  +    F E+L+S + P+  T++  L  CAR+++L+HGK+ H Y+L+       
Sbjct: 407 THMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDY 466

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + L N+++ +YA+ G +  + R+F+ +  +D +++ +LI+ Y   GEG+EA+  F  M+ 
Sbjct: 467 LLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKK 526

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
              IKPD  T  AVLSACSH+GLV +G ++F+ M + YG IP  +H +CM+DL GRAG L
Sbjct: 527 R-HIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLL 585

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
            +A+ +I     +  S  W  L  AC  HGN  +G   A  LLE   +    YVL++N+Y
Sbjct: 586 HKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMY 645

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AAAG W + A +R  ++  GV K PGC+W+
Sbjct: 646 AAAGCWSKLAKVRTYMRDLGVRKAPGCAWV 675



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 136/593 (22%), Positives = 260/593 (43%), Gaps = 82/593 (13%)

Query: 27  SLANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAA--CANLRNAAFGNQLHAY 82
           SL   +  G+   A   F  +Q H+S     D+   S +     C NL++ + G QLH  
Sbjct: 59  SLKGFASQGNLLKAFKTFSLIQRHASCSTSDDVVLHSVSSLLLSCVNLKSLSQGKQLHTL 118

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
            +  G + +P +   +++ Y N  DL++     +E  N                      
Sbjct: 119 IISLGFEQHPIIVPKLVTFYTNF-DLLADAHTITENSN---------------------- 155

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
             +   +P      +N +I+    NG     +  +++M    +R D +++ SVL  C   
Sbjct: 156 --ILHPLP------WNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEK 207

Query: 203 L-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           L + FG++LH+ +  S     + V N+L++MY   G +  A  +FE       D +S+N 
Sbjct: 208 LDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENM--LERDDVSWNT 265

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL------------------- 302
           M+ G AS G  +EA   F  M V  +  + +T+ ++   C+                   
Sbjct: 266 MISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYG 325

Query: 303 --------------CP-----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
                         C      ++G ++H  A++S ++   +V NA ITMYS C  +  A 
Sbjct: 326 IDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAY 385

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
            +F   + K+I++WN+M+S Y   +    A   + EM   GI P+  T  S+L   A   
Sbjct: 386 NLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVA 445

Query: 401 FIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
            ++  +  H ++    G    + + N+L+  YA++ ++ +A ++F ++S R+ +T+ +LI
Sbjct: 446 NLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLI 505

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NL 518
            G+ + G   + L+ F E+    ++PD  T+   LS+C+    +  G ++   +     +
Sbjct: 506 AGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGI 565

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGK 570
           I ++     M+ L+ + G L  +  +   M  + + + W  L+ A   HG  +
Sbjct: 566 IPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAE 618



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 85/171 (49%), Gaps = 6/171 (3%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +T  + ++  N  L+  +     ++A  LF ++  S  ++P+  ++++ L  CA + N  
Sbjct: 390 STRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLS-GIEPNYVTIASILPLCARVANLQ 448

Query: 75  FGNQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            G + H Y LR AG K Y  + N+++ +Y  +  ++  KR+F  I   D  ++T+ ++  
Sbjct: 449 HGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGY 508

Query: 134 TKMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM 180
              G    A ++FD+M  R    D     A+++ C+ +G    GI LF  M
Sbjct: 509 GIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELM 559


>gi|414867301|tpg|DAA45858.1| TPA: hypothetical protein ZEAMMB73_727333 [Zea mays]
          Length = 805

 Score =  318 bits (814), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 221/728 (30%), Positives = 364/728 (50%), Gaps = 54/728 (7%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L + N  + ++ R+G+ ++A+ L+  +    ++  D  +++  L +C  LRN   G  +H
Sbjct: 109 LAEWNSVMVDIFRAGYPEEAILLYRGL-KLRQIDLDEKTVTFGLKSCIELRNLLLGKGMH 167

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A +++ GL     V ++++ LY                               +K+  +D
Sbjct: 168 ADSVKLGLSRDKFVGSSLVGLY-------------------------------SKLARMD 196

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR---EMHKLDVRRDNYSFASVLS 197
            + + F+++ D+D+  Y +MITG +EN  +      F+   +M   ++  +  +  S+L 
Sbjct: 197 DSQKAFEEILDKDIVSYTSMITGYSEN-MDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQ 255

Query: 198 VC-DAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGYVCD 255
           V  + G +  G+ +H    +        V+  +L+ MY  CG    A  V + +   V  
Sbjct: 256 VAGNLGAIREGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGACQLASAVLKNSAQSVA- 314

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSAC--LCPRVGY--QV 310
             S+N M+ GL   G+   A+     ML    + P  +T+ +V+SAC  LC   GY   V
Sbjct: 315 --SWNAMLAGLVRTGQSGNAIHYLYIMLYEHKVVPDSVTYANVISACAELCNS-GYAASV 371

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HA  ++        ++ A I +Y  C +I  +  +F +L  KD VS+N MI  Y Q  + 
Sbjct: 372 HAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQLVVKDTVSYNAMIYGYLQNGMV 431

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNAL 427
             AI    EM +  + P+  T  SLLA+            IH F   +G  +N+ ++N +
Sbjct: 432 NEAIALLKEMVTECVAPNFVTILSLLAAIADHKDFARGRWIHGFSIRHGFCSNVDIANQI 491

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL--RP 485
           I  Y+   +I  A  +F +   +N+I+W T++ G L  G   Q ++ F +LLM +   +P
Sbjct: 492 IRMYSGCGKIASARIVFASFENKNLISWTTMMMGCLFCGHGGQTVELF-QLLMQQHDNKP 550

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   +  A+ + +    L+  KQ+H +V +  L       N++IT YAKCG LD S+ +F
Sbjct: 551 DSIAVMTAIQAVSEFGHLKGVKQVHCFVYRALLEKDTKTMNSLITAYAKCGRLDLSVSLF 610

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +  +D  SWN++ISAY  HG   + +  FK M++ G I PD  TF++VLSACSHAGL+
Sbjct: 611 LSLEHRDLDSWNSMISAYGMHGFYTKVLEMFKLMEE-GNINPDGLTFSSVLSACSHAGLI 669

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            +G  IF SM + Y   P E+H  C +DL+ RAG+L+E  + I    +  +S    AL S
Sbjct: 670 KEGLHIFQSMTSMYSVRPQEEHYGCFVDLMSRAGHLEEGYKFIKLSTLNDKSSVLCALLS 729

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           AC  +GN  LG++I+  LLE  Q  P  Y L+S ++A  G W ++A+IR   K  G+ K 
Sbjct: 730 ACRTYGNTMLGQVISNELLEVGQQNPGTYALISEVFAQKGQWNKSASIRNRAKENGLRKL 789

Query: 726 PGCSWIGS 733
           PG S I S
Sbjct: 790 PGSSLIES 797



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 132/591 (22%), Positives = 256/591 (43%), Gaps = 30/591 (5%)

Query: 101 LYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           L++N  D+ S+K++ + +       DV   +  L     +G +      F    + DL  
Sbjct: 52  LFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNNDLAE 111

Query: 157 YNAMITGCTENGYEDIGIGLFR--EMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
           +N+++      GY +  I L+R  ++ ++D+     +F  + S  +   L  G+ +H+  
Sbjct: 112 WNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFG-LKSCIELRNLLLGKGMHADS 170

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV--GRV 272
            K G S    V ++L+ +Y     + D+ K FEE      D +SY  M+ G +       
Sbjct: 171 VKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDK--DIVSYTSMITGYSENMDSTS 228

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV-SNA 328
             A     DM  ++L  + +T VS++         R G  VH  +++        V   +
Sbjct: 229 WNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLETS 288

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRP 387
            + MY  CG    A  +      + + SWN M++   +     +AI   Y+ +    + P
Sbjct: 289 LVHMYMQCGACQLASAVLKN-SAQSVASWNAMLAGLVRTGQSGNAIHYLYIMLYEHKVVP 347

Query: 388 DEFTFGSL------LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           D  T+ ++      L +SG+   V   HA++    I  ++ ++ ALI  Y K  RI  + 
Sbjct: 348 DSVTYANVISACAELCNSGYAASV---HAYIIRRSIPLDVVLATALIKVYLKCTRITISK 404

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F+ +  ++ +++N +I G+L NG   + +    E++   + P+  T+   L++ A   
Sbjct: 405 RLFNQLVVKDTVSYNAMIYGYLQNGMVNEAIALLKEMVTECVAPNFVTILSLLAAIADHK 464

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
               G+ IHG+ +++   S + + N +I +Y+ CG +  +  VF     K+ ISW  ++ 
Sbjct: 465 DFARGRWIHGFSIRHGFCSNVDIANQIIRMYSGCGKIASARIVFASFENKNLISWTTMMM 524

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
                G G + V  F+ +      KPD       + A S  G +  G +     V     
Sbjct: 525 GCLFCGHGGQTVELFQLLMQQHDNKPDSIAVMTAIQAVSEFGHL-KGVKQVHCFVYRALL 583

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
                 ++ ++    + G LD +  +  S  ++ R  D+W ++ SA   HG
Sbjct: 584 EKDTKTMNSLITAYAKCGRLDLSVSLFLS--LEHRDLDSWNSMISAYGMHG 632



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 114/510 (22%), Positives = 247/510 (48%), Gaps = 22/510 (4%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGL 266
           ++LH+ V   G    V + + ++  Y + G +   CK     +G++ + ++ +N +M  +
Sbjct: 63  KKLHARVLTLGLGRDVILGSEILICYASLGVL---CKTRLCFQGFLNNDLAEWNSVMVDI 119

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
              G  EEA++ +R + +  +   E T    + +C+  R   +G  +HA ++K G     
Sbjct: 120 FRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKGMHADSVKLGLSRDK 179

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL---EM 380
            V ++ + +YS   ++D++   F  + +KDIVS+ +MI+ Y++ N+  ++  A+    +M
Sbjct: 180 FVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSE-NMDSTSWNAFKIVSDM 238

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGI-ITNIQVSNALISAYAKNER 436
               +  +  T  SLL  +G +  +   + +H +     I I++  +  +L+  Y +   
Sbjct: 239 SWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGISDEVLETSLVHMYMQCGA 298

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR--PDEYTLSVAL 494
            + A  +  N S +++ +WN ++ G +  G     + H+  +++ E +  PD  T +  +
Sbjct: 299 CQLASAVLKN-SAQSVASWNAMLAGLVRTGQSGNAI-HYLYIMLYEHKVVPDSVTYANVI 356

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S+CA + +  +   +H Y+++ ++   + L  A+I +Y KC  +  S R+FN ++ KDT+
Sbjct: 357 SACAELCNSGYAASVHAYIIRRSIPLDVVLATALIKVYLKCTRITISKRLFNQLVVKDTV 416

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           S+NA+I  Y Q+G   EA++  K M     + P+  T  ++L+A +       G  I   
Sbjct: 417 SYNAMIYGYLQNGMVNEAIALLKEMV-TECVAPNFVTILSLLAAIADHKDFARGRWIHGF 475

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
            +  +GF    D  + ++ +    G +  A R++ +        +W  +   C   G+  
Sbjct: 476 SIR-HGFCSNVDIANQIIRMYSGCGKIASA-RIVFASFENKNLISWTTMMMGCLFCGHGG 533

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
               +  LL+++  +KP    +++ I A +
Sbjct: 534 QTVELFQLLMQQHDNKPDSIAVMTAIQAVS 563



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/321 (21%), Positives = 142/321 (44%), Gaps = 21/321 (6%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           F  +   C   R   ++HA+ +  G      + +  +  Y+S G + +  + F      D
Sbjct: 49  FALLFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQGFLNND 108

Query: 354 IVSWNTMISTYAQRNLGRSAILAY--LEMQSVGIRPDEFTFG--------SLLASSGFIE 403
           +  WN+++    +      AIL Y  L+++ + +     TFG        +LL   G   
Sbjct: 109 LAEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLGKG--- 165

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +HA     G+  +  V ++L+  Y+K  R+  + + F  +  ++I+++ ++I G+ 
Sbjct: 166 ----MHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYS 221

Query: 464 --LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-IS 520
             ++       +  S++  S L  +  TL   L     + ++R GK +H Y ++ ++ IS
Sbjct: 222 ENMDSTSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSVHCYSIRRDIGIS 281

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              L  +++ +Y +CG    +  V      +   SWNA+++   + G+   A+     M 
Sbjct: 282 DEVLETSLVHMYMQCGACQLASAVLKNS-AQSVASWNAMLAGLVRTGQSGNAIHYLYIML 340

Query: 581 DVGRIKPDQATFTAVLSACSH 601
              ++ PD  T+  V+SAC+ 
Sbjct: 341 YEHKVVPDSVTYANVISACAE 361



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 112/227 (49%), Gaps = 3/227 (1%)

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            D   F  L  +   +  ++ +HA V   G+  ++ + + ++  YA    + +    F  
Sbjct: 44  SDVDKFALLFQNCTDVRSLKKLHARVLTLGLGRDVILGSEILICYASLGVLCKTRLCFQG 103

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
               ++  WN+++      G+P + +  +  L + ++  DE T++  L SC  + +L  G
Sbjct: 104 FLNNDLAEWNSVMVDIFRAGYPEEAILLYRGLKLRQIDLDEKTVTFGLKSCIELRNLLLG 163

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K +H   +K  L     +G++++ LY+K   +D S + F  +++KD +S+ ++I+ Y+++
Sbjct: 164 KGMHADSVKLGLSRDKFVGSSLVGLYSKLARMDDSQKAFEEILDKDIVSYTSMITGYSEN 223

Query: 567 GEGKEAVSCFKAMQDV--GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
            +   + + FK + D+    ++ ++ T  ++L    + G + +G  +
Sbjct: 224 MD-STSWNAFKIVSDMSWSNLEVNRVTLVSLLQVAGNLGAIREGKSV 269


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/566 (33%), Positives = 295/566 (52%), Gaps = 48/566 (8%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALI--TMYFNCGNVVDACKVF---EEAKGYVCDHISYNVM 262
           +Q+H+ + K+G    +  ++ LI  +     G++  A  +F   EE   ++     +N M
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFI-----WNSM 100

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           + GL+       AL+ F  M+ + + P+  TF  ++ +C        G Q+HA  +K GF
Sbjct: 101 IRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGF 160

Query: 320 EAYTSVSNAAITMYSSCGKI-------------------------------DEACMIFAR 348
            +   +  + I MY+  G++                               D A  +F  
Sbjct: 161 VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDE 220

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           +  KD+VSWN MI+ YAQ    + A+L + +M+   + P+E T  S+L   A S  +++ 
Sbjct: 221 MPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLG 280

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             + +++   G+ +N+++ NALI  Y+K   ++ A ++F +M  R++I+WN +I G+   
Sbjct: 281 NSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHM 340

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               + L  F E+L S + P E T    L SCA + ++  GK IH Y+ KN      SL 
Sbjct: 341 CSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS 400

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
            ++I LYAKCG++  + +VF+ M  K   SWNA+I   A HG+  +A   F  M   G I
Sbjct: 401 TSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG-I 459

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P++ TF  +LSAC HAGLVD G + F SMV DY   P   H  CM+DLLGRAG  +EAE
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAE 519

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            ++ +  ++     W +L  AC  HG + LG ++A  L E E D P  YVLLSNIYA AG
Sbjct: 520 SLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAG 579

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++ A IR  L   G+ K PGC+ I
Sbjct: 580 KWDDVARIRTRLNDRGMKKVPGCTTI 605



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 174/623 (27%), Positives = 288/623 (46%), Gaps = 89/623 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           D  +  +Q H S KL          L+ C ++R      Q+HA+ ++ GL       NT+
Sbjct: 21  DPPYRVLQEHPSLKL----------LSKCQSIRTF---KQIHAHIIKTGLH------NTL 61

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
            +L K    L+                     SA ++ G + YA  +F+ + + +L ++N
Sbjct: 62  FALSK----LIE-------------------FSAVSRSGDISYAISLFNSIEEPNLFIWN 98

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           +MI G + +    + +  F  M    V  ++Y+F  +L  C        G+Q+H+ V K 
Sbjct: 99  SMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKL 158

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAK------------GY------------- 252
           GF   V +  +LI MY   G + +A  VF+++             GY             
Sbjct: 159 GFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLF 218

Query: 253 ----VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
               V D +S+N M+ G A +GR +EAL+ F DM  A++ P+E T VSV+SAC       
Sbjct: 219 DEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALD 278

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  + +     G  +   + NA I MYS CG +  A  +F  + E+D++SWN MI  Y 
Sbjct: 279 LGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYT 338

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQ 422
                + A+  + EM + G+ P E TF S+L S    G I++ + IHA++  N    +  
Sbjct: 339 HMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTS 398

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +S +LI  YAK   I  A Q+F  M  +++ +WN +I G  ++G   +  + FS++    
Sbjct: 399 LSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDG 458

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCS 541
           + P+E T    LS+C     +  G+Q    ++++  IS  S     MI L  + G  + +
Sbjct: 459 IEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEA 518

Query: 542 LRVF-NMMIEKDTISWNALISAYAQHG--EGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +  NM ++ D   W +L+ A   HG  E  E V+     + +  ++PD      +LS 
Sbjct: 519 ESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVA-----ERLFELEPDNPGAYVLLSN 573

Query: 599 C-SHAGLVDDGTRIFDSMVNDYG 620
             + AG  DD  RI  + +ND G
Sbjct: 574 IYAGAGKWDDVARI-RTRLNDRG 595



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 200/414 (48%), Gaps = 39/414 (9%)

Query: 295 VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI--TMYSSCGKIDEACMIFARLQEK 352
           + ++S C   R   Q+HA  +K+G        +  I  +  S  G I  A  +F  ++E 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIH 409
           ++  WN+MI   +       A++ ++ M   G+ P+ +TF  LL S   +      + IH
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIK------------------------------- 438
           A V   G ++++ +  +LI+ YA++  +                                
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +A Q+F  M  +++++WN +I G+   G   + L  F ++  + + P+E T+   LS+CA
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           + ++L  G  +  ++    L S + L NA+I +Y+KCGDL  +  +F+ M+E+D ISWN 
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I  Y      KEA++ F+ M   G ++P + TF ++L +C+H G +D G  I  + +N 
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASG-VEPTEITFLSILPSCAHLGAIDLGKWI-HAYINK 390

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
                +    + ++DL  + G +  A +V +   I++ + +W A+    A HG 
Sbjct: 391 NFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLA-SWNAMICGLAMHGQ 443


>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
 gi|194704572|gb|ACF86370.1| unknown [Zea mays]
 gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
          Length = 700

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 229/738 (31%), Positives = 352/738 (47%), Gaps = 93/738 (12%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN-AAFGNQLH 80
            + N  L  L+RSG    A  LF           D   L  T+   A L   A  G    
Sbjct: 19  FRSNKELTRLARSGQLAAARRLF-----------DAMPLRNTVTYNAMLSALARHGRIDE 67

Query: 81  AYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           A AL  G+     V+ N +++   +   +   + +F  +   D +SWT  +S   + G +
Sbjct: 68  ARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDL 127

Query: 140 DYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           + A +V D+MP D+    YNAMI+G  +NG  D  + L REM   D+   N + A +   
Sbjct: 128 ELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQS 187

Query: 199 CD----------------------AGLLEFGRQLHSLVTKSGFSCLVSVVN-----ALIT 231
            +                      AG +  G     L   S F   +   N      L+ 
Sbjct: 188 GEMVRAVQFFDEMVKDMTSWNLMLAGFVRTG----DLNAASSFFAKIESPNVISWVTLLN 243

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            Y   G + DA  +F+       + +++NVM+DG   +  +EEA   F +M +     + 
Sbjct: 244 GYCRAGRIADARDLFDRMPER--NVVAWNVMLDGYVHLSPIEEACKLFDEMPI----KNS 297

Query: 292 LTFVSVMSACLCPRVGYQVHAQAM--KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           +++ +++S     R G    A+ +  K  F    +   A +  Y      D+A  IF  +
Sbjct: 298 ISWTTIISGL--ARAGKLQEAKDLLDKMSFNC-VAAKTALMHGYLQRNMADDARRIFDGM 354

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIH 409
           +  D V WNTMIS Y Q  +   A+L +  M      P++             +MV    
Sbjct: 355 EVHDTVCWNTMISGYVQCGILEEAMLLFQRM------PNK-------------DMVSW-- 393

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
                          N +I+ YA++ ++ +A  IF  M+ RN ++WN++I+GF+ N   V
Sbjct: 394 ---------------NTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFV 438

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L HF  +     R D  T +  L +CA ++ L  G+Q+H  ++++  I+    GNA+I
Sbjct: 439 DALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALI 498

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           + YAKCG +  + ++F+ M+ KD +SWNALI  YA +G+G EA++ F+ M+  G ++PD+
Sbjct: 499 STYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANG-VRPDE 557

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            TF  +LSACSHAGL+D+G   F SM  +Y   P  +H +CM+DLLGRAG L+EA  ++ 
Sbjct: 558 VTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQ 617

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
              IQ  +  W AL  AC  H N  L ++ A  L E E  K S YVLLSNI A AG W+E
Sbjct: 618 GMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDE 677

Query: 710 AANIRELLKRTGVIKQPG 727
           +   R  +K  GV K PG
Sbjct: 678 SEKARASIKEKGVNKPPG 695


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 180/525 (34%), Positives = 269/525 (51%), Gaps = 36/525 (6%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +HS +         S+   L+  Y +  +V  A KVF+E      + I  NVM+    
Sbjct: 60  RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPER--NVIIINVMIRSYV 117

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTS 324
           + G   E +  F  M    ++P   TF  V+ AC C     +G ++H  A K G  +   
Sbjct: 118 NNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLF 177

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  ++MY  CG + EA ++   +  +D+VSWN++++ YAQ      A+    EM+SV 
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVK 237

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           I  D  T  SLL +                   ++N    N +   Y K+        +F
Sbjct: 238 ISHDAGTMASLLPA-------------------VSNTTTENVM---YVKD--------MF 267

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +++++WN +I  ++ N  PV+ ++ +S +      PD  +++  L +C   S+L 
Sbjct: 268 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALS 327

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK+IHGY+ +  LI  + L NA+I +YAKCG LD +  VF  M  +D +SW A+ISAY 
Sbjct: 328 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYG 387

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
             G G +AV+ F  MQD G + PD   F   L+ACSHAGL+++G   F  M + Y   P 
Sbjct: 388 FSGRGCDAVALFSKMQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 446

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +HL+CM+DLLGRAG + EA + I    ++     W AL  AC  H N  +G + A  L 
Sbjct: 447 LEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLF 506

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +   ++   YVLLSNIYA AG WEE  NIR ++K  G+ K PG S
Sbjct: 507 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 551



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 240/526 (45%), Gaps = 43/526 (8%)

Query: 98  ILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +L  Y + + L +V  R+ SE    +       + A   +  V  A +VFD++P+R++ +
Sbjct: 49  VLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVII 108

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
            N MI     NG+   GI +F  M    V+ D+Y+F  VL  C  +G +  G+++H   T
Sbjct: 109 INVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSAT 168

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G S  + V N L++MY  CG + +A  V +E      D +S+N ++ G A   R ++A
Sbjct: 169 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVAGYAQNQRFDDA 226

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           L   R+M    +     T  S++ A                    + T+  N    MY  
Sbjct: 227 LEVCREMESVKISHDAGTMASLLPAV-------------------SNTTTEN---VMYVK 264

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
                    +F ++ +K +VSWN MI  Y +  +   A+  Y  M++ G  PD  +  S+
Sbjct: 265 D--------MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSV 316

Query: 396 LASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L + G    + + + IH ++    +I N+ + NALI  YAK   + +A  +F NM  R++
Sbjct: 317 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDV 376

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++W  +I+ +  +G     +  FS++  S L PD       L++C+    L  G+     
Sbjct: 377 VSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 436

Query: 513 VLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGK 570
           +  +  +  ++     M+ L  + G +  + + +  M +E +   W AL+ A   H    
Sbjct: 437 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTD 496

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
             +    A   + ++ P+Q+ +  +LS   + AG  ++ T I + M
Sbjct: 497 IGLL---AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 539



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 169/343 (49%), Gaps = 18/343 (5%)

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
           F  G +L +   ++ +  +H+ +    +  N  +   L+ AYA  + +  A ++F  +  
Sbjct: 44  FMLGQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPE 103

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           RN+I  N +I  ++ NGF  +G+Q F  +    ++PD YT    L +C+   ++  GK+I
Sbjct: 104 RNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKI 163

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           HG   K  L S + +GN ++++Y KCG L  +  V + M  +D +SWN+L++ YAQ+   
Sbjct: 164 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRF 223

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM-VNDYGFIPAEDHL 628
            +A+   + M+ V +I  D  T  ++L A S+       T   + M V D  F   +  L
Sbjct: 224 DDALEVCREMESV-KISHDAGTMASLLPAVSN-------TTTENVMYVKDMFFKMGKKSL 275

Query: 629 ---SCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
              + M+ +  +     EA  +   + +   +  + +  ++  AC     L LG+ I G 
Sbjct: 276 VSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHG- 334

Query: 683 LLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
            +ER++  P++ +   L ++YA  G  + A ++ E +K   V+
Sbjct: 335 YIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVV 377



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 170/416 (40%), Gaps = 77/416 (18%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           +N+ + +   +G Y++ + +F  + S H +KPD Y+    L AC+   N   G ++H  A
Sbjct: 109 INVMIRSYVNNGFYREGIQVFGTMCSCH-VKPDHYTFPCVLKACSCSGNIVIGKKIHGSA 167

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF-------------L 130
            + GL +   V N ++S+Y     L   + V  E+   DV SW +              L
Sbjct: 168 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDAL 227

Query: 131 SACTKMGHVD------------------------YACEVFDKMPDRDLPVYNAMITGCTE 166
             C +M  V                         Y  ++F KM  + L  +N MI    +
Sbjct: 228 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 287

Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSV 225
           N      + L+  M       D  S  SVL  C D   L  G+++H  + +      + +
Sbjct: 288 NAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 347

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
            NALI MY  CG +  A  VFE  K    D +S+  M+      GR  +A+  F  M  +
Sbjct: 348 ENALIDMYAKCGCLDRARDVFENMKSR--DVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405

Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACM 344
            L P  + FV+ ++AC         HA  ++ G   +  +++     Y    +++  ACM
Sbjct: 406 GLVPDSIAFVTTLAAC--------SHAGLLEEGRSCFKLMTD----HYKITPRLEHLACM 453

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFGSLLAS 398
           +       D+              LGR+  +  AY  +Q + + P+E  +G+LL +
Sbjct: 454 V-------DL--------------LGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 68/285 (23%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L+  N+ +    ++    +A+ L+  + +    +PD  S+++ L AC +    + G 
Sbjct: 272 KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEAD-GFEPDAVSITSVLPACGDTSALSLGK 330

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           ++H Y  R  L     + N ++ +Y     L   + VF  +++ DV SWT  +SA     
Sbjct: 331 KIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISA----- 385

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                              Y     GC         + LF +M    +  D+ +F + L+
Sbjct: 386 -------------------YGFSGRGCD-------AVALFSKMQDSGLVPDSIAFVTTLA 419

Query: 198 VCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C  AGLLE GR    L+T                         D  K+    +   C  
Sbjct: 420 ACSHAGLLEEGRSCFKLMT-------------------------DHYKITPRLEHLAC-- 452

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                M+D L   G+V+EA    ++M    + P+E  + +++ AC
Sbjct: 453 -----MVDLLGRAGKVKEAYKFIQEM---PMEPNERVWGALLGAC 489


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 191/634 (30%), Positives = 336/634 (52%), Gaps = 16/634 (2%)

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L   +++  ++ N + +S    +S   K G++  A  +FD   +R +  +  MI   +++
Sbjct: 59  LCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKS 118

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQL---HSLVTKSGFSCLVS 224
                   LF EMH+   + D  ++ ++L+ C+   LE  ++L   H+ + K G      
Sbjct: 119 NRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCND--LEVAKELYQAHAQIVKLGHHLNHR 176

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V N L+  YF  G +  A ++F E  G+  D +S+NVM+ G A+ G  EEA+  F +M  
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCGW--DSVSFNVMITGYANNGLNEEAIELFVEMQN 234

Query: 285 ASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
              +PS+ TF +V+SA +       G Q+H   +K+ F     V NA +  YS    ++E
Sbjct: 235 LGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNE 294

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
              +F  + E D VS+N +I+ YA     + +I  + E+Q        F F ++L   AS
Sbjct: 295 VRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAAS 354

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           S  ++M   +HA V ++    + +VSN+L+  YAK  + ++A +IF  +S R+ + W  +
Sbjct: 355 SLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAM 414

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+  +  G    GL+ F E+  + +  D+ T +  L + A ++S+  GKQ+H  V+++  
Sbjct: 415 ISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF 474

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           ++  S G A++ +YA C  +  +++ F  M E++ ++WNAL+SAYAQ+G+GK  +  F+ 
Sbjct: 475 MNVYS-GCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEE 533

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M   G  +PD  +F  +L+ACSH  LV++G + F+ M   Y   P  +H + M+D L R+
Sbjct: 534 MIMSG-YQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRS 592

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLL 697
           G  DEAE+++     +     W ++ ++C  H N  L R  AG L   +  + +  YV +
Sbjct: 593 GRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTM 652

Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           SNI+A AG W+    +++ ++  GV K P  SW+
Sbjct: 653 SNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWV 686



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 162/562 (28%), Positives = 263/562 (46%), Gaps = 46/562 (8%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +T +  ++     +   S+S  + DA  LF ++H S   +PD  +  T L  C +L  A 
Sbjct: 99  DTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGS-QPDYVTYITLLTGCNDLEVAK 157

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
              Q HA  ++ G      V NT+L  Y     L S +R+F E+   D  S         
Sbjct: 158 ELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVS--------- 208

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                 +N MITG   NG  +  I LF EM  L  +  +++FA+
Sbjct: 209 ----------------------FNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246

Query: 195 VLSVCDAGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           V+S    GL +  FG+Q+H  V K+ F   V V NA +  Y     V +  K+F E    
Sbjct: 247 VISA-SVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPEL 305

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQ 309
             D +SYNV++   A VG+V+E++  F+++   +       F   +S+ ++ L  ++G Q
Sbjct: 306 --DGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQ 363

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HAQ + S  +    VSN+ + MY+ CGK +EA  IF RL  +  V W  MIS   QR L
Sbjct: 364 LHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGL 423

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNA 426
             + +  + EM+   +  D+ TF  +L +S  +  +   + +H+ V  +G + N+    A
Sbjct: 424 HENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFM-NVYSGCA 482

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  YA    IK A + F  MS RN++TWN L++ +  NG     L+ F E++MS  +PD
Sbjct: 483 LLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPD 542

Query: 487 EYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             +    L++C+    +  G K  +      NL  K     AM+    + G  D + ++ 
Sbjct: 543 SVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLM 602

Query: 546 NMM-IEKDTISWNALISAYAQH 566
             M  E D I W +++++   H
Sbjct: 603 GQMPFEPDEIVWTSVLNSCRIH 624



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/486 (25%), Positives = 233/486 (47%), Gaps = 20/486 (4%)

Query: 195 VLSVCDAGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +  + + G L   RQL   +  ++ FS     ++ +I+ Y   GN+  A ++F++     
Sbjct: 50  IKDLSERGQLCQARQLLDQMPNRNSFS-----IDIIISGYVKSGNLTVARRIFDDTDERT 104

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG---YQV 310
              +++  M+   +   R  +A   F +M  +  +P  +T++++++ C    V    YQ 
Sbjct: 105 V--VAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQA 162

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HAQ +K G      V N  +  Y   G +D A  +F  +   D VS+N MI+ YA   L 
Sbjct: 163 HAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLN 222

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             AI  ++EMQ++G +P +FTF +++++S  ++     + IH FV     I N+ V NA 
Sbjct: 223 EEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAF 282

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+K++ + +  ++F+ M   + +++N +I  +   G   + +  F EL  +      
Sbjct: 283 LDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKN 342

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +     LS  A    L+ G+Q+H  V+ +       + N+++ +YAKCG  + + R+F  
Sbjct: 343 FPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLR 402

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  + T+ W A+ISA  Q G  +  +  F  M+    +  DQATF  VL A ++   +  
Sbjct: 403 LSSRSTVPWTAMISANVQRGLHENGLKLFYEMRR-ANVSADQATFACVLKASANLASILL 461

Query: 608 GTRIFDSMVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           G ++   ++   GF+    +  C +LD+      + +A +       +     W AL SA
Sbjct: 462 GKQLHSCVIRS-GFMNV--YSGCALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSA 517

Query: 667 CAAHGN 672
            A +G+
Sbjct: 518 YAQNGD 523



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 133/589 (22%), Positives = 244/589 (41%), Gaps = 118/589 (20%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G  ++++ L L++        N+ +   + +G  ++A+ LFV++ +    KP  ++ +  
Sbjct: 189 GGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNL-GFKPSDFTFAAV 247

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           ++A   L + AFG Q+H + ++        V N  L  Y     +  V+++F+E      
Sbjct: 248 ISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNE------ 301

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                                    MP+ D   YN +IT     G     I LF+E+   
Sbjct: 302 -------------------------MPELDGVSYNVIITAYAWVGKVKESIDLFQELQFT 336

Query: 184 DVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
              R N+ F ++LS+  + L L+ GRQLH+ V  S       V N+L+ MY  CG   +A
Sbjct: 337 TFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEA 396

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
            ++F          + +  M+      G  E  L  F +M  A++   + TF  V+ A  
Sbjct: 397 DRIFLRLSSR--STVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASA 454

Query: 302 --LCPRVGYQVHAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                 +G Q+H+  ++SGF   Y+    A + MY++C  I +A   F  + E+++V+WN
Sbjct: 455 NLASILLGKQLHSCVIRSGFMNVYSGC--ALLDMYANCASIKDAIKTFEEMSERNVVTWN 512

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFINGI 417
            ++S YAQ   G+  + ++ EM   G +PD  +F  +L +     +VE  +  F  ++G+
Sbjct: 513 ALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGV 572

Query: 418 IT---NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
                  +   A++ A  ++ R  +A ++   M                           
Sbjct: 573 YNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMP-------------------------- 606

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
                     PDE   +  L+SC          +IH    KN  +++ + G         
Sbjct: 607 --------FEPDEIVWTSVLNSC----------RIH----KNYALARKAAG--------- 635

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
                   ++FNM + +D   +  + + +A+ G+    V   KAM+D G
Sbjct: 636 --------QLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRG 676


>gi|224121748|ref|XP_002330643.1| predicted protein [Populus trichocarpa]
 gi|222872247|gb|EEF09378.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 194/584 (33%), Positives = 314/584 (53%), Gaps = 30/584 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM- 180
           ++Y  +      +++G  DYA ++F++M  R+    N ++ G       +  + +F+E  
Sbjct: 185 NLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAVEVFKETR 244

Query: 181 HKLDVRRDNYSFASVLSVC------DAGLLEFGRQLHSLVTKSGFS-CLVSVVNALITMY 233
           H +D+  D+Y    +LS C      D G  + GR++H    ++G +   V+V N LI MY
Sbjct: 245 HLVDINVDSYVI--LLSACAEFALLDEGRRK-GREVHGYAIRTGLNDAKVAVGNGLINMY 301

Query: 234 FNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
             CG++  A  VF    G + D   +S+N M+ GL      E+A+  +  M    L PS 
Sbjct: 302 AKCGDIDHARSVF----GLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSN 357

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            T +S +S+C    C  +G Q H + +K G +   SVSN  + +Y+  G + E   +F+ 
Sbjct: 358 FTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSW 417

Query: 349 LQEKDIVSWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EM 404
           + E+D VSWNT+I   A      S AI  +LEM   G  P+  TF +LLA+   +   ++
Sbjct: 418 MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKL 477

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFL 463
              IHA +    +  +  + NAL++ Y K+  ++   +IF  MS R + ++WN++I+G++
Sbjct: 478 SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYI 537

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            N    + +     ++    R D +T +  LS+CA +++L  G ++H   ++  L S + 
Sbjct: 538 HNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLESDVV 597

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           +G+A++ +Y+KCG +D + R FN+M  ++  SWN++IS YA+HG G  A+  F  M+  G
Sbjct: 598 IGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRMKLSG 657

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
           ++ PD  TF  VLSACSH GLVD+G   F SM   YG +P  +H SCM+DLLGRAG LD+
Sbjct: 658 QL-PDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDK 716

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLR---LGRIIAGLLL 684
            +  IN   I+     W  +  AC   GN R   LGR  A +L 
Sbjct: 717 IDNFINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLF 759



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 169/647 (26%), Positives = 304/647 (46%), Gaps = 74/647 (11%)

Query: 55  PDIYSLSTTLAACAN--LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           P+ ++  + + AC    L     G Q+H   L++       + N ++S+Y          
Sbjct: 39  PNRFAFGSAIRACQESMLCGLQLGMQIHGLILKSPYANDASLCNVLISMYGK-------- 90

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                  +G++DYA  VFD++  R+   +N++++  ++ G    
Sbjct: 91  ----------------------YLGYIDYARSVFDEIEIRNSIYWNSIVSVYSQRGDAAS 128

Query: 173 GIGLFREMHKLD----VRRDNYSFASVL----SVCDAGLLEFGRQLHSLVTKSGFSCLVS 224
              LF  M   D    ++ + Y+F S++    S  D+GL   G Q+ + + KSG    + 
Sbjct: 129 CFELFSSMQMADSGLSLKPNEYTFGSLITAACSSVDSGLSLLG-QILARIKKSGLLANLY 187

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFR---- 280
           V +AL   +   G+   A K+FE+      + +S N +M GL      EEA+  F+    
Sbjct: 188 VGSALAGGFSRLGSFDYARKIFEQMTAR--NAVSMNGLMVGLVRQKCGEEAVEVFKETRH 245

Query: 281 --DMLVASLRPSELTFVSVMSACL-------CPRVGYQVHAQAMKSGF-EAYTSVSNAAI 330
             D+ V S       +V ++SAC          R G +VH  A+++G  +A  +V N  I
Sbjct: 246 LVDINVDS-------YVILLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLI 298

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY+ CG ID A  +F  + +KD VSWN+MI+   Q      A+ +Y  M+  G+ P  F
Sbjct: 299 NMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 358

Query: 391 TFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  S L   AS G I + +  H      G+  ++ VSN L++ YA+   + +  ++F  M
Sbjct: 359 TLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVFSWM 418

Query: 448 SPRNIITWNTLINGFLLNGFPV-QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
             R+ ++WNT+I     +G  V + ++ F E++ +   P+  T    L++ + +S+ +  
Sbjct: 419 LERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLS 478

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQ 565
            QIH  +LK N+    ++ NA++  Y K G+++    +F+ M E +D +SWN++IS Y  
Sbjct: 479 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 538

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           +    +A+     M   G+ + D  TF  VLSAC+    ++ G  +    +     + ++
Sbjct: 539 NDLLCKAMDLVWLMMQRGQ-RLDCFTFATVLSACATVATLERGMEVHACAIR--ACLESD 595

Query: 626 DHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             + S ++D+  + G +D A R  N   ++    +W ++ S  A HG
Sbjct: 596 VVIGSALVDMYSKCGRIDYASRFFNLMPMRNLY-SWNSMISGYARHG 641



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 150/564 (26%), Positives = 265/564 (46%), Gaps = 31/564 (5%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL---LE 205
           MPDR+   +  +I+G T+NG  D   G+ +EM       + ++F S +  C   +   L+
Sbjct: 1   MPDRNGVTWACLISGYTQNGMPDDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLCGLQ 60

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMD 264
            G Q+H L+ KS ++   S+ N LI+MY      +D A  VF+E +  + + I +N ++ 
Sbjct: 61  LGMQIHGLILKSPYANDASLCNVLISMYGKYLGYIDYARSVFDEIE--IRNSIYWNSIVS 118

Query: 265 GLASVGRVEEALIRFRDMLVA----SLRPSELTFVSVMSACLCPRVGY------QVHAQA 314
             +  G        F  M +A    SL+P+E TF S+++A  C  V        Q+ A+ 
Sbjct: 119 VYSQRGDAASCFELFSSMQMADSGLSLKPNEYTFGSLITAA-CSSVDSGLSLLGQILARI 177

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
            KSG  A   V +A    +S  G  D A  IF ++  ++ VS N ++    ++  G  A+
Sbjct: 178 KKSGLLANLYVGSALAGGFSRLGSFDYARKIFEQMTARNAVSMNGLMVGLVRQKCGEEAV 237

Query: 375 LAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVE-------MIHAFVFINGI-ITNIQVSN 425
             + E +  V I  D +    LL++     +++        +H +    G+    + V N
Sbjct: 238 EVFKETRHLVDINVDSYVI--LLSACAEFALLDEGRRKGREVHGYAIRTGLNDAKVAVGN 295

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            LI+ YAK   I  A  +F  M  ++ ++WN++I G   N      ++ ++ +  + L P
Sbjct: 296 GLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMP 355

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             +TL  ALSSCA +  +  G+Q HG  +K  L   +S+ N ++ LYA+ G L    +VF
Sbjct: 356 SNFTLISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETGHLAECQKVF 415

Query: 546 NMMIEKDTISWNALISAYAQHGEG-KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           + M+E+D +SWN +I A A  G    EA+  F  M   G   P++ TF  +L+  S    
Sbjct: 416 SWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAG-WSPNRVTFINLLATVSSLST 474

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
                +I  +++  Y         + +L   G++G ++  E + +    +    +W ++ 
Sbjct: 475 SKLSHQI-HALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 533

Query: 665 SACAAHGNLRLGRIIAGLLLEREQ 688
           S    +  L     +  L+++R Q
Sbjct: 534 SGYIHNDLLCKAMDLVWLMMQRGQ 557



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 201/444 (45%), Gaps = 41/444 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L ++  ++DA+  +  +  +  L P  ++L + L++CA+L     G Q H   +
Sbjct: 326 NSMITGLDQNKCFEDAVKSYNSMRKT-GLMPSNFTLISALSSCASLGCILLGQQTHGEGI 384

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG-HVDYAC 143
           + GL     V+NT+L+LY     L   ++VFS +   D  SW T + A    G  V  A 
Sbjct: 385 KLGLDMDVSVSNTLLALYAETGHLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 444

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           EVF +M          M  G + N    I +                  A+V S+  + L
Sbjct: 445 EVFLEM----------MRAGWSPNRVTFINL-----------------LATVSSLSTSKL 477

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
                Q+H+L+ K       ++ NAL+  Y   G + +  ++F        D +S+N M+
Sbjct: 478 ---SHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERR-DEVSWNSMI 533

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
            G      + +A+     M+    R    TF +V+SAC        G +VHA A+++  E
Sbjct: 534 SGYIHNDLLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLERGMEVHACAIRACLE 593

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   + +A + MYS CG+ID A   F  +  +++ SWN+MIS YA+   G +A+  +  M
Sbjct: 594 SDVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGYARHGYGDNALRLFTRM 653

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +  G  PD  TF  +L++   I +V    E   +   + G++  ++  + ++    +   
Sbjct: 654 KLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGE 713

Query: 437 IKQAYQIFHNMSPR-NIITWNTLI 459
           + +     + M  + NI+ W T++
Sbjct: 714 LDKIDNFINKMPIKPNILIWRTVL 737


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 216/714 (30%), Positives = 361/714 (50%), Gaps = 46/714 (6%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L++ +++ H+ DAL LF  +  S +  P+ ++LS+ L +C  L     G Q+H  A++ G
Sbjct: 87  LSSHTKTKHHSDALQLFDMMIGSGEY-PNEFTLSSALRSCFALGEFERGMQIHCSAVKLG 145

Query: 88  LKAYPHVANTILSLY-KNARDLVSVKRVFSEIQN-PDVYSWTTFLSACTKMGHVDYACEV 145
           L+    V  +++  Y K     V   ++ S +++  DV SWTT LS+  + G    A E+
Sbjct: 146 LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEI 205

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-L 204
           + KM                E+G                V  + ++F  +L    + L L
Sbjct: 206 YVKM---------------IESG----------------VYPNEFTFVKLLGAVSSFLGL 234

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
            +G+ LH+ +   G    + +  A++ MY  C  +VDA KV      Y  D   +  ++ 
Sbjct: 235 SYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEY--DVYLWTTLIS 292

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEA 321
           G     +V EA+  FRDM ++ L P+  T+ S++   S+ L   +G Q H++ +  G E 
Sbjct: 293 GFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLED 352

Query: 322 YTSVSNAAITMYSSCGKI-DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              + NA + MY  C  I   A  +F  +   +++ W ++I+ +A++ L  S  L + EM
Sbjct: 353 DLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQL-FAEM 411

Query: 381 QSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q+ G+RP+ FT  ++L A S    +V   M+H  +    +  +I V+NAL+  YA    I
Sbjct: 412 QAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMI 471

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            +A+ +   M+ R+ IT+  L       G     L+    +    ++ DE++L+  LS+ 
Sbjct: 472 DEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAA 531

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + ++  GKQ+H Y +K+      S+ N+++ LY+KCG +  + R F  + E D  SWN
Sbjct: 532 AGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWN 591

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            LIS ++ +G    A+S F  M+  G +KPD  T  +++SACSH GL++ G   F SM  
Sbjct: 592 GLISGFSWNGLISHALSTFDDMRLAG-VKPDSITLLSLISACSHGGLLELGLEYFHSMQK 650

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           +Y   P  DH  C++DLLGR G L+EA  VI     +  S     L +AC  HGN+ LG 
Sbjct: 651 EYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGE 710

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +A   LE +   P++Y+LL+N+Y  AGL +     R L++  G+ + PG  W+
Sbjct: 711 DMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWM 764



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 281/606 (46%), Gaps = 54/606 (8%)

Query: 58  YSLSTTLAACANLRNAAFGNQ--------LHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           +SLS     C  LR  +F N         +H+  ++ GL+   ++ N +LSLY     + 
Sbjct: 9   FSLSRFQETC--LRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVH 66

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
             + +F E+ N DV SWTT LS+ TK  H   A ++FD M                    
Sbjct: 67  RARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMM-------------------- 106

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNA 228
             IG G +          + ++ +S L  C A G  E G Q+H    K G      V  +
Sbjct: 107 --IGSGEY---------PNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTS 155

Query: 229 LITMYFNCGNV-VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           L+  Y  CG   V+A K+    K    D +S+  M+  L   G+  EA   +  M+ + +
Sbjct: 156 LVEFYTKCGCCSVEAWKLLSLVKDG-GDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGV 214

Query: 288 RPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P+E TFV ++ A    L    G  +HA  +  G E    +  A + MYS C ++ +A  
Sbjct: 215 YPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIK 274

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI-- 402
           +     E D+  W T+IS + Q    R AI  + +M+  G+ P+ FT+ SLL +S  I  
Sbjct: 275 VSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILS 334

Query: 403 -EMVEMIHAFVFINGIITNIQVSNALISAYAKNERI-KQAYQIFHNMSPRNIITWNTLIN 460
            ++ E  H+ V I G+  ++ + NAL+  Y K   I   A ++F  ++  N++ W +LI 
Sbjct: 335 LDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIA 394

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           GF          Q F+E+  + +RP+ +T+S  L +C++  SL     +HG+++K  +  
Sbjct: 395 GFAEKRLE-DSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDI 453

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            +++ NA++  YA  G +D +  V   M  +D+I++  L +   Q G    A+     M 
Sbjct: 454 DIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMC 513

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           + G IK D+ +  + LSA +  G ++ G ++    V   GF       + ++ L  + G 
Sbjct: 514 NDG-IKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKS-GFQRCHSVSNSLVHLYSKCGS 571

Query: 641 LDEAER 646
           + +A R
Sbjct: 572 IHDANR 577


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 180/549 (32%), Positives = 306/549 (55%), Gaps = 14/549 (2%)

Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           + +S+L  C     L  G  LH+ V K+G    V + N ++ MY  CG+   A +VF+E 
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
             +  + +S++ M+ G    G  + A+  +  M    L P+E  F SV+SAC       +
Sbjct: 65  --FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTL 119

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G ++H++++K G+E+ + VSN+ I+MY  C +  +A  +F    E + VS+N +I+ + +
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
                  +  +  M+  G+ PD F F  +L      E ++    +H       + +   +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SE 482
            N +I+ Y++   I++A + F  +  +++I+WNTLI          +GL+ F  +   + 
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +RPD++T + AL++CA ++S+ HGKQIH ++++  L   + +GNA++ +YAKCG +  + 
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+ M+  + +SWN +I+ +  HG G+ AV  F+ M   G I+PD  TF  +L+AC+HA
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG-IRPDSVTFIGLLTACNHA 418

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD G   F+SM   YG  P  +H SC++D+LGRAG L+EAE  +             +
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVS 478

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L SA   HG++ +G  +A  LL+ +    S YVLLSN+YA+ G+W+  A  R+ LK +G+
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGL 538

Query: 723 IKQPGCSWI 731
            K+PG S I
Sbjct: 539 KKEPGHSLI 547



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 214/447 (47%), Gaps = 44/447 (9%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +LS+ L  C+  +    G  LHA  L+ G ++   ++N +L++Y         ++VF E+
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              ++ SW+                               AMI+G  + G   + I L+ 
Sbjct: 65  FEKNLVSWS-------------------------------AMISGYDQAGEPQMAIDLYS 93

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M  +    + Y FASV+S C +   +  G+++HS   K G+  +  V N+LI+MY  C 
Sbjct: 94  QMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCN 150

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              DA  VF       C  +SYN ++ G     ++E  L  F+ M    L P    F+ V
Sbjct: 151 QCSDALSVFTNTPEPNC--VSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +  C      + G ++H Q +K   ++   + N  ITMYS    I EA   F  ++EKD+
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS-SGFIEMV--EMIHA 410
           +SWNT+I+  +  +     +  +  M +   +RPD+FTF S LA+ +G   M   + IHA
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +    +  ++ V NAL++ YAK   I  AY IF  M   N+++WNT+I GF  +G   +
Sbjct: 329 HLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGER 388

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSC 497
            ++ F ++  S +RPD  T    L++C
Sbjct: 389 AVELFEQMNASGIRPDSVTFIGLLTAC 415



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 201/440 (45%), Gaps = 55/440 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   ++G  Q A+ L+ Q+     L P+ Y  ++ ++ACA+L     G ++H+ +L+ G
Sbjct: 76  ISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFG 131

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V+N+++S+Y                                K      A  VF 
Sbjct: 132 YESISFVSNSLISMY-------------------------------MKCNQCSDALSVFT 160

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
             P+ +   YNA+ITG  EN   + G+  F+ M +  +  D ++F  VL +C     L+ 
Sbjct: 161 NTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKR 220

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMD 264
           G +LH    K        + N +ITMY     + +A K F   E K    D IS+N ++ 
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK----DVISWNTLIA 276

Query: 265 GLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
             +      + L  F+ M   + +RP + TF S ++AC        G Q+HA  M++   
Sbjct: 277 ACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLY 336

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V NA + MY+ CG I  A  IF+++   ++VSWNT+I+ +    LG  A+  + +M
Sbjct: 337 QDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM 396

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEM-IHAFVFINGIITNIQVSNALISAYAKNER 436
            + GIRPD  TF  LL +   +G ++  ++  ++     GI  +I+  + LI    +  R
Sbjct: 397 NASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGR 456

Query: 437 IKQAYQIFHNMSPRNIITWN 456
           + +A +       R    WN
Sbjct: 457 LNEAEEYM-----RKFPFWN 471



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 64/256 (25%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  S    +   L +F  +     ++PD ++ ++ LAACA L + + G Q+H
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIH 327

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ +R  L     V N ++++Y                                K G + 
Sbjct: 328 AHLMRTRLYQDLGVGNALVNMY-------------------------------AKCGCIG 356

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA ++F KM   +L  +N +I G   +G  +  + LF +M+   +R D+ +F  +L+ C+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AGL++ G+                       +YFN           EE  G   D   +
Sbjct: 417 HAGLVDKGQ-----------------------LYFNS---------MEETYGIAPDIEHF 444

Query: 260 NVMMDGLASVGRVEEA 275
           + ++D L   GR+ EA
Sbjct: 445 SCLIDMLGRAGRLNEA 460


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 210/693 (30%), Positives = 335/693 (48%), Gaps = 50/693 (7%)

Query: 53   LKPDIYSLS---TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
            ++PD +SLS   + L    N R    G Q+H Y LR  L     +   ++ +Y       
Sbjct: 663  VRPDAFSLSIVVSVLCKEGNFRRED-GKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLST 721

Query: 110  SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
               RVF EI++                                ++ ++N MI G   +  
Sbjct: 722  DAWRVFVEIEDKS------------------------------NVVLWNVMIVGFGGSEI 751

Query: 170  EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNA 228
             +  + L+       V+  + SF   L  C       FGRQ+H  V K G      V  +
Sbjct: 752  CESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTS 811

Query: 229  LITMYFNCGNVVDACKVFEEAKGYVCDHI--SYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            L++MY  CG V +A  VF      V D     +N M+           AL  F  M   S
Sbjct: 812  LLSMYSKCGMVGEAETVF----SCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKS 867

Query: 287  LRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
            + P   T  +V+S C    +   G  VHA+  K   ++  ++ +A +T+YS CG   +A 
Sbjct: 868  VLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAY 927

Query: 344  MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLLASSGF 401
            ++F  ++EKD+V+W ++IS   +    + A+  + +M+     ++PD     S++ +   
Sbjct: 928  LVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAG 987

Query: 402  IEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
            +E +     +H  +   G + N+ V ++LI  Y+K    + A ++F +M P NI+ WN++
Sbjct: 988  LEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSM 1047

Query: 459  INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
            I+ +  N  P   ++ F+ +L   + PD  +++  L + +  +SL  GK +HGY L+  +
Sbjct: 1048 ISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI 1107

Query: 519  ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
             S   L NA+I +Y KCG    +  +F  M  K  I+WN +I  Y  HG+ + A+S F  
Sbjct: 1108 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDE 1167

Query: 579  MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
            ++  G   PD  TF +++SAC+H+G V++G   F+ M  DYG  P  +H + M+DLLGRA
Sbjct: 1168 LKKAGET-PDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRA 1226

Query: 639  GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
            G L+EA   I +   +A S  W  L SA   H N+ LG + A  LL  E ++ S YV L 
Sbjct: 1227 GRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLI 1286

Query: 699  NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            N+Y  AGL  EAA +   +K  G+ KQPGCSWI
Sbjct: 1287 NLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWI 1319



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 192/721 (26%), Positives = 350/721 (48%), Gaps = 68/721 (9%)

Query: 24   LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            +N  +  L + G Y  ALHL+ +   S  L   +++  + L AC++L N + G  +H   
Sbjct: 528  VNSGIRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSI 587

Query: 84   LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
            +  G +  P +A +++++Y                                K G +DYA 
Sbjct: 588  IVLGWRYDPFIATSLVNMY-------------------------------VKCGFLDYAV 616

Query: 144  EVFDK-----MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
            +VFD      +  RD+ V N+MI G  +      G+G FR M  L VR D +S + V+SV
Sbjct: 617  QVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSV 676

Query: 199  -CDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C  G    E G+Q+H  + ++       +  ALI MYF  G   DA +VF E +    +
Sbjct: 677  LCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDK-SN 735

Query: 256  HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHA 312
             + +NVM+ G       E +L  +      S++    +F   + AC        G Q+H 
Sbjct: 736  VVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHC 795

Query: 313  QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
              +K G +    VS + ++MYS CG + EA  +F+ + +K +  WN M++ Y + + G S
Sbjct: 796  DVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYS 855

Query: 373  AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
            A+  +  M+   + PD FT  ++++     G  +  + +HA +F   I +   + +AL++
Sbjct: 856  ALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLT 915

Query: 430  AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRPDE 487
             Y+K      AY +F +M  ++++ W +LI+G   NG   + L+ F ++   +  L+PD 
Sbjct: 916  LYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 975

Query: 488  YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
              ++  +++CA + +L  G Q+HG ++K   +  + +G+++I LY+KCG  + +L+VF  
Sbjct: 976  DIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTS 1035

Query: 548  MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
            M  ++ ++WN++IS Y+++   + ++  F  M   G I PD  + T+VL A S    +  
Sbjct: 1036 MRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQG-IFPDSVSITSVLVAISSTASLLK 1094

Query: 608  GTRIFDSMVNDYGF-----IPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARS-DNW 660
            G  +       +G+     IP++ HL + ++D+  + G+   AE +   + +Q +S   W
Sbjct: 1095 GKSL-------HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF--KKMQHKSLITW 1145

Query: 661  WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
              +     +HG+ R    +    L++  + P     LS I A   +G  EE  N  E++K
Sbjct: 1146 NLMIYGYGSHGDCRTALSLFD-ELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMK 1204

Query: 719  R 719
            +
Sbjct: 1205 Q 1205



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 164/603 (27%), Positives = 287/603 (47%), Gaps = 49/603 (8%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N+ +     S   + +L L++ +  S+ +K    S +  L AC+   N+AFG Q+H   +
Sbjct: 740  NVMIVGFGGSEICESSLELYM-LAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVV 798

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            + GL   P+V+ ++LS+Y                               +K G V  A  
Sbjct: 799  KMGLDNDPYVSTSLLSMY-------------------------------SKCGMVGEAET 827

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            VF  + D+ L ++NAM+    EN      + LF  M +  V  D+++ ++V+S C   GL
Sbjct: 828  VFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGL 887

Query: 204  LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             ++G+ +H+ + K       ++ +AL+T+Y  CG   DA  VF+  +    D +++  ++
Sbjct: 888  YDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEK--DMVAWGSLI 945

Query: 264  DGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
             GL   G+ +EAL  F DM     SL+P      SV++AC        G QVH   +K+G
Sbjct: 946  SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTG 1005

Query: 319  FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                  V ++ I +YS CG  + A  +F  ++ ++IV+WN+MIS Y++ NL   +I  + 
Sbjct: 1006 QVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFN 1065

Query: 379  EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
             M S GI PD  +  S+L   +S+  +   + +H +    GI ++  + NALI  Y K  
Sbjct: 1066 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 1125

Query: 436  RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
              K A  IF  M  +++ITWN +I G+  +G     L  F EL  +   PD+ T    +S
Sbjct: 1126 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLIS 1185

Query: 496  SCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDT 553
            +C     +  GK     + ++  I  KM     M+ L  + G L+ +      M  E D+
Sbjct: 1186 ACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADS 1245

Query: 554  ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ-ATFTAVLSACSHAGLVDDGTRIF 612
              W  L+SA   H   +  +    + + + R++P++ +T+  +++    AGL ++  ++ 
Sbjct: 1246 SIWLCLLSASRTHHNVELGI---LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLL 1302

Query: 613  DSM 615
              M
Sbjct: 1303 GEM 1305


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/556 (32%), Positives = 309/556 (55%), Gaps = 28/556 (5%)

Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           + +S+L  C     L  G  LH+ V K+G    V + N ++ MY  CG+   A +VF+E 
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
             +  + +S++ M+ G    G  + A+  +  M    L P+E  F SV+SAC       +
Sbjct: 65  --FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTL 119

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G ++H++++K G+E+ + VSN+ I+MY  C +  +A  +F    E + VS+N +I+ + +
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
                  +  +  M+  G+ PD F F  +L      E ++    +H       + +   +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SE 482
            N +I+ Y++   I++A + F  +  +++I+WNTLI          +GL+ F  +   + 
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETN 299

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +RPD++T + AL++CA ++S+ HGKQIH ++++  L   + +GNA++ +YAKCG +  + 
Sbjct: 300 VRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAY 359

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+ M+  + +SWN +I+ +  HG G+ AV  F+ M   G I+PD  TF  +L+AC+HA
Sbjct: 360 DIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASG-IRPDSVTFIGLLTACNHA 418

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW- 661
           GLVD G   F+SM   YG  P  +H SC++D+LGRAG L+EAE  +       R   +W 
Sbjct: 419 GLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYM-------RKFPFWN 471

Query: 662 ------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
                 +L SA   HG++ +G  +A  LL+ +    S YVLLSN+YA+ G+W+  A  R+
Sbjct: 472 DPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARK 531

Query: 716 LLKRTGVIKQPGCSWI 731
            LK +G+ K+PG S I
Sbjct: 532 RLKGSGLKKEPGHSLI 547



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 214/447 (47%), Gaps = 44/447 (9%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +LS+ L  C+  +    G  LHA  L+ G ++   ++N +L++Y         ++VF E+
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              ++ SW+                               AMI+G  + G   + I L+ 
Sbjct: 65  FEKNLVSWS-------------------------------AMISGYDQAGEPQMAIDLYS 93

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M  +    + Y FASV+S C +   +  G+++HS   K G+  +  V N+LI+MY  C 
Sbjct: 94  QMFLVP---NEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCN 150

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
              DA  VF       C  +SYN ++ G     ++E  L  F+ M    L P    F+ V
Sbjct: 151 QCSDALSVFTNTPEPNC--VSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGV 208

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           +  C      + G ++H Q +K   ++   + N  ITMYS    I EA   F  ++EKD+
Sbjct: 209 LGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDV 268

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS-SGFIEMV--EMIHA 410
           +SWNT+I+  +  +     +  +  M +   +RPD+FTF S LA+ +G   M   + IHA
Sbjct: 269 ISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHA 328

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +    +  ++ V NAL++ YAK   I  AY IF  M   N+++WNT+I GF  +G   +
Sbjct: 329 HLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGER 388

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSC 497
            ++ F ++  S +RPD  T    L++C
Sbjct: 389 AVELFEQMNASGIRPDSVTFIGLLTAC 415



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 201/440 (45%), Gaps = 55/440 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++   ++G  Q A+ L+ Q+     L P+ Y  ++ ++ACA+L     G ++H+ +L+ G
Sbjct: 76  ISGYDQAGEPQMAIDLYSQMF----LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFG 131

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++   V+N+++S+Y                                K      A  VF 
Sbjct: 132 YESISFVSNSLISMY-------------------------------MKCNQCSDALSVFT 160

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
             P+ +   YNA+ITG  EN   + G+  F+ M +  +  D ++F  VL +C     L+ 
Sbjct: 161 NTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKR 220

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMD 264
           G +LH    K        + N +ITMY     + +A K F   E K    D IS+N ++ 
Sbjct: 221 GAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEK----DVISWNTLIA 276

Query: 265 GLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
             +      + L  F+ M   + +RP + TF S ++AC        G Q+HA  M++   
Sbjct: 277 ACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLY 336

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V NA + MY+ CG I  A  IF+++   ++VSWNT+I+ +    LG  A+  + +M
Sbjct: 337 QDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM 396

Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEM-IHAFVFINGIITNIQVSNALISAYAKNER 436
            + GIRPD  TF  LL +   +G ++  ++  ++     GI  +I+  + LI    +  R
Sbjct: 397 NASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGR 456

Query: 437 IKQAYQIFHNMSPRNIITWN 456
           + +A +       R    WN
Sbjct: 457 LNEAEEYM-----RKFPFWN 471



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 64/256 (25%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  S    +   L +F  +     ++PD ++ ++ LAACA L + + G Q+H
Sbjct: 268 VISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIH 327

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ +R  L     V N ++++Y                                K G + 
Sbjct: 328 AHLMRTRLYQDLGVGNALVNMY-------------------------------AKCGCIG 356

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA ++F KM   +L  +N +I G   +G  +  + LF +M+   +R D+ +F  +L+ C+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            AGL++ G+                       +YFN           EE  G   D   +
Sbjct: 417 HAGLVDKGQ-----------------------LYFNS---------MEETYGIAPDIEHF 444

Query: 260 NVMMDGLASVGRVEEA 275
           + ++D L   GR+ EA
Sbjct: 445 SCLIDMLGRAGRLNEA 460


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 193/584 (33%), Positives = 304/584 (52%), Gaps = 80/584 (13%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA- 285
            +L++ Y   G + D+   F+       D + +N M+   A       A+  FR +L + 
Sbjct: 93  TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152

Query: 286 -SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC--- 336
            SLRP + +F S++SA      L      Q+H    K G  A  SVSNA I +Y  C   
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212

Query: 337 GKIDEACMIFARLQEKD-------------------------------IVSWNTMISTYA 365
           G   +A  +   + EKD                                V WN MIS Y 
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA-FVFINGIITN- 420
           Q  +   A   +  M S  I PDEFTF SLL   A++GF    + +H  F+ +       
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332

Query: 421 --IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG-----------F 467
             + V+NAL++ Y+K+ +I  A +IF +M+ +++++WNT+++G++ +G            
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392

Query: 468 P----------VQGLQH----------FSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           P          V G  H          F+++   +++P +YT + A+++C  + +L+HGK
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           Q+H ++++    +  S GNA++T+YA+CG +  +  VF +M   D++SWNA+ISA  QHG
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
            G+EA+  F  M   G I PD+ +F  +L+AC+HAGLVDDG + F+SM  D+G  P EDH
Sbjct: 513 HGREALELFDQMVAQG-IYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDH 571

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
            + ++DLLGRAG + EA  +I +   +     W A+ S C  +G++ LG   A  L +  
Sbjct: 572 YARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMV 631

Query: 688 QDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +    Y+LLSN Y+AAG W +AA +R+L++  GV K+PGCSWI
Sbjct: 632 PEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 675



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 214/471 (45%), Gaps = 59/471 (12%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRNAAFGN--QLHAYALRAGLKAYPHVANTILSLYKN-- 104
           S   L+PD YS ++ L+A   + + A  +  QLH    + G  A   V+N +++LY    
Sbjct: 151 SDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCD 210

Query: 105 ----ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
                RD    ++V  E+   D  +WTT +    + G V  A   F+++      V+NAM
Sbjct: 211 APGVTRD---ARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAM 267

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS--LVTKS 217
           I+G  ++G       LFR M    +  D ++F S+LS C +AG    G+ +H   +  + 
Sbjct: 268 ISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQP 327

Query: 218 GF--SCLVSVVNALITMYFNCGNVVDACKVFEEA------------KGYV---C------ 254
            F     + V NAL+T+Y   G +  A K+F+               GY+   C      
Sbjct: 328 DFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAAR 387

Query: 255 --------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---C 303
                     +S+ VM+ G    G  E+AL  F  M    ++P + T+   ++AC     
Sbjct: 388 IFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGA 447

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
            + G Q+HA  ++ GFEA  S  NA +TMY+ CG + +A ++F  +   D VSWN MIS 
Sbjct: 448 LKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQV 423
             Q   GR A+  + +M + GI PD  +F ++L +     +V+    F +   +  +  +
Sbjct: 508 LGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVD--DGFQYFESMERDFGI 565

Query: 424 SNA------LISAYAKNERIKQAYQIFHNMS--PRNIITWNTLINGFLLNG 466
           S        LI    +  RI +A  +   M   P   I W  +++G  +NG
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAI-WEAILSGCRING 615



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 127/274 (46%), Gaps = 44/274 (16%)

Query: 424 SNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
           + +L+SAYA   R++ +   F ++  + R+ +  N +I+ F         +  F  LL S
Sbjct: 92  ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151

Query: 482 E--LRPDEYTLSVALSSCARISSL--RHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-- 535
           +  LRPD+Y+ +  LS+  ++  L   H  Q+H  V K    + +S+ NA+I LY KC  
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211

Query: 536 -GDLDCSLRVFNMMIEKDTIS-------------------------------WNALISAY 563
            G    + +V + M EKD ++                               WNA+IS Y
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN-DYGFI 622
            Q G   EA   F+ M    RI PD+ TFT++LSAC++AG    G  +    +     F+
Sbjct: 272 VQSGMCAEAFELFRRMVS-KRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFV 330

Query: 623 P--AEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           P  A    + ++ L  ++G +  A ++ +S  ++
Sbjct: 331 PEAALPVNNALVTLYSKSGKIAVATKIFDSMTLK 364


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 212/704 (30%), Positives = 345/704 (49%), Gaps = 45/704 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G YQ+A+ L+ Q+  S +++ + Y+  + L AC+   +   G ++H   +++G    P 
Sbjct: 77  NGCYQEAISLYHQM-LSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPV 135

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V   +LS+Y                                ++G++D A +VF +MP RD
Sbjct: 136 VNTALLSVYG-------------------------------ELGYLDSARKVFGEMPLRD 164

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
           L  ++++I+   ENG  + G+  FR M       D+    +V+  C + G+L   +  H 
Sbjct: 165 LVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHG 224

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + K G      V ++LI MY  CG++  A  VFE          ++  M+      G +
Sbjct: 225 YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTS--TWTAMISSYNLGGYL 282

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA-YTSVSNA 328
           +EAL  F  M    + P+ +T   ++ +C      R G  VH   +K+  +A    +   
Sbjct: 283 KEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPT 342

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + +Y++  K D    I   +  + I  WNT+IS YAQ+ L +  +  ++ MQ  G  PD
Sbjct: 343 LLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            F+  S L    + G +++   IH  V I     +  V N+LI+ Y+K   +  AY IF 
Sbjct: 403 SFSLASSLSASGNEGELQLGLQIHGHV-IKRPFMDEYVFNSLINMYSKCGYVDLAYMIFD 461

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M P+ ++TWN++I+G   NG+  + +  F  + ++     E      + +C+ +  L  
Sbjct: 462 QMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEK 521

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK IH  ++   +   + +  A++ +YAKCGDL  + RVF+ M E+  +SW++LIS+Y  
Sbjct: 522 GKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGV 581

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG+  E +  F  M + G IKP+  T   VLSACSHAG V +G   F+SM  D+G  P  
Sbjct: 582 HGQISEVIFLFSKMLESG-IKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKR 639

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H  C++DLL RAG LDEA  +I        +  W AL + C  H  + + + I   L  
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWN 699

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            + D    Y LLSNIYAA G W E   +R ++K TG+ K P  S
Sbjct: 700 IQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYS 743



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 167/635 (26%), Positives = 290/635 (45%), Gaps = 64/635 (10%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           +L   ++  STTL   A         QLHA+ +   L   P  +  ++  Y    DL S 
Sbjct: 2   RLYMPLFKASTTLRTLA---------QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSS 52

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             VF    +PD + W   L +                       V+N    GC +     
Sbjct: 53  TSVFRTFHSPDSFMWGVLLKS----------------------HVWN----GCYQE---- 82

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
             I L+ +M    ++ ++Y+F SVL  C   G L  G+++H  + KSGF     V  AL+
Sbjct: 83  -AISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALL 141

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           ++Y   G +  A KVF E    + D +S++ ++  +   G + E L  FR M+     P 
Sbjct: 142 SVYGELGYLDSARKVFGEMP--LRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            +  ++V+ AC      R+    H   +K G E    V ++ I MY+ CG +  A ++F 
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFE 259

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-- 405
            +  +   +W  MIS+Y      + A+  ++ MQ   + P+  T   +L S   + ++  
Sbjct: 260 NVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLRE 319

Query: 406 -EMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
            + +H  V  N +  N+  +   L+  YA   +     +I H +  R I  WNTLI+ + 
Sbjct: 320 GKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYA 379

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             G   + +  F  +      PD ++L+ +LS+      L+ G QIHG+V+K   + +  
Sbjct: 380 QKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYV 439

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
             N++I +Y+KCG +D +  +F+ M  K  ++WN++IS  +Q+G   +A+S F  M  V 
Sbjct: 440 F-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMY-VT 497

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSM----VNDYGFIPAEDHLSCMLDLLGRAG 639
             +  +  F +V+ ACSH G ++ G  I   +    V    FI      + ++D+  + G
Sbjct: 498 CPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIE-----TALVDMYAKCG 552

Query: 640 YLDEAERVINSQHIQARS-DNWWALFSACAAHGNL 673
            L  A+RV ++  +  RS  +W +L S+   HG +
Sbjct: 553 DLQTAQRVFDN--MSERSVVSWSSLISSYGVHGQI 585



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 185/389 (47%), Gaps = 15/389 (3%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           ++ +  A    R   Q+HA  + +        S   I  YS  G +  +  +F      D
Sbjct: 4   YMPLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHA 410
              W  ++ ++      + AI  Y +M S  I+ + +TF S+L A SGF  + + + +H 
Sbjct: 64  SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHG 123

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +  +G   +  V+ AL+S Y +   +  A ++F  M  R++++W+++I+  + NG   +
Sbjct: 124 RIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINE 183

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
           GL  F  ++     PD   +   + +C  +  LR  K  HGY+LK  + +   + +++I 
Sbjct: 184 GLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIF 243

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L  +  VF  +  + T +W A+IS+Y   G  KEA++ F +MQ    ++P+  
Sbjct: 244 MYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKT-EVEPNSV 302

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC----MLDLLGRAGYLDEAER 646
           T   +L +C++  L+ +G  +   ++ +      + +L C    +L+L       D  E+
Sbjct: 303 TMRIILRSCTNLSLLREGKSVHCVVIKN----DLDANLDCLGPTLLELYAATAKHDLCEK 358

Query: 647 VINSQHIQARSDNWW-ALFSACAAHGNLR 674
           +++   I  R    W  L S  A  G L+
Sbjct: 359 ILH--EIGGRGIAVWNTLISVYAQKGLLK 385


>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 563

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/594 (32%), Positives = 311/594 (52%), Gaps = 48/594 (8%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L+ +G +  AL L+ ++     +KPD Y+  + + ACA L +   GN +  + L  G   
Sbjct: 8   LTHNGLFSKALDLYFKM-KDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLEIGFGF 66

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
             ++ N ++ +Y    DLV  + VF E+ + D+ SW + +S                   
Sbjct: 67  DLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLIS------------------- 107

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GR 208
                       G + NGY D  + ++ E+    ++ DN++ +SVL  C  GLL    G 
Sbjct: 108 ------------GYSANGYWDEALEIYYELRIAGLKPDNFTLSSVLPAC-GGLLAVKEGE 154

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H LV K G +  V + N L++MYF  G ++DA +VF   K  V D++S+N ++ G   
Sbjct: 155 VIHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQRVFN--KMVVKDYVSWNTLICGYCQ 212

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
           +   EE++  FR+M V   RP  LT  SV+ AC   R    G  VH   ++SG E   + 
Sbjct: 213 MELFEESIQLFREM-VKRFRPDLLTITSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTA 271

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGRSAILAYLEMQSVG 384
           SN  I  Y+ CG +  +   F R++ +D VSWNT+I+ Y Q R+ G    L   +   + 
Sbjct: 272 SNIVIDTYAKCGDLLASRKAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKL--FKKMKMD 329

Query: 385 IRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           ++PD  TF +LL+ S  +   E+ + IH  +   G  +++ VSNAL+  Y+K   +K + 
Sbjct: 330 LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSL 389

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F NM  R+I+TWNT+I   +         +  S++   EL PD  TL   L  C+ I+
Sbjct: 390 KVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIPDMGTLLGILPICSLIA 449

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           + R GK++H    K    S + +GNA+I +Y+KC +L   +RVF  M  KD ++W AL+S
Sbjct: 450 AKRQGKEVHACTFKFGFESTVPVGNALIEMYSKCSNLKYCIRVFEDMKTKDVVTWTALVS 509

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           AY  +GEGK+A+  F  M++ G I PD   F A++ ACSH+G V++G   FD M
Sbjct: 510 AYGMYGEGKKALRAFAEMEEAG-IIPDHIAFVAIIYACSHSGSVEEGLACFDHM 562



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 155/522 (29%), Positives = 262/522 (50%), Gaps = 14/522 (2%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           +N++I   T NG     + L+ +M   +V+ D Y+F SV++ C A G  E G  + + V 
Sbjct: 1   WNSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVL 60

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           + GF   + + NAL+ MY   G++V A  VFEE      D +S+N ++ G ++ G  +EA
Sbjct: 61  EIGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHR--DIVSWNSLISGYSANGYWDEA 118

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  + ++ +A L+P   T  SV+ AC   L  + G  +H    K G      +SN  ++M
Sbjct: 119 LEIYYELRIAGLKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSM 178

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y   G++ +A  +F ++  KD VSWNT+I  Y Q  L   +I  + EM     RPD  T 
Sbjct: 179 YFKFGRLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVK-RFRPDLLTI 237

Query: 393 GSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            S+L + G    +E  + +H ++  +GI  ++  SN +I  YAK   +  + + F  +  
Sbjct: 238 TSVLRACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKC 297

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R+ ++WNTLING++ +    +G++ F ++ M +L+PD  T    LS   R++    GK+I
Sbjct: 298 RDSVSWNTLINGYIQSRSYGEGVKLFKKMKM-DLKPDSITFVTLLSISTRLADTELGKEI 356

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H  + K    S + + NA++ +Y+KCG++  SL+VF  M  +D ++WN +I+A  Q  + 
Sbjct: 357 HCDLAKLGFDSDLVVSNALVDMYSKCGNVKDSLKVFENMKVRDIVTWNTIIAACVQAEDC 416

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
             A      M++   I PD  T   +L  CS       G  +  +    +GF       +
Sbjct: 417 TLAFRMISQMRNEELI-PDMGTLLGILPICSLIAAKRQGKEV-HACTFKFGFESTVPVGN 474

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
            ++++  +   L    RV      +     W AL SA   +G
Sbjct: 475 ALIEMYSKCSNLKYCIRVFEDMKTKDVV-TWTALVSAYGMYG 515


>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
 gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
          Length = 870

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 222/759 (29%), Positives = 369/759 (48%), Gaps = 87/759 (11%)

Query: 25  NISLANLSRSGHYQ-DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           NI L+  + S  Y  + L LF ++H ++  KP   + +  L  CA L +   G  ++ YA
Sbjct: 97  NILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYA 156

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +++GL  +    N ++S+Y                            + C  +    YA 
Sbjct: 157 IKSGLDTHTLAGNALVSMY----------------------------AKCGLVCQDAYA- 187

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
             FD + ++D+  +NA+I+G  EN   +    LF  M K  ++ +  + A++L VC A  
Sbjct: 188 -AFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVC-ASF 245

Query: 204 LE-----FGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
            E     FG+++H  V +       V V NAL++ Y   G V +A  +F   +  + D +
Sbjct: 246 DEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRME--LRDLV 303

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLCPR---VGYQVHAQ 313
           S+N ++ G AS G   +AL  F ++L   +  P  +T + ++ AC   R   VG  +H  
Sbjct: 304 SWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGY 363

Query: 314 AMKSGFEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            ++       TSV NA ++ Y+ C  I+ A   F  +  +D++SWN+M+    +      
Sbjct: 364 VLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTW 423

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITN-----IQVS 424
            +     M S G  PD  T  S++     +   + V+  H++   + ++ +       + 
Sbjct: 424 FLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIG 483

Query: 425 NALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFL-----------LNGFP---- 468
           NA++ AYAK   I+ A ++F ++S  RN++T+  +I+G++            N  P    
Sbjct: 484 NAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLDEAYITFNRMPSSDL 543

Query: 469 ----------------VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
                            Q L  F EL    ++PD  T+   L +CA ++S++  KQ HGY
Sbjct: 544 SVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGY 603

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            ++ +    + L  A+  +YAKCG +  + ++F ++  KD I + A+I  YA HG GKEA
Sbjct: 604 AIR-SCFGDLHLDGALQDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEA 662

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F  M ++G IKPD    T VLSACSHAGLVD+G  IF S+   +G     +  SC++
Sbjct: 663 LGTFFHMIELG-IKPDHVIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVV 721

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLL R G +D+A  ++    I+A ++ W  L  AC  H  + LGR +A  L + E +   
Sbjct: 722 DLLARGGRIDDAFSMVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIG 781

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YV+LSN+YAA   W+    IR+L++   + K  GCSWI
Sbjct: 782 NYVVLSNLYAADARWDGVMEIRKLMRTRDLKKPAGCSWI 820



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/469 (32%), Positives = 249/469 (53%), Gaps = 47/469 (10%)

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLH 211
           L  +N MI+ C  NG               D R+D  + AS+L  C AGL  +++GR LH
Sbjct: 6   LKAWNTMISDC--NG---------------DFRQDYQAVASILKSC-AGLSAIKWGRALH 47

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC---DHISYNVMMDGLAS 268
             + + G     +V  AL+ MY  CG + ++ K+F E     C   D I +N+++ G A 
Sbjct: 48  GSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGS--CNDRDPIFWNILLSGYAG 105

Query: 269 VGRV--EEALIRFRDMLVASL-RPSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFE 320
             RV   E L  FR+M  A+  +PS +T   V+   +C R+     G  V+  A+KSG +
Sbjct: 106 -SRVYDAETLRLFREMHGANYPKPSSVTAAIVLP--VCARLGDVYMGRSVNCYAIKSGLD 162

Query: 321 AYTSVSNAAITMYSSCGKI-DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +T   NA ++MY+ CG +  +A   F  + EKD+VSWN +IS +A+ NL   A   +  
Sbjct: 163 THTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSS 222

Query: 380 MQSVGIRPDEFTFGSLL-ASSGFIEMV-----EMIHAFVFI-NGIITNIQVSNALISAYA 432
           M    I+P+  T  ++L   + F E +     + IH +V   N ++ ++ V NAL+S Y 
Sbjct: 223 MLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYL 282

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLS 491
           +  R+++A  +F  M  R++++WN +I G+  NG   + L+ F ELL +  + PD  TL 
Sbjct: 283 RVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLL 342

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
             + +CA+  +L  GK IHGYVL++ L+ +  S+GNA+++ YAKC D++ +   F M+  
Sbjct: 343 CIIPACAQSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISR 402

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           +D ISWN+++ A  + G     +   + M   G   PD  T  +V+  C
Sbjct: 403 RDLISWNSMLDALVESGYNTWFLELLRWMLSEG-TTPDSVTILSVVHFC 450



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/601 (25%), Positives = 278/601 (46%), Gaps = 84/601 (13%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            + D  ++++ L +CA L    +G  LH   +R G  +   V+  +L++Y     L   K
Sbjct: 20  FRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESK 79

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYED 171
           ++F EI             +C                 DRD   +N +++G      Y+ 
Sbjct: 80  KLFGEI------------GSCN----------------DRDPIFWNILLSGYAGSRVYDA 111

Query: 172 IGIGLFREMHKLDVRR-DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
             + LFREMH  +  +  + + A VL VC   G +  GR ++    KSG        NAL
Sbjct: 112 ETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGNAL 171

Query: 230 ITMYFNCGNVV-DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           ++MY  CG V  DA   F+       D +S+N ++ G A    +E+A   F  ML   ++
Sbjct: 172 VSMYAKCGLVCQDAYAAFDSIDEK--DVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIK 229

Query: 289 PSELTFVSVMSAC------LCPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
           P+  T  +++  C      +    G ++H   ++     A   V NA ++ Y   G+++E
Sbjct: 230 PNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEE 289

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLL---A 397
           A ++F R++ +D+VSWN +I+ YA       A+  + E+ ++  I PD  T   ++   A
Sbjct: 290 AELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACA 349

Query: 398 SSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            S  + + +MIH +V  + ++  +  V NAL+S YAK + I+ AY+ F  +S R++I+WN
Sbjct: 350 QSRNLHVGKMIHGYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWN 409

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++++  + +G+    L+    +L     PD  T+   +  C  +      K+ H Y +++
Sbjct: 410 SMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRH 469

Query: 517 NLIS-----KMSLGNAMITLYAKCGDLDCSLRV--------------------------- 544
            L++     + ++GNA++  YAKCG+++ + +V                           
Sbjct: 470 RLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAIISGYINCGLLD 529

Query: 545 -----FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
                FN M   D   WN ++  YA++    +A+  F  +Q  G IKPD  T  ++L AC
Sbjct: 530 EAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHG-IKPDAVTIMSLLPAC 588

Query: 600 S 600
           +
Sbjct: 589 A 589



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 166/311 (53%), Gaps = 13/311 (4%)

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL---QEKDIVSWNTMI 361
           + G  +H   ++ G  +  +VS A + MY+ CG +DE+  +F  +    ++D + WN ++
Sbjct: 41  KWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCNDRDPIFWNILL 100

Query: 362 STYA-QRNLGRSAILAYLEMQSVGI-RPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           S YA  R      +  + EM      +P   T   +L   A  G + M   ++ +   +G
Sbjct: 101 SGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSG 160

Query: 417 IITNIQVSNALISAYAKNERIKQ-AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           + T+    NAL+S YAK   + Q AY  F ++  +++++WN +I+GF  N       + F
Sbjct: 161 LDTHTLAGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLF 220

Query: 476 SELLMSELRPDEYTLSVALSSCARIS---SLRHGKQIHGYVLKNN-LISKMSLGNAMITL 531
           S +L  +++P+  TL+  L  CA      +   GK+IHGYVL++N L++ + + NA+++ 
Sbjct: 221 SSMLKGQIKPNYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSF 280

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           Y + G ++ +  +F  M  +D +SWNA+I+ YA +GE  +A+  F  +  +  I+PD  T
Sbjct: 281 YLRVGRVEEAELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVT 340

Query: 592 FTAVLSACSHA 602
              ++ AC+ +
Sbjct: 341 LLCIIPACAQS 351



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 201/484 (41%), Gaps = 77/484 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  + +G +  AL LF ++ +   ++PD  +L   + ACA  RN   G  +H
Sbjct: 302 LVSWNAIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIH 361

Query: 81  AYALRAGLKAY-PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            Y LR  L      V N ++S Y    D+      F  I   D+ SW             
Sbjct: 362 GYVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISW------------- 408

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                             N+M+    E+GY    + L R M       D+ +  SV+  C
Sbjct: 409 ------------------NSMLDALVESGYNTWFLELLRWMLSEGTTPDSVTILSVVHFC 450

Query: 200 DAGLLEFG-RQLHSLVTK-----SGFSCLVSVVNALITMYFNCGNVVDACKVFEE----- 248
              L E   ++ HS   +     S F    ++ NA++  Y  CGN+  A KVF+      
Sbjct: 451 VNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENR 510

Query: 249 --------AKGYV-CD-----HISYNVMMDGLASVGRV-----------EEALIRFRDML 283
                     GY+ C      +I++N M     SV  +            +AL  F ++ 
Sbjct: 511 NLVTFKAIISGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQ 570

Query: 284 VASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              ++P  +T +S++ AC      ++  Q H  A++S F     +  A   +Y+ CG I 
Sbjct: 571 AHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIRSCF-GDLHLDGALQDVYAKCGSIG 629

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS-- 398
            A  +F  +  KD++ +  MI  YA   +G+ A+  +  M  +GI+PD     ++L++  
Sbjct: 630 YAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACS 689

Query: 399 -SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITW 455
            +G + E + + ++   ++G+   ++  + ++   A+  RI  A+ +   M    N   W
Sbjct: 690 HAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVTGMPIEANANIW 749

Query: 456 NTLI 459
            TL+
Sbjct: 750 GTLL 753



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 29/389 (7%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  L+  N  L  L  SG+    L L ++   S    PD  ++ + +  C N+      
Sbjct: 401 SRRDLISWNSMLDALVESGYNTWFLEL-LRWMLSEGTTPDSVTILSVVHFCVNVLKEDKV 459

Query: 77  NQLHAYALRAGLKA-----YPHVANTILSLYKNARDLVSVKRVFSEI-QNPDVYSWTTFL 130
            + H+Y++R  L A      P + N IL  Y    ++    +VF  + +N ++ ++   +
Sbjct: 460 KEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLSENRNLVTFKAII 519

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
           S     G +D A   F++MP  DL V+N M+    EN      +GLF E+    ++ D  
Sbjct: 520 SGYINCGLLDEAYITFNRMPSSDLSVWNLMVRLYAENDCSSQALGLFHELQAHGIKPDAV 579

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +  S+L  C +   ++  +Q H    +S F  L  +  AL  +Y  CG++  A K+F+  
Sbjct: 580 TIMSLLPACAEMASVQLIKQCHGYAIRSCFGDL-HLDGALQDVYAKCGSIGYAFKLFQLI 638

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP----- 304
                D I +  M+ G A  G  +EAL  F  M+   ++P  +   +V+SAC        
Sbjct: 639 PNK--DLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVIITTVLSACSHAGLVDE 696

Query: 305 --RVGYQVH-AQAMKSGFEAYTSVSNAAITMYSSCGKIDEA-CMIFARLQEKDIVSWNTM 360
              + Y +     MK   E Y+ V    + + +  G+ID+A  M+     E +   W T+
Sbjct: 697 GLNIFYSIEKVHGMKLTMEQYSCV----VDLLARGGRIDDAFSMVTGMPIEANANIWGTL 752

Query: 361 IS---TYAQRNLGR--SAILAYLEMQSVG 384
           +    T+ +  LGR  +  L  +E +++G
Sbjct: 753 LGACRTHHEVELGRFVADRLFKIEAENIG 781



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           + R D   ++  L SCA +S+++ G+ +HG +++   +S  ++  A++ +YAKCG LD S
Sbjct: 19  DFRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDES 78

Query: 542 LRVFNMM---IEKDTISWNALISAYA-QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            ++F  +    ++D I WN L+S YA       E +  F+ M      KP   T   VL 
Sbjct: 79  KKLFGEIGSCNDRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLP 138

Query: 598 ACSHAGLVDDGTRI 611
            C+  G V  G  +
Sbjct: 139 VCARLGDVYMGRSV 152


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 212/704 (30%), Positives = 345/704 (49%), Gaps = 45/704 (6%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G YQ+A+ L+ Q+  S +++ + Y+  + L AC+   +   G ++H   +++G    P 
Sbjct: 77  NGCYQEAISLYHQM-LSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPV 135

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V   +LS+Y                                ++G++D A +VF +MP RD
Sbjct: 136 VNTALLSVYG-------------------------------ELGYLDSARKVFGEMPLRD 164

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
           L  ++++I+   ENG  + G+  FR M       D+    +V+  C + G+L   +  H 
Sbjct: 165 LVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHG 224

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + K G      V ++LI MY  CG++  A  VFE          ++  M+      G +
Sbjct: 225 YILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTS--TWTAMISSYNLGGYL 282

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA-YTSVSNA 328
           +EAL  F  M    + P+ +T   ++ +C      R G  VH   +K+  +A    +   
Sbjct: 283 KEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPT 342

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + +Y++  K D    I   +  + I  WNT+IS YAQ+ L +  +  ++ MQ  G  PD
Sbjct: 343 LLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            F+  S L    + G +++   IH  V I     +  V N+LI+ Y+K   +  AY IF 
Sbjct: 403 SFSLASSLSASGNEGELQLGLQIHGHV-IKRPFMDEYVFNSLINMYSKCGYVDLAYMIFD 461

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M P+ ++TWN++I+G   NG+  + +  F  + ++     E      + +C+ +  L  
Sbjct: 462 QMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEK 521

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK IH  ++   +   + +  A++ +YAKCGDL  + RVF+ M E+  +SW++LIS+Y  
Sbjct: 522 GKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGV 581

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG+  E +  F  M + G IKP+  T   VLSACSHAG V +G   F+SM  D+G  P  
Sbjct: 582 HGQISEVIFLFSKMLESG-IKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKR 639

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H  C++DLL RAG LDEA  +I        +  W AL + C  H  + + + I   L  
Sbjct: 640 EHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWN 699

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            + D    Y LLSNIYAA G W E   +R ++K TG+ K P  S
Sbjct: 700 IQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYS 743



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 291/639 (45%), Gaps = 72/639 (11%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           +L   ++  STTL   A         QLHA+ +   L   P  +  ++  Y    DL S 
Sbjct: 2   RLYMPLFKASTTLRQLA---------QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSS 52

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
             VF    +PD + W   L +                       V+N    GC +     
Sbjct: 53  TSVFRTFHSPDSFMWGVLLKS----------------------HVWN----GCYQE---- 82

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
             I L+ +M    ++ ++Y+F SVL  C   G L  G+++H  + KSGF     V  AL+
Sbjct: 83  -AISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALL 141

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           ++Y   G +  A KVF E    + D +S++ ++  +   G + E L  FR M+     P 
Sbjct: 142 SVYGELGYLDSARKVFGEMP--LRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPD 199

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            +  ++V+ AC      R+    H   +K G E    V ++ I MY+ CG +  A ++F 
Sbjct: 200 SVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFE 259

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-- 405
            +  +   +W  MIS+Y      + A+  ++ MQ   + P+  T   +L S   + ++  
Sbjct: 260 NVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLRE 319

Query: 406 -EMIHAFVFINGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
            + +H  V  N +  N+  +   L+  YA   +     +I H +  R I  WNTLI+ + 
Sbjct: 320 GKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYA 379

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             G   + +  F  +      PD ++L+ +LS+      L+ G QIHG+V+K   + +  
Sbjct: 380 QKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYV 439

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM---- 579
             N++I +Y+KCG +D +  +F+ M  K  ++WN++IS  +Q+G   +A+S F  M    
Sbjct: 440 F-NSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTC 498

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM----VNDYGFIPAEDHLSCMLDLL 635
            ++G +      F +V+ ACSH G ++ G  I   +    V    FI      + ++D+ 
Sbjct: 499 PEIGEV-----AFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIE-----TALVDMY 548

Query: 636 GRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNL 673
            + G L  A+RV ++  +  RS  +W +L S+   HG +
Sbjct: 549 AKCGDLQTAQRVFDN--MSERSVVSWSSLISSYGVHGQI 585



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 180/374 (48%), Gaps = 15/374 (4%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+HA  + +        S   I  YS  G +  +  +F      D   W  ++ ++    
Sbjct: 19  QLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVWNG 78

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSN 425
             + AI  Y +M S  I+ + +TF S+L A SGF  + + + +H  +  +G   +  V+ 
Sbjct: 79  CYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNT 138

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           AL+S Y +   +  A ++F  M  R++++W+++I+  + NG   +GL  F  ++     P
Sbjct: 139 ALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTP 198

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D   +   + +C  +  LR  K  HGY+LK  + +   + +++I +YAKCG L  +  VF
Sbjct: 199 DSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVF 258

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +  + T +W A+IS+Y   G  KEA++ F +MQ    ++P+  T   +L +C++  L+
Sbjct: 259 ENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKT-EVEPNSVTMRIILRSCTNLSLL 317

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSC----MLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            +G  +   ++ +      + +L C    +L+L       D  E++++   I  R    W
Sbjct: 318 REGKSVHCVVIKN----DLDANLDCLGPTLLELYAATAKHDLCEKILH--EIGGRGIAVW 371

Query: 662 -ALFSACAAHGNLR 674
             L S  A  G L+
Sbjct: 372 NTLISVYAQKGLLK 385



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 131/284 (46%), Gaps = 11/284 (3%)

Query: 395 LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           L  +S  +  +  +HA + +  +  +   S  LI +Y++   ++ +  +F      +   
Sbjct: 7   LFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFM 66

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W  L+   + NG   + +  + ++L  +++ + YT    L +C+    L  G+++HG ++
Sbjct: 67  WGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRII 126

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           K+       +  A++++Y + G LD + +VF  M  +D +SW+++IS+  ++GE  E + 
Sbjct: 127 KSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLD 186

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSC 630
            F+ M   G   PD      V+ AC   G++         I    + +  F+      S 
Sbjct: 187 AFRCMVSEGG-TPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVD-----SS 240

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           ++ +  + G L  AE V  +   ++ S  W A+ S+    G L+
Sbjct: 241 LIFMYAKCGSLRSAEIVFENVTYRSTS-TWTAMISSYNLGGYLK 283


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 179/482 (37%), Positives = 272/482 (56%), Gaps = 8/482 (1%)

Query: 258 SYNVMMDGLASVGRVEEALIRFR-DMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           ++N+M+ GL +  +     I F   M    +RP+  T+  V  AC   L    G   H+ 
Sbjct: 92  AFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSG 151

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            +KSG  A   V ++ ITMYS CG++  A  +F  + EKD+VSWN+MIS Y++      A
Sbjct: 152 VLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDA 211

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISA 430
           +  + EM+  G  PDE T  S+L + G +  + +   I  FV  N +  N  V +ALI  
Sbjct: 212 VGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGM 271

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   +  A ++F  M  ++++TWN +I G+  NG   + +  FS +  S + PD+ TL
Sbjct: 272 YGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITL 331

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              LS+CA I +L  GK +  Y  +  L + + +  A+I +YAKCG LD +LRVF  M +
Sbjct: 332 VGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQ 391

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           K+ +SWNA+ISA A HG  +E++S FK M ++ G ++P+  +F  VLSAC HAGLVD+G 
Sbjct: 392 KNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGR 451

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           ++FD M + +G +P  +H SCM+DLL RAG++ EA   I     +       AL  AC  
Sbjct: 452 QLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQK 511

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
             N+ +   +  +LLE E      Y++ S I+A    W+++A +R L+++ GV K PGCS
Sbjct: 512 RRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCS 571

Query: 730 WI 731
           WI
Sbjct: 572 WI 573



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 188/410 (45%), Gaps = 47/410 (11%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+ ++      ACANL     G   H+  L++GL A  HV ++++++Y    +L   +
Sbjct: 122 IRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCAR 181

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF EI   D+ SW + +S  ++M                               GY   
Sbjct: 182 RVFDEISEKDLVSWNSMISGYSRM-------------------------------GYAGD 210

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +GLF EM       D  +  S+L  C D G L  G  +   V ++       V +ALI 
Sbjct: 211 AVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIG 270

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG++  A +VF+       D +++N M+ G A  G  +EA+I F  M  + + P +
Sbjct: 271 MYGKCGDLSSARRVFDRMVKK--DVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDK 328

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T V V+SAC        G  +   A + G +    VS A I MY+ CG +D+A  +F  
Sbjct: 329 ITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFED 388

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLAS---SGFIE 403
           + +K+ VSWN MIS  A     + ++  +  M   G  +RP++ +F  +L++   +G ++
Sbjct: 389 MPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVD 448

Query: 404 MVEMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
             E    F  ++   G++  I+  + ++   A+   + +A+     M  +
Sbjct: 449 --EGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEK 496


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 202/647 (31%), Positives = 321/647 (49%), Gaps = 76/647 (11%)

Query: 122 DVYSWTTFLSACTKMG--HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           D ++ +  L   T++   +++ + ++F  + + +  + N M+ G  +       I +++ 
Sbjct: 57  DSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKF 116

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M + +V  DNY++  +   C   L EF G+ +   V K GF   V + N LI MY  CGN
Sbjct: 117 MLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN 176

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA KVF+ +   V D +S+N M+ G   VG VEEA   +  M                
Sbjct: 177 LSDARKVFDGSS--VLDMVSWNSMLAGYVLVGNVEEAKDVYDRM---------------- 218

Query: 299 SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                P               E     SN+ I ++   G ++EAC +F  +++KD+VSW+
Sbjct: 219 -----P---------------ERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWS 258

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFIN 415
            +IS Y Q  +   A++ + EM + GI  DE    S+L++   + +V   +++H  V   
Sbjct: 259 ALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKV 318

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-----------LL 464
           GI T + + NALI  Y+  E +  A ++F      + I+WN++I+G+           L 
Sbjct: 319 GIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALF 378

Query: 465 NGFP--------------------VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           +  P                     + L  F E+ +   +PDE  L   +S+C  +++L 
Sbjct: 379 DSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALD 438

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            GK IH Y+ KN L   + LG  +I +Y K G ++ +L VF  + EK   +WNALI   A
Sbjct: 439 QGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLA 498

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            +G   +++  F  M++ G + P++ TF AVL AC H GLVD+G R F+SM+ ++   P 
Sbjct: 499 MNGLVDKSLKTFSEMKEHG-VTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPN 557

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H  CM+DLLGRAG L EAE +I S  +      W AL  AC  +G+   G  I   L+
Sbjct: 558 IKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV 617

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E   D     VLLSNIYA+ G W +   +R ++++ GV+K PGCS I
Sbjct: 618 ELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMI 664



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 232/511 (45%), Gaps = 73/511 (14%)

Query: 56  DIYSLSTTLAACANLRNAAF-GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           D Y+      +C+ +R A F G  +  + L+ G  +  ++ NT++++Y    +L   ++V
Sbjct: 125 DNYTYPILFQSCS-IRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKV 183

Query: 115 FSEIQNPDVYSWTTFLSACT-------------------------------KMGHVDYAC 143
           F      D+ SW + L+                                  K G+V+ AC
Sbjct: 184 FDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEAC 243

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           ++F++M  +DL  ++A+I+   +N   +  + LF+EM+   +  D     SVLS C   L
Sbjct: 244 KLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLL 303

Query: 204 LEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA------------K 250
           +   G+ +H LV K G    V++ NALI MY +C  VV A K+F E+             
Sbjct: 304 VVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMIS 363

Query: 251 GYV-C----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           GYV C                D++S++ M+ G A   R  E L+ F++M +   +P E  
Sbjct: 364 GYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETI 423

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            VSV+SAC        G  +HA   K+G +    +    I MY   G +++A  +F  L+
Sbjct: 424 LVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLE 483

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIH- 409
           EK + +WN +I   A   L   ++  + EM+  G+ P+E TF ++L +   + +V+  H 
Sbjct: 484 EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHR 543

Query: 410 ---AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLN 465
              + +  + I  NI+    ++    +   +K+A ++  +M    ++ TW  L+      
Sbjct: 544 HFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKY 603

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           G    G +   +L+  EL PD    +V LS+
Sbjct: 604 GDNETGERIGRKLV--ELHPDHDGFNVLLSN 632



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 181/367 (49%), Gaps = 42/367 (11%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y++AL LF +++++  +  ++  LS  L+AC+ L     G  +H   ++ G++ Y ++ N
Sbjct: 270 YEEALILFKEMNANGIMVDEVVVLSV-LSACSRLLVVITGKLVHGLVVKVGIETYVNLQN 328

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ +Y +  ++V+ +++FSE    D  SW + +S   K G ++ A  +FD MPD+D   
Sbjct: 329 ALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS 388

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
           ++AMI+G  +       + LF+EM     + D     SV+S C     L+ G+ +H+ + 
Sbjct: 389 WSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIR 448

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVE 273
           K+G    + +   LI MY   G V DA +VF+  E KG      ++N ++ GLA  G V+
Sbjct: 449 KNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVS----TWNALILGLAMNGLVD 504

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           ++L  F +M    + P+E+TFV+V+ AC         H   +  G   + S         
Sbjct: 505 KSLKTFSEMKEHGVTPNEITFVAVLGACR--------HMGLVDEGHRHFNS--------- 547

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVGIRPDEFT 391
                     MI       +I  +  M+       LGR+ +L   E  ++S+ + PD  T
Sbjct: 548 ----------MIQEHKIGPNIKHYGCMVDL-----LGRAGMLKEAEELIESMPMAPDVST 592

Query: 392 FGSLLAS 398
           +G+LL +
Sbjct: 593 WGALLGA 599


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 212/668 (31%), Positives = 333/668 (49%), Gaps = 45/668 (6%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLV--SVKRVFSEIQNP--DVYSWTTFLS 131
           G  LHA+AL++G  ++  V+N++++ Y +   L   +   VF++I     DV SW + L+
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
             +               P   L  + +M++  T          +    H         +
Sbjct: 91  PLSH------------HRPLAALSHFRSMLSSST----------ILPSPHSFAAAFTAAA 128

Query: 192 FASVLSVCDAGLLEFGRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
            A   S            +H+L  K    S  V V  AL+ MY   G + DA  VF+E  
Sbjct: 129 RAHSASAGAV--------VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMP 180

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCP---RV 306
               + +S+  M+ G A+    +EA   FR ML    L  +E    +V+SA   P    +
Sbjct: 181 HR--NEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPM 238

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G QVH   +K G   + SV N+ +TMY+  G +D A  +F   +E++ ++W+ MI+ Y+Q
Sbjct: 239 GVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQ 298

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQV 423
                SA+  + +M + G  P EFT  G L A S    ++E    H  +   G    + V
Sbjct: 299 NGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYV 358

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            +AL+  YAK   I  A + F+  S  +I+ W  ++ G + NG   Q L  ++ +    +
Sbjct: 359 KSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGV 418

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P+  T++  L +CA +++L  GKQ+H  +LK       S+G+A+ T+Y+KCG+L+  + 
Sbjct: 419 FPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMV 478

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           VF  M  +D I+WN++IS ++Q+G G +A++ F+ M+  G   PD  TF  VL ACSH G
Sbjct: 479 VFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEG-TAPDPVTFINVLCACSHMG 537

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LVD G   F SM+ DYG  P  DH +CM+D+L RAG L EA+  I S  I   +  W  +
Sbjct: 538 LVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIV 597

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
             AC +  +  +G      L++      + Y+LLSNIYAA   W +   +R L+K  GV 
Sbjct: 598 LGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVS 657

Query: 724 KQPGCSWI 731
           K PGCSW+
Sbjct: 658 KDPGCSWV 665



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 211/433 (48%), Gaps = 27/433 (6%)

Query: 290 SELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK--IDEACMIFA 347
           S   F+  +     PR G  +HA A+KSG  ++  VSN+ IT YSS  +  +  A  +FA
Sbjct: 14  SHTQFIEHLRRASRPRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFA 73

Query: 348 RLQ--EKDIVSWNTMISTYA-QRNLGRSAILAYLE--MQSVGIRPDEFT---FGSLLASS 399
            +    +D+ SWN++++  +  R L   A L++    + S  I P   +     +  A +
Sbjct: 74  DIPAAARDVASWNSLLNPLSHHRPL---AALSHFRSMLSSSTILPSPHSFAAAFTAAARA 130

Query: 400 GFIEMVEMIHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
                  ++HA    +    +N+ VS AL++ Y K   I  A  +F  M  RN ++W  +
Sbjct: 131 HSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAM 190

Query: 459 INGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           + G+       +  + F ++L    L  +E+  +  LS+ +    L  G Q+HG V+K+ 
Sbjct: 191 VAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDG 250

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           ++  +S+ N+++T+YAK G +D +  VF    E+++I+W+A+I+ Y+Q+G  + AV  F 
Sbjct: 251 MVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFS 310

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G   P + T   VL+ACS  G + +G +    MV   GF       S ++D+  +
Sbjct: 311 QMHAAG-FPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVK-LGFEVQVYVKSALVDMYAK 368

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK----PSV 693
            G + +A+   N Q  +     W A+ +     G+++ G     L+L    DK    P+ 
Sbjct: 369 CGCIGDAKECFN-QFSELDIVLWTAMVT-----GHVQNGEFEQALMLYARMDKEGVFPNT 422

Query: 694 YVLLSNIYAAAGL 706
             + S + A AGL
Sbjct: 423 LTITSLLRACAGL 435



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 151/338 (44%), Gaps = 57/338 (16%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   S++G+ + A+ +F Q+H++    P  ++L   L AC+++     G Q H   ++ G
Sbjct: 293 ITGYSQNGNAESAVRMFSQMHAA-GFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLG 351

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   +V + ++ +Y     +   K  F++    D+  WT                    
Sbjct: 352 FEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWT-------------------- 391

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
                      AM+TG  +NG  +  + L+  M K  V  +  +  S+L  C AGL  LE
Sbjct: 392 -----------AMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRAC-AGLAALE 439

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+QLH+ + K GF    SV +AL TMY  CGN+ D   VF        D I++N ++ G
Sbjct: 440 PGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHR--DVIAWNSIISG 497

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            +  GR  +A+  F +M +    P  +TF++V+ AC         H   +  G+  + S+
Sbjct: 498 FSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCAC--------SHMGLVDRGWTYFRSM 549

Query: 326 SNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMIS 362
               I  Y    ++D  ACM+       DI+S   M+S
Sbjct: 550 ----IKDYGLTPRLDHYACMV-------DILSRAGMLS 576



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 17/205 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G ++ AL L+ ++     + P+  ++++ L ACA L     G QLH   L+ G     
Sbjct: 399 QNGEFEQALMLYARM-DKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGA 457

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM--- 149
            V + + ++Y    +L     VF  + + DV +W + +S  ++ G  + A  +F++M   
Sbjct: 458 SVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLE 517

Query: 150 ---PDRDLPV-YNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDA 201
              PD   PV +  ++  C+  G  D G   FR M K   L  R D+Y+    +LS   A
Sbjct: 518 GTAPD---PVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILS--RA 572

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVV 226
           G+L   +     +T    +CL  +V
Sbjct: 573 GMLSEAKDFIESITIDHGTCLWRIV 597


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/622 (30%), Positives = 318/622 (51%), Gaps = 26/622 (4%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  LS    +G +  A  VFD  P  D   Y  M+    +       + L ++M +   R
Sbjct: 68  TKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRR---R 124

Query: 187 R------DNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           R      D++  +  L  C    D G   +G +LH    K G +    V+N+L+ MY   
Sbjct: 125 RPCPEAQDDFVLSLALKACIRSADYG---YGTRLHCDAVKVGGADGF-VMNSLVDMYAKA 180

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G++  A KVFE   G   + +S+  M+ G    G   + L+ F  M   ++ PSE T  +
Sbjct: 181 GDLECARKVFERIPGR--NVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIAT 238

Query: 297 VMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V++AC   +    G  +H   +K G  + + +S A + MY  CG++++A  +F  L   D
Sbjct: 239 VITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELEDAQCVFDELSYID 298

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHA 410
           +V W TMI  Y Q      A+  +L+ +   I P+  T  ++L++S  +  + +   IH 
Sbjct: 299 LVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHG 358

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                G++    V NAL+  YAK + + +A +IF ++S ++++ WN++++G+  N     
Sbjct: 359 IAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCND 418

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F ++ +    PD  ++  ALS+   +  L  GK  HGY +K+  +S + +  A++ 
Sbjct: 419 ALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSNIYVSTALLN 478

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LY KCGDL  + RVF+ M ++++++W A+I  Y   G+   ++  F  M   G + P+  
Sbjct: 479 LYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDG-VHPNDV 537

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            FT++LS CSH G+V    R FDSM   +   P+  H +CM+D+L RAG L+EA   I++
Sbjct: 538 AFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALEFIDN 597

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             +QA +  W A    C  H  L+ G      ++    ++P +YVL+SN+Y + G+WE++
Sbjct: 598 MPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLISNLYTSNGMWEKS 657

Query: 711 ANIRELLKRTGVIKQPGCSWIG 732
             IR  ++  G++K PG S IG
Sbjct: 658 QAIRRWMQEKGLVKLPGYSSIG 679



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 267/545 (48%), Gaps = 49/545 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D + LS  L AC    +  +G +LH  A++ G  A   V N+++ +Y  A DL   ++V 
Sbjct: 132 DDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKV- 189

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                                         F+++P R++  + +M++GC +NG+   G+ 
Sbjct: 190 ------------------------------FERIPGRNVVSWTSMLSGCVQNGFAADGLL 219

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF +M + +V    Y+ A+V++ C A + L  GR +H  V K G      +  AL+ MY 
Sbjct: 220 LFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYV 279

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG + DA  VF+E   Y+ D + +  M+ G    G   +AL  F D   A++ P+ +T 
Sbjct: 280 KCGELEDAQCVFDELS-YI-DLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTI 337

Query: 295 VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+SA    R   +G  +H  A+K G   YT V NA + MY+ C  + EA  IF  +  
Sbjct: 338 ATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISN 397

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMI 408
           KD+V+WN+M+S YA+ N+   A++ + +M   G  PD  +    L++S   G + + +  
Sbjct: 398 KDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSF 457

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H +   +  ++NI VS AL++ Y K   +  A ++F  M+ RN +TW  +I G+ + G  
Sbjct: 458 HGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDS 517

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNA 527
              +  F E+L   + P++   +  LS+C+    +   K+    + ++ N+   M     
Sbjct: 518 AGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYAC 577

Query: 528 MITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGE---GKEAVSCFKAMQDVG 583
           M+ + A+ G+L+ +L  + NM ++ DT  W A +     H     G+EA+   K M  + 
Sbjct: 578 MVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAI---KRMMVLH 634

Query: 584 RIKPD 588
             +PD
Sbjct: 635 PERPD 639



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 206/478 (43%), Gaps = 54/478 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+   ++G   D L LF ++   + + P  Y+++T + AC+ L     G  +H   ++ G
Sbjct: 205 LSGCVQNGFAADGLLLFNKMRQDN-VPPSEYTIATVITACSALIGLHQGRWMHGSVIKQG 263

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L +   ++  +L +Y    +L   + VF E+   D+  WTT                   
Sbjct: 264 LMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTT------------------- 304

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
                       MI G T+NG     + LF +    ++  ++ + A+VLS   A L  L 
Sbjct: 305 ------------MIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSA-SAQLRDLS 351

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +H +  K G      VVNAL+ MY  C  V +A ++F        D +++N M+ G
Sbjct: 352 LGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNK--DVVAWNSMLSG 409

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAY 322
            A      +AL+ F+ M +    P  ++ V  +SA +C     +G   H  A+K  F + 
Sbjct: 410 YAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN 469

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             VS A + +Y+ CG +  A  +F  + +++ V+W  MI  Y  +     +I  + EM  
Sbjct: 470 IYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLK 529

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS----NALISAYAKNERIK 438
            G+ P++  F S+L++     MV     +        NI  S      ++   A+   ++
Sbjct: 530 DGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLE 589

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE------LLMSELRPDEYTL 490
           +A +   NM     +  +T + G  L+G  +     F E      +++   RPD Y L
Sbjct: 590 EALEFIDNMP----MQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVL 643



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 137/348 (39%), Gaps = 82/348 (23%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S + ++  N  L+  + +    DAL LF Q+ S     PD  S+   L+A   L +   G
Sbjct: 396 SNKDVVAWNSMLSGYAENNMCNDALMLFKQM-SLKGPSPDAISVVHALSASVCLGDLLIG 454

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
              H YA++    +  +V+  +L+LY    DL S +RVF                     
Sbjct: 455 KSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVF--------------------- 493

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                     D+M DR+   + AMI G    G     I LF EM K  V  ++ +F S+L
Sbjct: 494 ----------DEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSIL 543

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           S C   G++   ++                       YF+  ++     +    K Y C 
Sbjct: 544 STCSHTGMVTAAKR-----------------------YFD--SMAQHFNITPSMKHYAC- 577

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQVHAQA 314
                 M+D LA  G +EEAL    +M    ++     + + +  C L  R+  Q   +A
Sbjct: 578 ------MVDVLARAGNLEEALEFIDNM---PMQADTSVWGAFLHGCELHSRL--QFGEEA 626

Query: 315 MKSGF-------EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           +K          + Y  +SN    +Y+S G  +++  I   +QEK +V
Sbjct: 627 IKRMMVLHPERPDLYVLISN----LYTSNGMWEKSQAIRRWMQEKGLV 670



 Score = 48.9 bits (115), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 26/225 (11%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNN---LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           L SC  + SLR    +H  +L +    L+  +     +++ YA  GDL  +  VF+    
Sbjct: 36  LPSCGTLPSLR---VLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPR 92

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP-----DQATFTAVLSACSHAGLV 605
            D  S+  ++    Q     EAV+     QD+ R +P     D    +  L AC  +   
Sbjct: 93  PDAYSYGVMLWCLVQAERHAEAVALH---QDMRRRRPCPEAQDDFVLSLALKACIRSADY 149

Query: 606 DDGTRIFDSMVN---DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWW 661
             GTR+    V      GF+     ++ ++D+  +AG L+ A +V   + I  R+  +W 
Sbjct: 150 GYGTRLHCDAVKVGGADGFV-----MNSLVDMYAKAGDLECARKVF--ERIPGRNVVSWT 202

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           ++ S C  +G    G ++    + ++   PS Y + + I A + L
Sbjct: 203 SMLSGCVQNGFAADGLLLFN-KMRQDNVPPSEYTIATVITACSAL 246


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 208/671 (30%), Positives = 343/671 (51%), Gaps = 24/671 (3%)

Query: 81  AYALRAGLKAY-PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------AC 133
           A A R G  +Y P  A  +L   ++A  L  V+R+ + +     +  T   +      A 
Sbjct: 45  ATAPRRGCSSYGPREAVALLLRLQSAPALTEVRRLHAALLVRGYHRSTVLAAQLVRAYAR 104

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSF 192
            + G + +A  VFD MP R+   +NA+I G  + G     +  + +M     V  D +++
Sbjct: 105 MRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTY 164

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCL----VSVVNALITMYFNCGNVVDACKVFE 247
             VL  C A G +E GR++   V       +    V V  AL+ M+  CG + +A  +FE
Sbjct: 165 PPVLKACAALGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFE 224

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP--- 304
                V D  S+  M+ G    G   E +   + M     RP  + F +V+ AC      
Sbjct: 225 SMG--VRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKEL 282

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R G  +H  A+K G      V NA + MY  C ++D A  +F  +  KD+ SW+T+I+ +
Sbjct: 283 RTGMALHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGH 342

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNI 421
           +Q  +   ++  + EM + GI+P+  T  S+L S   + ++   + IH F   N +  + 
Sbjct: 343 SQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSE 402

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRN-IITWNTLINGFLLNGFPVQGLQHFSELLM 480
            +++ALI  Y +   I+ A QI     P+N ++  N++I G+++N      L+    LL 
Sbjct: 403 FLASALIDFYCRQGYIRDA-QIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLK 461

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             LRPD  T+   L  C + S L  GK++H Y +++N+ S  S+ NA+  +Y KCG L+ 
Sbjct: 462 EGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEI 521

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + ++F +M E++T+++N LIS+  +HG   +A   F  M+  G + PD+ TF A+LS CS
Sbjct: 522 ANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDG-VSPDKVTFVALLSCCS 580

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H GL+D G   +DSM+ DY   P ++H SC++DL  R+G LD+A   I +       D  
Sbjct: 581 HGGLIDKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVL 640

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
             L SAC  H  + +  ++A  + E+  + P  ++LLSN+YA+AG+W E   IR +++  
Sbjct: 641 GCLLSACRDHHRMDIAELVAERIFEQNPNDPGYHILLSNVYASAGMWSEVTRIRTMIEER 700

Query: 721 GVIKQPGCSWI 731
            + K+ G S I
Sbjct: 701 SLKKRTGNSLI 711



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 194/426 (45%), Gaps = 48/426 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G + + + L  ++  S   +PD    +T + AC  ++    G  LH YA++ G+    
Sbjct: 243 RGGDWLEVMTLLKRM-KSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDI 301

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++ +Y     L     +F  I + DV+SW+T                        
Sbjct: 302 CVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWST------------------------ 337

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLH 211
                  +I G ++N   ++ + LF EM    ++ ++ + AS+L S+ +  LL +G+++H
Sbjct: 338 -------IIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIH 390

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-EAKGYVCDHISYNVMMDGLASVG 270
               ++       + +ALI  Y   G + DA  VFE + K    D +  N M+ G     
Sbjct: 391 CFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKN---DLVVLNSMIRGYVVNK 447

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
             E AL   R +L   LRP  +T VSV+  C  P     G ++HA A++    +  SV+N
Sbjct: 448 DSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTN 507

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A   MY  CG ++ A  IF  + E++ V++NT+IS+  +      A + +  M+  G+ P
Sbjct: 508 ALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSP 567

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS------NALISAYAKNERIKQAY 441
           D+ TF +LL+      +++      F + ++ +  +       + ++  Y+++ ++  A+
Sbjct: 568 DKVTFVALLSCCSHGGLID--KGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAW 625

Query: 442 QIFHNM 447
               N+
Sbjct: 626 SFIANL 631


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 193/635 (30%), Positives = 328/635 (51%), Gaps = 11/635 (1%)

Query: 105 ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC 164
           A  +   +++F E+   +  S    +S   K  ++  A E+F+ M  R+   +  MI G 
Sbjct: 59  ANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGY 118

Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLV 223
           ++N        L+ EM +  V+ D+ +FA++LS   D   L+   Q+HS + + GFS  +
Sbjct: 119 SQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASL 178

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
            V N+L+  Y     +  A ++F E      D +S+NVM+ G    G  EEAL  F  M 
Sbjct: 179 IVFNSLVDSYCKTCCLDIASQLFSEMP--TKDSVSFNVMITGYTKYGFREEALKLFMQMR 236

Query: 284 VASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
               +PS  TF +++   +       G Q+H  A+K+ +     V+NA +  YS    ID
Sbjct: 237 NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
            A  +F  + E D VS+N +I+ YA       +   +  +Q        F F ++L+ + 
Sbjct: 297 LAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAA 356

Query: 401 F---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
               + M    HA   +   ++ +QV NAL+  YAK E+ + A +IF N++ RN + W  
Sbjct: 357 IELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTA 416

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I+ ++  GF  + L+ F E+    +  D+ T +  L + A ++S+  GKQ+H  V++  
Sbjct: 417 IISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLG 476

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L+S +  G+ ++ +YA CG +  ++ VF  M +++ + WNALISAY+Q+G+ +   S F 
Sbjct: 477 LLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFA 536

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M + G + PD  +F +VL+ACSH GLV+     F+SM   Y   P   H + M+D+L R
Sbjct: 537 DMIESG-LYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCR 595

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK-PSVYVL 696
           +G  +EAE +I+    +     W ++ ++C  H N  L +  A  L + +  +  + YV 
Sbjct: 596 SGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVN 655

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SNIYA AG WE AA +++ ++  GV K    SW+
Sbjct: 656 MSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWV 690



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 136/557 (24%), Positives = 253/557 (45%), Gaps = 57/557 (10%)

Query: 26  ISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           I +   S++   ++A +L+ ++  S  +KPD  + +T L+   +        Q+H++ +R
Sbjct: 113 IMIGGYSQNNQPKEAFNLYTEMCRS-GVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIR 171

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
            G  A   V N+++  Y     L    ++FSE+   D  S+   ++  TK          
Sbjct: 172 FGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKY--------- 222

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SVCDAGL 203
                                 G+ +  + LF +M  +D +   ++FA++L  SV    +
Sbjct: 223 ----------------------GFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDV 260

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           + FG+Q+H L  K+ +   + V NAL+  Y     +  A  +F+E      D +SYN+++
Sbjct: 261 I-FGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPE--LDGVSYNIII 317

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
            G A  G+ E++   F+ +   S       F +++S     L   +G Q HAQA+ +   
Sbjct: 318 TGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAV 377

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V NA + MY+ C K ++A  IFA L  ++ V W  +IS Y Q+     A+  + EM
Sbjct: 378 SEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEM 437

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
               +  D+ TF S L +S  +  V +   +H+ V   G+++++   + L+  YA    +
Sbjct: 438 NRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSM 497

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           K A ++F  M  RNI+ WN LI+ +  NG        F++++ S L PD  +    L++C
Sbjct: 498 KDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTAC 557

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN--------MMI 549
           +      H   +   +   N ++++   +     YA   D+ C    FN        M  
Sbjct: 558 S------HRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPF 611

Query: 550 EKDTISWNALISAYAQH 566
           E D + W++++++   H
Sbjct: 612 EPDEVMWSSVLNSCRIH 628



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 161/370 (43%), Gaps = 47/370 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI +   + +G Y+ +  LF ++  +   + + +  +T L+  A   N + G Q HA A+
Sbjct: 314 NIIITGYAWNGQYEKSFDLFKRLQGTSFDRKN-FPFATMLSVAAIELNLSMGRQTHAQAV 372

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
                +   V N ++ +Y          R+F+ +   +   WT                 
Sbjct: 373 VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWT----------------- 415

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                         A+I+   + G+ +  + +F+EM++ +V  D  +FAS L    +   
Sbjct: 416 --------------AIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLAS 461

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHISYNV 261
           +  G+QLHS V + G    V   + L+ MY NCG++ DA +VF+E   +  VC    +N 
Sbjct: 462 VSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVC----WNA 517

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKS 317
           ++   +  G  E     F DM+ + L P  ++F+SV++AC    L  +  +  ++     
Sbjct: 518 LISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVY 577

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQRNLGRSA 373
             +         I +    G+ +EA  + + +  E D V W++++++   +  ++L + A
Sbjct: 578 KLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKA 637

Query: 374 ILAYLEMQSV 383
                +M ++
Sbjct: 638 ADQLFKMDAL 647


>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 608

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 191/569 (33%), Positives = 311/569 (54%), Gaps = 19/569 (3%)

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALIT 231
           I +    H  ++   +  +AS+L  C   +  F  G Q H+ V KSG     +V N+L++
Sbjct: 45  IRILNSTHSSEISAKSNLYASLLQTCRK-VFSFIHGLQFHAHVVKSGLETDRNVGNSLLS 103

Query: 232 MYFNCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           +YF  G ++ +  +VF+    +V D IS+  MM G  +     +AL  F +M+   L+P+
Sbjct: 104 LYFKLGPDMRETRRVFDGM--FVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPN 161

Query: 291 ELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           + T  S + AC      R+G   H   +  GFE    +S+    MY    +  +A  +F 
Sbjct: 162 KFTLSSAVKACFELGEVRLGRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFD 221

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            + E D++ W  ++S +++ +L   A+ L Y   +  G+ PD  TFG++L + G +  ++
Sbjct: 222 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 281

Query: 407 M---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               IH  +  NGI +N+ V ++L+  Y K+  +++A Q+F+ M  +NI++W+ L+ G+ 
Sbjct: 282 QGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYC 341

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NG   + ++ F E+   +L    Y     L +CA ++++R GK+IHG  ++      + 
Sbjct: 342 QNGEHEKAIEMFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 397

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A+I LY K G +D + RV++ M  ++ I+WNA++SA AQ+G G+EAVS F  M   G
Sbjct: 398 VESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 457

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            IKPD  +F AVL+AC H GLV++G   F  M   YG  P  +H SCM+DLLGRAG  +E
Sbjct: 458 -IKPDYISFIAVLTACGHTGLVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 516

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNL-RLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           AE +++    +  +  W  L   CAA+ +   +   IA  ++E E      YVLLSN+Y 
Sbjct: 517 AENLLDRAECRNDASLWGVLLGPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYK 576

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A G   +A  IR+L+ R GV K  G SWI
Sbjct: 577 AIGRHGDALKIRKLMVRRGVAKTVGQSWI 605



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 217/487 (44%), Gaps = 49/487 (10%)

Query: 31  LSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           L + G   DA+ +    HSS    K ++Y+  + L  C  + +   G Q HA+ +++GL+
Sbjct: 35  LCKLGQLTDAIRILNSTHSSEISAKSNLYA--SLLQTCRKVFSFIHGLQFHAHVVKSGLE 92

Query: 90  AYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
              +V N++LSLY K   D+   +RVF  +   D  SWT+ +S          A EV   
Sbjct: 93  TDRNVGNSLLSLYFKLGPDMRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEV--- 149

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
                                       F EM    ++ + ++ +S +  C + G +  G
Sbjct: 150 ----------------------------FVEMVSFGLQPNKFTLSSAVKACFELGEVRLG 181

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R  H +V   GF     + + L  MY      VDA +VF+E      D I +  ++   +
Sbjct: 182 RCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMP--EPDVICWTAVLSAFS 239

Query: 268 SVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
                EEAL  F  M     L P   TF +V++AC   R    G ++H + + +G  +  
Sbjct: 240 KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV 299

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V ++ + MY   G + EA  +F  +  K+IVSW+ ++  Y Q      AI  + EM+  
Sbjct: 300 VVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREME-- 357

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
               D + FG++L +   +  V +   IH      G   N+ V +ALI  Y K+  I  A
Sbjct: 358 --EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYA 415

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +++  MS RN+ITWN +++    NG   + +  F++++   ++PD  +    L++C   
Sbjct: 416 SRVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHT 475

Query: 501 SSLRHGK 507
             +  G+
Sbjct: 476 GLVEEGR 482



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 40/276 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+  S++  Y++AL LF  +H    L PD  +  T L AC NLR    G ++H   +  G
Sbjct: 235 LSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNG 294

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           + +   V +++L +Y  +  +   ++VF+ +   ++ SW+  L    + G  + A E+F 
Sbjct: 295 IGSNVVVESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFR 354

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
           +M ++DL  +  ++  C                                    AGL  + 
Sbjct: 355 EMEEKDLYCFGTVLKAC------------------------------------AGLAAVR 378

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+++H    + G    V V +ALI +Y   G +  A +V+  +K  V + I++N M+  
Sbjct: 379 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVY--SKMSVRNMITWNAMLSA 436

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           LA  GR EEA+  F DM+   ++P  ++F++V++AC
Sbjct: 437 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTAC 472


>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/482 (36%), Positives = 269/482 (55%), Gaps = 9/482 (1%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           I   +M+ G  S      A + F +M+   L P+  T  SV+ AC    C   G  VH  
Sbjct: 59  IGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGL 118

Query: 314 AMKSGFEAYTSVSNAAITMYSSCG-KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           A+K G + +  V NA + MY++C   +D+ACM+F  +  K+ VSW T+I+ Y  R+ G  
Sbjct: 119 AIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYG 178

Query: 373 AILAYLEM--QSVGIRPDEFTFGSLLASS-GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
            +  + +M  + V + P  F+      +S G     E +HA V  +G  +N+ V N+++ 
Sbjct: 179 GLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILD 238

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y +     +A + F+ M+ R++ITWNTLI G+  +  P + L  FS +      P+ +T
Sbjct: 239 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESLYVFSMMESEGFSPNCFT 297

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            +  +++CA ++ L  G+QIHG +++  L   ++L NA+I +Y+KCG++  S +VF  M 
Sbjct: 298 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 357

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            +D +SW A++  Y  HG G+EAV  F  M   G I+PD+  F A+LSACSHAGLVD+G 
Sbjct: 358 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSG-IRPDRVVFMAILSACSHAGLVDEGL 416

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R F  MV DY   P ++   C++DLLGRAG ++EA  +I S   +     W     AC A
Sbjct: 417 RYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKA 476

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H    LG++ A  +L+        YV+LSNIYAA G W E A +R+L+KR G  K+ G S
Sbjct: 477 HTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRS 536

Query: 730 WI 731
           W+
Sbjct: 537 WV 538



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 197/401 (49%), Gaps = 13/401 (3%)

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           +F EM   ++  + ++ +SVL  C     L +GR +H L  K G    + V NAL+ MY 
Sbjct: 80  VFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYA 139

Query: 235 NCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            C  ++ DAC VF     ++ + +S+  ++ G          L  FR ML+  +  +  +
Sbjct: 140 TCCVSMDDACMVFRGI--HLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFS 197

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F   + AC        G Q+HA   K GFE+   V N+ + MY  C    EA   F  + 
Sbjct: 198 FSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMN 257

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
           ++D+++WNT+I+ Y + N   S +  +  M+S G  P+ FTF S++A+     F+   + 
Sbjct: 258 QRDLITWNTLIAGYERSNPTES-LYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQ 316

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH  +   G+  N+ +SNALI  Y+K   I  ++Q+F  MS R++++W  ++ G+  +G+
Sbjct: 317 IHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGY 376

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGN 526
             + ++ F +++ S +RPD       LS+C+    +  G +    ++ + N+     +  
Sbjct: 377 GEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYG 436

Query: 527 AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
            ++ L  + G ++ +  +  +M  + D   W   + A   H
Sbjct: 437 CVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAH 477



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 224/480 (46%), Gaps = 49/480 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +   ++  A  +F ++  + +L P+ +++S+ L AC  ++  ++G  +H  A++ G
Sbjct: 65  IAGYTSCNNHTHAWMVFCEM-MNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L  + +V N ++ +Y                            + C  M   D AC VF 
Sbjct: 124 LDGFIYVDNALMDMYA---------------------------TCCVSM---DDACMVFR 153

Query: 148 KMPDRDLPVYNAMITGCT--ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLL 204
            +  ++   +  +I G T  ++GY   G+ +FR+M   +V  + +SF+  +  C + G  
Sbjct: 154 GIHLKNEVSWTTLIAGYTHRDDGYG--GLRVFRQMLLEEVELNPFSFSIAVRACTSIGSH 211

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
            FG QLH+ VTK GF   + V+N+++ MY  C    +A + F E      D I++N ++ 
Sbjct: 212 TFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQR--DLITWNTLIA 269

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEA 321
           G        E+L  F  M      P+  TF S+M+AC        G Q+H + ++ G + 
Sbjct: 270 GYER-SNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDG 328

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             ++SNA I MYS CG I ++  +F  +  +D+VSW  M+  Y     G  A+  + +M 
Sbjct: 329 NLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMV 388

Query: 382 SVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFING---IITNIQVSNALISAYAKNERI 437
             GIRPD   F ++L++     +V E +  F  + G   I  + ++   ++    +  ++
Sbjct: 389 RSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKV 448

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++AY++  +M  + +   W   +     + FP  G      +L  +LRP      V LS+
Sbjct: 449 EEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRIL--DLRPHMAGTYVMLSN 506



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 10/166 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A   RS +  ++L++F  +  S    P+ ++ ++ +AACA L     G Q+H
Sbjct: 261 LITWNTLIAGYERS-NPTESLYVF-SMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 318

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +R GL     ++N ++ +Y    ++    +VF  +   D+ SWT  +      G+ +
Sbjct: 319 GRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGE 378

Query: 141 YACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
            A E+FDKM      PDR   V+ A+++ C+  G  D G+  F+ M
Sbjct: 379 EAVELFDKMVRSGIRPDR--VVFMAILSACSHAGLVDEGLRYFKLM 422


>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
          Length = 643

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 190/667 (28%), Positives = 342/667 (51%), Gaps = 75/667 (11%)

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
            FG  +H Y  ++GL     VA+++  +Y                               
Sbjct: 1   GFGRGVHGYVAKSGLDDCVFVASSLADMY------------------------------- 29

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G +D A +VFD++P+R++  +NA++ G  +NG  +  I L  +M +  V     + +
Sbjct: 30  GKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVS 89

Query: 194 SVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           + LS   + G +E G+  H+L   +G      +  +++  Y   G +  A  VF+   G 
Sbjct: 90  TCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFDRMIGK 149

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQ 309
             D +++N+++ G    G VE+A+   + M +  L+   +T  ++MS        ++G +
Sbjct: 150 --DVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKE 207

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           V    ++  FE+   +++AA+ MY+ CG I +A  +F    +KD++ WNT+++ YA+  L
Sbjct: 208 VQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGL 267

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
              A+  + EMQ   + P+  T+                                N +I 
Sbjct: 268 SGEALRLFYEMQLESVPPNVITW--------------------------------NLIIL 295

Query: 430 AYAKNERIKQAYQIFHNMSPR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +  +N ++ +A ++F  M        I++W T++NG + NG   + + +  ++  S +RP
Sbjct: 296 SLLRNGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRP 355

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRV 544
           + ++++VALS+CA ++SL  G+ +HGY+++N L  S +S+  +++ +YAKCGD+  + +V
Sbjct: 356 NVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKV 415

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F   +  +   +NA+ISAYA +G  +EA++ + +++D+G IKPD  TFT +LSAC+HAG 
Sbjct: 416 FRRKLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMG-IKPDNITFTNILSACNHAGD 474

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           ++    IF  MV+ +G  P  +H   M+DLL  AG  ++A R++     +  +    +L 
Sbjct: 475 INQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLL 534

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           + C       L   ++  LLE E D    YV +SN YA  G W+E   +RE++K  G+ K
Sbjct: 535 ATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLKK 594

Query: 725 QPGCSWI 731
           QPGCSWI
Sbjct: 595 QPGCSWI 601



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/526 (22%), Positives = 223/526 (42%), Gaps = 76/526 (14%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  ++A+ L   +     ++P   ++ST L+A AN+     G   HA A+  GL+   
Sbjct: 62  QNGMNEEAIRLMCDMRE-EGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDN 120

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +  +IL+ Y                                K+G +DYA  VFD+M  +
Sbjct: 121 ILGTSILNFY-------------------------------CKVGLIDYAEMVFDRMIGK 149

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           D+  +N +I+G  + G  +  I + + M    ++ D  + ++++S        + G+++ 
Sbjct: 150 DVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQ 209

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               +  F   + + +A + MY  CG++VDA KVF+       D I +N ++   A  G 
Sbjct: 210 CYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQK--DLILWNTLLAAYAESGL 267

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
             EAL  F +M + S+ P+ +T+                                N  I 
Sbjct: 268 SGEALRLFYEMQLESVPPNVITW--------------------------------NLIIL 295

Query: 332 MYSSCGKIDEACMIFARLQEK----DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
                G++DEA  +F ++Q       IVSW TM++          AI    +MQ  G+RP
Sbjct: 296 SLLRNGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRP 355

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQI 443
           + F+    L++   +  +     +H ++  N +  +++ +  +L+  YAK   I +A ++
Sbjct: 356 NVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKV 415

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F       +  +N +I+ + L G   + +  +  L    ++PD  T +  LS+C     +
Sbjct: 416 FRRKLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDI 475

Query: 504 RHGKQIHG-YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
               +I    V K+ +   +     M+ L A  G+ + +LR+   M
Sbjct: 476 NQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEM 521



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 189/448 (42%), Gaps = 75/448 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+ +  Q+    KLK D  +LST ++  A  +N+  G ++  Y +
Sbjct: 155 NLLISGYVQQGLVEDAIRM-CQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCI 213

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R   ++   +A+  + +Y     +V  K+VF      D+  W T L+A            
Sbjct: 214 RHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALR 273

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDRDL-PV---YNAMITGCT 165
                                    + G VD A E+F +M    + P    +  M+ G  
Sbjct: 274 LFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLV 333

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLV 223
            NG  +  I   R+M +  +R + +S    LS C +   L FGR +H  + ++   S  V
Sbjct: 334 XNGCSEEAIHYLRKMQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSV 393

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A KVF   +    +   YN M+   A  G VEEA+  +  + 
Sbjct: 394 SIETSLVDMYAKCGDISKAEKVFR--RKLFSELPLYNAMISAYALYGNVEEAMALYGSLE 451

Query: 284 VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AIT 331
              ++P  +TF +++SAC         HA  +    E ++ + +              + 
Sbjct: 452 DMGIKPDNITFTNILSAC--------NHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVD 503

Query: 332 MYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE- 389
           + +S G+ ++A  +   +  E D     ++++T  + +  ++ ++ YL  Q +   PD  
Sbjct: 504 LLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEH--KTELVEYLSKQLLESEPDNS 561

Query: 390 ---FTFGSLLASSG----FIEMVEMIHA 410
               T  +  A  G     ++M EM+ A
Sbjct: 562 GNYVTISNAYAGEGSWDEVVKMREMMKA 589


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 208/702 (29%), Positives = 352/702 (50%), Gaps = 53/702 (7%)

Query: 44  FVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH---VANTILS 100
           F  +  S  + P+ ++     ++ A+      G  LHA A + G   +P    V ++ +S
Sbjct: 96  FYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGF--FPENSAVGSSFVS 153

Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           LY                            S C +M     A +VFD++P RD+  + A+
Sbjct: 154 LY----------------------------SRCDEMND---AVKVFDEIPVRDVVAWTAL 182

Query: 161 ITGCTENGYEDIGIGLFREMHKL--DVRRDNYSF--ASVLSVCDAGLLEFGRQLHSLVTK 216
           + G  +NG  ++G+    EM+++  D ++ N        L+  + G L  GR LH LV K
Sbjct: 183 VIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVK 242

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           +G  CL+ + +++++MY  CG   +A + F E      D +S+  M+   A  G + + +
Sbjct: 243 NGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINK--DLLSWTSMIRVYARFGMMSDCV 300

Query: 277 IRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F +ML   + P  +    ++S     +    G   H   ++  +     V N+ ++MY
Sbjct: 301 RFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMY 360

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
              G +  A  +F R Q   I  WN MI  Y +       I  + EMQ +GIR +     
Sbjct: 361 CKFGMLSFAERLFQRSQ-GSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIV 419

Query: 394 SLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           S +AS G +  + +   IH  V    +   I V+N+LI  Y K +++  +++IF N S R
Sbjct: 420 SAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIF-NRSER 478

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           ++I WN LI+  +      + +  F  ++M +  P+  TL V LS+C+ ++ L  G+++H
Sbjct: 479 DVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLH 538

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
            Y+ +      + LG A++ +YAKCG L+ S  VF+ M+EKD I WNA+IS Y  +G  +
Sbjct: 539 RYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAE 598

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            A+  F  M++   +KP++ TF ++LSAC+HAGLV++G  +F  M   Y   P   H +C
Sbjct: 599 SAIEIFNLMEE-SNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTC 656

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLLGR+  L+EAE ++ S  I      W AL SAC  H  + +G  I    ++ E + 
Sbjct: 657 MVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPEN 716

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLK-RTGVIKQPGCSWI 731
              Y++++N+Y++ G W+EA N+R  +K R  + K+ G S +
Sbjct: 717 DGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/473 (22%), Positives = 220/473 (46%), Gaps = 29/473 (6%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
            H++   +G S    +   LI++Y    +   +  +F        D   +N  +  L S 
Sbjct: 30  FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLP--FKDTFLWNSFLKTLFSR 87

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGF-EAYTSV 325
               + L  +  M   ++ P+  TF  V S+    +  R G  +HA A K GF    ++V
Sbjct: 88  SLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAV 147

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG- 384
            ++ +++YS C ++++A  +F  +  +D+V+W  ++  Y Q       +    EM  VG 
Sbjct: 148 GSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGD 207

Query: 385 --IRPDEFTF-GSLLASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
              +P+  T  G  LA     ++V    +H  V  NGI   + + ++++S Y K    ++
Sbjct: 208 DSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPRE 267

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           AYQ F  +  +++++W ++I  +   G     ++ F E+L +++ PD   +   LS    
Sbjct: 268 AYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGN 327

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNA 558
              +  GK  HG +++ +      + N+++++Y K G L  + R+F     + +I  WN 
Sbjct: 328 SVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR--SQGSIEYWNF 385

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I  Y + G+  + +  F+ MQ +G I+ +     + +++C   G ++ G  I  +++  
Sbjct: 386 MIVGYGRIGKNVKCIQLFREMQYLG-IRSESVGIVSAIASCGQLGEINLGRSIHCNVIK- 443

Query: 619 YGFIPAEDHLS-CMLDLLGRAGYLDEAERVINSQHIQARSDN----WWALFSA 666
            GF+     ++  ++++ G+   ++ + R+ N      RS+     W AL SA
Sbjct: 444 -GFVDETISVTNSLIEMYGKCDKMNVSWRIFN------RSERDVILWNALISA 489



 Score = 62.4 bits (150), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 5/157 (3%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           HY++A+ LF  I       P+  +L   L+AC++L     G +LH Y    G K    + 
Sbjct: 495 HYEEAISLF-DIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLG 553

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
             ++ +Y     L   + VF  +   DV  W   +S     G+ + A E+F+ M + ++ 
Sbjct: 554 TALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVK 613

Query: 156 ----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
                + ++++ C   G  + G  +F +M    V+ +
Sbjct: 614 PNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPN 650


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 194/645 (30%), Positives = 319/645 (49%), Gaps = 40/645 (6%)

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +AN I+ +Y   +     ++VF  I+  + +SW+  +            C V + M    
Sbjct: 4   LANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVE-----------CYVQNAMYQEA 52

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHS 212
           L VY                    +EM + ++  D Y+ +SVL+ C   L +E GR +  
Sbjct: 53  LEVY--------------------KEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQR 92

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
              + GF   V V  +LI ++  CG + +A  VF  + G + D IS   M+      G+ 
Sbjct: 93  KAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFR-SMGAMRDIISVTAMIGAYVRHGKN 151

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAA 329
           + AL  +  M    L P   T+ +++ AC  P     G  +H   ++S      SV NA 
Sbjct: 152 DLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNAL 211

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           ITMY+ CG + ++  +F  +  KD+VSWN MI+ Y      + A   +  M ++G  PD 
Sbjct: 212 ITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDI 271

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           +TF S+L   AS   +E   M+H  +   G   +  + N LIS + +   ++ A + F++
Sbjct: 272 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYS 331

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +  + +  WNT++  +         L  +  +L+    PD +T S  + SCA + +LR G
Sbjct: 332 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 391

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K IH           + LG A++ +YAKCG L  + + F+ +  KD +SW+A+I+A AQH
Sbjct: 392 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 451

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G  +EA+     M   G I  ++ T ++VL ACSH G + +G   F  +  D+G    E+
Sbjct: 452 GHAEEALELSHLMNLQG-IAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEE 510

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           +    +DLLGRAG+L EAE V+++   +        L   C  HG++R G+ +   ++  
Sbjct: 511 NTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVAL 570

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           E + P  YVLL+N+YAAAG W++ A +R  +++ GV +Q GCS I
Sbjct: 571 EPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSI 615



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 222/478 (46%), Gaps = 42/478 (8%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           YQ+AL ++ ++    ++  D Y+LS+ LAAC  L +   G  +   A   G +    VA 
Sbjct: 49  YQEALEVYKEM-VRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVAT 107

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD-RDLP 155
           +++ L+                                K G ++ A  VF  M   RD+ 
Sbjct: 108 SLIHLF-------------------------------AKCGCLEEAESVFRSMGAMRDII 136

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
              AMI     +G  D+ +  + +M    +  D +++A++L  C +   L  G+ +H  +
Sbjct: 137 SVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHI 196

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            +S     +SV NALITMY  CG++ D+  +F      V D +S+N M+      G  ++
Sbjct: 197 LESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMD--VKDVVSWNAMIAAYTLYGHDKD 254

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAIT 331
           A   F  M      P   TF S++ AC  P+    G  +H +    GF+   ++ N  I+
Sbjct: 255 AFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLIS 314

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           M++ CG ++ A   F  +++K++ +WNTM++ YAQ + G+ A+  Y  M   G  PD FT
Sbjct: 315 MFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFT 374

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           F S++   AS G +   + IH      G   ++ +  AL++ YAK   +  A + F  +S
Sbjct: 375 FSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGIS 434

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
            +++++W+ +I     +G   + L+    + +  +  +E T S  L +C+    L  G
Sbjct: 435 NKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEG 492



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 177/343 (51%), Gaps = 8/343 (2%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           T ++N  I MY  C   ++A  +F R+++++  SW+ ++  Y Q  + + A+  Y EM  
Sbjct: 2   TFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVR 61

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             I  D +T  S+LA+   +  VE   M+       G   ++ V+ +LI  +AK   +++
Sbjct: 62  KEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEE 121

Query: 440 AYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           A  +F +M   R+II+   +I  ++ +G     L  + ++    L PD +T +  L +C+
Sbjct: 122 AESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACS 181

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
               L  GK IH ++L++     +S+ NA+IT+YAKCG L  S  +F  M  KD +SWNA
Sbjct: 182 SPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNA 241

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I+AY  +G  K+A S F  M  +G   PD  TF+++L AC+    ++DG R+    +  
Sbjct: 242 MIAAYTLYGHDKDAFSLFHRMCTLGHT-PDIYTFSSILGACASPKRLEDG-RMLHVRITA 299

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GF       + ++ +  R G L+ A R   S  I+ +    W
Sbjct: 300 RGFDRDFAMQNNLISMFTRCGSLESARRYFYS--IEKKELGAW 340



 Score =  135 bits (340), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 43/443 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G    AL  + ++ S   L+PD ++ +  L AC++      G  +H + L +      
Sbjct: 147 RHGKNDLALDTYWKMRS-QGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNI 205

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y     L   K +F  +   DV SW   ++A T  GH   A  +F +M   
Sbjct: 206 SVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRM--- 262

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                      CT     DI                 Y+F+S+L  C     LE GR LH
Sbjct: 263 -----------CTLGHTPDI-----------------YTFSSILGACASPKRLEDGRMLH 294

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
             +T  GF    ++ N LI+M+  CG++  A + F   +       ++N M+   A   +
Sbjct: 295 VRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELG--AWNTMLAAYAQFDK 352

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
            ++AL  +++ML+    P   TF SV+ +C      R G  +H  +   GFE    +  A
Sbjct: 353 GKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTA 412

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG + +A   F  +  KD+VSW+ MI+  AQ      A+     M   GI  +
Sbjct: 413 LVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQN 472

Query: 389 EFTFGSLL-ASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIF 444
           E T  S+L A S    + E I  F+ ++   GI  + + +   I    +   +K+A  + 
Sbjct: 473 EVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVL 532

Query: 445 HNMSPR-NIITWNTLINGFLLNG 466
           H M  + + +   TL+ G  ++G
Sbjct: 533 HTMPFKVSFVALVTLLGGCKVHG 555



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 45/300 (15%)

Query: 12  GNSNTSKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHS-SHKLKPDIYSLST 62
           G+   SK L L +++         +A  +  GH +DA  LF ++ +  H   PDIY+ S+
Sbjct: 219 GSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHT--PDIYTFSS 276

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            L ACA+ +    G  LH      G      + N ++S++     L S +R F  I+  +
Sbjct: 277 ILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKE 336

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           + +W T L+A  +          FDK  D      N ++ G T                 
Sbjct: 337 LGAWNTMLAAYAQ----------FDKGKDALFLYKNMLLEGFTP---------------- 370

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                D ++F+SV+  C + G L  G+ +H   T  GF   V +  AL+ MY  CG++ D
Sbjct: 371 -----DRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLAD 425

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A K F+       D +S++ M+   A  G  EEAL     M +  +  +E+T  SV+ AC
Sbjct: 426 AKKSFDGISNK--DVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHAC 483



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 8/218 (3%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L   N  LA  ++    +DAL L+  +       PD ++ S+ + +CA+L     G 
Sbjct: 334 KKELGAWNTMLAAYAQFDKGKDALFLYKNM-LLEGFTPDRFTFSSVVDSCASLGALREGK 392

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H  +   G +    +   ++++Y     L   K+ F  I N DV SW+  ++A  + G
Sbjct: 393 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 452

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSF 192
           H + A E+   M  + +       ++++  C+  G    GI  F  + +   + RD  + 
Sbjct: 453 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 512

Query: 193 ASVLSVCD-AGLLEFGRQ-LHSLVTKSGFSCLVSVVNA 228
              + +   AG L+     LH++  K  F  LV+++  
Sbjct: 513 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGG 550


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 225/728 (30%), Positives = 348/728 (47%), Gaps = 81/728 (11%)

Query: 46  QIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNA 105
           QI  +  +  D   L+ +L  C  L       QLH    + GL   P             
Sbjct: 15  QIKEADPMTKD-SCLNESLRCCKTLNQL---KQLHCQITKNGLDQIPST----------- 59

Query: 106 RDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF-----DKMPDRDLPVYNAM 160
             L  +    +EI +P+                +DYA + F     D   D  L + N++
Sbjct: 60  --LTKLVNAGAEIASPE---------------SLDYARKAFELFKEDVRSDDALFMLNSL 102

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSG 218
           I G +  G     I L+  M  L V  ++Y+F  VLS C   A   E G Q+H  V K G
Sbjct: 103 IRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCE-GIQVHGSVVKMG 161

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
               V + N LI  Y  CG++    KVFE       + +S+  ++ G A   R +EA+  
Sbjct: 162 LEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSER--NVVSWTSLICGYARGDRPKEAVSL 219

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F +M+ A +RPS +T V V+SAC   R   +G +V A   + G +    + NA + MY  
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           CG ID A  +F    ++++V +NT++S YA++ L R A+    EM   G RPD  T  S 
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339

Query: 396 L-ASSGFIEMV--EMIHAFVFINGI-----ITNIQVS----------------------- 424
           + AS+  +++   ++ H +V  NG+     I N+ +                        
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399

Query: 425 ---NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
              N+L + + +N  ++ A+++F+ +  RN + WNT+I+G +        ++ F E+   
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++ D  T+    S+C  + +    K +H Y+ KN +   M L  A++ ++A+CGD   +
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSA 519

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           ++VFN M E+D  +W A I   A  G G+ A   F  M   G +KPD   F  VL+ACSH
Sbjct: 520 MQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQG-VKPDVVLFVQVLTACSH 578

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            G V+ G  IF S++ D+G  P  +H  CM+DLLGRAG L EA  +I S  ++     W 
Sbjct: 579 GGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWG 637

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           +L +AC  H N+ +    A  + E    +  V+VLLSNIYA+AG W + A +R  L+  G
Sbjct: 638 SLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKG 697

Query: 722 VIKQPGCS 729
           V K PG S
Sbjct: 698 VRKVPGSS 705



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/621 (23%), Positives = 266/621 (42%), Gaps = 78/621 (12%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S + L  LN  +   S +G  ++A+ L+V++     + P+ Y+    L+ C  +     G
Sbjct: 92  SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVL-GVTPNHYTFPFVLSGCTKIAAFCEG 150

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+H   ++ GL+    + N ++  Y     +    +VF  +   +V SWT+        
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTS-------- 202

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
                                  +I G          + LF EM +  +R  + +   V+
Sbjct: 203 -----------------------LICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVI 239

Query: 197 SVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           S C A L  L+ G ++ + + + G      +VNAL+ MY  CG +  A ++F+E      
Sbjct: 240 SAC-AKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDR-- 296

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVH 311
           + + YN ++   A  G   EAL    +ML    RP  +T +S +SA    +    G   H
Sbjct: 297 NLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCH 356

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS--------------- 356
              +++G E + S+ N  I MY  CGK + AC +F  +  K +VS               
Sbjct: 357 GYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVE 416

Query: 357 ----------------WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
                           WNTMIS   Q++L   AI  + EMQ  GI+ D  T   + ++ G
Sbjct: 417 SAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACG 476

Query: 401 FI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           ++   E+ + +H ++  NGI  +++++ AL+  +A+    + A Q+F+ M+ R++  W  
Sbjct: 477 YLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTA 536

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
            I    + G        F+++L+  ++PD       L++C+    +  G  I   +  + 
Sbjct: 537 AIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHG 596

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
           +  ++     M+ L  + G L  +  +  +M +E + + W +L++A   H   K      
Sbjct: 597 ISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVH---KNVEMAT 653

Query: 577 KAMQDVGRIKPDQATFTAVLS 597
            A + +  + P +A    +LS
Sbjct: 654 YAAERINELAPQRAGVHVLLS 674


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 179/507 (35%), Positives = 291/507 (57%), Gaps = 38/507 (7%)

Query: 263 MDGLASVGR---VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           +D L S  R     EA+  + +M V+  RP    F +V+ A       + G Q+HA A+K
Sbjct: 61  VDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVK 120

Query: 317 SGF-EAYTSVSNAAITMYSSCG--------------------KIDEACMIFARLQEKDIV 355
            G+  +  +V+N  + MY  CG                    ++D++  +F    ++D+V
Sbjct: 121 FGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMV 180

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFV 412
           SWNTMIS+++Q +    A+  +  M   G+  D  T  S+L +   +E +++   IHA+V
Sbjct: 181 SWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYV 240

Query: 413 FING-IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
             N  +I N  V +AL+  Y    +++   ++F ++  R I  WN +I+G+  NG   + 
Sbjct: 241 LRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKA 300

Query: 472 LQHFSELL-MSELRPDEYTLSVALSSCAR-ISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           L  F E++ ++ L P+  T++  + +C   ++++  GK+IH Y ++N L S +++G+A++
Sbjct: 301 LILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALV 360

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM-QDVGR---I 585
            +YAKCG L+ S RVFN M  K+ I+WN LI A   HG+G+EA+  FK M  + GR    
Sbjct: 361 DMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEA 420

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KP++ TF  V +ACSH+GL+ +G  +F  M +D+G  P  DH +C++DLLGRAG L+EA 
Sbjct: 421 KPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAY 480

Query: 646 RVINSQHIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
            ++N+   +  +   W +L  AC  H N+ LG + A  LL  E +  S YVLLSNIY++A
Sbjct: 481 ELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSA 540

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           GLW +A  +R+ +++ GV K+PGCSWI
Sbjct: 541 GLWNKAMEVRKNMRQMGVKKEPGCSWI 567



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 220/452 (48%), Gaps = 33/452 (7%)

Query: 27  SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +L + +RS  +++A+  ++++  S   +PD ++    L A + L++   G Q+HA A++ 
Sbjct: 63  ALRSRTRSNDFREAISTYIEMTVS-GARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKF 121

Query: 87  GLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           G  +    VANT++++Y     +               ++    ++   K+G VD +  +
Sbjct: 122 GYGSSSVTVANTLVNMYGKCGGI-----------GDKTFTNNALMAMYAKLGRVDDSKAL 170

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLL 204
           F+   DRD+  +N MI+  +++      +  FR M    V  D  + ASVL  C     L
Sbjct: 171 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 230

Query: 205 EFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           + G+++H+ V ++      S V +AL+ MY NC  V    +VF+   G   +   +N M+
Sbjct: 231 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIE--LWNAMI 288

Query: 264 DGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCPRV----GYQVHAQAMKSG 318
            G A  G  E+ALI F +M+ VA L P+  T  SVM AC+        G ++HA A+++ 
Sbjct: 289 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNM 348

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
             +  +V +A + MY+ CG ++ +  +F  +  K++++WN +I        G  A+  + 
Sbjct: 349 LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 408

Query: 379 EMQSVGIR-----PDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALIS 429
            M +   R     P+E TF ++ A+   SG I E + + +     +G+         ++ 
Sbjct: 409 NMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVD 468

Query: 430 AYAKNERIKQAYQIFHNMSPR--NIITWNTLI 459
              +  ++++AY++ + M      +  W++L+
Sbjct: 469 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 32/348 (9%)

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMI 408
           +   SW   + +  + N  R AI  Y+EM   G RPD F F ++L A SG   ++  E I
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 409 HAF---------------VFIN------GIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           HA                  +N      GI      +NAL++ YAK  R+  +  +F + 
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             R++++WNT+I+ F  +    + L  F  +++  +  D  T++  L +C+ +  L  GK
Sbjct: 175 VDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGK 234

Query: 508 QIHGYVLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +IH YVL+NN LI    +G+A++ +Y  C  ++   RVF+ ++ +    WNA+IS YA++
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA-GLVDDGTRIFDSMVNDYGFIPAE 625
           G  ++A+  F  M  V  + P+  T  +V+ AC H+   +  G  I    + +   + A 
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRN---MLAS 351

Query: 626 DHL--SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           D    S ++D+  + G L+ + RV N +        W  L  AC  HG
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFN-EMPNKNVITWNVLIMACGMHG 398



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 13/180 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN-LRNAAFGNQLHAYA 83
           N  ++  +R+G  + AL LF+++     L P+  ++++ + AC + L   A G ++HAYA
Sbjct: 285 NAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYA 344

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +R  L +   V + ++ +Y     L   +RVF+E+ N +V +W   + AC   G  + A 
Sbjct: 345 IRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEAL 404

Query: 144 EVFDKM---------PDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
           E+F  M            +   +  +   C+ +G    G+ LF  M   H ++   D+Y+
Sbjct: 405 ELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYA 464


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 348/714 (48%), Gaps = 66/714 (9%)

Query: 44  FVQIHSSHK------LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           FV   S+H+       +P  ++     +A A L     G  +HAY +R GL         
Sbjct: 92  FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGL--------- 142

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
                           +  +  +  V S   ++ A  + G+V  A +VF++MP+RD+  +
Sbjct: 143 ----------------LVGDGDSVAVASSLVYMYA--RCGNVRDAVKVFEEMPERDVVAW 184

Query: 158 NAMITGCTENGYEDIGIGLFREMHKL----DVRRDNYSFASVLSVCDAGLLE---FGRQL 210
            A+I+GC  NG    G+    EM +L     VR ++ +  S L  C  G+L+    GR L
Sbjct: 185 TAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEAC--GVLDELNSGRCL 242

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V K G      V++AL +MY  C +  DAC +F E      D +S+  ++      G
Sbjct: 243 HGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEK--DVVSWTSLIGIYCRRG 300

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
            + EA+  F+ M+ + L+P E+    V+S          G   HA   K  F     + N
Sbjct: 301 LITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGN 360

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I+MY     +D A  +F  L ++D  SWN M+  Y +       +  Y EMQ   +R 
Sbjct: 361 ALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQ---LR- 416

Query: 388 DEFTF----GSLLAS-SGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERI 437
           D++ F     SL+++ S    + E+      H +   + +  +  V+N LI  Y +  + 
Sbjct: 417 DKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKF 476

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             A +IF     + +++TWNTLI+ +   G     +  + ++L+  L P+  TL   +S+
Sbjct: 477 DHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISA 536

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA + +L  G++IH YV +      +S+  A+I +YAKCG L  + R+F+ M++ D ++W
Sbjct: 537 CANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAW 596

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N +IS Y  HGE K+A+  F  M+  G IKP+  TF A+LSA  H+GL+++G ++F  M 
Sbjct: 597 NVMISGYGMHGEAKQALELFGKMEG-GSIKPNGVTFLAILSALCHSGLLEEGRKVFTRM- 654

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             Y   P   H +CM+DLLG++G+L EAE ++ +  I+     W  L SAC  H N  +G
Sbjct: 655 GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMG 714

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
             IA      + +    Y+L+SN Y  A  W+E   +RE +K  GV  Q G  W
Sbjct: 715 LRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGV--QKGVGW 766



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 178/630 (28%), Positives = 298/630 (47%), Gaps = 44/630 (6%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI--GIGL 176
           Q PD+ +    +SA +  G    A   F   P  D  ++N++I   T +   D    +  
Sbjct: 43  QRPDLAA--KLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIR--THHCASDFVAALSA 98

Query: 177 FREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGF----SCLVSVVNALIT 231
            R M     R   ++     S   + G L  G  +H+   + G        V+V ++L+ 
Sbjct: 99  HRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVY 158

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASL 287
           MY  CGNV DA KVFEE      D +++  ++ G    G   E L    +M+      S+
Sbjct: 159 MYARCGNVRDAVKVFEEMPER--DVVAWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSV 216

Query: 288 RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           RP+  T  S + AC        G  +H   +K G      V +A  +MYS C   ++AC 
Sbjct: 217 RPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACA 276

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG---SLLASSGF 401
           +F  L EKD+VSW ++I  Y +R L   A+  + +M   G++PDE       S L ++G 
Sbjct: 277 LFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGN 336

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   +  HA +       ++ + NALIS Y K E +  A ++F  +  R+  +WN ++ G
Sbjct: 337 VHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVG 396

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEY-------TLSVALSSCARISSLRHGKQIHGYVL 514
           +   G  V+ L+ + E+   +LR D+Y       +L  A+SSC+R++ LR G+  H Y +
Sbjct: 397 YCKAGCDVKCLELYREM---QLR-DKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSI 452

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAV 573
           K+ L    S+ N +I +Y +CG  D + ++F +  ++ D ++WN LIS+YA  G    A+
Sbjct: 453 KHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAM 512

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           S +  M   G + P+  T   V+SAC++   ++ G +I  S V + G+       + ++D
Sbjct: 513 SLYDQMLIEG-LTPNSTTLITVISACANLVALERGEKIH-SYVKEMGWDYDVSINTALID 570

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           +  + G L  A R+ +S  +Q     W  + S    HG  +    + G  +E    KP+ 
Sbjct: 571 MYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMHGEAKQALELFG-KMEGGSIKPNG 628

Query: 694 YVLLSNIYAA--AGLWEEAANIRELLKRTG 721
              L+ + A   +GL EE    R++  R G
Sbjct: 629 VTFLAILSALCHSGLLEEG---RKVFTRMG 655



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 188/365 (51%), Gaps = 18/365 (4%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           +VHA A+ SG      ++   ++ YSS G+   A + F+     D   WN++I T+   +
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIIT---- 419
              +A+ A+  M + G RP  FT  + LA+S   E+  +     +HA+    G++     
Sbjct: 91  DFVAALSAHRRMLASGARPSPFT--APLAASASAELGALGVGAAVHAYCVRYGLLVGDGD 148

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++ V+++L+  YA+   ++ A ++F  M  R+++ W  +I+G + NG   +GL++  E++
Sbjct: 149 SVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMV 208

Query: 480 M----SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
                  +RP+  T+   L +C  +  L  G+ +HGYV+K  +     + +A+ ++Y+KC
Sbjct: 209 RLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKC 268

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
              + +  +F  + EKD +SW +LI  Y + G   EA+  F+ M + G ++PD+   + V
Sbjct: 269 YSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESG-LQPDEILVSCV 327

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           LS   + G V  G + F +++    F  +    + ++ + G+   +D A RV    H Q 
Sbjct: 328 LSGLGNNGNVHGG-KTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLH-QR 385

Query: 656 RSDNW 660
            +D+W
Sbjct: 386 DADSW 390



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 204/477 (42%), Gaps = 54/477 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G   +A+ LF Q+  S  L+PD   +S  L+   N  N   G   HA   +       
Sbjct: 298 RRGLITEAMELFQQMMES-GLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSV 356

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + N ++S+Y     + S  RVF  +   D  SW                          
Sbjct: 357 LIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW-------------------------- 390

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF-------ASVLSVCDA-GLL 204
                N M+ G  + G +   + L+REM      RD Y F        S +S C     L
Sbjct: 391 -----NLMVVGYCKAGCDVKCLELYREMQ----LRDKYEFWCVADSLVSAISSCSRLAEL 441

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR  H    K       SV N LI MY  CG    ACK+F  AK    D +++N ++ 
Sbjct: 442 RLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAK-LKGDVVTWNTLIS 500

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEA 321
             A +G    A+  +  ML+  L P+  T ++V+SAC   +    G ++H+   + G++ 
Sbjct: 501 SYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDY 560

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             S++ A I MY+ CG++  A  IF  + + D+V+WN MIS Y      + A+  + +M+
Sbjct: 561 DVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKME 620

Query: 382 SVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
              I+P+  TF ++L++   SG +E    +   +    +  N++    ++    K+  ++
Sbjct: 621 GGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPNLKHYACMVDLLGKSGHLQ 680

Query: 439 QAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
           +A  +   M   P   I W TL++   L+     GL+   +   S+   + Y + ++
Sbjct: 681 EAEDMVLAMPIEPDGGI-WGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILIS 736



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 92/358 (25%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++ +  GH   A+ L+ Q+     L P+  +L T ++ACANL     G ++H+Y  
Sbjct: 496 NTLISSYAHLGHSNAAMSLYDQM-LIEGLTPNSTTLITVISACANLVALERGEKIHSYVK 554

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G      +   ++ +Y     L   +R+F  +   DV +W   +S     G    A E
Sbjct: 555 EMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 614

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
           +F KM                E G                ++ +  +F ++LS +C +GL
Sbjct: 615 LFGKM----------------EGG---------------SIKPNGVTFLAILSALCHSGL 643

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GR++ + + K                                 K Y C       M+
Sbjct: 644 LEEGRKVFTRMGKYSLE--------------------------PNLKHYAC-------MV 670

Query: 264 DGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           D L   G ++EA     DM++A  + P    + +++SAC       +G ++  +A  S  
Sbjct: 671 DLLGKSGHLQEA----EDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDP 726

Query: 320 EA---YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           E    Y  +SN+    Y    K DE      +L+E       TM +   Q+ +G SA+
Sbjct: 727 ENEGYYILISNS----YGGAKKWDE----IEKLRE-------TMKNLGVQKGVGWSAV 769


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 194/609 (31%), Positives = 315/609 (51%), Gaps = 11/609 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           L    K G V  A ++FD+MP +++  + + ++G T NG  +    +F +M +  V  ++
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 190 YSFASVLSVCDAGLL---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           ++  + L+ C A        G Q+HSL  ++GF     V + L+ +Y  CG+   A  V 
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
             A+    D ++Y  ++  L   G    A      M+   + P+E T  S+++AC CP V
Sbjct: 156 --ARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAAC-CPLV 212

Query: 307 -GYQVHAQAMKS-GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            G Q+H   +K+ GF      S+  +  YS  G+ D A  +F  LQ K++V+W TM+  +
Sbjct: 213 LGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLH 272

Query: 365 AQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQV 423
            +      A+  + EM S G+  P+EF F   L +   I +   +H+    +G+ ++++V
Sbjct: 273 IRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRV 332

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           SNAL+S Y +   ++Q   +F  +   +I++W   I+ +  NG   + +   S +    L
Sbjct: 333 SNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGL 392

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P++Y  S  LSSCA ++ L  G+Q H   LK     K   GNA+I +Y+KCG +  +  
Sbjct: 393 TPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARL 452

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F++M  +D  SWN+LI  +AQHGE    +  F  M   G  +P+++T   VL+AC+HAG
Sbjct: 453 AFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGG-EPNESTLLGVLAACNHAG 511

Query: 604 LVDDGTRIFDS-MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           LVD+G   F S M   YG      H +CM+D+LGR+G  D+A  +I     +     W  
Sbjct: 512 LVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKT 571

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L ++C  HGNL  GR+ A  L+E      + YVL+S I+A  G W +A  +R  +   GV
Sbjct: 572 LLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGV 631

Query: 723 IKQPGCSWI 731
            K+ G SW+
Sbjct: 632 RKEAGRSWV 640



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 225/501 (44%), Gaps = 45/501 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H+ A+RAG      V + ++ LY       + + V + +++PDV ++T+ +SA  +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G    A E   +M                      +G G+    H         +  S+
Sbjct: 176 SGEFGMAAEALGQM----------------------MGHGVMPNEH---------TVTSI 204

Query: 196 LSVCDAGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L+ C    L  G Q+H  + K+ GFS  V   + L+  Y   G    A  VF+  +   C
Sbjct: 205 LAACCP--LVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQ---C 259

Query: 255 DH-ISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHA 312
            + +++  MM      GR E+AL  F +M+    + P+E  F   + AC    +G Q+H+
Sbjct: 260 KNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHS 319

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K G  ++  VSNA ++MY   G + +   +F  +++ DIVSW   IS Y Q   G  
Sbjct: 320 LAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEK 379

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           AI     M S G+ P+++ F S+L+S   + +++     H      G        NALI+
Sbjct: 380 AIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALIN 439

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+K  +I  A   F  M  R++ +WN+LI+G   +G     L+ FSE+  +   P+E T
Sbjct: 440 MYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNEST 499

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSL-RVFN 546
           L   L++C     +  G       +     + ++  +   M+ +  + G  D +L  +  
Sbjct: 500 LLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEE 559

Query: 547 MMIEKDTISWNALISAYAQHG 567
           M  E   + W  L+++   HG
Sbjct: 560 MPFEPGVLVWKTLLASCRLHG 580



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 49/341 (14%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  +DAL LF ++ S   + P+ ++ S  L AC ++   A G+QLH+ A++ GL ++ 
Sbjct: 274 RDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESI---ALGSQLHSLAIKHGLASHL 330

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V+N +LS+Y     +  ++ +F  I++PD+ SWT                         
Sbjct: 331 RVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWT------------------------- 365

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                 A I+   +NG+ +  I L   MH   +  ++Y+F+SVLS C D  LL+ GRQ H
Sbjct: 366 ------AAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFH 419

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH---ISYNVMMDGLAS 268
            L  K G        NALI MY  CG +V A   F+     + DH    S+N ++ G A 
Sbjct: 420 CLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFD-----IMDHRDVTSWNSLIHGHAQ 474

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
            G V+  L  F +M      P+E T + V++AC    +   G      AM   +  + + 
Sbjct: 475 HGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTP 534

Query: 326 SNAA--ITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMIST 363
            + A  + M    G+ D+A C+I     E  ++ W T++++
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLAS 575


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 194/609 (31%), Positives = 315/609 (51%), Gaps = 11/609 (1%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           L    K G V  A ++FD+MP +++  + + ++G T NG  +    +F +M +  V  ++
Sbjct: 36  LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEMFADMVESGVALND 95

Query: 190 YSFASVLSVCDAGLL---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
           ++  + L+ C A        G Q+HSL  ++GF     V + L+ +Y  CG+   A  V 
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVL 155

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
             A+    D ++Y  ++  L   G    A      M+   + P+E T  S+++AC CP V
Sbjct: 156 --ARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAAC-CPLV 212

Query: 307 -GYQVHAQAMKS-GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            G Q+H   +K+ GF      S+  +  YS  G+ D A  +F  LQ K++V+W TM+  +
Sbjct: 213 LGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLH 272

Query: 365 AQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQV 423
            +      A+  + EM S G+  P+EF F   L +   I +   +H+    +G+ ++++V
Sbjct: 273 IRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHSLAIKHGLASHLRV 332

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           SNAL+S Y +   ++Q   +F  +   +I++W   I+ +  NG   + +   S +    L
Sbjct: 333 SNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGL 392

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            P++Y  S  LSSCA ++ L  G+Q H   LK     K   GNA+I +Y+KCG +  +  
Sbjct: 393 TPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARL 452

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            F++M  +D  SWN+LI  +AQHGE    +  F  M   G  +P+++T   VL+AC+HAG
Sbjct: 453 AFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGG-EPNESTLLGVLAACNHAG 511

Query: 604 LVDDGTRIFDS-MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           LVD+G   F S M   YG      H +CM+D+LGR+G  D+A  +I     +     W  
Sbjct: 512 LVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKT 571

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L ++C  HGNL  GR+ A  L+E      + YVL+S I+A  G W +A  +R  +   GV
Sbjct: 572 LLASCRLHGNLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGV 631

Query: 723 IKQPGCSWI 731
            K+ G SW+
Sbjct: 632 RKEAGRSWV 640



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 225/501 (44%), Gaps = 45/501 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G Q+H+ A+RAG      V + ++ LY       + + V + +++PDV ++T+ +SA  +
Sbjct: 116 GEQVHSLAVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCR 175

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G    A E   +M                      +G G+    H         +  S+
Sbjct: 176 SGEFGMAAEALGQM----------------------MGHGVMPNEH---------TVTSI 204

Query: 196 LSVCDAGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L+ C    L  G Q+H  + K+ GFS  V   + L+  Y   G    A  VF+  +   C
Sbjct: 205 LAACCP--LVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQ---C 259

Query: 255 DH-ISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHA 312
            + +++  MM      GR E+AL  F +M+    + P+E  F   + AC    +G Q+H+
Sbjct: 260 KNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALGSQLHS 319

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K G  ++  VSNA ++MY   G + +   +F  +++ DIVSW   IS Y Q   G  
Sbjct: 320 LAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEK 379

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALIS 429
           AI     M S G+ P+++ F S+L+S   + +++     H      G        NALI+
Sbjct: 380 AIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFHCLALKLGCDVKTCTGNALIN 439

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+K  +I  A   F  M  R++ +WN+LI+G   +G     L+ FSE+  +   P+E T
Sbjct: 440 MYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQHGEVDMVLKAFSEMCSNGGEPNEST 499

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSL-RVFN 546
           L   L++C     +  G       +     + ++  +   M+ +  + G  D +L  +  
Sbjct: 500 LLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPPHYACMVDMLGRSGRFDDALCLIEE 559

Query: 547 MMIEKDTISWNALISAYAQHG 567
           M  E   + W  L+++   HG
Sbjct: 560 MPFEPGVLVWKTLLASCRLHG 580



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 49/341 (14%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  +DAL LF ++ S   + P+ ++ S  L AC ++   A G+QLH+ A++ GL ++ 
Sbjct: 274 RDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESI---ALGSQLHSLAIKHGLASHL 330

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V+N +LS+Y     +  ++ +F  I++PD+ SWT                         
Sbjct: 331 RVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWT------------------------- 365

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                 A I+   +NG+ +  I L   MH   +  ++Y+F+SVLS C D  LL+ GRQ H
Sbjct: 366 ------AAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQGRQFH 419

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH---ISYNVMMDGLAS 268
            L  K G        NALI MY  CG +V A   F+     + DH    S+N ++ G A 
Sbjct: 420 CLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFD-----IMDHRDVTSWNSLIHGHAQ 474

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
            G V+  L  F +M      P+E T + V++AC    +   G      AM   +  + + 
Sbjct: 475 HGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTP 534

Query: 326 SNAA--ITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMIST 363
            + A  + M    G+ D+A C+I     E  ++ W T++++
Sbjct: 535 PHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLAS 575


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 187/619 (30%), Positives = 315/619 (50%), Gaps = 20/619 (3%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  LS    +G +  A  VFD  P  D   Y AM+    +       + L  +M +   R
Sbjct: 101 TKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRR---R 157

Query: 187 R------DNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           R      D++  +  L  C  +    +GR LH    K G +    V+N+L+ MY    ++
Sbjct: 158 RPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADGF-VMNSLVDMYAKAEDL 216

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A KVFE       + +S+  M+ G    G   + L+ F  M   ++ PSE T  +V++
Sbjct: 217 ECARKVFERIPDR--NVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVIT 274

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G  +H   +K G  + + +S A + MY  CG++D A  +F  L   D+V 
Sbjct: 275 ACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELSYIDLVL 334

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVF 413
           W TMI  Y Q      A+  +L+ +   I P+  T  ++L++S  +  + +   IH    
Sbjct: 335 WTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAV 394

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G++    V NAL+  YAK + + +A +IF  +S ++++ WN++I+G+  N      L 
Sbjct: 395 KLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALM 454

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F ++ +    PD  ++  ALS+   +  L  GK IHGY +K+  +S + +  A++ LY 
Sbjct: 455 LFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYN 514

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCGDL  + RVF+ M ++++++W A+I  Y   G+   ++  F  M   G + P+   FT
Sbjct: 515 KCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDG-VYPNDIAFT 573

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           ++LS CSH+G+V  G R FDSM   +   P+  H +CM+D+L RAG L++A   I++  +
Sbjct: 574 SILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPM 633

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           QA +  W A    C  H  L+        ++    ++P +YVL+SN+Y + G+W+++  I
Sbjct: 634 QADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLISNLYTSNGMWDKSLAI 693

Query: 714 RELLKRTGVIKQPGCSWIG 732
           R  ++  G++K PGCS +G
Sbjct: 694 RRWMQEKGLVKLPGCSSVG 712



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/572 (28%), Positives = 277/572 (48%), Gaps = 51/572 (8%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKP-----DIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           L ++  + DA+ L    H   + +P     D + LS  L AC      ++G  LH  A++
Sbjct: 138 LVQTERHADAVALH---HDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIK 194

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
            G  A   V N+++ +Y  A DL   ++VF                              
Sbjct: 195 VG-GADGFVMNSLVDMYAKAEDLECARKVF------------------------------ 223

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-L 204
            +++PDR++  + +MI+GC +NG+   G+ LF +M + +V    Y+ A+V++ C A   L
Sbjct: 224 -ERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGL 282

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GR +H  V K G      +  AL+ MY  CG +  A  VF+E   Y+ D + +  M+ 
Sbjct: 283 HQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDELS-YI-DLVLWTTMIV 340

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
           G    G   +AL  F D   A++ P+ +T  +V+SA    R   +G  +H  A+K G   
Sbjct: 341 GYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVE 400

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
           Y  V NA + MY+ C  + EA  IF R+  KD+V+WN+MIS YA+ N+G  A++ + +M 
Sbjct: 401 YNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMS 460

Query: 382 SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G  PD  +  + L++S   G + + + IH +   +  ++NI V  AL++ Y K   + 
Sbjct: 461 LQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLL 520

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F  M+ RN +TW  +I G+ + G     +  F E+L   + P++   +  LS+C+
Sbjct: 521 SARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCS 580

Query: 499 RISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISW 556
               +  GK+    + ++ N+   M     M+ + A+ G+L+ +L  + NM ++ DT  W
Sbjct: 581 HSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVW 640

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
            A +     H   + A    K M  +   +PD
Sbjct: 641 GAFLHGCELHSRLQFAEEAIKRMMVLHPERPD 672



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 207/477 (43%), Gaps = 62/477 (12%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G   D L LF ++   + + P  Y+++T + AC+ L     G  +H   ++ GL +  
Sbjct: 243 QNGFASDGLLLFNKMRQDN-VPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNS 301

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            ++  +L +Y    +L   + VF E+   D+  WTT                        
Sbjct: 302 FISAALLDMYVKCGELDHARCVFDELSYIDLVLWTT------------------------ 337

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQL 210
                  MI G T+NG     + LF +    ++  ++ + A+VLS   A L  L  G+ +
Sbjct: 338 -------MIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSA-SAQLRDLSLGKSI 389

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  K G      V NAL+ MY  C  V +A ++F        D +++N M+ G A   
Sbjct: 390 HGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNK--DVVAWNSMISGYAENN 447

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
             ++AL+ F+ M +    P  ++ V+ +SA +C     +G  +H  A+K  F +   V  
Sbjct: 448 MGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDT 507

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + +Y+ CG +  A  +F  + +++ V+W  MI  Y  +     +I  + EM   G+ P
Sbjct: 508 ALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYP 567

Query: 388 DEFTFGSLLASSGFIEMV--------EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           ++  F S+L++     MV         M   F     I  +++    ++   A+   ++ 
Sbjct: 568 NDIAFTSILSTCSHSGMVTAGKRYFDSMAQHF----NITPSMKHYACMVDVLARAGNLED 623

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE------LLMSELRPDEYTL 490
           A +   NM     +  +T + G  L+G  +     F+E      +++   RPD Y L
Sbjct: 624 ALEFIDNMP----MQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVL 676



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 131/327 (40%), Gaps = 82/327 (25%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
            DAL LF Q+ S     PD  S+   L+A   L +   G  +H YA++    +  +V   
Sbjct: 450 DDALMLFKQM-SLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDTA 508

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L+LY    DL+S +RVF                               D+M DR+   +
Sbjct: 509 LLNLYNKCGDLLSARRVF-------------------------------DEMNDRNSVTW 537

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTK 216
            AMI G    G     I LF EM K  V  ++ +F S+LS C  +G++  G++       
Sbjct: 538 CAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKR------- 590

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
                           YF+  ++     +    K Y C       M+D LA  G +E+AL
Sbjct: 591 ----------------YFD--SMAQHFNITPSMKHYAC-------MVDVLARAGNLEDAL 625

Query: 277 IRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQVHAQAMKSGF-------EAYTSVSNA 328
               +M    ++     + + +  C L  R+  Q   +A+K          + Y  +SN 
Sbjct: 626 EFIDNM---PMQADTSVWGAFLHGCELHSRL--QFAEEAIKRMMVLHPERPDLYVLISN- 679

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIV 355
              +Y+S G  D++  I   +QEK +V
Sbjct: 680 ---LYTSNGMWDKSLAIRRWMQEKGLV 703


>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
 gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
          Length = 733

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 208/739 (28%), Positives = 352/739 (47%), Gaps = 95/739 (12%)

Query: 2   LQRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLS 61
            ++  ++T   +S   K+  L  +I  ++ S +G+Y  A   ++Q+   +   P+ +++ 
Sbjct: 77  FRKPHSSTYVFDSTNQKDTFLWNSIIKSHFS-NGNYFKAFDFYIQMRYDNT-PPNQFTIP 134

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
             +A CA L     G  +H    ++GL A                            +N 
Sbjct: 135 MIVATCAELLWLEEGKYIHGLVSKSGLFA----------------------------ENS 166

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
            V S  +F+    K G ++ A  +FD++  RD+  + A++ G   N   + G+    EM 
Sbjct: 167 AVGS--SFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMR 224

Query: 182 KLD---VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           ++     + ++ +       C + G +  GR LH L  K+G  C   V ++L++MY  CG
Sbjct: 225 RIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCG 284

Query: 238 NVVDA----CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           NV +A    C+V ++      D  S+  ++   A  G + E L  F DM V  + P  + 
Sbjct: 285 NVEEAHNSFCQVVDK------DVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIV 338

Query: 294 FVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
              ++      +  R G   H   ++  +    +V+NA ++MY   G ++ A  +F  + 
Sbjct: 339 VSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVH 398

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
           E    SWNTM+  Y                                           +H 
Sbjct: 399 EWSKESWNTMVFGY-------------------------------------------VHC 415

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           ++  N +  ++ ++N+LI  Y K   +  A+++F   + R+++TWNTLI+ +  +G   +
Sbjct: 416 YIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCR-TQRDVVTWNTLISSYTHSGHYAE 474

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            +  F E++  +L P+  TL + LS+C  + SL  GK +H Y+ +      +SLG A++ 
Sbjct: 475 AITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVD 534

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L+ S  +FN M EKD ISWN +IS Y  HG+   A+  F+ M+    +KP+  
Sbjct: 535 MYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQ-SNVKPNAI 593

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++LSAC+HAG VD+G ++FD M   Y   P   H +CM DLLGR+G L EAE ++ S
Sbjct: 594 TFLSLLSACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQS 652

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             I      W  L SAC  H  + +G  +A   +E + +    Y++LSN+Y + G W+EA
Sbjct: 653 MPICPDGGVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEA 712

Query: 711 ANIRELLKRTGVIKQPGCS 729
              REL+K  G+ K+ G S
Sbjct: 713 ERARELMKERGIGKRAGWS 731



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 119/574 (20%), Positives = 245/574 (42%), Gaps = 72/574 (12%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+L+  +G +  V + + LI++Y +      +  VF+       D   +N ++    S G
Sbjct: 52  HALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQK--DTFLWNSIIKSHFSNG 109

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG-FEAYTSVS 326
              +A   +  M   +  P++ T   +++ C   L    G  +H    KSG F   ++V 
Sbjct: 110 NYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVG 169

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           ++ + MY+ CG +++A ++F  +  +D+VSW  ++  Y   +     +    EM+ +G  
Sbjct: 170 SSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGD 229

Query: 387 PDEFTF----GSLLASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++       G   A      M+    +H      G+  +  V ++L+S Y+K   +++A
Sbjct: 230 GEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEA 289

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +  F  +  +++ +W ++I      GF  + L  F ++ + ++ PD   +S  L      
Sbjct: 290 HNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNS 349

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-----------NMMI 549
             +R GK  HG +++ N +   ++ NA++++Y K G L+ + ++F           N M+
Sbjct: 350 MMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMV 409

Query: 550 -------------------------------------------EKDTISWNALISAYAQH 566
                                                      ++D ++WN LIS+Y   
Sbjct: 410 FGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHS 469

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G   EA++ F  M    ++ P+ AT   VLSAC H   ++ G ++    + + GF     
Sbjct: 470 GHYAEAITLFDEMIS-EKLNPNSATLVIVLSACCHLPSLEKG-KMVHQYIKEGGFELNVS 527

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
             + ++D+  + G L+++  + NS   +    +W  + S    HG+      +    +E+
Sbjct: 528 LGTALVDMYAKCGQLEQSRELFNSMK-EKDVISWNVMISGYGLHGDANSAMEVFQ-QMEQ 585

Query: 687 EQDKPSVYVLLSNIYAA--AGLWEEAANIRELLK 718
              KP+    LS + A   AG  +E   + + ++
Sbjct: 586 SNVKPNAITFLSLLSACTHAGYVDEGKQLFDRMQ 619



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 179/360 (49%), Gaps = 10/360 (2%)

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           ++ HA  + +G      +S+  I++Y+S  K   +  +F    +KD   WN++I ++   
Sbjct: 49  HKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFLWNSIIKSHFSN 108

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIIT-NIQV 423
                A   Y++M+     P++FT   ++A+     ++E  + IH  V  +G+   N  V
Sbjct: 109 GNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAV 168

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM--- 480
            ++ +  YAK   ++ A  +F  +  R++++W  L+ G++ N    +GL+   E+     
Sbjct: 169 GSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGG 228

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
              + +  TL     +C  + ++  G+ +HG  +K  L     + ++++++Y+KCG+++ 
Sbjct: 229 DGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEE 288

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +   F  +++KD  SW ++I   A+ G   E ++ F  MQ V  + PD    + +L    
Sbjct: 289 AHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQ-VDDVYPDGIVVSCILLGFG 347

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           ++ +V +G + F  ++    ++  +   + +L +  + G L+ AE++ +  H  ++ ++W
Sbjct: 348 NSMMVREG-KAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSK-ESW 405


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 217/720 (30%), Positives = 352/720 (48%), Gaps = 47/720 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKP-DIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N ++  L  SG    ALH F  I SS    P    + +  LA C+ LR    G  +H + 
Sbjct: 5   NGTILQLYHSGRLSAALHAFQSIPSSPAPAPLSAATYAALLATCSRLRALCLGCLVHRHL 64

Query: 84  LRAGLKAYPH---VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           L     A P    V NT+L+ +                         T    C      +
Sbjct: 65  L-----ASPDPNLVRNTVLNNH-----------------------LITMYGRCAA---PE 93

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A  VFD+MP ++   + ++I    +N      +GLF  M +     D ++  S +  C 
Sbjct: 94  SARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACA 153

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G +  GRQ+H+   KS     + V NAL+TMY   G V D   +F   +    D IS+
Sbjct: 154 ELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREK--DPISW 211

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSACLCP---RVGYQVHAQAM 315
             ++ G A  G   EAL  FR+M+   +  P+E  F SV SAC        G Q+H+ ++
Sbjct: 212 GSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSV 271

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K   +  +    +   MY+ C K++ A  +F  +   D+VSWN++I+  +   L   A++
Sbjct: 272 KYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMV 331

Query: 376 AYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
              EM+  G+RPD  T   LL +      I+   ++H+++   G+  ++ V N+L+S YA
Sbjct: 332 LLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYA 391

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           +      A  +FH    R+++TWN+++   + +       + F+ L  S    D  +L+ 
Sbjct: 392 RCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNN 451

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEK 551
            LS+ A +      KQ+H    K  L++   L N +I  YAKCG LD ++++F MM    
Sbjct: 452 VLSASAELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNS 511

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D  SW++LI  YAQ G  ++A+  F  M+++G ++P+  TF  VL+ACS  GLVD+G   
Sbjct: 512 DVFSWSSLIVGYAQSGYPRKALDLFARMRNLG-VRPNHVTFVGVLTACSRVGLVDEGCYY 570

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +  M  ++G +P  +H SC++DLL RAG L EA + ++    +     W  L +    H 
Sbjct: 571 YSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHN 630

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++ +GR  A  +L  +    + YVLL NIY+A+G W E A +++ ++ +GV K PG SW+
Sbjct: 631 DVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWV 690



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 158/364 (43%), Gaps = 46/364 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +   S  G   +A+ L  ++  S  L+PD  ++   L AC        G  +H
Sbjct: 310 LVSWNSIINACSVEGLLSEAMVLLSEMRGS-GLRPDGITVRGLLCACVGCDAIQHGRLMH 368

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +Y ++ GL     V N++LS+Y    D  S   VF E ++ DV +W + L+AC +  H++
Sbjct: 369 SYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLE 428

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-C 199
              ++F+ +  R LP                                D  S  +VLS   
Sbjct: 429 VVFKLFNLL-QRSLPSL------------------------------DRISLNNVLSASA 457

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G  E  +Q+H+   K G      + N LI  Y  CG++ DA K+F E  G   D  S+
Sbjct: 458 ELGYFEMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLF-EMMGTNSDVFSW 516

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG------YQVHAQ 313
           + ++ G A  G   +AL  F  M    +RP+ +TFV V++A  C RVG      Y     
Sbjct: 517 SSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTA--CSRVGLVDEGCYYYSIM 574

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNL 369
             + G        +  I + +  G++ EA     ++  E DIV W T+++   T+    +
Sbjct: 575 EPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEM 634

Query: 370 GRSA 373
           GR A
Sbjct: 635 GRRA 638


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 216/728 (29%), Positives = 357/728 (49%), Gaps = 60/728 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+++A  +R+GH+  AL +F +  +   + PD  S    L A A+L + + G   H    
Sbjct: 10  NLAIAEYARNGHHARALEIF-RAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTVC 68

Query: 85  RA-GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
            A GL +   VA  +L++Y                                + G V +A 
Sbjct: 69  EASGLGSDVVVATAVLTMY-------------------------------NRCGSVSHAR 97

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
             FD M  R++  ++AMI    + G+    + LF  M    V+ +  +F SVL  C +  
Sbjct: 98  RAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMR 157

Query: 203 LLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISY 259
            +  G+ +H  +   G     V + N ++ MY  CG V  A +VFE  EAK    + +++
Sbjct: 158 AIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK----NAVTW 213

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
           N M+   +   R +EA     +M +  LRP+++T VSV+ AC   +    G  VH     
Sbjct: 214 NTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAG 273

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G E+  +V+NA + +Y  CGK+  A      ++ +D +SW T+++ YA+   G+ AI  
Sbjct: 274 EGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAV 333

Query: 377 YLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
              M   G++ D FTF +LL S      + + E IH  +  +GI  +  +  AL+  Y K
Sbjct: 334 IKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGK 393

Query: 434 NERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
                 A + F  MS  R++  WN L+  ++L     + L  F+ + +  + PD  T   
Sbjct: 394 CGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLS 453

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGDLDCSLRVF- 545
            L +CA +++L  G+  H  +L+  L  + ++ +A      +I +YAKCG L  +   F 
Sbjct: 454 ILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFA 513

Query: 546 --NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
                   D ++W+A+++AY+Q G  +EA+ CF +MQ  G +KPD  +F + ++ CSH+G
Sbjct: 514 KARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEG-VKPDSVSFVSAIAGCSHSG 572

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV +    F S+ +D+G  P E H +C++DLL RAG++ EAE ++    + A    W  L
Sbjct: 573 LVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTL 632

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
            SAC  +G+L   R +A  L        S Y LL++++  +  W++  N R+ L   G I
Sbjct: 633 LSACRTYGDLERARRVAARLASLRSG--SAYSLLASVFCLSRKWDDVRNARQSLVERGFI 690

Query: 724 KQPGCSWI 731
            QPGCSWI
Sbjct: 691 TQPGCSWI 698



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 254/512 (49%), Gaps = 18/512 (3%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFG 207
           M DR    +N  I     NG+    + +FR M    V  D  S  ++L +    G L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 208 RQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
              H  V + SG    V V  A++TMY  CG+V  A + F+     V + +S++ M+   
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAM--VVRNVVSWSAMIAAY 118

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
           A  G   +AL  F  M    ++ + +TFVSV+ AC   R   +G  +H + +  G     
Sbjct: 119 AQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDD 178

Query: 324 SV-SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +  N  + MY  CG++D A  +F R++ K+ V+WNTMI+  ++ +  + A     EM  
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDL 238

Query: 383 VGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G+RP++ T  S++ +  +++ +    ++H  V   G+ ++  V+NAL++ Y K  +++ 
Sbjct: 239 DGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRA 298

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A      +  R+ I+W TL+  +  +G   + +     +    ++ D +T    L SC  
Sbjct: 299 ARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVA 358

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNA 558
           I++L  G++IH  + ++ +     L  A++ +Y KCG+ D + R F+ M + +D   WNA
Sbjct: 359 IAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNA 418

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG----TRIFDS 614
           L++AY    +GKE +  F  M   G + PD  TF ++L AC+    +  G    +R+ + 
Sbjct: 419 LLAAYVLRDQGKETLGIFARMSLQG-VAPDAVTFLSILDACASLAALGLGRLTHSRMLER 477

Query: 615 MVNDYGFIPAEDHLSC-MLDLLGRAGYLDEAE 645
            + D   + + D L+  ++++  + G L +A+
Sbjct: 478 GLFDRQAVASADLLTTSVINMYAKCGSLADAK 509



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 201/417 (48%), Gaps = 10/417 (2%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQA 314
           S+N+ +   A  G    AL  FR M +  + P  ++ ++++ A         G   H   
Sbjct: 8   SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67

Query: 315 MK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            + SG  +   V+ A +TMY+ CG +  A   F  +  +++VSW+ MI+ YAQR     A
Sbjct: 68  CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDA 127

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII-TNIQVSNALIS 429
           +  ++ M   G++ +  TF S+L   AS   I + + IH  +  +G++  ++ + N +++
Sbjct: 128 LELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVN 187

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y K   +  A ++F  M  +N +TWNT+I     +    +      E+ +  LRP++ T
Sbjct: 188 MYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKIT 247

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   + +CA + S+  G+ +H  V    L S  ++ NA++ LY KCG L  +      + 
Sbjct: 248 LVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIE 307

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            +D ISW  L++AYA+HG GK A++  K M   G +K D  TF  +L +C     +  G 
Sbjct: 308 TRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEG-VKLDSFTFVNLLESCVAIAALALGE 366

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            I D +  + G        + ++D+ G+ G  D A R  +          W AL +A
Sbjct: 367 EIHDRLA-ESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAA 422



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 135/263 (51%), Gaps = 12/263 (4%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M+ R+  +WN  I  +  NG   + L+ F  + +  + PD  +    L + A +  L  G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 507 KQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           +  H  V + + L S + +  A++T+Y +CG +  + R F+ M+ ++ +SW+A+I+AYAQ
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ 120

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G   +A+  F  M   G +K +  TF +VL AC+    +  G  I + +V D G +  +
Sbjct: 121 RGHPGDALELFVRMDHEG-VKANAITFVSVLDACASMRAIALGKSIHERIVAD-GLLGDD 178

Query: 626 DHL-SCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGNLRLGRIIAGLL 683
             L + ++++ G+ G +D A  V   + ++A++   W  + +AC+ H   +       LL
Sbjct: 179 VILGNTIVNMYGKCGEVDLAREVF--ERMEAKNAVTWNTMIAACSRHDRYKEA---FALL 233

Query: 684 LEREQD--KPSVYVLLSNIYAAA 704
            E + D  +P+   L+S I A A
Sbjct: 234 GEMDLDGLRPNKITLVSVIDACA 256


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 209/637 (32%), Positives = 336/637 (52%), Gaps = 26/637 (4%)

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-DRDLPV-YNAMITGCTENG 168
           +KR  +   +  + + T   ++C +   V+ A  VFD++P  R  P+ ++ MI     NG
Sbjct: 26  LKRSLTLSSSTVLVNLTRLYASCNE---VELARHVFDEIPHPRINPIAWDLMIRAYVSNG 82

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVV 226
           + +  + L+ +M    VR   +++  VL  C AGL  +E G+ +HS V  S F+  + V 
Sbjct: 83  FAEKALDLYYKMLNSGVRPTKFTYPFVLKAC-AGLRAIEDGKLIHSHVKCSNFAADMYVC 141

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            AL+  Y  CG +  A KVF+E      D +++N M+ G +    + + +  F DM  + 
Sbjct: 142 TALVDFYAKCGELDMAIKVFDEMPKR--DIVAWNAMISGFSLHCCLTDVIGLFLDMRRSD 199

Query: 287 -LRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            L P+  T V +  A       R G  VH    + GF     V    + +Y+    I  A
Sbjct: 200 CLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYA 259

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM----QSVGIRPDEFTFGSLL-- 396
             +F    +K+ V+W+ MI  Y +  + + A   +L+M        + P     G +L  
Sbjct: 260 RRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNADMAMVTP--VAIGLILMG 317

Query: 397 -ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
            A  G +     +H +    G I ++ V N +IS YAK   +  A++ F  +  ++I+++
Sbjct: 318 CARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSY 377

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N+LI+G + N    +  + F ++  S +RPD  TL   L++C+ +++L HG   HGY + 
Sbjct: 378 NSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVV 437

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           N      S+ NA++ +Y KCG L  + RVF+ M ++D +SWN ++  +  HG GKEA+S 
Sbjct: 438 NGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSL 497

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV-NDYGFIPAEDHLSCMLDL 634
           F +MQD G + PD+ T  A+LSACSH+GLVD+G ++F+SM   D+  IP  DH +CM DL
Sbjct: 498 FNSMQDTG-VHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDL 556

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
           L RAGYLDEA   +N    +        L SAC  + N+ LG  ++  +    +   S+ 
Sbjct: 557 LARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTESL- 615

Query: 695 VLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           VLLSN Y+AA  WE+AA IR   K++G++K PG SW+
Sbjct: 616 VLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWV 652



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/582 (25%), Positives = 259/582 (44%), Gaps = 55/582 (9%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  + AL L+ ++ +S  ++P  ++    L ACA LR    G  +H++   +   A  +
Sbjct: 81  NGFAEKALDLYYKMLNS-GVRPTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMY 139

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V   ++  Y    +L    +VF E+   D+ +W                           
Sbjct: 140 VCTALVDFYAKCGELDMAIKVFDEMPKRDIVAW--------------------------- 172

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS--FASVLSVCDAGLLEFGRQLH 211
               NAMI+G + +      IGLF +M + D    N S       ++  AG L  G+ +H
Sbjct: 173 ----NAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVH 228

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
              T+ GFS  + V   ++ +Y     ++ A +VF+    +  + ++++ M+ G      
Sbjct: 229 GYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDS--DFKKNEVTWSAMIGGYVENEM 286

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL----CPRV-----GYQVHAQAMKSGFEAY 322
           ++EA   F  MLV     +++  V+ ++  L    C R      G  VH  A+K+GF   
Sbjct: 287 IKEAGEVFLQMLV----NADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILD 342

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            +V N  I+ Y+  G + +A   F  +  KDIVS+N++IS   +      +   + +M+S
Sbjct: 343 LTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKS 402

Query: 383 VGIRPDEFT-FGSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            GIRPD  T  G L A S    +      H +  +NG   N  + NAL+  Y K  ++  
Sbjct: 403 SGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYV 462

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A ++F  M  R+I++WNT++ GF ++G   + L  F+ +  + + PDE TL   LS+C+ 
Sbjct: 463 AKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSH 522

Query: 500 ISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISW 556
              +  GKQ+   + +   N+I ++   N M  L A+ G LD +    N M  E D    
Sbjct: 523 SGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVL 582

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             L+SA   +   +      K MQ +G         +   SA
Sbjct: 583 GTLLSACWTYKNVELGNEVSKKMQSLGETTESLVLLSNTYSA 624


>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
 gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 564

 Score =  315 bits (808), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 298/533 (55%), Gaps = 14/533 (2%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H     +GF   + + + LI +Y   G+V  A K+F+       D +S+  M+   +  
Sbjct: 34  IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR--DVVSWTAMISRFSRC 91

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
           G   +AL+ F++M    ++ ++ T+ SV+ +C    C + G Q+H    K        V 
Sbjct: 92  GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 151

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A +++Y+ CGK++EA + F  ++E+D+VSWN MI  Y       ++   +  M + G +
Sbjct: 152 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 211

Query: 387 PDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD FTFGSLL +S  +   E+V  +H      G   +  +  +L++AY K   +  A+++
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271

Query: 444 FHNMSPRNIITWNTLINGF-LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
                 R++++   LI GF   N         F +++  + + DE  +S  L  C  I+S
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331

Query: 503 LRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +  G+QIHG+ LK++ I   ++LGN++I +YAK G+++ ++  F  M EKD  SW +LI+
Sbjct: 332 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 391

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y +HG  ++A+  +  M+   RIKP+  TF ++LSACSH G  + G +I+D+M+N +G 
Sbjct: 392 GYGRHGNFEKAIDLYNRMEH-ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 450

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQH--IQARSDNWWALFSACAAHGNLRLGRII 679
              E+HLSC++D+L R+GYL+EA  +I S+   +   S  W A   AC  HGN++L ++ 
Sbjct: 451 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 510

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI-KQPGCSWI 731
           A  LL  E  KP  Y+ L+++YAA G W+ A N R+L+K +G   K PG S +
Sbjct: 511 ATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 228/446 (51%), Gaps = 15/446 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V +A ++FD++  RD+  + AMI+  +  GY    + LF+EMH+ DV+ + +++ S
Sbjct: 59  KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C D G L+ G Q+H  V K   +  + V +AL+++Y  CG + +A   F+  K   
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER- 177

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+N M+DG  +    + +   F+ ML    +P   TF S++ A +   C  +  ++
Sbjct: 178 -DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 236

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+K GF   +++  + +  Y  CG +  A  +    +++D++S   +I+ ++Q+N  
Sbjct: 237 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 296

Query: 371 RS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT-NIQVSN 425
            S A   + +M  +  + DE    S+L     I  V +   IH F   +  I  ++ + N
Sbjct: 297 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 356

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LI  YAK+  I+ A   F  M  +++ +W +LI G+  +G   + +  ++ +    ++P
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCS--- 541
           ++ T    LS+C+       G +I+  ++ K+ + ++    + +I + A+ G L+ +   
Sbjct: 417 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 476

Query: 542 LRVFNMMIEKDTISWNALISAYAQHG 567
           +R    ++   + +W A + A  +HG
Sbjct: 477 IRSKEGIVSLSSSTWGAFLDACRRHG 502



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 219/477 (45%), Gaps = 46/477 (9%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           SK  ++     ++  SR G++ DAL LF ++H    +K + ++  + L +C +L     G
Sbjct: 74  SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEG 132

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+H    +        V + +LSLY                            + C KM
Sbjct: 133 MQIHGSVEKGNCAGNLIVRSALLSLY----------------------------ARCGKM 164

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              + A   FD M +RDL  +NAMI G T N   D    LF+ M     + D ++F S+L
Sbjct: 165 ---EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
                   LE   +LH L  K GF    +++ +L+  Y  CG++ +A K+ E  K    D
Sbjct: 222 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR--D 279

Query: 256 HISYNVMMDGLASVGR-VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVH 311
            +S   ++ G +       +A   F+DM+    +  E+   S++  C       +G Q+H
Sbjct: 280 LLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 339

Query: 312 AQAMKSGFEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
             A+KS    +  ++ N+ I MY+  G+I++A + F  ++EKD+ SW ++I+ Y +    
Sbjct: 340 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNF 399

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIH-AFVFINGIITNIQVSNA 426
             AI  Y  M+   I+P++ TF SLL++   +G  E+   I+   +  +GI    +  + 
Sbjct: 400 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC 459

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +I   A++  +++AY +    S   I++ ++   G  L+     G    S++  ++L
Sbjct: 460 IIDMLARSGYLEEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQL 514



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 1/192 (0%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           +IH     NG  +N+Q+ + LI  Y K   +K A ++F  +S R++++W  +I+ F   G
Sbjct: 33  LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +    L  F E+   +++ +++T    L SC  +  L+ G QIHG V K N    + + +
Sbjct: 93  YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+++LYA+CG ++ +   F+ M E+D +SWNA+I  Y  +     + S F+ M   G+ K
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-K 211

Query: 587 PDQATFTAVLSA 598
           PD  TF ++L A
Sbjct: 212 PDCFTFGSLLRA 223


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 200/691 (28%), Positives = 354/691 (51%), Gaps = 39/691 (5%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           + +++ +I + +  L AC++LR    G ++H   +R              SL ++ R   
Sbjct: 3   AREIQAEISACAAILTACSDLRALPEGKRVHGLVMRE-------------SLLQDERPDE 49

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           S+      ++N         +    + G  D A +VFD+M D+++  + ++I+  T  G+
Sbjct: 50  SL------LEN-------IVIQMYLRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGH 96

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVN 227
               + LFR+M    V  D  +F S+L         L+ G+++HS + ++G+     V+N
Sbjct: 97  FGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMN 156

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
            ++ MY  CG+V  A  VF+  +    +  S+ +++   A  G   E L     M  A +
Sbjct: 157 LVVEMYGKCGDVEQAGNVFDSIQDP--NVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGV 214

Query: 288 RPSELTFVSVMSACLCPRVGYQ---VHAQAMKS-GFEAYTSVSNAAITMYSSCGKIDEAC 343
           +P   TF +V+ AC       +   +HA  + S G +   +V  A I +Y  CG ++EA 
Sbjct: 215 KPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAF 274

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F ++  KDIVSW++MI+ +AQ    +SAI   + M   G+RP+  TF ++L +   ++
Sbjct: 275 GVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLK 334

Query: 404 MVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
             +    IHA +   G   ++ +++AL+  Y     ++ A  IF +   R++++W+++I 
Sbjct: 335 AFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIA 394

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G+  N  P + L  F E+ +  ++P+  T   A+ +CA + +LR G Q+H  V    L  
Sbjct: 395 GYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDK 454

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +  A++ LY KCG L+ +  VF  M +K+ ++W ++  AY Q+G G  ++     M+
Sbjct: 455 DVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGME 514

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G +KPD   F A+L +C++AG +  G   ++ M  D+G  PA +H  CM+D+LGRAG 
Sbjct: 515 LQG-MKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGK 573

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L+ AE++IN+   ++ S  W  L +AC AH +       A  + + E    + YVLLS++
Sbjct: 574 LEAAEQLINTMKFES-SLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSV 632

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + AAG WE A   R  +   GV +  G S I
Sbjct: 633 FCAAGSWEAAEETRRRMDGRGVQRLLGRSSI 663



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 145/575 (25%), Positives = 279/575 (48%), Gaps = 47/575 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPD-IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           +GH+ DA+ LF ++  S  + PD I   S  L      RN   G ++H++ ++ G +   
Sbjct: 94  AGHFGDAMVLFRKMLLS-GVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDR 152

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++ +Y    D+     VF  IQ+P+V+SWT  ++A  + GH              
Sbjct: 153 MVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGH-------------- 198

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
                      C E       + L   M++  V+ D Y+F +VL  C A G LE  + LH
Sbjct: 199 -----------CMEV------LRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILH 241

Query: 212 -SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            + ++ +G     +V  ALI +Y  CG + +A  VF +      D +S++ M+   A  G
Sbjct: 242 AATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK--DIVSWSSMIAAFAQSG 299

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
           + + A+     M +  +RP+ +TFV+V+ A    +    G ++HA+ +++G+     +++
Sbjct: 300 QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTS 359

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY + G ++ A  IF   +E+D+VSW++MI+ Y+Q      A+  + EM+  G++P
Sbjct: 360 ALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQP 419

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +  TF S +   A  G +     +H  V   G+  ++ V+ AL++ Y K  R+++A  +F
Sbjct: 420 NSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVF 479

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +N++TW ++   +  NG   + L+    + +  ++PD       L SC     + 
Sbjct: 480 LGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMS 539

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            G   +  + ++  +   +     M+ +  + G L+ + ++ N M  + +++W  L++A 
Sbjct: 540 KGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTAC 599

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             H +   A    +A + + +++P  AT   +LS+
Sbjct: 600 KAHNDTARAA---RAAEKIFQLEPKNATPYVLLSS 631



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 247/485 (50%), Gaps = 24/485 (4%)

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF--------SCLVSVVNALI 230
           M   +++ +  + A++L+ C D   L  G+++H LV +           S L ++V   I
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIV---I 57

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY  CG    A  VF+  K    + +++  ++      G   +A++ FR ML++ + P 
Sbjct: 58  QMYLRCGCTDLALDVFDRMKDQ--NVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPD 115

Query: 291 ELTFVSVMSACLCPR----VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            +TF S++            G +VH+  M++G+E    V N  + MY  CG +++A  +F
Sbjct: 116 RITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVF 175

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIE 403
             +Q+ ++ SW  +I+ YAQ       +     M   G++PD +TF ++L +    G +E
Sbjct: 176 DSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALE 235

Query: 404 MVEMIH-AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
             +++H A +   G+  +  V  ALI+ Y K   +++A+ +F  +  ++I++W+++I  F
Sbjct: 236 EAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAF 295

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +G     +Q    + +  +RP+  T    L +   + + ++GK+IH  +++      +
Sbjct: 296 AQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            L +A++ +Y   G ++ +  +F    E+D +SW+++I+ Y+Q+     A+S F+ M+ V
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME-V 414

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             ++P+  TF + + AC+  G +  GT++ +  V   G        + +++L G+ G L+
Sbjct: 415 DGVQPNSVTFVSAIDACAGVGALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLE 473

Query: 643 EAERV 647
           EAE V
Sbjct: 474 EAEAV 478



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 223/481 (46%), Gaps = 45/481 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            I +A  +++GH  + L L  +++ +  +KPD Y+ +T L AC  +        LHA  +
Sbjct: 187 TIIIAAYAQNGHCMEVLRLLSRMNQA-GVKPDGYTFTTVLGACTAVGALEEAKILHAATI 245

Query: 85  RA-GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
            + GL     V   +++LY     L     VF +I N D+ SW++ ++A  + G    A 
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSA- 304

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
                                         I L   M    VR +N +F +VL +V    
Sbjct: 305 ------------------------------IQLLMLMDLEGVRPNNVTFVNVLEAVTSLK 334

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             ++G+++H+ + ++G+S  V + +AL+ MY N G V  A  +FE ++    D +S++ M
Sbjct: 335 AFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRER--DVVSWSSM 392

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           + G +       AL  FR+M V  ++P+ +TFVS + AC      R G Q+H +    G 
Sbjct: 393 IAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGL 452

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +    V+ A + +Y  CG+++EA  +F  +++K++++W ++   Y Q   G  ++     
Sbjct: 453 DKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHG 512

Query: 380 MQSVGIRPDEFTFGSLLASSGFI-EMVEMIHAFVFIN---GIITNIQVSNALISAYAKNE 435
           M+  G++PD   F ++L S  +  +M + +H +  +    GI   ++    ++    +  
Sbjct: 513 MELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAG 572

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +++ A Q+ + M   + + W  L+     +    +  +   ++   +L P   T  V LS
Sbjct: 573 KLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAARAAEKIF--QLEPKNATPYVLLS 630

Query: 496 S 496
           S
Sbjct: 631 S 631



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 13/294 (4%)

Query: 14  SNTSKELLLKLNISLANL-SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN 72
           S+T  +    +  +L NL  + G  ++A  +FVQI +      DI S S+ +AA A    
Sbjct: 246 SSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNK-----DIVSWSSMIAAFAQSGQ 300

Query: 73  AAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA 132
           A    QL       G++        +L    + +     K + + I            SA
Sbjct: 301 AKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSA 360

Query: 133 CTKM----GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
             KM    G V+ A  +F+   +RD+  +++MI G ++N      + LFREM    V+ +
Sbjct: 361 LVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPN 420

Query: 189 NYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           + +F S +  C   G L  G QLH  V   G    V V  AL+ +Y  CG + +A  VF 
Sbjct: 421 SVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFL 480

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             K    + +++  +       G    +L     M +  ++P  + FV+++ +C
Sbjct: 481 GMKKK--NLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSC 532


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 195/628 (31%), Positives = 331/628 (52%), Gaps = 16/628 (2%)

Query: 113  RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            R+     + D    T+ L    + G++  A +VFD MP RDL  ++ +++ C EN     
Sbjct: 684  RIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLK 743

Query: 173  GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
             + +F+ M    V  D  +  SV+  C + G L   R +H  +T+  F    ++ N+L+T
Sbjct: 744  ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLT 803

Query: 232  MYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY  CG+++ + K+FE+ AK    + +S+  M+         E+AL  F +ML + + P+
Sbjct: 804  MYSKCGDLLSSEKIFEKIAKK---NAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPN 860

Query: 291  ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEA-YTSVSNAAITMYSSCGKIDEACMIF 346
             +T  S++S+C      R G  VH  A++   +  Y S+S A + +Y+ CG++ +   I 
Sbjct: 861  LVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETIL 920

Query: 347  ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
              + +++IV WN+ IS YA R +   A+  + +M +  I+PD FT  S++++   +G + 
Sbjct: 921  HVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVR 980

Query: 404  MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
            + + IH  V I   +++  V N++I  Y+K+  +  A  +F  +  R+I+TWN+++ GF 
Sbjct: 981  LGKQIHGHV-IRTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFS 1039

Query: 464  LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
             NG  ++ +  F  +  S L  ++ T    + +C+ I SL  G+ +H  ++    I  + 
Sbjct: 1040 QNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCG-IKDLF 1098

Query: 524  LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
               A+I +YAKCGDL+ +  VF  M  +  +SW+++I+AY  HG    A+S F  M + G
Sbjct: 1099 TDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 1158

Query: 584  RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
              KP++  F  VLSAC H+G V++G   F+ M   +G  P  +H +C +DLL R+G L E
Sbjct: 1159 -TKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVSPNSEHFACFIDLLSRSGDLKE 1216

Query: 644  AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            A R I      A +  W +L + C  H  + + + I   + +   D    Y LLSNIYA 
Sbjct: 1217 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYAE 1276

Query: 704  AGLWEEAANIRELLKRTGVIKQPGCSWI 731
             G WEE   +R  +K   + K PG S I
Sbjct: 1277 EGEWEEFRRMRSAMKSLNLKKVPGYSAI 1304



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 169/616 (27%), Positives = 303/616 (49%), Gaps = 27/616 (4%)

Query: 122  DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
            D    T  + +   MG  D +  VF+  P  D  +Y  +I         D  I L+  + 
Sbjct: 591  DPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLV 650

Query: 182  KLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                +   + F SVL  C      L  GR++H  + KSG      +  +L+ MY   GN+
Sbjct: 651  SEKTQISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNL 710

Query: 240  VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             DA KVF+     V D ++++ ++        V +AL  F+ M+   + P  +T +SV+ 
Sbjct: 711  SDAEKVFDGMP--VRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVE 768

Query: 300  ACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
             C    C R+   VH Q  +  F+   ++ N+ +TMYS CG +  +  IF ++ +K+ VS
Sbjct: 769  GCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVS 828

Query: 357  WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVF 413
            W  MIS+Y +      A+ ++ EM   GI P+  T  S+L+S   +G I   + +H F  
Sbjct: 829  WTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAI 888

Query: 414  INGIITNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
               +  N + +S AL+  YA+  R+     I H +  RNI+ WN+ I+ +   G  ++ L
Sbjct: 889  RRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEAL 948

Query: 473  QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
              F +++   ++PD +TL+  +S+C     +R GKQIHG+V++ + +S   + N++I +Y
Sbjct: 949  CLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTD-VSDEFVQNSVIDMY 1007

Query: 533  AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            +K G ++ +  VF+ +  +  ++WN+++  ++Q+G   EA++ F  M     ++ ++ TF
Sbjct: 1008 SKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYH-SCLEINKVTF 1066

Query: 593  TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCMLDLLGRAGYLDEAERVINS 650
             AV+ ACS  G ++ G  +   ++        +D    + ++D+  + G L+ AE V  +
Sbjct: 1067 LAVIQACSSIGSLEKGRWVHHKLI----VCGIKDLFTDTALIDMYAKCGDLNTAETVFRA 1122

Query: 651  QHIQARS-DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGL 706
              +  RS  +W ++ +A   HG  R+G  I+      E       V+  N+ +A   +G 
Sbjct: 1123 --MSNRSIVSWSSMINAYGMHG--RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGS 1178

Query: 707  WEEAANIRELLKRTGV 722
             EE      L+K  GV
Sbjct: 1179 VEEGKYYFNLMKLFGV 1194



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 245/555 (44%), Gaps = 49/555 (8%)

Query: 53   LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            ++PD  ++ + +  CA L        +H    R        + N++L++Y    DL+S +
Sbjct: 756  VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSE 815

Query: 113  RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            ++F +I   +  SWT                               AMI+      + + 
Sbjct: 816  KIFEKIAKKNAVSWT-------------------------------AMISSYNRGEFSEK 844

Query: 173  GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSC-LVSVVNALI 230
             +  F EM K  +  +  +  S+LS C   GL+  G+ +H    +        S+  AL+
Sbjct: 845  ALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALV 904

Query: 231  TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
             +Y  CG + D C+      G   + + +N  +   A  G V EAL  FR M+   ++P 
Sbjct: 905  ELYAECGRLGD-CETILHVVGDR-NIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPD 962

Query: 291  ELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
              T  S++SAC      R+G Q+H   +++   +   V N+ I MYS  G ++ AC +F 
Sbjct: 963  SFTLASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSVIDMYSKSGFVNLACTVFD 1021

Query: 348  RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
            +++ + IV+WN+M+  ++Q      AI  +  M    +  ++ TF +++   +S G +E 
Sbjct: 1022 QIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEK 1081

Query: 405  VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
               +H  + + G I ++    ALI  YAK   +  A  +F  MS R+I++W+++IN + +
Sbjct: 1082 GRWVHHKLIVCG-IKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGM 1140

Query: 465  NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
            +G     +  F++++ S  +P+E      LS+C    S+  GK     +    +      
Sbjct: 1141 HGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEH 1200

Query: 525  GNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ-DV 582
                I L ++ GDL  + R    M    D   W +L++    H    + +   KA++ D+
Sbjct: 1201 FACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIH----QKMDIIKAIKNDI 1256

Query: 583  GRIKPDQATFTAVLS 597
              I  D   +  +LS
Sbjct: 1257 SDIVTDDTGYYTLLS 1271



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/476 (22%), Positives = 214/476 (44%), Gaps = 54/476 (11%)

Query: 294  FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEK 352
            ++ +  +C   R+  Q+HA  + +G      +     I  Y+  G  D + ++F      
Sbjct: 562  YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 621

Query: 353  DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVEM---I 408
            D   +  +I      +L  +AI  Y  + S   +  +F F S+L A +G  E + +   +
Sbjct: 622  DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKV 681

Query: 409  HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
            H  +  +G+  +  +  +L+  Y +   +  A ++F  M  R+++ W+TL++  L N   
Sbjct: 682  HGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEV 741

Query: 469  VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            ++ L+ F  ++   + PD  T+   +  CA +  LR  + +HG + +       +L N++
Sbjct: 742  LKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSL 801

Query: 529  ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
            +T+Y+KCGDL  S ++F  + +K+ +SW A+IS+Y +    ++A+  F  M   G I+P+
Sbjct: 802  LTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSG-IEPN 860

Query: 589  QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI------PAEDHLS-CMLDLLGRAGYL 641
              T  ++LS+C   GL+ +G  +       +GF       P  + LS  +++L    G L
Sbjct: 861  LVTLYSILSSCGLNGLIREGKSV-------HGFAIRRELDPNYESLSPALVELYAECGRL 913

Query: 642  DEAERVIN----------------------------------SQHIQARSDNWWALFSAC 667
             + E +++                                  +  I+  S    ++ SAC
Sbjct: 914  GDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISAC 973

Query: 668  AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
               G +RLG+ I G ++  +     V   + ++Y+ +G    A  + + +K   ++
Sbjct: 974  ENTGLVRLGKQIHGHVIRTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIV 1029



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 37/264 (14%)

Query: 39   DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
            +AL LF Q+  + ++KPD ++L++ ++AC N      G Q+H + +R  + +   V N++
Sbjct: 946  EALCLFRQM-VTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDV-SDEFVQNSV 1003

Query: 99   LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
            + +Y                               +K G V+ AC VFD++  R +  +N
Sbjct: 1004 IDMY-------------------------------SKSGFVNLACTVFDQIKHRSIVTWN 1032

Query: 159  AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
            +M+ G ++NG     I LF  M+   +  +  +F +V+  C + G LE GR +H  +   
Sbjct: 1033 SMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVC 1092

Query: 218  GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
            G   L +   ALI MY  CG++  A  VF          +S++ M++     GR+  A+ 
Sbjct: 1093 GIKDLFT-DTALIDMYAKCGDLNTAETVFRAMSNRSI--VSWSSMINAYGMHGRIGSAIS 1149

Query: 278  RFRDMLVASLRPSELTFVSVMSAC 301
             F  M+ +  +P+E+ F++V+SAC
Sbjct: 1150 TFNQMVESGTKPNEVVFMNVLSAC 1173


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 177/535 (33%), Positives = 286/535 (53%), Gaps = 8/535 (1%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+   Q+H+ +  + ++ L  + N LI +Y  CG +  A  +F     +    +++  ++
Sbjct: 158 LKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTSLI 217

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             L+      +AL  F  M  +   P++ TF S++SA     +   G Q+H+   K GF+
Sbjct: 218 THLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFD 277

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE- 379
           A   V  A + MY+ C  +  A  +F ++ E+++VSWN+MI  +   NL   A+  + + 
Sbjct: 278 ANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDV 337

Query: 380 MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           ++   + P+E +  S+L   A+ G +     +H  V   G++    V N+L+  Y K   
Sbjct: 338 LREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRF 397

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             +  ++F  +  R+++TWN L+ GF+ N    +   +F  +    + PDE + S  L S
Sbjct: 398 FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHS 457

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A +++L  G  IH  ++K   +  M +  ++IT+YAKCG L  + +VF  + + + ISW
Sbjct: 458 SASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISW 517

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            A+ISAY  HG   + +  F+ M   G I+P   TF  VLSACSH G V++G   F+SM 
Sbjct: 518 TAMISAYQLHGCANQVIELFEHMLSEG-IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMK 576

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             +   P  +H +CM+DLLGRAG+LDEA+R I S  ++     W AL  AC  +GNL++G
Sbjct: 577 KIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMG 636

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           R  A  L E E   P  YVLL+N+   +G  EEA  +R L+   GV K+PGCSWI
Sbjct: 637 REAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWI 691



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 178/384 (46%), Gaps = 39/384 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + +LS    +  AL LF Q+  S    P+ ++ S+ L+A A       G QLH+   + G
Sbjct: 217 ITHLSHFNMHLQALSLFNQMRCSGPY-PNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             A   V   ++ +Y    D+ S  RVF                               D
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVF-------------------------------D 304

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFASVLSVC-DAGLLE 205
           +MP+R+L  +N+MI G   N   D  +G+F++ + +  V  +  S +SVLS C + G L 
Sbjct: 305 QMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLN 364

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           FGRQ+H +V K G   L  V+N+L+ MYF C    +  K+F+       D +++NV++ G
Sbjct: 365 FGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR--DVVTWNVLVMG 422

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVM--SACLCP-RVGYQVHAQAMKSGFEAY 322
                + EEA   F  M    + P E +F +V+  SA L     G  +H Q +K G+   
Sbjct: 423 FVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKN 482

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             +  + ITMY+ CG + +A  +F  +++ +++SW  MIS Y         I  +  M S
Sbjct: 483 MCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS 542

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE 406
            GI P   TF  +L++      VE
Sbjct: 543 EGIEPSHVTFVCVLSACSHTGRVE 566



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 167/397 (42%), Gaps = 57/397 (14%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y  A+ +F  +     + P+  S+S+ L+ACAN+    FG Q+H   ++ GL    +V N
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN 386

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           +++ +Y   R                                 D   ++F  + DRD+  
Sbjct: 387 SLMDMYFKCRFF-------------------------------DEGVKLFQCVGDRDVVT 415

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVT 215
           +N ++ G  +N   +     F  M +  +  D  SF++VL S      L  G  +H  + 
Sbjct: 416 WNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQII 475

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVE 273
           K G+   + ++ +LITMY  CG++VDA +VFE  +    DH  IS+  M+      G   
Sbjct: 476 KLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIE----DHNVISWTAMISAYQLHGCAN 531

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSAC-LCPRVGYQV-HAQAMKS------GFEAYTSV 325
           + +  F  ML   + PS +TFV V+SAC    RV   + H  +MK       G E Y  +
Sbjct: 532 QVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACM 591

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVS-WNTMIST---YAQRNLGRSAILAYLEMQ 381
               + +    G +DEA      +  K   S W  ++     Y    +GR A     EM+
Sbjct: 592 ----VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME 647

Query: 382 SVGIRPDEFT-FGSLLASSGFIEMVEMIHAFVFINGI 417
                P  +    ++   SG +E    +   + +NG+
Sbjct: 648 PYN--PGNYVLLANMCTRSGRLEEANEVRRLMGVNGV 682



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 123/269 (45%), Gaps = 42/269 (15%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--K 551
           L++  +  SL+H  QIH  ++ NN  S   L N +I LYAKCG L+ +L +F++     K
Sbjct: 149 LNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFK 208

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
             ++W +LI+  +      +A+S F  M+  G   P+Q TF+++LSA +   +V  G ++
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPY-PNQFTFSSILSASAATMMVLHGQQL 267

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI-----------NSQHIQARSDNW 660
             S+++ +GF       + ++D+  +   +  A RV            NS  +    +N 
Sbjct: 268 -HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNL 326

Query: 661 W------------------------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           +                        ++ SACA  G L  GR + G+++ +    P  YV+
Sbjct: 327 YDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVV-KYGLVPLTYVM 385

Query: 697 --LSNIYAAAGLWEEAANIRELLKRTGVI 723
             L ++Y     ++E   + + +    V+
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVGDRDVV 414


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 198/708 (27%), Positives = 360/708 (50%), Gaps = 76/708 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  ++AL  FV++   +++ PD + +     AC  L+ + FG  +H Y +++GL    
Sbjct: 148 RIGLCEEALMGFVEM-LQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCV 206

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A +VFD++P+R
Sbjct: 207 FVASSLADMY-------------------------------GKCGVLDDARKVFDEIPER 235

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           ++  +NA++ G  +NG  +  I L  +M K  +     + ++ LS   +   +E G+Q H
Sbjct: 236 NVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSH 295

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  + +  Y   G +  A  +F+  +    D +++N+++ G    G 
Sbjct: 296 AIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFD--RMIEKDVVTWNLLISGYVQQGL 353

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNA 328
           VE+A+   + M + +L+   +T  ++MSA       ++G +V    ++  F +   +++ 
Sbjct: 354 VEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLAST 413

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           A+ MY++CG I +A  +F  +  KD++ WNT++S YA+  L   A   + EMQ   + P+
Sbjct: 414 AVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPN 473

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             T+                                N +I ++ +N ++ +A +IF  M 
Sbjct: 474 AITW--------------------------------NLIILSFLRNGQVNEAKEIFSQMQ 501

Query: 449 PR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                 N+++W T++NG + NG   + +    ++  S LRP+ ++++VALS+C+ ++SL 
Sbjct: 502 SSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLH 561

Query: 505 HGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            G+ +HGY+++N    S + +  +++ +YAKCGD++ +  VF   +  D   +NA+ISAY
Sbjct: 562 FGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAY 621

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A +G  KEA++  + ++D G IKPD  TFT++LSAC+HAG V     IF  MV+ +G  P
Sbjct: 622 ALNGNVKEAIALCRRLEDTG-IKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKP 680

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H   M+D+L  AG  D+A R+I     ++ +    +L ++C       L   ++  L
Sbjct: 681 CLEHYGLMVDILASAGETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHL 740

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LE E +    YV +SN YA  G W+E    RE++K   + K PGCSWI
Sbjct: 741 LETEPENSGNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGCSWI 788



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 198/411 (48%), Gaps = 10/411 (2%)

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-- 305
           +A+ +     SY   +  L+  G + EAL    +M    LR     +  ++  C+  R  
Sbjct: 25  DAQAHSPSSASYFHRVSSLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDL 84

Query: 306 -VGYQVHAQAMKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             G Q+HA+ +K+G  +     +    +  Y+ C   + + ++F++L+ +++ SW  +I 
Sbjct: 85  CTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIG 144

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT 419
              +  L   A++ ++EM    I PD F   ++  + G ++       +H +V  +G+  
Sbjct: 145 VKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHD 204

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            + V+++L   Y K   +  A ++F  +  RN++ WN L+ G++ NG   + ++  S++ 
Sbjct: 205 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR 264

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              + P   T+S  LS+ A +  +  GKQ H   + N L     LG + +  Y K G ++
Sbjct: 265 KEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIE 324

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            +  +F+ MIEKD ++WN LIS Y Q G  ++A+   + M+ +  +K D  T + ++SA 
Sbjct: 325 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMR-LENLKYDCVTLSTLMSAA 383

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           +    +  G  +    +  + F       S  +D+    G + +A++V +S
Sbjct: 384 ARTQNLKLGKEVQCYCIR-HSFASDIVLASTAVDMYANCGSIIDAKKVFDS 433



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 46/319 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+H+  Q+     LK D  +LST ++A A  +N   G ++  Y +
Sbjct: 342 NLLISGYVQQGLVEDAIHM-CQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCI 400

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------------- 131
           R    +   +A+T + +Y N   ++  K+VF  +   D+  W T LS             
Sbjct: 401 RHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSGEAFR 460

Query: 132 ----------------------ACTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                 +  + G V+ A E+F +M       +L  +  M+ G  
Sbjct: 461 LFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFPNLVSWTTMMNGLV 520

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + +S    LS C +   L FGR +H  + ++   S  V
Sbjct: 521 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSV 580

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDM 282
            +  +L+ MY  CG++  A  VF   +  +C  +  YN M+   A  G V+EA+   R +
Sbjct: 581 LIETSLVDMYAKCGDINKAEMVF---RSKLCSDLPLYNAMISAYALNGNVKEAIALCRRL 637

Query: 283 LVASLRPSELTFVSVMSAC 301
               ++P  +TF S++SAC
Sbjct: 638 EDTGIKPDNITFTSLLSAC 656


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 192/607 (31%), Positives = 318/607 (52%), Gaps = 15/607 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASV 195
           G + +A  VFD M  R+   +NA+I G  + G     +  + +M     V  D +++  V
Sbjct: 92  GGLGHAVRVFDGMLTRNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPV 151

Query: 196 LSVCDA-GLLEFGRQLHSLV----TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           L  C A G++E GR++   V     +    C V V  AL+ M+  CG + +A  VFE  +
Sbjct: 152 LKACAALGVVEQGRKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESME 211

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVG 307
             V D  ++  M+ G    G   E +   + M     RP  +   +V+ AC      R G
Sbjct: 212 --VRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTG 269

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +H   +K G    T V NA + MY  C ++D A  +F  +  KD++SW+T+I+ ++Q 
Sbjct: 270 TALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQN 329

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
                ++  + EM + G++P+  T  S+L S   + +    + IH F   NG+  +  ++
Sbjct: 330 RRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLA 389

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           +ALI  Y++   IK+A  +F      +++  N++I G+++N      L+    LL   LR
Sbjct: 390 SALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLR 449

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD  T+   L  C + S L  GK++H Y +++N+ S  S+ NA+  +Y KCG L+ +  +
Sbjct: 450 PDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEI 509

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F +M E++T+++N LIS+  +HG  ++A   F  M+  G + PD+ TF A+LS CSH GL
Sbjct: 510 FLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDG-VSPDKVTFVALLSCCSHEGL 568

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           +D G   +DSM+ DY   P ++H SC++DL  R+G LD A   I +       D    L 
Sbjct: 569 IDKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGCLL 628

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           SAC  H  + +  ++A  + E+  + P  ++LLSNIYA+AG+W E   IR +++   + K
Sbjct: 629 SACREHNRMDIAELVAERIFEQNPNDPGYHILLSNIYASAGMWSEVTRIRTMIEERSLKK 688

Query: 725 QPGCSWI 731
           + G S I
Sbjct: 689 RTGNSLI 695



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 166/653 (25%), Positives = 271/653 (41%), Gaps = 91/653 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +  L  +G + +AL  +  +     +  D ++    L ACA L             +
Sbjct: 113 NAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALG-----------VV 161

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G K   +V   I      AR +     VF +    D+++         K G +  A  
Sbjct: 162 EQGRKVQENVEADI------ARGIAKCN-VFVQCALVDMFA---------KCGCLGEARN 205

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           VF+ M  RDL  + AMI G    G     + L + M     R D+   A+V+  C     
Sbjct: 206 VFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKE 265

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH---ISYN 260
           L  G  LH  V K G      V+NAL+ MY  C  +  A  +F     +  DH   IS++
Sbjct: 266 LRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLF-----WSIDHKDVISWS 320

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKS 317
            ++ G +   R   ++  F +M+ + ++P+  T  S+   +S     R G ++H  ++++
Sbjct: 321 TIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRN 380

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G E    +++A I  YS  G I EA ++F    + D+V  N+MI  Y       SA+   
Sbjct: 381 GLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLL 440

Query: 378 LEMQSVGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
             +   G+RPD  T  S+L      S  ++  E+ HA+   + I +   VSNAL   Y K
Sbjct: 441 RALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKEL-HAYAIRHNISSCCSVSNALTDMYCK 499

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              ++ A++IF  M+ RN +T+NTLI+    +G   Q    F  +    + PD+ T    
Sbjct: 500 CGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVAL 559

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           LS C+                   LI K       +  Y      D  LR +N  I  D 
Sbjct: 560 LSCCSH----------------EGLIDK------GLCFY------DSMLRDYN--ISPDK 589

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD----DGT 609
             ++ ++  Y++ G    A S    +Q+V    P+      +LSAC     +D       
Sbjct: 590 EHYSCIVDLYSRSGRLDAAWSFIANLQEV----PEIDVLGCLLSACREHNRMDIAELVAE 645

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDN 659
           RIF+   ND G+     H+  + ++   AG   E  R+   I  + ++ R+ N
Sbjct: 646 RIFEQNPNDPGY-----HI-LLSNIYASAGMWSEVTRIRTMIEERSLKKRTGN 692



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 10/230 (4%)

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA--KNERIKQAYQIFHNMSPRNII 453
           L S   +  V  +HA + + G  T+  ++  L+ AYA  ++  +  A ++F  M  RN  
Sbjct: 51  LQSGPALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSF 110

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
            WN +I G +  G   + LQ + +++    +  D +T    L +CA +  +  G+++   
Sbjct: 111 AWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQEN 170

Query: 513 VLKNNLISKMSLGN-----AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           V + ++   ++  N     A++ ++AKCG L  +  VF  M  +D  +W A+I      G
Sbjct: 171 V-EADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGG 229

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           +  E ++  K M+  G  +PD      V+ AC     +  GT +   +V 
Sbjct: 230 DWLEVMTLLKRMKSEG-FRPDSMILATVIPACGKVKELRTGTALHGCVVK 278


>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
 gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
 gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
          Length = 565

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 177/533 (33%), Positives = 298/533 (55%), Gaps = 14/533 (2%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H     +GF   + + + LI +Y   G+V  A K+F+       D +S+  M+   +  
Sbjct: 35  IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR--DVVSWTAMISRFSRC 92

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
           G   +AL+ F++M    ++ ++ T+ SV+ +C    C + G Q+H    K        V 
Sbjct: 93  GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 152

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A +++Y+ CGK++EA + F  ++E+D+VSWN MI  Y       ++   +  M + G +
Sbjct: 153 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 212

Query: 387 PDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD FTFGSLL +S  +   E+V  +H      G   +  +  +L++AY K   +  A+++
Sbjct: 213 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 272

Query: 444 FHNMSPRNIITWNTLINGF-LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
                 R++++   LI GF   N         F +++  + + DE  +S  L  C  I+S
Sbjct: 273 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 332

Query: 503 LRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +  G+QIHG+ LK++ I   ++LGN++I +YAK G+++ ++  F  M EKD  SW +LI+
Sbjct: 333 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 392

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y +HG  ++A+  +  M+   RIKP+  TF ++LSACSH G  + G +I+D+M+N +G 
Sbjct: 393 GYGRHGNFEKAIDLYNRMEH-ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 451

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQH--IQARSDNWWALFSACAAHGNLRLGRII 679
              E+HLSC++D+L R+GYL+EA  +I S+   +   S  W A   AC  HGN++L ++ 
Sbjct: 452 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 511

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI-KQPGCSWI 731
           A  LL  E  KP  Y+ L+++YAA G W+ A N R+L+K +G   K PG S +
Sbjct: 512 ATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 564



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 228/446 (51%), Gaps = 15/446 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V +A ++FD++  RD+  + AMI+  +  GY    + LF+EMH+ DV+ + +++ S
Sbjct: 60  KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 119

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C D G L+ G Q+H  V K   +  + V +AL+++Y  CG + +A   F+  K   
Sbjct: 120 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER- 178

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+N M+DG  +    + +   F+ ML    +P   TF S++ A +   C  +  ++
Sbjct: 179 -DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 237

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+K GF   +++  + +  Y  CG +  A  +    +++D++S   +I+ ++Q+N  
Sbjct: 238 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 297

Query: 371 RS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT-NIQVSN 425
            S A   + +M  +  + DE    S+L     I  V +   IH F   +  I  ++ + N
Sbjct: 298 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 357

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LI  YAK+  I+ A   F  M  +++ +W +LI G+  +G   + +  ++ +    ++P
Sbjct: 358 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 417

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCS--- 541
           ++ T    LS+C+       G +I+  ++ K+ + ++    + +I + A+ G L+ +   
Sbjct: 418 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 477

Query: 542 LRVFNMMIEKDTISWNALISAYAQHG 567
           +R    ++   + +W A + A  +HG
Sbjct: 478 IRSKEGIVSLSSSTWGAFLDACRRHG 503



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 219/477 (45%), Gaps = 46/477 (9%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           SK  ++     ++  SR G++ DAL LF ++H    +K + ++  + L +C +L     G
Sbjct: 75  SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEG 133

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Q+H    +        V + +LSLY                            + C KM
Sbjct: 134 MQIHGSVEKGNCAGNLIVRSALLSLY----------------------------ARCGKM 165

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
              + A   FD M +RDL  +NAMI G T N   D    LF+ M     + D ++F S+L
Sbjct: 166 ---EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 222

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
                   LE   +LH L  K GF    +++ +L+  Y  CG++ +A K+ E  K    D
Sbjct: 223 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR--D 280

Query: 256 HISYNVMMDGLASVGR-VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVH 311
            +S   ++ G +       +A   F+DM+    +  E+   S++  C       +G Q+H
Sbjct: 281 LLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 340

Query: 312 AQAMKSGFEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
             A+KS    +  ++ N+ I MY+  G+I++A + F  ++EKD+ SW ++I+ Y +    
Sbjct: 341 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNF 400

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIH-AFVFINGIITNIQVSNA 426
             AI  Y  M+   I+P++ TF SLL++   +G  E+   I+   +  +GI    +  + 
Sbjct: 401 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC 460

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +I   A++  +++AY +    S   I++ ++   G  L+     G    S++  ++L
Sbjct: 461 IIDMLARSGYLEEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQL 515



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 1/192 (0%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           +IH     NG  +N+Q+ + LI  Y K   +K A ++F  +S R++++W  +I+ F   G
Sbjct: 34  LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 93

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +    L  F E+   +++ +++T    L SC  +  L+ G QIHG V K N    + + +
Sbjct: 94  YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 153

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+++LYA+CG ++ +   F+ M E+D +SWNA+I  Y  +     + S F+ M   G+ K
Sbjct: 154 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-K 212

Query: 587 PDQATFTAVLSA 598
           PD  TF ++L A
Sbjct: 213 PDCFTFGSLLRA 224


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 201/620 (32%), Positives = 324/620 (52%), Gaps = 16/620 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++     L+   K+G +  A  +FD+MP+R++  +  ++    + G  +    LFR + 
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 182 KLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                 + +   ++L +    DA  L  G  +HS   K G      V + LI  Y  C  
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212

Query: 239 VVDACKVFEEAKGYV-CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           V DA  VF    G V  D + +  M+   +     E A   F  M V+  +P+     SV
Sbjct: 213 VSDAEHVF---NGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269

Query: 298 MSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + A +C P V  G  +H  A+K+  +    V  A + MY+ CG I +A + F  +   D+
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEM--VEMIHAF 411
           +  + MIS YAQ N    A   +L +    + P+E++  S+L A +  +++   + IH  
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  +++ V NAL+  YAK   +  + +IF ++   N ++WNT++ GF  +G   + 
Sbjct: 390 AIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEA 449

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+  +++   + T S  L +CA  +S+RH  QIH  + K+   +   +GN++I  
Sbjct: 450 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDT 509

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG +  +L+VF  ++E+D ISWNA+IS YA HG+  +A+  F  M     ++ +  T
Sbjct: 510 YAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK-SNVESNDIT 568

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F A+LS CS  GLV+ G  +FDSM  D+G  P+ +H +C++ LLGRAG L++A + I   
Sbjct: 569 FVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDI 628

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
                +  W AL S+C  H N+ LGR  A  +LE E    + YVLLSN+YAAAG  ++ A
Sbjct: 629 PSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVA 688

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            +R+ ++  GV K PG SW+
Sbjct: 689 LLRKSMRNIGVRKVPGLSWV 708



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 271/598 (45%), Gaps = 51/598 (8%)

Query: 32  SRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           ++ G ++ A  LF ++    H++    + L+T L     +  A     +H+ A + G   
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQ--FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDH 195

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V + ++  Y     +   + VF+ I   D   WT  +S  ++    + A  VF KM 
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM- 254

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SVCDAGLLEFGR 208
                     ++GC  N                      ++  SVL  +VC   ++  G+
Sbjct: 255 ---------RVSGCKPN---------------------PFALTSVLKAAVCLPSVV-LGK 283

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H    K+       V  AL+ MY  CG++ DA   FE       D I  + M+   A 
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIP--YDDVILLSFMISRYAQ 341

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
             + E+A   F  ++ +S+ P+E +  SV+ AC   +    G Q+H  A+K G E+   V
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA +  Y+ C  +D +  IF+ L++ + VSWNT++  ++Q  LG  A+  + EMQ+  +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
              + T+ S+L   AS+  I     IH  +  +    +  + N+LI  YAK   I+ A +
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 521

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F ++  R+II+WN +I+G+ L+G     L+ F  +  S +  ++ T    LS C+    
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 503 LRHGKQIHGYV-LKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALI 560
           + HG  +   + + + +   M     ++ L  + G L+ +L+ + ++      + W AL+
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKP-DQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           S+   H     A+  F A + +  I+P D+ T+  + +  + AG +D    +  SM N
Sbjct: 642 SSCIIH--KNVALGRFSA-EKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRN 696



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 183/403 (45%), Gaps = 62/403 (15%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           L+  ++  ++S   + A  LF+++  S  L P+ YSLS+ L AC N+    FG Q+H +A
Sbjct: 332 LSFMISRYAQSNQNEQAFELFLRLMRSSVL-PNEYSLSSVLQACTNMVQLDFGKQIHNHA 390

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ G ++   V N ++  Y    D+ S  ++FS +++ +  SW T +   ++ G  + A 
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
            VF +M    +P        CT+                        +++SVL  C    
Sbjct: 451 SVFCEMQAAQMP--------CTQ-----------------------VTYSSVLRACASTA 479

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +    Q+H  + KS F+    + N+LI  Y  CG + DA KVF+       D IS+N +
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMER--DIISWNAI 537

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA---------- 312
           + G A  G+  +AL  F  M  +++  +++TFV+++S  +C   G   H           
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLS--VCSSTGLVNHGLSLFDSMRID 595

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMIST---YAQRN 368
             +K   E YT +    + +    G++++A      +      + W  ++S+   +    
Sbjct: 596 HGIKPSMEHYTCI----VRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651

Query: 369 LGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMI 408
           LGR +    LE++      DE T+    ++ A++G ++ V ++
Sbjct: 652 LGRFSAEKILEIEP----QDETTYVLLSNMYAAAGSLDQVALL 690


>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/561 (32%), Positives = 303/561 (54%), Gaps = 40/561 (7%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H+ +   G +  V  +  L+++    G++  A  +F++      +   YN ++ G +
Sbjct: 56  KLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQP--NKFMYNHLIRGYS 113

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTS 324
           +     ++L+ FR M+ A   P++ TF  V+ AC      ++   VHAQA+K G   +  
Sbjct: 114 NSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHAC 173

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V NA +T Y +C  I  A  +F  + ++ IVSWN+MI+ Y++      AIL + EM  +G
Sbjct: 174 VQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLG 233

Query: 385 IRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALI------------- 428
           +  D FT  SLL++S     +++   +H ++ I G+  +  V+NALI             
Sbjct: 234 VEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAK 293

Query: 429 ------------------SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                             +AYA    ++ A QIF++M  +N+++WN++I   +  G   +
Sbjct: 294 HVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTE 353

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ F  + +S + PD+ TL   LS C+    L  GKQ H Y+  N +   ++L N++I 
Sbjct: 354 AVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLID 413

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L  ++ +F  M EK+ +SWN +I A A HG G+EA+  FK+MQ  G + PD+ 
Sbjct: 414 MYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASG-LYPDEI 472

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT +LSACSH+GLVD G   FD M++ +   P  +H +CM+DLLGR G+L EA  +I  
Sbjct: 473 TFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQK 532

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W AL  AC  +GNL + + I   LLE  +    +YVLLSN+Y+ +  W++ 
Sbjct: 533 MPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDM 592

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             IR+++  +G+ K    S+I
Sbjct: 593 KKIRKIMDDSGIKKCRAISFI 613



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 243/502 (48%), Gaps = 42/502 (8%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           V +    LS C + G + YA  +FD++P  +  +YN +I G + +      + LFR+M  
Sbjct: 71  VVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVS 130

Query: 183 LDVRRDNYSFASVLSVCDAGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                + ++F  VL  C A    +   + H+   K G      V NA++T Y  C  ++ 
Sbjct: 131 AGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILS 190

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF++        +S+N M+ G + +G  +EA++ F++ML   +     T VS++SA 
Sbjct: 191 ARQVFDDISDRTI--VSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSAS 248

Query: 302 L--CP-RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              C   +G  VH   + +G E  + V+NA I MY+ CG +  A  +F ++ +KD+VSW 
Sbjct: 249 SKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWT 308

Query: 359 TMISTYAQRNLGRSA--ILAYLEMQSV-----------------------------GIRP 387
           +M++ YA + L  +A  I  ++ +++V                             G+ P
Sbjct: 309 SMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMP 368

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ T  S+L   +++G + + +  H ++  N I  ++ + N+LI  YAK   ++ A  IF
Sbjct: 369 DDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIF 428

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +N+++WN +I    L+GF  + ++ F  +  S L PDE T +  LS+C+    + 
Sbjct: 429 FGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVD 488

Query: 505 HGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
            G+     ++    IS  +     M+ L  + G L  ++ +   M ++ D + W AL+ A
Sbjct: 489 MGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGA 548

Query: 563 YAQHGEGKEAVSCFKAMQDVGR 584
              +G  + A    K + ++GR
Sbjct: 549 CRIYGNLEIAKQIMKQLLELGR 570



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 205/477 (42%), Gaps = 78/477 (16%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S S     +L LF Q+ S+  + P+ ++    L ACA          +HA A++ G+  +
Sbjct: 113 SNSNDPMKSLLLFRQMVSAGPM-PNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPH 171

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V N IL+ Y   R ++S ++VF +I +  + SW + ++  +KMG  D A         
Sbjct: 172 ACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEA--------- 222

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQL 210
                                 I LF+EM +L V  D ++  S+LS       L+ GR +
Sbjct: 223 ----------------------ILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFV 260

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  +  +G      V NALI MY  CG++  A  VF++      D +S+  M++  A+ G
Sbjct: 261 HLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDK--DVVSWTSMVNAYANQG 318

Query: 271 RVE-------------------------------EALIRFRDMLVASLRPSELTFVSVMS 299
            VE                               EA+  F  M ++ + P + T VS++S
Sbjct: 319 LVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILS 378

Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C       +G Q H     +      ++ N+ I MY+ CG +  A  IF  + EK++VS
Sbjct: 379 CCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVS 438

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFING 416
           WN +I   A    G  AI  +  MQ+ G+ PDE TF  LL++     +V+M     + + 
Sbjct: 439 WNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDM--GRYYFDI 496

Query: 417 IITNIQVSNA------LISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
           +I+  ++S        ++    +   + +A  +   M  + +++ W  L+    + G
Sbjct: 497 MISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYG 553



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 16/377 (4%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           + S   ++  N  +A  S+ G   +A+ LF ++     ++ D+++L + L+A +   N  
Sbjct: 197 DISDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQL-GVEADVFTLVSLLSASSKHCNLD 255

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +H Y +  G++    V N ++ +Y     L   K VF ++ + DV SWT+ ++A  
Sbjct: 256 LGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYA 315

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G V+ A ++F+ MP +++  +N++I    + G     + LF  M    V  D+ +  S
Sbjct: 316 NQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVS 375

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +LS C + G L  G+Q H  +  +  +  V++ N+LI MY  CG +  A  +F       
Sbjct: 376 ILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEK- 434

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----Q 309
            + +S+NV++  LA  G  EEA+  F+ M  + L P E+TF  ++SA  C   G     +
Sbjct: 435 -NVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSA--CSHSGLVDMGR 491

Query: 310 VHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQEK-DIVSWNTMIST--- 363
            +   M S F     V + A  + +    G + EA  +  ++  K D+V W  ++     
Sbjct: 492 YYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRI 551

Query: 364 YAQRNLGRSAILAYLEM 380
           Y    + +  +   LE+
Sbjct: 552 YGNLEIAKQIMKQLLEL 568



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 39/229 (17%)

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P   TL   L  C   SS++  K +H  ++ + L +++     +++L  + GDL  +  +
Sbjct: 37  PTHQTLHHLLDQC---SSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLL 93

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ + + +   +N LI  Y+   +  +++  F+ M   G + P+Q TF  VL AC+    
Sbjct: 94  FDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPM-PNQFTFPFVLKACAAKPF 152

Query: 605 VDDGTRIFDSMVNDYGFIP--------AEDHLSCMLDLLGRAGYLDEAERVINSQH---- 652
             +   I  +     G  P           +++C L L  R  + D ++R I S +    
Sbjct: 153 YWEAV-IVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIA 211

Query: 653 ----------------------IQARSDNWWALFSACAAHGNLRLGRII 679
                                 ++A      +L SA + H NL LGR +
Sbjct: 212 GYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFV 260


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 209/670 (31%), Positives = 338/670 (50%), Gaps = 57/670 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G +LHA ALR G  A     NT+++ Y                            +AC K
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFY----------------------------AACGK 169

Query: 136 MGHVDYACE---VFDKMPDRDLPVYNAMITGCTENG-YEDIG---IGLFREMHKLDVRRD 188
                 AC+   VFD+MP+RD+  +N++++    NG + D     + + R    L+V   
Sbjct: 170 ------ACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVA-- 221

Query: 189 NYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
             S  SV+  C     E FG  +H+L  K G + +V++ NAL+ MY   G+V  + +VF+
Sbjct: 222 --SLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD 279

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CP 304
                  + +S+N  +    + G   + L  FR M   ++ P  +T  S++ A +     
Sbjct: 280 GM--LEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSF 337

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            +G +VH  ++K   +    V+N+ + MY+  G +++A  IF +++++++VSWN MI+  
Sbjct: 338 DLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANL 397

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNI 421
            Q      A     +MQ  G  P+  T  ++L   A    ++M + IHA+    G++ ++
Sbjct: 398 VQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDL 457

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            +SNALI  Y+K  ++  A  IF   S ++ +++NTLI G+  + +  + L  F ++   
Sbjct: 458 FISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSV 516

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            +  D  +   ALS+C  +S  +HGK+IH  +++  L     L N+++ LY K G L  +
Sbjct: 517 GIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTA 576

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            ++FN + +KD  SWN +I  Y  HG+   A   F+ M+  G +  D  ++ AVL+ACSH
Sbjct: 577 SKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDG-LDYDHVSYIAVLAACSH 635

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GLVD G + F  MV      P + H +CM+DLLGRAG L +   +I      A SD W 
Sbjct: 636 GGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWG 694

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL  AC  HGN+ L +  A  L E + +    Y L+ N+YA  G W EA  IR+L+K   
Sbjct: 695 ALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRK 754

Query: 722 VIKQPGCSWI 731
           V K P  SW+
Sbjct: 755 VQKNPAYSWV 764



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 282/589 (47%), Gaps = 51/589 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G + DA    V +  S     ++ SL + + AC   +   FG  +HA A++ GL    +
Sbjct: 198 NGMFHDARRALVSMMRS-GFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVN 256

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +AN ++ +Y                                K G V+ + +VFD M +++
Sbjct: 257 LANALVDMY-------------------------------GKFGDVEASMQVFDGMLEQN 285

Query: 154 LPVYNAMITGCTENG--YEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQL 210
              +N+ I GC  N   Y D+ + +FR+M + +V   + + +S+L ++ + G  + GR++
Sbjct: 286 EVSWNSAI-GCFLNAGFYGDV-LRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREV 343

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    K      + V N+L+ MY   G++  A  +FE+ K    + +S+N M+  L   G
Sbjct: 344 HGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR--NVVSWNAMIANLVQNG 401

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              EA     DM  +   P+ +T V+V+ AC      ++G Q+HA +++ G      +SN
Sbjct: 402 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 461

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MYS CG++  A  IF R  EKD VS+NT+I  Y+Q      ++L + +M+SVGI  
Sbjct: 462 ALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 520

Query: 388 DEFTF-GSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  +F G+L A +     +  + IH  +    +  +  +SN+L+  Y K   +  A +IF
Sbjct: 521 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 580

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + ++ +++ +WNT+I G+ ++G      + F  +    L  D  +    L++C+    + 
Sbjct: 581 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 640

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAY 563
            GK+    ++  N+  +      M+ L  + G L  C+  + +M    ++  W AL+ A 
Sbjct: 641 KGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGAC 700

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQAT-FTAVLSACSHAGLVDDGTRI 611
             HG  + A     A + +  +KP+ +  +T +++  +  G  ++  +I
Sbjct: 701 RIHGNIELAQW---AAEHLFELKPEHSGYYTLMINMYAETGRWNEANKI 746



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 9/346 (2%)

Query: 274 EALIRFRDMLVASLRPSELTF-----VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA 328
           EAL  +  ML +++RP + TF      +  +       G ++HA A++ G  A     N 
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNT 159

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +  Y++CGK  +A  +F  + E+D+VSWN+++S +    +   A  A + M   G   +
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLN 219

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             +  S++ + G  +  +    IHA     G+ T + ++NAL+  Y K   ++ + Q+F 
Sbjct: 220 VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD 279

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  +N ++WN+ I  FL  GF    L+ F ++    + P   TLS  L +   + S   
Sbjct: 280 GMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDL 339

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G+++HGY +K  +   + + N+++ +YAK G L+ +  +F  M +++ +SWNA+I+   Q
Sbjct: 340 GREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQ 399

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           +G   EA      MQ  G   P+  T   VL AC+    +  G +I
Sbjct: 400 NGAETEAFRLVTDMQKSGEC-PNSITLVNVLPACARMASLKMGKQI 444



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 36/278 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +ANL ++G   +A  L   +  S +  P+  +L   L ACA + +   G Q+HA+++
Sbjct: 391 NAMIANLVQNGAETEAFRLVTDMQKSGEC-PNSITLVNVLPACARMASLKMGKQIHAWSI 449

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL     ++N ++ +Y                               +K G +  A  
Sbjct: 450 RRGLMFDLFISNALIDMY-------------------------------SKCGQLSLARN 478

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F++  ++D   YN +I G +++ +    + LF++M  + +  D  SF   LS C +  +
Sbjct: 479 IFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSV 537

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G+++H ++ +   S    + N+L+ +Y   G +V A K+F +      D  S+N M+
Sbjct: 538 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKK--DVASWNTMI 595

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            G    G+++ A   F  M    L    +++++V++AC
Sbjct: 596 LGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAAC 633


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 201/620 (32%), Positives = 324/620 (52%), Gaps = 16/620 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++     L+   K+G +  A  +FD+MP+R++  +  ++    + G  +    LFR + 
Sbjct: 95  DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154

Query: 182 KLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
                 + +   ++L +    DA  L  G  +HS   K G      V + LI  Y  C  
Sbjct: 155 WEGHEVNQFVLTTMLKLAIAMDAAGLAGG--VHSCAWKLGHDHNAFVGSGLIDAYSLCSL 212

Query: 239 VVDACKVFEEAKGYV-CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           V DA  VF    G V  D + +  M+   +     E A   F  M V+  +P+     SV
Sbjct: 213 VSDAEHVF---NGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSV 269

Query: 298 MSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + A +C P V  G  +H  A+K+  +    V  A + MY+ CG I +A + F  +   D+
Sbjct: 270 LKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDV 329

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EMIHAF 411
           +  + MIS YAQ N    A   +L +    + P+E++  S+L A +  +++   + IH  
Sbjct: 330 ILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNH 389

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               G  +++ V NAL+  YAK   +  + +IF ++   N ++WNT++ GF  +G   + 
Sbjct: 390 AIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEA 449

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+  +++   + T S  L +CA  +S+RH  QIH  + K+   +   +GN++I  
Sbjct: 450 LSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDT 509

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG +  +L+VF  ++E+D ISWNA+IS YA HG+  +A+  F  M     ++ +  T
Sbjct: 510 YAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNK-SNVESNDIT 568

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F A+LS CS  GLV+ G  +FDSM  D+G  P+ +H +C++ LLGRAG L++A + I   
Sbjct: 569 FVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDI 628

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
                +  W AL S+C  H N+ LGR  A  +LE E    + YVLLSN+YAAAG  ++ A
Sbjct: 629 PSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVA 688

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            +R+ ++  GV K PG SW+
Sbjct: 689 LLRKSMRNIGVRKVPGLSWV 708



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 148/598 (24%), Positives = 271/598 (45%), Gaps = 51/598 (8%)

Query: 32  SRSGHYQDALHLFVQIH-SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           ++ G ++ A  LF ++    H++    + L+T L     +  A     +H+ A + G   
Sbjct: 138 AQRGDFEAAAALFRRLRWEGHEVNQ--FVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDH 195

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V + ++  Y     +   + VF+ I   D   WT  +S  ++    + A  VF KM 
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM- 254

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SVCDAGLLEFGR 208
                     ++GC  N                      ++  SVL  +VC   ++  G+
Sbjct: 255 ---------RVSGCKPNP---------------------FALTSVLKAAVCLPSVV-LGK 283

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +H    K+       V  AL+ MY  CG++ DA   FE       D I  + M+   A 
Sbjct: 284 GIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIP--YDDVILLSFMISRYAQ 341

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
             + E+A   F  ++ +S+ P+E +  SV+ AC   +    G Q+H  A+K G E+   V
Sbjct: 342 SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFV 401

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA +  Y+ C  +D +  IF+ L++ + VSWNT++  ++Q  LG  A+  + EMQ+  +
Sbjct: 402 GNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQM 461

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
              + T+ S+L   AS+  I     IH  +  +    +  + N+LI  YAK   I+ A +
Sbjct: 462 PCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALK 521

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F ++  R+II+WN +I+G+ L+G     L+ F  +  S +  ++ T    LS C+    
Sbjct: 522 VFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGL 581

Query: 503 LRHGKQIHGYV-LKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALI 560
           + HG  +   + + + +   M     ++ L  + G L+ +L+ + ++      + W AL+
Sbjct: 582 VNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALL 641

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKP-DQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           S+   H     A+  F A + +  I+P D+ T+  + +  + AG +D    +  SM N
Sbjct: 642 SSCIIH--KNVALGRFSA-EKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRN 696



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 183/403 (45%), Gaps = 62/403 (15%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           L+  ++  ++S   + A  LF+++  S  L P+ YSLS+ L AC N+    FG Q+H +A
Sbjct: 332 LSFMISRYAQSNQNEQAFELFLRLMRSSVL-PNEYSLSSVLQACTNMVQLDFGKQIHNHA 390

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ G ++   V N ++  Y    D+ S  ++FS +++ +  SW T +   ++ G  + A 
Sbjct: 391 IKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEAL 450

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
            VF +M    +P        CT+                        +++SVL  C    
Sbjct: 451 SVFCEMQAAQMP--------CTQ-----------------------VTYSSVLRACASTA 479

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +    Q+H  + KS F+    + N+LI  Y  CG + DA KVF+       D IS+N +
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMER--DIISWNAI 537

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA---------- 312
           + G A  G+  +AL  F  M  +++  +++TFV+++S  +C   G   H           
Sbjct: 538 ISGYALHGQAADALELFDRMNKSNVESNDITFVALLS--VCSSTGLVNHGLSLFDSMRID 595

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMIST---YAQRN 368
             +K   E YT +    + +    G++++A      +      + W  ++S+   +    
Sbjct: 596 HGIKPSMEHYTCI----VRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVA 651

Query: 369 LGRSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMI 408
           LGR +    LE++      DE T+    ++ A++G ++ V ++
Sbjct: 652 LGRFSAEKILEIEP----QDETTYVLLSNMYAAAGSLDQVALL 690


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 186/545 (34%), Positives = 291/545 (53%), Gaps = 21/545 (3%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G QLH  +TK GF     + N LI MY  CG +  A +VF   +    + +S+  +M
Sbjct: 233 LRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGMRDR--NVVSWTALM 290

Query: 264 DGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGF 319
            G    G     L    +M  AS   P+E T  + + AC        G  +H   +++G+
Sbjct: 291 VGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGY 350

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           E +  V+++ + +YS  G+I +A  +F  A L  + + +WN MIS YA    GR A+L +
Sbjct: 351 EEHYVVASSLVLLYSKGGRIGDARRVFDCAGLG-RGLATWNAMISGYAHAGHGRDALLVF 409

Query: 378 LEMQSVGI------RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIIT--NIQVSNA 426
            EM+          +PDEFTF SLL + G +        +HA +  +G  T  N  ++ A
Sbjct: 410 REMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFSTASNAILAGA 469

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+  Y K  R+  A Q+F  +  +N I W T++ G    G  ++ L+ F     S  R D
Sbjct: 470 LVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEALELFRRFWRSGARAD 529

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            + LS  +   A  + +  G+Q+H Y +K+   + +S GN+++ +Y KCG  D + R+F 
Sbjct: 530 AHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMYLKCGLPDEAERMFR 589

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            +  ++ +SW  +I+   +HG G+EAV+ F+ M+  G ++PD+ T+ A+LSACSHAGLVD
Sbjct: 590 EIPARNVVSWTTMINGLGKHGLGREAVAMFEEMR-AGGVEPDEVTYLALLSACSHAGLVD 648

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +  R F  +  D    P  +H +CM+DLLGRAG L EA  +I +  ++     W  L SA
Sbjct: 649 ECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 708

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H ++ +GR    +LL  + D P  YV LSN++A AG W E   +R+ ++R G+ KQ 
Sbjct: 709 CRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKVRDAMRRRGLKKQG 768

Query: 727 GCSWI 731
           GCSW+
Sbjct: 769 GCSWV 773



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 28/462 (6%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFA 193
           K G +D A EVF  M DR++  + A++ G  ++G     + L  EM    +   + Y+ +
Sbjct: 264 KCGELDMAGEVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLS 323

Query: 194 SVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           + L  C    D G    G  +H L  ++G+     V ++L+ +Y   G + DA +VF+ A
Sbjct: 324 ASLKACCVTEDMGA---GVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCA 380

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL------RPSELTFVSVMSAC-- 301
            G      ++N M+ G A  G   +AL+ FR+M           +P E TF S++ AC  
Sbjct: 381 -GLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGG 439

Query: 302 -LCPRVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              PR G QVHA    SGF   ++  ++ A + MY  CG++  A  +F RL+ K+ + W 
Sbjct: 440 LGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWT 499

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFIN 415
           T++  +AQ      A+  +      G R D     S+   LA    +E    +H +   +
Sbjct: 500 TVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKS 559

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
              T++   N+++  Y K     +A ++F  +  RN+++W T+ING   +G   + +  F
Sbjct: 560 PAGTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMF 619

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAK 534
            E+    + PDE T    LS+C+    +   ++    + ++  +   +   A M+ L  +
Sbjct: 620 EEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGR 679

Query: 535 CGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGE---GKEA 572
            G+L  +  +   M  + T+  W  L+SA   H +   G+EA
Sbjct: 680 AGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREA 721



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 178/384 (46%), Gaps = 44/384 (11%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G     L L  ++ ++ +  P+ Y+LS +L AC    +   G  +H   +R G + +  V
Sbjct: 297 GDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVV 356

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           A++++ LY     +   +RVF                 C  +G              R L
Sbjct: 357 ASSLVLLYSKGGRIGDARRVFD----------------CAGLG--------------RGL 386

Query: 155 PVYNAMITGCTENGYEDIGIGLFREM------HKLDVRRDNYSFASVLSVCDA-GLLEFG 207
             +NAMI+G    G+    + +FREM      H+   + D ++FAS+L  C   G    G
Sbjct: 387 ATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREG 446

Query: 208 RQLHSLVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            Q+H+ +  SGFS   + +   AL+ MY  CG +  A +VFE  +    + I +  ++ G
Sbjct: 447 AQVHAAMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERK--NAIQWTTVVVG 504

Query: 266 LASVGRVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
            A  G+V EAL  FR    +  R       + V V++       G QVH   +KS     
Sbjct: 505 HAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTD 564

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            S  N+ + MY  CG  DEA  +F  +  +++VSW TMI+   +  LGR A+  + EM++
Sbjct: 565 VSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRA 624

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE 406
            G+ PDE T+ +LL++     +V+
Sbjct: 625 GGVEPDEVTYLALLSACSHAGLVD 648



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 128/309 (41%), Gaps = 54/309 (17%)

Query: 463 LLNGFP-------VQGLQ--------HFSELLMSELRPD--------------------- 486
           LLNG+P       VQ LQ         FSE L S L PD                     
Sbjct: 153 LLNGYPPFRGRSNVQLLQCINRSTSLPFSEPLASTLHPDCVDICTRLLCTNPVAFPFPTN 212

Query: 487 ----EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
                  ++  L + A+ SSLR G Q+HG + K    S   LGN +I +YAKCG+LD + 
Sbjct: 213 PMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAG 272

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF  M +++ +SW AL+  + QHG+    +     M+      P++ T +A L AC   
Sbjct: 273 EVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVT 332

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
             +  G  I    V   G+   E+H    S ++ L  + G + +A RV +   +      
Sbjct: 333 EDMGAGVGIHGLCVRT-GY---EEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLAT 388

Query: 660 WWALFS--ACAAHGN---LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW--EEAAN 712
           W A+ S  A A HG    L    +        +Q +P  +   S + A  GL    E A 
Sbjct: 389 WNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQ 448

Query: 713 IRELLKRTG 721
           +   +  +G
Sbjct: 449 VHAAMAASG 457



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 103/271 (38%), Gaps = 68/271 (25%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G   +AL LF +   S   + D + LS+ +   A+      G Q+H Y +++     
Sbjct: 506 AQEGQVMEALELFRRFWRS-GARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTD 564

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
               N+I+ +Y         +R+F EI   +V SWTT                       
Sbjct: 565 VSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTT----------------------- 601

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQL 210
                   MI G  ++G     + +F EM    V  D  ++ ++LS C  AGL++  R+ 
Sbjct: 602 --------MINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRR- 652

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
                                 YF+C  +     V  +A+ Y C       M+D L   G
Sbjct: 653 ----------------------YFSC--IRRDRTVRPKAEHYAC-------MVDLLGRAG 681

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            + EA    R M    + P+   + +++SAC
Sbjct: 682 ELREARDLIRTM---PMEPTVGVWQTLLSAC 709


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 215/710 (30%), Positives = 351/710 (49%), Gaps = 44/710 (6%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS +GH ++AL  + ++    ++  +  + +T ++ C +L +   G Q+ ++ + +GL+ 
Sbjct: 120 LSSNGHLEEALGYYRRMRRE-RIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQR 178

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              VAN+++S+  N                               +G V  A ++F +M 
Sbjct: 179 QVSVANSLISMLGN-------------------------------LGRVHDAEKLFYRME 207

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVC-DAGLLEFGR 208
           +RD   +NA+++  +  G       +F +M +  + R D  +  S++SVC  +  + +G 
Sbjct: 208 ERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVCASSDYVSYGS 267

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            +HSL  ++G    + VVNAL+ MY + G + DA  +F        D IS+N M+     
Sbjct: 268 GVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNMSRR--DLISWNTMISSYVQ 325

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
            G   +AL     +L  +  P  +TF S + AC  P     G  VHA  ++        V
Sbjct: 326 NGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHNLLV 385

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            N+ ITMY  C  I++A  IF  +   D+VS N +I +YA    G  A+  +  M+   +
Sbjct: 386 GNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDGTKAMQVFFWMRRGEV 445

Query: 386 RPDEFT----FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + +  T     GS  +S+        +HA+    G +++  VSN+LI+ YAK   ++ + 
Sbjct: 446 KLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSN 505

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  +  R++++WN +I   + +G   + L+ F ++       D   L+  +SS A ++
Sbjct: 506 NVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLA 565

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           SL  G Q+HG  LK  L +   + NA + +Y KCG +D  L++      +    WN LIS
Sbjct: 566 SLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLIS 625

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            YA++G  KEA   FK M  VGR  PD  TF  +LSACSHAGLVD G   ++SM + +G 
Sbjct: 626 GYARYGYFKEAEETFKHMISVGRT-PDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGV 684

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P   H  C++D+LGR G   EAE+ I    +      W +L S+   H NL +GR  A 
Sbjct: 685 SPGIKHCVCIVDILGRLGRFAEAEKFIEDMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAK 744

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE +    S YVLLSN+YA +  W +   +R  +K   + K P CSW+
Sbjct: 745 RLLELDPFDDSAYVLLSNLYATSARWSDVDRVRSHMKTINLNKIPACSWL 794



 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 179/633 (28%), Positives = 300/633 (47%), Gaps = 58/633 (9%)

Query: 58  YSLSTTLAACANLRNA-AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           ++L++ + AC       A G  +HA   +AGL    ++   +L LY + + ++  +R+F 
Sbjct: 44  FALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFW 103

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           E+   +V SWT  + A +  GH++ A                               +G 
Sbjct: 104 EMPERNVVSWTALMVALSSNGHLEEA-------------------------------LGY 132

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMY 233
           +R M +  +  +  +FA+V+S+C  G LE    G Q+ S V  SG    VSV N+LI+M 
Sbjct: 133 YRRMRRERIACNANAFATVVSLC--GSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISML 190

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSEL 292
            N G V DA K+F   +    D +S+N ++   +  G   ++   F DM     LR    
Sbjct: 191 GNLGRVHDAEKLFYRMEER--DTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  S++S C        G  VH+  +++G  +Y  V NA + MYSS GK+ +A  +F  +
Sbjct: 249 TLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLFWNM 308

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
             +D++SWNTMIS+Y Q      A+    ++      PD  TF S L   +S G +    
Sbjct: 309 SRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGR 368

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           M+HA      +  N+ V N+LI+ Y K   I+ A +IF  M   ++++ N LI  + +  
Sbjct: 369 MVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLE 428

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR-HGKQIHGYVLKNNLISKMSLG 525
              + +Q F  +   E++ +  T+   L S    + LR +G  +H Y +    +S   + 
Sbjct: 429 DGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVS 488

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG-- 583
           N++IT+YAKCGDL+ S  VF  +I +  +SWNA+I+A  QHG G+E++  F  M+  G  
Sbjct: 489 NSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNG 548

Query: 584 --RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
              I   +   ++   A    G+   G  +   + ND   + A       +D+ G+ G +
Sbjct: 549 LDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAA------MDMYGKCGKM 602

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           DE  +++    I+ +   W  L S  A +G  +
Sbjct: 603 DEMLKMLPDPAIRPQQ-CWNTLISGYARYGYFK 634



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 157/539 (29%), Positives = 283/539 (52%), Gaps = 23/539 (4%)

Query: 149 MPD--RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF 206
           MPD  R    +   I+GC   G +     + R M +  V    ++ AS+++ C+    E 
Sbjct: 1   MPDDHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACER--WEE 58

Query: 207 GRQ----LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           GR     +H+L  K+G    V +  AL+ +Y +  +V+DA ++F E      + +S+  +
Sbjct: 59  GRACGAAIHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPER--NVVSWTAL 116

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGF 319
           M  L+S G +EEAL  +R M    +  +   F +V+S C  L   V G QV +  + SG 
Sbjct: 117 MVALSSNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGL 176

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +   SV+N+ I+M  + G++ +A  +F R++E+D VSWN ++S Y+   L   +   + +
Sbjct: 177 QRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSD 236

Query: 380 MQSVGI-RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G+ R D  T  SL+   ASS ++     +H+     G+ + I V NAL++ Y+   
Sbjct: 237 MRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAG 296

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           ++  A  +F NMS R++I+WNT+I+ ++ NG  +  L+   +LL +   PD  T S AL 
Sbjct: 297 KLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALG 356

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +C+   +L  G+ +H   L+ +L   + +GN++IT+Y KC  ++ + R+F +M   D +S
Sbjct: 357 ACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVS 416

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
            N LI +YA   +G +A+  F  M+  G +K +  T   +L + + +  + +      + 
Sbjct: 417 CNILIGSYAVLEDGTKAMQVFFWMRR-GEVKLNYITIVNILGSFTSSNDLRNYGLPLHAY 475

Query: 616 VNDYGFIPAEDHLS-CMLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGN 672
               GF+ ++D++S  ++ +  + G L+ +  V   Q I  RS  +W A+ +A   HG+
Sbjct: 476 TIHAGFL-SDDYVSNSLITMYAKCGDLESSNNVF--QRIINRSVVSWNAMIAANVQHGH 531



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 199/457 (43%), Gaps = 46/457 (10%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N S+  L+  N  +++  ++G+  DAL    Q+  +++  PD  + S+ L AC++     
Sbjct: 307 NMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNE-GPDRMTFSSALGACSSPGALM 365

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +HA  L+  L     V N+++++Y     +   +R+F  + N DV S    + +  
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGS-- 423

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                 YA                       E+G + + +  F  M + +V+ +  +  +
Sbjct: 424 ------YA---------------------VLEDGTKAMQV--FFWMRRGEVKLNYITIVN 454

Query: 195 VLS--VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +L        L  +G  LH+    +GF     V N+LITMY  CG++  +  VF+     
Sbjct: 455 ILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINR 514

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQ 309
               +S+N M+      G  EE+L  F DM         +     M   ++      G Q
Sbjct: 515 SV--VSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQ 572

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +K G    + V NAA+ MY  CGK+DE   +      +    WNT+IS YA+   
Sbjct: 573 LHGLGLKCGLGNDSHVVNAAMDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGY 632

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSN 425
            + A   +  M SVG  PD  TF +LL++   +G ++  ++  ++   + G+   I+   
Sbjct: 633 FKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCV 692

Query: 426 ALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLIN 460
            ++    +  R  +A +   +M   P ++I W +L++
Sbjct: 693 CIVDILGRLGRFAEAEKFIEDMPVLPNDLI-WRSLLS 728


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 181/544 (33%), Positives = 286/544 (52%), Gaps = 42/544 (7%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML--V 284
           N+L++     G V D  ++F        D +SYN ++ G +  G    A   +  +L   
Sbjct: 81  NSLLSALARAGLVRDMERLFTSLPQR--DAVSYNALLAGFSRAGAHARAAGAYVALLRDE 138

Query: 285 ASLRPSELTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID- 340
           A +RPS +T    V V SA     +G QVH Q ++ GF AY    +  + MY+  G I  
Sbjct: 139 AGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGD 198

Query: 341 ------------------------------EACMIFARLQEKDIVSWNTMISTYAQRNLG 370
                                         EA  +F  ++E+D ++W TM++   Q  L 
Sbjct: 199 ARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLE 258

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNAL 427
             A+  +  M++ G+  D++TFGS+L + G +  +E    IHA++       N+ V +AL
Sbjct: 259 SEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSAL 318

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y+K   ++ A  +F  M  +NII+W  +I G+  NG   + ++ FSE+    ++PD+
Sbjct: 319 VDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +TL   +SSCA ++SL  G Q H   L + L   +++ NA++TLY KCG ++ + R+F+ 
Sbjct: 379 FTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDE 438

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M   D +SW AL+  YAQ G+ KE +  F+ M   G +KPD  TF  VLSACS +GLVD 
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKG-VKPDGVTFIGVLSACSRSGLVDK 497

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F SM  D+  +P +DH +CM+DL  R+G+L +AE  I        +  W  L SAC
Sbjct: 498 GRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSAC 557

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
              G++ +G+  A  LL+ +   P+ YVLL +++A+ G W + A +R  ++   V K+PG
Sbjct: 558 RLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPG 617

Query: 728 CSWI 731
           CSWI
Sbjct: 618 CSWI 621



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 245/533 (45%), Gaps = 45/533 (8%)

Query: 79  LHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +HA  LR      P ++ NT+L+ Y ++  L   +RVF  +   ++ +  + LSA  + G
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG----IGLFREMHKLDVRRDNYSFA 193
            V     +F  +P RD   YNA++ G +  G         + L R+  +  VR    + +
Sbjct: 92  LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRD--EAGVRPSRITMS 149

Query: 194 SVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG- 251
            V+ V  A G    GRQ+H  + + GF       + L+ MY   G + DA +VF+E +G 
Sbjct: 150 GVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGK 209

Query: 252 --YVC--------------------------DHISYNVMMDGLASVGRVEEALIRFRDML 283
              +C                          D I++  M+ GL   G   EAL  FR M 
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269

Query: 284 VASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
              +   + TF S+++AC        G Q+HA   ++ +E    V +A + MYS C  + 
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
            A  +F R+  K+I+SW  MI  Y Q   G  A+  + EMQ  GI+PD+FT GS+++S  
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389

Query: 401 FIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            +  +E     H    ++G+   + VSNAL++ Y K   I+ A+++F  MS  + ++W  
Sbjct: 390 NLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 449

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKN 516
           L+ G+   G   + +  F ++L   ++PD  T    LS+C+R   +  G+   H     +
Sbjct: 450 LVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDH 509

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGE 568
           +++        MI LY++ G L  +      M    D   W  L+SA    G+
Sbjct: 510 DIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 210/424 (49%), Gaps = 13/424 (3%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P   ++S  +   + L + A G Q+H   LR G  AY    + ++ +Y     +   +
Sbjct: 141 VRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF E++  +V    T ++   +   V  A  +F+ + +RD   +  M+TG T+NG E  
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESE 260

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + +FR M    V  D Y+F S+L+ C A   LE G+Q+H+ +T++ +   V V +AL+ 
Sbjct: 261 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVD 320

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  C +V  A  VF        + IS+  M+ G    G  EEA+  F +M    ++P +
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWK--NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378

Query: 292 LTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            T  SV+S+C        G Q H  A+ SG   Y +VSNA +T+Y  CG I++A  +F  
Sbjct: 379 FTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDE 438

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM- 404
           +   D VSW  ++  YAQ    +  I  + +M S G++PD  TF  +L++   SG ++  
Sbjct: 439 MSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKG 498

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR--NIITWNTLINGF 462
               H+    + I+        +I  Y+++  +KQA +    M PR  +   W TL++  
Sbjct: 499 RSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQM-PRCPDAFGWATLLSAC 557

Query: 463 LLNG 466
            L G
Sbjct: 558 RLRG 561


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 190/617 (30%), Positives = 314/617 (50%), Gaps = 15/617 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREM 180
           D+   T  +S     G +D A  VFD +P  D   +  +I     N  + DI +G +  M
Sbjct: 36  DLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDI-VGFYNRM 94

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                  DN  F+ VL  C ++   + GR++H  + K G +    V   L+ MY  CG +
Sbjct: 95  RVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEI 153

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             +  VF+E      +  S++ M+ G       ++ L+ F  M    +  +++T   ++ 
Sbjct: 154 ECSRSVFDENLDR--NVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVH 211

Query: 300 ACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC        G  +H   +K G E  + +  A + +Y+ CG + +A  +F  L   DIVS
Sbjct: 212 ACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVS 271

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVF 413
           W  MI  Y Q      A+  +L+ + V + P++ T  S+ +S   +  + +   IH    
Sbjct: 272 WTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSI 331

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G    I V+N+L+  YAK +  + A  +F  +S R+++ WN++I+ F  NG   + L+
Sbjct: 332 KLGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALE 390

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLY 532
            F ++ M  + PD  TL   LS+CA +++L+ G   H Y +K  L+S  + +G A++T Y
Sbjct: 391 LFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFY 450

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           AKCGD + +  +F+ M +K T++W+A+IS Y   G G+ ++S F  M     +KP++  F
Sbjct: 451 AKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLK-AELKPNEEIF 509

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
           T++LSACSH G++ +G R+F  +  DY  +P+  H +CM+DLL RAG L EA   I    
Sbjct: 510 TSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMP 569

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
           +Q     + A    C  H    LG +    +LE        YVL+ N+YA+   W +   
Sbjct: 570 VQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQ 629

Query: 713 IRELLKRTGVIKQPGCS 729
           +REL+K+ G++K PGCS
Sbjct: 630 VRELMKQRGLMKTPGCS 646



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 216/488 (44%), Gaps = 55/488 (11%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           QD L LF ++     ++ +  +L   + AC  L     G  LH Y ++ G++   ++   
Sbjct: 185 QDGLVLFNRMRE-ELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTA 243

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L LY     +   + VF E+   D+ SWT                              
Sbjct: 244 LLDLYAKCGVVRDARSVFDELHGIDIVSWT------------------------------ 273

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTK 216
            AMI G T+NG  +  + LF +  ++ V  ++ + ASV S C   L L  GR +H L  K
Sbjct: 274 -AMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIK 332

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G    + V N+L+  Y  C    DA  VFE       D +++N ++   +  G   EAL
Sbjct: 333 LGSRDPI-VTNSLVDFYAKCQMNRDARYVFETISDR--DVVAWNSIISAFSQNGSAYEAL 389

Query: 277 IRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITM 332
             F  M + S+ P  +T VSV+SAC      +VG   HA A+K G   +   V  A +T 
Sbjct: 390 ELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTF 449

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG  + A +IF  + +K  V+W+ MIS Y  +  GR ++  + +M    ++P+E  F
Sbjct: 450 YAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIF 509

Query: 393 GSLLASSGFIEMV-EMIHAFVFI---NGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
            S+L++     M+ E    F  I     ++ + +    ++   A+  R+K+A      M 
Sbjct: 510 TSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMP 569

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDE---YTLSVAL-SSCARIS 501
            +  ++    + G  L+G  +       EL    M EL P +   Y L   L +S AR S
Sbjct: 570 VQPDVS----LFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWS 625

Query: 502 SLRHGKQI 509
            ++  +++
Sbjct: 626 KVKQVREL 633



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 112/277 (40%), Gaps = 65/277 (23%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  S++G   +AL LF Q+     L PD  +L + L+ACA+L     G+  HAYA+
Sbjct: 373 NSIISAFSQNGSAYEALELFHQMRMGSVL-PDAVTLVSVLSACASLNALQVGSSFHAYAV 431

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL +                               +VY  T  L+   K G  + A  
Sbjct: 432 KRGLLS------------------------------SNVYVGTALLTFYAKCGDAESARV 461

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD M  +    ++AMI+G    G     + +F +M K +++ +   F S+LS C     
Sbjct: 462 IFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACS---- 517

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
                 H+ +   G+         L TM     N+V + K              Y  M+D
Sbjct: 518 ------HTGMIGEGWR--------LFTMICQDYNLVPSTK-------------HYTCMVD 550

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            LA  GR++EAL   + M V   +P    F + +  C
Sbjct: 551 LLARAGRLKEALDFIQKMPV---QPDVSLFGAFLHGC 584


>gi|297799986|ref|XP_002867877.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313713|gb|EFH44136.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 760

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 204/727 (28%), Positives = 358/727 (49%), Gaps = 83/727 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++ L R G  + AL ++ ++     L P  ++L++ L+AC+ +++   G + H
Sbjct: 89  VVSWNNMISVLVRKGFEEKALDVYGRMVGDGFL-PSRFTLASVLSACSKVQDGVIGMRCH 147

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             A++ GL     V N +LS+Y                            + C  M  VD
Sbjct: 148 GVAVKTGLDKNIFVGNALLSMY----------------------------AKCGFM--VD 177

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-- 198
           Y   VF+ + + +   +  +I+G          + +FR M +  V+ D    +++LS+  
Sbjct: 178 YGVRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISV 237

Query: 199 ----CDAGLLE-----FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
               CD+ L E      G+Q+HSL  + GF   + + N+L+ +Y    ++  A  +F E 
Sbjct: 238 PREGCDS-LSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEM 296

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ 309
                + +S+N+M+ G     R ++++   + M  +   P+E+T +S++ AC        
Sbjct: 297 PEV--NVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSGFEPNEVTCISILGACF------- 347

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
                                      G ++    IF  + +  + +WN M+S Y+    
Sbjct: 348 -------------------------RSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEH 382

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNA 426
              AI  + +MQ   ++PD  T   +L+S     F+E  + IH          +  + + 
Sbjct: 383 YEEAINNFRQMQFQNLKPDRTTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSG 442

Query: 427 LISAYAKNERIKQAYQIFHN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELR 484
           LI+ Y++ E+++    IF + ++  +I  WN++I+G   N    + L  F  +   S L 
Sbjct: 443 LIAVYSECEKMEICECIFDDCINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLL 502

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P+E T ++ L SC+R+ SL HG+Q HG V+K+  +S   +  A+  +Y KCG+++ + + 
Sbjct: 503 PNETTYAIVLGSCSRLCSLVHGRQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQF 562

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ +  K+T+ WN +I  YA +G G EAV  ++ M   G  KPD  TF +VL+ACSH+GL
Sbjct: 563 FDTVSRKNTVIWNEMIHGYAHNGRGDEAVDLYREMISAGE-KPDGITFVSVLTACSHSGL 621

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           VD G  I  SM  D+G  P  DH  C++D LGRAG L++AE +  +   ++ S  W  L 
Sbjct: 622 VDTGLEILSSMQRDHGIEPELDHYICIVDCLGRAGRLEDAETLAEATPYKSSSVLWEILL 681

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           S+C  +G++ L R +A  L+  +    + YVLLSN Y++   W++AA ++EL+ +  V K
Sbjct: 682 SSCRVYGDVSLARRVAEKLMHLDPQNSAAYVLLSNTYSSVRQWDDAAALQELMNKNRVHK 741

Query: 725 QPGCSWI 731
            PG SWI
Sbjct: 742 TPGHSWI 748



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 280/584 (47%), Gaps = 56/584 (9%)

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL +  ++ N +L LY    D    +++F E+   DVYSW  FL+   K+G ++ ACE
Sbjct: 20  RTGLNSDTYLCNRLLDLYIEFGDGDYARKLFDEMSLRDVYSWNAFLTFRCKVGDLEEACE 79

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA--- 201
           VFD MP+RD+  +N MI+     G+E+  + ++  M         ++ ASVLS C     
Sbjct: 80  VFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFLPSRFTLASVLSACSKVQD 139

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYN 260
           G++  G + H +  K+G    + V NAL++MY  CG +VD   +VFE       + +S+ 
Sbjct: 140 GVI--GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYGVRVFESLSEP--NEVSFT 195

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-------------VG 307
            ++ GLA   +V EA+  FR M    ++   +   +++S  + PR             +G
Sbjct: 196 TVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISV-PREGCDSLSEIYGNVLG 254

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
            Q+H+ A++ GF     ++N+ + +Y+    ++ A +IF  + E ++VSWN MI+ + Q 
Sbjct: 255 KQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEVNVVSWNIMIAGFGQE 314

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
                +I     M+  G  P+E T  S+L                               
Sbjct: 315 YRSDKSIEYLKRMRDSGFEPNEVTCISILG------------------------------ 344

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
             A  ++  ++   +IF+ +   ++  WN +++G+       + + +F ++    L+PD 
Sbjct: 345 --ACFRSGDVETGRRIFNTIPQPSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDR 402

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            TLSV LSSCAR+  L  GKQIHG  ++        + + +I +Y++C  ++    +F+ 
Sbjct: 403 TTLSVILSSCARLRFLEGGKQIHGVAIRTETSEDSHIVSGLIAVYSECEKMEICECIFDD 462

Query: 548 MI-EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            I E D   WN++IS   ++    +A+  F+ M     + P++ T+  VL +CS    + 
Sbjct: 463 CINELDIACWNSMISGLRRNTLDTKALMLFRRMHQTSVLLPNETTYAIVLGSCSRLCSLV 522

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            G R F   V   G++      + + D+  + G ++ A +  ++
Sbjct: 523 HG-RQFHGQVVKSGYVSDSFVETAVTDMYCKCGEIESARQFFDT 565



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 26/384 (6%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA +T     G ++EAC +F  + E+D+VSWN MIS   ++     A+  Y  M   G  
Sbjct: 62  NAFLTFRCKVGDLEEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALDVYGRMVGDGFL 121

Query: 387 PDEFTFGSLLAS-----SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK-NERIKQA 440
           P  FT  S+L++      G I M    H      G+  NI V NAL+S YAK    +   
Sbjct: 122 PSRFTLASVLSACSKVQDGVIGM--RCHGVAVKTGLDKNIFVGNALLSMYAKCGFMVDYG 179

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS----- 495
            ++F ++S  N +++ T+I+G       ++ +  F  +    ++ D   LS  LS     
Sbjct: 180 VRVFESLSEPNEVSFTTVISGLARENKVLEAVHMFRLMCEKGVQVDCVCLSNILSISVPR 239

Query: 496 -SCARISSLRH---GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             C  +S +     GKQIH   L+   + ++ L N+++ +YAK  D++ +  +F  M E 
Sbjct: 240 EGCDSLSEIYGNVLGKQIHSLALRRGFVGELHLNNSLLEIYAKNKDMNGAELIFTEMPEV 299

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           + +SWN +I+ + Q     +++   K M+D G  +P++ T  ++L AC  +G V+ G RI
Sbjct: 300 NVVSWNIMIAGFGQEYRSDKSIEYLKRMRDSG-FEPNEVTCISILGACFRSGDVETGRRI 358

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACA 668
           F+++       P+    + ML       + +EA    R +  Q+++        + S+CA
Sbjct: 359 FNTIPQ-----PSVSAWNAMLSGYSNYEHYEEAINNFRQMQFQNLKPDRTTLSVILSSCA 413

Query: 669 AHGNLRLGRIIAGLLLEREQDKPS 692
               L  G+ I G+ +  E  + S
Sbjct: 414 RLRFLEGGKQIHGVAIRTETSEDS 437


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 182/580 (31%), Positives = 310/580 (53%), Gaps = 15/580 (2%)

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG 218
           MI  C   G     + L+ EM +  +  D +   S+++ C     LE GR+LH  +  +G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +  AL+ MY  CG++ DA +VFE  +  + D  +++ ++   A  GR E A++ 
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGME--IKDLFAWSSIIAAYARAGRGEMAVVL 118

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           +R M+   + P+ +TF   +  C        G  +H + + S       + ++ + MY  
Sbjct: 119 YRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLK 178

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEFTFGS 394
           C ++ EA  +F  ++ +++ S+  MIS Y Q      A+  +  M  V  I P+ +TF +
Sbjct: 179 CDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFAT 238

Query: 395 LLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L +    G +E    +H  +   G  TN+ V NAL++ Y K     +A ++F +M+ RN
Sbjct: 239 ILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARN 298

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +I+W ++I  +  +G P + L  F  +   ++ P   + S AL++CA + +L  G++IH 
Sbjct: 299 VISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHH 355

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            V++ NL S   +  +++++YA+CG LD + RVFN M  +D  S NA+I+A+ QHG  K+
Sbjct: 356 RVVEANLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
           A+  ++ M+  G I  D  TF +VL ACSH  LV D      S+V D+G +P  +H  CM
Sbjct: 415 ALRIYRKMEQEG-IPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCM 473

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
           +D+LGR+G L +AE ++ +   QA +  W  L S C  HG+L  G   A  + E    + 
Sbjct: 474 VDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAET 533

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             YV LSN+YAAA  +++A  +R+ ++  GV +    S+I
Sbjct: 534 LPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYI 573



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 134/553 (24%), Positives = 241/553 (43%), Gaps = 52/553 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   R G    AL L+ ++     +  D + +++ +AAC  L+    G +LH + +  G
Sbjct: 2   IAACVREGRPLQALELWGEM-EERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +    +   +L +Y     L   KRVF  ++  D+++W++ ++A  + G  + A     
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMA----- 115

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLE 205
                                     + L+R M    V  +  +FA  L  C   AGL +
Sbjct: 116 --------------------------VVLYRRMIAEGVEPNVVTFACALGGCASVAGLAD 149

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +H  +  S       + ++L+ MY  C  +V+A KVFE  K    +  SY  M+  
Sbjct: 150 -GRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKAR--NVRSYTAMISA 206

Query: 266 LASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEA 321
               G   EAL  F  M  V ++ P+  TF +++ A         G +VH      GF+ 
Sbjct: 207 YVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDT 266

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V NA +TMY  CG   EA  +F  +  ++++SW +MI+ YAQ    + A+  +  M 
Sbjct: 267 NVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD 326

Query: 382 SVGIRPDEFTFGSLLASSGFI----EMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              + P   +F S L +   +    E  E+ H  V  N  + + Q+  +L+S YA+   +
Sbjct: 327 ---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAN--LASPQMETSLLSMYARCGSL 381

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F+ M  R+  + N +I  F  +G   Q L+ + ++    +  D  T    L +C
Sbjct: 382 DDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVAC 441

Query: 498 ARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTIS 555
           +  S +   +  +   V+ + ++  +     M+ +  + G L D    V  M  + D ++
Sbjct: 442 SHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVA 501

Query: 556 WNALISAYAQHGE 568
           W  L+S   +HG+
Sbjct: 502 WMTLLSGCKRHGD 514


>gi|5262217|emb|CAB45843.1| putative protein [Arabidopsis thaliana]
 gi|7268873|emb|CAB79077.1| putative protein [Arabidopsis thaliana]
          Length = 740

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 209/729 (28%), Positives = 360/729 (49%), Gaps = 89/729 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++ L R G  + AL ++ ++     L P  ++L++ L+AC+ + +  FG + H
Sbjct: 69  VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCH 127

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH-V 139
             A++ GL     V N +LS+Y                                K G  V
Sbjct: 128 GVAVKTGLDKNIFVGNALLSMY-------------------------------AKCGFIV 156

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV- 198
           DY   VF+ +   +   Y A+I G          + +FR M +  V+ D+   +++LS+ 
Sbjct: 157 DYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS 216

Query: 199 -----CDAGLL----EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
                CD+       E G+Q+H L  + GF   + + N+L+ +Y    ++  A  +F E 
Sbjct: 217 APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEM 276

Query: 250 KGYVCDHISYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
                + +S+N+M+ G     R +   E L R RD   +  +P+E+T +SV+ AC     
Sbjct: 277 PEV--NVVSWNIMIVGFGQEYRSDKSVEFLTRMRD---SGFQPNEVTCISVLGACF---- 327

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
                                         G ++    IF+ + +  + +WN M+S Y+ 
Sbjct: 328 ----------------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 359

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQV 423
                 AI  + +MQ   ++PD+ T   +L+S     F+E  + IH  V    I  N  +
Sbjct: 360 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 419

Query: 424 SNALISAYAKNERIKQAYQIFHN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
            + LI+ Y++ E+++ +  IF + ++  +I  WN++I+GF  N    + L  F  +  + 
Sbjct: 420 VSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 479

Query: 483 -LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            L P+E + +  LSSC+R+ SL HG+Q HG V+K+  +S   +  A+  +Y KCG++D +
Sbjct: 480 VLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSA 539

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            + F+ ++ K+T+ WN +I  Y  +G G EAV  ++ M   G  KPD  TF +VL+ACSH
Sbjct: 540 RQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSH 598

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           +GLV+ G  I  SM   +G  P  DH  C++D LGRAG L++AE++  +   ++ S  W 
Sbjct: 599 SGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 658

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L S+C  HG++ L R +A  L+  +    + YVLLSN Y++   W+++A ++ L+ +  
Sbjct: 659 ILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNR 718

Query: 722 VIKQPGCSW 730
           V K PG SW
Sbjct: 719 VHKTPGQSW 727



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 160/580 (27%), Positives = 284/580 (48%), Gaps = 52/580 (8%)

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           G+K+  ++ N +L LY    D    ++VF E+   DVYSW  FL+   K+G +  ACEVF
Sbjct: 2   GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVF 61

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE- 205
           D MP+RD+  +N MI+     G+E+  + +++ M         ++ ASVLS C   L   
Sbjct: 62  DGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGV 121

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMD 264
           FG + H +  K+G    + V NAL++MY  CG +VD   +VFE       + +SY  ++ 
Sbjct: 122 FGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP--NEVSYTAVIG 179

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-------------VGYQVH 311
           GLA   +V EA+  FR M    ++   +   +++S    PR             +G Q+H
Sbjct: 180 GLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSIS-APREGCDSLSEIYGNELGKQIH 238

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A++ GF     ++N+ + +Y+    ++ A +IFA + E ++VSWN MI  + Q     
Sbjct: 239 CLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSD 298

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
            ++     M+  G +P+E T  S+L                                 A 
Sbjct: 299 KSVEFLTRMRDSGFQPNEVTCISVLG--------------------------------AC 326

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            ++  ++   +IF ++   ++  WN +++G+       + + +F ++    L+PD+ TLS
Sbjct: 327 FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 386

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI-E 550
           V LSSCAR+  L  GKQIHG V++  +     + + +I +Y++C  ++ S  +F+  I E
Sbjct: 387 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINE 446

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
            D   WN++IS +  +    +A+  F+ M     + P++ +F  VLS+CS    +  G R
Sbjct: 447 LDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHG-R 505

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
            F  +V   G++      + + D+  + G +D A +  ++
Sbjct: 506 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDA 545



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 22/382 (5%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA +T     G + EAC +F  + E+D+VSWN MIS   ++     A++ Y  M   G  
Sbjct: 42  NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 101

Query: 387 PDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERI-KQAYQ 442
           P  FT  S+L A S  ++ V     H      G+  NI V NAL+S YAK   I     +
Sbjct: 102 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 161

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS------S 496
           +F ++S  N +++  +I G       ++ +Q F  +    ++ D   LS  LS       
Sbjct: 162 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 221

Query: 497 CARISSL---RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           C  +S +     GKQIH   L+      + L N+++ +YAK  D++ +  +F  M E + 
Sbjct: 222 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 281

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN +I  + Q     ++V     M+D G  +P++ T  +VL AC  +G V+ G RIF 
Sbjct: 282 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETGRRIFS 340

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAH 670
           S+       P+    + ML       + +EA    R +  Q+++        + S+CA  
Sbjct: 341 SIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 395

Query: 671 GNLRLGRIIAGLLLEREQDKPS 692
             L  G+ I G+++  E  K S
Sbjct: 396 RFLEGGKQIHGVVIRTEISKNS 417


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 204/664 (30%), Positives = 310/664 (46%), Gaps = 117/664 (17%)

Query: 184 DVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +VRR    +A+ L  C   +       R +H+ +  SGF     ++N LI +Y    ++V
Sbjct: 8   NVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLV 67

Query: 241 DACKVFEEAKGY-------------------------------VCDHISYNVMMDGLASV 269
            A  +F+E +                                 + D + YN M+ G +  
Sbjct: 68  SAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHN 127

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTSV 325
                A+  FRD+L    RP   TF SV+ A        +   Q+H   +KSG    TSV
Sbjct: 128 NDGFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSV 187

Query: 326 SNAAITMYSSC----------------------------------------GKIDEACMI 345
            NA ++++  C                                        G++D A   
Sbjct: 188 LNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQF 247

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
              + EK +V+WN MIS Y        A+  + +M  +GI+ DEFT+ S+L   A++GF 
Sbjct: 248 LDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFF 307

Query: 403 EMVEMIHAF-----------------------------------VFINGIITNIQVSNAL 427
              + +HA+                                   VF    + ++   NA+
Sbjct: 308 LHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAI 367

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S Y    RI +A   F  M  RN++TW  +I+G   NGF  + L+ F+ +      P +
Sbjct: 368 LSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCD 427

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           Y  + A+ +CA +++L HG+Q+H  +++    S +S GNA+IT+YAKCG ++ +  +F  
Sbjct: 428 YAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLT 487

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M   D++SWNA+I+A  QHG G +A+  F+ M     I PD+ TF  VLS CSHAGLV++
Sbjct: 488 MPYLDSVSWNAMIAALGQHGHGAQALELFELMLKED-ILPDRITFLTVLSTCSHAGLVEE 546

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G R F SM   YG  P EDH + M+DLL RAG   EA+ +I +  ++     W AL + C
Sbjct: 547 GHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGC 606

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGN+ LG   A  L E        YVLLSN+YA  G W++ A +R+L++  GV K+PG
Sbjct: 607 RIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPG 666

Query: 728 CSWI 731
           CSWI
Sbjct: 667 CSWI 670



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 174/671 (25%), Positives = 299/671 (44%), Gaps = 126/671 (18%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +HA+ + +G K   ++ N ++ +Y  + DLVS   +F EI+ PD+ + TT ++A +  G+
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 139 VDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            + A E+F   P   RD   YNAMITG + N      I LFR++ +   R DN++F SVL
Sbjct: 97  SNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVL 156

Query: 197 SVCDAGLLEFGRQ---LHSLVTKSGFSCLVSVVNALITMYFNCGN---------VVDACK 244
               A ++E  +Q   +H  V KSG   + SV+NAL++++  C +         +  A K
Sbjct: 157 GAL-ALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARK 215

Query: 245 VFEEAK------------GYVCDH-----------------ISYNVMMDGLASVGRVEEA 275
           +F+E              GYV +                  +++N M+ G    G   EA
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEA 275

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS----GFEAYTSVSNA 328
           L  FR M +  ++  E T+ SV+SAC        G QVHA  +++      +   SV+NA
Sbjct: 276 LEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNA 335

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY------------------------ 364
             T+Y  CGK+DEA  +F ++  KD+VSWN ++S Y                        
Sbjct: 336 LATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTW 395

Query: 365 -------AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMV--EMIHAFVFI 414
                  AQ   G  ++  +  M+S G  P ++ F G+++A +    ++    +HA +  
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G  +++   NALI+ YAK   ++ A+ +F  M   + ++WN +I     +G   Q L+ 
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           F  +L  ++ PD  T    LS+C+    +  G   H Y              +M  LY  
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYF------------KSMSGLYGI 560

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           C   D   R+ +++                + G+  EA    K M +   ++P    + A
Sbjct: 561 CPGEDHYARMIDLL---------------CRAGKFSEA----KDMIETMPVEPGPPIWEA 601

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH----LSCMLDLLGRAGYLDEAERVINS 650
           +L+ C   G +D G +  + +   +  +P  D     LS M   +GR   + +  +++  
Sbjct: 602 LLAGCRIHGNMDLGIQAAERL---FELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRD 658

Query: 651 QHIQARSDNWW 661
           + ++      W
Sbjct: 659 KGVKKEPGCSW 669



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 251/549 (45%), Gaps = 67/549 (12%)

Query: 11  AGNSNTSKELLLKLNISL-------ANLSRSGHYQD---ALHLFVQIHSSHKLKPDIYSL 60
           AGNSN ++E+     + +       A ++   H  D   A+ LF  +   +  +PD ++ 
Sbjct: 94  AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDL-LRNGFRPDNFTF 152

Query: 61  STTLAACANL-RNAAFGNQLHAYALRAGLKAYPHVANTILSLY---------KNARDLVS 110
           ++ L A A +  +     Q+H   +++G      V N +LS++          ++  + +
Sbjct: 153 TSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAA 212

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
            +++F E+   D  SWTT ++   + G +D A +  D M ++ +  +NAMI+G   +G+ 
Sbjct: 213 ARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFF 272

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS----GFSCLVSV 225
              + +FR+M+ L ++ D +++ SVLS C +AG    G+Q+H+ + ++         +SV
Sbjct: 273 LEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSV 332

Query: 226 VNALITMYFNCGNVVDACKVF------------------------EEAKGYVCDH----- 256
            NAL T+Y+ CG V +A +VF                        +EAK +  +      
Sbjct: 333 NNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL 392

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +++ VM+ GLA  G  EE+L  F  M      P +  F   + AC        G Q+HAQ
Sbjct: 393 LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQ 452

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ GF++  S  NA ITMY+ CG ++ A  +F  +   D VSWN MI+   Q   G  A
Sbjct: 453 LVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQA 512

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF----INGIITNIQVSNALIS 429
           +  +  M    I PD  TF ++L++     +VE  H +      + GI         +I 
Sbjct: 513 LELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMID 572

Query: 430 AYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
              +  +  +A  +   M   P   I W  L+ G  ++G    G+Q    L   EL P  
Sbjct: 573 LLCRAGKFSEAKDMIETMPVEPGPPI-WEALLAGCRIHGNMDLGIQAAERLF--ELMPQH 629

Query: 488 YTLSVALSS 496
               V LS+
Sbjct: 630 DGTYVLLSN 638


>gi|357483095|ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513169|gb|AES94792.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 985

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 192/622 (30%), Positives = 338/622 (54%), Gaps = 21/622 (3%)

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED--IGIGLFREMH 181
           + +   +S  ++ G ++ A +VFDKMP R    YNA++   +    +       L+ +M 
Sbjct: 318 FLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQME 377

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            + +R  N +  S+L      G L  G  LH+   K GF   + V  +L+ MY +C ++ 
Sbjct: 378 NMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLS 437

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A  VF +      D++++N ++ G     ++E+ +  F +M+     P+  TF  ++SA
Sbjct: 438 SAESVFCDMNER--DNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSA 495

Query: 301 CLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           C   R+     G  +HA+ +         + NA + MY + G    A MIF+R+++ D+V
Sbjct: 496 C--SRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLV 553

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMV---EMIHAF 411
           SWN+MIS Y +   G  A+  +++++++   +PD++T+  +++++G        + +H  
Sbjct: 554 SWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQ 613

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V   G + ++ V + L+S Y KN+  + A ++F ++  ++ I W  +I G+      +  
Sbjct: 614 VIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGA 673

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           ++ FSE+       D+Y LS  LS CA ++ LR G+ IH Y  K     +MS+  ++I +
Sbjct: 674 IRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDM 733

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAK G+L+ +  VF+ +   D   WN+++  ++ HG   +A+  F+ +   G + PDQ T
Sbjct: 734 YAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLV-PDQVT 792

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN-S 650
           F ++LSACSH+ LV+ G  +++ M +  G +P   H SCM+ LL RA  L+EAE +IN S
Sbjct: 793 FLSLLSACSHSRLVEQGKLLWNYM-SSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKS 851

Query: 651 QHIQARSDNWWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
            +++   + W  L SAC  + NL++G R    +L    +D P++ +LLSN+YAAAG W+E
Sbjct: 852 PYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTL-ILLSNLYAAAGRWDE 910

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
            A IR  +K   + K+PG SWI
Sbjct: 911 VAEIRRNMKGLIMEKEPGLSWI 932



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/585 (25%), Positives = 262/585 (44%), Gaps = 49/585 (8%)

Query: 25  NISLANLSR--SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           N  LA  SR    H   A +L+ Q+ +   L+P   ++++ L A +   +   G  LHA 
Sbjct: 352 NALLAAYSRVSEQHCVYAFNLYTQMENM-GLRPSNMTITSLLQAASLHGDLLIGLLLHAK 410

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
           +L+ G      V  ++L++Y +  DL S + VF +                         
Sbjct: 411 SLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCD------------------------- 445

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
                 M +RD   +N++I G  +N   + G+ LF EM  +      Y+F  +LS C   
Sbjct: 446 ------MNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRL 499

Query: 203 LLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
              F GR +H+ V     S  + + NAL+ MY N G+   A  +F   + +  D +S+N 
Sbjct: 500 KDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKW--DLVSWNS 557

Query: 262 MMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
           M+ G       E+A+  F  +      +P + T+  ++SA     C   G  +H Q +K+
Sbjct: 558 MISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKA 617

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF     V +  ++MY    + + A  +F  +  KD + W  MI+ Y++   G  AI  +
Sbjct: 618 GFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCF 677

Query: 378 LEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN 434
            EM       D++    +L+   ++ ++   E+IH + +  G    + VS +LI  YAKN
Sbjct: 678 SEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKN 737

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
             ++ AY +F  +S  ++  WN+++ GF  +G     L+ F E++   L PD+ T    L
Sbjct: 738 GNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLL 797

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM--MIEKD 552
           S+C+    +  GK +  Y+    L+      + M+TL ++   L+ +  + N    +E +
Sbjct: 798 SACSHSRLVEQGKLLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSPYVEDN 857

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
              W  L+SA   +   K  V   +A ++V R   +      +LS
Sbjct: 858 VELWRTLLSACVINKNLKVGV---RAAEEVLRFNAEDGPTLILLS 899



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 163/293 (55%), Gaps = 10/293 (3%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           +A   KS F     + N  I+MYS CG +++A  +F ++ ++  VS+N +++ Y++ +  
Sbjct: 310 NASGSKSAF-----LYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQ 364

Query: 371 RS--AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSN 425
               A   Y +M+++G+RP   T  SLL ++   G + +  ++HA     G + +I V  
Sbjct: 365 HCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQT 424

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +L++ Y+    +  A  +F +M+ R+ + WN+LI G+L N    +G+  F E++     P
Sbjct: 425 SLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTP 484

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             YT  + LS+C+R+     G+ IH  V+  N+   + L NA++ +Y   GD   +  +F
Sbjct: 485 TVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIF 544

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + M + D +SWN++IS Y ++ +G++A++ F  ++ +   KPD  T+  ++SA
Sbjct: 545 SRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISA 597


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 199/629 (31%), Positives = 344/629 (54%), Gaps = 28/629 (4%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE--NGYEDIGIGL 176
           Q+P VY+    LS   + G +  +  VFDKMP R +  YNA++   +     +    + L
Sbjct: 46  QSPFVYN--NILSMYARCGSLTDSHLVFDKMPRRTIVSYNALLAAYSRASPNHAISALEL 103

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFS--CLVSVVNALIT 231
           + +M    +R  + +F S+L    + LLE   FG  LH+   K G +  CL +   +L+ 
Sbjct: 104 YTQMVTNGLRPSSTTFTSLLQA--SSLLEHWWFGSSLHAKGFKLGLNDICLQT---SLLN 158

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY NCG++  A  VF +      DH+++N ++ G     ++EE +  F  M+     P++
Sbjct: 159 MYSNCGDLSSAELVFWDMVDR--DHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQ 216

Query: 292 LTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            T+  V+++C      R G  +HA  +         + NA + MY + G +  A  IF+R
Sbjct: 217 FTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSR 276

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFIEMV-- 405
           ++  D+VSWN+MI+ Y++   G  A+  ++++Q +   +PD++T+  +++++G       
Sbjct: 277 MENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIISATGVFPSSSY 336

Query: 406 -EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            + +HA V   G   ++ V + L+S Y KN     A+++F ++S ++++ W  +I G+  
Sbjct: 337 GKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSK 396

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
               +  ++ F +++      D+Y LS  +++CA ++ LR G+ IH Y +K     +MS+
Sbjct: 397 MTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSV 456

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             ++I +YAK G L+ +  VF+ + E D   WN+++  Y+ HG  +EA+  F+ +   G 
Sbjct: 457 SGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGL 516

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           I PDQ TF ++LSACSH+ LV+ G  +++ M N  G IP   H SCM+ L  RA  L+EA
Sbjct: 517 I-PDQVTFLSLLSACSHSRLVEQGKFLWNYM-NSIGLIPGLKHYSCMVTLFSRAALLEEA 574

Query: 645 ERVIN-SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE-REQDKPSVYVLLSNIYA 702
           E +IN S +I+   + W  L SAC  + N ++G   A  +L  + +D P++ VLLSN+YA
Sbjct: 575 EEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGPTL-VLLSNLYA 633

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AA  W++ A IR  ++   + K PG SWI
Sbjct: 634 AARKWDKVAEIRRNMRGLMLDKYPGLSWI 662



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 282/595 (47%), Gaps = 56/595 (9%)

Query: 18  KELLLKLNISLANLSRSG--HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           +  ++  N  LA  SR+   H   AL L+ Q+  ++ L+P   + ++ L A + L +  F
Sbjct: 76  RRTIVSYNALLAAYSRASPNHAISALELYTQM-VTNGLRPSSTTFTSLLQASSLLEHWWF 134

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G+ LHA   + GL     +  ++L++Y N  DL S + VF          W         
Sbjct: 135 GSSLHAKGFKLGLNDIC-LQTSLLNMYSNCGDLSSAELVF----------W--------- 174

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
                        M DRD   +N++I G  +N   + GI LF +M  +      +++  V
Sbjct: 175 ------------DMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMV 222

Query: 196 LSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L+ C + L ++  GR +H+ V     S  + + NAL+ MY N GN+  A ++F   +   
Sbjct: 223 LNSC-SRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGNMQTAYRIFSRMEN-- 279

Query: 254 CDHISYNVMMDGLASVGRVEEAL---IRFRDMLVASLRPSELTFVSVMSAC-LCPRVGY- 308
            D +S+N M+ G +     E+A+   ++ ++M     +P + T+  ++SA  + P   Y 
Sbjct: 280 PDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFP--KPDDYTYAGIISATGVFPSSSYG 337

Query: 309 -QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             +HA+ +K+GFE    V +  ++MY    + D A  +F  +  KD+V W  MI+ Y++ 
Sbjct: 338 KSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDVVLWTEMITGYSKM 397

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVS 424
             G  AI  + +M   G   D++    ++   A+   +   E+IH +    G    + VS
Sbjct: 398 TDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVS 457

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            +LI  YAKN  ++ AY +F  +S  ++  WN+++ G+  +G   + LQ F E+L   L 
Sbjct: 458 GSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLI 517

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD+ T    LS+C+    +  GK +  Y+    LI  +   + M+TL+++   L+ +  +
Sbjct: 518 PDQVTFLSLLSACSHSRLVEQGKFLWNYMNSIGLIPGLKHYSCMVTLFSRAALLEEAEEI 577

Query: 545 FNM--MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            N    IE +   W  L+SA   +   K  +    A ++V R+K +      +LS
Sbjct: 578 INKSPYIEDNLELWRTLLSACVINKNFKVGI---HAAEEVLRLKAEDGPTLVLLS 629



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 173/303 (57%), Gaps = 11/303 (3%)

Query: 305 RVGYQVHAQAMKSGFEAYTS----VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
           R   Q+HA  + +   A+TS    V N  ++MY+ CG + ++ ++F ++  + IVS+N +
Sbjct: 27  REARQLHALILTTT-TAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNAL 85

Query: 361 ISTY--AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFIN 415
           ++ Y  A  N   SA+  Y +M + G+RP   TF SLL +S  +E       +HA  F  
Sbjct: 86  LAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFKL 145

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G+  +I +  +L++ Y+    +  A  +F +M  R+ + WN+LI G+L N    +G+  F
Sbjct: 146 GL-NDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLF 204

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            +++     P ++T  + L+SC+R+   R G+ IH +V+  N+   + L NA++ +Y   
Sbjct: 205 IKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNA 264

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  + R+F+ M   D +SWN++I+ Y+++ +G++A++ F  +Q++   KPD  T+  +
Sbjct: 265 GNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGI 324

Query: 596 LSA 598
           +SA
Sbjct: 325 ISA 327



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 167/370 (45%), Gaps = 55/370 (14%)

Query: 11  AGNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AGN  T+  +        L+  N  +A  S +   + A++LFVQ+      KPD Y+ + 
Sbjct: 264 AGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAG 323

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
            ++A     ++++G  LHA  ++ G +    V +T++S+Y    +  +  RVF  I   D
Sbjct: 324 IISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKD 383

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           V  WT  ++  +KM     A   F +M                             E H+
Sbjct: 384 VVLWTEMITGYSKMTDGICAIRCFFQM---------------------------VHEGHE 416

Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
           +    D+Y  + V++ C +  +L  G  +H    K G+   +SV  +LI MY   G++  
Sbjct: 417 V----DDYVLSGVVNACANLAVLRQGEIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEA 472

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  VF +      D   +N M+ G +  G VEEAL  F ++L   L P ++TF+S++SAC
Sbjct: 473 AYLVFSQVSE--PDLKCWNSMLGGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSAC 530

Query: 302 LCPRVGYQ-------VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ--EK 352
              R+  Q       +++  +  G + Y+ +    +T++S    ++EA  I  +    E 
Sbjct: 531 SHSRLVEQGKFLWNYMNSIGLIPGLKHYSCM----VTLFSRAALLEEAEEIINKSPYIED 586

Query: 353 DIVSWNTMIS 362
           ++  W T++S
Sbjct: 587 NLELWRTLLS 596


>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
 gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
          Length = 564

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 180/570 (31%), Positives = 296/570 (51%), Gaps = 14/570 (2%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFA 193
           K G V+ A  VF+ +       +N M+     NG  D  + LF++M  +  +R D  +F 
Sbjct: 4   KCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVTFV 63

Query: 194 SVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE--AK 250
           +  + C   G LE G+Q HS   +SG    + + +AL+ MY  CG+  +A K+F+    K
Sbjct: 64  TAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVK 123

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
             VC    +NVM+   A  G   EAL  + DM   +L+P  +TF++V+ AC     G  +
Sbjct: 124 NVVC----WNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHACTLES-GRLI 175

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   + +G E    V NA + M+  CG + +A  +F R+  +D++SWN ++S Y Q+   
Sbjct: 176 HQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQGHR 235

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           + A   +  M   G++P+  T+ SLL +   +E +  IH  +   G+  + QV N LI+A
Sbjct: 236 KEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLREIHQELADQGLEQDEQVGNTLITA 295

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K   ++ +  +F  M  R++++W  +I G + +G+  + L  + E+++  +RPD   L
Sbjct: 296 YNKFS-LEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVAL 354

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
             AL +C  + +L  G++IH  V    +++ + +  A++ +Y KCG    +  VF  M  
Sbjct: 355 VCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKT 414

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
               +WN+LI AYAQHG   +A+  ++ M+  G  +PD  T    L ACSH GL+D    
Sbjct: 415 TTVATWNSLIGAYAQHGHATDALKLYERMELSG-TRPDGVTLLCALFACSHLGLLDRARE 473

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            +  MV DY       H  C++DL  RAG++DEAE +I S  ++     W AL +AC AH
Sbjct: 474 FYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTALLNACKAH 533

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
            ++  G   A    E +  + S +V+LS  
Sbjct: 534 NDMERGAWAACKAHELDSRRSSPFVVLSGF 563



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 249/549 (45%), Gaps = 45/549 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ L     +G    AL LF Q+   H ++ D  +  T   AC+ + +   G Q H+  +
Sbjct: 27  NLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVTFVTAATACSLVGSLEEGKQFHSRFV 86

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +GL++   + + ++++Y         +++F  I   +V  W   ++A  + GH   A E
Sbjct: 87  ESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIAAYAQNGHFSEALE 146

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           ++                                  + ++++ D  +F +VL  C    L
Sbjct: 147 LY----------------------------------YDMNLKPDRVTFLNVLHACT---L 169

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           E GR +H  V  +G      V NAL+ M+  CG++ DA +VF+       D IS+N +M 
Sbjct: 170 ESGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIA--FRDVISWNALMS 227

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
                G  +EA   F+ M  A L+P+ +T++S++ AC       ++H +    G E    
Sbjct: 228 VYIQQGHRKEAFELFKRMDKAGLQPNSVTYLSLLPACSSLEQLREIHQELADQGLEQDEQ 287

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V N  IT Y+    ++++  +F R++ + +VSW  MI    +   G  A+  Y EM   G
Sbjct: 288 VGNTLITAYNKF-SLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEG 346

Query: 385 IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +RPD       L +   +E +     IH  V    ++T++ V+ A+++ Y K  +  +A 
Sbjct: 347 VRPDAVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAE 406

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  M    + TWN+LI  +  +G     L+ +  + +S  RPD  TL  AL +C+ + 
Sbjct: 407 AVFQGMKTTTVATWNSLIGAYAQHGHATDALKLYERMELSGTRPDGVTLLCALFACSHLG 466

Query: 502 SLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNAL 559
            L   ++ +  ++++  +  +      ++ L+ + G +D +  +   M  +  IS W AL
Sbjct: 467 LLDRAREFYSGMVEDYQVEAVPAHFGCLVDLFCRAGWIDEAEELIASMPVRPHISAWTAL 526

Query: 560 ISAYAQHGE 568
           ++A   H +
Sbjct: 527 LNACKAHND 535



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 44/426 (10%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEF 390
           MY  CG ++EA  +F  ++     SWN M+  Y     G  A+  + +M  V GIR D  
Sbjct: 1   MYGKCGSVEEARAVFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRV 60

Query: 391 TF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           TF    +  +  G +E  +  H+    +G+ +++ + +AL++ Y +    ++A +IF  +
Sbjct: 61  TFVTAATACSLVGSLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRI 120

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             +N++ WN +I  +  NG   + L+ + ++    L+PD  T    L +C    +L  G+
Sbjct: 121 PVKNVVCWNVMIAAYAQNGHFSEALELYYDM---NLKPDRVTFLNVLHAC----TLESGR 173

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
            IH  V+   L     +GNA++ ++ KCG L  + RVF+ +  +D ISWNAL+S Y Q G
Sbjct: 174 LIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMSVYIQQG 233

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS--------HAGLVDDG----TRIFDSM 615
             KEA   FK M   G ++P+  T+ ++L ACS        H  L D G     ++ +++
Sbjct: 234 HRKEAFELFKRMDKAG-LQPNSVTYLSLLPACSSLEQLREIHQELADQGLEQDEQVGNTL 292

Query: 616 VNDYGFIPAEDHL--------------SCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           +  Y     ED +              +CM+  +   GY   A  +     ++    +  
Sbjct: 293 ITAYNKFSLEDSVAVFERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAV 352

Query: 662 AL---FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS--NIYAAAGLWEEAANIREL 716
           AL     AC +  NL  GR I   L+E       V+V  +  N+Y   G + EA  + + 
Sbjct: 353 ALVCALDACTSVENLAEGRKIH-RLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQG 411

Query: 717 LKRTGV 722
           +K T V
Sbjct: 412 MKTTTV 417


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 193/583 (33%), Positives = 300/583 (51%), Gaps = 45/583 (7%)

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM--YFNCGNVVDACKVF 246
           N+   ++LS C +   +  +Q+HS + K+G       ++ LI        GN+  A  +F
Sbjct: 32  NHPSLTLLSTCKS--FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLF 89

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---C 303
           E  +    +   +N M+ G +       A+  +  ML+  + P+  TF  ++ +C     
Sbjct: 90  ESIEQ--PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI------------------------ 339
            + G Q+H   +K G E+   V  + I MY+  G++                        
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 340 -------DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
                  D+A  +F  +  +D VSWN MI+ YAQ      A+  + EM+   + P+E T 
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            ++L   A SG +E+   + +++  +G+ +N+++ NALI  Y+K   + +A  +F  +  
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           ++II+WN +I G+       + L  F ++  S + P++ T    L +CA + +L  GK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 510 HGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           H Y+ K  L ++  SL  ++I +YAKCG+++ + +VF  M  K   SWNA+IS  A HG 
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
              A+  F+ M+D G  +PD  TF  VLSACSHAGLV+ G + F SMV DY   P   H 
Sbjct: 448 ANMALELFRQMRDEG-FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHY 506

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
            CM+DLLGRAG  DEAE ++ +  ++     W +L  AC  HGN+ LG   A  L E E 
Sbjct: 507 GCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP 566

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + P  YVLLSNIYA AG W++ A IR  L   G+ K PGCS I
Sbjct: 567 ENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSI 609



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 165/578 (28%), Positives = 279/578 (48%), Gaps = 61/578 (10%)

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------ACTKMGHVDYACEVF 146
           H + T+LS  K+ ++L   K++ S+I    +++    LS      A +  G++ YA  +F
Sbjct: 33  HPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLF 89

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLE 205
           + +   +  ++N MI G + +      I  +  M    V  ++Y+F  +L  C   G  +
Sbjct: 90  ESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN--------------------------- 238
            G+Q+H  V K G      V  +LI MY   G                            
Sbjct: 150 EGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYT 209

Query: 239 ----VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
               + DA ++FEE    V D +S+N M+ G A  GR EEAL  F++M  A++ P+E T 
Sbjct: 210 LRGCLDDARRLFEEIP--VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+V+SAC       +G  V +     G  +   + NA I MYS CG +D+A  +F  + E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMI 408
           KDI+SWN MI  Y+  N  + A+  + +MQ   + P++ TF S+L +    G +++ + I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 409 HAFV---FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           HA++   F+   +TN  +  +LI  YAK   I+ A Q+F  M P+++ +WN +I+G  ++
Sbjct: 388 HAYIDKKFLG--LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMH 445

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSL 524
           G     L+ F ++      PD+ T    LS+C+    +  G+Q    ++++  IS K+  
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505

Query: 525 GNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
              MI L  + G  D +  +  NM ++ D   W +L+ A   HG  +  +  F A + + 
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE--LGEFAA-KHLF 562

Query: 584 RIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVNDYG 620
            ++P+      +LS   + AG  DD  RI  + +ND G
Sbjct: 563 ELEPENPGAYVLLSNIYATAGRWDDVARI-RTKLNDKG 599



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 228/458 (49%), Gaps = 22/458 (4%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+ Y+    L +CA +     G Q+H + L+ GL++ P V  +++++Y    +L   +
Sbjct: 128 VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAE 187

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VFS+    D  S+T  ++  T  G +D A  +F+++P RD   +NAMI G  ++G  + 
Sbjct: 188 LVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEE 247

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +  F+EM + +V  +  +  +VLS C  +G LE G  + S +   G    + +VNALI 
Sbjct: 248 ALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307

Query: 232 MYFNCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           MY  CG++  A  +FE     +C  D IS+NVM+ G + +   +EAL  FR M  +++ P
Sbjct: 308 MYSKCGDLDKARDLFEG----ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 290 SELTFVSVMSACL---CPRVGYQVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMI 345
           +++TFVS++ AC       +G  +HA   K       TS+  + I MY+ CG I+ A  +
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           FA ++ K + SWN MIS  A       A+  + +M+  G  PD+ TF  +L++     +V
Sbjct: 424 FAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483

Query: 406 EM----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           E+      + V    I   +Q    +I    +     +A  +  NM  +     +  I G
Sbjct: 484 ELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP----DGAIWG 539

Query: 462 FLLNGFPVQG---LQHFSELLMSELRPDEYTLSVALSS 496
            LL    V G   L  F+   + EL P+     V LS+
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSN 577



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 77/398 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++SG +++AL  F ++  ++ + P+  ++ T L+ACA   +   GN + ++  
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRAN-VAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL +   + N ++ +Y    DL   + +F  I   D+ SW                  
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW------------------ 333

Query: 145 VFDKMPDRDLPVYNAMITGCTE-NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AG 202
                        N MI G +  N Y++  + LFR+M + +V  ++ +F S+L  C   G
Sbjct: 334 -------------NVMIGGYSHMNSYKE-ALALFRKMQQSNVEPNDVTFVSILPACAYLG 379

Query: 203 LLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            L+ G+ +H+ + K        S+  +LI MY  CGN+  A +VF   K       S+N 
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG--SWNA 437

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEA 321
           M+ GLA  G    AL  FR M      P ++TFV V+SAC         HA  ++ G + 
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSAC--------SHAGLVELGRQC 489

Query: 322 YTSVSNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE- 379
           ++S+    +  Y    K+    CMI       D+              LGR+ +    E 
Sbjct: 490 FSSM----VEDYDISPKLQHYGCMI-------DL--------------LGRAGLFDEAEA 524

Query: 380 -MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVF 413
            M+++ ++PD   +GSLL +    G +E+ E     +F
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF 562


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 191/593 (32%), Positives = 309/593 (52%), Gaps = 20/593 (3%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQL 210
           R+   + ++I G  ++   +  + +  EMHK     + ++ + +L  C +     FG+Q 
Sbjct: 4   RNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQF 63

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASV 269
           H  V K GF   V V  +LI MY       DA KVF+      C  +  +N M+   A  
Sbjct: 64  HCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSM---ACKDVRCFNFMILEYARA 120

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVS 326
           G  E+A+  F +ML A L+P++ TF +++SAC   L    G Q    + K GF   TS+ 
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIG 180

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA I MY   G   EA  +F+ + +++++SW  +IS Y +   G+ A+  ++E+   G+ 
Sbjct: 181 NAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVN 240

Query: 387 PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D     ++L        +E+   IH  V   G    + +  AL+  YAK   +  A  +
Sbjct: 241 FDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMV 300

Query: 444 FHNMSPRNIITWNTLINGFLLNGF-----PVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           F  +S + I ++N ++ GF+ N       P+    HF    +  ++PD  T S  LS  A
Sbjct: 301 FDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFR---LDGIKPDMVTFSRLLSLSA 357

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
             S+L  G+  H Y +K    + +S+ NA+IT+YAKCG ++ + R+FN+M + D+ISWNA
Sbjct: 358 NHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNA 417

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +ISAYA HG+G + +  F+ M       PD+ T  ++L AC+++GL  DG  +F+ M   
Sbjct: 418 MISAYALHGQGAKVLLLFEEMIK-KEFAPDEITILSILQACTYSGLFRDGISLFNVMEPK 476

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           YG  P  +H +CM+DLLGRAG+L EA  +IN       +  W  L + C   G+   G++
Sbjct: 477 YGIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDRNFGKL 536

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +  LLE    +   Y+L+SN+YA   + +EAA +R ++    + K+ G SWI
Sbjct: 537 ASKYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWI 589



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 162/649 (24%), Positives = 270/649 (41%), Gaps = 120/649 (18%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
            ++ AL++  ++H S +   + ++ S  L AC++     FG Q H + ++ G      V 
Sbjct: 21  EFESALNIASEMHKSGEALNE-HTCSVILQACSSPDYRIFGQQFHCFVIKCGFDENVVVG 79

Query: 96  NTILSLYKNARDLVSVKRVFSEIQ-----------------------------------N 120
            +++++Y  ++     ++VF  +                                     
Sbjct: 80  TSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNGEKAIRVFINMLNAGLQ 139

Query: 121 PDVYSWTTFLSACT-----------------------------------KMGHVDYACEV 145
           P+ Y++T  +SAC                                    K G    A  +
Sbjct: 140 PNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGNAIINMYGKKGMAREAERM 199

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
           F  M DR+L  + A+I+G T +G     +  F E+H   V  D+    ++L  C +   L
Sbjct: 200 FSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNFDSSLLTTILDGCSECRNL 259

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMM 263
           E G Q+H LV K G++C V++  AL+ +Y  CGN++ A  VF+   G     I S+N ++
Sbjct: 260 ELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVFD---GLSSKRIASFNAIL 316

Query: 264 DGLASVGR--VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSG 318
            G     R   E+ ++ F    +  ++P  +TF  ++S          G   HA A+K+G
Sbjct: 317 AGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTG 376

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           FEA  SV+NA ITMY+ CG I+EA  +F  + + D +SWN MIS YA    G   +L + 
Sbjct: 377 FEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFE 436

Query: 379 EMQSVGIRPDEFTFGSLLAS---SG-FIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
           EM      PDE T  S+L +   SG F + + + +      GI   ++    ++    + 
Sbjct: 437 EMIKKEFAPDEITILSILQACTYSGLFRDGISLFNVMEPKYGIKPLLEHYACMVDLLGRA 496

Query: 435 ERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
             + +A  I  N SP  ++ + W TL+N   L      G ++F +L        +Y L  
Sbjct: 497 GHLSEAMDII-NKSPFSKSTLLWRTLVNVCKL-----CGDRNFGKL------ASKYLL-- 542

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC----GDLDCSLRVFNMM 548
                  +S +  G  I        L+S M  G  M+   AK      DL  S       
Sbjct: 543 ------ELSPVEAGSYI--------LVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSW 588

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           IE D    +  +++   H E  E  +    ++D  R + D A F  + S
Sbjct: 589 IEIDD-KVHHFVASGKDHPESNEIYAELDLLRDDMRWRYDVANFNLIWS 636



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 114/226 (50%), Gaps = 3/226 (1%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RN ITW +LI G+L +      L   SE+  S    +E+T SV L +C+       G
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +Q H +V+K      + +G ++I +Y +      + +VF+ M  KD   +N +I  YA+ 
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G++A+  F  M + G ++P+  TFT ++SAC     +++G + F  +   YGF+    
Sbjct: 121 GNGEKAIRVFINMLNAG-LQPNDYTFTNIISACDGDLGIEEGEQ-FLGLSFKYGFLNETS 178

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
             + ++++ G+ G   EAER+  S        +W AL S     G+
Sbjct: 179 IGNAIINMYGKKGMAREAERMF-SAMTDRNLISWTALISGYTRSGD 223



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 21/218 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SR G  +D + LF        +KPD+ + S  L+  AN      G   HAYA++ G +A 
Sbjct: 323 SRDGE-EDPIVLFNHFRLD-GIKPDMVTFSRLLSLSANHSTLGRGRCYHAYAIKTGFEAD 380

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN ++++Y     +    R+F+ + + D  SW   +SA    G       +F++M  
Sbjct: 381 LSVANAVITMYAKCGSIEEAHRMFNVMNDHDSISWNAMISAYALHGQGAKVLLLFEEMIK 440

Query: 152 RDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS--VCDAGLLE 205
           ++         +++  CT +G    GI LF      +V    Y    +L    C   LL 
Sbjct: 441 KEFAPDEITILSILQACTYSGLFRDGISLF------NVMEPKYGIKPLLEHYACMVDLL- 493

Query: 206 FGRQLH-----SLVTKSGFSCLVSVVNALITMYFNCGN 238
            GR  H      ++ KS FS    +   L+ +   CG+
Sbjct: 494 -GRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGD 530


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 343/698 (49%), Gaps = 55/698 (7%)

Query: 86  AGLKAYPHVANT-------ILSLYKNARDLVSVKRVFSEIQN--PDVYSWTTFLSACTKM 136
           A L  +P V+N        +L L     D+  +K V + I     D++     + A  K+
Sbjct: 59  ALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKLAEDIHLANALIVAYLKL 118

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G V  A +VF  +   ++  Y AMI+G  ++  E   + +F  M    +  + +SF ++L
Sbjct: 119 GMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAIL 178

Query: 197 SVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           +VC   L LE G QLH++V K GF     V NAL+ +Y  CG +    ++F+E      D
Sbjct: 179 TVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHR--D 236

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC--LCPRVGYQVHA 312
             S+N ++  +      E A   FRDM  +   R    T  +++ A   L   VG ++HA
Sbjct: 237 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHA 296

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL--- 369
             +K GFE+  SV NA I  Y+ CG I     +F +++ +D+++W  MI+ Y +  L   
Sbjct: 297 HVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDL 356

Query: 370 ----------------------------GRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
                                       G  A+  +  M   G+   +FT   +L + G 
Sbjct: 357 ALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGL 416

Query: 402 I---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI--FHNMSPRNIITWN 456
           +   ++ + IH F+   G  +N  +  AL+    +  R+  A ++    + S    I W 
Sbjct: 417 LMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWT 476

Query: 457 TLINGFLLNGFPVQGLQHFSE-LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           ++I G+  N  P + +  F +  L   +  D+   +  L  C  ++    GKQIH + LK
Sbjct: 477 SMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALK 536

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           +  +S + +GN++IT+Y+KC ++D +++VFN+M   D +SWN LI+ +  H +G EA+S 
Sbjct: 537 SGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSV 596

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSH--AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           +  M+  G IKPD  TF  ++SA  H  + LVD+  R+F SM   Y   P  +H + ++ 
Sbjct: 597 WSKMEKAG-IKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVG 655

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           +LG  G L+EAE +IN   I+  +  W AL  AC  H N  +G+  A  LL  +   PS 
Sbjct: 656 VLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPST 715

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y+L+SN+Y+A G W  +  +RE ++  G  K PG SWI
Sbjct: 716 YILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 753



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 10/375 (2%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++++ +   Y+ A  LF  +      + D ++LST L A   L +   G ++HA+ +
Sbjct: 241 NTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVI 299

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G ++   V N ++  Y     +  V  +F +++  DV +WT  ++A  + G  D A E
Sbjct: 300 KIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALE 359

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFDKMP R+   YNA+++G  +NG     +  F  M +  V   +++   VL+ C  GLL
Sbjct: 360 VFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC--GLL 417

Query: 205 ---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
              +  +Q+H  + K GF     +  AL+ M   CG + DA K+F +        I +  
Sbjct: 418 MEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTS 477

Query: 262 MMDGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
           M+ G A   + EEA+  F +  L  ++   ++   +V+  C       +G Q+H  A+KS
Sbjct: 478 MICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKS 537

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF +   V N+ ITMYS C  +D+A  +F  +   DIVSWN +I+ +     G  A+  +
Sbjct: 538 GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVW 597

Query: 378 LEMQSVGIRPDEFTF 392
            +M+  GI+PD  TF
Sbjct: 598 SKMEKAGIKPDTVTF 612



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 145/611 (23%), Positives = 262/611 (42%), Gaps = 103/611 (16%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  ++S   + A+ +F ++ SS  ++ + +S    L  C  L +   G QLHA  ++ G
Sbjct: 143 ISGFAKSNRERQAMEIFFRMRSS-GIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMG 201

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
              Y  V+N ++ LY     L SV ++F E+ + D+ SW T +S+  K            
Sbjct: 202 FLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVK------------ 249

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF 206
                             E  YE     LFR+M ++D  R D+++ +++L          
Sbjct: 250 ------------------EMMYER-AFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV 290

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA----------------- 249
           GR++H+ V K GF   +SV+NALI  Y  CG++     +FE+                  
Sbjct: 291 GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYME 350

Query: 250 ------------KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
                       K    + ISYN ++ G    G   +AL  F  M+   +  ++ T   V
Sbjct: 351 FGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGV 410

Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA--CMIFARLQEK 352
           ++AC   +  ++  Q+H   +K GF +   +  A + M + CG++ +A          + 
Sbjct: 411 LNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQS 470

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG---FIEMVEMI 408
             + W +MI  YA+      AI  + + Q  G +  D+    ++L   G   F EM + I
Sbjct: 471 GSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQI 530

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H     +G ++++ V N++I+ Y+K   +  A ++F+ M   +I++WN LI G LL+   
Sbjct: 531 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 590

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + L  +S++  + ++PD  T  +       IS+ RH          +NL+         
Sbjct: 591 DEALSVWSKMEKAGIKPDTVTFVLI------ISAYRHT--------NSNLVD-------- 628

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
                 C  L  S++     I+     + +L+      G  +EA      M     I+P+
Sbjct: 629 -----NCRRLFLSMKTI-YHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMP----IEPE 678

Query: 589 QATFTAVLSAC 599
            + + A+L AC
Sbjct: 679 ASVWRALLDAC 689


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  315 bits (806), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 224/785 (28%), Positives = 380/785 (48%), Gaps = 117/785 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+IY     L  C   R+ + G Q+HA  L+ 
Sbjct: 42  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG--EILQGCVYERDLSTGKQIHARILKN 99

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + +  V FS+++  +V+SW   +    ++G     CE
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG----LCE 155

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                           + G             F EM + ++  DN+   +V   C A   
Sbjct: 156 --------------GALMG-------------FVEMLENEIFPDNFVVPNVCKACGALKW 188

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V KSG    V V ++L  MY  CG + DA KVF+E      + +++N +M
Sbjct: 189 SRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR--NAVAWNALM 246

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G    G+ EEA+  F DM    + P+ +T  + +SA         G Q HA A+ +G E
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G I+ A M+F R+ EKD+V+WN +IS Y Q+ L   AI     M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAF-------------------- 411
           +   ++ D  T  +L++++   E +++          H+F                    
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426

Query: 412 -----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS----PRNIITWN------ 456
                VF + +  ++ + N L++AYA++    +A ++F+ M     P N+ITWN      
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486

Query: 457 -----------------------------TLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                        T++NG + NG   + +    ++  S LRP+ 
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++++VALS+CA ++SL  G+ IHGY+++N    S +S+  +++ +YAKCGD++ + +VF 
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
             +  +    NA+ISAYA +G  KEA++ +++++ VG +KPD  T T VLSAC+HAG ++
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG-LKPDNITITNVLSACNHAGDIN 665

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
               IF  +V+     P  +H   M+DLL  AG  ++A R+I     +  +    +L ++
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVAS 725

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C       L   ++  LLE E +    YV +SN YA  G W+E   +RE++K  G+ K+P
Sbjct: 726 CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKP 785

Query: 727 GCSWI 731
           GCSWI
Sbjct: 786 GCSWI 790



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 274/565 (48%), Gaps = 22/565 (3%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
           Y   ++   +NG     + L  EM   ++R     +  +L  C     L  G+Q+H+ + 
Sbjct: 38  YFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARIL 97

Query: 216 KSG--FSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGR 271
           K+G  ++    +   L+  Y  C    DA ++ E   +K  V +  S+  ++     +G 
Sbjct: 98  KNGDFYARNEYIETKLVIFYAKC----DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNA 328
            E AL+ F +ML   + P      +V  AC      R G  VH   +KSG E    V+++
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
              MY  CG +D+A  +F  + +++ V+WN ++  Y Q      AI  + +M+  G+ P 
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273

Query: 389 EFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  + L++S   G +E  +  HA   +NG+  +  +  +L++ Y K   I+ A  +F 
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  ++++TWN +I+G++  G     +     + + +L+ D  TL+  +S+ AR  +L+ 
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK++  Y ++++  S + L + ++ +YAKCG +  + +VF+  +EKD I WN L++AYA+
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G   EA+  F  MQ  G + P+  T+  ++ +    G VD+   +F  M    G IP  
Sbjct: 454 SGLSGEALRLFYGMQLEG-VPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNL 511

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---FSACAAHGNLRLGRIIAGL 682
              + M++ + + G  +EA   +          N +++    SACA   +L +GR I G 
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571

Query: 683 LLEREQDKP--SVYVLLSNIYAAAG 705
           ++   Q     S+   L ++YA  G
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKCG 596



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 52/342 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+++  Q+    KLK D  +L+T ++A A   N   G ++  Y +
Sbjct: 344 NLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
           R   ++   +A+T++ +Y     +V  K+VF      D+  W T L+A            
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462

Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
                                    + G VD A ++F +M       +L  +  M+ G  
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + +S    LS C     L  GR +H  + ++   S LV
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A KVF  +K Y    +S N M+   A  G ++EA+  +R + 
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVF-GSKLYSELPLS-NAMISAYALYGNLKEAIALYRSLE 640

Query: 284 VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
              L+P  +T  +V+SAC         HA  +    E +T +
Sbjct: 641 GVGLKPDNITITNVLSAC--------NHAGDINQAIEIFTDI 674


>gi|334186756|ref|NP_193809.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635629|sp|Q9SVH0.2|PP329_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g20770
 gi|332658959|gb|AEE84359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 774

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 209/725 (28%), Positives = 358/725 (49%), Gaps = 89/725 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L R G  + AL ++ ++     L P  ++L++ L+AC+ + +  FG + H  A+
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAV 165

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH-VDYAC 143
           + GL     V N +LS+Y                                K G  VDY  
Sbjct: 166 KTGLDKNIFVGNALLSMY-------------------------------AKCGFIVDYGV 194

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV----- 198
            VF+ +   +   Y A+I G          + +FR M +  V+ D+   +++LS+     
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254

Query: 199 -CDAGLL----EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            CD+       E G+Q+H L  + GF   + + N+L+ +Y    ++  A  +F E     
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV- 313

Query: 254 CDHISYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
            + +S+N+M+ G     R +   E L R RD   +  +P+E+T +SV+ AC         
Sbjct: 314 -NVVSWNIMIVGFGQEYRSDKSVEFLTRMRD---SGFQPNEVTCISVLGACF-------- 361

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
                                     G ++    IF+ + +  + +WN M+S Y+     
Sbjct: 362 ------------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHY 397

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNAL 427
             AI  + +MQ   ++PD+ T   +L+S     F+E  + IH  V    I  N  + + L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457

Query: 428 ISAYAKNERIKQAYQIFHN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRP 485
           I+ Y++ E+++ +  IF + ++  +I  WN++I+GF  N    + L  F  +  +  L P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +E + +  LSSC+R+ SL HG+Q HG V+K+  +S   +  A+  +Y KCG++D + + F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
           + ++ K+T+ WN +I  Y  +G G EAV  ++ M   G  KPD  TF +VL+ACSH+GLV
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLV 636

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
           + G  I  SM   +G  P  DH  C++D LGRAG L++AE++  +   ++ S  W  L S
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           +C  HG++ L R +A  L+  +    + YVLLSN Y++   W+++A ++ L+ +  V K 
Sbjct: 697 SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT 756

Query: 726 PGCSW 730
           PG SW
Sbjct: 757 PGQSW 761



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 166/607 (27%), Positives = 296/607 (48%), Gaps = 52/607 (8%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
           L++ L    + R    G  +H + +R G+K+  ++ N +L LY    D    ++VF E+ 
Sbjct: 9   LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
             DVYSW  FL+   K+G +  ACEVFD MP+RD+  +N MI+     G+E+  + +++ 
Sbjct: 69  VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M         ++ ASVLS C   L   FG + H +  K+G    + V NAL++MY  CG 
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188

Query: 239 VVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           +VD   +VFE       + +SY  ++ GLA   +V EA+  FR M    ++   +   ++
Sbjct: 189 IVDYGVRVFESLSQP--NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI 246

Query: 298 MSACLCPR-------------VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           +S    PR             +G Q+H  A++ GF     ++N+ + +Y+    ++ A +
Sbjct: 247 LSIS-APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           IFA + E ++VSWN MI  + Q      ++     M+  G +P+E T  S+L        
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG------- 358

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
                                    A  ++  ++   +IF ++   ++  WN +++G+  
Sbjct: 359 -------------------------ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
                + + +F ++    L+PD+ TLSV LSSCAR+  L  GKQIHG V++  +     +
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 453

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMI-EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
            + +I +Y++C  ++ S  +F+  I E D   WN++IS +  +    +A+  F+ M    
Sbjct: 454 VSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 513

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            + P++ +F  VLS+CS    +  G R F  +V   G++      + + D+  + G +D 
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572

Query: 644 AERVINS 650
           A +  ++
Sbjct: 573 ARQFFDA 579



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 22/382 (5%)

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA +T     G + EAC +F  + E+D+VSWN MIS   ++     A++ Y  M   G  
Sbjct: 76  NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135

Query: 387 PDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERI-KQAYQ 442
           P  FT  S+L A S  ++ V     H      G+  NI V NAL+S YAK   I     +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS------S 496
           +F ++S  N +++  +I G       ++ +Q F  +    ++ D   LS  LS       
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255

Query: 497 CARISSL---RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           C  +S +     GKQIH   L+      + L N+++ +YAK  D++ +  +F  M E + 
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SWN +I  + Q     ++V     M+D G  +P++ T  +VL AC  +G V+ G RIF 
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETGRRIFS 374

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAH 670
           S+       P+    + ML       + +EA    R +  Q+++        + S+CA  
Sbjct: 375 SIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429

Query: 671 GNLRLGRIIAGLLLEREQDKPS 692
             L  G+ I G+++  E  K S
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNS 451


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  314 bits (805), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 210/698 (30%), Positives = 343/698 (49%), Gaps = 55/698 (7%)

Query: 86  AGLKAYPHVANT-------ILSLYKNARDLVSVKRVFSEIQN--PDVYSWTTFLSACTKM 136
           A L  +P V+N        +L L     D+  +K V + I     D++     + A  K+
Sbjct: 77  ALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKLAEDIHLANALIVAYLKL 136

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G V  A +VF  +   ++  Y AMI+G  ++  E   + +F  M    +  + +SF ++L
Sbjct: 137 GMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAIL 196

Query: 197 SVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           +VC   L LE G QLH++V K GF     V NAL+ +Y  CG +    ++F+E      D
Sbjct: 197 TVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHR--D 254

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC--LCPRVGYQVHA 312
             S+N ++  +      E A   FRDM  +   R    T  +++ A   L   VG ++HA
Sbjct: 255 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMVGREIHA 314

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL--- 369
             +K GFE+  SV NA I  Y+ CG I     +F +++ +D+++W  MI+ Y +  L   
Sbjct: 315 HVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDL 374

Query: 370 ----------------------------GRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
                                       G  A+  +  M   G+   +FT   +L + G 
Sbjct: 375 ALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGL 434

Query: 402 I---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI--FHNMSPRNIITWN 456
           +   ++ + IH F+   G  +N  +  AL+    +  R+  A ++    + S    I W 
Sbjct: 435 LMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWT 494

Query: 457 TLINGFLLNGFPVQGLQHFSE-LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           ++I G+  N  P + +  F +  L   +  D+   +  L  C  ++    GKQIH + LK
Sbjct: 495 SMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALK 554

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
           +  +S + +GN++IT+Y+KC ++D +++VFN+M   D +SWN LI+ +  H +G EA+S 
Sbjct: 555 SGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSV 614

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSH--AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           +  M+  G IKPD  TF  ++SA  H  + LVD+  R+F SM   Y   P  +H + ++ 
Sbjct: 615 WSKMEKAG-IKPDTVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVG 673

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
           +LG  G L+EAE +IN   I+  +  W AL  AC  H N  +G+  A  LL  +   PS 
Sbjct: 674 VLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPST 733

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y+L+SN+Y+A G W  +  +RE ++  G  K PG SWI
Sbjct: 734 YILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRSWI 771



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 189/375 (50%), Gaps = 10/375 (2%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++++ +   Y+ A  LF  +      + D ++LST L A   L +   G ++HA+ +
Sbjct: 259 NTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVI 317

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G ++   V N ++  Y     +  V  +F +++  DV +WT  ++A  + G  D A E
Sbjct: 318 KIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALE 377

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VFDKMP R+   YNA+++G  +NG     +  F  M +  V   +++   VL+ C  GLL
Sbjct: 378 VFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNAC--GLL 435

Query: 205 ---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
              +  +Q+H  + K GF     +  AL+ M   CG + DA K+F +        I +  
Sbjct: 436 MEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTS 495

Query: 262 MMDGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
           M+ G A   + EEA+  F +  L  ++   ++   +V+  C       +G Q+H  A+KS
Sbjct: 496 MICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKS 555

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF +   V N+ ITMYS C  +D+A  +F  +   DIVSWN +I+ +     G  A+  +
Sbjct: 556 GFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVW 615

Query: 378 LEMQSVGIRPDEFTF 392
            +M+  GI+PD  TF
Sbjct: 616 SKMEKAGIKPDTVTF 630



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 145/611 (23%), Positives = 262/611 (42%), Gaps = 103/611 (16%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  ++S   + A+ +F ++ SS  ++ + +S    L  C  L +   G QLHA  ++ G
Sbjct: 161 ISGFAKSNRERQAMEIFFRMRSS-GIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMG 219

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
              Y  V+N ++ LY     L SV ++F E+ + D+ SW T +S+  K            
Sbjct: 220 FLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRDIASWNTVISSVVK------------ 267

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF 206
                             E  YE     LFR+M ++D  R D+++ +++L          
Sbjct: 268 ------------------EMMYER-AFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV 308

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA----------------- 249
           GR++H+ V K GF   +SV+NALI  Y  CG++     +FE+                  
Sbjct: 309 GREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYME 368

Query: 250 ------------KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
                       K    + ISYN ++ G    G   +AL  F  M+   +  ++ T   V
Sbjct: 369 FGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGV 428

Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA--CMIFARLQEK 352
           ++AC   +  ++  Q+H   +K GF +   +  A + M + CG++ +A          + 
Sbjct: 429 LNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQS 488

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG---FIEMVEMI 408
             + W +MI  YA+      AI  + + Q  G +  D+    ++L   G   F EM + I
Sbjct: 489 GSIIWTSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQI 548

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H     +G ++++ V N++I+ Y+K   +  A ++F+ M   +I++WN LI G LL+   
Sbjct: 549 HCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQG 608

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + L  +S++  + ++PD  T  +       IS+ RH          +NL+         
Sbjct: 609 DEALSVWSKMEKAGIKPDTVTFVLI------ISAYRH--------TNSNLVD-------- 646

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
                 C  L  S++     I+     + +L+      G  +EA      M     I+P+
Sbjct: 647 -----NCRRLFLSMKTI-YHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMP----IEPE 696

Query: 589 QATFTAVLSAC 599
            + + A+L AC
Sbjct: 697 ASVWRALLDAC 707


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 307/594 (51%), Gaps = 19/594 (3%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           R L  +N MI   T NG+    + ++  M    V  +N ++  +L  C +   ++ G  L
Sbjct: 9   RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  V K GF     V  AL+ MY  C +V  A +VF+E        +S+N M+   +   
Sbjct: 69  HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSV--VSWNAMVSAYSRRS 126

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMS------ACLCPRVGYQVHAQAMKSGFEAYTS 324
            +++AL   ++M V    P+  TFVS++S      +     +G  +H   +K G   Y  
Sbjct: 127 SMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGI-VYLE 185

Query: 325 VS--NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           VS  N+ + MY     +DEA  +F  + EK I+SW TMI  Y +      A   + +MQ 
Sbjct: 186 VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH 245

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERI 437
             +  D   F +L+  SG I++ ++     +H+ V   G      V N LI+ YAK   +
Sbjct: 246 QSVGIDFVVFLNLI--SGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNL 303

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A +IF  +  +++++W ++I G++  G P + L  F  ++ +++RP+  TL+  +S+C
Sbjct: 304 TSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSAC 363

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A + SL  G++I  Y+  N L S   +  ++I +Y+KCG +  +  VF  + +KD   W 
Sbjct: 364 ADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWT 423

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I++YA HG G EA+S F  M     I PD   +T+V  ACSH+GLV++G + F SM  
Sbjct: 424 SMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQK 483

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           D+G  P  +H +C++DLLGR G LD A   I       ++  W  L SAC  HGN+ LG 
Sbjct: 484 DFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGE 543

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +    LL+        YVL++N+Y + G W+EA  +R  +   G++K+ G S +
Sbjct: 544 LATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 140/564 (24%), Positives = 249/564 (44%), Gaps = 54/564 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L   N+ + + + +G +   L+++  + HS        Y L   L ACANL +   G  L
Sbjct: 11  LYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPL--LLKACANLPSIQHGTML 68

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H + L+ G +A   V   ++ +Y     + S ++VF E+    V SW             
Sbjct: 69  HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSW------------- 115

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-V 198
                             NAM++  +     D  + L +EM  L       +F S+LS  
Sbjct: 116 ------------------NAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGY 157

Query: 199 CDAGLLEF---GRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFE--EAKGY 252
            +    EF   G+ +H  + K G   L VS+ N+L+ MY     + +A KVF+  + K  
Sbjct: 158 SNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSI 217

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQ 309
               IS+  M+ G   +G   EA   F  M   S+    + F++++S C+  R   +   
Sbjct: 218 ----ISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASS 273

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH+  +K G      V N  ITMY+ CG +  A  IF  + EK ++SW +MI+ Y     
Sbjct: 274 VHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGH 333

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
              A+  +  M    IRP+  T  +++   A  G + + + I  ++F+NG+ ++ QV  +
Sbjct: 334 PGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTS 393

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRP 485
           LI  Y+K   I +A ++F  ++ +++  W ++IN + ++G   + +  F ++  +E + P
Sbjct: 394 LIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMP 453

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRV 544
           D    +    +C+    +  G +    + K+  +   +     +I L  + G LD +L  
Sbjct: 454 DAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNA 513

Query: 545 FN-MMIEKDTISWNALISAYAQHG 567
              M  +     W  L+SA   HG
Sbjct: 514 IQGMPPDVQAQVWGPLLSACRIHG 537


>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g58590-like [Vitis vinifera]
          Length = 921

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 207/680 (30%), Positives = 336/680 (49%), Gaps = 76/680 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+G  ++A +LF ++   +  +P  ++ +  L+ CA+L+ +  G QL A  +
Sbjct: 123 NTIIGGYSRNGSVEEAWNLFSEMRR-YGFEPTQHTFAGLLS-CASLKLSQ-GFQLQAQMV 179

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL                               + D Y+ T  LS   + G +D    
Sbjct: 180 KSGLF------------------------------HADPYAGTALLSLFGRNGCIDEVVC 209

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGL 203
            F++MP ++L  +N +I+     G+ +  + LFRE+ +        SF  VLS       
Sbjct: 210 AFEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQD 269

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G Q+H L+ K+GF C VSV+N+LI MY  C  +  A K+FE   G V D +S+N M+
Sbjct: 270 LELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFE--LGCVRDVVSWNTMI 327

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
             LA   R  + L  F  M +  + P+E TFVSV+++C   ++   G  +HA+ +++  E
Sbjct: 328 GALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIE 387

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +   V +A +  Y+ C  ++ A   F  + EK++V WN +I  Y+ +     ++L    M
Sbjct: 388 SNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCWNALILGYSNKCFSSVSLLK--RM 445

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
             +G  P+EF+F + L SS   E+ + +H  +   G   N  VS+ALI++YAKN  I  A
Sbjct: 446 LQLGYCPNEFSFSAALKSSLVFEL-QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDA 504

Query: 441 Y--------------------------------QIFHNMSPRNIITWNTLINGFLLNGFP 468
                                             +F  +   +I++WN LI     NG  
Sbjct: 505 LIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDY 564

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNA 527
            +  + F  + M+++ PD YT+   LS C ++ +L  G  IHG+++K +       + N 
Sbjct: 565 KEVFELFKHMQMAQIYPDNYTVVSLLSVCTKLCNLALGSSIHGFIIKTDFKFCDTFVFNV 624

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y KCG ++ SL++FN +IE++ I+W ALISA   +G   EA+  F+ M+ +G  KP
Sbjct: 625 LIDMYGKCGCIESSLKIFNKIIERNIITWTALISALGVNGYANEALKLFREMESLG-FKP 683

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D     AV SAC H GLV +G  +F  M    G  P  DH  C++DLL R G+L EAE+V
Sbjct: 684 DGVALVAVFSACRHGGLVKEGMELFWQMKKSCGIEPNIDHYHCVVDLLARCGHLQEAEQV 743

Query: 648 INSQHIQARSDNWWALFSAC 667
           I++      +  W +    C
Sbjct: 744 ISNMPFPPNALIWRSFLEGC 763



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 171/611 (27%), Positives = 289/611 (47%), Gaps = 56/611 (9%)

Query: 103 KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT 162
           K  + L ++    +      ++ +   +S     G +  A +VF +M  R++  YN +I 
Sbjct: 68  KETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNVVSYNTIIG 127

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSG-FSC 221
           G + NG  +    LF EM +       ++FA +LS C +  L  G QL + + KSG F  
Sbjct: 128 GYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLS-CASLKLSQGFQLQAQMVKSGLFHA 186

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
                 AL++++   G + +    FEE      + +++N ++    + G  EE++  FR+
Sbjct: 187 DPYAGTALLSLFGRNGCIDEVVCAFEEMPQK--NLVTWNTVISLFGNYGFSEESMFLFRE 244

Query: 282 MLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           ++      SE +F+ V+S     +   +G QVH   +K+GF+   SV N+ I MY  C  
Sbjct: 245 LMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSC 304

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           I  A  +F     +D+VSWNTMI   A+       +  +L+M   G+ P+E TF S++ S
Sbjct: 305 ICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSVINS 364

Query: 399 SGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
              ++++   E IHA V  N I +N+ V +AL+  YAK + ++ A+  F  +  +N++ W
Sbjct: 365 CTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNVVCW 424

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS-------SLRHGKQ 508
           N LI G+    F    L     +L     P+E++ S AL S             +R G Q
Sbjct: 425 NALILGYSNKCFSSVSL--LKRMLQLGYCPNEFSFSAALKSSLVFELQQLHCLIMRMGYQ 482

Query: 509 IHGYV--------LKNNLISK-------------MSLGNAMITLYAKCGDLDCSLRVFNM 547
            + YV         KN +IS              +   NA+  +Y K G    +  +F++
Sbjct: 483 QNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNKIGQYHRTQDLFSL 542

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + E D +SWN LI+A A++G+ KE    FK MQ + +I PD  T  ++LS C+    +  
Sbjct: 543 LEEPDIVSWNILIAACARNGDYKEVFELFKHMQ-MAQIYPDNYTVVSLLSVCTKLCNLAL 601

Query: 608 GTRIFDSMVNDYGFIPAEDHLSC-------MLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           G+ I       +GFI   D   C       ++D+ G+ G ++ + ++ N + I+     W
Sbjct: 602 GSSI-------HGFIIKTDFKFCDTFVFNVLIDMYGKCGCIESSLKIFN-KIIERNIITW 653

Query: 661 WALFSACAAHG 671
            AL SA   +G
Sbjct: 654 TALISALGVNG 664



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 210/405 (51%), Gaps = 12/405 (2%)

Query: 201 AGLLEFGRQLHSLVTK--SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           A  L+  + LH+L     S  +  + + N LI++Y   G +  A KVF E      + +S
Sbjct: 64  APTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQR--NVVS 121

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS-ACLCPRVGYQVHAQAMKS 317
           YN ++ G +  G VEEA   F +M      P++ TF  ++S A L    G+Q+ AQ +KS
Sbjct: 122 YNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLLSCASLKLSQGFQLQAQMVKS 181

Query: 318 G-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           G F A      A ++++   G IDE    F  + +K++V+WNT+IS +        ++  
Sbjct: 182 GLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVISLFGNYGFSEESMFL 241

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + E+   G    E +F  +L   AS   +E+ E +H  +  NG    + V N+LI+ Y K
Sbjct: 242 FRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDCEVSVLNSLINMYVK 301

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              I  A ++F     R++++WNT+I     +  P + L+ F ++ +  + P+E T    
Sbjct: 302 CSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGVLPNETTFVSV 361

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           ++SC  +  L  G+ IH  V++N + S + +G+A++  YAKC +L+ +   F+ + EK+ 
Sbjct: 362 INSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLESAHCCFDEIDEKNV 421

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + WNALI  Y+   +   +VS  K M  +G   P++ +F+A L +
Sbjct: 422 VCWNALILGYSN--KCFSSVSLLKRMLQLGYC-PNEFSFSAALKS 463


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 195/635 (30%), Positives = 321/635 (50%), Gaps = 39/635 (6%)

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L   + +F ++ + +++S    LSA +  G +  A  +F   P R+   +  M+      
Sbjct: 273 LHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAA 332

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVN 227
           G     + LFR M    V  D  +  +VL++    +      LH    K G    V V N
Sbjct: 333 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV----PSLHPFAIKFGLDTHVFVCN 388

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
            L+  Y   G +  A +VF E      D ++YN MM G +  G   +AL      L A++
Sbjct: 389 TLLDAYCKHGLLAAARRVFLEMHDK--DAVTYNAMMMGCSKEGLHTQAL-----QLFAAM 441

Query: 288 RPSELTFVSVMSACLCPRVGYQVHAQAM--------KSGFEAYTSVSNAAITMYSSCGKI 339
           R                R GY  H   +        +S       V+N+ +  YS C  +
Sbjct: 442 R----------------RAGYSRHPLHLLQYSHSRSRSTSVLNVFVNNSLLDFYSKCDCL 485

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           D+   +F  + E+D VS+N +I+ YA      + +  + EMQ +G       + ++L+ +
Sbjct: 486 DDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVA 545

Query: 400 GFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G +  V +   IHA + + G+ +   + NALI  Y+K   +  A   F N S ++ I+W 
Sbjct: 546 GSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWT 605

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            LI G++ NG   + LQ FS++  + LRPD  T S  + + + ++ +  G+Q+H Y++++
Sbjct: 606 ALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS 665

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
              S +  G+ ++ +YAKCG LD +LR F+ M E+++ISWNA+ISAYA +GE K A+  F
Sbjct: 666 GYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMF 725

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M   G   PD  TF +VL+ACSH GL D+  + F  M + Y   P ++H +C++D LG
Sbjct: 726 EGMLHCG-FNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLG 784

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R G   + ++++     +A    W ++  +C  HGN  L R+ A  L   E    + YV+
Sbjct: 785 RVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVI 844

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LSNIYA AG WE+AA ++++++  GV K+ G SW+
Sbjct: 845 LSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWV 879



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 166/619 (26%), Positives = 277/619 (44%), Gaps = 69/619 (11%)

Query: 20  LLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L  +LN+ L +L  SGH   A  +F Q+   HK   +I+SL+  L+A ++  +      L
Sbjct: 256 LTYRLNLGLRSLLSSGHLHRARAMFDQM--PHK---NIFSLNLILSAYSSSGDLPAAQHL 310

Query: 80  -----HAYALRAGLKAYPHVA----NTILSLYKNA------RDLVSVKRVFS-------- 116
                H  A    +    H A    +  LSL++         D V+V  V +        
Sbjct: 311 FLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS 370

Query: 117 ----EIQ---NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
                I+   +  V+   T L A  K G +  A  VF +M D+D   YNAM+ GC++ G 
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
               + LF  M     RR  YS   +       LL++    HS  ++S     V V N+L
Sbjct: 431 HTQALQLFAAM-----RRAGYSRHPL------HLLQYS---HSR-SRSTSVLNVFVNNSL 475

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           +  Y  C  + D  ++F+E      D++SYNV++   A        L  FR+M       
Sbjct: 476 LDFYSKCDCLDDMRRLFDEMPER--DNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDR 533

Query: 290 SELTFVSVMS-ACLCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
             L + +++S A   P V  G Q+HAQ +  G  +   + NA I MYS CG +D A   F
Sbjct: 534 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 593

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +   EK  +SW  +I+ Y Q      A+  + +M+  G+RPD  TF S++ +S  + M+ 
Sbjct: 594 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 653

Query: 407 M---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
           +   +H+++  +G  +++   + L+  YAK   + +A + F  M  RN I+WN +I+ + 
Sbjct: 654 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 713

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKM 522
             G     ++ F  +L     PD  T    L++C+  + L      + +++K+   IS  
Sbjct: 714 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH-NGLADECMKYFHLMKHQYSISPW 772

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIE----KDTISWNALISAYAQHGEGKEAVSCFKA 578
               A +      G + C  +V  M++E     D I W +++ +   HG  + A     A
Sbjct: 773 KEHYACVI--DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARV---A 827

Query: 579 MQDVGRIKPDQATFTAVLS 597
              +  ++P  AT   +LS
Sbjct: 828 ADKLFGMEPTDATPYVILS 846



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 23/232 (9%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SN S++  +     +    ++G +++AL LF  +  +  L+PD  + S+ + A ++L   
Sbjct: 594 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRA-GLRPDRATFSSIIKASSSLAMI 652

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G QLH+Y +R+G K+     + ++ +Y     L    R F E+   +  SW   +SA 
Sbjct: 653 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 712

Query: 134 TKMGHVDYACEVFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRD 188
              G    A ++F+ M     + D   + +++  C+ NG  D  +  F  M H+  +   
Sbjct: 713 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 772

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              +A V+          GR            C   V   L+ M F    ++
Sbjct: 773 KEHYACVIDT-------LGR----------VGCFSQVQKMLVEMPFKADPII 807


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/595 (31%), Positives = 312/595 (52%), Gaps = 13/595 (2%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +D A E    +   D  ++N MI G  + G     +  +R M +   R D ++F  V+
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C   G L+ GR  H +V K G    V   N+L+  Y   G V DA +VF+     V D
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRD 172

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV----GYQV 310
            +++N M+DG  S G    AL  F++M  A  ++   +  ++ ++AC C  V    G ++
Sbjct: 173 IVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAAC-CLEVSSMQGKEI 231

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H   ++ G E    V  + + MY  CG++  A  +FA +  + +V+WN MI  YA     
Sbjct: 232 HGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERP 291

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
             A   +++M++ G++ +  T  +LLA+    E       +H +V     + ++ +  AL
Sbjct: 292 DEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETAL 351

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K  +++ + +IF  ++ + +++WN +I  ++      + +  F ELL   L PD 
Sbjct: 352 LEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDY 411

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           +T+S  + +   + SLRH +QIH Y++         + NA++ +YA+ GD+  S  +F+ 
Sbjct: 412 FTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDK 471

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M+ KD ISWN +I  YA HG+GK A+  F  M+  G ++P+++TF +VL+ACS +GLVD+
Sbjct: 472 MVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNG-LQPNESTFVSVLTACSVSGLVDE 530

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+ M+ +YG IP  +H  CM DLLGR G L E  + I S  I   S  W +L +A 
Sbjct: 531 GWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTAS 590

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
               ++ +    A  + + E D    Y++LS++YA AG WE+   +R L+K  G+
Sbjct: 591 RNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 248/523 (47%), Gaps = 51/523 (9%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++    +  CA L     G   H   ++ GL+                        
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEH----------------------- 140

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                   DVY+  + ++   K+G V+ A  VFD MP RD+  +N M+ G   NG   + 
Sbjct: 141 --------DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLA 192

Query: 174 IGLFREMHK-LDVRRDNYSFASVLSVCDAGLLEF----GRQLHSLVTKSGFSCLVSVVNA 228
           +  F+EMH  L+V+ D+    + L+ C    LE     G+++H  V + G    + V  +
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAAC---CLEVSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY  CG V  A  VF  A   +   +++N M+ G A   R +EA   F  M    L+
Sbjct: 250 LLDMYCKCGEVAYARSVF--ATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
              +T +++++AC        G  VH   ++  F  +  +  A + MY   GK++ +  I
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFI 402
           F ++  K +VSWN MI+ Y  + +   AI  +LE+ +  + PD FT  +++ +    G +
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                IH+++   G   N  + NA++  YA++  +  + +IF  M  +++I+WNT+I G+
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL--KNNLIS 520
            ++G     L+ F E+  + L+P+E T    L++C+ +S L     +H  ++  +  +I 
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS-VSGLVDEGWMHFNLMLQEYGMIP 546

Query: 521 KMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
           ++     M  L  + GDL   L+ + +M I+  +  W +L++A
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 169/326 (51%), Gaps = 6/326 (1%)

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S + +   ++ G++DEA    A ++  D    N MI  +A   L   A+ AY  M   G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPD FTF  ++   A  G ++     H  V   G+  ++   N+L++ YAK   ++ A +
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARIS 501
           +F  M  R+I+TWNT+++G++ NG     L  F E+  + E++ D   +  AL++C    
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           S   GK+IHGYV+++ L   + +G +++ +Y KCG++  +  VF  M  +  ++WN +I 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            YA +    EA  CF  M+  G ++ +  T   +L+AC+       G  +   +V    F
Sbjct: 284 GYALNERPDEAFDCFMQMRAEG-LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ-F 341

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERV 647
           +P     + +L++ G+ G ++ +E++
Sbjct: 342 LPHVVLETALLEMYGKVGKVESSEKI 367



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 193/433 (44%), Gaps = 48/433 (11%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  F ++H + +++ D   +   LAAC    ++  G ++H Y +R GL+    V  ++L
Sbjct: 192 ALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLL 251

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y                                K G V YA  VF  MP R +  +N 
Sbjct: 252 DMY-------------------------------CKCGEVAYARSVFATMPLRTVVTWNC 280

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTK 216
           MI G   N   D     F +M    ++ +  +  ++L+ C   ++ L  +GR +H  V +
Sbjct: 281 MIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSL--YGRSVHGYVVR 338

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
             F   V +  AL+ MY   G V  + K+F +        +S+N M+          EA+
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTL--VSWNNMIAAYMYKEMYTEAI 396

Query: 277 IRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F ++L   L P   T  +V+ A +     R   Q+H+  +  G+   T + NA + MY
Sbjct: 397 TLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMY 456

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           +  G +  +  IF ++  KD++SWNTMI  YA    G++A+  + EM+  G++P+E TF 
Sbjct: 457 ARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFV 516

Query: 394 SLLASSGFIEMVE--MIHAFVFIN--GIITNIQVSNALISAYAKNERIKQAYQIFHNMS- 448
           S+L +     +V+   +H  + +   G+I  I+    +     +   +++  Q   +M  
Sbjct: 517 SVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPI 576

Query: 449 -PRNIITWNTLIN 460
            P + + W +L+ 
Sbjct: 577 DPTSRV-WGSLLT 588



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 39/266 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA--N 96
           +A   F+Q+ +   L+ ++ +    LAACA   ++ +G  +H Y +R   +  PHV    
Sbjct: 293 EAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR--QFLPHVVLET 349

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            +L +Y     + S +++F +I N  + SW   ++A                       +
Sbjct: 350 ALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAY----------------------M 387

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVT 215
           Y  M T           I LF E+    +  D ++ ++V+ +    G L   RQ+HS + 
Sbjct: 388 YKEMYTE---------AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
             G++    ++NA++ MY   G+VV + ++F+  K    D IS+N M+ G A  G+ + A
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFD--KMVSKDVISWNTMIMGYAIHGQGKTA 496

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC 301
           L  F +M    L+P+E TFVSV++AC
Sbjct: 497 LEMFDEMKYNGLQPNESTFVSVLTAC 522



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y +A+ LF+++  +  L PD +++ST + A   L +     Q+H+Y +  G      + N
Sbjct: 392 YTEAITLFLEL-LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL-- 154
            +L +Y  + D+V+ + +F ++ + DV SW T +      G    A E+FD+M    L  
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 155 --PVYNAMITGCTENGYEDIG 173
               + +++T C+ +G  D G
Sbjct: 511 NESTFVSVLTACSVSGLVDEG 531


>gi|115486944|ref|NP_001065959.1| Os12g0109800 [Oryza sativa Japonica Group]
 gi|113648466|dbj|BAF28978.1| Os12g0109800 [Oryza sativa Japonica Group]
          Length = 841

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 215/714 (30%), Positives = 341/714 (47%), Gaps = 55/714 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL-----RNAAFGNQLHAYALRA 86
           +R+G        FV +  S    P+ +SL+T L AC ++             LH  A+RA
Sbjct: 64  TRNGAPHLGFRFFVSMIRS-GFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRA 122

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           GL + P V +++L +Y     + + +R F+ I+N                          
Sbjct: 123 GLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRN-------------------------- 156

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
                +DL  +NAM+ G   NG+    I     MH   +  D Y++ S +  C  +    
Sbjct: 157 -----KDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWG 211

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GRQLH LV  S      SV+N+L+ MYF       A  VF + +    D +S+N M  G
Sbjct: 212 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQK--DTVSWNTMFSG 269

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAY 322
            A     +       DM     +P+E+TF  ++    A     +G Q+ A A + G+   
Sbjct: 270 FAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDN 329

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+NA I M   CG +D A   F  L  ++IV+WN +I+ Y   +    A+  +  +  
Sbjct: 330 VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVC 389

Query: 383 VGIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKN-ER 436
           +G RPDEFT+ ++L  S F E       E IHA +   G  +   VS +LI A A     
Sbjct: 390 IGERPDEFTYSAVL--SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGS 447

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALS 495
           ++ + +I  +     +++W  +I+ FL +G   + +  F+     S  +PDE+ L+  L+
Sbjct: 448 VQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLN 507

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDT 553
           +CA  + +RH + IH  VLK    +   + +A++  YAKCG++  +   F  +     D 
Sbjct: 508 ACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDA 567

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           I +N +++AYA HG   EA++ ++ M    ++ P  ATF A+LSACSH GLV+ G   F 
Sbjct: 568 IMYNTMLTAYANHGLIHEALNLYEEMTK-AKLNPTPATFVAILSACSHLGLVEQGKLAFS 626

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +M++ YG  PA  + +C++DLL R G LDEA+ VI++   Q     W +L + C  HGN 
Sbjct: 627 TMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNK 686

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           +LG + A  +L         YV LSN+YA  G W+ A   R  + +  + K  G
Sbjct: 687 QLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNNLQKVHG 740



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 254/527 (48%), Gaps = 22/527 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G +D A +VFD+MP R+L  + AM++  T NG   +G   F  M +     + +S A+
Sbjct: 34  RRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLAT 93

Query: 195 VLSVCDAGL------LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +L+ C + +      L     LH +  ++G      V ++L+ MY   G +  A + F  
Sbjct: 94  MLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAH 153

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
            +    D   +N M++G  S G    A+     M  + L P   T++S + AC       
Sbjct: 154 IRNK--DLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWG 211

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+H   + S  E+ TSV N+ + MY    + + A  +F ++++KD VSWNTM S +A
Sbjct: 212 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFA 271

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
                ++     ++M   G +P+E TF  LL  SG  E   +   I A  + +G   N+ 
Sbjct: 272 HDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL 331

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+NA+I+   +   + +AY  F +++ RNI+TWN +I G+ L       ++ F  L+   
Sbjct: 332 VANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIG 391

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-GDLDCS 541
            RPDE+T S  LS+       R  +QIH  +LK    S   +  ++I   A   G +  S
Sbjct: 392 ERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSS 451

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           L++     + + +SW A+ISA+ +HG   E +  F   +     KPD+     VL+AC++
Sbjct: 452 LKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACAN 511

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAE 645
           A L+    R   S+V   G     +H    S ++D   + G +  AE
Sbjct: 512 AALIRH-CRCIHSLVLKTGH---SNHFCVASAVVDAYAKCGEITSAE 554



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 231/511 (45%), Gaps = 21/511 (4%)

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L   Y   G +  A KVF+E      + +S+  M+      G        F  M+ +
Sbjct: 25  MNYLPIYYARRGLLDSALKVFDEMPHR--NLVSWTAMVSASTRNGAPHLGFRFFVSMIRS 82

Query: 286 SLRPSELTFVSVMSACLCP--------RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
              P+E +  ++++AC            +   +H  A+++G ++   V ++ + MY+  G
Sbjct: 83  GFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHG 142

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
           +I  A   FA ++ KD+  WN M+  Y     G  AI   L M   G+ PD +T+ S + 
Sbjct: 143 RIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVK 202

Query: 398 S---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           +   S    +   +H  V  + + +N  V N+L+  Y +  + + A  +F  +  ++ ++
Sbjct: 203 ACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVS 262

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+ +GF  +        +  ++  +  +P+E T SV L       +   G QI     
Sbjct: 263 WNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAY 322

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           ++     + + NA+I +  +CG LD +   F  +  ++ ++WN +I+ Y      ++A+ 
Sbjct: 323 RHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMR 382

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F+++  +G  +PD+ T++AVLSA   A    D  +I  +++   GF   +   + ++  
Sbjct: 383 LFRSLVCIGE-RPDEFTYSAVLSAFQEAHGARDHEQI-HAIILKQGFASCQFVSTSLIKA 440

Query: 635 LGRA-GYLDEAERVI-NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
              A G +  + ++I +S  ++  S  W A+ SA   HG       +  L      +KP 
Sbjct: 441 NAAAFGSVQSSLKIIEDSGKMELVS--WGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPD 498

Query: 693 VYVLLS--NIYAAAGLWEEAANIRELLKRTG 721
            ++L +  N  A A L      I  L+ +TG
Sbjct: 499 EFILATVLNACANAALIRHCRCIHSLVLKTG 529



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 141/601 (23%), Positives = 253/601 (42%), Gaps = 60/601 (9%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI A     ++   + L   N  L     +G    A+   + +H S  L PD Y+  + +
Sbjct: 143 RIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHS-GLAPDRYTYISAV 201

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            AC+       G QLH   + + L++   V N+++ +Y  AR   +   VF +I+  D  
Sbjct: 202 KACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTV 261

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SW                               N M +G   +  +    G   +M +  
Sbjct: 262 SW-------------------------------NTMFSGFAHDEDDKAVFGYLIDMSRTG 290

Query: 185 VRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            + +  +F+ +L +  A      G Q+ +L  + G++  V V NA+I M F CG      
Sbjct: 291 FKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCG------ 344

Query: 244 KVFEEAKGYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
            + + A G+ C     + +++N ++ G       E+A+  FR ++    RP E T+ +V+
Sbjct: 345 -LLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVL 403

Query: 299 SA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDI 354
           SA       R   Q+HA  +K GF +   VS + I   ++  G +  +  I     + ++
Sbjct: 404 SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMEL 463

Query: 355 VSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
           VSW  +IS + +  L    I  + L       +PDEF   ++L   A++  I     IH+
Sbjct: 464 VSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHS 523

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLINGFLLNGFP 468
            V   G   +  V++A++ AYAK   I  A   F  +S    + I +NT++  +  +G  
Sbjct: 524 LVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLI 583

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA- 527
            + L  + E+  ++L P   T    LS+C+ +  +  GK     +L    +       A 
Sbjct: 584 HEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYAC 643

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ L A+ G LD +  V + M  +     W +L++    HG  +  V    A + + R+ 
Sbjct: 644 LVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGV---LAAEQILRMA 700

Query: 587 P 587
           P
Sbjct: 701 P 701



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 14/339 (4%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G  A+T   N     Y+  G +D A  +F  +  +++VSW  M+S   +         
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 376 AYLEMQSVGIRPDEFTFGSLLA--------SSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            ++ M   G  P+EF+  ++L         SS  + +   +H      G+ +N  V ++L
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 134

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK+ RI  A + F ++  +++  WN ++ G++ NGF    +     +  S L PD 
Sbjct: 135 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 194

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           YT   A+ +C+  +    G+Q+H  V+ + L S  S+ N+++ +Y +    + +  VF  
Sbjct: 195 YTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 254

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACSHAGLV 605
           + +KDT+SWN + S +A H E  +AV  F  + D+ R   KP++ TF+ +L         
Sbjct: 255 IRQKDTVSWNTMFSGFA-HDEDDKAV--FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 311

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             G +IF ++   +G+       + ++++L R G LD A
Sbjct: 312 SLGLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRA 349


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 201/583 (34%), Positives = 312/583 (53%), Gaps = 45/583 (7%)

Query: 190 YSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           ++F   L  C A   L  G+ LH+L  KS       + N  + +Y  C  +  A +VF+ 
Sbjct: 9   HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 249 A-----------------KGYV------------CDHISYNVMMDGLASVGRVEEALIRF 279
                             + YV             D +SYN ++   A  G  + A   F
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 280 RDMLVASLRPSELTFVSVMSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            +M  A L     T   +++AC    VG   Q+HA ++ +G ++Y SV NA IT YS  G
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGI-NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 338 KIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
            + EA  IF  L E +D VSWN+M+  Y Q   G  A+  YLEM   G+  D FT  S+L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 397 ASSGFIEMVEMI-----HAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPR 450
             + F  + +++     HA +  +G   N  V + LI  Y+K    +    ++F  +S  
Sbjct: 248 --TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 451 NIITWNTLINGF-LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++ WNT+I+G+ L      + L+ F +L +   RPD+ +L   +S+C+ +SS   G+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 510 HGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           HG  LK ++ S ++S+ NA+I +Y+KCG+L  +  +F+ M E +T+S+N++I+ YAQHG 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G +++  F+ M ++G   P   TF +VL+AC+H G V+DG   F+ M   +G  P   H 
Sbjct: 426 GFQSLHLFQRMLEMG-FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           SCM+DLLGRAG L EAER+I +         W AL  AC  HGN+ L    A  LL+ + 
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              + YV+L+NIY+  G  ++AA++R+L++  GV K+PGCSWI
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWI 587



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 161/581 (27%), Positives = 273/581 (46%), Gaps = 33/581 (5%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H     +++    L  C   R+   G  LHA  +++ +    +++N  L LY   R L +
Sbjct: 2   HHFSSLLHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSA 61

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
            +RVF    + +V+S+ T +SA  K  +V+ A ++FD+MP  D   YN +I      G  
Sbjct: 62  ARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDT 121

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
                LF EM +  +  D ++ + +++ C  + GL+   RQLH+L   +G    VSV NA
Sbjct: 122 QPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNA 178

Query: 229 LITMYFNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           LIT Y   G + +A ++F    E +    D +S+N M+          +AL  + +M V 
Sbjct: 179 LITSYSKNGFLKEARRIFHWLSEDR----DEVSWNSMVVAYMQHREGSKALELYLEMTVR 234

Query: 286 SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            L     T  SV++A    +    G Q HA+ +KSG+   + V +  I +YS CG     
Sbjct: 235 GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD 294

Query: 343 C-MIFARLQEKDIVSWNTMISTYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
           C  +F  +   D+V WNTMIS Y+   +L   A+  + ++Q VG RPD+ +   ++++  
Sbjct: 295 CRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACS 354

Query: 401 FI---EMVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            +        +H       I +N I V+NALI+ Y+K   ++ A  +F  M   N +++N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++I G+  +G   Q L  F  +L     P   T    L++CA    +  GK I+  ++K 
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQ 473

Query: 517 NLISKMSLGN--AMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAV 573
               +   G+   MI L  + G L  + R+   +  +     W+AL+ A   HG  + A+
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAI 533

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
              KA   + ++ P  A    +L     A +  D  R+ D+
Sbjct: 534 ---KAANRLLQLDPLNAAPYVML-----ANIYSDNGRLQDA 566


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 184/594 (30%), Positives = 311/594 (52%), Gaps = 11/594 (1%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +D A E    +   D  ++N MI G  + G     +  +R M +   R D ++F  V+
Sbjct: 55  GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C   G L+ GR  H +V K G    V   N+L+  Y   G V DA +VF+     V D
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP--VRD 172

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSAC---LCPRVGYQVH 311
            +++N+M+DG  S G    AL  F++M  A  ++   +  ++ ++AC        G ++H
Sbjct: 173 IVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIH 232

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              ++ G E    V  + + MY  CG++  A  +FA +  + +V+WN MI  YA      
Sbjct: 233 GYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPD 292

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
            A   +++M++ G++ +  T  +LLA+    E       +H +V     + ++ +  AL+
Sbjct: 293 EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALL 352

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K  +++ + +IF  ++ + +++WN +I  ++      + +  F ELL   L PD +
Sbjct: 353 EMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYF 412

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T+S  + +   + SLRH +QIH Y++         + NA++ +YA+ GD+  S  +F+ M
Sbjct: 413 TMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKM 472

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
           + KD ISWN +I  YA HG+GK A+  F  M+  G ++P+++TF +VL+ACS +GLVD+G
Sbjct: 473 VSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNG-LQPNESTFVSVLTACSVSGLVDEG 531

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
              F+ M+ +YG IP  +H  CM DLLGR G L E  + I S  I   S  W +L +A  
Sbjct: 532 WMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASR 591

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
              ++ +    A  + + E D    Y++LS++YA AG WE+   +R L+K  G+
Sbjct: 592 NQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 249/523 (47%), Gaps = 51/523 (9%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++    +  CA L     G   H   ++ GL+                        
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEH----------------------- 140

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
                   DVY+  + ++   K+G V+ A  VFD MP RD+  +N M+ G   NG   + 
Sbjct: 141 --------DVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLA 192

Query: 174 IGLFREMHK-LDVRRDNYSFASVLSVCDAGLLEF----GRQLHSLVTKSGFSCLVSVVNA 228
           +  F+EMH  L+V+ D+    + L+ C    LEF    G+++H  V + G    + V  +
Sbjct: 193 LACFQEMHDALEVQHDSVGIIAALAAC---CLEFSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY  CG V  A  VF  A   +   +++N M+ G A   R +EA   F  M    L+
Sbjct: 250 LLDMYCKCGEVAYARSVF--ATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQ 307

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
              +T +++++AC        G  VH   ++  F  +  +  A + MY   GK++ +  I
Sbjct: 308 VEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKI 367

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFI 402
           F ++  K +VSWN MI+ Y  + +   AI  +LE+ +  + PD FT  +++ +    G +
Sbjct: 368 FGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSL 427

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
                IH+++   G   N  + NA++  YA++  +  + +IF  M  +++I+WNT+I G+
Sbjct: 428 RHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGY 487

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL--KNNLIS 520
            ++G     L+ F E+  + L+P+E T    L++C+ +S L     +H  ++  +  +I 
Sbjct: 488 AIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACS-VSGLVDEGWMHFNLMLQEYGMIP 546

Query: 521 KMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
           ++     M  L  + GDL   L+ + +M I+  +  W +L++A
Sbjct: 547 QIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTA 589



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 168/326 (51%), Gaps = 6/326 (1%)

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S + +   ++ G++DEA    A ++  D    N MI  +A   L   A+ AY  M   G 
Sbjct: 44  SKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPD FTF  ++   A  G ++     H  V   G+  ++   N+L++ YAK   ++ A +
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARIS 501
           +F  M  R+I+TWN +++G++ NG     L  F E+  + E++ D   +  AL++C    
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           S   GK+IHGYV+++ L   + +G +++ +Y KCG++  +  VF  M  +  ++WN +I 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIG 283

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            YA +    EA  CF  M+  G ++ +  T   +L+AC+       G  +   +V    F
Sbjct: 284 GYALNERPDEAFDCFMQMRAEG-LQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQ-F 341

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERV 647
           +P     + +L++ G+ G ++ +E++
Sbjct: 342 LPHVVLETALLEMYGKVGKVESSEKI 367



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 193/433 (44%), Gaps = 48/433 (11%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  F ++H + +++ D   +   LAAC    ++  G ++H Y +R GL+    V  ++L
Sbjct: 192 ALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLL 251

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y                                K G V YA  VF  MP R +  +N 
Sbjct: 252 DMY-------------------------------CKCGEVAYARSVFATMPLRTVVTWNC 280

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTK 216
           MI G   N   D     F +M    ++ +  +  ++L+ C   ++ L  +GR +H  V +
Sbjct: 281 MIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSL--YGRSVHGYVVR 338

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
             F   V +  AL+ MY   G V  + K+F +        +S+N M+          EA+
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTL--VSWNNMIAAYMYKEMYTEAI 396

Query: 277 IRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F ++L   L P   T  +V+ A +     R   Q+H+  +  G+   T + NA + MY
Sbjct: 397 TLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMY 456

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           +  G +  +  IF ++  KD++SWNTMI  YA    G++A+  + EM+  G++P+E TF 
Sbjct: 457 ARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFV 516

Query: 394 SLLASSGFIEMVE--MIHAFVFIN--GIITNIQVSNALISAYAKNERIKQAYQIFHNMS- 448
           S+L +     +V+   +H  + +   G+I  I+    +     +   +++  Q   +M  
Sbjct: 517 SVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPI 576

Query: 449 -PRNIITWNTLIN 460
            P + + W +L+ 
Sbjct: 577 DPTSRV-WGSLLT 588



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 39/266 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA--N 96
           +A   F+Q+ +   L+ ++ +    LAACA   ++ +G  +H Y +R   +  PHV    
Sbjct: 293 EAFDCFMQMRAE-GLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR--QFLPHVVLET 349

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            +L +Y     + S +++F +I N  + SW   ++A                       +
Sbjct: 350 ALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAY----------------------M 387

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVT 215
           Y  M T           I LF E+    +  D ++ ++V+ +    G L   RQ+HS + 
Sbjct: 388 YKEMYTE---------AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII 438

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
             G++    ++NA++ MY   G+VV + ++F+  K    D IS+N M+ G A  G+ + A
Sbjct: 439 GLGYAENTLIMNAVLHMYARSGDVVASREIFD--KMVSKDVISWNTMIMGYAIHGQGKTA 496

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC 301
           L  F +M    L+P+E TFVSV++AC
Sbjct: 497 LEMFDEMKYNGLQPNESTFVSVLTAC 522



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y +A+ LF+++  +  L PD +++ST + A   L +     Q+H+Y +  G      + N
Sbjct: 392 YTEAITLFLEL-LNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMN 450

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL-- 154
            +L +Y  + D+V+ + +F ++ + DV SW T +      G    A E+FD+M    L  
Sbjct: 451 AVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQP 510

Query: 155 --PVYNAMITGCTENGYEDIG 173
               + +++T C+ +G  D G
Sbjct: 511 NESTFVSVLTACSVSGLVDEG 531


>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 199/708 (28%), Positives = 356/708 (50%), Gaps = 76/708 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++  +  L PD Y +     AC  L  + FG  +H Y L+AGL    
Sbjct: 128 RIGLCEGALLGFVEMLENGVL-PDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCV 186

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y                                K G +D A  VFD++P+R
Sbjct: 187 FVASSLADMY-------------------------------GKCGVLDDARMVFDEIPER 215

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           ++  +NA++ G  +NG  +  I L  +M K  +     + ++ LS   + G +E G+Q H
Sbjct: 216 NVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSH 275

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  +++  Y   G +  A  +F+   G   D +++N+++ G    G 
Sbjct: 276 AIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGK--DIVTWNLLISGYVQQGL 333

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
           V++A+   + M + +LR   +T  ++MSA    +   +G +V   +++  FE+   ++++
Sbjct: 334 VDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLASS 393

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ CG I +A  +F    EKD++ WNT+++ YA   L   A+  + +M    + P 
Sbjct: 394 TVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDMLLESVPP- 452

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
                                          NI   N++I ++ +N ++ +A ++F  M 
Sbjct: 453 -------------------------------NIITWNSIILSFLRNGQVDEAKEMFLQMQ 481

Query: 449 PR----NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                 N+I+W T++NG++ NG   + +    ++  S LRP+ +T+SVALS+C  + SL 
Sbjct: 482 SSGIFPNLISWTTMMNGWVQNGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLN 541

Query: 505 HGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
            G+ IHGY+++N    S +S   +++ LYAKCGD++ + +VF   +  +    NA+ISAY
Sbjct: 542 FGRSIHGYIIRNFQHSSSVSFETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAY 601

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A +G  KE+++ ++ ++D+  +KPD  TFT++L AC+HAG +     IF  MV+ +   P
Sbjct: 602 ALYGNVKESITLYRRLEDMA-MKPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHDMKP 660

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H   M+D+L  +G  ++A  +I     +  +    +L ++C       L   ++  L
Sbjct: 661 CLEHYGLMVDILASSGETNKALELIEEMPYKPDARMIQSLVASCNKQHKTELVDYLSRQL 720

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LE E +    YV +SN YA  G W E   +RE++K  G+ K+PGCSWI
Sbjct: 721 LESEPENSGNYVTISNAYAIEGSWNEVMKMREMMKAKGLKKKPGCSWI 768



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 148/552 (26%), Positives = 261/552 (47%), Gaps = 18/552 (3%)

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSG--FSCLVSVVNALITM 232
           L +EM   +VR     +  +L  C     L  G+Q+H+ + K+G  ++    +   L+  
Sbjct: 35  LVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGAFYARNEYIETKLLIF 94

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  C  +  A  +F   +  V +  S+  ++     +G  E AL+ F +ML   + P   
Sbjct: 95  YAKCDALEVAQDLFSRLR--VRNVFSWAAIIGLKCRIGLCEGALLGFVEMLENGVLPDNY 152

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
              +V  AC        G  VH   +K+G      V+++   MY  CG +D+A M+F  +
Sbjct: 153 VVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVLDDARMVFDEI 212

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVE 406
            E+++V+WN ++  Y Q  +   AI    +M+  GI P   T  + L++S   G IE  +
Sbjct: 213 PERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMGGIEEGK 272

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
             HA   +NG+  +  +  ++++ Y K   I+ A  IF  +  ++I+TWN LI+G++  G
Sbjct: 273 QSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWNLLISGYVQQG 332

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
                +     + +  LR D  TLS  +S+ AR  +L  GK++  Y ++++  S++ L +
Sbjct: 333 LVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRHSFESEIVLAS 392

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           + + +YAKCG +  + +VF    EKD I WN L++AYA  G   EA+  F  M  +  + 
Sbjct: 393 STVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLFYDML-LESVP 451

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P+  T+ +++ +    G VD+   +F  M +  G  P     + M++   + G  +EA  
Sbjct: 452 PNIITWNSIILSFLRNGQVDEAKEMFLQMQSS-GIFPNLISWTTMMNGWVQNGCSEEAII 510

Query: 647 VINSQHIQARSDNWWAL---FSACAAHGNLRLGRIIAGLLLEREQDKPSV--YVLLSNIY 701
            +          N + +    SAC    +L  GR I G ++   Q   SV     L ++Y
Sbjct: 511 FLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVSFETSLVDLY 570

Query: 702 AAAGLWEEAANI 713
           A  G   +A  +
Sbjct: 571 AKCGDINQAEKV 582


>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
 gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
          Length = 698

 Score =  313 bits (803), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 191/621 (30%), Positives = 325/621 (52%), Gaps = 18/621 (2%)

Query: 126 WTTFLSACTKMGH---VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           W   L+A +  G    +  A  VFD++P  D   +N+++      G       L ++MH 
Sbjct: 29  WNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHA 88

Query: 183 LDVRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
             +    ++  S L    A    E G QL S   KSG    V   +AL+ +Y  CG + D
Sbjct: 89  RGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSD 148

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF+     V + +S+N ++ G A   +  +A+  F +M    L P + TF ++++  
Sbjct: 149 ARRVFDGMP--VRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATV 206

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
             P    +  Q+H +  K G      V NAAIT YS CG   ++  IF  +Q +D++SWN
Sbjct: 207 EGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWN 266

Query: 359 TMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLA---SSGFIE-MVEMIHAFVF 413
           +M+  YA   +   A+  ++ M +  G++PD ++F S+++     G  +     IH+ V 
Sbjct: 267 SMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVV 326

Query: 414 INGIITNIQVSNALISAYAK---NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
             G+     V NA+I+ Y +   N  ++ AY+ F ++  ++ ++WN+++ G+  +G    
Sbjct: 327 KIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSD 386

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F  +    +  DE+ LS AL SC+ ++ LR G+Q+H  V+++   S   + +++I 
Sbjct: 387 ALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIF 446

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y+KCG +  + + F    +  ++ WN+++  YAQHG+ +     F  M D  ++  D  
Sbjct: 447 MYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLD-HKVPLDHV 505

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF A+L+A SH GLVD+G+ I +SM   Y      +H +C +DL GRAG LD+A+ +I S
Sbjct: 506 TFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIES 565

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              Q  +  W  L  AC  HGN+ L   +A  L   E  + S YVLLS++Y+  G+W + 
Sbjct: 566 MPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDR 625

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A +++++K  G+ K PG SWI
Sbjct: 626 ATVQKVMKNRGLSKVPGWSWI 646



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 267/581 (45%), Gaps = 60/581 (10%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   I      S   LL  +++      +G ++DA  L   +H+   L    ++L + 
Sbjct: 49  RRVFDEIPRPDAVSWNSLLAAHVA------AGAHRDAWRLLKDMHA-RGLTASTFALGSA 101

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L + A  R    G QL ++A+++GL                      V  VFS     DV
Sbjct: 102 LRSAAAARRPELGAQLQSFAVKSGL----------------------VDNVFSASALLDV 139

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           Y+         K G +  A  VFD MP R+   +NA+I G  E+      + LF EM ++
Sbjct: 140 YA---------KCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRV 190

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           ++  D+ +FA++L+  +        +QLH  + K G +  + V+NA IT Y  CG   D+
Sbjct: 191 ELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADS 250

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSAC 301
            ++F+  +    D IS+N M+   A  G  +EA+  F R M  + ++P   +F SV+S C
Sbjct: 251 RRIFDGIQSR--DLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVC 308

Query: 302 L---C-PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI------FARLQE 351
               C  R G  +H+  +K G E  T V NA I MY+   +  E CM+      F  L  
Sbjct: 309 SEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYT---RFTENCMMEDAYKCFDSLVF 365

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           KD VSWN+M++ Y+   L   A+  +  M++  +  DEF   + L S   + ++ +   +
Sbjct: 366 KDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQV 425

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+ V  +G  +N  VS++LI  Y+K   +  A + F      + + WN+++ G+  +G  
Sbjct: 426 HSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQA 485

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNA 527
                 FSE+L  ++  D  T    L++ +    +  G +I +    +  +  +M     
Sbjct: 486 QTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYAC 545

Query: 528 MITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHG 567
            + LY + G LD +  +  +M  + D + W  L+ A   HG
Sbjct: 546 GVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHG 586



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 158/312 (50%), Gaps = 7/312 (2%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGK---IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           KSG  + T   N  +T YS+ G    +  A  +F  +   D VSWN++++ +      R 
Sbjct: 20  KSGATSPTPW-NQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRD 78

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALIS 429
           A     +M + G+    F  GS L S+      E+   + +F   +G++ N+  ++AL+ 
Sbjct: 79  AWRLLKDMHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLD 138

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK  R+  A ++F  M  RN ++WN LI G+  +  P Q ++ F E+   EL PD+ T
Sbjct: 139 VYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDAT 198

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            +  L++    S     +Q+HG + K      + + NA IT Y++CG    S R+F+ + 
Sbjct: 199 FAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQ 258

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            +D ISWN+++ AYA HG   EA+  F  M     ++PD  +FT+V+S CS  G  D   
Sbjct: 259 SRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQG 318

Query: 610 RIFDSMVNDYGF 621
           R   S+V   G 
Sbjct: 319 RSIHSLVVKIGL 330



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 219/512 (42%), Gaps = 50/512 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  + S     A+ LF+++    +L PD  + +  LA        +   QLH    
Sbjct: 165 NALIAGYAESRKPAQAMELFLEMQRV-ELVPDDATFAALLATVEGPSWYSLMQQLHGKIA 223

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G      V N  ++ Y         +R+F  IQ+ D+ SW + L A    G  D A  
Sbjct: 224 KYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMR 283

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
            F +M                              M +  V+ D YSF SV+SVC     
Sbjct: 284 FFVRM------------------------------MRESGVQPDMYSFTSVVSVCSEHGC 313

Query: 205 E--FGRQLHSLVTKSGFSCLVSVVNALITMYF----NCGNVVDACKVFEEAKGYVCDHIS 258
           +   GR +HSLV K G   +  V NA+I MY     NC  + DA K F+       D +S
Sbjct: 314 DDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENC-MMEDAYKCFDSL--VFKDAVS 370

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +N M+ G +  G   +AL  FR M   ++   E    + + +C      R+G QVH+  +
Sbjct: 371 WNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVI 430

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +SGF +   VS++ I MYS CG + +A   F    +   V WN+M+  YAQ    ++   
Sbjct: 431 QSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTD 490

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAY 431
            + EM    +  D  TF +LL +    G + E  E++++      I   ++     +  Y
Sbjct: 491 LFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLY 550

Query: 432 AKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
            +  ++ +A ++  +M  + + + W TL+    ++G         S L ++E  P +++ 
Sbjct: 551 GRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAE--PRQHST 608

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
            V LSS      +   +     V+KN  +SK+
Sbjct: 609 YVLLSSMYSGRGMWSDRATVQKVMKNRGLSKV 640


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/465 (34%), Positives = 267/465 (57%), Gaps = 11/465 (2%)

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           AL  F +M  +   P    F SV+ +C   +  R G  VH   ++ G +      NA + 
Sbjct: 89  ALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMN 148

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS    ID    +F  +  KD+VS+NT+I+ YAQ  +   A+    EM +  ++PD FT
Sbjct: 149 MYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFT 208

Query: 392 FGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
             S+L    F E V++     IH +V   GI +++ + ++L+  YAK+ RI+ + ++F +
Sbjct: 209 LSSVLPI--FSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSH 266

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +  R+ I+WN+L+ G++ NG   + L+ F +++ +++RP     S  + +CA +++L  G
Sbjct: 267 LYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLG 326

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           KQ+HGYVL+      + + +A++ +Y+KCG++  + ++F+ M   D +SW A+I  +A H
Sbjct: 327 KQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALH 386

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G EAVS F+ M+  G +KP+Q  F AVL+ACSH GLVD+    F+SM   YG     +
Sbjct: 387 GHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 445

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H + + DLLGRAG L+EA   I+   ++     W  L S+C+ H NL L   +A  +   
Sbjct: 446 HYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTI 505

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +    YVL+ N+YA+ G W+E A +R  +++ G+ K+P CSWI
Sbjct: 506 DSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWI 550



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 206/435 (47%), Gaps = 47/435 (10%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +  AL  FV++ +S +  PD     + L +C  + +  FG  +H + +R G+    +  N
Sbjct: 86  FSRALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++++Y     + SV++VF                               + MP +D+  
Sbjct: 145 ALMNMYSKLLGIDSVRKVF-------------------------------ELMPRKDVVS 173

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLV 214
           YN +I G  ++G  +  + + REM   D++ D ++ +SVL +      +L+ G+++H  V
Sbjct: 174 YNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLK-GKEIHGYV 232

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            + G    V + ++L+ MY     + D+ +VF     Y  D IS+N ++ G    GR  E
Sbjct: 233 IRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL--YRRDSISWNSLVAGYVQNGRYNE 290

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           AL  FR M+ A +RP  + F SV+ AC       +G Q+H   ++ GF     +++A + 
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS CG I  A  IF R+   D VSW  +I  +A    G  A+  + EM+  G++P++  
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410

Query: 392 FGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           F ++L +   + +V+      ++   + G+   ++   A+     +  ++++AY     M
Sbjct: 411 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKM 470

Query: 448 --SPRNIITWNTLIN 460
              P   + W+TL++
Sbjct: 471 RVEPTGSV-WSTLLS 484



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 171/353 (48%), Gaps = 48/353 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +A  ++SG Y+DAL +  ++ +S  LKPD ++LS+ L   +   +   G ++H
Sbjct: 171 VVSYNTVIAGYAQSGMYEDALRMVREMGTS-DLKPDAFTLSSVLPIFSEYVDVLKGKEIH 229

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y +R G+ +  ++ ++++ +Y  +  +   +RVFS +   D  SW              
Sbjct: 230 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISW-------------- 275

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                            N+++ G  +NG  +  + LFR+M    VR    +F+SV+  C 
Sbjct: 276 -----------------NSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACA 318

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L  G+QLH  V + GF   + + +AL+ MY  CGN+  A K+F+     + D +S+
Sbjct: 319 HLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMN--LHDEVSW 376

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGY---QVH 311
             ++ G A  G   EA+  F +M    ++P+++ FV+V++AC     +    GY      
Sbjct: 377 TAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS-WNTMIST 363
              +    E Y +V++    +    GK++EA    ++++ +   S W+T++S+
Sbjct: 437 VYGLNQELEHYAAVAD----LLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSS 485



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 14/265 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A   ++G Y +AL LF Q+ S+ K++P   + S+ + ACA+L     G QLH Y L
Sbjct: 276 NSLVAGYVQNGRYNEALRLFRQMVSA-KVRPGAVAFSSVIPACAHLATLHLGKQLHGYVL 334

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G      +A+ ++ +Y    ++ + +++F  +   D  SWT  +      GH   A  
Sbjct: 335 RGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVS 394

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASVLS 197
           +F++M  + +      + A++T C+  G  D   G F  M K   L+   ++Y+  + L 
Sbjct: 395 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADL- 453

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           +  AG LE   + +  ++K       SV + L++      N+  A KV E+      +++
Sbjct: 454 LGRAGKLE---EAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENM 510

Query: 258 -SYNVMMDGLASVGRVEE-ALIRFR 280
            +Y +M +  AS GR +E A +R R
Sbjct: 511 GAYVLMCNMYASNGRWKEMAKLRLR 535


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 195/603 (32%), Positives = 313/603 (51%), Gaps = 15/603 (2%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASVLS 197
           +A ++F++ P + + ++NA++      G     + LF +M+     + R DNY+ +  L 
Sbjct: 54  HAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALK 113

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C +GL  LE G+ +H  + K      + V +ALI +Y  CG + DA KVF E      D
Sbjct: 114 SC-SGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQ--D 170

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVGYQVH 311
            + +  ++ G    G  E AL  F  M+V   + P  +T VS  SAC       +G  VH
Sbjct: 171 VVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVH 230

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               + GF+    ++N+ + +Y   G I  A  +F  +  KDI+SW++M++ YA      
Sbjct: 231 GFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAET 290

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           +A+  + EM    I  +  T  S L   ASS  +E  + IH      G   +I VS AL+
Sbjct: 291 NALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALM 350

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K    K A  +F+ M  +++++W  L +G+   G   + L  F  +L    RPD  
Sbjct: 351 DMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAI 410

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
            L   L++ + +  ++    +H +V K+   +   +G ++I LYAKC  +D + +VF  M
Sbjct: 411 ALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGM 470

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             KD ++W+++I+AY  HG+G+EA+  F  M +   +KP+  TF ++LSACSHAGL+++G
Sbjct: 471 RRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            ++F  MVN+Y  +P  +H   M+DLLGR G LD+A  +IN   +QA    W AL  AC 
Sbjct: 531 IKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACR 590

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H N+++G + A  L   + +    Y LLSNIY     W +AA +R L+K     K  G 
Sbjct: 591 IHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQ 650

Query: 729 SWI 731
           S +
Sbjct: 651 SMV 653



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 251/546 (45%), Gaps = 48/546 (8%)

Query: 35  GHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           G + + L LF Q+++    + +PD Y++S  L +C+ L+    G  +H +  +  +    
Sbjct: 81  GKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDM 140

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V + ++ LY     +    +VF+E    DV  WT+                        
Sbjct: 141 FVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTS------------------------ 176

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF--GRQ 209
                  +ITG  +NG  ++ +  F  M  L+ V  D  +  S  S C A L +F  GR 
Sbjct: 177 -------IITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASAC-AQLSDFNLGRS 228

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H  V + GF   + + N+++ +Y   G++  A  +F E      D IS++ M+   A  
Sbjct: 229 VHGFVKRRGFDTKLCLANSILNLYGKTGSIRSAANLFREMP--YKDIISWSSMVACYADN 286

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G    AL  F +M+   +  + +T +S + AC        G  +H  A+  GFE   +VS
Sbjct: 287 GAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVS 346

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A + MY  C     A  +F R+ +KD+VSW  + S YA+  +   ++  +  M S G R
Sbjct: 347 TALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTR 406

Query: 387 PDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD      +LA+S   G ++    +HAFV  +G   N  +  +LI  YAK   I  A ++
Sbjct: 407 PDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKV 466

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISS 502
           F  M  ++++TW+++I  +  +G   + L+ F ++   S+++P++ T    LS+C+    
Sbjct: 467 FKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGL 526

Query: 503 LRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALI 560
           +  G K  H  V +  L+        M+ L  + G+LD +L + N M ++     W AL+
Sbjct: 527 IEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALL 586

Query: 561 SAYAQH 566
            A   H
Sbjct: 587 GACRIH 592



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 233/519 (44%), Gaps = 27/519 (5%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLA 267
           QLHS   K G +    VV  L  +Y    ++  A K+FEE     C  +  +N ++    
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETP---CKTVYLWNALLRSYF 78

Query: 268 SVGRVEEALIRFRDM---LVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
             G+  E L  F  M    +   RP   T    + +C   +   +G  +H    K   + 
Sbjct: 79  LEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDN 138

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +A I +YS CG++++A  +F    ++D+V W ++I+ Y Q      A+  +  M 
Sbjct: 139 DMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMV 198

Query: 382 SV-GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNE 435
            +  + PD  T  S  A+S   ++ +      +H FV   G  T + ++N++++ Y K  
Sbjct: 199 VLEQVSPDPVTLVS--AASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTG 256

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+ A  +F  M  ++II+W++++  +  NG     L  F+E++   +  +  T+  AL 
Sbjct: 257 SIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALR 316

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +CA  S+L  GK IH   +       +++  A++ +Y KC     ++ +FN M +KD +S
Sbjct: 317 ACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVS 376

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  L S YA+ G   +++  F  M   G  +PD      +L+A S  G+V        + 
Sbjct: 377 WAVLFSGYAEIGMAHKSLGVFCNMLSYG-TRPDAIALVKILAASSELGIVQQAL-CLHAF 434

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNL 673
           V+  GF   E   + +++L  +   +D A +V        R D   W ++ +A   HG  
Sbjct: 435 VSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMR---RKDVVTWSSIIAAYGFHGQG 491

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
                +   +      KP+    +S + A   AGL EE 
Sbjct: 492 EEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 530



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 192/424 (45%), Gaps = 42/424 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  + AL  F ++    ++ PD  +L +  +ACA L +   G  +H +  R G     
Sbjct: 183 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 242

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +AN+IL+LY     + S   +F E+   D+ SW++                        
Sbjct: 243 CLANSILNLYGKTGSIRSAANLFREMPYKDIISWSS------------------------ 278

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                  M+    +NG E   + LF EM    +  +  +  S L  C  +  LE G+ +H
Sbjct: 279 -------MVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIH 331

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L    GF   ++V  AL+ MY  C +  +A  +F        D +S+ V+  G A +G 
Sbjct: 332 KLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKK--DVVSWAVLFSGYAEIGM 389

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNA 328
             ++L  F +ML    RP  +  V +++A     +  Q   +HA   KSGF+    +  +
Sbjct: 390 AHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGAS 449

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRP 387
            I +Y+ C  ID A  +F  ++ KD+V+W+++I+ Y     G  A+  + +M +   ++P
Sbjct: 450 LIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKP 509

Query: 388 DEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           ++ TF S+L++   +G IE  ++M H  V    ++ N +    ++    +   + +A  +
Sbjct: 510 NDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDM 569

Query: 444 FHNM 447
            + M
Sbjct: 570 INEM 573



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 136/268 (50%), Gaps = 6/268 (2%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           +  +H+     G+  +  V   L   YA+   +  A+++F     + +  WN L+  + L
Sbjct: 20  IPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFL 79

Query: 465 NGFPVQGLQHFSEL---LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            G  V+ L  F ++    ++E RPD YT+S+AL SC+ +  L  GK IHG++ K  + + 
Sbjct: 80  EGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDND 139

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           M +G+A+I LY+KCG ++ +++VF    ++D + W ++I+ Y Q+G  + A++ F  M  
Sbjct: 140 MFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           + ++ PD  T  +  SAC+     + G R     V   GF       + +L+L G+ G +
Sbjct: 200 LEQVSPDPVTLVSAASACAQLSDFNLG-RSVHGFVKRRGFDTKLCLANSILNLYGKTGSI 258

Query: 642 DEAERVINSQHIQARSDNWWALFSACAA 669
             A  +   + +  +    W+   AC A
Sbjct: 259 RSAANLF--REMPYKDIISWSSMVACYA 284



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 22/237 (9%)

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           + C++IS      Q+H   LK  L     +   +  LYA+   L  + ++F     K   
Sbjct: 13  TCCSKISI----PQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVY 68

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQ--DVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            WNAL+ +Y   G+  E +S F  M    +   +PD  T +  L +CS    ++ G  I 
Sbjct: 69  LWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMI- 127

Query: 613 DSMVNDYGFIPAE----DHL--SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
                 +GF+  +    D    S +++L  + G +++A +V  +++ +     W ++ + 
Sbjct: 128 ------HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVF-TEYPKQDVVLWTSIITG 180

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL--WEEAANIRELLKRTG 721
              +G+  L       ++  EQ  P    L+S   A A L  +    ++   +KR G
Sbjct: 181 YEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRG 237


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 304/621 (48%), Gaps = 93/621 (14%)

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           C +  + + R+L   + K      +     L++ Y + GNV  A ++F      + D +S
Sbjct: 51  CKSSNITYARKLFDKIPKPD----IVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVS 106

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQA 314
           YN M+   +       AL  F  M      P   TF SV+SA        R    +H + 
Sbjct: 107 YNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEV 166

Query: 315 MKSGFEAYTSVSNAAITMYSSCGK----------------IDEA-----------CMIFA 347
           +K G     SV+NA ++ Y  C                   DE             MI  
Sbjct: 167 IKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAG 226

Query: 348 RLQEKDIVS---------------WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
            ++  D+V+               WN MIS Y +R L   A   +  M S+GI+ DE+T+
Sbjct: 227 YVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTY 286

Query: 393 GSLLASSG-------------------FIEMVEMIHAFVFI--NGIIT------------ 419
            SL+++ G                      +VE  H FV    N +IT            
Sbjct: 287 TSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEAR 346

Query: 420 ---------NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                    +I   NA++S Y   +RI++A  IF  M  RN++TW  +I+G   NGF  +
Sbjct: 347 RVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEE 406

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
           GL+ F+++    L P +Y  + A+++C+ + SL +G+QIH  V++    S +S GNA+IT
Sbjct: 407 GLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALIT 466

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y++CG ++ +  VF  M   D++SWNA+I+A AQHG G +A+  F+ M     I PD+ 
Sbjct: 467 MYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKED-ILPDRI 525

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +L+AC+HAGL+ +G   FD+M   YG  P EDH + ++DLL RAG   +A+ VI S
Sbjct: 526 TFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKS 585

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
              +A +  W AL + C  HGN+ LG   A  LLE    +   Y++LSN+YAA G W+E 
Sbjct: 586 MPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEV 645

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
           A +R L++  GV K+PGCSW+
Sbjct: 646 ARVRLLMRERGVKKEPGCSWV 666



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 148/586 (25%), Positives = 255/586 (43%), Gaps = 103/586 (17%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +HA+ L +G K    + N ++++Y  + ++   +++F +I  PD+ + TT LSA +  G+
Sbjct: 27  VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86

Query: 139 VDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           V  A ++F+  P   RD   YNAMIT  +        + LF +M +     D ++F+SVL
Sbjct: 87  VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146

Query: 197 SVCD--AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN---------VVDACKV 245
           S     A      + LH  V K G   + SV NAL++ Y  C +         +  A KV
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206

Query: 246 FEEAK--------------GYVCD-----------------HISYNVMMDGLASVGRVEE 274
           F+E                GYV +                  +++N M+ G    G  EE
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC-LCPR------VGYQVHAQAMKSGFEA----YT 323
           A   FR M    ++  E T+ S++SAC  C         G QVH   +++  E       
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVL 326

Query: 324 SVSNAAITMYS-------------------------------SCGKIDEACMIFARLQEK 352
           SV+NA IT Y+                               +  +I+EA  IF+ + E+
Sbjct: 327 SVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPER 386

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIH 409
           ++++W  MIS  AQ   G   +  + +M+S G+ P ++ F G++ A S  G ++  + IH
Sbjct: 387 NVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIH 446

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           + V   G  + +   NALI+ Y++   ++ A  +F  M   + ++WN +I     +G  V
Sbjct: 447 SQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGV 506

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           + ++ F +++  ++ PD  T    L++C     ++ G+     +     I+         
Sbjct: 507 KAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGE------ 560

Query: 530 TLYAKCGDLDCSLRVF--------NMMIEKDTISWNALISAYAQHG 567
             YA+  DL C   +F        +M  E     W AL++    HG
Sbjct: 561 DHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHG 606



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 193/412 (46%), Gaps = 54/412 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ-LHAYALRAGLKAYPHVANTI 98
           AL+LFVQ+   +   PD ++ S+ L+A + + +     Q LH   ++ G    P V N +
Sbjct: 123 ALNLFVQM-KRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNAL 181

Query: 99  LSLY---------KNARDLVSVKRVFSEIQNPDVY--SWTTFLSACTKMGHVDYACEVFD 147
           LS Y         K+++ + S ++VF E     +Y  SWTT ++   +   +  A E+ D
Sbjct: 182 LSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLD 241

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-----G 202
            +       +NAMI+G    G  +     FR MH + ++ D Y++ S++S C +     G
Sbjct: 242 GLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMG 301

Query: 203 LLEFGRQLHSLVTKS----GFSCLVSVVNALITMYFNCGNVVDACKVFEEAK-------- 250
           +   GRQ+H  + ++        ++SV NALIT Y     +++A +VF++          
Sbjct: 302 MFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWN 361

Query: 251 ----GYVCDH-----------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
               GYV                    +++ VM+ GLA  G  EE L  F  M    L P
Sbjct: 362 AVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEP 421

Query: 290 SELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            +  F   ++AC        G Q+H+Q ++ G ++  S  NA ITMYS CG ++ A  +F
Sbjct: 422 CDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVF 481

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
             +   D VSWN MI+  AQ   G  AI  + +M    I PD  TF ++L +
Sbjct: 482 LTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTA 533



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 152/286 (53%), Gaps = 12/286 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACA--NLRNAAF--GNQLH 80
           N  ++   R G Y++A   F ++HS   ++ D Y+ ++ ++AC   N +   F  G Q+H
Sbjct: 252 NAMISGYVRRGLYEEAFDTFRRMHSM-GIQEDEYTYTSLISACGSCNEKMGMFNCGRQVH 310

Query: 81  AYALRAGLKAYPH----VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            Y LR  ++   H    V N +++ Y     ++  +RVF ++   D+ SW   LS     
Sbjct: 311 GYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNA 370

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
             ++ A  +F +MP+R++  +  MI+G  +NG+ + G+ LF +M    +   +Y+FA  +
Sbjct: 371 QRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAI 430

Query: 197 SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
           + C   G L+ G+Q+HS V + G    +S  NALITMY  CG V  A  VF     YV D
Sbjct: 431 TACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMP-YV-D 488

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            +S+N M+  LA  G   +A+  F  M+   + P  +TF+++++AC
Sbjct: 489 SVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTAC 534



 Score = 48.5 bits (114), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
            + +H ++L +       + N +I +Y K  ++  + ++F+ + + D ++   L+SAY+ 
Sbjct: 24  ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G  K A   F A     R   D  ++ A+++A SH         +F  M   YGF+P  
Sbjct: 84  SGNVKLAQQLFNATPLTIR---DTVSYNAMITAYSHGNDGHAALNLFVQM-KRYGFLPDP 139

Query: 626 DHLSCMLDLL 635
              S +L  L
Sbjct: 140 FTFSSVLSAL 149


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 200/600 (33%), Positives = 324/600 (54%), Gaps = 18/600 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +D A  VFD M  RD   +N MI G    G  D G+  FR+   +    +  +   
Sbjct: 82  KTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVL 141

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            +  C + G +E G ++H  + +SGF  + SV N+L++MY +  ++  A ++F+E    +
Sbjct: 142 AIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE----M 196

Query: 254 C--DHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVG 307
           C  D IS++VM+ G    G  + AL  F +M   AS+    +T VSV+ AC       +G
Sbjct: 197 CERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMG 256

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VH   +  G +    V N+ I MYS C   + A   F  +  ++ VSWN++IS   + 
Sbjct: 257 RSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRT 316

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVS 424
                A+  +  M   G R DE T  +LL S  +       + IH+ V   G   N  V 
Sbjct: 317 EKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVI 376

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N+LI AY+K + I+ A+++F  +  ++ ++W+ +I GF   G P + +  F E+  ++ +
Sbjct: 377 NSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEK 436

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P+  T+   L + +  + L+  K  HG  ++  L +++++G A++ +YAKCG++  S + 
Sbjct: 437 PNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKA 496

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ + EK+ +SW A+I+A   +G  ++A++    M+  G +KP+  T  +VLSACSH GL
Sbjct: 497 FDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHG-LKPNVVTTLSVLSACSHGGL 555

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWA 662
           V++G   F++MV D+G  P  +H SCM+D+L RAG L+ A  +I     + R     W A
Sbjct: 556 VEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGA 615

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L SAC + GN RLG   A  +LE E    + Y L S++YAA+GLW +AA +R L+K  GV
Sbjct: 616 LLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGV 675



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 256/522 (49%), Gaps = 23/522 (4%)

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF  L S  N+++  Y   G +  A  VF+  +    D +S+N+M+ G  S G  ++ L 
Sbjct: 65  GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSR--DSVSWNIMIHGHLSRGASDKGLW 122

Query: 278 RFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            FR   V +  P+  T V  + AC        G ++H   ++SGF    SV N+ ++MY+
Sbjct: 123 WFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA 182

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFG 393
               ++ A  +F  + E+D++SW+ MI  Y Q    + A+  +LEM S   I  D  T  
Sbjct: 183 D-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMV 241

Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           S+L   A++G I M   +H  V   G+  ++ V N++I  Y+K +  + A++ F+ M  R
Sbjct: 242 SVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCR 301

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N ++WN++I+G +      + L  F  +  +  R DE TL   L SC         K IH
Sbjct: 302 NTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIH 361

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             V++        + N++I  Y+KC  ++ + ++F+ +  KDT+SW+A+I+ +   G+  
Sbjct: 362 SIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPD 421

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           EA++ F+ M    + KP+  T  ++L A S +  +   ++    +    G        + 
Sbjct: 422 EAIALFQEMNQ-AQEKPNGVTILSLLEAFSVSADLKR-SKWAHGIAIRRGLAAEVAVGTA 479

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD- 689
           +LD+  + G +  + +  + Q  +    +W A+ +AC  +G   L R    LL E +   
Sbjct: 480 ILDMYAKCGEIGLSRKAFD-QIPEKNIVSWGAMIAACGMNG---LARDALALLSEMKLHG 535

Query: 690 -KPSVYVLLSNIYAAA--GLWEEAANIRE-LLKRTGVIKQPG 727
            KP+V   LS + A +  GL EE  +  E +++  GV  +PG
Sbjct: 536 LKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGV--EPG 575



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 145/574 (25%), Positives = 256/574 (44%), Gaps = 54/574 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
            +P++ +L   + AC +L     G ++H Y +R+G    P V N++LS+Y +  D+   +
Sbjct: 132 FEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAE 190

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            +F E+   DV SW+                                MI G  + G   +
Sbjct: 191 ELFDEMCERDVISWSV-------------------------------MIGGYVQTGEAKM 219

Query: 173 GIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
            + LF EM     +  D  +  SVL  C + G +  GR +H +V   G    + V N++I
Sbjct: 220 ALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSII 279

Query: 231 TMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            MY  C +   A K F E     C + +S+N ++ GL    +  EAL  F  M  A  R 
Sbjct: 280 DMYSKCDDHESAFKAFNEMP---CRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRA 336

Query: 290 SELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            E+T V+++ +C   + P     +H+  ++ G+E    V N+ I  YS C  I+ A  +F
Sbjct: 337 DEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLF 396

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
            RL+ KD VSW+ MI+ +        AI  + EM     +P+  T  SLL +   S  ++
Sbjct: 397 DRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLK 456

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
             +  H      G+   + V  A++  YAK   I  + + F  +  +NI++W  +I    
Sbjct: 457 RSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACG 516

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-M 522
           +NG     L   SE+ +  L+P+  T    LS+C+    +  G      +++++ +   +
Sbjct: 517 MNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGL 576

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGK-EAVSCFKA 578
              + M+ + ++ G L+ ++ +   M E+       W AL+SA    G  +  A + F+ 
Sbjct: 577 EHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRV 636

Query: 579 MQDVGRIKPD-QATFTAVLSACSHAGLVDDGTRI 611
           ++    ++P   A +    S  + +GL  D  R+
Sbjct: 637 LE----LEPQSSAGYFLASSMYAASGLWADAARM 666



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 219/455 (48%), Gaps = 36/455 (7%)

Query: 274 EALIRFRDMLVASLRPSELTFV-SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           EA  R+  M  A  + ++ T V S++ AC            +   GF++ TS  N+ +  
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKAC------------SSLPGFDSLTSTGNSVLDF 79

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y   G +D A  +F  ++ +D VSWN MI  +  R      +  + + + +   P+  T 
Sbjct: 80  YMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTL 139

Query: 393 GSLLA-----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
             +LA     S G +E    +H ++  +G +    V N+L+S YA N+ +++A ++F  M
Sbjct: 140 --VLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYADND-MERAEELFDEM 196

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHG 506
             R++I+W+ +I G++  G     LQ F E+   + +  D  T+   L +CA    +  G
Sbjct: 197 CERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMG 256

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + +HG V+   L   + +GN++I +Y+KC D + + + FN M  ++T+SWN++IS   + 
Sbjct: 257 RSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRT 316

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD-GTRIFDSMVNDYGFIPAE 625
            +  EA+S F +M   G  + D+ T   +L +C +   VD    +   S+V  +G+   E
Sbjct: 317 EKHSEALSLFYSMGKAG-FRADEVTLVNLLQSCKY--FVDPFQCKFIHSIVIRWGYELNE 373

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
             ++ ++D   +   ++ A ++ +   ++ +    W+   A   H       I     + 
Sbjct: 374 FVINSLIDAYSKCDLIELAWKLFD--RLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMN 431

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
           + Q+KP+   +LS +        EA ++   LKR+
Sbjct: 432 QAQEKPNGVTILSLL--------EAFSVSADLKRS 458



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 200/438 (45%), Gaps = 41/438 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  ++ +    ++G  + AL LF+++ S+  ++ D  ++ + L ACAN  + + G  +H
Sbjct: 201 VISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVH 260

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              +  GL     V N+I+ +Y    D  S  + F+E                       
Sbjct: 261 GVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNE----------------------- 297

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                   MP R+   +N++I+G          + LF  M K   R D  +  ++L  C 
Sbjct: 298 --------MPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCK 349

Query: 201 AGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             +  F  + +HS+V + G+     V+N+LI  Y  C  +  A K+F+  K    D +S+
Sbjct: 350 YFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTK--DTVSW 407

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK 316
           + M+ G    G+ +EA+  F++M  A  +P+ +T +S++ A       +     H  A++
Sbjct: 408 SAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIR 467

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G  A  +V  A + MY+ CG+I  +   F ++ EK+IVSW  MI+      L R A+  
Sbjct: 468 RGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALAL 527

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF----VFINGIITNIQVSNALISAYA 432
             EM+  G++P+  T  S+L++     +VE   +F    V  +G+   ++  + ++   +
Sbjct: 528 LSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLS 587

Query: 433 KNERIKQAYQIFHNMSPR 450
           +  ++  A  +   M  R
Sbjct: 588 RAGKLNSAMNLIEKMPER 605



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 84/387 (21%), Positives = 164/387 (42%), Gaps = 53/387 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L R+  + +AL LF  +  +   + D  +L   L +C    +      +H+  +
Sbjct: 307 NSIISGLVRTEKHSEALSLFYSMGKA-GFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVI 365

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G +    V N+++  Y                               +K   ++ A +
Sbjct: 366 RWGYELNEFVINSLIDAY-------------------------------SKCDLIELAWK 394

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           +FD++  +D   ++AMI G    G  D  I LF+EM++   + +  +  S+L        
Sbjct: 395 LFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSAD 454

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+  +  H +  + G +  V+V  A++ MY  CG +  + K F++      + +S+  M+
Sbjct: 455 LKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEK--NIVSWGAMI 512

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAM 315
                 G   +AL    +M +  L+P+ +T +SV+SAC    +  +        V    +
Sbjct: 513 AACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGV 572

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK---DIVSWNTMISTYAQRNLGRS 372
           + G E Y+ +    + M S  GK++ A  +  ++ E+       W  ++S  A R+ G S
Sbjct: 573 EPGLEHYSCM----VDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLS--ACRSSGNS 626

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS 399
            + A    + + + P   + G  LASS
Sbjct: 627 RLGAGAAFRVLELEPQS-SAGYFLASS 652


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/564 (31%), Positives = 299/564 (53%), Gaps = 46/564 (8%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            +QLH+ + ++      S+++ ++++Y N   + D+  +F          +++  ++   
Sbjct: 24  AKQLHAQILRTSLPS-PSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTT-LAWKSIIRCY 81

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK--SGFEA 321
            S G    +L  F  ML +   P    F SV+ +C      R G  VH   ++   GF+ 
Sbjct: 82  TSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDL 141

Query: 322 YTSVSNAAITMYSSCGKIDEACM-----------------------------IFARLQEK 352
           YT   NA + MYS    ++E                                +F  + ++
Sbjct: 142 YTC--NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKR 199

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM----- 407
           DIVSWNT+IS  AQ  +   A++   EM +  +RPD FT  S+L    F E V +     
Sbjct: 200 DIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI--FAEYVNLLKGKE 257

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH +   NG   ++ + ++LI  YAK  R+  + ++F+ +   + I+WN++I G + NG 
Sbjct: 258 IHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGM 317

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             +GL+ F ++L+++++P+  + S  + +CA +++L  GKQ+HGY++++     + + +A
Sbjct: 318 FDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASA 377

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +YAKCG++  +  +F+ M   D +SW A+I  YA HG   +A+S FK M+  G +KP
Sbjct: 378 LVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEG-VKP 436

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           +   F AVL+ACSHAGLVD+  + F+SM  DY  IP  +H + + DLLGR G L+EA   
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEF 496

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I+  HI+     W  L +AC  H N+ L   ++  L   +      YVLLSNIY+AAG W
Sbjct: 497 ISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRW 556

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++A  +R  ++  G+ K+P CSWI
Sbjct: 557 KDARKLRIAMRDKGMKKKPACSWI 580



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 227/445 (51%), Gaps = 36/445 (8%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G +  +L  F+Q+ +S K  PD     + L +C  +++  FG  +H   +R G+    + 
Sbjct: 85  GLFLHSLSFFIQMLASGKY-PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYT 143

Query: 95  ANTILSLYKNARDLVSV---KRVFSEIQNPDVYS----WTTFLSACTKMGHVDYACEVFD 147
            N ++++Y     L  V   K+VF E +  DVYS     + +L +  K         VF+
Sbjct: 144 CNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRK---------VFE 194

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLE 205
            MP RD+  +N +I+G  +NG  +  + + REM   D+R D+++ +SVL +      LL+
Sbjct: 195 MMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK 254

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+++H    ++G+   V + ++LI MY  C  V D+C+VF     +  D IS+N ++ G
Sbjct: 255 -GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQH--DGISWNSIIAG 311

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAY 322
               G  +E L  F+ ML+A ++P+ ++F S+M AC       +G Q+H   ++S F+  
Sbjct: 312 CVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGN 371

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             +++A + MY+ CG I  A  IF +++  D+VSW  MI  YA       AI  +  M+ 
Sbjct: 372 VFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEV 431

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFING------IITNIQVSNALISAYAKNER 436
            G++P+   F ++L +     +V+   A+ + N       II  ++   A+     +  R
Sbjct: 432 EGVKPNYVAFMAVLTACSHAGLVD--EAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 489

Query: 437 IKQAYQIFHNM--SPRNIITWNTLI 459
           +++AY+   +M   P   + W+TL+
Sbjct: 490 LEEAYEFISDMHIEPTGSV-WSTLL 513



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 146/667 (21%), Positives = 276/667 (41%), Gaps = 113/667 (16%)

Query: 62  TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           T L   +++++ +   QLHA  LR  L + P + +TILS+Y N   L     +F+ + +P
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPS-PSLLSTILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 122 DV-YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
               +W + +   T  G   ++   F +M                   Y D  +      
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQM--------------LASGKYPDHNV------ 108

Query: 181 HKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY---FNC 236
                      F SVL  C     L FG  +H  + + G    +   NAL+ MY   ++ 
Sbjct: 109 -----------FPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSL 157

Query: 237 GNVVDACKVFEEAK-----------GYVC-------------DHISYNVMMDGLASVGRV 272
             V    KVF+E K            Y               D +S+N ++ G A  G  
Sbjct: 158 EEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMH 217

Query: 273 EEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           E+AL+  R+M  A LRP   T  SV+   +  +    G ++H  A+++G++A   + ++ 
Sbjct: 218 EDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSL 277

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I MY+ C ++D++C +F  L + D +SWN++I+   Q  +    +  + +M    I+P+ 
Sbjct: 278 IDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNH 337

Query: 390 FTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            +F S++ +   +  + +   +H ++  +    N+ +++AL+  YAK   I+ A  IF  
Sbjct: 338 VSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDK 397

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M   ++++W  +I G+ L+G     +  F  + +  ++P+       L++C+    +   
Sbjct: 398 MELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEA 457

Query: 507 -KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA-- 562
            K  +       +I  +    A+  L  + G L+ +   + +M IE     W+ L++A  
Sbjct: 458 WKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACR 517

Query: 563 --------------------------------YAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
                                           Y+  G  K+A     AM+D G  K    
Sbjct: 518 VHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPAC 577

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY-LDEAERVIN 649
           ++  + +   HA +  D +  +   +N        + L  +L+ + R GY LD  E + +
Sbjct: 578 SWIEIKNKV-HAFVAGDKSHPYYDRIN--------EALKVLLEQMEREGYVLDTTEVLHD 628

Query: 650 SQHIQAR 656
            +  Q R
Sbjct: 629 VEEEQKR 635



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 138/288 (47%), Gaps = 38/288 (13%)

Query: 19  ELLLKLNISLANLSRSGHYQDALH----LFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           E++ K +I   N   SG+ Q+ +H    + V+   +  L+PD ++LS+ L   A   N  
Sbjct: 194 EMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLL 253

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H YA+R G  A   + ++++ +Y     +    RVF  +   D  SW + ++ C 
Sbjct: 254 KGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGC- 312

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                          +NG  D G+  F++M    ++ ++ SF+S
Sbjct: 313 ------------------------------VQNGMFDEGLKFFQQMLIAKIKPNHVSFSS 342

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           ++  C     L  G+QLH  + +S F   V + +AL+ MY  CGN+  A  +F++ + Y 
Sbjct: 343 IMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY- 401

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            D +S+  M+ G A  G   +A+  F+ M V  ++P+ + F++V++AC
Sbjct: 402 -DMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTAC 448



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 5/160 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A   ++G + + L  F Q+  + K+KP+  S S+ + ACA+L     G QLH Y +
Sbjct: 306 NSIIAGCVQNGMFDEGLKFFQQMLIA-KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 364

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+       +A+ ++ +Y    ++ + + +F +++  D+ SWT  +      GH   A  
Sbjct: 365 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAIS 424

Query: 145 VFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           +F +M       +   + A++T C+  G  D     F  M
Sbjct: 425 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSM 464


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/516 (34%), Positives = 275/516 (53%), Gaps = 40/516 (7%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           + + +N M+ G A       AL  +  M+   L P+  TF  ++ +C   +    G Q+H
Sbjct: 30  NQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIH 89

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR----------------------- 348
              +K G+E    V  + I+MY+  G++++A  +F R                       
Sbjct: 90  GHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIR 149

Query: 349 -LQE-------KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
             QE       KD+VSWN MIS YA+    + A+  + EM    +RPDE T  ++L   A
Sbjct: 150 SAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACA 209

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            S  +E+   +H+++  +G  +N+++ NALI  Y+K  +++ A  +F  +S +++++WNT
Sbjct: 210 QSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNT 269

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           LI G+       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K  
Sbjct: 270 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKL 329

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
            ++ +  SL  ++I +YAKCGD++ + +VFN M+ K   SWNA+I  +A HG        
Sbjct: 330 KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M+  G I+PD  TF  +LSACSH+G +D G  IF SM  DY   P  +H  CM+DLL
Sbjct: 390 FSRMRKNG-IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLL 448

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           G +G   EA+ +I +  ++     W +L  AC  HGNL L    A  L++ E + P  YV
Sbjct: 449 GHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYV 508

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSNIYA AG W+E A +R LL   G+ K PGCS I
Sbjct: 509 LLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSI 544



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 250/514 (48%), Gaps = 46/514 (8%)

Query: 127 TTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
           +  L  C    H D   YA  VF  + + +  ++N M+ G   +      + L+  M  L
Sbjct: 1   SKLLEFCVLSPHFDGFPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISL 60

Query: 184 DVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            +  ++Y+F  +L  C  +   E G+Q+H  V K G+   + V  +LI+MY   G + DA
Sbjct: 61  GLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDA 120

Query: 243 CKVFEEAK------------GY-----------------VCDHISYNVMMDGLASVGRVE 273
            KVF+ +             GY                 V D +S+N M+ G A  G  +
Sbjct: 121 HKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYK 180

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAI 330
           EAL  F++M+  ++RP E T V+V+SAC   R   +G QVH+     GF +   + NA I
Sbjct: 181 EALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALI 240

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            +YS CG+++ AC +F  L  KD+VSWNT+I  Y   NL + A+L + EM   G  P++ 
Sbjct: 241 DLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDV 300

Query: 391 TFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
           T  S+L   A  G I++   IH ++   +  +     +  +LI  YAK   I+ A+Q+F+
Sbjct: 301 TIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFN 360

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
           +M  +++ +WN +I GF ++G    G   FS +  + + PD+ T    LS+C+    L  
Sbjct: 361 SMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDL 420

Query: 506 GKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAY 563
           G+ I   + ++ ++  K+     MI L    G   +    +  M +E D + W +L+ A 
Sbjct: 421 GRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKAC 480

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            +HG  + A S  + +    +++P+      +LS
Sbjct: 481 RRHGNLELAESFARNLM---KVEPENPGSYVLLS 511



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 223/435 (51%), Gaps = 20/435 (4%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ Y+    L +CA  +    G Q+H + L+ G +   +V  +++
Sbjct: 50  ALKLYV-VMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLI 108

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L    +VF    + DV S+T  ++     G++  A E+FD++P +D+  +NA
Sbjct: 109 SMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNA 168

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF+EM K +VR D  +  +VLS C  +  +E GRQ+HS +   G
Sbjct: 169 MISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG 228

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDGLASVGRVEEALI 277
           F   + +VNALI +Y  CG V  AC +FE   G  C D +S+N ++ G   +   +EAL+
Sbjct: 229 FGSNLKIVNALIDLYSKCGQVETACGLFE---GLSCKDVVSWNTLIGGYTHMNLYKEALL 285

Query: 278 RFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHA---QAMKSGFEAYTSVSNAAIT 331
            F++ML +   P+++T VS++ AC       +G  +H    + +K    A  S+  + I 
Sbjct: 286 LFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNA-PSLRTSLID 344

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG I+ A  +F  +  K + SWN MI  +A      +    +  M+  GI PD+ T
Sbjct: 345 MYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDIT 404

Query: 392 FGSLLAS---SGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHN- 446
           F  LL++   SG +++   I   +  +  IT  ++    +I     +   K+A ++    
Sbjct: 405 FVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTM 464

Query: 447 -MSPRNIITWNTLIN 460
            M P  +I W +L+ 
Sbjct: 465 PMEPDGVI-WCSLLK 478



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 185/372 (49%), Gaps = 41/372 (11%)

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
           A  +FA +QE + + WNTM+  YA  +   SA+  Y+ M S+G+ P+ +TF  LL   A 
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-------- 450
           S   E  + IH  V   G   ++ V  +LIS YA+N R++ A+++F   S R        
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 451 -----------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                  ++++WN +I+G+   G   + L+ F E++ + +RPDE
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   LS+CA+  S+  G+Q+H ++  +   S + + NA+I LY+KCG ++ +  +F  
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD +SWN LI  Y      KEA+  F+ M   G   P+  T  ++L AC+H G +D 
Sbjct: 259 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE-SPNDVTIVSILPACAHLGAIDI 317

Query: 608 GTRI---FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           G  I    D  + D    P+    + ++D+  + G ++ A +V NS  +     +W A+ 
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 374

Query: 665 SACAAHGNLRLG 676
              A HG    G
Sbjct: 375 FGFAMHGRANAG 386


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 190/571 (33%), Positives = 305/571 (53%), Gaps = 14/571 (2%)

Query: 174 IGLFREMHK--LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVS-VVNALI 230
           +G FR  H   LD        A + S   AG L  GR LH+ +  SG +   + + N LI
Sbjct: 1   MGKFRGQHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLI 60

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           TMY +C +V  A ++F+       + +S+  ++ GL       +AL  F  M  A L P+
Sbjct: 61  TMYSHCADVPSAVRLFDAMPRP--NLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPT 118

Query: 291 ELTFVSVMSACLCPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           +    S   A       +   Q+H   ++ GF+A   V++    MYS  G + EAC +F 
Sbjct: 119 QFALSSAARAAAALAARHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFD 178

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIE--- 403
           ++ +KD V+W  MI  YA+     +A++A+ +M+  G +  D+    S+L++SG ++   
Sbjct: 179 QMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGW 238

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH-NMSPRNIITWNTLINGF 462
           +   IH+ V  +G    + V NAL   YAK   +  A ++   +    N+++  +LI+G+
Sbjct: 239 LARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGY 298

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           +      + L  F EL    + P+E+T S  +  CA  + L  G Q+H  V+K +LIS  
Sbjct: 299 IETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDS 358

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + + ++ +Y KCG +  S+++F  +     I+WNA I+  AQHG G+EA+  F  M   
Sbjct: 359 FVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSS 418

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G I+P+  TF ++L+ACSHAGLVD+G + F SM + +G  P  +H SC++D+ GRAG LD
Sbjct: 419 G-IRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLD 477

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EAE+ I    ++  +  W +L  AC   GN  LG I A  +++ E D   V+V LS IYA
Sbjct: 478 EAEKFIGEMPVKPNAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYA 537

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
           + G WE+   +R+L++   + K PG SW+ S
Sbjct: 538 SLGQWEDVKAVRKLMRDNRIKKLPGFSWVDS 568



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 145/570 (25%), Positives = 253/570 (44%), Gaps = 86/570 (15%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEI 118
           L+  L +C    +   G  LHA  + +G  A    +AN ++++Y +  D+ S  R+F   
Sbjct: 20  LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLF--- 76

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                                       D MP  +L  +  +++G T+N           
Sbjct: 77  ----------------------------DAMPRPNLVSWTTLVSGLTQN----------- 97

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLE-------------------FGRQLHSLVTKSGF 219
            MH     RD  + A+  S+C AGL+                     G QLH +  + GF
Sbjct: 98  SMH-----RD--ALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLGF 150

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              + V + L  MY   G +V+AC+VF++      D +++  M+DG A  G +E A+I F
Sbjct: 151 DAELFVASNLADMYSKSGLLVEACRVFDQMPQK--DAVAWTAMIDGYAKNGNLEAAVIAF 208

Query: 280 RDMLVASLRPSEL-TFVSVMSACLCPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSS 335
           RDM    L  ++     SV+SA    + G+    +H+  MKSGFE   +V NA   MY+ 
Sbjct: 209 RDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAK 268

Query: 336 CGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
              +D A  +    Q   ++VS  ++I  Y + +    A+L ++E++  G+ P+EFTF S
Sbjct: 269 AADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSS 328

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           ++   A    +E    +HA V    +I++  VS+ L+  Y K   I  + Q+F  +    
Sbjct: 329 MIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHT 388

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
            I WN  IN    +G   + ++ F  +  S +RP+  T    L++C+    +  G + + 
Sbjct: 389 DIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLK-YF 447

Query: 512 YVLKNN--LISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGE 568
           Y +K++  +  K    + +I +Y + G LD + + +  M ++ +   W +L+ A    G 
Sbjct: 448 YSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLGACRMRGN 507

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
            KE      A  ++ +++PD       LS 
Sbjct: 508 -KELGEI--AADNMMKLEPDNTGVHVSLSG 534



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 227/479 (47%), Gaps = 47/479 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ L+++  ++DAL  F  +  +  L P  ++LS+   A A L     G QLH   +R G
Sbjct: 91  VSGLTQNSMHRDALAAFSSMCRA-GLVPTQFALSSAARAAAALAARHAGAQLHCVGVRLG 149

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             A   VA+ +  +Y                               +K G +  AC VFD
Sbjct: 150 FDAELFVASNLADMY-------------------------------SKSGLLVEACRVFD 178

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLE- 205
           +MP +D   + AMI G  +NG  +  +  FR+M +   V  D +   SVLS    GL + 
Sbjct: 179 QMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSA-SGGLKDG 237

Query: 206 -FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
              R +HS V KSGF   V+V NAL  MY    ++ +A +V +  +G + + +S   ++D
Sbjct: 238 WLARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSL-NVVSATSLID 296

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
           G      +E+AL+ F ++    + P+E TF S++  C    +   G Q+HA+ +K+   +
Sbjct: 297 GYIETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLIS 356

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
            + VS+  + MY  CG I  +  +F  ++    ++WN  I+  AQ   GR AI A+  M 
Sbjct: 357 DSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMT 416

Query: 382 SVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           S GIRP+  TF SLL +   +G + E ++  ++    +GI    +  + +I  Y +  R+
Sbjct: 417 SSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRL 476

Query: 438 KQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +A +    M  + N   W +L+    + G   + L   +   M +L PD   + V+LS
Sbjct: 477 DEAEKFIGEMPVKPNAYGWCSLLGACRMRG--NKELGEIAADNMMKLEPDNTGVHVSLS 533


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 213/724 (29%), Positives = 356/724 (49%), Gaps = 67/724 (9%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G    A+ LF ++    +++P+ ++L   + AC+ L N A G ++H+       +    +
Sbjct: 123 GRPDKAMELFDRM----EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVL 178

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP---D 151
            N ++S+Y     L+  K                               + FD++P    
Sbjct: 179 GNALISMYSKCGSLIDAK-------------------------------QAFDRLPRASK 207

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN-YSFASVLSVC-DAGLL--EFG 207
           RD+  +NAMI+    NG     + LFR+M +      N  +F SVL  C +AGLL  E  
Sbjct: 208 RDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDV 267

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF-----EEAKGYVCDHISYNVM 262
           R +H  +  +G      V  AL+  Y   G++ DA +VF     EE    +   ++ + M
Sbjct: 268 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSL---VTCSAM 324

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGF 319
           +      G  +E+L  F  M +   +PS +T VSV++AC   +VG     V  QAM+   
Sbjct: 325 ISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVS 384

Query: 320 EAYTSV-SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
               +V     +T Y+    +  A   F  +Q  D+VSWN M + Y Q +  R A++ + 
Sbjct: 385 ATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFE 444

Query: 379 EMQSVGIRPDEFTF-GSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYA 432
            M   G+RP   TF  +L A + +         + I + +   G+  +  V+NA ++ YA
Sbjct: 445 RMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYA 504

Query: 433 KNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL-RPDEYT 489
           K   +  A  +F  +SP  R+ ITWN+++  +  +G   +  + F  +   +L +P++ T
Sbjct: 505 KCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVT 564

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
               L +    +S+  G++IH  V+ N   S   + NA++ +YAKCG LD +  +F+   
Sbjct: 565 FVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSS 624

Query: 550 --EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
             ++D I+W +LI+ YAQ+G+ + A+  F  MQ  G ++P+  TF + L+AC+H G ++ 
Sbjct: 625 SNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQG-VRPNHVTFISALTACNHGGKLEQ 683

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G  +   M  D+G +PA  H SC++DLLGR G LDEAE+++     QA    W AL  AC
Sbjct: 684 GCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDAC 742

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
                L  G   A  +++ + +  S Y++L+++YAAAG W EAA IR+ +   G+   PG
Sbjct: 743 KNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPG 802

Query: 728 CSWI 731
           CS +
Sbjct: 803 CSAV 806



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 165/637 (25%), Positives = 295/637 (46%), Gaps = 69/637 (10%)

Query: 64  LAACANLRNAAFGNQLHAYAL--RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           L AC  LR    G +LHA+ L  R  L  +  +A+ ++ ++    +L             
Sbjct: 50  LQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA---------- 99

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN--AMITGCTENGYEDIGIGLFRE 179
                                    + + DR   VY+  AMI    E+G  D  + LF  
Sbjct: 100 -------------------------EALADRFASVYSCTAMIRAWMEHGRPDKAMELFDR 134

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M   +VR + ++  ++++ C   G L  GR++HS ++   F     + NALI+MY  CG+
Sbjct: 135 M---EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGS 191

Query: 239 VVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVS 296
           ++DA + F+   +    D +++N M+      G   EAL  FRDM    +  P+ +TFVS
Sbjct: 192 LIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVS 251

Query: 297 VMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+ +C     L       +H + + +G E    V  A +  Y   G +D+A  +F R  +
Sbjct: 252 VLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGD 311

Query: 352 KD----IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
           ++    +V+ + MIS   Q    + ++  +  M   G +P   T  S+L +   ++ V  
Sbjct: 312 EEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQ-VGS 370

Query: 408 IHAFVF------INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
             AFV       ++    N+ +   L++ YA++  + +A   F  +   ++++WN +   
Sbjct: 371 ATAFVLEQAMEVVSATRDNV-LGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAA 429

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI---SSLRHGKQIHGYVLKNNL 518
           +L +    + L  F  +L+  +RP   T   AL++CA     ++   GK+I   + +  L
Sbjct: 430 YLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL 489

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCF 576
               ++ NA + +YAKCG L  +  VF  +    +D I+WN++++AY  HG GKEA   F
Sbjct: 490 EGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELF 549

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           +AM+    +KP++ TF AVL A +    +  G  I   +V++ GF       + +L++  
Sbjct: 550 QAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYA 608

Query: 637 RAGYLDEAERVIN-SQHIQARSDNWWALFSACAAHGN 672
           + G LD+A+ + + S   Q     W +L +  A +G 
Sbjct: 609 KCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQ 645



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 224/483 (46%), Gaps = 57/483 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  Q++L LF  ++     KP   +L + L AC+ L+  +      A+ L   ++   
Sbjct: 330 QNGWPQESLRLFFAMNL-EGTKPSGVTLVSVLNACSMLQVGS----ATAFVLEQAMEVVS 384

Query: 93  H-----VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 +  T+L+ Y  + DL   +  F  IQ+PDV SW                     
Sbjct: 385 ATRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSW--------------------- 423

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-- 205
                     NAM     ++      + LF  M    VR    +F + L+ C A   +  
Sbjct: 424 ----------NAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQTA 473

Query: 206 --FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G+++ SL+ ++G     +V NA + MY  CG++ DA  VFE       D I++N M+
Sbjct: 474 SAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNSML 533

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
                 G  +EA   F+ M    L +P+++TFV+V+ A         G ++HA+ + +GF
Sbjct: 534 AAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGF 593

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           E+ T + NA + MY+ CG +D+A  IF +    ++D+++W ++I+ YAQ      A+  +
Sbjct: 594 ESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLF 653

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
             MQ  G+RP+  TF S L +    G +E   E++      +GI+   +  + ++    +
Sbjct: 654 WTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGR 713

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R+ +A ++    S  ++ITW  L++    N   ++  +  +E +M +L P+  +  + 
Sbjct: 714 CGRLDEAEKLLERTSQADVITWMALLDA-CKNSKELERGERCAERIM-QLDPEVASSYIV 771

Query: 494 LSS 496
           L+S
Sbjct: 772 LAS 774



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 165/332 (49%), Gaps = 26/332 (7%)

Query: 391 TFGSLLASSGFIEMV---EMIHAFVFINGIITNIQ--VSNALISAYAKNERIKQAYQIFH 445
           T+G LL + G +  +   + +HA +    I  +    +++ LI  +AK   + +A  +  
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
             +  ++ +   +I  ++ +G P + ++ F  +   E+RP+ + L   +++C+ + +L  
Sbjct: 105 RFA--SVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLAA 159

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI---EKDTISWNALISA 562
           G++IH  +   +      LGNA+I++Y+KCG L  + + F+ +    ++D ++WNA+ISA
Sbjct: 160 GRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISA 219

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD-DGTRIFDSMVNDYGF 621
           + ++G  +EA+  F+ M   G   P+  TF +VL +C  AGL+  +  R     +   G 
Sbjct: 220 FLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGI 279

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW---WALFSACAAHG----NLR 674
                  + ++D  G+ G LD+A  V   +  +  S +     A+ SAC  +G    +LR
Sbjct: 280 EREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLR 339

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           L        +  E  KPS   L+S + A + L
Sbjct: 340 L-----FFAMNLEGTKPSGVTLVSVLNACSML 366



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 51/260 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA     G  ++A  LF  + +   +KP+  +    L A  +  + A G ++HA  +
Sbjct: 530 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 589

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVF--SEIQNPDVYSWTTFLSACTKMGHVDYA 142
             G ++   + N +L++Y     L   + +F  S     DV +WT+              
Sbjct: 590 SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTS-------------- 635

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-A 201
                            +I G  + G  +  + LF  M +  VR ++ +F S L+ C+  
Sbjct: 636 -----------------LIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHG 678

Query: 202 GLLEFGRQL-------HSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           G LE G +L       H ++  S  FSC+V ++         CG + +A K+ E  +   
Sbjct: 679 GKLEQGCELLSGMTPDHGILPASKHFSCIVDLLG-------RCGRLDEAEKLLE--RTSQ 729

Query: 254 CDHISYNVMMDGLASVGRVE 273
            D I++  ++D   +   +E
Sbjct: 730 ADVITWMALLDACKNSKELE 749


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 170/477 (35%), Positives = 269/477 (56%), Gaps = 8/477 (1%)

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRVGYQVHAQAMKS 317
           N ++ G  +     +A++ ++ M++  L P   TF S+  +C  LC   G Q+H  + K 
Sbjct: 109 NSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE--GKQLHCHSTKL 166

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF +   + N  + MYS+CG +  A  +F ++  K +VSW TMI  YAQ +L   AI  +
Sbjct: 167 GFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLF 226

Query: 378 LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             M+   ++P+E T  ++L   A S  +E  + +H ++   GI  +  +++AL+  Y K 
Sbjct: 227 RRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC 286

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
                A  +F+ M  +N+  WN +ING + +    + L  F+E+ +S ++ D+ T++  L
Sbjct: 287 GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLL 346

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            +C  + +L  GK +H Y+ K  +   ++LG A++ +YAKCG ++ ++RVF  M EKD +
Sbjct: 347 IACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVM 406

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           +W ALI   A  G+G +A+  F  MQ +  +KPD  TF  VL+ACSHAGLV++G   F+S
Sbjct: 407 TWTALIVGLAMCGQGLKALELFHEMQ-MSEVKPDAITFVGVLAACSHAGLVNEGIAYFNS 465

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M N YG  P+ +H  CM+D+LGRAG + EAE +I +  +         L SAC  HGNL 
Sbjct: 466 MPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLV 525

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +    A  L+E +      YVLLSNIY++   WE A  +REL+    + K PGCS I
Sbjct: 526 VAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAI 582



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 237/486 (48%), Gaps = 17/486 (3%)

Query: 122 DVYSWTTFLSACT--KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           D +S +  ++ C     G + YA  VF+++P+      N++I G T        I  ++ 
Sbjct: 71  DPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQL 130

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           M    +  D ++F S+   C  G+L  G+QLH   TK GF+    + N L+ MY NCG +
Sbjct: 131 MMLQGLDPDRFTFPSLFKSC--GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCL 188

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
           V A KVF++        +S+  M+   A      EA+  FR M +AS++P+E+T V+V++
Sbjct: 189 VSARKVFDKMVNKSV--VSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLT 246

Query: 300 ACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC   R      QVH    ++G   +T +++A + +Y  CG    A  +F ++ EK++  
Sbjct: 247 ACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFC 306

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVF 413
           WN MI+ + + +    A+  + EMQ  G++ D+ T  SLL +    G +E+ + +H ++ 
Sbjct: 307 WNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIE 366

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              I  ++ +  AL+  YAK   I+ A ++F  M  ++++TW  LI G  + G  ++ L+
Sbjct: 367 KEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALE 426

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLY 532
            F E+ MSE++PD  T    L++C+    +  G    +    K  +   +     M+ + 
Sbjct: 427 LFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDML 486

Query: 533 AKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
            + G + +    + NM +  D      L+SA   HG     V   +A Q +  + P    
Sbjct: 487 GRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHG---NLVVAERAAQQLIELDPKNGG 543

Query: 592 FTAVLS 597
              +LS
Sbjct: 544 TYVLLS 549



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 183/367 (49%), Gaps = 7/367 (1%)

Query: 309 QVHAQAMKSGF--EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           Q+HAQ +++    + +++    A       G +  A ++F ++      + N++I  Y  
Sbjct: 58  QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
           +NL R AIL Y  M   G+ PD FTF SL  S G +   + +H      G  ++  + N 
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNT 177

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ Y+    +  A ++F  M  +++++W T+I  +     P + ++ F  + ++ ++P+
Sbjct: 178 LMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPN 237

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E TL   L++CAR   L   KQ+H Y+ +  +     L +A++ +Y KCG    +  +FN
Sbjct: 238 EITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFN 297

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M EK+   WN +I+ + +  + +EA+S F  MQ  G +K D+ T  ++L AC+H G ++
Sbjct: 298 KMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG-VKGDKVTMASLLIACTHLGALE 356

Query: 607 DGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
            G  +   +  +   I  +  L + ++D+  + G ++ A RV   +  +     W AL  
Sbjct: 357 LGKWLHVYIEKEK--IEVDVALGTALVDMYAKCGSIESAMRVFQ-EMPEKDVMTWTALIV 413

Query: 666 ACAAHGN 672
             A  G 
Sbjct: 414 GLAMCGQ 420



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 190/416 (45%), Gaps = 48/416 (11%)

Query: 43  LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY 102
           LF Q+     L PD ++  +   +C  L     G QLH ++ + G  +  ++ NT++++Y
Sbjct: 126 LFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYIQNTLMNMY 182

Query: 103 KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMIT 162
            N   LVS ++VF ++ N  V SW T + A        YA          DLP       
Sbjct: 183 SNCGCLVSARKVFDKMVNKSVVSWATMIGA--------YA--------QWDLP------- 219

Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSC 221
                 +E   I LFR M    V+ +  +  +VL+ C     LE  +Q+H  + ++G   
Sbjct: 220 ------HE--AIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGF 271

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              + +AL+ +Y  CG    A  +F +   K   C    +N+M++G       EEAL  F
Sbjct: 272 HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFC----WNIMINGHVEDSDYEEALSLF 327

Query: 280 RDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
            +M ++ ++  ++T  S++ AC       +G  +H    K   E   ++  A + MY+ C
Sbjct: 328 NEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC 387

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G I+ A  +F  + EKD+++W  +I   A    G  A+  + EMQ   ++PD  TF  +L
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVL 447

Query: 397 AS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           A+   +G + E +   ++     GI  +I+    ++    +  RI +A  +  NM 
Sbjct: 448 AACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMP 503



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 135/291 (46%), Gaps = 43/291 (14%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
            +A+ LF ++  +  +KP+  +L   L ACA  R+     Q+H Y    G+  +  + + 
Sbjct: 220 HEAIKLFRRMEIA-SVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++ +Y                                K G    A ++F+KMP+++L  +
Sbjct: 279 LMDVY-------------------------------CKCGCYPLARDLFNKMPEKNLFCW 307

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTK 216
           N MI G  E+   +  + LF EM    V+ D  + AS+L  C   G LE G+ LH  + K
Sbjct: 308 NIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK 367

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
                 V++  AL+ MY  CG++  A +VF+E      D +++  ++ GLA  G+  +AL
Sbjct: 368 EKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK--DVMTWTALIVGLAMCGQGLKAL 425

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
             F +M ++ ++P  +TFV V++AC         HA  +  G   + S+ N
Sbjct: 426 ELFHEMQMSEVKPDAITFVGVLAAC--------SHAGLVNEGIAYFNSMPN 468



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 107/283 (37%), Gaps = 73/283 (25%)

Query: 25  NISLANLSRSGH-----YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           N+   N+  +GH     Y++AL LF ++  S  +K D  ++++ L AC +L     G  L
Sbjct: 303 NLFCWNIMINGHVEDSDYEEALSLFNEMQLS-GVKGDKVTMASLLIACTHLGALELGKWL 361

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H Y  +  ++    +   ++ +Y     + S  RVF E+   DV +WT            
Sbjct: 362 HVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWT------------ 409

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                              A+I G    G     + LF EM   +V+ D  +F  VL+ C
Sbjct: 410 -------------------ALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 450

Query: 200 D-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             AGL+  G               ++  N++   Y                 G       
Sbjct: 451 SHAGLVNEG---------------IAYFNSMPNKY-----------------GIQPSIEH 478

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           Y  M+D L   GR+ EA    ++M +A   P     V ++SAC
Sbjct: 479 YGCMVDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGLLSAC 518


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 216/729 (29%), Positives = 364/729 (49%), Gaps = 53/729 (7%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           R +A ++G+   +   +L++  S AN    G +Q+ +  + +I  +     D+      L
Sbjct: 2   RFSAIVSGSKLPN--WILRIKESSAN----GKWQEVVSHYHEIKKAGIQTVDVSVFPPIL 55

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            A + L +   G  LHA  ++ G  ++  + N+I+  Y                      
Sbjct: 56  KAWSFLSHR-HGKSLHACLIKQGFDSFTSIGNSIMGFY---------------------- 92

Query: 125 SWTTFLSACTKMGHVDYACEVFDKM-PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                     + G  D A +VF+ M   RD   +N +I G  +NG    G+  F      
Sbjct: 93  ---------IRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVA 143

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               +  +   V+  C   G    G  LH  + KSGF  + SV N+L++MY +  ++  A
Sbjct: 144 GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECA 202

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC 301
            ++F+E   +  D I+++VM+ G       +  L  FR M LV  + P  +  VSV+ AC
Sbjct: 203 RELFDEM--HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKAC 260

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              R    G  VH   +  GF+    V N+ I MYS C     A  +F  + +++ VSWN
Sbjct: 261 ASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWN 320

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFIN 415
           +M+S +        A      M+   +  DE T  ++L    +       + IH  +   
Sbjct: 321 SMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRR 380

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G   N  V +ALI AYAK   I+ A+++F  M  R++++W+T+I+GF   G P + +  +
Sbjct: 381 GSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVY 440

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            E+    ++P+  T+   L +C+  + L+  K  HG  ++    S++++G A++ +Y+KC
Sbjct: 441 QEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKC 500

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  S R F+ +  K+ ++W+A+I+AY  +G   EA++ F  M+  G +KP+  T  +V
Sbjct: 501 GEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG-LKPNPVTTLSV 559

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHI 653
           L+ACSH GLV++G  +F SMV + G  P  +H SCM+D+LGRAG LD A  VI +   ++
Sbjct: 560 LAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPHNL 619

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W +L SAC ++G   LG+     +LE E    + Y++ S++YAA GLW++AA I
Sbjct: 620 KNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARI 679

Query: 714 RELLKRTGV 722
           R L K  GV
Sbjct: 680 RVLAKEKGV 688


>gi|77553408|gb|ABA96204.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 887

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 215/714 (30%), Positives = 341/714 (47%), Gaps = 55/714 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL-----RNAAFGNQLHAYALRA 86
           +R+G        FV +  S    P+ +SL+T L AC ++             LH  A+RA
Sbjct: 64  TRNGAPHLGFRFFVSMIRS-GFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRA 122

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           GL + P V +++L +Y     + + +R F+ I+N                          
Sbjct: 123 GLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRN-------------------------- 156

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
                +DL  +NAM+ G   NG+    I     MH   +  D Y++ S +  C  +    
Sbjct: 157 -----KDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWG 211

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GRQLH LV  S      SV+N+L+ MYF       A  VF + +    D +S+N M  G
Sbjct: 212 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQK--DTVSWNTMFSG 269

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAMKSGFEAY 322
            A     +       DM     +P+E+TF   + +  A     +G Q+ A A + G+   
Sbjct: 270 FAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDN 329

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+NA I M   CG +D A   F  L  ++IV+WN +I+ Y   +    A+  +  +  
Sbjct: 330 VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVC 389

Query: 383 VGIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKN-ER 436
           +G RPDEFT+ ++L  S F E       E IHA +   G  +   VS +LI A A     
Sbjct: 390 IGERPDEFTYSAVL--SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGS 447

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALS 495
           ++ + +I  +     +++W  +I+ FL +G   + +  F+     S  +PDE+ L+  L+
Sbjct: 448 VQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLN 507

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDT 553
           +CA  + +RH + IH  VLK    +   + +A++  YAKCG++  +   F  +     D 
Sbjct: 508 ACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDA 567

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           I +N +++AYA HG   EA++ ++ M    ++ P  ATF A+LSACSH GLV+ G   F 
Sbjct: 568 IMYNTMLTAYANHGLIHEALNLYEEMTK-AKLNPTPATFVAILSACSHLGLVEQGKLAFS 626

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +M++ YG  PA  + +C++DLL R G LDEA+ VI++   Q     W +L + C  HGN 
Sbjct: 627 TMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNK 686

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           +LG + A  +L         YV LSN+YA  G W+ A   R  + +  + K  G
Sbjct: 687 QLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNNLQKVHG 740



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 253/527 (48%), Gaps = 22/527 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G +D A +VFD+MP R+L  + AM++  T NG   +G   F  M +     + +S A+
Sbjct: 34  RRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLAT 93

Query: 195 VLSVC------DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +L+ C       +  L     LH +  ++G      V ++L+ MY   G +  A + F  
Sbjct: 94  MLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAH 153

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
            +    D   +N M++G  S G    A+     M  + L P   T++S + AC       
Sbjct: 154 IRNK--DLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWG 211

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+H   + S  E+ TSV N+ + MY    + + A  +F ++++KD VSWNTM S +A
Sbjct: 212 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFA 271

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
                ++     ++M   G +P+E TF  LL  SG  E   +   I A  + +G   N+ 
Sbjct: 272 HDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL 331

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+NA+I+   +   + +AY  F +++ RNI+TWN +I G+ L       ++ F  L+   
Sbjct: 332 VANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIG 391

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-GDLDCS 541
            RPDE+T S  LS+       R  +QIH  +LK    S   +  ++I   A   G +  S
Sbjct: 392 ERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSS 451

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           L++     + + +SW A+ISA+ +HG   E +  F   +     KPD+     VL+AC++
Sbjct: 452 LKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACAN 511

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAE 645
           A L+    R   S+V   G     +H    S ++D   + G +  AE
Sbjct: 512 AALIRH-CRCIHSLVLKTGH---SNHFCVASAVVDAYAKCGEITSAE 554



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/511 (23%), Positives = 231/511 (45%), Gaps = 21/511 (4%)

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L   Y   G +  A KVF+E      + +S+  M+      G        F  M+ +
Sbjct: 25  MNYLPIYYARRGLLDSALKVFDEMPHR--NLVSWTAMVSASTRNGAPHLGFRFFVSMIRS 82

Query: 286 SLRPSELTFVSVMSACLCP--------RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
              P+E +  ++++AC            +   +H  A+++G ++   V ++ + MY+  G
Sbjct: 83  GFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHG 142

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
           +I  A   FA ++ KD+  WN M+  Y     G  AI   L M   G+ PD +T+ S + 
Sbjct: 143 RIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVK 202

Query: 398 S---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           +   S    +   +H  V  + + +N  V N+L+  Y +  + + A  +F  +  ++ ++
Sbjct: 203 ACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVS 262

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+ +GF  +        +  ++  +  +P+E T SV L       +   G QI     
Sbjct: 263 WNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAY 322

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           ++     + + NA+I +  +CG LD +   F  +  ++ ++WN +I+ Y      ++A+ 
Sbjct: 323 RHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMR 382

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F+++  +G  +PD+ T++AVLSA   A    D  +I  +++   GF   +   + ++  
Sbjct: 383 LFRSLVCIGE-RPDEFTYSAVLSAFQEAHGARDHEQI-HAIILKQGFASCQFVSTSLIKA 440

Query: 635 LGRA-GYLDEAERVI-NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
              A G +  + ++I +S  ++  S  W A+ SA   HG       +  L      +KP 
Sbjct: 441 NAAAFGSVQSSLKIIEDSGKMELVS--WGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPD 498

Query: 693 VYVLLS--NIYAAAGLWEEAANIRELLKRTG 721
            ++L +  N  A A L      I  L+ +TG
Sbjct: 499 EFILATVLNACANAALIRHCRCIHSLVLKTG 529



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 141/601 (23%), Positives = 253/601 (42%), Gaps = 60/601 (9%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI A     ++   + L   N  L     +G    A+   + +H S  L PD Y+  + +
Sbjct: 143 RIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHS-GLAPDRYTYISAV 201

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            AC+       G QLH   + + L++   V N+++ +Y  AR   +   VF +I+  D  
Sbjct: 202 KACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTV 261

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SW                               N M +G   +  +    G   +M +  
Sbjct: 262 SW-------------------------------NTMFSGFAHDEDDKAVFGYLIDMSRTG 290

Query: 185 VRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            + +  +F+ +L +  A      G Q+ +L  + G++  V V NA+I M F CG      
Sbjct: 291 FKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCG------ 344

Query: 244 KVFEEAKGYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
            + + A G+ C     + +++N ++ G       E+A+  FR ++    RP E T+ +V+
Sbjct: 345 -LLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVL 403

Query: 299 SA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDI 354
           SA       R   Q+HA  +K GF +   VS + I   ++  G +  +  I     + ++
Sbjct: 404 SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMEL 463

Query: 355 VSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
           VSW  +IS + +  L    I  + L       +PDEF   ++L   A++  I     IH+
Sbjct: 464 VSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHS 523

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFP 468
            V   G   +  V++A++ AYAK   I  A   F  +S    + I +NT++  +  +G  
Sbjct: 524 LVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLI 583

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA- 527
            + L  + E+  ++L P   T    LS+C+ +  +  GK     +L    +       A 
Sbjct: 584 HEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYAC 643

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ L A+ G LD +  V + M  +     W +L++    HG  +  V    A + + R+ 
Sbjct: 644 LVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGV---LAAEQILRMA 700

Query: 587 P 587
           P
Sbjct: 701 P 701



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 14/339 (4%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G  A+T   N     Y+  G +D A  +F  +  +++VSW  M+S   +         
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 376 AYLEMQSVGIRPDEFTFGSLLA--------SSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            ++ M   G  P+EF+  ++L         SS  + +   +H      G+ +N  V ++L
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 134

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK+ RI  A + F ++  +++  WN ++ G++ NGF    +     +  S L PD 
Sbjct: 135 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 194

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           YT   A+ +C+  +    G+Q+H  V+ + L S  S+ N+++ +Y +    + +  VF  
Sbjct: 195 YTYISAVKACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 254

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACSHAGLV 605
           + +KDT+SWN + S +A H E  +AV  F  + D+ R   KP++ TF+ +L         
Sbjct: 255 IRQKDTVSWNTMFSGFA-HDEDDKAV--FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 311

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             G +IF ++   +G+       + ++++L R G LD A
Sbjct: 312 SLGLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRA 349


>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 188/613 (30%), Positives = 315/613 (51%), Gaps = 13/613 (2%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y  T FL   +K+G V  A  +FD  P++D+  +NA+I+G T  G       LF EM +
Sbjct: 98  LYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRR 157

Query: 183 LDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +      +  S++  C    L   G+ +H L  K+G      V NAL++MY  C ++  
Sbjct: 158 REFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDG 217

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
              +F E        +S+N M+      G   EA++ F+ ML  S+  + +T VS++SA 
Sbjct: 218 VKLLFGEITEKSV--VSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSAN 275

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                G  +H  A K G     SV  + +  Y  CG I+ A +I+    +K++V+   +I
Sbjct: 276 --ANTGC-IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAII 332

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGII 418
           S YA++    S +  Y  +Q + ++ D      ++    + + + +    H +   +G+I
Sbjct: 333 SHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLI 392

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +  V+N  IS Y+K + I   + +F  M  + + +WN++I+     G  +  +  FS++
Sbjct: 393 IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQM 452

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
            +S   PD  TL+  LS+C +  +L  G+ +H Y+L+NNL  +  +G A++ +Y KCG +
Sbjct: 453 TLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRM 512

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D +  VF  M E    SWN+LIS Y   G    A+ C+  M + G IKP++ TF+ +L+A
Sbjct: 513 DFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKG-IKPNKITFSGILAA 571

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GLV++G + F  M   +G +P   H + M+ +LGRAG  +EA   I +      S 
Sbjct: 572 CTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSA 631

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W AL SAC  H  ++LG  +A  L          +VL+SN+YAA+  W + A IR++++
Sbjct: 632 VWGALLSACCIHQEVKLGESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMR 691

Query: 719 RTGVIKQPGCSWI 731
             G   + GCS +
Sbjct: 692 EMG---EDGCSGV 701



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 263/575 (45%), Gaps = 39/575 (6%)

Query: 176 LFREMHKLDVRRDNYSFASVL--------------SVCDAGLLEFGRQLHSLVTKSGFSC 221
           LFRE+ +  V+ ++ +F+ ++              S C         QL +   K GF  
Sbjct: 37  LFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQ 96

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            + V  A + +Y   G V  A ++F++      D +S+N ++ G    G   +A   F +
Sbjct: 97  FLYVSTAFLDLYSKLGFVKAAQRLFDDFPEK--DVVSWNALISGYTRCGNSHDAFKLFVE 154

Query: 282 MLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M      P + T VS+M +C   ++   G  +H   +K+G +  + V NA ++MY  C  
Sbjct: 155 MRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           +D   ++F  + EK +VSWNTMI  + Q  L   A+L + +M    +  +  T  S+L++
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +        IH +    G++ N+ V  +L+ +Y K   I+ A  I+ +   +N++    +
Sbjct: 275 NA---NTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAI 331

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+ +   G     ++ +S +   +++ D   +   +        +  G   HGY +K+ L
Sbjct: 332 ISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGL 391

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           I    + N  I++Y+K  ++D    +F  M +K   SWN++IS+ AQ G   +A++ F  
Sbjct: 392 IIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQ 451

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGT----RIFDSMVNDYGFIPAEDHLSCMLDL 634
           M   G   PD  T  ++LSAC   G +  G      I  + ++  GF+      + ++D+
Sbjct: 452 MTLSGY-GPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVG-----TALVDM 505

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
             + G +D AE V  S      + +W +L S     G      +    ++E+   KP+  
Sbjct: 506 YVKCGRMDFAENVFKSMKEPCLA-SWNSLISGYGLFGFHNHALLCYTEMMEK-GIKPN-K 562

Query: 695 VLLSNIYAA---AGLWEEAANIRELLKRT-GVIKQ 725
           +  S I AA    GL EE     +++K+  G++ +
Sbjct: 563 ITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPE 597



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 251/569 (44%), Gaps = 59/569 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +R G+  DA  LFV++    +  P   +L + + +C   +    G  +H   +
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRR-REFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGV 191

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +AGL     V N ++S+Y    DL  VK +F EI    V SW T                
Sbjct: 192 KAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNT---------------- 235

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                          MI    +NG     + +F++M +  V  ++ +  S+LS   + G 
Sbjct: 236 ---------------MIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC 280

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAKGYVC--DHISY 259
                 +H   TK G    VSVV +L+  Y  CG +  A  ++  +  K  V     IS+
Sbjct: 281 ------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISH 334

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
                 + SV R+  ++++  DM     +   +  V ++     P    +G   H   +K
Sbjct: 335 YAEKGDMGSVVRL-YSIVQHLDM-----KLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVK 388

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG      V+N  I+MYS    ID    +F  + +K + SWN++IS+ AQ      A+  
Sbjct: 389 SGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMAL 448

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   G  PD  T  SLL++   +G +   E++H ++  N +     V  AL+  Y K
Sbjct: 449 FSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVK 508

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R+  A  +F +M    + +WN+LI+G+ L GF    L  ++E++   ++P++ T S  
Sbjct: 509 CGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGI 568

Query: 494 LSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF--NMMIE 550
           L++C     +  G++    + K   ++ +     +M+ +  + G  + ++ VF  NM   
Sbjct: 569 LAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAI-VFIQNMETN 627

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAM 579
            D+  W AL+SA   H E K   S  K +
Sbjct: 628 PDSAVWGALLSACCIHQEVKLGESVAKKL 656



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 60/497 (12%)

Query: 276 LIRFRDMLVASLRPSELTFVSVMSA--------CLCPRV--------GYQVHAQAMKSGF 319
           L+ FR++L   ++P++ TF  ++ A           P            Q+    +K GF
Sbjct: 35  LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGF 94

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           + +  VS A + +YS  G +  A  +F    EKD+VSWN +IS Y +      A   ++E
Sbjct: 95  DQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVE 154

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+     P + T  SL+ S G  ++    + IH      G+  + QV NAL+S Y K   
Sbjct: 155 MRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +     +F  ++ +++++WNT+I  F  NG   + +  F ++L   +  +  T+   LS+
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A          IH Y  K  L+  +S+  +++  Y KCG ++ +  ++   ++K+ ++ 
Sbjct: 275 NANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVAL 328

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA-----GLVDDGTRI 611
            A+IS YA+ G+    V  +  +Q +  +K D      ++   ++      GL   G  +
Sbjct: 329 TAIISHYAEKGDMGSVVRLYSIVQHL-DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGV 387

Query: 612 FDSMVND----YGFIPAE---DHLSCMLDLLGR--AGYLDEAERVINSQHIQARSDNWWA 662
              ++ D     GFI      D++  +  L        L     VI+S     RS +  A
Sbjct: 388 KSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMA 447

Query: 663 LF-------------------SACAAHGNLRLGRIIAGLLLEREQD-KPSVYVLLSNIYA 702
           LF                   SAC  +GNL  G I+   +L    D +  V   L ++Y 
Sbjct: 448 LFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYV 507

Query: 703 AAGLWEEAANIRELLKR 719
             G  + A N+ + +K 
Sbjct: 508 KCGRMDFAENVFKSMKE 524



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 5/169 (2%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L   N  +++ +++G   DA+ LF Q+  S    PD  +L++ L+AC    N  FG 
Sbjct: 423 KKTLSSWNSVISSCAQAGRSIDAMALFSQMTLS-GYGPDSITLASLLSACCQNGNLHFGE 481

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            LH Y LR  L     V   ++ +Y     +   + VF  ++ P + SW + +S     G
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFG 541

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
             ++A   + +M ++ +      ++ ++  CT  G  + G   F+ M K
Sbjct: 542 FHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKK 590


>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
          Length = 820

 Score =  313 bits (801), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 219/785 (27%), Positives = 374/785 (47%), Gaps = 117/785 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+IY     L  C   R+   G Q+HA  L+ 
Sbjct: 31  VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG--EILQGCVYERDLCTGKQIHARILKN 88

Query: 87  G--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G       ++   ++  Y    DL   + +FS+++  +V+SW   +    +MG     CE
Sbjct: 89  GDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMG----LCE 144

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                           + G             F EM + ++  DN+   +V   C A   
Sbjct: 145 --------------GALMG-------------FVEMLENEIFPDNFVVPNVFKACGALQW 177

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+E      + +++N +M
Sbjct: 178 SRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPER--NVVAWNALM 235

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G    G  EEA+    DM    + P+ +T  + +SA         G Q HA A+ +G E
Sbjct: 236 VGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLE 295

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G I+ A MIF R+ EKD+V+WN +IS Y Q+ L   AI     M
Sbjct: 296 LDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLM 355

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAF-------------------- 411
           +   ++ D  T  +L++++   E +++          H+                     
Sbjct: 356 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSI 415

Query: 412 -----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS----PRNIITWN------ 456
                VF + +  ++ + N L++AYA++    +A ++F+ M     P N+ITWN      
Sbjct: 416 VDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRLFYEMQLESVPPNVITWNLIILSR 475

Query: 457 -----------------------------TLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                        T++NG + NG   + +    ++  S +RP+ 
Sbjct: 476 LRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNA 535

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++++VALS+ A ++S   G+ IHGY+++N    S  S+  +++ +YAKCGD++ + RVF 
Sbjct: 536 FSITVALSASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCGDINKAERVFE 595

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
             +  +   +NA+ISAYA  G   EAV+ +++++D+G  KPD  TFT++LSAC+HAG +D
Sbjct: 596 SKLSNELPLYNAMISAYALXGNVTEAVALYRSLEDMG-XKPDSITFTSLLSACNHAGDID 654

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
              R+F  MV+++G  P  +H   ++DL   A   D+A R++     +       +L ++
Sbjct: 655 QAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAKETDKALRLMEEMPYKPDXRMIQSLVAS 714

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C       L   ++  LLE E +    YV +SN YA  G W+E    RE++K  G+ K+P
Sbjct: 715 CNKQHKTELVDYLSRQLLETEPEXSGNYVTISNAYAVEGSWDEVVKTREMMKAKGLKKKP 774

Query: 727 GCSWI 731
           GCSWI
Sbjct: 775 GCSWI 779



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 148/573 (25%), Positives = 272/573 (47%), Gaps = 18/573 (3%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
           Y   ++   +NG     + L  EM   ++R     +  +L  C     L  G+Q+H+ + 
Sbjct: 27  YFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARIL 86

Query: 216 KSG--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           K+G  ++    +   L+  Y  C ++  A  +F  +K  V +  S+  ++     +G  E
Sbjct: 87  KNGDLYARNEYIETKLVIFYAKCDDLEIAEVLF--SKLRVRNVFSWAAIIGVKCRMGLCE 144

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            AL+ F +ML   + P      +V  AC      R G  VH   +K+G E    V+++  
Sbjct: 145 GALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLA 204

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY  CG +D+A  +F  + E+++V+WN ++  Y Q  +   AI    +M+  G+ P   
Sbjct: 205 DMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRV 264

Query: 391 TFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  + L++S  +  VE     HA   +NG+  +  +  +L++ Y K   I+ A  IF  M
Sbjct: 265 TVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRM 324

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             ++++TWN LI+G++  G     +     + + +L+ D  TL+  +S+ AR  +L+ GK
Sbjct: 325 FEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 384

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
           ++     +++L S + L +  + +YAKCG +  + +VF+  +EKD I WN L++AYA+ G
Sbjct: 385 EVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 444

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
              EA+  F  MQ +  + P+  T+  ++ +      V++   +F  M    G  P    
Sbjct: 445 HSGEALRLFYEMQ-LESVPPNVITWNLIILSRLRNAEVNEAKEMFLQM-QSSGITPNLIS 502

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL---RLGRIIAGLLL 684
            + M++ + + G  +EA   +          N +++  A +A  NL     GR I G ++
Sbjct: 503 WTTMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYII 562

Query: 685 E--REQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
              R     S+   L ++YA  G   +A  + E
Sbjct: 563 RNLRHSSSASIETSLVDMYAKCGDINKAERVFE 595



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/419 (21%), Positives = 176/419 (42%), Gaps = 69/419 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+++  Q+    KLK D  +L+T ++A A   N   G ++     
Sbjct: 333 NLLISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCF 391

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  L++   +A+T + +Y     +V  K+VF      D+  W T L+A  + GH   A  
Sbjct: 392 RHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALR 451

Query: 145 VFDKMPDRDLPV---------------------------------------YNAMITGCT 165
           +F +M    +P                                        +  M+ G  
Sbjct: 452 LFYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQMQSSGITPNLISWTTMMNGMV 511

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + +S    LS   +     FGR +H  + ++   S   
Sbjct: 512 QNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSA 571

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLASVGRVEEALIRFRDM 282
           S+  +L+ MY  CG++  A +VFE     + + +  YN M+   A  G V EA+  +R +
Sbjct: 572 SIETSLVDMYAKCGDINKAERVFESK---LSNELPLYNAMISAYALXGNVTEAVALYRSL 628

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS-VSNAAIT---------- 331
                +P  +TF S++SAC         HA  +      +T  VSN  +           
Sbjct: 629 EDMGXKPDSITFTSLLSAC--------NHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLV 680

Query: 332 -MYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +++S  + D+A  +   +  K D     +++++  +++  ++ ++ YL  Q +   P+
Sbjct: 681 DLFASAKETDKALRLMEEMPYKPDXRMIQSLVASCNKQH--KTELVDYLSRQLLETEPE 737


>gi|302774170|ref|XP_002970502.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
 gi|300162018|gb|EFJ28632.1| hypothetical protein SELMODRAFT_93612 [Selaginella moellendorffii]
          Length = 825

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 330/597 (55%), Gaps = 16/597 (2%)

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           S ++ P   +  T    C   G ++ A  +F  M +RD+  +NA+IT   ++G+ +  + 
Sbjct: 232 SAMETPLCNALITMYGRC---GRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVL 288

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           L++ M +   + D  +F ++L++ +    L   + +HS + +SG S  +++  AL+ MY 
Sbjct: 289 LYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYS 348

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            C ++ D   +FE+      + IS+NVM+   A  G   +A+     M +  ++P  +T 
Sbjct: 349 KCESLEDTRWLFEKMPQR--NVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTC 406

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V +++ C      ++G +VH    +   EA   + N+ + MY  CG++++A M+F  + +
Sbjct: 407 VGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQ 466

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMI 408
           ++++SW  M++ Y+++N    A+L +  +   G++P   TF   L +    E +    ++
Sbjct: 467 RNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLV 526

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGF 467
           H+    +G  T++ + +AL++ Y +   I+ A   F +   R N +TW+ +I  F+ +G 
Sbjct: 527 HSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQ 586

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGN 526
             +GLQH   +    L     T +  LS+C+ ++ LR GK+IH YV +    ++  ++ N
Sbjct: 587 DREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVTN 646

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           +++T+Y KCG LDC+  VF     +D I WNA+IS YAQHG+ ++AV  F  MQ  G + 
Sbjct: 647 SLVTMYGKCGSLDCAREVFETSRRQDIICWNAIISGYAQHGQTRDAVELFHRMQQEG-VT 705

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  TF  +LS CSH GL+D+G   + SMV + G  P +D+ +C++DLLGRAG L EAE 
Sbjct: 706 PDPVTFVCILSVCSHGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAEE 764

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
            I S   +   +   +L S+C +HG+++ GR  A  ++E +    S +V+LS+IY+A
Sbjct: 765 FIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 821



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 167/620 (26%), Positives = 309/620 (49%), Gaps = 43/620 (6%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L AC  L+      +LH+  +RA L     + N ++  Y     L               
Sbjct: 7   LQACPKLKALDIARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSL--------------- 51

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                           D A E F++M  +++  + A+I  C  +    + I L R+M   
Sbjct: 52  ----------------DDAWETFERMSYKNVYTWTAIIGVCAHHHCHSLAIILLRQMLLE 95

Query: 184 DVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V+ DN +  + L+ C+    L  G+ +H L+ +SG  C + + NAL++MY +CG+V DA
Sbjct: 96  GVKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDA 155

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +VF+       + I++  M+   A    +E+A   FR M +   + + +T+V+++ AC 
Sbjct: 156 KRVFDAMPAR--NVITWTAMIGAHAETS-LEQAFKVFRLMELEGFKSNFVTYVTLVQACS 212

Query: 303 CPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            P    VG  +H ++++S     T + NA ITMY  CG++++A  IF+ + E+DI++WN 
Sbjct: 213 KPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVERDIIAWNA 272

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM---VEMIHAFVFING 416
           +I+ Y Q      A+L Y  M   G +PD+ TF +LL  S   E    V+++H+ +  +G
Sbjct: 273 LITEYGQHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTDVKLVHSHIVESG 332

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  NI +  AL++ Y+K E ++    +F  M  RN+I+WN ++  +  +G   + +Q   
Sbjct: 333 VSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITE 392

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            + +  ++PD  T    L+ C   + L+ G+++HG++ +    + + L N+++ +Y +CG
Sbjct: 393 YMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCG 452

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +++ +  VF+ +++++ ISW A+++AY++      A+  F A+   G +KP   TF   L
Sbjct: 453 EVEQAEMVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSG-VKPTCITFLEAL 511

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
            AC  A  +  G R+  S     G        S ++ + GR G + +A+   +   ++  
Sbjct: 512 DACVGAEALGKG-RLVHSCAVQSGNDTDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKN 570

Query: 657 SDNWWALFSACAAHGNLRLG 676
              W A+ +A   HG  R G
Sbjct: 571 HVTWSAMIAAFVQHGQDREG 590



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 171/674 (25%), Positives = 314/674 (46%), Gaps = 59/674 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +KPD  +L   L +C   +    G  +H    ++G +    + N ++S+Y +   +   K
Sbjct: 97  VKPDNITLLAALTSCETSQALPAGKLIHGLIAQSGHQCDLILENALVSMYGSCGSVDDAK 156

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           RVF  +   +V +WT                               AMI    E   E  
Sbjct: 157 RVFDAMPARNVITWT-------------------------------AMIGAHAETSLEQ- 184

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
              +FR M     + +  ++ +++  C     LE G  LH    +S  +    + NALIT
Sbjct: 185 AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALIT 244

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG + DA  +F        D I++N ++      G VEEA++ ++ ML    +P +
Sbjct: 245 MYGRCGRLEDARAIFSSMVER--DIIAWNALITEYGQHGHVEEAVLLYQLMLQEGCKPDK 302

Query: 292 LTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +TFV++++    P        VH+  ++SG     ++  A + MYS C  +++   +F +
Sbjct: 303 VTFVALLTMSNGPEALTDVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEK 362

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           + +++++SWN M++ YA+  LGR A+     MQ  G++PD  T   LL     S  +++ 
Sbjct: 363 MPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLG 422

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H ++       ++ + N+L++ Y +   ++QA  +F  +  RN+I+W  ++  +   
Sbjct: 423 RKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGILQRNVISWTAMLTAYSRQ 482

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
                 L  F  + +S ++P   T   AL +C    +L  G+ +H   +++   + +SLG
Sbjct: 483 NRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALGKGRLVHSCAVQSGNDTDVSLG 542

Query: 526 NAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           +A++ +Y +CG +  +   F +  + K+ ++W+A+I+A+ QHG+ +E +   + MQ  G 
Sbjct: 543 SALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHGQDREGLQHLRFMQQQG- 601

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF-IPAEDHLSCMLDLLGRAGYLDE 643
           +    ATF + LSACS+   + +G RI  S V +  F   A    + ++ + G+ G LD 
Sbjct: 602 LDMSPATFASTLSACSNLADLREGKRIH-SYVRERRFDTEAATVTNSLVTMYGKCGSLDC 660

Query: 644 AERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDK-----PSVYVL 696
           A  V  +     R D   W A+ S  A HG  R     A  L  R Q +     P  +V 
Sbjct: 661 AREVFETSR---RQDIICWNAIISGYAQHGQTR----DAVELFHRMQQEGVTPDPVTFVC 713

Query: 697 LSNIYAAAGLWEEA 710
           + ++ +  GL +E 
Sbjct: 714 ILSVCSHGGLLDEG 727


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 189/615 (30%), Positives = 314/615 (51%), Gaps = 15/615 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRR 187
            + A  ++G    A  V D MP R+   +NA I G  ++G     +  +  M     V  
Sbjct: 81  LVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAA 140

Query: 188 DNYSFASVLSVCDA-GLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
           D +++  V+  C A G++E GR     + + V +   +  V V  AL+ M+  CG + +A
Sbjct: 141 DGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEA 200

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
             VFE       D  ++  M+ G    G   +A+  F  M         +   +V+ AC 
Sbjct: 201 RSVFESMLER--DLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACG 258

Query: 303 CP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                R G  +H  A++ G    T VSNA + MY  CG +  A  +F  +  KD+VSW+T
Sbjct: 259 RAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWST 318

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFING 416
           +I+ Y+Q      ++  + EM + G++P+  T  S+L S   +++    + IH F   NG
Sbjct: 319 LIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNG 378

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              +  + +A I  Y++   I++A  +   M  R+++ WN+++ G+ +NG     L  F 
Sbjct: 379 FDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFR 438

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            L     RPD  T+   L  C   S L  GK++H YV+++ + S  S+ NA+I +Y KC 
Sbjct: 439 ALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCC 498

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
            L+    +F ++ ++DT ++N LIS++ +HG   EA+  F  M+  G I PD+ TF A+L
Sbjct: 499 CLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDG-IAPDKVTFVALL 557

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           S+CSHAGL++ G   +D M+ DY   P ++H SC++DL  R+G LD+A + ++S   +A 
Sbjct: 558 SSCSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAE 617

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
            D    L  AC  H  + +  ++A  + E+    P  ++LLSNIYA AG+W     IR +
Sbjct: 618 IDVLGCLLGACRVHNRMDIAELVAKRIFEQNPSDPGYHILLSNIYANAGMWSHVTRIRTM 677

Query: 717 LKRTGVIKQPGCSWI 731
           ++   +  + G S I
Sbjct: 678 IENRSLKNKTGNSLI 692



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 239/524 (45%), Gaps = 39/524 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N ++  L  SG + +AL  +  +     +  D ++    + ACA     A G       +
Sbjct: 110 NAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACA-----ALGVVEQGRMV 164

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  ++A                       V   +  P V+     +    K G +  A  
Sbjct: 165 RENVEA----------------------DVVRGVVAPSVFVQCALVDMFAKCGCLGEARS 202

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           VF+ M +RDL  + AMI G    G     + LF  M       D+   A+V+  C  A  
Sbjct: 203 VFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKE 262

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G  LH    + G      V NAL+ MY  CG +  A +VF    G+  D +S++ ++
Sbjct: 263 LRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSI-GFK-DVVSWSTLI 320

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFE 320
            G +  G+   ++  F +M+ A L+P+  T  S+   +S     R G ++H  ++++GF+
Sbjct: 321 AGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFD 380

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               + +A I  YS  G I EA ++   + ++D+V WN+M++ YA      SA+ A+  +
Sbjct: 381 QSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRAL 440

Query: 381 QSVGIRPDEFTFGSLLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           Q VG RPD  T  S+L      S  I+  E+ HA+V  + + +   VSNALI  Y K   
Sbjct: 441 QKVGFRPDHVTVVSVLPVCNHHSRLIQGKEL-HAYVVRHYMSSVCSVSNALIDMYCKCCC 499

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +++  +IF  ++ R+  T+NTLI+ F  +G   + +  F  +    + PD+ T    LSS
Sbjct: 500 LEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSS 559

Query: 497 CARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLD 539
           C+    +  G   +  +L++ N+       + ++ LY++ G LD
Sbjct: 560 CSHAGLIEKGLHFYDIMLQDYNISPGKEHYSCVVDLYSRSGKLD 603



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 159/337 (47%), Gaps = 53/337 (15%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  S++G    +++LF ++ ++  LKP+  ++++ L + + ++    G ++H ++LR G
Sbjct: 320 IAGYSQNGKDHVSVNLFTEMVTA-GLKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNG 378

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + +  +  Y                               ++ G +  A  V +
Sbjct: 379 FDQSKFLGSAFIDFY-------------------------------SRQGSIREAEIVLE 407

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLE 205
            MP RDL ++N+M+ G   NG  D  +  FR + K+  R D+ +  SVL VC+  + L++
Sbjct: 408 LMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQ 467

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G++LH+ V +   S + SV NALI MY  C  +    ++F+       D  +YN ++  
Sbjct: 468 -GKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDR--DTATYNTLISS 524

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG--------YQVHAQA--M 315
               G  +EA++ F  M    + P ++TFV+++S+  C   G        Y +  Q   +
Sbjct: 525 FGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSS--CSHAGLIEKGLHFYDIMLQDYNI 582

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
             G E Y+ V    + +YS  GK+D+A    + LQ++
Sbjct: 583 SPGKEHYSCV----VDLYSRSGKLDDAWKFVSSLQDE 615



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 18/254 (7%)

Query: 408 IHAFVFINGIITNIQVSNA-LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           +HA + + G      V  A L+ AYA+     +A  +   M  RN   WN  I G + +G
Sbjct: 61  LHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSG 120

Query: 467 FPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGK----QIHGYVLKNNLISK 521
              + L+ +  ++    +  D +T    + +CA +  +  G+     +   V++  +   
Sbjct: 121 QFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPS 180

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + +  A++ ++AKCG L  +  VF  M+E+D  +W A+I      G+  +A+S F  M+ 
Sbjct: 181 VFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRS 240

Query: 582 VGRIKPDQATFTAVLSACSHA-----GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
            G +  D      V+ AC  A     G+V  G  +   + +D     A      ++D+  
Sbjct: 241 EGFL-ADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNA------LVDMYC 293

Query: 637 RAGYLDEAERVINS 650
           + G L  A+RV  S
Sbjct: 294 KCGCLGMADRVFWS 307



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 7/166 (4%)

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNM 547
           +L + L SC    +L   +++H  +L      + + L   ++  YA+ G+   +L V + 
Sbjct: 44  SLLLRLRSC---PTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDG 100

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M  +++ +WNA I      G+  EA+  + AM   G +  D  T+  V+ AC+  G+V+ 
Sbjct: 101 MPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQ 160

Query: 608 GTRIFDSMVNDY--GFIPAEDHLSC-MLDLLGRAGYLDEAERVINS 650
           G  + +++  D   G +     + C ++D+  + G L EA  V  S
Sbjct: 161 GRMVRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFES 206



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 9/169 (5%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  L+  N  +A  + +G+   AL  F  +      +PD  ++ + L  C +      G 
Sbjct: 411 KRDLVIWNSMVAGYAVNGNTDSALCAFRALQKV-GFRPDHVTVVSVLPVCNHHSRLIQGK 469

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +LHAY +R  + +   V+N ++ +Y     L   K +F  + + D  ++ T +S+  K G
Sbjct: 470 ELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHG 529

Query: 138 HVDYACEVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           H D A  +FD M      PD+    + A+++ C+  G  + G+  +  M
Sbjct: 530 HEDEAIMLFDLMKRDGIAPDK--VTFVALLSSCSHAGLIEKGLHFYDIM 576


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 216/729 (29%), Positives = 364/729 (49%), Gaps = 53/729 (7%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           R +A ++G+   +   +L++  S AN    G +Q+ +  + +I  +     D+      L
Sbjct: 2   RFSAIVSGSKLPN--WILRIKESSAN----GKWQEVVSHYHEIKKAGIQTVDVSVFPPIL 55

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            A + L +   G  LHA  ++ G  ++  + N+I+  Y                      
Sbjct: 56  KAWSFLSHR-HGKSLHACLIKQGFDSFTSIGNSIMGFY---------------------- 92

Query: 125 SWTTFLSACTKMGHVDYACEVFDKM-PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                     + G  D A +VF+ M   RD   +N +I G  +NG    G+  F      
Sbjct: 93  ---------IRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVA 143

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               +  +   V+  C   G    G  LH  + KSGF  + SV N+L++MY +  ++  A
Sbjct: 144 GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVD-ADMECA 202

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC 301
            ++F+E   +  D I+++VM+ G       +  L  FR M LV  + P  +  VSV+ AC
Sbjct: 203 RELFDEM--HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSVLKAC 260

Query: 302 LCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              R    G  VH   +  GF+    V N+ I MYS C     A  +F  + +++ VSWN
Sbjct: 261 ASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNNVSWN 320

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFIN 415
           +M+S +        A      M+   +  DE T  ++L    +       + IH  +   
Sbjct: 321 SMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCVMIRR 380

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G   N  V +ALI AYAK   I+ A+++F  M  R++++W+T+I+GF   G P + +  +
Sbjct: 381 GSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVY 440

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            E+    ++P+  T+   L +C+  + L+  K  HG  ++    S++++G A++ +Y+KC
Sbjct: 441 QEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKC 500

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G++  S R F+ +  K+ ++W+A+I+AY  +G   EA++ F  M+  G +KP+  T  +V
Sbjct: 501 GEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKRHG-LKPNPVTTLSV 559

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHI 653
           L+ACSH GLV++G  +F SMV + G  P  +H SCM+D+LGRAG LD A  VI +   ++
Sbjct: 560 LAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGKLDTAIEVIKAMPDNL 619

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           +  +  W +L SAC ++G   LG+     +LE E    + Y++ S++YAA GLW++AA I
Sbjct: 620 KNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVASSMYAADGLWDDAARI 679

Query: 714 RELLKRTGV 722
           R L K  GV
Sbjct: 680 RVLAKEKGV 688


>gi|218186285|gb|EEC68712.1| hypothetical protein OsI_37194 [Oryza sativa Indica Group]
          Length = 787

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 214/716 (29%), Positives = 342/716 (47%), Gaps = 55/716 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL-----RNAAFGNQLHAYALRA 86
           +R+G        FV +  S    P+ ++L+T L AC ++             LH  A+RA
Sbjct: 105 TRNGAPHLGFRFFVSMIRS-GFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRA 163

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           GL + P V +++L +Y     + + +R F+ I+N                          
Sbjct: 164 GLDSNPFVGSSLLLMYAKHGRIAAAQRAFAHIRN-------------------------- 197

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
                +DL  +NAM+ G   NG+    I     MH   +  D Y++ S +  C  +   +
Sbjct: 198 -----KDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWD 252

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GRQLH LV  S      SV+N+L+ MYF       A  VF + +    D +S+N M  G
Sbjct: 253 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQK--DTVSWNTMFSG 310

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAY 322
            A     +       DM     +P+E+TF  ++    A     +G Q+ A A + G+   
Sbjct: 311 FAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDN 370

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+NA I M   CG +D A   F  L  ++IV+WN +I+ Y   +    A+  +  +  
Sbjct: 371 VLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVC 430

Query: 383 VGIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKN-ER 436
           +G RPDEFT+ ++L  S F E       E IHA +   G  +   VS +LI A A     
Sbjct: 431 IGERPDEFTYSAVL--SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGS 488

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALS 495
           ++ + +I  +     +++W  +I+ FL +G   + +  F+     S  +PDE+ L+  L+
Sbjct: 489 VQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLN 548

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDT 553
           +CA  + +RH + IH  VLK    +   + +A++  YAKCG++  +   F  +     D 
Sbjct: 549 ACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDA 608

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           I +N +++AYA HG   EA++ ++ M    ++ P  ATF A+LSACSH GLV+ G   F 
Sbjct: 609 IMYNTMLTAYANHGLIHEALNLYEEMTK-AKLNPTPATFVAILSACSHLGLVEQGKLAFS 667

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           +M++ YG  P   + +C++DLL R G LDEA+ VI++   Q     W +L + C  HGN 
Sbjct: 668 TMLSAYGMHPERANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNK 727

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           +LG + A  +L         YV LSN+YA  G W+ A   R  + +  + K  G S
Sbjct: 728 QLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRRMVQNKLQKVHGYS 783



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 254/527 (48%), Gaps = 22/527 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G +D A +VFD+MP R+L  + AM++  T NG   +G   F  M +     + ++ A+
Sbjct: 75  RRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFALAT 134

Query: 195 VLSVCDAGL------LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +L+ C + L      L     LH +  ++G      V ++L+ MY   G +  A + F  
Sbjct: 135 MLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAH 194

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
            +    D   +N M++G  S G    A+     M  + L P   T++S + AC       
Sbjct: 195 IRNK--DLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAVKACSISAQWD 252

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+H   + S  E+ TSV N+ + MY    + + A  +F ++++KD VSWNTM S +A
Sbjct: 253 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFA 312

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
                ++     ++M   G +P+E TF  LL  SG  E   +   I A  + +G   N+ 
Sbjct: 313 HDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVL 372

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+NA+I+   +   + +AY  F +++ RNI+TWN +I G+ L       ++ F  L+   
Sbjct: 373 VANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIG 432

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-GDLDCS 541
            RPDE+T S  LS+       R  +QIH  +LK    S   +  ++I   A   G +  S
Sbjct: 433 ERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSS 492

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           L++     + + +SW A+ISA+ +HG   E +  F   +     KPD+     VL+AC++
Sbjct: 493 LKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACAN 552

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAE 645
           A L+    R   S+V   G     +H    S ++D   + G +  AE
Sbjct: 553 AALIRH-CRCIHSLVLKTGH---SNHFCVASAVVDAYAKCGEITSAE 595



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/512 (23%), Positives = 233/512 (45%), Gaps = 23/512 (4%)

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+  Y   G +  A KVF+E      + +S+  M+      G        F  M+ +
Sbjct: 66  MNYLLIYYARRGLLDSALKVFDEMPHR--NLVSWTAMVSASTRNGAPHLGFRFFVSMIRS 123

Query: 286 SLRPSELTFVSVMSAC---------LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
              P+E    ++++AC           P +   +H  A+++G ++   V ++ + MY+  
Sbjct: 124 GFCPNEFALATMLTACHSMLAHSSNKLP-IALSLHGVAVRAGLDSNPFVGSSLLLMYAKH 182

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G+I  A   FA ++ KD+  WN M+  Y     G  AI   L M   G+ PD +T+ S +
Sbjct: 183 GRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDRYTYISAV 242

Query: 397 AS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
            +   S   ++   +H  V  + + +N  V N+L+  Y +  + + A  +F  +  ++ +
Sbjct: 243 KACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTV 302

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WNT+ +GF  +        +  ++  +  +P+E T SV L       +   G QI    
Sbjct: 303 SWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENASLGLQIFALA 362

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
            ++     + + NA+I +  +CG LD +   F  +  ++ ++WN +I+ Y      ++A+
Sbjct: 363 YRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAM 422

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F+++  +G  +PD+ T++AVLSA   A    D  +I  +++   GF   +   + ++ 
Sbjct: 423 RLFRSLVCIGE-RPDEFTYSAVLSAFQEAHGARDHEQI-HAIILKQGFASCQFVSTSLIK 480

Query: 634 LLGRA-GYLDEAERVI-NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
               A G +  + ++I +S  ++  S  W A+ SA   HG       +  L      +KP
Sbjct: 481 ANAAAFGSVQSSLKIIEDSGKMELVS--WGAIISAFLKHGLNDEVIFLFNLFRGDSTNKP 538

Query: 692 SVYVLLS--NIYAAAGLWEEAANIRELLKRTG 721
             ++L +  N  A A L      I  L+ +TG
Sbjct: 539 DEFILATVLNACANAALIRHCRCIHSLVLKTG 570



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 142/601 (23%), Positives = 254/601 (42%), Gaps = 60/601 (9%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI A     ++   + L   N  L     +G    A+   + +H S  L PD Y+  + +
Sbjct: 184 RIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHS-GLAPDRYTYISAV 242

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
            AC+       G QLH   + + L++   V N+++ +Y  AR   +   VF +I+  D  
Sbjct: 243 KACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTV 302

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SW                               N M +G   +  +    G   +M +  
Sbjct: 303 SW-------------------------------NTMFSGFAHDEDDKAVFGYLIDMSRTG 331

Query: 185 VRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
            + +  +F+ +L +  A      G Q+ +L  + G++  V V NA+I M F CG      
Sbjct: 332 FKPNEVTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCG------ 385

Query: 244 KVFEEAKGYVC-----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
            + + A G+ C     + +++N ++ G     R E+A+  FR ++    RP E T+ +V+
Sbjct: 386 -LLDRAYGFFCSLTFRNIVTWNEIIAGYGLFSRSEDAMRLFRSLVCIGERPDEFTYSAVL 444

Query: 299 SA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDI 354
           SA       R   Q+HA  +K GF +   VS + I   ++  G +  +  I     + ++
Sbjct: 445 SAFQEAHGARDHEQIHAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMEL 504

Query: 355 VSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
           VSW  +IS + +  L    I  + L       +PDEF   ++L   A++  I     IH+
Sbjct: 505 VSWGAIISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHS 564

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFP 468
            V   G   +  V++A++ AYAK   I  A   F  +S    + I +NT++  +  +G  
Sbjct: 565 LVLKTGHSNHFCVASAVVDAYAKCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLI 624

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA- 527
            + L  + E+  ++L P   T    LS+C+ +  +  GK     +L    +       A 
Sbjct: 625 HEALNLYEEMTKAKLNPTPATFVAILSACSHLGLVEQGKLAFSTMLSAYGMHPERANYAC 684

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++ L A+ G LD +  V + M  +     W +L++    HG  +  V    A + + R+ 
Sbjct: 685 LVDLLARKGLLDEAKGVIDAMPFQPWPAVWRSLVNGCRIHGNKQLGV---LAAEQILRMA 741

Query: 587 P 587
           P
Sbjct: 742 P 742



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 165/339 (48%), Gaps = 14/339 (4%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G  A+T   N  +  Y+  G +D A  +F  +  +++VSW  M+S   +         
Sbjct: 56  KLGTLAHTFNMNYLLIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 115

Query: 376 AYLEMQSVGIRPDEFTFGSLLA--------SSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            ++ M   G  P+EF   ++L         SS  + +   +H      G+ +N  V ++L
Sbjct: 116 FFVSMIRSGFCPNEFALATMLTACHSMLAHSSNKLPIALSLHGVAVRAGLDSNPFVGSSL 175

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK+ RI  A + F ++  +++  WN ++ G++ NGF    +     +  S L PD 
Sbjct: 176 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVSNGFGHHAISTVLVMHHSGLAPDR 235

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           YT   A+ +C+  +    G+Q+H  V+ + L S  S+ N+++ +Y +    + +  VF  
Sbjct: 236 YTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 295

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR--IKPDQATFTAVLSACSHAGLV 605
           + +KDT+SWN + S +A H E  +AV  F  + D+ R   KP++ TF+ +L         
Sbjct: 296 IRQKDTVSWNTMFSGFA-HDEDDKAV--FGYLIDMSRTGFKPNEVTFSVLLRLSGAKENA 352

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             G +IF ++   +G+       + ++++L R G LD A
Sbjct: 353 SLGLQIF-ALAYRHGYTDNVLVANAVINMLFRCGLLDRA 390


>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/613 (30%), Positives = 315/613 (51%), Gaps = 13/613 (2%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y  T FL   +K+G V  A  +FD  P++D+  +NA+I+G T  G       LF EM +
Sbjct: 98  LYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRR 157

Query: 183 LDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            +      +  S++  C    L   G+ +H L  K+G      V NAL++MY  C ++  
Sbjct: 158 REFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDG 217

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
              +F E        +S+N M+      G   EA++ F+ ML  S+  + +T VS++SA 
Sbjct: 218 VKLLFGEITEKSV--VSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSAN 275

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                G  +H  A K G     SV  + +  Y  CG I+ A +I+    +K++V+   +I
Sbjct: 276 --ANTGC-IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAII 332

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGII 418
           S YA++    S +  Y  +Q + ++ D      ++    + + + +    H +   +G+I
Sbjct: 333 SHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLI 392

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            +  V+N  IS Y+K + I   + +F  M  + + +WN++I+     G  +  +  FS++
Sbjct: 393 IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQM 452

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
            +S   PD  TL+  LS+C +  +L  G+ +H Y+L+NNL  +  +G A++ +Y KCG +
Sbjct: 453 TLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRM 512

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D +  VF  M E    SWN+LIS Y   G    A+ C+  M + G IKP++ TF+ +L+A
Sbjct: 513 DFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKG-IKPNKITFSGILAA 571

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+H GLV++G + F  M   +G +P   H + M+ +LGRAG  +EA   I +      S 
Sbjct: 572 CTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSA 631

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W AL SAC  H  ++LG  +A  L          +VL+SN+YAA+  W + A IR++++
Sbjct: 632 VWGALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMR 691

Query: 719 RTGVIKQPGCSWI 731
             G   + GCS +
Sbjct: 692 EMG---EDGCSGV 701



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 263/575 (45%), Gaps = 39/575 (6%)

Query: 176 LFREMHKLDVRRDNYSFASVL--------------SVCDAGLLEFGRQLHSLVTKSGFSC 221
           LFRE+ +  V+ ++ +F+ ++              S C         QL +   K GF  
Sbjct: 37  LFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGFDQ 96

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
            + V  A + +Y   G V  A ++F++      D +S+N ++ G    G   +A   F +
Sbjct: 97  FLYVSTAFLDLYSKLGFVKAAQRLFDDFPEK--DVVSWNALISGYTRCGNSHDAFKLFVE 154

Query: 282 MLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           M      P + T VS+M +C   ++   G  +H   +K+G +  + V NA ++MY  C  
Sbjct: 155 MRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           +D   ++F  + EK +VSWNTMI  + Q  L   A+L + +M    +  +  T  S+L++
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +        IH +    G++ N+ V  +L+ +Y K   I+ A  I+ +   +N++    +
Sbjct: 275 NA---NTGCIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAI 331

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+ +   G     ++ +S +   +++ D   +   +        +  G   HGY +K+ L
Sbjct: 332 ISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGL 391

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           I    + N  I++Y+K  ++D    +F  M +K   SWN++IS+ AQ G   +A++ F  
Sbjct: 392 IIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQ 451

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGT----RIFDSMVNDYGFIPAEDHLSCMLDL 634
           M   G   PD  T  ++LSAC   G +  G      I  + ++  GF+      + ++D+
Sbjct: 452 MTLSG-YGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVG-----TALVDM 505

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY 694
             + G +D AE V  S      + +W +L S     G      +    ++E+   KP+  
Sbjct: 506 YVKCGRMDFAENVFKSMKEPCLA-SWNSLISGYGLFGFHNHALLCYTEMMEK-GIKPN-K 562

Query: 695 VLLSNIYAA---AGLWEEAANIRELLKRT-GVIKQ 725
           +  S I AA    GL EE     +++K+  G++ +
Sbjct: 563 ITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVPE 597



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 251/569 (44%), Gaps = 59/569 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +R G+  DA  LFV++    +  P   +L + + +C   +    G  +H   +
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRR-REFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGV 191

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +AGL     V N ++S+Y    DL  VK +F EI    V SW T                
Sbjct: 192 KAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNT---------------- 235

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                          MI    +NG     + +F++M +  V  ++ +  S+LS   + G 
Sbjct: 236 ---------------MIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC 280

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAKGYVC--DHISY 259
                 +H   TK G    VSVV +L+  Y  CG +  A  ++  +  K  V     IS+
Sbjct: 281 ------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISH 334

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
                 + SV R+  ++++  DM     +   +  V ++     P    +G   H   +K
Sbjct: 335 YAEKGDMGSVVRL-YSIVQHLDM-----KLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVK 388

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG      V+N  I+MYS    ID    +F  + +K + SWN++IS+ AQ      A+  
Sbjct: 389 SGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMAL 448

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           + +M   G  PD  T  SLL++   +G +   E++H ++  N +     V  AL+  Y K
Sbjct: 449 FSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVK 508

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R+  A  +F +M    + +WN+LI+G+ L GF    L  ++E++   ++P++ T S  
Sbjct: 509 CGRMDFAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGI 568

Query: 494 LSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF--NMMIE 550
           L++C     +  G++    + K   ++ +     +M+ +  + G  + ++ VF  NM   
Sbjct: 569 LAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAI-VFIQNMETN 627

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAM 579
            D+  W AL+SA   H E K   S  K +
Sbjct: 628 PDSAVWGALLSACCIHQEVKLGESVAKKL 656



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 60/497 (12%)

Query: 276 LIRFRDMLVASLRPSELTFVSVMSA--------CLCPRV--------GYQVHAQAMKSGF 319
           L+ FR++L   ++P++ TF  ++ A           P            Q+    +K GF
Sbjct: 35  LLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIKWGF 94

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           + +  VS A + +YS  G +  A  +F    EKD+VSWN +IS Y +      A   ++E
Sbjct: 95  DQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVE 154

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+     P + T  SL+ S G  ++    + IH      G+  + QV NAL+S Y K   
Sbjct: 155 MRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCAD 214

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +     +F  ++ +++++WNT+I  F  NG   + +  F ++L   +  +  T+   LS+
Sbjct: 215 LDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSA 274

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            A          IH Y  K  L+  +S+  +++  Y KCG ++ +  ++   ++K+ ++ 
Sbjct: 275 NANTGC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVAL 328

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA-----GLVDDGTRI 611
            A+IS YA+ G+    V  +  +Q +  +K D      ++   ++      GL   G  +
Sbjct: 329 TAIISHYAEKGDMGSVVRLYSIVQHL-DMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGV 387

Query: 612 FDSMVND----YGFIPAE---DHLSCMLDLLGR--AGYLDEAERVINSQHIQARSDNWWA 662
              ++ D     GFI      D++  +  L        L     VI+S     RS +  A
Sbjct: 388 KSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMA 447

Query: 663 LF-------------------SACAAHGNLRLGRIIAGLLLEREQD-KPSVYVLLSNIYA 702
           LF                   SAC  +GNL  G I+   +L    D +  V   L ++Y 
Sbjct: 448 LFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYV 507

Query: 703 AAGLWEEAANIRELLKR 719
             G  + A N+ + +K 
Sbjct: 508 KCGRMDFAENVFKSMKE 524



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 5/169 (2%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K+ L   N  +++ +++G   DA+ LF Q+  S    PD  +L++ L+AC    N  FG 
Sbjct: 423 KKTLSSWNSVISSCAQAGRSIDAMALFSQMTLS-GYGPDSITLASLLSACCQNGNLHFGE 481

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            LH Y LR  L     V   ++ +Y     +   + VF  ++ P + SW + +S     G
Sbjct: 482 ILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISGYGLFG 541

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
             ++A   + +M ++ +      ++ ++  CT  G  + G   F+ M K
Sbjct: 542 FHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKK 590


>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 663

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 299/561 (53%), Gaps = 40/561 (7%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H+ +   G +  V  +  L++      ++  A K+F++      +   +N ++ G +
Sbjct: 53  KHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQP--NKFMFNHLIKGYS 110

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS 324
           +     ++L+ +R M+   + P++ T   V+ AC    C  +G  VHAQ+ K G  ++  
Sbjct: 111 NSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHAC 170

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V NA + +Y +CG I  A  +F  + E+ +VSWN+MI+ Y++      A+L + EMQ VG
Sbjct: 171 VQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVG 230

Query: 385 IRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           + PD FT   LL+ S   G  ++   +H  + + GI  +  V+NAL+  YAK   +K A 
Sbjct: 231 LEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAK 290

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-------------------LMSE 482
            +F  M  +++++W  +IN +  +G     L+ F+++                   L +E
Sbjct: 291 SVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAE 350

Query: 483 ------------LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
                       +  ++ TL   LSSC+ +  L  GKQ H Y+  NN+    +L NA+I 
Sbjct: 351 AVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIID 410

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L  ++ VF  M EK+ +SWN +I A A HG GKEA+  F+ MQ  G + PD+ 
Sbjct: 411 MYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASG-VCPDEI 469

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT +LSACSH+GLVD G   F+ M   +G  P  +H +CM+DLLGR G L EA  +I  
Sbjct: 470 TFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKK 529

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W AL  AC  +GNL +G+ I   LLE  +    +YVLLSN+Y+ +  W++ 
Sbjct: 530 MPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDM 589

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
            NI ++L + G+ K    S+I
Sbjct: 590 KNIWKILDQNGIKKCRAISFI 610



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/532 (24%), Positives = 239/532 (44%), Gaps = 74/532 (13%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           V +    +S+  ++  + YA ++FD++P  +  ++N +I G + +      + L+R M  
Sbjct: 68  VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVC 127

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
             +  + ++   VL  C A      G  +H+   K G      V NA++ +Y  CG +  
Sbjct: 128 DGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITS 187

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF++        +S+N M++G + +GR EEA++ FR+M    L P   T V ++S  
Sbjct: 188 ARRVFDDISERTL--VSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVS 245

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                  +G  VH   + +G E  + V+NA + MY+ CG +  A  +F ++ +KD+VSW 
Sbjct: 246 TKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWT 305

Query: 359 TMISTYA-------------------------------QRNLGRSAILAYLEMQSVGIRP 387
            MI+ YA                               Q  L   A+  +  M   G+  
Sbjct: 306 CMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMA 365

Query: 388 DEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           ++ T  ++L+S    G + + +  H+++F N I  +  + NA+I  YAK   ++ A  +F
Sbjct: 366 NDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVF 425

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
             M  +N ++WN +I    L+G+  + ++ F ++  S + PDE T +  LS+C+    + 
Sbjct: 426 FGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVD 485

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+  H + + N     ++ G                       I  D   +  ++    
Sbjct: 486 TGQ--HYFEIMN-----LTFG-----------------------ISPDVEHYACMVDLLG 515

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           + G   EA+S  K M     +KPD   ++A+L AC   G +  G +I   ++
Sbjct: 516 RRGLLGEAISLIKKMP----VKPDVVVWSALLGACRTYGNLAIGKQIMKQLL 563



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 203/467 (43%), Gaps = 77/467 (16%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P+ +++   L ACA       G  +HA + + G+ ++  V N IL++Y     + S +RV
Sbjct: 132 PNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRV 191

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           F +I    + SW + ++  +KMG  + A                               +
Sbjct: 192 FDDISERTLVSWNSMINGYSKMGRSEEA-------------------------------V 220

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            +FREM ++ +  D ++   +LSV    G  + GR +H  +  +G      V NAL+ MY
Sbjct: 221 LMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMY 280

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-------------------- 273
             CGN+  A  VF++      D +S+  M++  A+ G ++                    
Sbjct: 281 AKCGNLKCAKSVFDQMLDK--DVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSI 338

Query: 274 -----------EALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
                      EA+  F  M  + +  ++ T V+++S+C       +G Q H+    +  
Sbjct: 339 IWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNI 398

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               ++ NA I MY+ CG +  A  +F  + EK+ VSWN +I   A    G+ AI  + +
Sbjct: 399 TLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEK 458

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN---GIITNIQVSNALISAYAK 433
           MQ+ G+ PDE TF  LL++   SG ++  +  H F  +N   GI  +++    ++    +
Sbjct: 459 MQASGVCPDEITFTGLLSACSHSGLVDTGQ--HYFEIMNLTFGISPDVEHYACMVDLLGR 516

Query: 434 NERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELL 479
              + +A  +   M  + +++ W+ L+      G    G Q   +LL
Sbjct: 517 RGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLL 563



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 180/377 (47%), Gaps = 16/377 (4%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           + S+  L+  N  +   S+ G  ++A+ +F ++     L+PD+++L   L+      N  
Sbjct: 194 DISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEV-GLEPDVFTLVGLLSVSTKHGNFD 252

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  +H + +  G++    V N ++ +Y    +L   K VF ++ + DV SWT  ++A  
Sbjct: 253 LGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYA 312

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G +D A E F++MP +++  +N++I    + G     + LF  M    V  ++ +  +
Sbjct: 313 NHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVA 372

Query: 195 VLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +LS C   G L  G+Q HS +  +  +   ++ NA+I MY  CG +  A  VF       
Sbjct: 373 ILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEK- 431

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----Q 309
            + +S+NV++  LA  G  +EA+  F  M  + + P E+TF  ++SA  C   G     Q
Sbjct: 432 -NAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSA--CSHSGLVDTGQ 488

Query: 310 VHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQEK-DIVSWNTMIS---T 363
            + + M   F     V + A  + +    G + EA  +  ++  K D+V W+ ++    T
Sbjct: 489 HYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRT 548

Query: 364 YAQRNLGRSAILAYLEM 380
           Y    +G+  +   LE+
Sbjct: 549 YGNLAIGKQIMKQLLEL 565



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 143/285 (50%), Gaps = 3/285 (1%)

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           P   T   L+     ++ ++ +HA + ++G+ T +     L+S+  +   ++ A+++F  
Sbjct: 34  PTHQTLHYLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQ 93

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +   N   +N LI G+  +  P++ L  +  ++   + P+++T+   L +CA  S    G
Sbjct: 94  IPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLG 153

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
             +H    K  + S   + NA++ +Y  CG +  + RVF+ + E+  +SWN++I+ Y++ 
Sbjct: 154 VCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKM 213

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G  +EAV  F+ MQ+VG ++PD  T   +LS  +  G  D G  +   MV   G      
Sbjct: 214 GRSEEAVLMFREMQEVG-LEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT-GIEIDSI 271

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             + ++D+  + G L  A+ V + Q +     +W  + +A A HG
Sbjct: 272 VTNALMDMYAKCGNLKCAKSVFD-QMLDKDVVSWTCMINAYANHG 315


>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
 gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
          Length = 623

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 204/642 (31%), Positives = 323/642 (50%), Gaps = 117/642 (18%)

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD- 151
           H  N +++    A  +   +++F    + DV SWT  +SA  + G +  A E+FD+ PD 
Sbjct: 43  HDPNRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALVSAYARRGMLRDARELFDR-PDA 101

Query: 152 -RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQL 210
            R++  + A+++G       D    LF+ M + +V                         
Sbjct: 102 RRNVVTWTALLSGYARARLVDEAEALFQRMPQRNV------------------------- 136

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
                       VS  N ++  Y   G V DAC +F+     V D  S+N+++  L   G
Sbjct: 137 ------------VSW-NTMLEAYAAAGRVGDACALFDRMP--VRDAGSWNILLATLVRSG 181

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
            V++A   F  M      P       VM                      A+T++ +   
Sbjct: 182 SVDKARELFGRM------PER----DVM----------------------AWTTMVDGV- 208

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
              +  GK+DEA ++F  + E+++VSWN MIS Y + +                 R DE 
Sbjct: 209 ---ARSGKVDEARVLFDSMPERNVVSWNAMISGYTRNH-----------------RIDE- 247

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
                 A   F++M E             +I   N +++ + +N+ +K+A ++F  M  R
Sbjct: 248 ------ALDLFMKMPE------------RDIASCNIMVTGFIQNKDLKRARELFDEMPER 289

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N++TW T++NG+L        L  FS +LM+  RP++ T   AL +C+ +++L  GKQ+H
Sbjct: 290 NVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEGKQVH 349

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             + K        + +A++ +YAKCG++  + ++F++  EKD ISWN +I+AYA HG G 
Sbjct: 350 QMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHHGVGI 409

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           EA+  ++ MQ+ G  +P+  T+  +LSACSH+GLVD+G +IF+SMVND      ++H +C
Sbjct: 410 EAILLYEKMQENG-YRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTC 468

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHGNLRLGRIIAGLLLEREQD 689
           ++DL  RAG LD+A+R+I+   I+  S + W AL   C AHGN  +G + A  LL+ E D
Sbjct: 469 LIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLLQAEPD 528

Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
               Y LLSNIYA+AG W+EAA IR  +   G+ KQPGCSWI
Sbjct: 529 NAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 570



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 34/342 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI LA L RSG    A  LF ++      + D+ + +T +   A       G    A  L
Sbjct: 171 NILLATLVRSGSVDKARELFGRMP-----ERDVMAWTTMVDGVAR-----SGKVDEARVL 220

Query: 85  RAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
              +     V+ N ++S Y     +     +F ++   D+ S    ++   +   +  A 
Sbjct: 221 FDSMPERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRAR 280

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
           E+FD+MP+R++  +  M+ G  +    ++ +GLF  M     R +  +F   L  C D  
Sbjct: 281 ELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLA 340

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G+Q+H ++ K+ F     V +AL+ +Y  CG +  A K+F+ ++    D IS+N +
Sbjct: 341 ALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREK--DLISWNGI 398

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           +   A  G   EA++ +  M     RP+++T+V ++SAC         H+  +  G + +
Sbjct: 399 IAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSAC--------SHSGLVDEGLKIF 450

Query: 323 TSVSN------------AAITMYSSCGKIDEACMIFARLQEK 352
            S+ N              I + S  G++D+A  +   L+ K
Sbjct: 451 ESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIK 492


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 193/649 (29%), Positives = 328/649 (50%), Gaps = 20/649 (3%)

Query: 96  NTILSLYKNARDLVSVKRVFSE-IQNP---DVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           NT+ SL   A     + +  ++ I N    D+ + T             +A  +F  +P 
Sbjct: 13  NTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPK 72

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVC--DAGLLEFGR 208
            D+ ++N ++ G + N      I L+  + +  ++  DN+++A  ++ C  D  L+    
Sbjct: 73  PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM---- 128

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
            LH+     G+   V V +AL+ +Y     VV A KVF+       D + +N M++GL  
Sbjct: 129 LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPER--DTVLWNTMINGLVK 186

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSV 325
               ++++  FR+M+   +R    T  +V+ A       +VG  +   A+K GF     V
Sbjct: 187 NCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV 246

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
               I++YS CG ++ A ++F R+   D++++N MIS +        ++  + E+   G 
Sbjct: 247 LTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE 306

Query: 386 RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           R    T   L+   +  G + +   IH F   +GII N  VS A  + Y K   I  A  
Sbjct: 307 RVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARH 366

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F     + ++ WN +I+G+  NG     +  F E++ +E  P+  T++  LS+CA++ S
Sbjct: 367 LFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGS 426

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK +H  +   NL   + +  A++ +YAKCG++  + ++F+ M EK+T++WN +I  
Sbjct: 427 LSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFG 486

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y  HG G EA+  +  M  +G   P   TF +VL ACSHAGLV +G  IF +MVN Y   
Sbjct: 487 YGLHGYGHEALKLYNEMLHLG-YNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIE 545

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H +CM+D+LGR+G L++A   I    ++     W  L  AC  H +  + R+ +  
Sbjct: 546 PLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASER 605

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L E +      YVLLSNIY+    + +AA+IR+++K+  + K PGC+ I
Sbjct: 606 LFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLI 654



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 251/562 (44%), Gaps = 49/562 (8%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  +   N+ +   S +     ++ L+  +  +  L PD ++ +  +AAC+N ++     
Sbjct: 72  KPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML-- 129

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            LHA+++  G  +   V + ++ LY     +V  ++VF  +   D   W T         
Sbjct: 130 -LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT--------- 179

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL- 196
                                 MI G  +N   D  I LFREM    VR D+ +  +VL 
Sbjct: 180 ----------------------MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLP 217

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           +  +   L+ G  +  L  K GF     V+  LI++Y  CG+V  A  +F        D 
Sbjct: 218 AAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINR--PDL 275

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-----QVH 311
           I+YN M+ G  + G  E ++  FR++L +  R S  T V ++   L    G+      +H
Sbjct: 276 IAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIP--LHSPFGHLHLACSIH 333

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              +KSG     +VS A   +Y+   +ID A  +F    EK +V+WN MIS Y Q     
Sbjct: 334 GFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTE 393

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           +AI  + EM      P+  T  ++L   A  G +   + +H  +    +  NI VS AL+
Sbjct: 394 TAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALV 453

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             YAK   I +A+Q+F +MS +N +TWNT+I G+ L+G+  + L+ ++E+L     P   
Sbjct: 454 DMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAV 513

Query: 489 TLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           T    L +C+    +  G++I H  V K  +   +     M+ +  + G L+ +L     
Sbjct: 514 TFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKK 573

Query: 548 M-IEKDTISWNALISAYAQHGE 568
           M +E     W  L+ A   H +
Sbjct: 574 MPVEPGPAVWGTLLGACMIHKD 595


>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 623

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 202/619 (32%), Positives = 316/619 (51%), Gaps = 89/619 (14%)

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
           FS +Q+P+       ++     G V  A  +FD+ PDRD+  + AM+      G      
Sbjct: 36  FSHVQDPN-----RRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEAS 90

Query: 175 GLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
            L   +H+ D RR+  ++ ++LS    A  ++  R L   + +      V   N ++  Y
Sbjct: 91  AL---LHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERN----VVSWNTMLEAY 143

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
            + G +  AC +F+     V D  S+N+++  L   G ++EA   F  M      P    
Sbjct: 144 ASAGRMGAACALFDGMP--VRDAGSWNILLAALVRSGTMDEARRLFERM------PER-- 193

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
             +VMS                      +T++    I+  +  G  DEA  +F  + E++
Sbjct: 194 --NVMS----------------------WTTM----ISGLARSGSADEARALFDGMPERN 225

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
           +VSWN MIS YA RNL                R DE       A   F+ M E       
Sbjct: 226 VVSWNAMISGYA-RNL----------------RIDE-------ALDLFMNMPE------- 254

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
                 ++   N +I+ + +N+ +K+A ++F  M  RN+++W T++NG L        LQ
Sbjct: 255 -----RDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQ 309

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F+ +L+  +RP++ T   A+ + + ++ L  G+Q+H  + K        + ++++ LYA
Sbjct: 310 VFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYA 369

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG++  + +VF++  EKD ISWN +I+AYA HG G EA++ ++ MQ+  R KP+  T+ 
Sbjct: 370 KCGEIRLARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIALYEKMQE-NRYKPNDVTYV 428

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
            +LSACSH+GLVD+G RIF+ M  D      ++H SC++DL  RAG LD+A+R+IN   +
Sbjct: 429 GLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKL 488

Query: 654 QARSDN-WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
           +  S   W AL   C AHGN  +G + A  LLE E D    Y LLSNIYA+AG W+EAA 
Sbjct: 489 KPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGKWKEAAK 548

Query: 713 IRELLKRTGVIKQPGCSWI 731
           IR  +   G+ KQPGCSWI
Sbjct: 549 IRSEMNDRGLKKQPGCSWI 567



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 223/511 (43%), Gaps = 66/511 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH-AYA 83
           N  +A L+ +G   DA  LF +        PD   +S T    A  R      QLH A A
Sbjct: 43  NRRIAELAAAGRVPDARRLFDRT-------PDRDVVSWTAMVAAYARQG----QLHEASA 91

Query: 84  LRAGLKAYPHVAN--TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           L     A  +V     +LS Y  AR +   + +F  +   +V SW T L A    G +  
Sbjct: 92  LLHRPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGA 151

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCD 200
           AC +FD MP RD   +N ++     +G  D    LF  M + +V     S+ +++S +  
Sbjct: 152 ACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLFERMPERNV----MSWTTMISGLAR 207

Query: 201 AGLLEFGRQLHSLVTK----------SGFSCLVSVVNAL-----------------ITMY 233
           +G  +  R L   + +          SG++  + +  AL                 IT +
Sbjct: 208 SGSADEARALFDGMPERNVVSWNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGF 267

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
               ++  A ++F+E      + +S+  MM+G       E AL  F  MLV  +RP+++T
Sbjct: 268 IQNKDLKKAQELFDEMPKR--NVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQVT 325

Query: 294 FVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F+  + A         G QVH    K+ F+    + ++ + +Y+ CG+I  A  +F    
Sbjct: 326 FLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLSG 385

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEM 407
           EKD++SWN MI+ YA    G  AI  Y +MQ    +P++ T+  LL++   SG ++  E 
Sbjct: 386 EKDVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKPNDVTYVGLLSACSHSGLVD--EG 443

Query: 408 IHAFVFI---NGIITNIQVSNALISAYAKNERIKQAYQIFH--NMSPRNIITWNTLINGF 462
           +  F ++     I    +  + LI   ++  R+  A ++ +   + P +   W+ L+ G 
Sbjct: 444 LRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGC 503

Query: 463 LLNGFPVQGLQHFSELLMSELRPDE---YTL 490
             +G    G      LL +E  PD    YTL
Sbjct: 504 NAHGNESIGDLAARNLLEAE--PDNAGTYTL 532



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 76/346 (21%)

Query: 308 YQVHAQAMKSGFEAYTSVS--NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +  H  A     +A++ V   N  I   ++ G++ +A  +F R  ++D+VSW  M++ YA
Sbjct: 22  FSYHGAAAVFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYA 81

Query: 366 -QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS 424
            Q  L  ++ L +        RPD                               N+   
Sbjct: 82  RQGQLHEASALLH--------RPDAR----------------------------RNVVTW 105

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-----------LLNGFPVQGLQ 473
            AL+S YA+  R+ +A  +F  M  RN+++WNT++  +           L +G PV+   
Sbjct: 106 TALLSGYARARRVDEARALFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAG 165

Query: 474 HFSELL--------MSELR------PDEYTLS--VALSSCARISSLRHGKQIHGYVLKNN 517
            ++ LL        M E R      P+   +S    +S  AR  S    + +   + + N
Sbjct: 166 SWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERN 225

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           ++S     NAMI+ YA+   +D +L +F  M E+D  SWN +I+ + Q+ + K+A   F 
Sbjct: 226 VVS----WNAMISGYARNLRIDEALDLFMNMPERDVASWNIMITGFIQNKDLKKAQELFD 281

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            M      K +  ++T +++ C      +   ++F+ M+ D G  P
Sbjct: 282 EMP-----KRNVVSWTTMMNGCLQGNESEMALQVFNGMLVD-GIRP 321



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 41/205 (20%)

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           V   +  S +   N  I   A  G +  + R+F+   ++D +SW A+++AYA+ G+  EA
Sbjct: 30  VFSTDAFSHVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEA 89

Query: 573 VSCFKAMQDVGRIKPDQ----ATFTAVLSACSHAGLVDDGTRIFDSMVND---------- 618
            +           +PD      T+TA+LS  + A  VD+   +FD M             
Sbjct: 90  SALLH--------RPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLE 141

Query: 619 --------------YGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARSD-NWW 661
                         +  +P  D  S   +L  L R+G +DEA R+   + +  R+  +W 
Sbjct: 142 AYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEARRLF--ERMPERNVMSWT 199

Query: 662 ALFSACAAHGNLRLGRIIAGLLLER 686
            + S  A  G+    R +   + ER
Sbjct: 200 TMISGLARSGSADEARALFDGMPER 224


>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 217/716 (30%), Positives = 364/716 (50%), Gaps = 60/716 (8%)

Query: 40  ALHLFVQIHSSHKLKP--DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA-- 95
           AL L+  ++ + +  P  D Y+ S  L ACA  R    G  +HA+ LR   ++ P  A  
Sbjct: 81  ALRLYALLNHAARPAPRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRA-RSLPDTAVL 139

Query: 96  -NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N++L+LY +                           A  + G VD    +FD MP +++
Sbjct: 140 RNSLLNLYASC--------------------------ARHRRGGVDVVRRLFDAMPKKNV 173

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLV 214
             +N +     + G  D  + +F  M +  VR    SF +V     +G   +   L+ L+
Sbjct: 174 VSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGSGDPSWPFLLYGLL 233

Query: 215 TKSGFSCL--VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            K G   +  + VV++ I M+    +V  A  VF+ A     +   +N M+ G    G+ 
Sbjct: 234 IKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIE--VWNTMITGYVQNGQF 291

Query: 273 EEALIRFRDMLVASLRPSEL-TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSV--S 326
            +A+  F  +L +   PS++ TF+S ++A       R+G Q+H   MK G  +   V   
Sbjct: 292 SQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMK-GMHSTLPVILG 350

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA + MYS CG +  A  +F RL EKDIVSWNTMI+ + Q +     +L   +MQ  G  
Sbjct: 351 NALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFI 410

Query: 387 PDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD  T  ++L++   +G +++ +  H ++  +GI     + + LI  Y+K+ RI  A ++
Sbjct: 411 PDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGI-EGEGLESYLIDMYSKSGRIDMAQRV 469

Query: 444 FHNM-SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           F    + R+ +TWN +I G+  +G P Q +  F  ++ + + P   TL+  L +C  +  
Sbjct: 470 FDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGG 529

Query: 503 -LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            +  GKQIH + L+++L + + +G A++ +Y+KCG++  +  VF  M EK T+++  +IS
Sbjct: 530 GVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMIS 589

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
              QHG G+ A+S F +M+D G +KPD  TF A +SAC+++GLVD+G  ++ SM   +G 
Sbjct: 590 GLGQHGFGERALSLFYSMRDKG-LKPDAVTFLAAISACNYSGLVDEGLSLYRSM-ETFGL 647

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN----WWALFSACAAHGNLRLGR 677
                H  C++DLL +AG +DEA   + S        N    W +L ++C A G + L  
Sbjct: 648 AATPQHHCCIVDLLAKAGRVDEAYDFVES---LGEDGNFIAIWGSLLASCKAQGKMELAA 704

Query: 678 IIAGLLL--EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                +L  E++       VLLS ++AA G W  A ++R+ ++  G+ K+ G +WI
Sbjct: 705 WATEKVLNIEKQYGHAGYNVLLSQLFAAEGNWSSADSLRKEMRLRGLRKEAGSTWI 760



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 203/448 (45%), Gaps = 48/448 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++G +  A+ LF+QI  S ++  D+ +  + + A +  ++   G QLH Y +
Sbjct: 279 NTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLM 338

Query: 85  RAGLKAYPHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +      P +  N ++ +Y    ++ +   +F  +   D+ SW                 
Sbjct: 339 KGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSW----------------- 381

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
                         N MIT   +N ++  G+ L  +M K     D  +  +VLS   + G
Sbjct: 382 --------------NTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTG 427

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ G+Q H  + + G      + + LI MY   G +  A +VF +  G   D +++N M
Sbjct: 428 DLQIGKQSHGYLIRHGIEG-EGLESYLIDMYSKSGRIDMAQRVF-DGYGNDRDEVTWNAM 485

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC------LCPRVGYQVHAQAMK 316
           + G    G+ E+A+++FR M+ A + P+ +T  SV+ AC      +C   G Q+H+ A++
Sbjct: 486 IAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVC--AGKQIHSFALR 543

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              +    V  A + MYS CG+I  A  +F  + EK  V++ TMIS   Q   G  A+  
Sbjct: 544 HSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGERALSL 603

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  M+  G++PD  TF + +++   SG ++    ++  +   G+    Q    ++   AK
Sbjct: 604 FYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATPQHHCCIVDLLAK 663

Query: 434 NERIKQAYQIFHNMSPRN--IITWNTLI 459
             R+ +AY    ++      I  W +L+
Sbjct: 664 AGRVDEAYDFVESLGEDGNFIAIWGSLL 691


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 204/625 (32%), Positives = 309/625 (49%), Gaps = 99/625 (15%)

Query: 180 MHKLDVRRDNY-----SFASVLSVCDAGLLEFG-RQLHSLVTKSGFSCLVSVVNALITMY 233
           M K  + RD Y      FA +L  C       G R +H+ +  + FS  + + N LI +Y
Sbjct: 1   MAKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVY 60

Query: 234 FNCGNVVDACKVFEE-----------------AKGYV------------CDHISYNVMMD 264
             C  + DA K+F+                    G++             D  S+N M+ 
Sbjct: 61  GKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVS 120

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEA 321
           G A   R EE+L  F  M       +E +F S +SAC   +   +G QVHA   KS +  
Sbjct: 121 GFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYST 180

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              + +A I MYS CG +  A  +F+ + E+++V+WN++I+ Y Q      A+  ++ M 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMM 240

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVF-INGIITNIQVSNALISAYAKNERI 437
             G+ PDE T  S++++   +  ++    IHA V   N    ++ + NAL+  YAK  ++
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300

Query: 438 KQAYQIFHNMS-------------------------------PRNIITWNTLINGFLLNG 466
            +A ++F  MS                                RN+++WN LI G+  NG
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L+ F  L    + P  YT                     G +LK+++     +GN
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTF--------------------GNLLKSDIF----VGN 396

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +Y KCG ++   RVF  M E+D +SWNA+I  YAQ+G G EA+  F+ M   G  K
Sbjct: 397 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGE-K 455

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  T   VL ACSHAGLV++G   F SM  ++G IP +DH +CM+DLLGRAG L+EA+ 
Sbjct: 456 PDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKN 514

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I +  +   +  W +L +AC  HGN+ +G+  A  LLE +      YVLLSN+YA  G 
Sbjct: 515 LIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGR 574

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W +   +R+L+++ GV KQPGCSWI
Sbjct: 575 WGDVVRVRKLMRQQGVTKQPGCSWI 599



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 157/571 (27%), Positives = 269/571 (47%), Gaps = 72/571 (12%)

Query: 49  SSHKLKPDIY-----SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYK 103
           + H L  D+Y       +  L +C   R+A     +HA  L         + N ++ +Y 
Sbjct: 2   AKHGLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYG 61

Query: 104 NARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG 163
               L   +++F  +   + ++W + +S  TK G +D A  +F  MP+ D   +N+M++G
Sbjct: 62  KCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSG 121

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSC 221
             ++   +  +  F +MH+ D   + YSF S LS C AGL++   G Q+H+LV+KS +S 
Sbjct: 122 FAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSAC-AGLMDLNMGTQVHALVSKSRYST 180

Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDGLASVGRVEEALIRFR 280
            V + +ALI MY  CG+V  A +VF    G +  + +++N ++      G   EAL  F 
Sbjct: 181 DVYMGSALIDMYSKCGSVACAEEVF---SGMIERNLVTWNSLITCYEQNGPASEALEVFV 237

Query: 281 DMLVASLRPSELTFVSVMSAC--LCP-RVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSC 336
            M+ + L P E+T  SV+SAC  LC  + G Q+HA+ +K+  F     + NA + MY+ C
Sbjct: 238 RMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKC 297

Query: 337 GKIDEACMIFARLQ-------------------------------EKDIVSWNTMISTYA 365
            K++EA  +F R+                                ++++VSWN +I+ Y 
Sbjct: 298 SKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYT 357

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN 425
           Q      A+  +  ++   I P  +TFG+LL S                     +I V N
Sbjct: 358 QNGENEEALRLFRLLKRESIWPTHYTFGNLLKS---------------------DIFVGN 396

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LI  Y K   I+   ++F  M  R+ ++WN +I G+  NG+  + LQ F ++L+   +P
Sbjct: 397 SLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKP 456

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           D  T+   L +C+    +  G+     + ++ LI        M+ L  + G L+ +  + 
Sbjct: 457 DHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLI 516

Query: 546 NMM-IEKDTISWNALISAYAQHGE---GKEA 572
             M +  D + W +L++A   HG    GK A
Sbjct: 517 EAMPVNPDAVVWGSLLAACKVHGNIEMGKHA 547


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 178/536 (33%), Positives = 290/536 (54%), Gaps = 13/536 (2%)

Query: 204 LEFGRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           L+   Q+HS LVT +  + L ++ N L+ +Y  CG++     +F        + +++  +
Sbjct: 113 LKHATQIHSQLVTTNNHASLANI-NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTL 171

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
           ++ L+   +  +AL  F  M    + P+  TF +++ AC    +   G Q+HA   K  F
Sbjct: 172 INQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCF 231

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V+ A + MY+ CG +  A  +F  +  +++VSWN+MI  + +  L   AI  + E
Sbjct: 232 LNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFRE 291

Query: 380 MQSVGIRPDEFTFGSLL-ASSGFIEM--VEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           + S+G  PD+ +  S+L A +G +E+   + +H  +   G++  + V N+L+  Y K   
Sbjct: 292 VLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGL 349

Query: 437 IKQAYQIFHNMSPRNIITWNTLING-FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            + A ++F     R+++TWN +I G F    F  Q   +F  ++   + PDE + S    
Sbjct: 350 FEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE-QACTYFQAMIREGVEPDEASYSSLFH 408

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           + A I++L  G  IH +VLK   +    + ++++T+Y KCG +  + +VF    E + + 
Sbjct: 409 ASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVC 468

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W A+I+ + QHG   EA+  F+ M + G + P+  TF +VLSACSH G +DDG + F+SM
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEG-VVPEYITFVSVLSACSHTGKIDDGFKYFNSM 527

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            N +   P  +H +CM+DLLGR G L+EA R I S   +  S  W AL  AC  H N+ +
Sbjct: 528 ANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEM 587

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +A  L + E D P  Y+LLSNIY   G+ EEA  +R L+   GV K+ GCSWI
Sbjct: 588 GREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWI 643



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 179/373 (47%), Gaps = 42/373 (11%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LSRS     AL  F ++ ++  + P+ ++ S  L ACA+    + G Q+HA   +     
Sbjct: 175 LSRSNKPFQALTFFNRMRTT-GIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLN 233

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
            P VA  +L +Y     ++  + VF E                               MP
Sbjct: 234 DPFVATALLDMYAKCGSMLLAENVFDE-------------------------------MP 262

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE--FGR 208
            R+L  +N+MI G  +N      IG+FRE+  L +  D  S +SVLS C AGL+E  FG+
Sbjct: 263 HRNLVSWNSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSAC-AGLVELDFGK 319

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H  + K G   LV V N+L+ MY  CG   DA K+F    G   D +++NVM+ G   
Sbjct: 320 QVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLF--CGGGDRDVVTWNVMIMGCFR 377

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
               E+A   F+ M+   + P E ++ S+  A         G  +H+  +K+G    + +
Sbjct: 378 CRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRI 437

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S++ +TMY  CG + +A  +F   +E ++V W  MI+ + Q      AI  + EM + G+
Sbjct: 438 SSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGV 497

Query: 386 RPDEFTFGSLLAS 398
            P+  TF S+L++
Sbjct: 498 VPEYITFVSVLSA 510



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 177/417 (42%), Gaps = 68/417 (16%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +    ++  Y  A+ +F ++ S   L PD  S+S+ L+ACA L    FG Q+H
Sbjct: 266 LVSWNSMIVGFVKNKLYGRAIGVFREVLS---LGPDQVSISSVLSACAGLVELDFGKQVH 322

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ GL    +V N+++ +Y          ++F    + DV +W   +  C +  + +
Sbjct: 323 GSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE 382

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SV 198
            AC  F  M                            RE     V  D  S++S+   S 
Sbjct: 383 QACTYFQAM---------------------------IRE----GVEPDEASYSSLFHASA 411

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
             A L + G  +HS V K+G      + ++L+TMY  CG+++DA +VF E K +  + + 
Sbjct: 412 SIAALTQ-GTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEH--NVVC 468

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSG 318
           +  M+      G   EA+  F +ML   + P  +TFVSV+SAC         H   +  G
Sbjct: 469 WTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSAC--------SHTGKIDDG 520

Query: 319 FEAYTSVSNA------------AITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST-- 363
           F+ + S++N              + +    G+++EAC     +  E D + W  ++    
Sbjct: 521 FKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACG 580

Query: 364 -YAQRNLGRSAI--LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            +A   +GR     L  LE  + G   +     ++    G +E  + +   + ING+
Sbjct: 581 KHANVEMGREVAERLFKLEPDNPG---NYMLLSNIYIRHGMLEEADEVRRLMGINGV 634



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 18/210 (8%)

Query: 444 FHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           F  + P  R +  W  L   +  +G P      FS +      PD   L   L++ A++ 
Sbjct: 64  FEGLGPMSREVAFWLQLFTSYQ-SGVP--KFHQFSSV------PD---LKHLLNNAAKLK 111

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT--ISWNAL 559
           SL+H  QIH  ++  N  + ++  N ++ LYAKCG +  +L +FN      T  ++W  L
Sbjct: 112 SLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTL 171

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I+  ++  +  +A++ F  M+  G I P+  TF+A+L AC+HA L+ +G +I  ++++ +
Sbjct: 172 INQLSRSNKPFQALTFFNRMRTTG-IYPNHFTFSAILPACAHAALLSEGQQI-HALIHKH 229

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
            F+      + +LD+  + G +  AE V +
Sbjct: 230 CFLNDPFVATALLDMYAKCGSMLLAENVFD 259


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  312 bits (800), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 208/683 (30%), Positives = 334/683 (48%), Gaps = 39/683 (5%)

Query: 56   DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
            D Y+ +  L  C    +A  G  +H + +R+G                       + R+ 
Sbjct: 427  DSYAYARLLQGCVARGDARGGRAVHGHVVRSG----------------------GLARL- 463

Query: 116  SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                  D++     L+  TK+G    A  VFD +P+R++  +  ++ G    G  +    
Sbjct: 464  ------DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASA 517

Query: 176  LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            LF+ +       + +   +VL +  A   L     +H+   K G      V +ALI  Y 
Sbjct: 518  LFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYS 577

Query: 235  NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             CG V DA +VF+   G   D +++  M+   +     E  L  F  M VA  + +    
Sbjct: 578  MCGVVSDARRVFDGIVGK--DAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFAL 635

Query: 295  VSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
             SV+ A +C     +G  +HA ++K+ ++    V  A + MY+ CG I++A + F  +  
Sbjct: 636  TSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTN 695

Query: 352  KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMI 408
             D++ W+ MIS YAQ N    A   ++ M    + P+EF+  S+L   A+   +++ + I
Sbjct: 696  DDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQI 755

Query: 409  HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
            H      G  + + V NALI  YAK   ++ + +IF ++   N ++WNT+I G+  +GF 
Sbjct: 756  HNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFG 815

Query: 469  VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
               L  F E+  + +   + T S  L +CA  +S+ H  Q+H  + K+   S   + N++
Sbjct: 816  EAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSL 875

Query: 529  ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
            I  YAKCG +  +  +F  + E D +SWNA+IS YA HG+   A   F  M     IK +
Sbjct: 876  IDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSK-NSIKAN 934

Query: 589  QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
              TF A+LS C   GLV  G  +FDSM  D+G  P+ +H +C++ LLGRAG L++A   I
Sbjct: 935  DITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFI 994

Query: 649  NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                    +  W AL S+C  H N+ LGR  A  +LE E    + YVLLSN+Y+AAG  +
Sbjct: 995  GDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLD 1054

Query: 709  EAANIRELLKRTGVIKQPGCSWI 731
            + A  R+ ++  GV K+PG SW+
Sbjct: 1055 QVAFFRKSMRNIGVRKEPGLSWV 1077



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 134/531 (25%), Positives = 239/531 (45%), Gaps = 58/531 (10%)

Query: 38   QDALHLFVQIHSS-HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
            ++ L +F ++  +  KL P  ++L++ L A   L +   G  +HA +++       HV  
Sbjct: 614  ENTLQIFSKMRVAVSKLNP--FALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYG 671

Query: 97   TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
             +L +Y    ++   +  F  + N DV  W+  +S   +                     
Sbjct: 672  ALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQ--------------------- 710

Query: 157  YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
                   C +N   +    LF  M +  V  + +S +SVL  C +  LL+ G+Q+H+   
Sbjct: 711  -------CNQN---EQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAI 760

Query: 216  KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            K G    + V NALI +Y  C ++  + ++F   +    + +S+N ++ G +  G  E A
Sbjct: 761  KIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDV--NEVSWNTIIVGYSKSGFGEAA 818

Query: 276  LIRFRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            L  FR+M  AS+  +++T+ SV+ AC        VG QVH    KS F + T VSN+ I 
Sbjct: 819  LSVFREMRAASVPSTQVTYSSVLRACASTASINHVG-QVHCLIEKSTFNSDTIVSNSLID 877

Query: 332  MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
             Y+ CG I +A  IF  L+E D+VSWN +IS YA       A   +  M    I+ ++ T
Sbjct: 878  SYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDIT 937

Query: 392  FGSLLA---SSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
            F +LL+   S+G + + + +  +    +GI  +++    ++    +  R+  A     ++
Sbjct: 938  FVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDI 997

Query: 448  -SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS-------SCAR 499
             S  + + W  L++  +++      L  FS   + E+ P + T  V LS       S  +
Sbjct: 998  PSAPSAMVWRALLSSCIVHKN--VELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQ 1055

Query: 500  ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
            ++  R   +  G V K   +S + +   +        D  C +RV N M+E
Sbjct: 1056 VAFFRKSMRNIG-VRKEPGLSWVEIKGEVHAFSVGSEDHPC-MRVINAMLE 1104


>gi|125605681|gb|EAZ44717.1| hypothetical protein OsJ_29347 [Oryza sativa Japonica Group]
          Length = 701

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 212/716 (29%), Positives = 359/716 (50%), Gaps = 53/716 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +++   R+G    A+ +F  +      +P+ ++ S  L+ACA     + G  +H   L
Sbjct: 30  NAAVSGAVRNGEGGLAVEMFRDMVWG-SCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 88

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    V  +++++Y    D+ +  R F  +   +V SWTT ++   +         
Sbjct: 89  RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQ--------- 139

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                   D PV +AM+              L REM +  V  + Y+  S+L  C    +
Sbjct: 140 -------DDEPV-SAML--------------LLREMVRNGVAINKYTATSILLACAQMSM 177

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H +V K+       V  ALI+ Y N G +  + KVFEEA G V +   ++  +
Sbjct: 178 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEA-GTVSNRSIWSAFI 236

Query: 264 DGLASVGRVEEALIR----FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
            G+++      +L+R     R M    LRP++  + SV S+      G Q+H+ A+K GF
Sbjct: 237 SGVSN-----HSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGF 291

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A  TMYS C  + ++  +F  +QE+D VSW  M++ +A       A L +  
Sbjct: 292 IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRN 351

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF-INGIITNIQVSNALISAYAKNE 435
           M   G +PD  +  ++L++    E +   + +H     + G  T I  ++  IS Y+K +
Sbjct: 352 MILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFI--NDCFISMYSKCQ 409

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A +IF     ++ + W+++I+G+  NG   + +  F  ++ + +R D Y  S  LS
Sbjct: 410 GVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILS 469

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            CA I+   + K +HGY +K  ++S  S+ ++++ +Y++ G++D S +VF+ +   D ++
Sbjct: 470 LCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVA 529

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I  YAQHG  + A++ F  M  +G ++PD     +VLSACS  GLV+ G   F+SM
Sbjct: 530 WTTIIDGYAQHGSSQNALAMFDLMVQLG-VRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 588

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              YG  P   H  CM+DLLGR+G L EA+  ++S  ++     W  L +AC  H +  L
Sbjct: 589 RTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVL 648

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +   + E   D  S +  LSNI A +G WEE A IR+ +K  GV K+PG S +
Sbjct: 649 GRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 701



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 283/592 (47%), Gaps = 29/592 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +  A  VF          +NA ++G   NG   + + +FR+M       ++++++ 
Sbjct: 7   KSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSG 66

Query: 195 VLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            LS C AG  L  GR +H LV +      V V  +L+ MY  CG++  A + F      V
Sbjct: 67  ALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMP--V 124

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            + +S+   + G         A++  R+M+   +  ++ T  S++ AC      R   Q+
Sbjct: 125 RNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREASQI 184

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS----WNTMISTYAQ 366
           H   +K+       V  A I+ Y++ G I+ +  +F   +E   VS    W+  IS  + 
Sbjct: 185 HGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSNRSIWSAFISGVSN 241

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
            +L RS  L    M   G+RP++  + S+ +S   IE    +H+     G I  I V +A
Sbjct: 242 HSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGFIHGILVGSA 300

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L + Y++ + ++ +Y++F  M  R+ ++W  ++ GF  +G  V+    F  +++   +PD
Sbjct: 301 LSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNMILDGFKPD 360

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             +L+  LS+C R   L  GK++HG+ L+    +   + +  I++Y+KC  +  + R+F+
Sbjct: 361 HVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTF-INDCFISMYSKCQGVQTARRIFD 419

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
               KD + W+++IS YA +G G+EA+S F+ M     I+ D    +++LS C+     D
Sbjct: 420 ATPRKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYICSSILSLCA-----D 473

Query: 607 DGTRIFDSMVNDY----GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
                +   ++ Y    G +  +   S ++ +  R+G +D++ +V +   +      W  
Sbjct: 474 IARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLV-AWTT 532

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAAN 712
           +    A HG+ +    +  L+++    +P   VL+S + A +  GL E+  N
Sbjct: 533 IIDGYAQHGSSQNALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLVEQGFN 583



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 216/457 (47%), Gaps = 31/457 (6%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           ++ +    G + DA +VF  A G     + +N  + G    G    A+  FRDM+  S  
Sbjct: 1   MVDLLAKSGRLRDALRVF--ADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCE 58

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+  T+   +SAC       VG  VH   ++   E    V  + + MY+ CG +  A   
Sbjct: 59  PNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMRE 118

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F R+  +++VSW T I+ + Q +   SA+L   EM   G+  +++T  S+L +   + MV
Sbjct: 119 FWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMV 178

Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH---NMSPRNIITWNTLI 459
                IH  V    +  +  V  ALIS Y     I+ + ++F     +S R+I  W+  I
Sbjct: 179 REASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSI--WSAFI 236

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
           +G + N   ++ +Q    +    LRP++   +   SS   ++S+  G Q+H   +K   I
Sbjct: 237 SG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS---VNSIEFGGQLHSSAIKEGFI 292

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
             + +G+A+ T+Y++C ++  S +VF  M E+D +SW A+++ +A HG   EA   F+ M
Sbjct: 293 HGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRNM 352

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG---FIPAEDHLSCMLDLLG 636
              G  KPD  + TA+LSAC+    +  G  +    +  YG   FI       C + +  
Sbjct: 353 ILDG-FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFIN-----DCFISMYS 406

Query: 637 RAGYLDEAERVINSQHIQARSDN--WWALFSACAAHG 671
           +   +  A R+ ++     R D   W ++ S  A +G
Sbjct: 407 KCQGVQTARRIFDA---TPRKDQVMWSSMISGYATNG 440



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 127/253 (50%), Gaps = 12/253 (4%)

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           ++   AK+ R++ A ++F +  P + + WN  ++G + NG     ++ F +++     P+
Sbjct: 1   MVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPN 60

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +T S ALS+CA    L  G+ +HG VL+ +    + +G +++ +YAKCGD+  ++R F 
Sbjct: 61  SFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFW 120

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  ++ +SW   I+ + Q  E   A+   + M   G +  ++ T T++L AC+   +V 
Sbjct: 121 RMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVR 179

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           + ++I   MV     +  E +L C     ++      G+++ +E+V       +    W 
Sbjct: 180 EASQIH-GMV-----LKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWS 233

Query: 662 ALFSACAAHGNLR 674
           A  S  + H  LR
Sbjct: 234 AFISGVSNHSLLR 246



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 167/351 (47%), Gaps = 19/351 (5%)

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           + + +  G++ +A  +FA       V WN  +S   +   G  A+  + +M      P+ 
Sbjct: 2   VDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNS 61

Query: 390 FTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           FT+   L++    E + +   +H  V       ++ V  +L++ YAK   +  A + F  
Sbjct: 62  FTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWR 121

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RN+++W T I GF+ +  PV  +    E++ + +  ++YT +  L +CA++S +R  
Sbjct: 122 MPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLACAQMSMVREA 181

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS----WNALISA 562
            QIHG VLK  +     +  A+I+ Y   G ++ S +VF    E  T+S    W+A IS 
Sbjct: 182 SQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFE---EAGTVSNRSIWSAFISG 238

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
            + H   + +V   + M   G ++P+   + +V S+ +    ++ G ++  S + + GFI
Sbjct: 239 VSNHSLLR-SVQLLRRMFHQG-LRPNDKCYASVFSSVNS---IEFGGQLHSSAIKE-GFI 292

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGN 672
                 S +  +  R   + ++ +V   + +Q R   +W A+ +  A HG+
Sbjct: 293 HGILVGSALSTMYSRCDNVQDSYKVF--EEMQERDGVSWTAMVAGFATHGH 341


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/542 (33%), Positives = 289/542 (53%), Gaps = 22/542 (4%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMD 264
           G QLH  + K GF     + N LI MY  CG +  A +VF    G + +   +S+  +M 
Sbjct: 23  GAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVF----GGMPERNVVSWTALMV 78

Query: 265 GLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
           G    G   E L     M  ++ + P+E T  + + AC        G  +H   +++GFE
Sbjct: 79  GFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFE 138

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
            +  V+N+ + +YS  G+I +A  +F     +++V+WN MIS YA    GR ++L + EM
Sbjct: 139 GHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREM 198

Query: 381 Q-----SVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIIT--NIQVSNALISA 430
           Q         +PDEFTF SLL + G +        +HA + I G+ T  N  ++ AL+  
Sbjct: 199 QQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDM 258

Query: 431 YAKNE-RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
           Y K    +  A Q+F+ +  +N I W T+I G    G   + ++ F     S +R D + 
Sbjct: 259 YVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHV 318

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           LS  +   A  + +  G+Q+H Y +K      +S+ N++I +Y KCG  D + R F  + 
Sbjct: 319 LSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVP 378

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            ++ +SW A+I+   +HG G+EA+  F+ M+  G ++PD+  + A+LSACSH+GLV++  
Sbjct: 379 ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEG-VEPDEVAYLALLSACSHSGLVEECR 437

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
           R F ++ +D    P  +H +CM+DLLGRAG L EA+ ++ +  +      W  L SAC  
Sbjct: 438 RYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRV 497

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           H N+ +GR     LL  + D P  YV+LSNI+A AG W E   +R  ++R G+ KQ GCS
Sbjct: 498 HKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMRRRGLRKQGGCS 557

Query: 730 WI 731
           W+
Sbjct: 558 WV 559



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 226/528 (42%), Gaps = 74/528 (14%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G QLH   L+ G  +   + N ++ +Y                                K
Sbjct: 23  GAQLHGALLKLGFGSDTMLGNNLIDMY-------------------------------AK 51

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFAS 194
            G +  A EVF  MP+R++  + A++ G   +G     + L   M  L DV  + ++ ++
Sbjct: 52  CGELRMAGEVFGGMPERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSA 111

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C   G +  G  +H    ++GF     V N+L+ +Y   G + DA +VF+   G V
Sbjct: 112 SLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFD---GTV 168

Query: 254 CDH-ISYNVMMDGLASVGRVEEALIRFRDMLV-----ASLRPSELTFVSVMSAC---LCP 304
             + +++N M+ G A  G   ++L+ FR+M          +P E TF S++ AC      
Sbjct: 169 FRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAA 228

Query: 305 RVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCG-KIDEACMIFARLQEKDIVSWNTMI 361
           R G QVHA  +  G    ++  ++ A + MY  C   +  A  +F RL++K+ + W T+I
Sbjct: 229 REGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVI 288

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII 418
             +AQ    + A+  +    S G+R D     S++   A    +E    +H +       
Sbjct: 289 VGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAG 348

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            ++ V+N+LI  Y K     +A + F  +  RN+++W  +ING   +G   + +  F E+
Sbjct: 349 LDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEM 408

Query: 479 LMSELRPDEYTLSVALSSCAR----------ISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
               + PDE      LS+C+            S++RH ++         L  +      M
Sbjct: 409 RAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRR---------LRPRAEHYACM 459

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGE---GKEA 572
           + L  + G+L  +  +   M    T+  W  L+SA   H     G+EA
Sbjct: 460 VDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSACRVHKNVTVGREA 507



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 173/381 (45%), Gaps = 38/381 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  ++ L L   + S   + P+ ++LS +L AC  + + A G  +H   +RAG + + 
Sbjct: 82  RHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHH 141

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VAN+++ LY     +   +RVF      ++ +W   +S     GH   +  VF +M   
Sbjct: 142 VVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQ- 200

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
                                    R   + D + D ++FAS+L  C + G    G Q+H
Sbjct: 201 -------------------------RRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVH 235

Query: 212 SLVTKSGFSCLVSVV--NALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLAS 268
           + +   G S   + +   AL+ MY  C  ++  A +VF   +    + I +  ++ G A 
Sbjct: 236 AAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQK--NAIQWTTVIVGHAQ 293

Query: 269 VGRVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            G+V+EA+  F     + +R       + V V +       G QVH   +K+      SV
Sbjct: 294 EGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSV 353

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           +N+ I MY  CG  DEA   F  +  +++VSW  MI+   +   G+ AI  + EM++ G+
Sbjct: 354 ANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGV 413

Query: 386 RPDEFTFGSLLAS---SGFIE 403
            PDE  + +LL++   SG +E
Sbjct: 414 EPDEVAYLALLSACSHSGLVE 434



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 123/225 (54%), Gaps = 5/225 (2%)

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           A+S  I     +H  +   G  ++  + N LI  YAK   ++ A ++F  M  RN+++W 
Sbjct: 15  AASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWT 74

Query: 457 TLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
            L+ GFL +G   + L+    +  +S++ P+E+TLS +L +C  +  +  G  IHG  ++
Sbjct: 75  ALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVR 134

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
                   + N+++ LY+K G +  + RVF+  + ++ ++WNA+IS YA  G G++++  
Sbjct: 135 AGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLV 194

Query: 576 FKAMQDVGRI----KPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           F+ MQ   +     +PD+ TF ++L AC   G   +G ++  +MV
Sbjct: 195 FREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMV 239



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 165/373 (44%), Gaps = 57/373 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKL----KPDIYSLSTTLAACANLRNAAFG 76
           L+  N  ++  + +GH +D+L +F ++    +     +PD ++ ++ L AC +L  A  G
Sbjct: 172 LVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREG 231

Query: 77  NQLHAYALRAGLKAYPH--VANTILSLYKNARDLVSVK-RVFSEIQNPDVYSWTTFLSAC 133
            Q+HA  +  G+    +  +A  +L +Y   R L+ +  +VF+ ++  +   WTT +   
Sbjct: 232 AQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGH 291

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            + G V  A E+F +                                    VR D +  +
Sbjct: 292 AQEGQVKEAMELFGRFWSS-------------------------------GVRADGHVLS 320

Query: 194 SVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           SV+ V  D  L+E GRQ+H    K+     VSV N+LI MY  CG   +A + F E    
Sbjct: 321 SVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPAR 380

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPR 305
             + +S+  M++GL   G  +EA+  F +M    + P E+ +++++SAC        C R
Sbjct: 381 --NVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRR 438

Query: 306 VGYQV-HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS-WNTMIS- 362
               + H + ++   E Y  +    + +    G++ EA  + A +     V  W T++S 
Sbjct: 439 YFSAIRHDRRLRPRAEHYACM----VDLLGRAGELSEAKDLVATMPMAPTVGVWQTLLSA 494

Query: 363 --TYAQRNLGRSA 373
              +    +GR A
Sbjct: 495 CRVHKNVTVGREA 507



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 6/217 (2%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L + A  S++  G Q+HG +LK    S   LGN +I +YAKCG+L  +  VF  M E++ 
Sbjct: 11  LRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNV 70

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW AL+  + +HG+ +E +    AM+ +  + P++ T +A L AC   G +  G  I  
Sbjct: 71  VSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHG 130

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           + V   GF       + ++ L  + G + +A RV +   +      W A+ S  A  G+ 
Sbjct: 131 ACVR-AGFEGHHVVANSLVLLYSKGGRIGDARRVFDGT-VFRNLVTWNAMISGYAHAGHG 188

Query: 674 RLGRIIAGLLLEREQD----KPSVYVLLSNIYAAAGL 706
           R   ++   + +R Q+    +P  +   S + A   L
Sbjct: 189 RDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSL 225


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 256/461 (55%), Gaps = 8/461 (1%)

Query: 279 FRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           +  M   ++ P+  TF  V  AC      R+    H +  K G +      N+ +TMY  
Sbjct: 105 YHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFR 164

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGS 394
           CG+   A  +F  + EKD+VSWN+++S YA+    R A+  +  + +  G  PDE +  S
Sbjct: 165 CGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVS 224

Query: 395 LLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L + G +  +E+   +  FV   G+  N  + +ALIS Y+K   +  + +IF  M  R+
Sbjct: 225 VLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRD 284

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
            ITWN  I+ +  NG   + +  F  +  + + P++ TL+  LS+CA I +L  GKQ+  
Sbjct: 285 FITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDE 344

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           Y     L   + +  A+I +YAKCG L+ + RVFN M  K+  SWNA+ISA A HG+ KE
Sbjct: 345 YATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKE 404

Query: 572 AVSCFKAMQDV-GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           A+S F+ M D  G  +P+  TF ++LSAC HAGLVD+G R+FD M   +G +P  +H SC
Sbjct: 405 ALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSC 464

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLL RAG+L EA  VI     +  +    AL SAC    N+ +G  +  +LLE +   
Sbjct: 465 MVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSN 524

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              Y++ S IY    +W++AA +R L++  GV K PGCSWI
Sbjct: 525 SGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWI 565



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 198/442 (44%), Gaps = 46/442 (10%)

Query: 24  LNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
            NI L   + + H Y   LHL+ Q+ + + + P+ ++      ACANL         H  
Sbjct: 84  FNIMLRATTTTWHDYPLTLHLYHQMKTLN-ISPNNFTFPFVFLACANLEEIRMARLAHCE 142

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
             + GL    H  N+++++Y    +    ++VF EI   D+ SW + LS   K+G    A
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREA 202

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            EVF ++ +              E+G+E                 D  S  SVL  C + 
Sbjct: 203 VEVFGRLRE--------------ESGFEP----------------DEMSLVSVLGACGEL 232

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G LE GR +   V + G      + +ALI+MY  CG +V + ++F+       D I++N 
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR--DFITWNA 290

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
            +   A  G  +EA+  F  M    + P+++T  +V+SAC       +G Q+   A   G
Sbjct: 291 AISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG 350

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    V+ A I MY+ CG ++ A  +F  +  K+  SWN MIS  A     + A+  + 
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410

Query: 379 EMQSVG--IRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
            M   G   RP++ TF SLL++   +G + E   +      + G++  I+  + ++   +
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLS 470

Query: 433 KNERIKQAYQIFHNM--SPRNI 452
           +   + +A+ +   M   P N+
Sbjct: 471 RAGHLYEAWDVIEKMPEKPDNV 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 49/329 (14%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+  ++ G  ++A+ +F ++      +PD  SL + L AC  L +   G  + 
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVE 242

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +  G+K   ++ + ++S+Y    +LVS +R+F  + + D  +W   +SA        
Sbjct: 243 GFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA-------- 294

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA                       +NG  D  I LF  M +  V  +  +  +VLS C 
Sbjct: 295 YA-----------------------QNGMADEAISLFHSMKENGVDPNKVTLTAVLSACA 331

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G L+ G+Q+    T  G    + V  ALI MY  CG++  A +VF +      +  S+
Sbjct: 332 SIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK--NDASW 389

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
           N M+  LAS G+ +EAL  F  M     S RP+++TFVS++SAC        VHA  +  
Sbjct: 390 NAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC--------VHAGLVDE 441

Query: 318 GFEAYTSVSNAAITMYSSCGKIDE-ACMI 345
           G+  +  +S    T++    KI+  +CM+
Sbjct: 442 GYRLFDMMS----TLFGLVPKIEHYSCMV 466



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 156/374 (41%), Gaps = 56/374 (14%)

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
           F   SLL      + ++ IH    I+    +I   N L+S     +    +  IF +++P
Sbjct: 22  FLLLSLLKQCPSTKTLQQIHTQFTIH----SIHKPNHLLSQSISLKDFTYSTLIFSHITP 77

Query: 450 R-NIITWNTLINGFLL--NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
             N   +N ++       + +P+  L  + ++    + P+ +T      +CA +  +R  
Sbjct: 78  HPNDYAFNIMLRATTTTWHDYPLT-LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +  H  V K  L +     N+M+T+Y +CG+   + +VF+ + EKD +SWN+L+S YA+ 
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG------------------ 608
           G  +EAV  F  +++    +PD+ +  +VL AC   G ++ G                  
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256

Query: 609 -----------------TRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVIN 649
                             RIFD M       P+ D ++    +    + G  DEA  + +
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGM-------PSRDFITWNAAISAYAQNGMADEAISLFH 309

Query: 650 SQHIQARSDN---WWALFSACAAHGNLRLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAG 705
           S        N     A+ SACA+ G L LG+ +      R  Q    V   L ++YA  G
Sbjct: 310 SMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCG 369

Query: 706 LWEEAANIRELLKR 719
             E A  +   + R
Sbjct: 370 SLESAQRVFNDMPR 383


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  312 bits (799), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 195/583 (33%), Positives = 299/583 (51%), Gaps = 53/583 (9%)

Query: 194 SVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC-----GNVVDACKVFEE 248
           ++LS C    L+  +Q+HS + K+G       ++ LI     C     G++  A  +F+ 
Sbjct: 33  TLLSNCKT--LQTLKQIHSQIIKTGLHNTHFALSKLIEF---CAVSPHGDLSYALSLFKT 87

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
            +    +H+ +N M+ GL+S      AL  +  M+ +   P+E TF S+  +C   R   
Sbjct: 88  IRN--PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAH 145

Query: 306 VGYQVHAQAMKSGFE----AYTSVSN---------------------------AAITMYS 334
            G QVHA  +K G E     +TS+ N                           A IT Y+
Sbjct: 146 EGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYA 205

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
           S G +DEA  +F  +  +D+VSWN MIS YAQ      A+  + EM+   + P+  T  S
Sbjct: 206 SKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLS 265

Query: 395 LLA----SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           +L+    S   +++   + +++   G+ +NI++ N LI  Y K   +++A  +F  +  +
Sbjct: 266 VLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK 325

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N+++WN +I G+       + L  F  ++ S + P++ T    L +CA + +L  GK +H
Sbjct: 326 NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVH 385

Query: 511 GYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
            YV KN  ++ + ++L  ++I +YAKCGDL  + R+F+ M  K   +WNA+IS +A HG 
Sbjct: 386 AYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGH 445

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
              A+  F  M   G + PD  TF  VL+AC HAGL+  G R F SM+ DY   P   H 
Sbjct: 446 TDTALGLFSRMTSEGFV-PDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHY 504

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
            CM+DL GRAG  DEAE ++ +  ++     W +L  AC  H  + L   +A  L E E 
Sbjct: 505 GCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEP 564

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + PS YVLLSNIYA AG WE+ A IR  L    + K PGCS I
Sbjct: 565 ENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSI 607



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 197/370 (53%), Gaps = 18/370 (4%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  +V + SS   +P+ Y+  +   +C  +R A  G Q+HA+ L+ GL+    V  +++
Sbjct: 112 ALEYYVHMISS-GTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLI 170

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y    +LV+ + VF +    D  S+T  ++     G +D A E+FD++P RD+  +NA
Sbjct: 171 NMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNA 230

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKS 217
           MI+G  ++G  +  +  F EM +  V  +  +  SVLS C      L+ G  + S +   
Sbjct: 231 MISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDR 290

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G    + +VN LI MY  CG++ +A  +FE+ +    + +S+NVM+ G   +   +EAL 
Sbjct: 291 GLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDK--NVVSWNVMIGGYTHMSCYKEALG 348

Query: 278 RFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHA------QAMKSGFEAYTSVSNA 328
            FR M+ +++ P+++TF+S++ AC       +G  VHA      ++MK+    +TS+   
Sbjct: 349 LFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSL--- 405

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MY+ CG +  A  IF  +  K + +WN MIS +A      +A+  +  M S G  PD
Sbjct: 406 -IDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPD 464

Query: 389 EFTFGSLLAS 398
           + TF  +L +
Sbjct: 465 DITFVGVLTA 474



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/562 (27%), Positives = 267/562 (47%), Gaps = 53/562 (9%)

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------ACTKMGHVDYACEVFDKMPDR 152
           L+L  N + L ++K++ S+I    +++    LS      A +  G + YA  +F  + + 
Sbjct: 32  LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA--GLLEFGRQL 210
           +  ++N MI G + +    + +  +  M       + Y+F S+   C    G  E G+Q+
Sbjct: 92  NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHE-GKQV 150

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-----------------AKGY- 252
           H+ V K G      V  +LI MY   G +V+A  VF++                 +KG+ 
Sbjct: 151 HAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFL 210

Query: 253 -----------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                      V D +S+N M+ G A  GRVEEA+  F +M  A + P+  T +SV+SAC
Sbjct: 211 DEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSAC 270

Query: 302 LCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
                  ++G  V +     G  +   + N  I MY  CG ++EA  +F ++Q+K++VSW
Sbjct: 271 AQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSW 330

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFI 414
           N MI  Y   +  + A+  +  M    I P++ TF S+L   A+ G +++ + +HA+V  
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDK 390

Query: 415 N--GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           N   +   + +  +LI  YAK   +  A +IF  M+ +++ TWN +I+GF ++G     L
Sbjct: 391 NMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTAL 450

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITL 531
             FS +      PD+ T    L++C     L  G++    ++++  +S K+     MI L
Sbjct: 451 GLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDL 510

Query: 532 YAKCGDLD-CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           + + G  D     V NM ++ D   W +L+ A   H   + A S  K + +   ++P+  
Sbjct: 511 FGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFE---LEPENP 567

Query: 591 TFTAVLSAC-SHAGLVDDGTRI 611
           +   +LS   + AG  +D  +I
Sbjct: 568 SAYVLLSNIYAGAGRWEDVAKI 589



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 135/335 (40%), Gaps = 78/335 (23%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +   +    Y++AL LF ++  S+ + P+  +  + L ACANL     G  +HAY  
Sbjct: 331 NVMIGGYTHMSCYKEALGLFRRMMQSN-IDPNDVTFLSILPACANLGALDLGKWVHAYV- 388

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
                                +++ S+K          V  WT+ +    K G +  A  
Sbjct: 389 --------------------DKNMKSMKNT--------VALWTSLIDMYAKCGDLAVAKR 420

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           +FD M  + L  +NAMI+G   +G+ D  +GLF  M       D+ +F  VL+ C  AGL
Sbjct: 421 IFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGL 480

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  GR+                       YF+  +++   KV  +   Y C       M+
Sbjct: 481 LSLGRR-----------------------YFS--SMIQDYKVSPKLPHYGC-------MI 508

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFE--- 320
           D     G  +EA    ++M    ++P    + S++ AC   R   ++     K  FE   
Sbjct: 509 DLFGRAGLFDEAETLVKNM---EMKPDGAIWCSLLGACRIHR-RIELAESVAKHLFELEP 564

Query: 321 ----AYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
               AY  +SN    +Y+  G+ ++   I  RL +
Sbjct: 565 ENPSAYVLLSN----IYAGAGRWEDVAKIRTRLND 595


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  311 bits (798), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 201/583 (34%), Positives = 310/583 (53%), Gaps = 45/583 (7%)

Query: 190 YSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +SF   L  C A   L  G+ LH+L  KS       + N  + +Y  C  +  A +VF+ 
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 249 A-----------------KGYV------------CDHISYNVMMDGLASVGRVEEALIRF 279
                             + YV             D +SYN ++   A  G  + A   F
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 280 RDMLVASLRPSELTFVSVMSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
            +M  A L     T   +++AC    VG   Q+HA ++ +G ++Y SV NA IT YS  G
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGI-NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNG 187

Query: 338 KIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
            + EA  IF  L E +D VSWN+M+  Y Q   G  A+  YLEM   G+  D FT  S+L
Sbjct: 188 FLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVL 247

Query: 397 ASSGFIEMVEMI-----HAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPR 450
             + F  + +++     HA +  +G   N  V + LI  Y+K    +    ++F  +S  
Sbjct: 248 --TAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 451 NIITWNTLINGF-LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++ WNT+I+G+ L      + L+ F +L     RPD+ +L   +S+C+ +SS   G+Q+
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 510 HGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           HG  LK ++ S ++S+ NA+I +Y+KCG+L  +  +F+ M E +T+S+N++I+ YAQHG 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
           G +++  F+ M ++    P   TF +VL+AC+H G V+DG   F+ M   +G  P   H 
Sbjct: 426 GFQSLHLFQRMLEMD-FTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHF 484

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           SCM+DLLGRAG L EAER+I +         W AL  AC  HGN+ L    A  LL+ + 
Sbjct: 485 SCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDP 544

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              + YV+L+NIY+  G  ++AA++R+L++  GV K+PGCSWI
Sbjct: 545 LNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWI 587



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 162/581 (27%), Positives = 274/581 (47%), Gaps = 33/581 (5%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H     ++S    L  C   R+   G  LHA  +++ +    +++N  L LY   R L +
Sbjct: 2   HHFSSLLHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSA 61

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
            +RVF    + +V+S+ T +SA  K  +V+ A ++FD+MP  D   YN +I      G  
Sbjct: 62  ARRVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDT 121

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
                LF EM +  +  D ++ + +++ C  + GL+   RQLH+L   +G    VSV NA
Sbjct: 122 QPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNA 178

Query: 229 LITMYFNCGNVVDACKVFE---EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           LIT Y   G + +A ++F    E +    D +S+N M+          +AL  + +M V 
Sbjct: 179 LITSYSKNGFLKEARRIFHWLSEDR----DEVSWNSMVVAYMQHREGSKALELYLEMTVR 234

Query: 286 SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            L     T  SV++A    +    G Q HA+ +KSG+   + V +  I +YS CG     
Sbjct: 235 GLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLD 294

Query: 343 C-MIFARLQEKDIVSWNTMISTYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
           C  +F  +   D+V WNTMIS Y+   +L   A+  + ++Q VG RPD+ +   ++++  
Sbjct: 295 CRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACS 354

Query: 401 FI---EMVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            +        +H       I +N I V+NALI+ Y+K   ++ A  +F  M   N +++N
Sbjct: 355 NMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYN 414

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++I G+  +G   Q L  F  +L  +  P   T    L++CA    +  GK I+  ++K 
Sbjct: 415 SMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGK-IYFNMMKQ 473

Query: 517 NLISKMSLGN--AMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAV 573
               +   G+   MI L  + G L  + R+   +  +     W+AL+ A   HG  + A+
Sbjct: 474 KFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAI 533

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
              KA   + ++ P  A    +L     A +  D  R+ D+
Sbjct: 534 ---KAANRLLQLDPLNAAPYVML-----ANIYSDNGRLQDA 566


>gi|302793632|ref|XP_002978581.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
 gi|300153930|gb|EFJ20567.1| hypothetical protein SELMODRAFT_109016 [Selaginella moellendorffii]
          Length = 785

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 184/598 (30%), Positives = 331/598 (55%), Gaps = 18/598 (3%)

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
           S ++ P   +  T    C   G ++ A  +F  M +RD+  +NA+IT   ++G+ +  + 
Sbjct: 192 SAMETPLCNALITMYGRC---GRLEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVL 248

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           L++ M +   + D  +F ++L++ +    L E  + +HS + +SG S  +++  AL+ MY
Sbjct: 249 LYQLMLQEGCKPDKVTFVALLTMSNGPEALTEV-KLVHSHIVESGVSINIALGTALVAMY 307

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C ++ D   +FE+      + IS+NVM+   A  G   +A+     M +  ++P  +T
Sbjct: 308 SKCESLEDTRWLFEKMPQR--NVISWNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVT 365

Query: 294 FVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            V +++ C      ++G +VH    +   EA   + N+ + MY  CG++++A M+F  + 
Sbjct: 366 CVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAEMVFDGIL 425

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---M 407
           +++++SW  M++ Y+++N    A+L +  +   G++P   TF   L +    E ++   +
Sbjct: 426 QRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAEALDKGRL 485

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
           +H+    +G   ++ + +AL++ Y +   I+ A   F +   R N +TW+ +I  F+ +G
Sbjct: 486 VHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMIAAFVQHG 545

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM-SLG 525
              +GLQH   +    L     T +  LS+C+ ++ LR GK+IH YV +    ++  ++ 
Sbjct: 546 QDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLREGKRIHSYVRERRFDTEAATVT 605

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           N+++T+Y KCG LDC+  VF     +DTI WNA+IS YAQH + ++AV  F  MQ  G +
Sbjct: 606 NSLVTMYGKCGSLDCAREVFETSRRQDTICWNAIISGYAQHSQTRDAVELFHRMQQEG-V 664

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            PD  TF  +LS CSH GL+D+G   + SMV + G  P +D+ +C++DLLGRAG L EAE
Sbjct: 665 APDPVTFVCILSVCSHGGLLDEGVYAYASMV-ELGLEPTQDNYACVIDLLGRAGKLQEAE 723

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
             I S   +   +   +L S+C +HG+++ GR  A  ++E +    S +V+LS+IY+A
Sbjct: 724 EFIQSLGTRPAIETLTSLLSSCKSHGDVQRGRRAAEGIMEMDPRSSSAHVVLSSIYSA 781



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 177/698 (25%), Positives = 319/698 (45%), Gaps = 63/698 (9%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L AC  ++      +LH+  +RA L     + N ++  Y     L      F  +   +V
Sbjct: 2   LQACPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNV 61

Query: 124 YSWTTFLSACTK-----------------------------------MGHVDYACEVFDK 148
           Y+WT  +  C +                                    G VD A  VFD 
Sbjct: 62  YTWTAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNITLLAALTMYGSCGSVDDAKRVFDA 121

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG-LLEFG 207
           MP R++  + AMI        E     +FR M     + +  ++ +++  C     LE G
Sbjct: 122 MPARNVITWTAMIGAHAVTSLEQ-AFKVFRLMELEGFKSNFVTYVTLVQACSKPEFLEVG 180

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
             LH    +S  +    + NALITMY  CG + DA  +F        D I++N ++    
Sbjct: 181 IILHMRSVESSSAMETPLCNALITMYGRCGRLEDARAIFSSMVER--DIIAWNALITEYG 238

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTS 324
             G VEEA++ ++ ML    +P ++TFV++++    P    +   VH+  ++SG     +
Sbjct: 239 QHGHVEEAVLLYQLMLQEGCKPDKVTFVALLTMSNGPEALTEVKLVHSHIVESGVSINIA 298

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           +  A + MYS C  +++   +F ++ +++++SWN M++ YA+  LGR A+     MQ  G
Sbjct: 299 LGTALVAMYSKCESLEDTRWLFEKMPQRNVISWNVMVTAYAKHGLGRKAVQITEYMQLDG 358

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           ++PD  T   LL     S  +++   +H ++       ++ + N+L++ Y +   ++QA 
Sbjct: 359 VKPDNVTCVGLLNVCTGSADLKLGRKVHGWIAEGRCEADLILWNSLLNMYGRCGEVEQAE 418

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            +F  +  RN+I+W  ++  +         L  F  + +S ++P   T   AL +C    
Sbjct: 419 MVFDGILQRNVISWTAMLTAYSRQNRQDMALLLFHAIHLSGVKPTCITFLEALDACVGAE 478

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALI 560
           +L  G+ +H   +++     +SLG+A++ +Y +CG +  +   F +  + K+ ++W+A+I
Sbjct: 479 ALDKGRLVHSCAVQSGNDIDVSLGSALVAMYGRCGSIRDAKACFDDTEVRKNHVTWSAMI 538

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           +A+ QHG+ +E +   + MQ  G +    ATF + LSACS+   + +G RI  S V +  
Sbjct: 539 AAFVQHGQDREGLQHLRFMQQQG-LDMSPATFASTLSACSNLADLREGKRIH-SYVRERR 596

Query: 621 F-IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHGNLRLGR 677
           F   A    + ++ + G+ G LD A  V  +     R D   W A+ S  A H   R   
Sbjct: 597 FDTEAATVTNSLVTMYGKCGSLDCAREVFETSR---RQDTICWNAIISGYAQHSQTR--- 650

Query: 678 IIAGLLLEREQDK-----PSVYVLLSNIYAAAGLWEEA 710
             A  L  R Q +     P  +V + ++ +  GL +E 
Sbjct: 651 -DAVELFHRMQQEGVAPDPVTFVCILSVCSHGGLLDEG 687



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 206/467 (44%), Gaps = 78/467 (16%)

Query: 303 CPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           CP+V       ++H+Q +++  +    + N  I  Y  C  +D+A   F R+  K++ +W
Sbjct: 5   CPKVKALDVARRLHSQIVRASLDNRVFLGNHLIHTYGKCHSLDDAWETFERMSYKNVYTW 64

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
             +I   AQ +    AI+   +M   G++PD  T   LLA+                   
Sbjct: 65  TAIIGVCAQHHCHSLAIILLRQMLLEGVKPDNIT---LLAA------------------- 102

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
                     ++ Y     +  A ++F  M  RN+ITW  +I    +     Q  + F  
Sbjct: 103 ----------LTMYGSCGSVDDAKRVFDAMPARNVITWTAMIGAHAVTSLE-QAFKVFRL 151

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           + +   + +  T    + +C++   L  G  +H   ++++   +  L NA+IT+Y +CG 
Sbjct: 152 MELEGFKSNFVTYVTLVQACSKPEFLEVGIILHMRSVESSSAMETPLCNALITMYGRCGR 211

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L+ +  +F+ M+E+D I+WNALI+ Y QHG  +EAV  ++ M   G  KPD+ TF A+L+
Sbjct: 212 LEDARAIFSSMVERDIIAWNALITEYGQHGHVEEAVLLYQLMLQEG-CKPDKVTFVALLT 270

Query: 598 ACS-----------HAGLVDDGTRI--------------FDSMVND---YGFIPAEDHLS 629
             +           H+ +V+ G  I               +S+ +    +  +P  + +S
Sbjct: 271 MSNGPEALTEVKLVHSHIVESGVSINIALGTALVAMYSKCESLEDTRWLFEKMPQRNVIS 330

Query: 630 --CMLDLLGRAGYLDEAERVINSQHIQA-RSDN--WWALFSACAAHGNLRLGRIIAGLLL 684
              M+    + G   +A ++     +   + DN     L + C    +L+LGR + G + 
Sbjct: 331 WNVMVTAYAKHGLGRKAVQITEYMQLDGVKPDNVTCVGLLNVCTGSADLKLGRKVHGWIA 390

Query: 685 E-REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           E R +    ++  L N+Y   G  E+A  + +     G++++   SW
Sbjct: 391 EGRCEADLILWNSLLNMYGRCGEVEQAEMVFD-----GILQRNVISW 432



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 152/375 (40%), Gaps = 70/375 (18%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L   SR      AL LF  IH S  +KP   +    L AC        G  +H+ A+++G
Sbjct: 436 LTAYSRQNRQDMALLLFHAIHLS-GVKPTCITFLEALDACVGAEALDKGRLVHSCAVQSG 494

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + + ++++Y     +   K  F + +               +  HV        
Sbjct: 495 NDIDVSLGSALVAMYGRCGSIRDAKACFDDTE--------------VRKNHV-------- 532

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
                    ++AMI    ++G +  G+   R M +  +     +FAS LS C +   L  
Sbjct: 533 --------TWSAMIAAFVQHGQDREGLQHLRFMQQQGLDMSPATFASTLSACSNLADLRE 584

Query: 207 GRQLHSLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           G+++HS V +  F     +V N+L+TMY  CG++  A +VFE ++    D I +N ++ G
Sbjct: 585 GKRIHSYVRERRFDTEAATVTNSLVTMYGKCGSLDCAREVFETSRRQ--DTICWNAIISG 642

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            A   +  +A+  F  M    + P  +TFV ++S C         H   +  G  AY S+
Sbjct: 643 YAQHSQTRDAVELFHRMQQEGVAPDPVTFVCILSVC--------SHGGLLDEGVYAYASM 694

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSV 383
               +         + AC+I       D+              LGR+  L   E  +QS+
Sbjct: 695 VELGLEPTQD----NYACVI-------DL--------------LGRAGKLQEAEEFIQSL 729

Query: 384 GIRPDEFTFGSLLAS 398
           G RP   T  SLL+S
Sbjct: 730 GTRPAIETLTSLLSS 744


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 225/709 (31%), Positives = 340/709 (47%), Gaps = 58/709 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A HL  +I       P + S      A       A    LH  A+ +GL A+  V N++ 
Sbjct: 20  AHHLLDRIPRPTSTLPLLASSPAAFTAAVPSSVPANLPALHGLAIASGLDAFSFVTNSLA 79

Query: 100 SLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           + Y K+A    S  +VF   +  DV S+ T LSA                +PDR      
Sbjct: 80  ARYAKSASSFPSAAKVFHTARARDVSSYNTILSA----------------LPDRG----- 118

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLV 214
                      E +    +  +   DVR D  +    LS+     +A  +   RQLH+L 
Sbjct: 119 -----------EALAFAAWM-LRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALA 166

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE- 273
           ++SG    V V NAL+T Y     +  A +VF+E      D +S+N M+ GLA  G    
Sbjct: 167 SRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPAR--DLVSWNAMICGLAQDGDCPT 224

Query: 274 EALIRFRDMLV---ASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
           E ++ F  +L    A++RP  ++  SV+ AC       +G QVH+  +K G E   S+ N
Sbjct: 225 EVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGN 284

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             + MY   G    A  +   + E+D++SW T IS   + +    AI  +  M+  G+ P
Sbjct: 285 VLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMDGEED----AIELFNGMRQDGVPP 340

Query: 388 DEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           +E TF +L   LA+       +MIH      G+      +N+LI+ YAK  R+  A  +F
Sbjct: 341 NEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVF 400

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--S 502
             M    II WN LI+G+  N    + LQ FS  ++  LRP+E T +  LS+   +   S
Sbjct: 401 DRMPRPEIIAWNALISGYAQNELCNEALQVFS-CMVRCLRPNETTFASVLSAVTAVETVS 459

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           + +G+  H   LK  L     +  A+I +YAK G L+ S + F++ + +  I+W A+ISA
Sbjct: 460 MAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLIAWTAIISA 519

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           +A+HG     ++ F  M   G + PD     +VL+AC H+G V+ G  IFDSM  ++   
Sbjct: 520 HAKHGNYDTVMNLFDDMVCSG-VAPDGVVLLSVLTACRHSGAVNTGREIFDSMPAEHHVE 578

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H +C++D+LGRAG L+EAE ++             +L  AC  HGN  +   +AG+
Sbjct: 579 PWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLGACRIHGNTSIAERVAGI 638

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L E E  +   YVLLSNIYA  G W   A +R  ++  GV K+ G SW+
Sbjct: 639 LTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWV 687



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/490 (29%), Positives = 232/490 (47%), Gaps = 60/490 (12%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG----NQLHAYALRAGLKAYPHV 94
           +AL     +  S  ++PD  +L+  L+  A+ R  A G     QLHA A R+GL A   V
Sbjct: 119 EALAFAAWMLRSGDVRPDAVTLTVALSLAAS-RGEADGVWIVRQLHALASRSGLVADVFV 177

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N +++ Y     L + +RVF E                               MP RDL
Sbjct: 178 GNALVTAYSRGALLGAARRVFDE-------------------------------MPARDL 206

Query: 155 PVYNAMITGCTENG--YEDIGIGLFREMHK--LDVRRDNYSFASVLSVCDA-GLLEFGRQ 209
             +NAMI G  ++G    ++ +   R +      VR D  S  SV+  C + G +E GRQ
Sbjct: 207 VSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQ 266

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN--VMMDGLA 267
           +HS   K G    VS+ N L+ MY+  G    A K+ +       D IS+   + MDG  
Sbjct: 267 VHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDER--DVISWTTAISMDG-- 322

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--CP-RVGYQVHAQAMKSGFEAYTS 324
                E+A+  F  M    + P+E+TFV++MSA    CP R G  +H   +K+G     +
Sbjct: 323 ----EEDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAA 378

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
            +N+ ITMY+   ++D+A  +F R+   +I++WN +IS YAQ  L   A+  +  M    
Sbjct: 379 AANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCMVRC- 437

Query: 385 IRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           +RP+E TF S+L++   +E V     EM H      G+  +  VS ALI  YAK   +++
Sbjct: 438 LRPNETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEE 497

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           + + F     R++I W  +I+    +G     +  F +++ S + PD   L   L++C  
Sbjct: 498 SRKAFDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRH 557

Query: 500 ISSLRHGKQI 509
             ++  G++I
Sbjct: 558 SGAVNTGREI 567


>gi|224079788|ref|XP_002305943.1| predicted protein [Populus trichocarpa]
 gi|222848907|gb|EEE86454.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 194/701 (27%), Positives = 353/701 (50%), Gaps = 43/701 (6%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +++AL +F ++  S    P+ ++ S+ L AC+ L   + G  +H   ++ G ++   + +
Sbjct: 22  HEEALGMFQEMMGSGPC-PNEFTFSSVLRACSALGEFSDGKCIHGCVIKHGFESNQILGS 80

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++ LY                               +K G ++ AC +F  + + D+  
Sbjct: 81  VLIDLY-------------------------------SKYGSIEEACRLFSCVENGDVVS 109

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTK 216
           +  MI+   + G     + ++ +M K  V  + ++F  VL+      L+ G+ +H+ +  
Sbjct: 110 WTTMISSLVQAGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIV 169

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G    + V  AL+ MY  C  + DA ++ +       D   +  ++ GLA   ++ EA+
Sbjct: 170 FGVELNLVVKTALVHMYSKCQRMDDAVRISKLTPE--SDRFLWTAILSGLAQNLKLREAV 227

Query: 277 IRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           + F++M  + +  +  T++S+++AC   L   +G Q+HA+ + +G E    V NA + MY
Sbjct: 228 VAFQEMEASGILSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMY 287

Query: 334 SSCG-KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
             C  ++++   +F  ++  D++SW ++I+  ++    + +  +Y+EM + G++P+  T 
Sbjct: 288 MKCSHEVEDGLRVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTL 347

Query: 393 GSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
             +L S   +     +  +H  V       +I VSNAL+ AYA NER+  A+ +  NMS 
Sbjct: 348 SIILRSCRAAKSASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQ 407

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R+ +T+  L       G     L   + +   +++ D Y+++  LS+ A ++S+  G Q+
Sbjct: 408 RDALTYTGLATRLNQMGHHEMALHVINHMFNDDIKMDGYSMAGFLSASAGLNSVETGMQL 467

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H Y +K+ L S +S+ N +++ Y KCG    + R F  + E D +SWN LIS  A +G  
Sbjct: 468 HSYSVKSGLGSSISVSNGLVSFYGKCGLTRDAERAFAEIREPDIVSWNGLISVLASYGHI 527

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
             A+S F  M+  G +KPD  TF  VL  C+H GLVD G   F+SM   +G  P  DH  
Sbjct: 528 SSALSAFDDMRLTG-VKPDSVTFLLVLFTCTHCGLVDMGLEYFNSMKEMHGIEPQLDHYV 586

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
           C+ DLLGRAG L+EA  ++ +  I+  +  +  L +AC  H  + LG  IA   L+ +  
Sbjct: 587 CLFDLLGRAGRLEEAMEILETMPIRPNASIYKTLLAACKVHRIVPLGEDIASRGLKLDPS 646

Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            P+  ++L+N+Y ++G  + AA IR  ++  G    P  SW
Sbjct: 647 DPAFNLMLANLYDSSGRPDLAATIRRSVRDKGS-SLPQRSW 686



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 263/532 (49%), Gaps = 12/532 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFG 207
           MP RD+  +  +++   ++   +  +G+F+EM       + ++F+SVL  C A G    G
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H  V K GF     + + LI +Y   G++ +AC++F   +    D +S+  M+  L 
Sbjct: 61  KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVEN--GDVVSWTTMISSLV 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRVGYQVHAQAMKSGFEAYTSV 325
             G+  +AL  + DM+ A + P+E TFV V++A   L  + G  VHA  +  G E    V
Sbjct: 119 QAGKWSQALRIYIDMIKAGVYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIVFGVELNLVV 178

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             A + MYS C ++D+A  I     E D   W  ++S  AQ    R A++A+ EM++ GI
Sbjct: 179 KTALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGI 238

Query: 386 RPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAK-NERIKQAY 441
             + FT+ S+L +   I   ++   IHA V + G+  +I V NAL+  Y K +  ++   
Sbjct: 239 LSNNFTYLSILNACSLILSLDLGRQIHARVIMAGLEDDIPVGNALVDMYMKCSHEVEDGL 298

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  +   ++I+W +LI G   +GF       + E+  S L+P+  TLS+ L SC    
Sbjct: 299 RVFEGIESPDVISWTSLIAGLSEHGFHQGSFDSYMEMTASGLQPNSVTLSIILRSCRAAK 358

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           S     ++HG+V+K N    +++ NA++  YA    +D +  +   M ++D +++  L +
Sbjct: 359 SASQLLKLHGHVIKTNADHDIAVSNALVDAYAGNERVDDAWHLIRNMSQRDALTYTGLAT 418

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
              Q G  + A+     M +   IK D  +    LSA +    V+ G ++    V   G 
Sbjct: 419 RLNQMGHHEMALHVINHMFN-DDIKMDGYSMAGFLSASAGLNSVETGMQLHSYSVKS-GL 476

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
             +    + ++   G+ G   +AER   ++  +    +W  L S  A++G++
Sbjct: 477 GSSISVSNGLVSFYGKCGLTRDAERAF-AEIREPDIVSWNGLISVLASYGHI 527



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 43/283 (15%)

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  R++++W  +++ ++ +    + L  F E++ S   P+E+T S  L +C+ +     G
Sbjct: 1   MPSRDVVSWTGILSAYVKHEKHEEALGMFQEMMGSGPCPNEFTFSSVLRACSALGEFSDG 60

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           K IHG V+K+   S   LG+ +I LY+K G ++ + R+F+ +   D +SW  +IS+  Q 
Sbjct: 61  KCIHGCVIKHGFESNQILGSVLIDLYSKYGSIEEACRLFSCVENGDVVSWTTMISSLVQA 120

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS----------HAGLVDDGTRI----- 611
           G+  +A+  +  M   G + P++ TF  VL+A            HA L+  G  +     
Sbjct: 121 GKWSQALRIYIDMIKAG-VYPNEFTFVKVLAAAGFLGLKHGKVVHAHLIVFGVELNLVVK 179

Query: 612 ------------FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR--- 656
                        D  V      P  D       L G A  L   E V+  Q ++A    
Sbjct: 180 TALVHMYSKCQRMDDAVRISKLTPESDRFLWTAILSGLAQNLKLREAVVAFQEMEASGIL 239

Query: 657 SDN--WWALFSACAAHGNLRLGR------IIAGLLLEREQDKP 691
           S+N  + ++ +AC+   +L LGR      I+AGL    E D P
Sbjct: 240 SNNFTYLSILNACSLILSLDLGRQIHARVIMAGL----EDDIP 278


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 205/710 (28%), Positives = 356/710 (50%), Gaps = 79/710 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  + AL  FV++   + L PD + +     AC  L+ + FG  +H Y  +AGL    
Sbjct: 145 RIGLVEGALMGFVEM-LENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCV 203

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            VA+++  +Y     L   ++VF EI                               PDR
Sbjct: 204 FVASSLADMYGKCGLLDDARKVFDEI-------------------------------PDR 232

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
            +  +NA++ G  +NG     I L   M    +     + ++ LS   + G +E G+Q H
Sbjct: 233 TVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSH 292

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++   +G      +  +++  Y   G +  A  +F+  +    D +++N+++ G    G 
Sbjct: 293 AIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFD--RMIEKDVVTWNLLISGYVQQGL 350

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNA 328
           VE+A+   + M   +L    +T  S+MSA       ++G +V    ++ GF +   +++ 
Sbjct: 351 VEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLAST 410

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           A+ MY+ CG I +A  +F    EKD++ WNT+++ YA+  L   A+  + EMQ  G+ P+
Sbjct: 411 AVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPN 470

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM- 447
             T+                                N++I +  +N ++ +A  +F  M 
Sbjct: 471 VITW--------------------------------NSVILSLLRNGQVNEAKDMFLQMQ 498

Query: 448 ----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
               SP N+I+W T++NG + NG   + + +  ++  S LR + ++++VALS+CA ++SL
Sbjct: 499 SSGISP-NLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASL 557

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
             G+ IHGY+++N +  S +S+  +++ +YAKCGD+  + RVF   +  +   +NA+ISA
Sbjct: 558 HFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISA 617

Query: 563 YAQHGEGKEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           YA +G  KEA + ++++ +DVG I+PD  T T VLSAC HAG ++    IF  MV+ +  
Sbjct: 618 YALYGNVKEATALYRSLDEDVG-IEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAM 676

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H   M+DLL  AG  ++A R+I     +  +    +L ++C       L   ++ 
Sbjct: 677 KPCLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSR 736

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE E +    YV +SN+YA  G W+E   +RE++K  G+ K+PGCSWI
Sbjct: 737 HLLESEPENSGNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGCSWI 786



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 159/657 (24%), Positives = 297/657 (45%), Gaps = 78/657 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L + G  ++AL L  ++ S + ++ P+IY     L  C   R+ + G Q+HA  L+ 
Sbjct: 37  VSSLCKKGEIREALGLVTEMGSRNVRIGPEIYG--EILQGCVYERDLSTGQQIHARILKN 94

Query: 87  G--LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G       ++   ++  Y     L   + +FS+++  +V+SW   +    ++G V+ A  
Sbjct: 95  GDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVEGALM 154

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F +M                EN       GLF          DN+   +V   C A   
Sbjct: 155 GFVEM---------------LEN-------GLF---------PDNFVVPNVCKACGALQW 183

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+E        +++N +M
Sbjct: 184 SRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTV--VAWNALM 241

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G    G  +EA+     M    + P+ +T  + +SA         G Q HA A+ +G E
Sbjct: 242 VGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLE 301

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G I+ A MIF R+ EKD+V+WN +IS Y Q+ L   AI     M
Sbjct: 302 LDNILGTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLM 361

Query: 381 QSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           +   +  D  T  SL++++     +++ + +  +   +G +++I +++  +  YAK   I
Sbjct: 362 RRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSI 421

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F++   +++I WNTL+  +   G   + L+ F E+ +  + P+  T +  + S 
Sbjct: 422 VDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSL 481

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            R   +   K                               D  L++ +  I  + ISW 
Sbjct: 482 LRNGQVNEAK-------------------------------DMFLQMQSSGISPNLISWT 510

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +++   Q+G  +EA+   + MQ+ G ++ +  + T  LSAC++   +  G  I   ++ 
Sbjct: 511 TMMNGLVQNGCSEEAIVYLRKMQESG-LRLNVFSITVALSACANLASLHFGRSIHGYIIR 569

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           +     +    + ++D+  + G + +AERV  S+ + +    + A+ SA A +GN++
Sbjct: 570 NQHHSSSVSIETSLVDMYAKCGDISKAERVFGSK-LYSELPLYNAMISAYALYGNVK 625



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 206/423 (48%), Gaps = 11/423 (2%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQ 313
           ISY   +  L   G + EAL    +M   ++R     +  ++  C+  R    G Q+HA+
Sbjct: 31  ISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHAR 90

Query: 314 AMKSG--FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            +K+G  +     +    +  Y+ C  ++ A ++F++L+ +++ SW  +I    +  L  
Sbjct: 91  ILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVE 150

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
            A++ ++EM   G+ PD F   ++  + G ++       +H +V   G+   + V+++L 
Sbjct: 151 GALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLA 210

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K   +  A ++F  +  R ++ WN L+ G++ NG   + ++  S +    + P   
Sbjct: 211 DMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRV 270

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T+S  LS+ A +  +  GKQ H   + N L     LG +++  Y K G ++ +  +F+ M
Sbjct: 271 TVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRM 330

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
           IEKD ++WN LIS Y Q G  ++A+   + M+  G +  D  T ++++SA +    +  G
Sbjct: 331 IEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRR-GNLNFDCVTLSSLMSAAARTHNLKLG 389

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
             +    +  +GF+      S  +++  + G + +A++V NS  ++     W  L +A A
Sbjct: 390 KEVQCYCIR-HGFVSDIVLASTAVEMYAKCGSIVDAKKVFNST-VEKDLILWNTLLAAYA 447

Query: 669 AHG 671
             G
Sbjct: 448 EPG 450



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 45/319 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA+H+  Q+     L  D  +LS+ ++A A   N   G ++  Y +
Sbjct: 339 NLLISGYVQQGLVEDAIHM-CQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQCYCI 397

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  +   +A+T + +Y     +V  K+VF+     D+  W T L+A  + G    A  
Sbjct: 398 RHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSGEALR 457

Query: 145 VFDKMPDRDLPV---------------------------------------YNAMITGCT 165
           +F +M    +P                                        +  M+ G  
Sbjct: 458 LFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGISPNLISWTTMMNGLV 517

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLV 223
           +NG  +  I   R+M +  +R + +S    LS C +   L FGR +H  + ++   S  V
Sbjct: 518 QNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSV 577

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM- 282
           S+  +L+ MY  CG++  A +VF        +   YN M+   A  G V+EA   +R + 
Sbjct: 578 SIETSLVDMYAKCGDISKAERVF--GSKLYSELPLYNAMISAYALYGNVKEATALYRSLD 635

Query: 283 LVASLRPSELTFVSVMSAC 301
               + P  +T  +V+SAC
Sbjct: 636 EDVGIEPDNITITNVLSAC 654


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 214/716 (29%), Positives = 345/716 (48%), Gaps = 113/716 (15%)

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK---R 113
           + +L + L +C   R+     QL +  +  GL   P+ A+ +++   ++  LV      R
Sbjct: 3   VSTLDSLLQSCKCPRHF---KQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLR 59

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           +F+ ++NP+ ++W T + A     H+          P + L  Y                
Sbjct: 60  IFNHLRNPNTFTWNTIMRA-----HL-----YLQNSPHQALLHYK--------------- 94

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITM 232
             LF   H    + D+Y++  +L  C A + EF GRQLH+    SGF   V V N L+ +
Sbjct: 95  --LFLASH---AKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNL 149

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  CG+V  A +VFEE+   V D +S+N ++ G    G VEEA   F  M          
Sbjct: 150 YAVCGSVGSARRVFEESP--VLDLVSWNTLLAGYVQAGEVEEAERVFEGM---------- 197

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQ 350
                      P               E  T  SN+ I ++   G +++A  IF   R +
Sbjct: 198 -----------P---------------ERNTIASNSMIALFGRKGCVEKARRIFNGVRGR 231

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM--- 407
           E+D+VSW+ M+S Y Q  +G  A++ ++EM+  G+  DE    S L++   +  VEM   
Sbjct: 232 ERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRW 291

Query: 408 IHAFVFINGIITNIQVSNALI--------------------------------SAYAKNE 435
           +H      G+   + + NALI                                S Y +  
Sbjct: 292 VHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCG 351

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+ A  +F++M  +++++W+ +I+G+  +    + L  F E+ +  +RPDE  L  A+S
Sbjct: 352 SIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAIS 411

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +C  +++L  GK IH Y+ +N L   + L   +I +Y KCG ++ +L VF  M EK   +
Sbjct: 412 ACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVST 471

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WNA+I   A +G  +++++ F  M+  G + P++ TF  VL AC H GLV+DG   F+SM
Sbjct: 472 WNAVILGLAMNGSVEQSLNMFADMKKTGTV-PNEITFMGVLGACRHMGLVNDGRHYFNSM 530

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
           ++++       H  CM+DLLGRAG L EAE +I+S  +      W AL  AC  H +  +
Sbjct: 531 IHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEM 590

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G  +   L++ + D    +VLLSNIYA+ G W     IR ++ + GV+K PGCS I
Sbjct: 591 GERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMI 646



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 238/535 (44%), Gaps = 82/535 (15%)

Query: 37  YQDALH--LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           +Q  LH  LF+  H+    KPD Y+    L  CA   +   G QLHA+A+ +G     +V
Sbjct: 87  HQALLHYKLFLASHA----KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYV 142

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            NT+++LY     + S +RVF E    D+ SW T L+   + G V+ A  VF+ MP+R+ 
Sbjct: 143 RNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNT 202

Query: 155 PVYNAMIT-----GCTE------NG-----------------YEDIGIG-----LFREMH 181
              N+MI      GC E      NG                 YE   +G     LF EM 
Sbjct: 203 IASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMK 262

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              V  D     S LS C   L +E GR +H L  K G    VS+ NALI +Y +CG +V
Sbjct: 263 GSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIV 322

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVE--------------------------- 273
           DA ++F++  G + D IS+N M+ G    G ++                           
Sbjct: 323 DARRIFDDG-GELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQH 381

Query: 274 ----EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
               EAL  F++M +  +RP E   VS +SAC       +G  +HA   ++  +    +S
Sbjct: 382 ECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILS 441

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
              I MY  CG ++ A  +F  ++EK + +WN +I   A       ++  + +M+  G  
Sbjct: 442 TTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTV 501

Query: 387 PDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           P+E TF  +L +   + +V       ++ +  + I  NI+    ++    +   +K+A +
Sbjct: 502 PNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEE 561

Query: 443 IFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  +M    ++ TW  L+     +     G +   +L+  +L+PD     V LS+
Sbjct: 562 LIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLI--QLQPDHDGFHVLLSN 614


>gi|115479139|ref|NP_001063163.1| Os09g0413300 [Oryza sativa Japonica Group]
 gi|113631396|dbj|BAF25077.1| Os09g0413300 [Oryza sativa Japonica Group]
          Length = 810

 Score =  311 bits (798), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 212/716 (29%), Positives = 359/716 (50%), Gaps = 53/716 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +++   R+G    A+ +F  +      +P+ ++ S  L+ACA     + G  +H   L
Sbjct: 139 NAAVSGAVRNGEGGLAVEMFRDMVWG-SCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    V  +++++Y    D+ +  R F  +   +V SWTT ++   +         
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQ--------- 248

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                   D PV +AM+              L REM +  V  + Y+  S+L  C    +
Sbjct: 249 -------DDEPV-SAML--------------LLREMVRNGVAINKYTATSILLACAQMSM 286

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H +V K+       V  ALI+ Y N G +  + KVFEEA G V +   ++  +
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEA-GTVSNRSIWSAFI 345

Query: 264 DGLASVGRVEEALIR----FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
            G+++      +L+R     R M    LRP++  + SV S+      G Q+H+ A+K GF
Sbjct: 346 SGVSN-----HSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGF 400

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A  TMYS C  + ++  +F  +QE+D VSW  M++ +A       A L +  
Sbjct: 401 IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRN 460

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF-INGIITNIQVSNALISAYAKNE 435
           M   G +PD  +  ++L++    E +   + +H     + G  T I  ++  IS Y+K +
Sbjct: 461 MILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTFI--NDCFISMYSKCQ 518

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A +IF     ++ + W+++I+G+  NG   + +  F  ++ + +R D Y  S  LS
Sbjct: 519 GVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILS 578

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            CA I+   + K +HGY +K  ++S  S+ ++++ +Y++ G++D S +VF+ +   D ++
Sbjct: 579 LCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVA 638

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I  YAQHG  + A++ F  M  +G ++PD     +VLSACS  GLV+ G   F+SM
Sbjct: 639 WTTIIDGYAQHGSSQNALAMFDLMVQLG-VRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              YG  P   H  CM+DLLGR+G L EA+  ++S  ++     W  L +AC  H +  L
Sbjct: 698 RTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLLAACRVHDDTVL 757

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +   + E   D  S +  LSNI A +G WEE A IR+ +K  GV K+PG S +
Sbjct: 758 GRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 287/605 (47%), Gaps = 29/605 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           + Y  T  +    K G +  A  VF          +NA ++G   NG   + + +FR+M 
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162

Query: 182 KLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 ++++++  LS C AG  L  GR +H LV +      V V  +L+ MY  CG++ 
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A + F      V + +S+   + G         A++  R+M+   +  ++ T  S++ A
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280

Query: 301 CL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS- 356
           C      R   Q+H   +K+       V  A I+ Y++ G I+ +  +F   +E   VS 
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSN 337

Query: 357 ---WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
              W+  IS  +  +L RS  L    M   G+RP++  + S+ +S   IE    +H+   
Sbjct: 338 RSIWSAFISGVSNHSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G I  I V +AL + Y++ + ++ +Y++F  M  R+ ++W  ++ GF  +G  V+   
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +++   +PD  +L+  LS+C R   L  GK++HG+ L+    +   + +  I++Y+
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVYGETTF-INDCFISMYS 515

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  +  + R+F+    KD + W+++IS YA +G G+EA+S F+ M     I+ D    +
Sbjct: 516 KCQGVQTARRIFDATPRKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYICS 574

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDY----GFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           ++LS C+     D     +   ++ Y    G +  +   S ++ +  R+G +D++ +V +
Sbjct: 575 SILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFD 629

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLW 707
              +      W  +    A HG+ +    +  L+++    +P   VL+S + A +  GL 
Sbjct: 630 EISVPDLV-AWTTIIDGYAQHGSSQNALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLV 687

Query: 708 EEAAN 712
           E+  N
Sbjct: 688 EQGFN 692



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 223/477 (46%), Gaps = 31/477 (6%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q++    K G S    V   ++ +    G + DA +VF  A G     + +N  + G   
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVF--ADGDPSSAVCWNAAVSGAVR 147

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G    A+  FRDM+  S  P+  T+   +SAC       VG  VH   ++   E    V
Sbjct: 148 NGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             + + MY+ CG +  A   F R+  +++VSW T I+ + Q +   SA+L   EM   G+
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV 267

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             +++T  S+L +   + MV     IH  V    +  +  V  ALIS Y     I+ + +
Sbjct: 268 AINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEK 327

Query: 443 IFH---NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           +F     +S R+I  W+  I+G + N   ++ +Q    +    LRP++   +   SS   
Sbjct: 328 VFEEAGTVSNRSI--WSAFISG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS--- 381

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           ++S+  G Q+H   +K   I  + +G+A+ T+Y++C ++  S +VF  M E+D +SW A+
Sbjct: 382 VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAM 441

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++ +A HG   EA   F+ M   G  KPD  + TA+LSAC+    +  G  +    +  Y
Sbjct: 442 VAGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRPECLLKGKEVHGHTLRVY 500

Query: 620 G---FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHG 671
           G   FI       C + +  +   +  A R+ ++     R D   W ++ S  A +G
Sbjct: 501 GETTFIN-----DCFISMYSKCQGVQTARRIFDA---TPRKDQVMWSSMISGYATNG 549



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 145/296 (48%), Gaps = 15/296 (5%)

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P +F +G+ LA+          E ++   + +G+  N  V   ++   AK+ R++ A ++
Sbjct: 67  PSQFAYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F +  P + + WN  ++G + NG     ++ F +++     P+ +T S ALS+CA    L
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+ +HG VL+ +    + +G +++ +YAKCGD+  ++R F  M  ++ +SW   I+ +
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q  E   A+   + M   G +  ++ T T++L AC+   +V + ++I   MV     + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQI-HGMV-----LK 299

Query: 624 AEDHLSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
            E +L C     ++      G+++ +E+V       +    W A  S  + H  LR
Sbjct: 300 TEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR 355


>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 179/530 (33%), Positives = 290/530 (54%), Gaps = 12/530 (2%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L  KSG +  +   N +I+ Y  CG +  A K+F E      D +S+N M+ G  ++G
Sbjct: 22  HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQR--DAVSWNTMIAGFVNLG 79

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
             E AL   + M          +F S++    C     VG QVH+  +K G+E      +
Sbjct: 80  NFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGS 139

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY+ C ++++A  +F  +  ++ V+WN +IS YAQ     +A      M+  G+  
Sbjct: 140 ALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEI 199

Query: 388 DEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D+ TF  LL         ++   +HA +  +G+ ++  V NA+I+AY++   I+ A ++F
Sbjct: 200 DDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVF 259

Query: 445 HN-MSPRNI--ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
              +  R++  ++WN+++ GF  +G     L+ F  +    +  D Y  S  L SC+ ++
Sbjct: 260 DGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLA 319

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L+ G+Q+H  VLK+       + +++I +Y+KCG ++ + + F+   +  +I+WN+LI 
Sbjct: 320 TLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIF 379

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            YAQHG GK A+  F  M+D  R+K D  TF AVL+ACSH GLV++G     SM +DYG 
Sbjct: 380 GYAQHGRGKIALDLFFLMKDR-RVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGI 438

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H +CM+DLLGRAG LDEA+ +I +   +  +  W  L  AC   G++ L   +A 
Sbjct: 439 PPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVAS 498

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE E ++   YVLLS+++     W E A+I+ L+K  GV K PG SWI
Sbjct: 499 HLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGWSWI 548



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 217/452 (48%), Gaps = 14/452 (3%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +Y+    +S   K G +  A ++F +   RD   +N MI G    G  +  +   + M +
Sbjct: 34  IYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKR 93

Query: 183 LDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                D YSF S+L  V   G +E G+Q+HS++ K G+   V   +AL+ MY  C  V D
Sbjct: 94  YGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVED 153

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A +VF+     + + +++N ++ G A VG    A      M +  +   + TF  +++  
Sbjct: 154 AFEVFKSIN--IRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLL 211

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEKDI--V 355
             P   ++  QVHA+ +K G  + T+V NA IT YS CG I++A  +F   ++ +D+  V
Sbjct: 212 DDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHV 271

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFV 412
           SWN++++ ++Q  L   A+  +  M+S  +  D + F ++L S      +++ + +H  V
Sbjct: 272 SWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLV 331

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             +G   N  V+++LI  Y+K   I+ A + F      + I WN+LI G+  +G     L
Sbjct: 332 LKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIAL 391

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
             F  +    ++ D  T    L++C+ I  +  G      +  +  +  +M     MI L
Sbjct: 392 DLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDL 451

Query: 532 YAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
             + G LD +  +   M  E D + W  L+ A
Sbjct: 452 LGRAGRLDEAKALIEAMPFEPDAMVWKTLLGA 483



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 132/504 (26%), Positives = 225/504 (44%), Gaps = 50/504 (9%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           RI + + G   TS+   +  N  +A     G+++ AL  F++    +    D YS  + L
Sbjct: 51  RIASKMFGE--TSQRDAVSWNTMIAGFVNLGNFETALE-FLKSMKRYGFAVDGYSFGSIL 107

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
              A +     G Q+H+  ++ G +      + +L +Y                      
Sbjct: 108 KGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMY---------------------- 145

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
                     K   V+ A EVF  +  R+   +NA+I+G  + G       L   M    
Sbjct: 146 ---------AKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCMELEG 196

Query: 185 VRRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  D+ +FA +L++ D   L +   Q+H+ + K G +   +V NA+IT Y  CG++ DA 
Sbjct: 197 VEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAE 256

Query: 244 KVFEEA-KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
           +VF+ A +    DH+S+N ++ G +  G  E+AL  F +M    +      F +V+ +C 
Sbjct: 257 RVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCS 316

Query: 302 --LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                ++G QVH   +KSGFE    V+++ I MYS CG I++A   F    +   ++WN+
Sbjct: 317 DLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNS 376

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN---- 415
           +I  YAQ   G+ A+  +  M+   ++ D  TF ++L +   I +VE    + F+     
Sbjct: 377 LIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVE--EGWSFLKSMES 434

Query: 416 --GIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGL 472
             GI   ++    +I    +  R+ +A  +   M    + + W TL+      G      
Sbjct: 435 DYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELAS 494

Query: 473 QHFSELLMSELRPDEYTLSVALSS 496
           Q  S LL  EL P+E+   V LSS
Sbjct: 495 QVASHLL--ELEPEEHCTYVLLSS 516


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  311 bits (798), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 297/528 (56%), Gaps = 11/528 (2%)

Query: 209 QLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           Q+H+L+  +G F    + +  LI  Y    N++ A  VFE+      +  ++N M+   +
Sbjct: 3   QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSIN--AWNSMIIAYS 60

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
                +E L  +  M+   ++P   TF   + AC   +   +G  +  QA+  G+     
Sbjct: 61  RTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVF 120

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V ++ + +Y+  GK+D+A ++F ++ ++D+VSW TMI+ +AQ      AI  Y  MQ   
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER 180

Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
              D      L+    S G  +    +H  +    +  +  +  +LI  YAKN +++ A 
Sbjct: 181 TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELAS 240

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F  +  +++I+W  LI+GF  NGF  + L    E+  S  +PD  +L  +LS+CA++ 
Sbjct: 241 RVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVG 300

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L+ GK +HG+++K   + K+S G A+I +YAKCG L  +  +F+ +  +D I WNA+IS
Sbjct: 301 NLKVGKSLHGHIVKRLYLDKVS-GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMIS 359

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           +Y  HG+G EA+S F  M++   I PD ATF ++LSACSH+GLV++G   F  +++    
Sbjct: 360 SYGIHGDGIEALSLFLKMKET-NITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKI 418

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P+E H +CM+DLL RAG ++EA ++I S HI+     W AL S C  H NL +G ++A 
Sbjct: 419 QPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAK 478

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            +LE   D   +YVL+SN ++ A  W++AA  R+++K TG+ K PG S
Sbjct: 479 KILESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYS 526



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 212/454 (46%), Gaps = 12/454 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D  S    +++  ++ ++  A  VF+KMP R +  +N+MI   +   Y D  + L+  M 
Sbjct: 17  DANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRTNYPDEVLNLYYRMI 76

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              ++ D+ +F   L  C + + L+ G  + +     G+   V VV++++ +Y   G + 
Sbjct: 77  SEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMD 136

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A  VF+  K    D +S+  M+ G A  GR  +A+  +R M         +  V ++ A
Sbjct: 137 KAKIVFD--KMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQA 194

Query: 301 CLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C      + G  VH   ++        +  + I MY+  GK++ A  +F  +  K ++SW
Sbjct: 195 CTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSVISW 254

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFI 414
             +IS +AQ       + + +EMQ+ G +PD  +  S L   A  G +++ + +H  +  
Sbjct: 255 GALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVK 314

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
              +  +    ALI  YAK   +  A  +F  + PR++I WN +I+ + ++G  ++ L  
Sbjct: 315 RLYLDKVS-GTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSL 373

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYA 533
           F ++  + + PD  T +  LS+C+    +  G+   H  + K+ +         M+ L +
Sbjct: 374 FLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLS 433

Query: 534 KCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
           + G ++ + ++  +M I+     W AL+S    H
Sbjct: 434 RAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNH 467



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/500 (24%), Positives = 225/500 (45%), Gaps = 46/500 (9%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SR+ +  + L+L+ ++  S  +KPD  + + TL AC++L +   G  +   A+  G    
Sbjct: 60  SRTNYPDEVLNLYYRM-ISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFD 118

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V +++L+LY  +  +   K VF ++   DV SWTT                       
Sbjct: 119 VFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTT----------------------- 155

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                   MITG  ++G     I ++R M K     D      ++  C + G  +FG  +
Sbjct: 156 --------MITGFAQSGRPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSV 207

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  + +   +    +  +LI MY   G +  A +VFE         IS+  ++ G A  G
Sbjct: 208 HGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPYKSV--ISWGALISGFAQNG 265

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
              + L    +M  +  +P  ++ +S +SAC      +VG  +H   +K  +    S   
Sbjct: 266 FANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKRLYLDKVS-GT 324

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MY+ CG +  A  +F +++ +D++ WN MIS+Y     G  A+  +L+M+   I P
Sbjct: 325 ALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGIEALSLFLKMKETNITP 384

Query: 388 DEFTFGSLLAS---SGFIEMVE-MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           D  TF SLL++   SG +E  +   H  +  + I  + +    ++   ++  ++++AYQ+
Sbjct: 385 DHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQL 444

Query: 444 FHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
             +M  +  +  W  L++G L +   + G     ++L  E  PD+  + V +S+   ++ 
Sbjct: 445 IESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKIL--ESNPDDLGIYVLVSNFFSMAK 502

Query: 503 LRHGKQIHGYVLKNNLISKM 522
                 +   ++KN  + K+
Sbjct: 503 KWDDAAVFRKIMKNTGMRKV 522



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 146/334 (43%), Gaps = 86/334 (25%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +++G     L   V++ +S   KPD+ SL ++L+ACA + N   G  LH +     
Sbjct: 258 ISGFAQNGFANKTLASLVEMQNS-GFKPDLVSLISSLSACAQVGNLKVGKSLHGHI---- 312

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                                  VKR++      D  S T  +    K G + +A  +FD
Sbjct: 313 -----------------------VKRLY-----LDKVSGTALIDMYAKCGALTFARALFD 344

Query: 148 KMPDRDLPVYNAMIT--GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLL 204
           ++  RDL ++NAMI+  G   +G E   + LF +M + ++  D+ +FAS+LS C  +GL+
Sbjct: 345 QIEPRDLILWNAMISSYGIHGDGIE--ALSLFLKMKETNITPDHATFASLLSACSHSGLV 402

Query: 205 EFGRQ-LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           E G+   H L+ KS                          K+    K Y C       M+
Sbjct: 403 EEGQYWFHVLIDKS--------------------------KIQPSEKHYAC-------MV 429

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
           D L+  G+VEEA      M    ++P    +V+++S CL  +   +G  V  + ++S  +
Sbjct: 430 DLLSRAGQVEEAYQLIESM---HIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPD 486

Query: 321 ---AYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
               Y  VSN     +S   K D+A  +F ++ +
Sbjct: 487 DLGIYVLVSN----FFSMAKKWDDAA-VFRKIMK 515


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  311 bits (797), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 188/551 (34%), Positives = 291/551 (52%), Gaps = 15/551 (2%)

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F S+L +C A G L  GR +H+ +   G         AL  MY  C    DA +VF+  
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 250 KGYVCDHISYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
              V D +++N ++ G A  G      E ++R ++      RP  +T VSV+ AC   R 
Sbjct: 121 P--VRDRVAWNALVAGYARNGLARMAMEMVVRMQEE--EGERPDSITLVSVLPACANARA 176

Query: 307 GY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
                + HA A++SG E   +V+ A +  Y  CG I  A ++F  +  K+ VSWN MI  
Sbjct: 177 LAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDG 236

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITN 420
           YAQ    R A+  +  M   G+   + +  + L + G +  ++    +H  +   G+ +N
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V NALI+ Y+K +R+  A  +F  +  R  ++WN +I G   NG     ++ F+ + +
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             ++PD +TL   + + A IS     + IHGY ++ +L   + +  A+I +YAKCG ++ 
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  +FN   E+  I+WNA+I  Y  HG GK AV  F+ M+ +G I P++ TF +VLSACS
Sbjct: 417 ARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACS 475

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           HAGLVD+G   F SM  DYG  P  +H   M+DLLGRAG LDEA   I    +      +
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            A+  AC  H N+ L    A  + E    +   +VLL+NIYA A +W++ A +R  +++ 
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595

Query: 721 GVIKQPGCSWI 731
           G+ K PG S I
Sbjct: 596 GLQKTPGWSII 606



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 263/587 (44%), Gaps = 48/587 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  FV + SS    P + + ++ L  CA   + A G  +HA     G+ +    A  + 
Sbjct: 43  ALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y   R     +RVF                               D+MP RD   +NA
Sbjct: 102 NMYAKCRRPADARRVF-------------------------------DRMPVRDRVAWNA 130

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVLS-VCDAGLLEFGRQLHSLVTKS 217
           ++ G   NG   + + +   M + +  R D+ +  SVL    +A  L   R+ H+   +S
Sbjct: 131 LVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRS 190

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G   LV+V  A++  Y  CG++  A  VF+       + +S+N M+DG A  G   EAL 
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMP--TKNSVSWNAMIDGYAQNGDSREALA 248

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F  M+   +  ++++ ++ + AC    C   G +VH   ++ G ++  SV NA ITMYS
Sbjct: 249 LFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYS 308

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C ++D A  +F  L  +  VSWN MI   AQ      A+  +  MQ   ++PD FT  S
Sbjct: 309 KCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVS 368

Query: 395 LLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           ++ +   I        IH +     +  ++ V  ALI  YAK  R+  A  +F++   R+
Sbjct: 369 VIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERH 428

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +ITWN +I+G+  +GF    ++ F E+    + P+E T    LS+C+    +  G++   
Sbjct: 429 VITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFT 488

Query: 512 YVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEG 569
            + ++  L   M     M+ L  + G LD +      M     +S + A++ A   H   
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH--- 545

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
           K      ++ Q +  + P +  +  +L+   ++A +  D  R+  +M
Sbjct: 546 KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAM 592



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 37/386 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +R+G  + A+ + V++      +PD  +L + L ACAN R  A   + HA+A+
Sbjct: 129 NALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAI 188

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+GL+   +VA  IL  Y                                K G +  A  
Sbjct: 189 RSGLEELVNVATAILDAY-------------------------------CKCGDIRAARV 217

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           VFD MP ++   +NAMI G  +NG     + LF  M +  V   + S  + L  C + G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G ++H L+ + G    VSV+NALITMY  C  V  A  VF+E        +S+N M+
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT--QVSWNAMI 335

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G A  G  E+A+  F  M + +++P   T VSV+ A      P     +H  +++   +
Sbjct: 336 LGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLD 395

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ CG+++ A ++F   +E+ +++WN MI  Y     G++A+  + EM
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE 406
           +S+GI P+E TF S+L++     +V+
Sbjct: 456 KSIGIVPNETTFLSVLSACSHAGLVD 481



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 190/448 (42%), Gaps = 69/448 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +++G  ++AL LF ++        D+ S+   L AC  L     G ++H   +
Sbjct: 231 NAMIDGYAQNGDSREALALFNRMVEEGVDVTDV-SVLAALQACGELGCLDEGMRVHELLV 289

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL +   V N ++++Y                            S C +   VD A  
Sbjct: 290 RIGLDSNVSVMNALITMY----------------------------SKCKR---VDLASH 318

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
           VFD++  R    +NAMI GC +NG  +  + LF  M   +V+ D+++  SV+ ++ D   
Sbjct: 319 VFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD 378

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               R +H    +      V V+ ALI MY  CG V  A  +F  A+      I++N M+
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV--ITWNAMI 436

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G  S G  + A+  F +M    + P+E TF+SV+SAC         HA  +  G E +T
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSAC--------SHAGLVDEGREYFT 488

Query: 324 SVSN------------AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLG 370
           S+                + +    GK+DEA     ++  +  +  +  M+       L 
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC---KLH 545

Query: 371 RSAILAYLEMQSV-GIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITN----- 420
           ++  LA    Q +  + P E  +  LL    A++   + V  +   +  NG+        
Sbjct: 546 KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSI 605

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMS 448
           IQ+ N + + Y+ +   +QA +I+  ++
Sbjct: 606 IQLKNEIHTFYSGSTNHQQAKEIYSRLA 633


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 170/461 (36%), Positives = 255/461 (55%), Gaps = 8/461 (1%)

Query: 279 FRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           +  M   ++ P+  TF  V  AC      R+    H +  K G +      N+ +TMY  
Sbjct: 105 YHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFR 164

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGS 394
           CG+   A  +F  + EKD+VSWN+++S YA+    R A+  +  + +  G  PDE +  S
Sbjct: 165 CGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVS 224

Query: 395 LLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L + G +   E+   +  FV   G+  N  + +ALIS Y+K   +  + +IF  M  R+
Sbjct: 225 VLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRD 284

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
            ITWN  I+ +  NG   + +  F  +  + + P++ TL+  LS+CA I +L  GKQ+  
Sbjct: 285 FITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDE 344

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           Y     L   + +  A+I +YAKCG L+ + RVFN M  K+  SWNA+ISA A HG+ KE
Sbjct: 345 YATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKE 404

Query: 572 AVSCFKAMQDV-GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           A+S F+ M D  G  +P+  TF ++LSAC HAGLVD+G R+FD M   +G +P  +H SC
Sbjct: 405 ALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSC 464

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLL RAG+L EA  VI     +  +    AL SAC    N+ +G  +  +LLE +   
Sbjct: 465 MVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSN 524

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              Y++ S IY    +W++AA +R L++  GV K PGCSWI
Sbjct: 525 SGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWI 565



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 198/442 (44%), Gaps = 46/442 (10%)

Query: 24  LNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
            NI L   + + H Y   LHL+ Q+ + + + P+ ++      ACANL         H  
Sbjct: 84  FNIMLRATTTTWHDYPLTLHLYHQMKTLN-ISPNNFTFPFVFLACANLEEIRMARLAHCE 142

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
             + GL    H  N+++++Y    +    ++VF EI   D+ SW + LS   K+G    A
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREA 202

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            EVF ++ +              E+G+E                 D  S  SVL  C + 
Sbjct: 203 VEVFGRLRE--------------ESGFEP----------------DEMSLVSVLGACGEL 232

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G LE GR +   V + G      + +ALI+MY  CG +V + ++F+       D I++N 
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSR--DFITWNA 290

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
            +   A  G  +EA+  F  M    + P+++T  +V+SAC       +G Q+   A   G
Sbjct: 291 AISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG 350

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            +    V+ A I MY+ CG ++ A  +F  +  K+  SWN MIS  A     + A+  + 
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410

Query: 379 EMQSVG--IRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
            M   G   RP++ TF SLL++   +G + E   +      + G++  I+  + ++   +
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLS 470

Query: 433 KNERIKQAYQIFHNM--SPRNI 452
           +   + +A+ +   M   P N+
Sbjct: 471 RAGHLYEAWDVIEKMPEKPDNV 492



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 49/329 (14%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  L+  ++ G  ++A+ +F ++      +PD  SL + L AC  L +   G  + 
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVE 242

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +  G+K   ++ + ++S+Y    +LVS +R+F  + + D  +W   +SA        
Sbjct: 243 GFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA-------- 294

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           YA                       +NG  D  I LF  M +  V  +  +  +VLS C 
Sbjct: 295 YA-----------------------QNGMADEAISLFHSMKENGVDPNKVTLTAVLSACA 331

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           + G L+ G+Q+    T  G    + V  ALI MY  CG++  A +VF +      +  S+
Sbjct: 332 SIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK--NDASW 389

Query: 260 NVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
           N M+  LAS G+ +EAL  F  M     S RP+++TFVS++SAC        VHA  +  
Sbjct: 390 NAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSAC--------VHAGLVDE 441

Query: 318 GFEAYTSVSNAAITMYSSCGKIDE-ACMI 345
           G+  +  +S    T++    KI+  +CM+
Sbjct: 442 GYRLFDMMS----TLFGLVPKIEHYSCMV 466



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 56/374 (14%)

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
           F   SLL      + ++ IH        I +I   N L+S     +    +  IF +++P
Sbjct: 22  FLLLSLLKQCPSTKTLQQIHT----QFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITP 77

Query: 450 R-NIITWNTLINGFL--LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
             N   +N ++       + +P+  L  + ++    + P+ +T      +CA +  +R  
Sbjct: 78  HPNDYAFNIMLRATTTTWHDYPLT-LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMA 136

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           +  H  V K  L +     N+M+T+Y +CG+   + +VF+ + EKD +SWN+L+S YA+ 
Sbjct: 137 RLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKL 196

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG------------------ 608
           G  +EAV  F  +++    +PD+ +  +VL AC   G ++ G                  
Sbjct: 197 GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYI 256

Query: 609 -----------------TRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVIN 649
                             RIFD M       P+ D ++    +    + G  DEA  + +
Sbjct: 257 GSALISMYSKCGELVSSRRIFDGM-------PSRDFITWNAAISAYAQNGMADEAISLFH 309

Query: 650 SQHIQARSDN---WWALFSACAAHGNLRLGRIIAGLLLERE-QDKPSVYVLLSNIYAAAG 705
           S        N     A+ SACA+ G L LG+ +      R  Q    V   L ++YA  G
Sbjct: 310 SMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCG 369

Query: 706 LWEEAANIRELLKR 719
             E A  +   + R
Sbjct: 370 SLESAQRVFNDMPR 383


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 191/712 (26%), Positives = 360/712 (50%), Gaps = 40/712 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR-NAAFGNQL 79
           L+  N  ++   +  ++++A  +F  +H +  + P++ +L + L +C++L      G  +
Sbjct: 306 LVSFNSMISAYMQHSNWKEAFEVFRLMHCA-GVGPNLITLVSVLPSCSDLLFGINHGESV 364

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   ++ GL     V + ++S+Y                               +K+G +
Sbjct: 365 HGMIIKLGLAEQVSVVSALVSMY-------------------------------SKLGKL 393

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           D +  +F    +++  ++N+MI+G   N   ++ +  F +M    V  D  +  +V+S C
Sbjct: 394 DSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGC 453

Query: 200 D-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
                L   + +H+   ++ F    SV+NAL+ MY +CG++  +  +F++ +  +   IS
Sbjct: 454 RYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRML--IS 511

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAM 315
           +N M+ G A +G  E +L  F  M    +    +T + ++S+        VG  VH+ A+
Sbjct: 512 WNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAI 571

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           KSG  +  S++NA ITMY++CG ++    +F     ++ +++N ++S Y + N+    + 
Sbjct: 572 KSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILP 631

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            + +M     +P+  T  +LL         + IH++   N       +  + +  Y++  
Sbjct: 632 LFTQMVKNDEKPNLVTLLNLLPVCQSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFN 691

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+    IF  +S RN+I WN  ++  +        + +F  +L   +RPDE T+   +S
Sbjct: 692 NIEYCRTIFSLVSARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALIS 751

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +C+++ +      I   +L+      + + NA+I  +++CG +  +  +F+  +EKD+++
Sbjct: 752 ACSQLGNADFAACIMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVT 811

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W A+I+AY+ HG G+ A+  F  M D G + PD  TF ++LSACSH GLV+ G  +F S+
Sbjct: 812 WGAMINAYSMHGNGEAALDLFSMMIDSG-VDPDDITFVSILSACSHNGLVEQGRTLFKSL 870

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             D+G  P  +H +CM+DLLGR G+LDEA  ++ S       +   +L  AC  HGN ++
Sbjct: 871 QADHGITPRMEHYACMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKI 930

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           G  +  LL++ E  K   YV+LSNIYA+AG W +   +R  ++  G+ K  G
Sbjct: 931 GESVGKLLIKSEYGKSRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNVG 982



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 173/664 (26%), Positives = 320/664 (48%), Gaps = 56/664 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G +++A+    ++     + P+  +L   +  C +  +   G+ LH
Sbjct: 205 LISWNAMVSGYSVNGCFREAVETLQEMQQC-GMSPNASTLVGIVGMCGSAGDRVAGDSLH 263

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+AL+ G      + + ++S+Y    DL S +                            
Sbjct: 264 AFALKGGTIDDESLTSALISMYAAFDDLSSSRL--------------------------- 296

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
               VFD  P +DL  +N+MI+   ++        +FR MH   V  +  +  SVL  C 
Sbjct: 297 ----VFDLQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCS 352

Query: 201 AGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC---- 254
             L  +  G  +H ++ K G +  VSVV+AL++MY   G +  +  +F       C    
Sbjct: 353 DLLFGINHGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLF------CCFTEK 406

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVH 311
           ++I +N M+ G         AL  F  M +A + P   T ++V+S C   +   V   +H
Sbjct: 407 NNILWNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIH 466

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A A+++ FE+Y SV NA + MY+ CG I  +  +F +++ + ++SWNTMIS +A+     
Sbjct: 467 AYAVRNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSE 526

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALI 428
           +++  + +M    +  D  T   L++S    E   + E +H+    +G I+++ ++NALI
Sbjct: 527 TSLTLFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALI 586

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YA    ++   Q+F++   RN IT+N L++G+  N    + L  F++++ ++ +P+  
Sbjct: 587 TMYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLV 646

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           TL   L  C    S   GK IH Y ++N    +  L  + + +Y++  +++    +F+++
Sbjct: 647 TLLNLLPVC---QSQLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLV 703

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             ++ I WNA +SA  Q  +    V  FK M  +  ++PD+ T  A++SACS  G  D  
Sbjct: 704 SARNLIVWNAFLSACVQCKQADMVVDYFKHMLFL-NVRPDEVTMLALISACSQLGNADFA 762

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
             I  +++   GF      L+ ++D   R G +  A  + +S  ++  S  W A+ +A +
Sbjct: 763 ACIM-AVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSS-VEKDSVTWGAMINAYS 820

Query: 669 AHGN 672
            HGN
Sbjct: 821 MHGN 824



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/584 (27%), Positives = 270/584 (46%), Gaps = 45/584 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           LN+ +   S  G +++ L L+  +        D ++    + AC        G Q+H   
Sbjct: 109 LNLVVRCFSDHGFHRELLDLYRGLCG---FGSDNFTFPPVIRACTAASCLQLGRQVHCRV 165

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           LR G  +   V   +L +Y                                K G +D + 
Sbjct: 166 LRTGHGSNVGVQTALLDMY-------------------------------AKAGQIDVSR 194

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
            VFD M  RDL  +NAM++G + NG     +   +EM +  +  +  +   ++ +C  AG
Sbjct: 195 RVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAG 254

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
               G  LH+   K G     S+ +ALI+MY    ++  +  VF+     V D +S+N M
Sbjct: 255 DRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQP--VKDLVSFNSM 312

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSG 318
           +         +EA   FR M  A + P+ +T VSV+ +C         G  VH   +K G
Sbjct: 313 ISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLG 372

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
                SV +A ++MYS  GK+D + ++F    EK+ + WN+MIS Y   N    A+ A+ 
Sbjct: 373 LAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFC 432

Query: 379 EMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           +MQ  G+ PD  T  ++++   +   + + + IHA+   N   +   V NAL++ YA   
Sbjct: 433 KMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCG 492

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  +Y +F  M  R +I+WNT+I+GF   G     L  F ++   E+  D  TL   +S
Sbjct: 493 DISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLIS 552

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S +       G+ +H   +K+  IS +SL NA+IT+YA CG ++   ++FN    ++TI+
Sbjct: 553 SLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTIT 612

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           +NAL+S Y ++   ++ +  F  M      KP+  T   +L  C
Sbjct: 613 YNALMSGYRKNNVSEKILPLFTQMVKNDE-KPNLVTLLNLLPVC 655



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 177/389 (45%), Gaps = 19/389 (4%)

Query: 269 VGRVEEALIRFRDMLVASLRP-SELTFVSVMSACL-------CPRVGYQVHAQAMKSGFE 320
           + R+   L ++     AS  P SE+  + V++  L       C R   ++HA+   +G  
Sbjct: 14  ISRIWHQLKQYGAKSFASSSPTSEIAHLKVLTVLLRDTCSLKCLR---EIHARLAVAGAI 70

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQ--EKDIVSWNTMISTYAQRNLGRSAILAYL 378
               V    +  Y S GK   A ++FA        + S N ++  ++     R  +  Y 
Sbjct: 71  QDRFVVTGLVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDHGFHRELLDLYR 130

Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            +   G   D FTF  ++    ++  +++   +H  V   G  +N+ V  AL+  YAK  
Sbjct: 131 GL--CGFGSDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAG 188

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +I  + ++F  M  R++I+WN +++G+ +NG   + ++   E+    + P+  TL   + 
Sbjct: 189 QIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVG 248

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            C        G  +H + LK   I   SL +A+I++YA   DL  S  VF++   KD +S
Sbjct: 249 MCGSAGDRVAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVS 308

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           +N++ISAY QH   KEA   F+ M   G + P+  T  +VL +CS      +       M
Sbjct: 309 FNSMISAYMQHSNWKEAFEVFRLMHCAG-VGPNLITLVSVLPSCSDLLFGINHGESVHGM 367

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +   G       +S ++ +  + G LD +
Sbjct: 368 IIKLGLAEQVSVVSALVSMYSKLGKLDSS 396


>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
 gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score =  311 bits (797), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 191/569 (33%), Positives = 308/569 (54%), Gaps = 19/569 (3%)

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALIT 231
           I +    H  ++      +AS+L  C+  +  F  G Q H+ V KSG     +V N+L++
Sbjct: 46  IRILNSTHSSEIPATPKLYASLLQTCNK-VFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104

Query: 232 MYFNCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           +YF  G  + +  +VF+    +V D IS+  MM G  +     +AL  F +M+   L  +
Sbjct: 105 LYFKLGPGMRETRRVFDGR--FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN 162

Query: 291 ELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E T  S + AC      R+G   H   +  GFE    +S+    +Y    +  +A  +F 
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            + E D++ W  ++S +++ +L   A+ L Y   +  G+ PD  TFG++L + G +  ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282

Query: 407 M---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               IH  +  NGI +N+ V ++L+  Y K   +++A Q+F+ MS +N ++W+ L+ G+ 
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
            NG   + ++ F E+   +L    Y     L +CA ++++R GK+IHG  ++      + 
Sbjct: 343 QNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + +A+I LY K G +D + RV++ M  ++ I+WNA++SA AQ+G G+EAVS F  M   G
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458

Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
            IKPD  +F A+L+AC H G+VD+G   F  M   YG  P  +H SCM+DLLGRAG  +E
Sbjct: 459 -IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517

Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNL-RLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           AE ++     +  +  W  L   CAA+ +  R+   IA  ++E E      YVLLSN+Y 
Sbjct: 518 AENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYK 577

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A G   +A NIR+L+ R GV K  G SWI
Sbjct: 578 AIGRHGDALNIRKLMVRRGVAKTVGQSWI 606



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 131/513 (25%), Positives = 229/513 (44%), Gaps = 58/513 (11%)

Query: 6   ITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTL 64
           +T +I+ ++ T +  +L+L        + G   +A+ +    HSS     P +Y+  + L
Sbjct: 18  LTPSISSSAPTKQSRILEL-------CKLGQLTEAIRILNSTHSSEIPATPKLYA--SLL 68

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDV 123
             C  + +   G Q HA+ +++GL+   +V N++LSLY K    +   +RVF      D 
Sbjct: 69  QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128

Query: 124 YSWTTFLSA-CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
            SWT+ +S   T   HV  A EV                               F EM  
Sbjct: 129 ISWTSMMSGYVTGKEHVK-ALEV-------------------------------FVEMVS 156

Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
             +  + ++ +S +  C + G +  GR  H +V   GF     + + L  +Y      VD
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSA 300
           A +VF+E      D I +  ++   +     EEAL  F  M     L P   TF +V++A
Sbjct: 217 ARRVFDEMP--EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274

Query: 301 CLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C   R    G ++H + + +G  +   V ++ + MY  CG + EA  +F  + +K+ VSW
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
           + ++  Y Q      AI  + EM+      D + FG++L +   +  V +   IH     
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G   N+ V +ALI  Y K+  I  A +++  MS RN+ITWN +++    NG   + +  
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450

Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
           F++++   ++PD  +    L++C     +  G+
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 224/481 (46%), Gaps = 50/481 (10%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL +FV++  S  L  + ++LS+ + AC+ L     G   H   +  G +    +++T+ 
Sbjct: 147 ALEVFVEM-VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            LY   R+ V  +RVF                               D+MP+ D+  + A
Sbjct: 206 YLYGVNREPVDARRVF-------------------------------DEMPEPDVICWTA 234

Query: 160 MITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           +++  ++N   +  +GLF  MH+   +  D  +F +VL+ C +   L+ G+++H  +  +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G    V V ++L+ MY  CG+V +A +VF        + +S++ ++ G    G  E+A+ 
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK--NSVSWSALLGGYCQNGEHEKAIE 352

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            FR+M    L      F +V+ AC      R+G ++H Q ++ G      V +A I +Y 
Sbjct: 353 IFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYG 408

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
             G ID A  +++++  +++++WN M+S  AQ   G  A+  + +M   GI+PD  +F +
Sbjct: 409 KSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIA 468

Query: 395 LLASSGFIEMV-EMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           +L + G   MV E  + FV +    GI    +  + +I    +    ++A  +      R
Sbjct: 469 ILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR 528

Query: 451 NIIT-WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           N  + W  L+     N    +  +  ++ +M EL P +Y +S  L S    +  RHG  +
Sbjct: 529 NDASLWGVLLGPCAANADASRVAERIAKRMM-ELEP-KYHMSYVLLSNMYKAIGRHGDAL 586

Query: 510 H 510
           +
Sbjct: 587 N 587


>gi|125563707|gb|EAZ09087.1| hypothetical protein OsI_31353 [Oryza sativa Indica Group]
          Length = 810

 Score =  311 bits (797), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 212/716 (29%), Positives = 359/716 (50%), Gaps = 53/716 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +++   R+G    A+ +F  +      +P+ ++ S  L+ACA     + G  +H   L
Sbjct: 139 NAAVSGAVRNGEGGLAVEMFRDMVWG-SCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    V  +++++Y    D+ +  R F  +   +V SWTT ++   +         
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQ--------- 248

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                   D PV +AM+              L REM +  V  + Y+  S+L  C    +
Sbjct: 249 -------DDEPV-SAML--------------LLREMVRNGVAINKYTATSILLACAQMSM 286

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H +V K+       V  ALI+ Y N G +  + KVFEEA G V +   ++  +
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEA-GTVSNRSIWSAFI 345

Query: 264 DGLASVGRVEEALIR----FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
            G+++      +L+R     R M    LRP++  + SV S+      G Q+H+ A+K GF
Sbjct: 346 SGVSN-----HSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGF 400

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A  TMYS C  + ++  +F  +QE+D VSW  M++ +A       A L +  
Sbjct: 401 IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRN 460

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF-INGIITNIQVSNALISAYAKNE 435
           M   G +PD  +  ++L++    E +   + +H     + G  T I  ++  IS Y+K +
Sbjct: 461 MILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFI--NDCFISMYSKCQ 518

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A +IF     ++ + W+++I+G+  NG   + +  F  ++ + +R D Y  S  LS
Sbjct: 519 GVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILS 578

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            CA I+   + K +HGY +K  ++S  S+ ++++ +Y++ G++D S +VF+ +   D ++
Sbjct: 579 LCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVA 638

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I  YAQHG  + A++ F  M  +G ++PD     +VLSACS  GLV+ G   F+SM
Sbjct: 639 WTTIIDGYAQHGSSQNALAMFDLMVQLG-VRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              YG  P   H  CM+DLLGR+G L EA+  ++S  ++     W  L +AC  H +  L
Sbjct: 698 RTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVL 757

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +   + E   D  S +  LSNI A +G WEE A IR+ +K  GV K+PG S +
Sbjct: 758 GRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 287/605 (47%), Gaps = 29/605 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           + Y  T  +    K G +  A  VF          +NA ++G   NG   + + +FR+M 
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162

Query: 182 KLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 ++++++  LS C AG  L  GR +H LV +      V V  +L+ MY  CG++ 
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A + F      V + +S+   + G         A++  R+M+   +  ++ T  S++ A
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280

Query: 301 CL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS- 356
           C      R   Q+H   +K+       V  A I+ Y++ G I+ +  +F   +E   VS 
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSN 337

Query: 357 ---WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
              W+  IS  +  +L RS  L    M   G+RP++  + S+ +S   IE    +H+   
Sbjct: 338 RSIWSAFISGVSNHSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G I  I V +AL + Y++ + ++ +Y++F  M  R+ ++W  ++ GF  +G  V+   
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +++   +PD  +L+  LS+C R   L  GK++HG+ L+    +   + +  I++Y+
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTF-INDCFISMYS 515

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  +  + R+F+    KD + W+++IS YA +G G+EA+S F+ M     I+ D    +
Sbjct: 516 KCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYICS 574

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDY----GFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           ++LS C+     D     +   ++ Y    G +  +   S ++ +  R+G +D++ +V +
Sbjct: 575 SILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFD 629

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLW 707
              +      W  +    A HG+ +    +  L+++    +P   VL+S + A +  GL 
Sbjct: 630 EISVPDLV-AWTTIIDGYAQHGSSQNALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLV 687

Query: 708 EEAAN 712
           E+  N
Sbjct: 688 EQGFN 692



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 224/475 (47%), Gaps = 27/475 (5%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q++    K G S    V   ++ +    G + DA +VF  A G     + +N  + G   
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVF--ADGDPSSAVCWNAAVSGAVR 147

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G    A+  FRDM+  S  P+  T+   +SAC       VG  VH   ++   E    V
Sbjct: 148 NGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             + + MY+ CG +  A   F R+  +++VSW T I+ + Q +   SA+L   EM   G+
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV 267

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             +++T  S+L +   + MV     IH  V    +  +  V  ALIS Y     I+ + +
Sbjct: 268 AINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEK 327

Query: 443 IFH---NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           +F     +S R+I  W+  I+G + N   ++ +Q    +    LRP++   +   SS   
Sbjct: 328 VFEEAGTVSNRSI--WSAFISG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS--- 381

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           ++S+  G Q+H   +K   I  + +G+A+ T+Y++C ++  S +VF  M E+D +SW A+
Sbjct: 382 VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAM 441

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++ +A HG   EA   F+ M   G  KPD  + TA+LSAC+ +  +  G  +    +  Y
Sbjct: 442 VAGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVY 500

Query: 620 G---FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           G   FI       C + +  +   +  A R+ ++   + +   W ++ S  A +G
Sbjct: 501 GETTFIN-----DCFISMYSKCQGVQTARRIFDATPCKDQV-MWSSMISGYATNG 549



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 146/296 (49%), Gaps = 15/296 (5%)

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P +F++G+ LA+          E ++   + +G+  N  V   ++   AK+ R++ A ++
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F +  P + + WN  ++G + NG     ++ F +++     P+ +T S ALS+CA    L
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+ +HG VL+ +    + +G +++ +YAKCGD+  ++R F  M  ++ +SW   I+ +
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q  E   A+   + M   G +  ++ T T++L AC+   +V + ++I   MV     + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQI-HGMV-----LK 299

Query: 624 AEDHLSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
            E +L C     ++      G+++ +E+V       +    W A  S  + H  LR
Sbjct: 300 TEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR 355


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/551 (34%), Positives = 291/551 (52%), Gaps = 15/551 (2%)

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +F S+L +C A G L  GR +H+ +   G         AL  MY  C    DA +VF+  
Sbjct: 61  TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120

Query: 250 KGYVCDHISYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
              V D +++N ++ G A  G      E ++R ++      RP  +T VSV+ AC   R 
Sbjct: 121 P--VRDRVAWNALVAGYARNGLARMAMEMVVRMQEE--EGERPDSITLVSVLPACANARA 176

Query: 307 GY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
                + HA A++SG E   +V+ A +  Y  CG I  A ++F  +  K+ VSWN MI  
Sbjct: 177 LAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDG 236

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITN 420
           YAQ    R A+  +  M   G+   + +  + L + G +  ++    +H  +   G+ +N
Sbjct: 237 YAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSN 296

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           + V NALI+ Y+K +R+  A  +F  +  R  ++WN +I G   NG     ++ F+ + +
Sbjct: 297 VSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQL 356

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             ++PD +TL   + + A IS     + IHGY ++ +L   + +  A+I +YAKCG ++ 
Sbjct: 357 ENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNI 416

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  +FN   E+  I+WNA+I  Y  HG GK AV  F+ M+ +G I P++ TF +VLSACS
Sbjct: 417 ARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG-IVPNETTFLSVLSACS 475

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           HAGLVD+G   F SM  DYG  P  +H   M+DLLGRAG LDEA   I    +      +
Sbjct: 476 HAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVY 535

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            A+  AC  H N+ L    A  + E    +   +VLL+NIYA A +W++ A +R  +++ 
Sbjct: 536 GAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKN 595

Query: 721 GVIKQPGCSWI 731
           G+ K PG S I
Sbjct: 596 GLQKTPGWSII 606



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 153/587 (26%), Positives = 263/587 (44%), Gaps = 48/587 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  FV + SS    P + + ++ L  CA   + A G  +HA     G+ +    A  + 
Sbjct: 43  ALAAFVAM-SSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y   R     +RVF                               D+MP RD   +NA
Sbjct: 102 NMYAKCRRPADARRVF-------------------------------DRMPVRDRVAWNA 130

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVLS-VCDAGLLEFGRQLHSLVTKS 217
           ++ G   NG   + + +   M + +  R D+ +  SVL    +A  L   R+ H+   +S
Sbjct: 131 LVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRS 190

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G   LV+V  A++  Y  CG++  A  VF+       + +S+N M+DG A  G   EAL 
Sbjct: 191 GLEELVNVATAILDAYCKCGDIRAARVVFDWMP--TKNSVSWNAMIDGYAQNGDSREALA 248

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
            F  M+   +  ++++ ++ + AC    C   G +VH   ++ G ++  SV NA ITMYS
Sbjct: 249 LFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYS 308

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
            C ++D A  +F  L  +  VSWN MI   AQ      A+  +  MQ   ++PD FT  S
Sbjct: 309 KCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVS 368

Query: 395 LLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           ++ +   I        IH +     +  ++ V  ALI  YAK  R+  A  +F++   R+
Sbjct: 369 VIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERH 428

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +ITWN +I+G+  +GF    ++ F E+    + P+E T    LS+C+    +  G++   
Sbjct: 429 VITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFT 488

Query: 512 YVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEG 569
            + ++  L   M     M+ L  + G LD +      M     +S + A++ A   H   
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLH--- 545

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
           K      ++ Q +  + P +  +  +L+   ++A +  D  R+  +M
Sbjct: 546 KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAM 592



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 190/386 (49%), Gaps = 37/386 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +R+G  + A+ + V++      +PD  +L + L ACAN R  A   + HA+A+
Sbjct: 129 NALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFAI 188

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R+GL+   +VA  IL  Y                                K G +  A  
Sbjct: 189 RSGLEELVNVATAILDAY-------------------------------CKCGDIRAARV 217

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           VFD MP ++   +NAMI G  +NG     + LF  M +  V   + S  + L  C + G 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGC 277

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G ++H L+ + G    VSV+NALITMY  C  V  A  VF+E        +S+N M+
Sbjct: 278 LDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT--QVSWNAMI 335

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G A  G  E+A+  F  M + +++P   T VSV+ A      P     +H  +++   +
Sbjct: 336 LGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLD 395

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ CG+++ A ++F   +E+ +++WN MI  Y     G++A+  + EM
Sbjct: 396 QDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEM 455

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE 406
           +S+GI P+E TF S+L++     +V+
Sbjct: 456 KSIGIVPNETTFLSVLSACSHAGLVD 481



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 190/448 (42%), Gaps = 69/448 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   +++G  ++AL LF ++        D+ S+   L AC  L     G ++H   +
Sbjct: 231 NAMIDGYAQNGDSREALALFNRMVEEGVDVTDV-SVLAALQACGELGCLDEGMRVHELLV 289

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL +   V N ++++Y                            S C +   VD A  
Sbjct: 290 RIGLDSNVSVMNALITMY----------------------------SKCKR---VDLASH 318

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
           VFD++  R    +NAMI GC +NG  +  + LF  M   +V+ D+++  SV+ ++ D   
Sbjct: 319 VFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISD 378

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               R +H    +      V V+ ALI MY  CG V  A  +F  A+      I++N M+
Sbjct: 379 PLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHV--ITWNAMI 436

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G  S G  + A+  F +M    + P+E TF+SV+SAC         HA  +  G E +T
Sbjct: 437 HGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSAC--------SHAGLVDEGREYFT 488

Query: 324 SVSN------------AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLG 370
           S+                + +    GK+DEA     ++  +  +  +  M+       L 
Sbjct: 489 SMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGAC---KLH 545

Query: 371 RSAILAYLEMQSV-GIRPDEFTFGSLL----ASSGFIEMVEMIHAFVFINGIITN----- 420
           ++  LA    Q +  + P E  +  LL    A++   + V  +   +  NG+        
Sbjct: 546 KNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSI 605

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMS 448
           IQ+ N + + Y+ +   +QA +I+  ++
Sbjct: 606 IQLKNEIHTFYSGSTNHQQAKEIYSRLA 633


>gi|46403989|gb|AAS93059.1| pentatricopeptide repeat protein [Oryza sativa Japonica Group]
          Length = 810

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 212/716 (29%), Positives = 359/716 (50%), Gaps = 53/716 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +++   R+G    A+ +F  +      +P+ ++ S  L+ACA     + G  +H   L
Sbjct: 139 NAAVSGAVRNGEGGLAVEMFRDMVWG-SCEPNSFTYSGALSACAAGEELSVGRAVHGLVL 197

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    V  +++++Y    D+ +  R F  +   +V SWTT ++   +         
Sbjct: 198 RRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQ--------- 248

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                   D PV +AM+              L REM +  V  + Y+  S+L  C    +
Sbjct: 249 -------DDEPV-SAML--------------LLREMVRNGVAINKYTATSILLACAQMSM 286

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +    Q+H +V K+       V  ALI+ Y N G +  + KVFEEA G V +   ++  +
Sbjct: 287 VREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVFEEA-GTVSNRSIWSAFI 345

Query: 264 DGLASVGRVEEALIR----FRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
            G+++      +L+R     R M    LRP++  + SV S+      G Q+H+ A+K GF
Sbjct: 346 SGVSN-----HSLLRSVQLLRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAIKEGF 400

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V +A  TMYS C  + ++  +F  +QE+D VSW  M++ +A       A L +  
Sbjct: 401 IHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFLTFRN 460

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF-INGIITNIQVSNALISAYAKNE 435
           M   G +PD  +  ++L++    E +   + +H     + G  T I  ++  IS Y+K +
Sbjct: 461 MILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTFI--NDCFISMYSKCQ 518

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            ++ A +IF     ++ + W+++I+G+  NG   + +  F  ++ + +R D Y  S  LS
Sbjct: 519 GVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMVAASIRIDSYICSSILS 578

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
            CA I+   + K +HGY +K  ++S  S+ ++++ +Y++ G++D S +VF+ +   D ++
Sbjct: 579 LCADIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFDEISVPDLVA 638

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I  YAQHG  + A++ F  M  +G ++PD     +VLSACS  GLV+ G   F+SM
Sbjct: 639 WTTIIDGYAQHGSSQNALAMFDLMVQLG-VRPDTVVLVSVLSACSRNGLVEQGFNYFNSM 697

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              YG  P   H  CM+DLLGR+G L EA+  ++S  ++     W  L +AC  H +  L
Sbjct: 698 RTAYGVEPELQHYCCMVDLLGRSGRLAEAKYFVDSMPMKPDLMVWSTLVAACRVHDDTVL 757

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           GR +   + E   D  S +  LSNI A +G WEE A IR+ +K  GV K+PG S +
Sbjct: 758 GRFVENKIREGNYDSGS-FATLSNILANSGDWEEVARIRKTMK--GVNKEPGWSMV 810



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 152/605 (25%), Positives = 287/605 (47%), Gaps = 29/605 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           + Y  T  +    K G +  A  VF          +NA ++G   NG   + + +FR+M 
Sbjct: 103 NAYVCTGMVDLLAKSGRLRDALRVFADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMV 162

Query: 182 KLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
                 ++++++  LS C AG  L  GR +H LV +      V V  +L+ MY  CG++ 
Sbjct: 163 WGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMG 222

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A + F      V + +S+   + G         A++  R+M+   +  ++ T  S++ A
Sbjct: 223 AAMREFWRMP--VRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGVAINKYTATSILLA 280

Query: 301 CL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS- 356
           C      R   Q+H   +K+       V  A I+ Y++ G I+ +  +F   +E   VS 
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEKVF---EEAGTVSN 337

Query: 357 ---WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
              W+  IS  +  +L RS  L    M   G+RP++  + S+ +S   IE    +H+   
Sbjct: 338 RSIWSAFISGVSNHSLLRSVQL-LRRMFHQGLRPNDKCYASVFSSVNSIEFGGQLHSSAI 396

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G I  I V +AL + Y++ + ++ +Y++F  M  R+ ++W  ++ GF  +G  V+   
Sbjct: 397 KEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAMVAGFATHGHSVEAFL 456

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +++   +PD  +L+  LS+C R   L  GK++HG+ L+    +   + +  I++Y+
Sbjct: 457 TFRNMILDGFKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVYGETTF-INDCFISMYS 515

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KC  +  + R+F+    KD + W+++IS YA +G G+EA+S F+ M     I+ D    +
Sbjct: 516 KCQGVQTARRIFDATPCKDQVMWSSMISGYATNGCGEEAISLFQLMV-AASIRIDSYICS 574

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDY----GFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           ++LS C+     D     +   ++ Y    G +  +   S ++ +  R+G +D++ +V +
Sbjct: 575 SILSLCA-----DIARPFYCKPLHGYAIKAGILSDQSVSSSLVKVYSRSGNMDDSRKVFD 629

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA--GLW 707
              +      W  +    A HG+ +    +  L+++    +P   VL+S + A +  GL 
Sbjct: 630 EISVPDLV-AWTTIIDGYAQHGSSQNALAMFDLMVQLGV-RPDTVVLVSVLSACSRNGLV 687

Query: 708 EEAAN 712
           E+  N
Sbjct: 688 EQGFN 692



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 224/475 (47%), Gaps = 27/475 (5%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q++    K G S    V   ++ +    G + DA +VF  A G     + +N  + G   
Sbjct: 90  QVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRVF--ADGDPSSAVCWNAAVSGAVR 147

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
            G    A+  FRDM+  S  P+  T+   +SAC       VG  VH   ++   E    V
Sbjct: 148 NGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEELSVGRAVHGLVLRRDPEYDVFV 207

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
             + + MY+ CG +  A   F R+  +++VSW T I+ + Q +   SA+L   EM   G+
Sbjct: 208 GTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGFVQDDEPVSAMLLLREMVRNGV 267

Query: 386 RPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             +++T  S+L +   + MV     IH  V    +  +  V  ALIS Y     I+ + +
Sbjct: 268 AINKYTATSILLACAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIELSEK 327

Query: 443 IFH---NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           +F     +S R+I  W+  I+G + N   ++ +Q    +    LRP++   +   SS   
Sbjct: 328 VFEEAGTVSNRSI--WSAFISG-VSNHSLLRSVQLLRRMFHQGLRPNDKCYASVFSS--- 381

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           ++S+  G Q+H   +K   I  + +G+A+ T+Y++C ++  S +VF  M E+D +SW A+
Sbjct: 382 VNSIEFGGQLHSSAIKEGFIHGILVGSALSTMYSRCDNVQDSYKVFEEMQERDGVSWTAM 441

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ++ +A HG   EA   F+ M   G  KPD  + TA+LSAC+ +  +  G  +    +  Y
Sbjct: 442 VAGFATHGHSVEAFLTFRNMILDG-FKPDHVSLTAILSACNRSECLLKGKEVHGHTLRVY 500

Query: 620 G---FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           G   FI       C + +  +   +  A R+ ++   + +   W ++ S  A +G
Sbjct: 501 GETTFIN-----DCFISMYSKCQGVQTARRIFDATPCKDQV-MWSSMISGYATNG 549



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 146/296 (49%), Gaps = 15/296 (5%)

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P +F++G+ LA+          E ++   + +G+  N  V   ++   AK+ R++ A ++
Sbjct: 67  PSQFSYGNALAACARAPAPALAEQVYCAAWKDGLSGNAYVCTGMVDLLAKSGRLRDALRV 126

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F +  P + + WN  ++G + NG     ++ F +++     P+ +T S ALS+CA    L
Sbjct: 127 FADGDPSSAVCWNAAVSGAVRNGEGGLAVEMFRDMVWGSCEPNSFTYSGALSACAAGEEL 186

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             G+ +HG VL+ +    + +G +++ +YAKCGD+  ++R F  M  ++ +SW   I+ +
Sbjct: 187 SVGRAVHGLVLRRDPEYDVFVGTSLVNMYAKCGDMGAAMREFWRMPVRNVVSWTTAIAGF 246

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            Q  E   A+   + M   G +  ++ T T++L AC+   +V + ++I   MV     + 
Sbjct: 247 VQDDEPVSAMLLLREMVRNG-VAINKYTATSILLACAQMSMVREASQI-HGMV-----LK 299

Query: 624 AEDHLSC-----MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
            E +L C     ++      G+++ +E+V       +    W A  S  + H  LR
Sbjct: 300 TEMYLDCVVKEALISTYTNFGFIELSEKVFEEAGTVSNRSIWSAFISGVSNHSLLR 355


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 194/650 (29%), Positives = 329/650 (50%), Gaps = 30/650 (4%)

Query: 91  YPHVANTILSLYKNA--RDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
           +PH+A T   L +N    DL +V ++  ++ +               +G   +A  +F  
Sbjct: 21  FPHLAETHAQLIRNGYQHDLATVTKLTQKLFD---------------VGATRHARALFFS 65

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVCDAGLLEFG 207
           +P  D+ ++N +I G + +  +   I  +  + K   +  DN+++A  +S      L  G
Sbjct: 66  VPKPDIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL--G 122

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
             LH+     GF   + V +AL+ +Y     V  A KVF++      D + +N M+ GL 
Sbjct: 123 MCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDR--DTVLWNTMITGLV 180

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTS 324
                ++++  F+DM+   +R    T  +V+ A       +VG  +   A+K GF     
Sbjct: 181 RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY 240

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V    I+++S C  +D A ++F  +++ D+VS+N +IS ++       A+  + E+   G
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300

Query: 385 IRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
            R    T   L+  S   G + +   I  F   +G I    VS AL + Y++   I  A 
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLAR 360

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           Q+F   S + +  WN +I+G+  +G     +  F E++ +E  P+  T++  LS+CA++ 
Sbjct: 361 QLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG 420

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  GK +H  +   NL   + +  A+I +YAKCG++  + ++F++  EK+T++WN +I 
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIF 480

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y  HG G EA+  F  M  +G  +P   TF +VL ACSHAGLV +G  IF +MVN Y  
Sbjct: 481 GYGLHGYGDEALKLFNEMLHLG-FQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRI 539

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H +CM+D+LGRAG L++A   I    ++     W  L  AC  H +  L R+ + 
Sbjct: 540 EPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASE 599

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L E +      YVLLSNIY+    + +AA++RE +K+  + K PGC+ I
Sbjct: 600 RLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLI 649



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 247/539 (45%), Gaps = 47/539 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           ++  +  +  +  L PD ++ +  ++A  +      G  LHA+A+  G  +   VA+ ++
Sbjct: 89  SISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVASALV 145

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            LY     +   ++VF                               DKMPDRD  ++N 
Sbjct: 146 DLYCKFSRVAYARKVF-------------------------------DKMPDRDTVLWNT 174

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSG 218
           MITG   N   D  + +F++M    VR D+ + A+VL +V +   ++ G  +  L  K G
Sbjct: 175 MITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLG 234

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F     V+  LI+++  C +V  A  +F   +    D +SYN ++ G +  G  E A+  
Sbjct: 235 FHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKP--DLVSYNALISGFSCNGETECAVKY 292

Query: 279 FRDMLVASLRPSELTFVSVMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
           FR++LV+  R S  T V ++     P     +   +    +KSG     SVS A  T+YS
Sbjct: 293 FRELLVSGQRVSSSTMVGLIPVS-SPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYS 351

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
              +ID A  +F    EK + +WN MIS YAQ  L   AI  + EM +    P+  T  S
Sbjct: 352 RLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITS 411

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   A  G +   + +H  +    +  NI VS ALI  YAK   I +A Q+F   S +N
Sbjct: 412 ILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKN 471

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-H 510
            +TWNT+I G+ L+G+  + L+ F+E+L    +P   T    L +C+    +R G +I H
Sbjct: 472 TVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFH 531

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGE 568
             V K  +         M+ +  + G L+ +L  +  M +E     W  L+ A   H +
Sbjct: 532 AMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKD 590



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 70/289 (24%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           +S++ +   N  ++  ++SG  + A+ LF ++ ++ +  P+  ++++ L+ACA L   +F
Sbjct: 366 SSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTT-EFTPNPVTITSILSACAQLGALSF 424

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +H       L+   +V+  ++ +Y                                K
Sbjct: 425 GKSVHQLIKSKNLEQNIYVSTALIDMY-------------------------------AK 453

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
            G++  A ++FD   +++   +N MI G   +GY D  + LF EM  L  +  + +F SV
Sbjct: 454 CGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSV 513

Query: 196 LSVCD-AGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           L  C  AGL+  G ++ H++V K     L                          A+ Y 
Sbjct: 514 LYACSHAGLVREGDEIFHAMVNKYRIEPL--------------------------AEHYA 547

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
           C       M+D L   G++E+AL   R M V    P    + +++ AC+
Sbjct: 548 C-------MVDILGRAGQLEKALEFIRKMPV---EPGPAVWGTLLGACM 586


>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
 gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
          Length = 683

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 186/599 (31%), Positives = 312/599 (52%), Gaps = 49/599 (8%)

Query: 179 EMHKLDVRRDN--YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
           ++H     RD   +S +S+L  C +   L  G+QLH+     GF   + +V  L+T Y +
Sbjct: 29  KLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSS 88

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
              + DA  +   +   + + + +N+++    + G   EAL  +R+M+   +RP   T+ 
Sbjct: 89  FSLLADAHTITVNSD--IVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYP 146

Query: 296 SVMSAC---LCPRVGYQVHAQAMKS-GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           SV+ AC   L    G +VH     + G      V N+ ++MY   G++D A  +F ++ E
Sbjct: 147 SVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPE 206

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS------------ 399
           +D VSWN +IS YA R L + A   + EM+  G   +  T+ ++                
Sbjct: 207 RDAVSWNGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALEL 266

Query: 400 --------------------------GFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
                                     G I++  +IHA    +       V NALI+ Y++
Sbjct: 267 LSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSR 326

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
            + ++ A  +F ++  +++ TWN++++G+       +    F E+L S + P+  T++  
Sbjct: 327 CKDLRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASI 386

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           L  CAR+++L+ GK+ H Y+++       + L N+++ +YA+ G +  + RVF+ +  +D
Sbjct: 387 LPHCARVANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRD 446

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            +++ +LI+ Y   GEGK A+  F  M    RIKPDQ T  AVLSACSH+GLV +G  +F
Sbjct: 447 KVTYTSLIAGYGIQGEGKTALKLFDEMIK-HRIKPDQVTMVAVLSACSHSGLVTEGNVLF 505

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           + M   YG +PA +H SCM+DL GRAG L++A++VI S   +  +  W  L  AC  HGN
Sbjct: 506 EKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGN 565

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             +G   A  LLE + + P  YVL++N++AAAG W + A +R  ++  GV K PGC+W+
Sbjct: 566 TEIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWV 624



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 150/601 (24%), Positives = 270/601 (44%), Gaps = 104/601 (17%)

Query: 27  SLANLSRSGHYQDALHLF--VQIHSSHKLKPDI-YSLSTTLAACANLRNAAFGNQLHAYA 83
           SL +L+R GH   A   F  +++H+S   +  I +S+S+ L +C NL++   G QLHA+ 
Sbjct: 8   SLKDLARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHT 67

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKR--VFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           +  G + +  +   +++ Y +   L       V S+I NP                    
Sbjct: 68  ISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNP-------------------- 107

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
                       LP +N +I+    NG     +  +REM    VR DN+++ SVL  C  
Sbjct: 108 ------------LP-WNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGE 154

Query: 202 GL-LEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            L L+FGR++H  +  + G    + V N+L++MY   G +  A ++F +      D +S+
Sbjct: 155 KLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPER--DAVSW 212

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-------------- 305
           N ++   AS G  +EA   F +M +A    + +T+ ++   C+  R              
Sbjct: 213 NGIISNYASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRR 272

Query: 306 ------------------------VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
                                   +G  +HA A++S F+ + +V NA ITMYS C  +  
Sbjct: 273 CDIDLDPVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRH 332

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
           A ++F  ++ K + +WN+M+S Y   +    A   + EM   GI P+  T  S+L   A 
Sbjct: 333 ADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCAR 392

Query: 399 SGFIEMVEMIHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
              ++  +  H ++    G    + + N+L+  YA++ ++  A ++F ++  R+ +T+ +
Sbjct: 393 VANLQQGKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTS 452

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           LI G+ + G     L+ F E++   ++PD+ T+   LS+C+    +  G         N 
Sbjct: 453 LIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEG---------NV 503

Query: 518 LISKMSL----------GNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQH 566
           L  KMS            + M+ L+ + G L+ + +V   M  + T + W  L+ A   H
Sbjct: 504 LFEKMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIH 563

Query: 567 G 567
           G
Sbjct: 564 G 564


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 203/625 (32%), Positives = 316/625 (50%), Gaps = 18/625 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE-DIGIGLFREM 180
           D++  T  L A  K G V+ A EVF ++   DL  +NA I  C  N    D  + L R M
Sbjct: 169 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 228

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
               +  +  SF ++LS C D   L   R +H+ V + GF   V V  AL+TMY  CG+V
Sbjct: 229 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 288

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            ++  VFE     V +H+S+N M+   A  G    A   +  M     RP+++TFV+ + 
Sbjct: 289 DESIAVFEAMA--VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALK 346

Query: 300 ACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           A              +H     +G E    V  A +TMY S G ID A   F  +  K+I
Sbjct: 347 AACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNI 406

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           VSWN M++ Y      R A+  +  M+   + P++ ++ ++L     +     IHA V  
Sbjct: 407 VSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVG 466

Query: 415 NGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           NG+      ++N ++  +A++  +++A   F     ++ ++WNT +            + 
Sbjct: 467 NGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAIT 526

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLY 532
            F  +     RPD++TL   +  CA + +L  G+ I   +     + + + + +A++ + 
Sbjct: 527 AFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMV 586

Query: 533 AKCGD-LDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           AKCG  +D   R+F  M +  KD ++WN +I+AYAQHG G++A+  F+ MQ    ++PD 
Sbjct: 587 AKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDS 646

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF--IPAEDHLSCMLDLLGRAGYLDEAERV 647
           +TF +VLS CSHAGLV+DG   F       G    P E H +C++D+LGR GYL EAE  
Sbjct: 647 STFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE-HYACLVDVLGRMGYLREAEDF 705

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I    + A S  W +L  AC+++G+L  G   A   +E  +     YV+LSNIYAAAG W
Sbjct: 706 IRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRW 765

Query: 708 EEAANIRELLKRTGVIKQ-PGCSWI 731
           E++  +RE +    V K+ PG S I
Sbjct: 766 EDSIRVREDMAERRVKKRVPGKSSI 790



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 176/706 (24%), Positives = 323/706 (45%), Gaps = 83/706 (11%)

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           I +L+  L  C    + A G QLH   ++ GL     + N ++ +Y   R L      FS
Sbjct: 24  IETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFS 83

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
            +++  + +W T ++A +          VFD        +Y  M                
Sbjct: 84  ALRSRGIATWNTLIAAQSS------PAAVFD--------LYTRM---------------- 113

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAG-----------LLEFGRQLHSLVTKSGFSCLVSV 225
            +   + + R +  +  +VL    +G            +   R +H  +  S     + V
Sbjct: 114 -KLEERAENRPNKLTIIAVLGAIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFV 172

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG---RVEEALIRFRDM 282
             AL+  Y  CG V  A +VF   +  V D I +N  +  +A  G   R + AL+  R M
Sbjct: 173 ATALLDAYGKCGCVESALEVFSRIQ--VPDLICWNAAI--MACAGNDERPDRALLLVRRM 228

Query: 283 LVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
            +  L P+  +FV+++S+C      P +   +HA+  + GF     V+ A +TMY  CG 
Sbjct: 229 WLEGLLPNRASFVAILSSCGDHSSLP-LARSIHARVEELGFLGDVVVATALVTMYGRCGS 287

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
           +DE+  +F  +  ++ VSWN MI+ +AQ     +A   Y  MQ  G RP++ TF + L  
Sbjct: 288 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 347

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              +SS  +     +H ++   G+  ++ V  AL++ Y     I +A   F  +  +NI+
Sbjct: 348 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 407

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN ++  +  NG   + ++ F+ +    L P++ +    L  C  +S  R    IH  V
Sbjct: 408 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEAR---SIHAEV 464

Query: 514 LKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           + N L ++  S+ N ++ ++A+ G L+ ++  F+  + KD++SWN  ++A +   +   A
Sbjct: 465 VGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGA 524

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---S 629
           ++ F  MQ  G  +PD+ T  +V+  C+  G ++ G  I   +      I  E  +   S
Sbjct: 525 ITAFYTMQHEG-FRPDKFTLVSVVDVCADLGTLELGRSIQQQL---SAAIEVERDVVVAS 580

Query: 630 CMLDLLGRAG-YLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLER 686
            +++++ + G  +DE ER+  ++    R D   W  + +A A HG+ R    +  ++ +R
Sbjct: 581 AVMNMVAKCGSSVDECERLF-ARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR 639

Query: 687 EQDKP--SVYVLLSNIYAAAGLWEEAAN----IRELLKRTGVIKQP 726
              +P  S +V + +  + AGL E+  +     RE+L   G+ +QP
Sbjct: 640 SSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVL---GIEQQP 682



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/546 (25%), Positives = 254/546 (46%), Gaps = 38/546 (6%)

Query: 188 DNY----SFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
           D+Y    + A +L  C  DA L + GRQLH  + K G +    + N L+ MY  C ++ D
Sbjct: 19  DDYIPIETLAGLLRRCIGDADLAQ-GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDD 77

Query: 242 ACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
           A   F    ++G      ++N ++   +S   V +   R +    A  RP++LT ++V+ 
Sbjct: 78  ANAAFSALRSRGIA----TWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLG 133

Query: 300 ACL-----------CPRVGYQ--VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           A              P +     VH     S  E    V+ A +  Y  CG ++ A  +F
Sbjct: 134 AIASGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVF 193

Query: 347 ARLQEKDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FI 402
           +R+Q  D++ WN  I   A  +     A+L    M   G+ P+  +F ++L+S G    +
Sbjct: 194 SRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSL 253

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            +   IHA V   G + ++ V+ AL++ Y +   + ++  +F  M+ RN ++WN +I  F
Sbjct: 254 PLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAF 313

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ--IHGYVLKNNLIS 520
              G        +  +     RP++ T   AL +    SS   G+   +HG++    L  
Sbjct: 314 AQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEG 373

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
            + +G A++T+Y   G +D +   F+ +  K+ +SWNA+++AY  +G  +EA+  F AM+
Sbjct: 374 DVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMK 433

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
               + P++ ++ AVL  C     V +   I   +V +  F       + ++ +  R+G 
Sbjct: 434 RQS-LAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGS 489

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L+EA    ++  ++  S +W    +A +A  +L  G I A   ++ E  +P  + L+S +
Sbjct: 490 LEEAVAAFDATVVK-DSVSWNTKVAALSAREDLH-GAITAFYTMQHEGFRPDKFTLVSVV 547

Query: 701 YAAAGL 706
              A L
Sbjct: 548 DVCADL 553



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 191/454 (42%), Gaps = 53/454 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  +A  ++ GH   A  ++ ++      +P+  +  T L A  +  +   G    LH +
Sbjct: 307 NAMIAAFAQCGHRSAAFAIYWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGW 365

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
              AGL+    V   ++++Y +   +   +  F  I   ++ SW   L+A    G    A
Sbjct: 366 IACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREA 425

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
            E+F  M  + L                                 +  S+ +VL  C+  
Sbjct: 426 MELFAAMKRQSLAP-------------------------------NKVSYLAVLGCCED- 453

Query: 203 LLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            +   R +H+ V  +G F+   S+ N ++ M+   G++ +A   F+     V D +S+N 
Sbjct: 454 -VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAFDAT--VVKDSVSWNT 510

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS- 317
            +  L++   +  A+  F  M     RP + T VSV+  C       +G  +  Q   + 
Sbjct: 511 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 570

Query: 318 GFEAYTSVSNAAITMYSSCG-KIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAI 374
             E    V++A + M + CG  +DE   +FAR+ +  KD+V+WNTMI+ YAQ   GR A+
Sbjct: 571 EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 630

Query: 375 LAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVE-MIHAFVFINGII----TNIQVSNALI 428
             +  MQ    +RPD  TF S+L+      +VE  IH F     ++      ++    L+
Sbjct: 631 KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLV 690

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
               +   +++A      M  P + + W +L+  
Sbjct: 691 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGA 724


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 191/663 (28%), Positives = 344/663 (51%), Gaps = 15/663 (2%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           + A+ ++ G       +N  ++ +    DLV   +VF ++   +  S    +S   K G 
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +  A E+FD M +R    +  +I G  ++        L+ +M +  +  D  +  ++LS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS- 148

Query: 199 CDAGLLEFGR---QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              G LE      Q+H+ V K G+   + V N+L+  Y     +  A ++F+       D
Sbjct: 149 -GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK--D 205

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            +++N +M G ++ G  EEA+  F ++  + ++PS+ TF +++SA +     + G QVH 
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K+ F     V NA +  YS   ++DE   +F  + E D +S+N +I++YA     + 
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKE 325

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           +   + ++Q       +F F +LL+   SS  + M   IH      G     +V NAL+ 
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVD 385

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK    K+A +IF N++ ++ + W  +I+ ++  G   +G+  FS++  + +  D+ T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            +  L +CA ++S+  G+Q+H  ++++  +S +  G+A++  YAKCG +  +++ F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E++++SWNALISAYAQ+G     ++ F+ M   G  KPD  +F +VLSACSH G V++  
Sbjct: 506 ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
             F+SM   Y   P  +H + M+D+L R G  DEAE+++     +     W ++ ++C  
Sbjct: 565 WHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624

Query: 670 HGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
           H N  L +  A  L   E  + +  Y+ +SNIYA AG W+  A +++ ++  GV K P  
Sbjct: 625 HKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAY 684

Query: 729 SWI 731
           SW+
Sbjct: 685 SWV 687



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 203/450 (45%), Gaps = 47/450 (10%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +   S  G  ++A+ LF+++H+S  +KP  ++ +  L+A   L +  FG Q+H 
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNS-GIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           + L+        V N +L  Y                               +K   VD 
Sbjct: 266 FVLKTNFVWNVFVGNALLDYY-------------------------------SKHDQVDE 294

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
             ++F +MP+ D   YN +IT    NG       LFR++      R  + FA++LS+  +
Sbjct: 295 VGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354

Query: 202 GL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISY 259
            L L  GRQ+H      G +    V NAL+ MY  C    +A K+F+      C   + +
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD---NIACKSTVPW 411

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             M+      G+ EE +  F DM    +   + TF S++ AC       +G Q+H+  ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SGF +     +A +  Y+ CG + +A   F  + E++ VSWN +IS YAQ       + +
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
           + +M   G +PD  +F S+L++    GF+ E +   ++   I  +    +   +++    
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 433 KNERIKQAYQIFHNM--SPRNIITWNTLIN 460
           +N R  +A ++   M   P  I+ W++++N
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIM-WSSVLN 620



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 46/351 (13%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N+ + + + +G ++++  LF ++  + +     +  +T L+   +  N   G Q+H 
Sbjct: 308 ISYNVVITSYAWNGQFKESFDLFRKLQFT-RFDRRQFPFATLLSIATSSLNLRMGRQIHC 366

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A+  G      V N ++ +Y         +++F  I       WT  +SA  + G  + 
Sbjct: 367 QAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEE 426

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
              VF  M    +P   A              I L R                       
Sbjct: 427 GINVFSDMRRTGVPADQATFASILRACANLASISLGR----------------------- 463

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
                  QLHSL+ +SGF   V   +AL+  Y  CG + DA K F E      + +S+N 
Sbjct: 464 -------QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER--NSVSWNA 514

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRVGYQV-HAQAMKSGF 319
           ++   A  G V+  L  F+ M+ +  +P  ++F+SV+SAC  C  V   + H  +M   +
Sbjct: 515 LISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIY 574

Query: 320 EA------YTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST 363
           E       YTS+    + +    G+ DEA  +   +  E   + W++++++
Sbjct: 575 EVTPKREHYTSM----VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNS 621



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 34/231 (14%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII------------- 453
           +I A +   G   N   SN  ++ + +   +  A+Q+F  M  +N I             
Sbjct: 29  LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88

Query: 454 ------------------TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
                             +W  LI G+L +    +  + ++++    + PD  TL   LS
Sbjct: 89  KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
               + +     QIH +V+K      + + N+++  Y K   L  + ++F  M+ KDT++
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVT 208

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           +N+L++ Y+  G  +EA+  F  + + G IKP   TF A+LSA    GL D
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSG-IKPSDFTFAALLSAA--VGLDD 256


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 198/709 (27%), Positives = 357/709 (50%), Gaps = 44/709 (6%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +R+ H+ +AL LF  +  S +  P+ ++LS+ L +C+ L    FG ++HA  ++ GL+  
Sbjct: 93  TRNKHHFEALQLFDMMLGSGQC-PNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELN 151

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             +  T++ LY      V   ++ + +++ DV SWTT +S+  +      A +++ KM  
Sbjct: 152 HVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKM-- 209

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE-FGRQ 209
                               I  G++          + ++F  +L +    GL + +G+ 
Sbjct: 210 --------------------IEAGIY---------PNEFTFVKLLGMPSFLGLGKGYGKV 240

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LHS +   G    + +  A+I MY  C  + DA KV ++   Y  D   +  ++ G    
Sbjct: 241 LHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKY--DVCLWTSIISGFVQN 298

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVS 326
            +V EA+    DM ++ + P+  T+ S++   S+ L   +G Q H++ +  G E    V 
Sbjct: 299 SQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVG 358

Query: 327 NAAITMYSSCG-KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           NA + MY  C          F  +   +++SW ++I+ +A+      ++  + EMQ+ G+
Sbjct: 359 NALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGV 418

Query: 386 RPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +P+ FT  ++L +   ++ +   + +H ++    +  ++ V NAL+ AYA      +A+ 
Sbjct: 419 QPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWS 478

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +   M+ R+IIT+ TL       G     L+  + +   E++ DE++L+  +S+ A +  
Sbjct: 479 VIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGI 538

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +  GKQ+H Y  K+      S+ N+++  Y+KCG +  + RVF  + E D +SWN LIS 
Sbjct: 539 METGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISG 598

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
            A +G   +A+S F  M+  G +KPD  TF +++ ACS   L++ G   F SM   Y   
Sbjct: 599 LASNGLISDALSAFDDMRLAG-VKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHIT 657

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  DH  C++DLLGR G L+EA  VI +   +  S  +  L +AC  HGN+ LG  +A  
Sbjct: 658 PKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARR 717

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LE +   P++Y+LL+++Y  AGL +     R+L++  G+ + P   W+
Sbjct: 718 CLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWM 766



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/609 (27%), Positives = 297/609 (48%), Gaps = 53/609 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +H+  ++ GL+   +++N +L LY     +   + +F E+ + DV SWTT LSA T+
Sbjct: 35  GACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTTLLSAHTR 94

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
             H   A ++FD M          + +G   N                      ++ +S 
Sbjct: 95  NKHHFEALQLFDMM----------LGSGQCPN---------------------EFTLSSA 123

Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           L  C A G  EFG ++H+ V K G      +   L+ +Y  C   V+  K+    K    
Sbjct: 124 LRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKD--G 181

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV--MSACLCPRVGYQ--V 310
           D +S+  M+  L    +  EAL  +  M+ A + P+E TFV +  M + L    GY   +
Sbjct: 182 DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVL 241

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H+Q +  G E    +  A I MY+ C ++++A  +  +  + D+  W ++IS + Q +  
Sbjct: 242 HSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQV 301

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNAL 427
           R A+ A ++M+  GI P+ FT+ SLL +S  +   E+ E  H+ V + G+  +I V NAL
Sbjct: 302 REAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNAL 361

Query: 428 ISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +  Y K +       + F  ++  N+I+W +LI GF  +GF  + +Q F+E+  + ++P+
Sbjct: 362 VDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPN 421

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
            +TLS  L +C+++ S+   K++HGY++K  +   M++GNA++  YA  G  D +  V  
Sbjct: 422 SFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIG 481

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           MM  +D I++  L +   Q G+ + A+     M +   +K D+ +  + +SA +  G+++
Sbjct: 482 MMNHRDIITYTTLAARLNQQGDHEMALRVITHMCN-DEVKMDEFSLASFISAAAGLGIME 540

Query: 607 DGTRI----FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
            G ++    F S     GF       + ++    + G + +A RV        R  +W  
Sbjct: 541 TGKQLHCYSFKS-----GFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRV-SWNG 594

Query: 663 LFSACAAHG 671
           L S  A++G
Sbjct: 595 LISGLASNG 603



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 211/414 (50%), Gaps = 11/414 (2%)

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           VLS+C++  L+ G  +HS + K G    + + N L+ +Y  C  V  A  +F+E      
Sbjct: 23  VLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHR-- 80

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           D +S+  ++          EAL  F  ML +   P+E T  S + +C        G ++H
Sbjct: 81  DVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIH 140

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
           A  +K G E    +    + +Y+ C    E   + A +++ D+VSW TMIS+  + +   
Sbjct: 141 ASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWS 200

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM----VEMIHAFVFINGIITNIQVSNAL 427
            A+  Y++M   GI P+EFTF  LL    F+ +     +++H+ +   G+  N+ +  A+
Sbjct: 201 EALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAI 260

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  YAK  R++ A ++       ++  W ++I+GF+ N    + +    ++ +S + P+ 
Sbjct: 261 ICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNN 320

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS-LRVFN 546
           +T +  L++ + + SL  G+Q H  V+   L   + +GNA++ +Y KC     + ++ F 
Sbjct: 321 FTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFR 380

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
            +   + ISW +LI+ +A+HG  +E+V  F  MQ  G ++P+  T + +L ACS
Sbjct: 381 GIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAG-VQPNSFTLSTILGACS 433



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 15/189 (7%)

Query: 29  ANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           A L++ G ++ AL +   +  + ++K D +SL++ ++A A L     G QLH Y+ ++G 
Sbjct: 496 ARLNQQGDHEMALRVITHM-CNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGF 554

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
           +    V+N+++  Y     +    RVF +I  PD  SW   +S     G +  A   FD 
Sbjct: 555 ERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDD 614

Query: 149 MP----DRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASVLSVCDA 201
           M       D   + ++I  C++    + G+  F  M K   +  + D+Y       VC  
Sbjct: 615 MRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHY-------VCLV 667

Query: 202 GLLEFGRQL 210
            LL  G +L
Sbjct: 668 DLLGRGGRL 676


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 210/692 (30%), Positives = 354/692 (51%), Gaps = 58/692 (8%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           S  L  C   +N   G  LH     + L     + N++++LY  + D ++   +F  ++N
Sbjct: 56  SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMEN 115

Query: 121 P--DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
              DV S+++ +S      +   A E+FD++  +D                         
Sbjct: 116 SKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQD------------------------- 150

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
                 V  + Y F +V+  C   G  + G  L   V K+G F   V V   LI M+   
Sbjct: 151 -----GVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205

Query: 237 GNVVD---ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSEL 292
            ++ D   A KVF++ +    + +++ +M+  LA  G  +EA+  F +MLV+S   P   
Sbjct: 206 CSLADLESARKVFDKMREK--NVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRF 263

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T   ++S C   +   +G ++H+  ++SG      V  + + MY+ CG + EA  +F  +
Sbjct: 264 TLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323

Query: 350 QEKDIVSWNTMISTYAQRNLG--RSAILAYLEMQ-SVGIRPDEFTFGSLL---ASSGFIE 403
           +E +++SW  +++ Y +   G  R A+  +  M    G+ P+ FTF  +L   AS    +
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFD 383

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW----NTLI 459
             E +H      G+     V N L+S YAK+ R++ A + F  +  +N+++     +T +
Sbjct: 384 FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNV 443

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
             F LN    Q L    E + S +    +T +  LS  A I ++  G+QIH  V+K    
Sbjct: 444 KDFNLNS--EQDLDREVEYVGSGV--SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFR 499

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           + +S+ NA+I++Y+KCG+ + +L+VFN M + + I+W ++I+ +A+HG   +A+  F  M
Sbjct: 500 TDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNM 559

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
            + G +KP+  T+ AVLSACSH GL+D+  + F SM +++G +P  +H +CM+DLLGR+G
Sbjct: 560 LETG-VKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSG 618

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
            L EA   INS    A +  W     +C  H N +LG   A ++LERE   P+ Y+LLSN
Sbjct: 619 LLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSN 678

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +YA  G WE+ A IR+ +K+  + K+ G SWI
Sbjct: 679 LYATEGRWEDVAAIRKNMKQKQITKEAGSSWI 710



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 207/443 (46%), Gaps = 43/443 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L++ G+  +A+ LF+++  S    PD ++L+  ++ CA ++  + G +LH++ +R+G
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L     V  +++ +Y     +   ++VF  ++  +V SWT  ++   + G          
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGG---------- 342

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSVCDAGL--L 204
                               GYE   + +F  M  +  V  + ++F+ VL  C A L   
Sbjct: 343 -------------------GGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC-ASLPDF 382

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           +FG Q+H    K G S +  V N L+++Y   G +  A K F+    +  + +S  V+ D
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVL--FEKNLVSETVVDD 440

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
                  +       R++       S  T+ S++S   C      G Q+HA  +K GF  
Sbjct: 441 TNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRT 500

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             SV+NA I+MYS CG  + A  +F  +++ ++++W ++I+ +A+      A+  +  M 
Sbjct: 501 DLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNML 560

Query: 382 SVGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFI---NGIITNIQVSNALISAYAKNERI 437
             G++P++ T+ ++L++   + ++ E    F  +   +GI+  ++    ++    ++  +
Sbjct: 561 ETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLL 620

Query: 438 KQAYQIFHNMS-PRNIITWNTLI 459
            +A +  ++M    + + W T +
Sbjct: 621 SEAIEFINSMPFDADALVWRTFL 643



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 55/283 (19%)

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T S+ L  C R  +   GK +H  +  +NL     L N++ITLY+K  D   +  +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 549 --IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
              ++D +S++++IS +A +    +AV  F  +     + P++  FTAV+ AC   G   
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSC-----------------------------------M 631
            G  +F   V   G+  +   + C                                   M
Sbjct: 174 TGLCLF-GFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 632 LDLLGRAGYLDEA-----ERVINSQHIQARSDNWWALFSACAAHGNLRLGR------IIA 680
           +  L + GY DEA     E +++S ++  R      L S CA    L LG+      I +
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRF-TLTGLISVCAEIQFLSLGKELHSWVIRS 291

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
           GL+L+       V   L ++YA  GL +EA  + + ++   V+
Sbjct: 292 GLVLDL-----CVGCSLVDMYAKCGLVQEARKVFDGMREHNVM 329


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  311 bits (796), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 204/671 (30%), Positives = 338/671 (50%), Gaps = 24/671 (3%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD-VYSWTTFLSACTKMG 137
           L A  ++ G     +  N +L    ++  L   + +F ++ + +  +S    LS  ++ G
Sbjct: 21  LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80

Query: 138 HVDYACEVFDKMPD--RDLPVYNAMITG--CTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            +  A  +F   P   RD   +  MI              + LFR+M +  V  D  + A
Sbjct: 81  QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140

Query: 194 SVLSVCDAGLLEFGR----QLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +VL++  A            LH    K G     V V N L+  Y   G +  A +VF+E
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LC 303
                 D ++YN MM G +  G   EAL  F  M    L  +  TF +V++       LC
Sbjct: 201 MPHR--DSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLC 258

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
             +G QVH    ++   +   V+N+ +  YS C  +DE   +F  + E+D VS+N MI+ 
Sbjct: 259 --LGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAG 315

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN 420
           YA        +  + EMQS+        + SLL+ +G +  +   + IHA + + G+ + 
Sbjct: 316 YAWNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSE 375

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
             V NALI  Y+K   +  A   F N + +  ++W  +I G + NG   + LQ F  +  
Sbjct: 376 DLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRR 435

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
           + L PD  T S  + + + ++ +  G+Q+H Y++++  +S +  G+A++ +Y KCG LD 
Sbjct: 436 AGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDE 495

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +L+ F+ M E+++ISWNA+ISAYA +G+ K A+  F+ M   G  KPD  TF +VLSACS
Sbjct: 496 ALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYG-FKPDSVTFLSVLSACS 554

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H GL ++  + F+ M  +YG  P ++H SC++D LGR G  D+ + ++     +     W
Sbjct: 555 HNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIW 614

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
            ++  +C  HGN  L R+ A  L        + YV+LSNI+A AG WE+AA ++++++  
Sbjct: 615 SSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDR 674

Query: 721 GVIKQPGCSWI 731
           G+ K+ G SW+
Sbjct: 675 GLRKETGYSWV 685



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 235/495 (47%), Gaps = 25/495 (5%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
             LN  L+  SRSG    A HLF+   SS     D  + +  + A A+   A   + +  
Sbjct: 67  FSLNRMLSGYSRSGQLSAAHHLFL---SSPPHLRDAVTWTVMIGAFASAPGARASDAVSL 123

Query: 82  Y--ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS--------EIQNPDVYSWTTFLS 131
           +   LR G+        T+L+L   +    +   + S         + + +V    T L 
Sbjct: 124 FRDMLREGVAPDRVTVATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLD 183

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           A  K G +  A  VF +MP RD   YNAM+ GC++ G     + LF  M +  +    ++
Sbjct: 184 AYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFT 243

Query: 192 FASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           F++VL+V    G L  GRQ+H LV ++  S  V V N+L+  Y  C  + +  K+F E  
Sbjct: 244 FSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLDFYSKCDCLDEMKKLFHEMI 302

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIR-FRDMLVASLRPSELTFVSVMS-ACLCPRVGY 308
               D++SYNVM+ G A   R    ++R FR+M   S     L + S++S A   P +G 
Sbjct: 303 ER--DNVSYNVMIAGYA-WNRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGI 359

Query: 309 --QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
             Q+HAQ +  G  +   V NA I MYS CG +D A   F    +K  VSW  MI+   Q
Sbjct: 360 GKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQ 419

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
                 A+  +  M+  G+ PD  TF S + +S  + M+ +   +H+++  +G ++++  
Sbjct: 420 NGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFS 479

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            +AL+  Y K   + +A Q F  M  RN I+WN +I+ +   G     ++ F  +L    
Sbjct: 480 GSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGF 539

Query: 484 RPDEYTLSVALSSCA 498
           +PD  T    LS+C+
Sbjct: 540 KPDSVTFLSVLSACS 554



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 137/336 (40%), Gaps = 42/336 (12%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           ++ L+   ++ +   G Q+HA  +  GL +   V N ++ +Y     L + K  F    +
Sbjct: 345 ASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKND 404

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
               SWT  ++ C                                +NG ++  + LF  M
Sbjct: 405 KTGVSWTAMITGC-------------------------------VQNGQQEEALQLFCGM 433

Query: 181 HKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
            +  +  D  +F+S +    +  ++  GRQLHS + +SG    V   +AL+ MY  CG +
Sbjct: 434 RRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCL 493

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            +A + F+E      + IS+N ++   A  G+ + A+  F  ML    +P  +TF+SV+S
Sbjct: 494 DEALQTFDEMPER--NSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLS 551

Query: 300 AC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDI 354
           AC    L             + G   +    +  I      G+ D+   +   +  E D 
Sbjct: 552 ACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDP 611

Query: 355 VSWNTMI---STYAQRNLGRSAILAYLEMQSVGIRP 387
           + W++++    T+  ++L R A      M S    P
Sbjct: 612 IIWSSILHSCRTHGNQDLARVAAEKLFSMGSTDATP 647


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 189/615 (30%), Positives = 322/615 (52%), Gaps = 13/615 (2%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           VY  T+ L+   K G V  A  +FD+MP+RD  V+NA+I G + NGYE     LF  M +
Sbjct: 85  VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144

Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
                   +  ++L  C   G +  GR +H +  KSG      V NALI+ Y  C  +  
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A  +F E K      +S+N M+   +  G  EEA+  F++M   ++  S +T ++++SA 
Sbjct: 205 AEVLFREMKDK--STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA- 261

Query: 302 LCPRVGYQ-VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               V ++ +H   +K G     SV  + +  YS CG +  A  ++A  ++  IV   ++
Sbjct: 262 ---HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           +S YA++     A++ + + + + ++ D      +L     S  I++   +H +   +G+
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            T   V N LI+ Y+K + ++    +F  +    +I+WN++I+G + +G      + F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438

Query: 478 LLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           ++++  L PD  T++  L+ C+++  L  GK++HGY L+NN  ++  +  A+I +YAKCG
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCG 498

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           +   +  VF  +    T +WN++IS Y+  G    A+SC+  M++ G +KPD+ TF  VL
Sbjct: 499 NEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG-LKPDEITFLGVL 557

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SAC+H G VD+G   F +M+ ++G  P   H + M+ LLGRA    EA  +I    I+  
Sbjct: 558 SACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPD 617

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
           S  W AL SAC  H  L +G  +A  +   +     +YVL+SN+YA   +W++   +R +
Sbjct: 618 SAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNM 677

Query: 717 LKRTGVIKQPGCSWI 731
           +K  G     G S I
Sbjct: 678 MKDNGYDGYLGVSQI 692



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/519 (26%), Positives = 244/519 (47%), Gaps = 20/519 (3%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG---R 208
           RDL  +++++  C         I +FR++ +  +  ++++ +  L         F     
Sbjct: 11  RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+ + +TKSG    V V  +L+ +Y   G V  A  +F+E      D + +N ++ G + 
Sbjct: 71  QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPER--DTVVWNALICGYSR 128

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSV 325
            G   +A   F  ML     PS  T V+++  C  C  V  G  VH  A KSG E  + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA I+ YS C ++  A ++F  +++K  VSWNTMI  Y+Q  L   AI  +  M    +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
                T  +LL++       E +H  V   G++ +I V  +L+ AY++   +  A +++ 
Sbjct: 249 EISPVTIINLLSAH---VSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
           +    +I+   ++++ +   G     + +FS+     ++ D   L   L  C + S +  
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G  +HGY +K+ L +K  + N +IT+Y+K  D++  L +F  + E   ISWN++IS   Q
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD-SMVNDYGFIPA 624
            G    A   F  M   G + PD  T  ++L+ CS    ++ G  +   ++ N++     
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----E 481

Query: 625 EDHLSC--MLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            ++  C  ++D+  + G   +AE V  S  I+A     W
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKS--IKAPCTATW 518



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 239/554 (43%), Gaps = 50/554 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+G+  DA  LF+ +       P   +L   L  C      + G  +H  A 
Sbjct: 120 NALICGYSRNGYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL+    V N ++S Y    +L S + +F E+++    SW T + A ++ G  + A  
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF  M ++++ +                                  S  +++++  A + 
Sbjct: 239 VFKNMFEKNVEI----------------------------------SPVTIINLLSAHVS 264

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMM 263
                LH LV K G    +SVV +L+  Y  CG +V A +++  AK    D I     ++
Sbjct: 265 H--EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ---DSIVGLTSIV 319

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A  G ++ A++ F       ++   +  V ++  C       +G  +H  A+KSG  
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             T V N  ITMYS    ++    +F +LQE  ++SWN++IS   Q     +A   + +M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439

Query: 381 Q-SVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
             + G+ PD  T  SLLA       + + + +H +   N       V  ALI  YAK   
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             QA  +F ++      TWN++I+G+ L+G   + L  + E+    L+PDE T    LS+
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT--LYAKCGDLDCSLRVFNMMIEKDTI 554
           C     +  GK     ++K   IS      A++   L   C   +    ++ M I+ D+ 
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619

Query: 555 SWNALISAYAQHGE 568
            W AL+SA   H E
Sbjct: 620 VWGALLSACIIHRE 633



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   +SG    A  +F Q+  +  L PD  ++++ LA C+ L     G +LH
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG--H 138
            Y LR   +    V   ++ +Y    + V  + VF  I+ P   +W + +S  +  G  H
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQH 532

Query: 139 VDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
              +C  E+ +K    D   +  +++ C   G+ D G   FR M K
Sbjct: 533 RALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 169/476 (35%), Positives = 256/476 (53%), Gaps = 34/476 (7%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQ 313
           I YNVM+    +    ++AL+ FRDM+     P   T+  V+ AC C    R+G Q+H  
Sbjct: 99  IFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGA 158

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
             K G +    V N  I +Y  CG + EA  +   +Q KD+VSWN+M++ YAQ      A
Sbjct: 159 VFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDA 218

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +    EM  V  +PD  T  SLL +                   +TN    N L   Y +
Sbjct: 219 LDICREMDGVRQKPDACTMASLLPA-------------------VTNTSSENVL---YVE 256

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
                   ++F N+  +++++WN +I+ ++ N  P + +  + ++   E+ PD  T +  
Sbjct: 257 --------EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASV 308

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L +C  +S+L  G++IH YV +  L   M L N++I +YA+CG L+ + RVF+ M  +D 
Sbjct: 309 LRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDV 368

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
            SW +LISAY   G+G  AV+ F  MQ+ G+  PD   F A+LSACSH+GL+++G   F 
Sbjct: 369 ASWTSLISAYGMTGQGYNAVALFTEMQNSGQ-SPDSIAFVAILSACSHSGLLNEGKFYFK 427

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
            M +DY   P  +H +C++DLLGR+G +DEA  +I    ++     W AL S+C  + N+
Sbjct: 428 QMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNM 487

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
            +G + A  LL+   ++   YVLLSNIYA AG W E   IR L+KR  + K PG S
Sbjct: 488 DIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGIS 543



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 214/468 (45%), Gaps = 46/468 (9%)

Query: 107 DLVSVKRVFSEI------QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
           D+ ++K V S++      +NP +      + A    G    A  VFD +P+R++  YN M
Sbjct: 47  DIKTLKNVHSKVFNLSFHENPSL--GIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVM 104

Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGF 219
           I     N   D  + +FR+M       D+Y++  VL  C  +  L  G QLH  V K G 
Sbjct: 105 IRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGL 164

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              + V N LI +Y  CG + +A  V +E +    D +S+N M+ G A   + ++AL   
Sbjct: 165 DLNLFVGNGLIALYGKCGCLPEARCVLDEMQSK--DVVSWNSMVAGYAQNMQFDDALDIC 222

Query: 280 RDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
           R+M     +P   T  S++ A                      TS  N    +Y     +
Sbjct: 223 REMDGVRQKPDACTMASLLPAV-------------------TNTSSEN---VLY-----V 255

Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
           +E   +F  L++K +VSWN MIS Y + ++   ++  YL+M    + PD  T  S+L + 
Sbjct: 256 EE---MFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC 312

Query: 400 GFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           G +  + +   IH +V    +  N+ + N+LI  YA+   ++ A ++F  M  R++ +W 
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           +LI+ + + G     +  F+E+  S   PD       LS+C+    L  GK     +  +
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDD 432

Query: 517 NLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
             I+ +    A ++ L  + G +D +  +   M ++ +   W AL+S+
Sbjct: 433 YKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSS 480



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 1/211 (0%)

Query: 392 FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
            G +L     I+ ++ +H+ VF      N  +   L+ AYA       A  +F  +  RN
Sbjct: 38  LGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERN 97

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +I +N +I  ++ N      L  F +++     PD YT    L +C+   +LR G Q+HG
Sbjct: 98  VIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHG 157

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            V K  L   + +GN +I LY KCG L  +  V + M  KD +SWN++++ YAQ+ +  +
Sbjct: 158 AVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDD 217

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           A+   + M  V R KPD  T  ++L A ++ 
Sbjct: 218 ALDICREMDGV-RQKPDACTMASLLPAVTNT 247



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 199/469 (42%), Gaps = 67/469 (14%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y DAL +F  + S     PD Y+    L AC+   N   G QLH    + GL     V N
Sbjct: 114 YDDALLVFRDMVSG-GFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGN 172

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------------------------- 131
            +++LY     L   + V  E+Q+ DV SW + ++                         
Sbjct: 173 GLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKP 232

Query: 132 -ACTKMG-----------HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
            ACT              +V Y  E+F  +  + L  +N MI+   +N      + L+ +
Sbjct: 233 DACTMASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQ 292

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M K +V  D  + ASVL  C D   L  GR++H  V +      + + N+LI MY  CG 
Sbjct: 293 MGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGC 352

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA +VF+  K    D  S+  ++      G+   A+  F +M  +   P  + FV+++
Sbjct: 353 LEDAKRVFDRMKFR--DVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAIL 410

Query: 299 SACLCPRVGY----QVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARLQEK 352
           SA  C   G     + + + M   ++    + + A  + +    G++DEA  I  ++  K
Sbjct: 411 SA--CSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468

Query: 353 -DIVSWNTMIST---YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL----ASSGFIEM 404
            +   W  ++S+   Y+  ++G  A    L++      P+E  +  LL    A +G    
Sbjct: 469 PNERVWGALLSSCRVYSNMDIGILAADKLLQLA-----PEESGYYVLLSNIYAKAGRWTE 523

Query: 405 VEMIHAFVFINGI-----ITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           V  I + +    I     I+N++++N + +  A +    Q+ +I+  +S
Sbjct: 524 VTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELS 572



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 68/288 (23%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N  K+ L+  N+ ++   ++     ++ L++Q+    +++PD  + ++ L AC +L    
Sbjct: 261 NLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKC-EVEPDAITCASVLRACGDLSALL 319

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G ++H Y  R  L     + N+++ +Y     L   KRVF  ++  DV SWT+ +SA  
Sbjct: 320 LGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISA-- 377

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                       G T  GY    + LF EM       D+ +F +
Sbjct: 378 ---------------------------YGMTGQGYN--AVALFTEMQNSGQSPDSIAFVA 408

Query: 195 VLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           +LS C  +GLL  G+                        YF    + D  K+    + + 
Sbjct: 409 ILSACSHSGLLNEGK-----------------------FYFK--QMTDDYKITPIIEHFA 443

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           C       ++D L   GRV+EA    + M    ++P+E  + +++S+C
Sbjct: 444 C-------LVDLLGRSGRVDEAYNIIKQM---PMKPNERVWGALLSSC 481


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 204/626 (32%), Positives = 317/626 (50%), Gaps = 20/626 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE-DIGIGLFREM 180
           D++  T  L A  K G V+ A EVF ++   DL  +NA I  C  N    D  + L R M
Sbjct: 165 DLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRM 224

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
               +  +  SF ++LS C D   L   R +H+ V + GF   V V  AL+TMY  CG+V
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSV 284

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            ++  VFE     V +H+S+N M+   A  G    A   +  M     RP+++TFV+ + 
Sbjct: 285 DESIAVFEAMA--VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALK 342

Query: 300 ACLCPRVGYQV------HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           A  C      +      H     +G E    V  A +TMY S G ID A   F  +  K+
Sbjct: 343 AA-CSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKN 401

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
           IVSWN M++ Y      R A+  +  M+   + P++ ++ ++L     +     IHA V 
Sbjct: 402 IVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVV 461

Query: 414 INGIITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            NG+      ++N ++  +A++  +++A   F     ++ ++WNT +            +
Sbjct: 462 GNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAI 521

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITL 531
             F  +     RPD++TL   +  CA + +L  G+ I   +     + + + + +A++ +
Sbjct: 522 TAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVVVESAVMNM 581

Query: 532 YAKCGD-LDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
            AKCG  +D   R+F  M +  KD ++WN +I+AYAQHG G++A+  F+ MQ    ++PD
Sbjct: 582 VAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPD 641

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF--IPAEDHLSCMLDLLGRAGYLDEAER 646
            +TF +VLS CSHAGLV+DG   F       G    P E H +C++D+LGR GYL EAE 
Sbjct: 642 SSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVE-HYACLVDVLGRMGYLREAED 700

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I    + A S  W +L  AC+++G+L  G   A   +E  +     YV+LSNIYAAAG 
Sbjct: 701 FIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGR 760

Query: 707 WEEAANIRELLKRTGVIKQ-PGCSWI 731
           WE++  +RE +    V K+ PG S I
Sbjct: 761 WEDSIRVREDMAERRVKKRAPGKSSI 786



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 179/706 (25%), Positives = 323/706 (45%), Gaps = 87/706 (12%)

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
           I +L+  L  C    + A G QLH   ++ GL     + N ++ +Y   R L      FS
Sbjct: 24  IETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFS 83

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
            +++  + +W T ++A +          VFD        +Y  M                
Sbjct: 84  ALRSRGIATWNTLIAAQSS------PAAVFD--------LYTRM---------------- 113

Query: 177 FREMHKLDVRRDN----YSFASVLSVCDAG-------LLEFGRQLHSLVTKSGFSCLVSV 225
                KL+ R +N     +  +VL    +G            R +H  +  S     + V
Sbjct: 114 -----KLEERAENRPNRLTIIAVLGAIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFV 168

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG---RVEEALIRFRDM 282
             AL+  Y  CG V  A +VF   +  V D I +N  +  +A  G   R + AL+  R M
Sbjct: 169 ATALLDAYGKCGCVESALEVFSRIQ--VPDLICWNAAI--MACAGNDERPDRALLLVRRM 224

Query: 283 LVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
            +  L P+  +FV+++S+C      P +   +HA+  + GF     V+ A +TMY  CG 
Sbjct: 225 WLEGLLPNRASFVAILSSCGDHSSLP-LARSIHARVEELGFLGDVVVATALVTMYGRCGS 283

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
           +DE+  +F  +  ++ VSWN MI+ +AQ     +A   Y  MQ  G RP++ TF + L  
Sbjct: 284 VDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKA 343

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              +SS  +     +H ++   G+  ++ V  AL++ Y     I +A   F  +  +NI+
Sbjct: 344 ACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIV 403

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN ++  +  NG   + ++ F+ +    L P++ +    L  C  +S  R    IH  V
Sbjct: 404 SWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSEAR---SIHAEV 460

Query: 514 LKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           + N L ++  S+ N ++ ++A+ G L+ ++  F+  + KD++SWN  ++A +   +   A
Sbjct: 461 VGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGA 520

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---S 629
           ++ F  MQ  G  +PD+ T  +V+  C+  G ++ G  I   +      I  E  +   S
Sbjct: 521 ITAFYTMQHEG-FRPDKFTLVSVVDVCADLGTLELGRSIQQQL---SAAIEVERDVVVES 576

Query: 630 CMLDLLGRAG-YLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLER 686
            +++++ + G  +DE ER+  ++    R D   W  + +A A HG+ R    +  ++ +R
Sbjct: 577 AVMNMVAKCGSSVDECERLF-ARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQR 635

Query: 687 EQDKP--SVYVLLSNIYAAAGLWEEAANI----RELLKRTGVIKQP 726
              +P  S +V + +  + AGL E+  +     RE+L   G+ +QP
Sbjct: 636 SSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVL---GIEQQP 678



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 141/542 (26%), Positives = 253/542 (46%), Gaps = 34/542 (6%)

Query: 188 DNY----SFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
           D+Y    + A +L  C  DA L + GRQLH  + K G +    + N L+ MY  C ++ D
Sbjct: 19  DDYIPIETLAGLLRRCIGDADLAQ-GRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDD 77

Query: 242 ACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
           A   F    ++G      ++N ++   +S   V +   R +    A  RP+ LT ++V+ 
Sbjct: 78  ANAAFSALRSRGIA----TWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLG 133

Query: 300 ACLC--PRVGYQVHAQA-------MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           A     P       AQA         S  E    V+ A +  Y  CG ++ A  +F+R+Q
Sbjct: 134 AIASGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQ 193

Query: 351 EKDIVSWNTMISTYAQRN-LGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVE 406
             D++ WN  I   A  +     A+L    M   G+ P+  +F ++L+S G    + +  
Sbjct: 194 VPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLAR 253

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IHA V   G + ++ V+ AL++ Y +   + ++  +F  M+ RN ++WN +I  F   G
Sbjct: 254 SIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCG 313

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ--IHGYVLKNNLISKMSL 524
                   +  +     RP++ T   AL +    SS   G+   +HG++    L   + +
Sbjct: 314 HRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMV 373

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           G A++T+Y   G +D +   F+ +  K+ +SWNA+++AY  +G  +EA+  F AM+    
Sbjct: 374 GTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQS- 432

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           + P++ ++ AVL  C     V +   I   +V +  F       + ++ +  R+G L+EA
Sbjct: 433 LAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEA 489

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
               ++  ++  S +W    +A +A  +L  G I A   ++ E  +P  + L+S +   A
Sbjct: 490 MAAFDATVVK-DSVSWNTKVAALSAREDLH-GAITAFYTMQHEGFRPDKFTLVSVVDVCA 547

Query: 705 GL 706
            L
Sbjct: 548 DL 549



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/454 (23%), Positives = 190/454 (41%), Gaps = 53/454 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
           N  +A  ++ GH   A  ++ ++      +P+  +  T L A  +  +   G    LH +
Sbjct: 303 NAMIAAFAQCGHRSAAFAIYWRMQQ-EGFRPNKITFVTALKAACSSSSQDLGESAALHGW 361

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
              AGL+    V   ++++Y +   +   +  F  I   ++ SW   L+A    G    A
Sbjct: 362 IACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREA 421

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
            E+F  M  + L                                 +  S+ +VL  C+  
Sbjct: 422 MELFAAMKRQSLAP-------------------------------NKVSYLAVLGCCED- 449

Query: 203 LLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            +   R +H+ V  +G F+   S+ N ++ M+   G++ +A   F+     V D +S+N 
Sbjct: 450 -VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDAT--VVKDSVSWNT 506

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS- 317
            +  L++   +  A+  F  M     RP + T VSV+  C       +G  +  Q   + 
Sbjct: 507 KVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAI 566

Query: 318 GFEAYTSVSNAAITMYSSCG-KIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAI 374
             E    V +A + M + CG  +DE   +FAR+ +  KD+V+WNTMI+ YAQ   GR A+
Sbjct: 567 EVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKAL 626

Query: 375 LAYLEMQS-VGIRPDEFTFGSLLASSGFIEMVE-MIHAFVFINGII----TNIQVSNALI 428
             +  MQ    +RPD  TF S+L+      +VE  IH F     ++      ++    L+
Sbjct: 627 KLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLV 686

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
               +   +++A      M  P + + W +L+  
Sbjct: 687 DVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGA 720


>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Cucumis sativus]
          Length = 616

 Score =  310 bits (795), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/536 (33%), Positives = 287/536 (53%), Gaps = 20/536 (3%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLAS 268
           LHSLV K G    +SV N L+ +Y  C ++  A  +F+E A+  V   +S+N ++ GL  
Sbjct: 38  LHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDEMARRNV---VSWNTVICGLVD 94

Query: 269 VG-------RVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSG 318
            G       R     + F+ ML+  + P  +TF  +  +C+       G Q+H+  MK G
Sbjct: 95  GGYGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIG 154

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F+    V +A +  Y+ CG  ++A + F+ +  +D+V WN M+      +L R AI  + 
Sbjct: 155 FDLDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVMLYCCVFNSLSREAIEVFR 214

Query: 379 EMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            MQ  G + D+FTF SLL+     G  E+ + +H  +       +I V+++L++ YAKN+
Sbjct: 215 LMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLDILVASSLVNVYAKND 274

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            +  A ++F  M  RN ++W T+I G+  + +  + ++ F  +L  +  PDE T +  LS
Sbjct: 275 NLYDARKVFDEMPTRNSVSWTTMIVGYGQHEYGKEAVKLFRRMLRKDYCPDELTFASLLS 334

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           SC   S      Q+H  ++K    + +S+ N +I  Y+KCG +  +L+ F ++ E D ++
Sbjct: 335 SCGFTSGASELMQVHSCLIKLGFEAFLSINNGLIYAYSKCGIIAAALQCFRLVAEPDLVT 394

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W ++I   A  G  K+AV  F  M   G I+PD+  F  VLSACSH G V  G   F+ M
Sbjct: 395 WTSIICGLALCGLEKDAVKLFDKMLSYG-IRPDKIAFLGVLSACSHGGFVSMGLHYFNLM 453

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
            N Y  +P  +HL+C++DLLGRAG LD+A  ++ S   +A  D   A   AC  HGNLRL
Sbjct: 454 TNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHGNLRL 513

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +    +    E D+P  Y L+SN+YA+ G W + A +R+L+      K PG SW+
Sbjct: 514 AK--RAMEFASEPDEPVNYSLVSNMYASEGRWSDVARMRKLINDRCEQKTPGLSWV 567



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 143/529 (27%), Positives = 235/529 (44%), Gaps = 52/529 (9%)

Query: 57  IYSLS-TTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           ++S S   L A A + +      LH+  ++ GL     V N +L +Y   RDL S + +F
Sbjct: 15  VHSFSFNVLKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLF 74

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            E+   +V SW T +      G   Y  E   KM    + +Y                  
Sbjct: 75  DEMARRNVVSWNTVICGLVDGG---YGGEF--KMRQHSIFLY------------------ 111

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            F++M    V  D  +F  +   C     +E GRQLHS V K GF     V +A++  Y 
Sbjct: 112 -FKKMLMGLVDPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSAVVDFYA 170

Query: 235 NCGNVVDACKVFEEAK-GYVC----DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
            CG       ++E+A+  + C    D + +NVM+          EA+  FR M +   + 
Sbjct: 171 KCG-------LYEDARLAFSCILYRDLVLWNVMLYCCVFNSLSREAIEVFRLMQLEGFKG 223

Query: 290 SELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
            + TF S++S C       +G Q+H   +K  F+    V+++ + +Y+    + +A  +F
Sbjct: 224 DDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLDILVASSLVNVYAKNDNLYDARKVF 283

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---- 402
             +  ++ VSW TMI  Y Q   G+ A+  +  M      PDE TF SLL+S GF     
Sbjct: 284 DEMPTRNSVSWTTMIVGYGQHEYGKEAVKLFRRMLRKDYCPDELTFASLLSSCGFTSGAS 343

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E+++ +H+ +   G    + ++N LI AY+K   I  A Q F  ++  +++TW ++I G 
Sbjct: 344 ELMQ-VHSCLIKLGFEAFLSINNGLIYAYSKCGIIAAALQCFRLVAEPDLVTWTSIICGL 402

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN---LI 519
            L G     ++ F ++L   +RPD+      LS+C+    +  G  +H + L  N   L+
Sbjct: 403 ALCGLEKDAVKLFDKMLSYGIRPDKIAFLGVLSACSHGGFVSMG--LHYFNLMTNQYQLV 460

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMI-EKDTISWNALISAYAQHG 567
                   +I L  + G LD +  +   M  E    +  A I A   HG
Sbjct: 461 PDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDALRAFIRACRTHG 509



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 190/425 (44%), Gaps = 55/425 (12%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q ++ L+ +      + PD  + +    +C  L +   G QLH++ ++ G      V + 
Sbjct: 105 QHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLNDVESGRQLHSFVMKIGFDLDCFVGSA 164

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           ++  Y         +  FS I   D+  W                               
Sbjct: 165 VVDFYAKCGLYEDARLAFSCILYRDLVLW------------------------------- 193

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTK 216
           N M+  C  N      I +FR M     + D+++F+S+LS+C   G  E G+QLH L+ K
Sbjct: 194 NVMLYCCVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIK 253

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
             F   + V ++L+ +Y    N+ DA KVF+E      + +S+  M+ G       +EA+
Sbjct: 254 QSFDLDILVASSLVNVYAKNDNLYDARKVFDEMPTR--NSVSWTTMIVGYGQHEYGKEAV 311

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGY--------QVHAQAMKSGFEAYTSVSNA 328
             FR ML     P ELTF S++S+C     G+        QVH+  +K GFEA+ S++N 
Sbjct: 312 KLFRRMLRKDYCPDELTFASLLSSC-----GFTSGASELMQVHSCLIKLGFEAFLSINNG 366

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I  YS CG I  A   F  + E D+V+W ++I   A   L + A+  + +M S GIRPD
Sbjct: 367 LIYAYSKCGIIAAALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLSYGIRPD 426

Query: 389 EFTFGSLLAS---SGFIEMVEMIHAFVFING---IITNIQVSNALISAYAKNERIKQAYQ 442
           +  F  +L++    GF+ M   +H F  +     ++ + +    LI    +   + QA+ 
Sbjct: 427 KIAFLGVLSACSHGGFVSM--GLHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLDQAFD 484

Query: 443 IFHNM 447
           +  +M
Sbjct: 485 LLKSM 489


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/663 (28%), Positives = 344/663 (51%), Gaps = 15/663 (2%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           + A+ ++ G       +N  ++ +    DLV   +VF ++   +  S    +S   K G 
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +  A E+FD M +R    +  +I G  ++        L+ +M +  +  D  +  ++LS 
Sbjct: 90  LSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS- 148

Query: 199 CDAGLLEFGR---QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              G LE      Q+H+ V K G+   + V N+L+  Y     +  A ++F+       D
Sbjct: 149 -GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNK--D 205

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            +++N +M G ++ G  EEA+  F ++  + ++PS+ TF +++SA +     + G QVH 
Sbjct: 206 TVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K+ F     V NA +  YS   ++DE   +F  + E D +S+N +I++YA     + 
Sbjct: 266 FVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKE 325

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           +   + ++Q       +F F +LL+   SS  + M   IH      G     +V NAL+ 
Sbjct: 326 SFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVD 385

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK    K+A +IF N++ ++ + W  +I+ ++  G   +G+  FS++  + +  D+ T
Sbjct: 386 MYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQAT 445

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
            +  L +CA ++S+  G+Q+H  ++++  +S +  G+A++  YAKCG +  +++ F  M 
Sbjct: 446 FASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP 505

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           E++++SWNALISAYAQ+G     ++ F+ M   G  KPD  +F +VLSACSH G V++  
Sbjct: 506 ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSG-YKPDSVSFLSVLSACSHCGFVEEAL 564

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
             F+SM   Y   P  +H + M+D+L R G  DEAE+++     +     W ++ ++C  
Sbjct: 565 WHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624

Query: 670 HGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
           H N  L +  A  L   E  + +  Y+ +SNIYA AG W+  A +++ ++  GV K P  
Sbjct: 625 HKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAY 684

Query: 729 SWI 731
           SW+
Sbjct: 685 SWV 687



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 203/450 (45%), Gaps = 47/450 (10%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +   S  G  ++A+ LF+++H+S  +KP  ++ +  L+A   L +  FG Q+H 
Sbjct: 207 VTFNSLMTGYSNEGLNEEAIELFLELHNS-GIKPSDFTFAALLSAAVGLDDTKFGQQVHG 265

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
           + L+        V N +L  Y                               +K   VD 
Sbjct: 266 FVLKTNFVWNVFVGNALLDYY-------------------------------SKHDQVDE 294

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
             ++F +MP+ D   YN +IT    NG       LFR++      R  + FA++LS+  +
Sbjct: 295 VGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATS 354

Query: 202 GL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISY 259
            L L  GRQ+H      G +    V NAL+ MY  C    +A K+F+      C   + +
Sbjct: 355 SLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD---NIACKSTVPW 411

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMK 316
             M+      G+ EE +  F DM    +   + TF S++ AC       +G Q+H+  ++
Sbjct: 412 TAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIR 471

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SGF +     +A +  Y+ CG + +A   F  + E++ VSWN +IS YAQ       + +
Sbjct: 472 SGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNS 531

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
           + +M   G +PD  +F S+L++    GF+ E +   ++   I  +    +   +++    
Sbjct: 532 FQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLC 591

Query: 433 KNERIKQAYQIFHNM--SPRNIITWNTLIN 460
           +N R  +A ++   M   P  I+ W++++N
Sbjct: 592 RNGRFDEAEKLMTEMPFEPSEIM-WSSVLN 620



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 143/351 (40%), Gaps = 46/351 (13%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N+ + + + +G ++++  LF ++  + +     +  +T L+   +  N   G Q+H 
Sbjct: 308 ISYNVVITSYAWNGQFKESFDLFRKLQFT-RFDRRQFPFATLLSIATSSLNLRMGRQIHC 366

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            A+  G      V N ++ +Y         +++F  I       WT  +SA  + G  + 
Sbjct: 367 QAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEE 426

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
              VF  M    +P   A              I L R                       
Sbjct: 427 GINVFSDMRRTGVPADQATFASILRACANLASISLGR----------------------- 463

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
                  QLHSL+ +SGF   V   +AL+  Y  CG + DA K F E      + +S+N 
Sbjct: 464 -------QLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPER--NSVSWNA 514

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRVGYQV-HAQAMKSGF 319
           ++   A  G V+  L  F+ M+ +  +P  ++F+SV+SAC  C  V   + H  +M   +
Sbjct: 515 LISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIY 574

Query: 320 EA------YTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST 363
           E       YTS+    + +    G+ DEA  +   +  E   + W++++++
Sbjct: 575 EVTPKREHYTSM----VDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNS 621



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 34/231 (14%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII------------- 453
           +I A +   G   N   SN  ++ + +   +  A+Q+F  M  +N I             
Sbjct: 29  LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88

Query: 454 ------------------TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
                             +W  LI G+L +    +  + ++++    + PD  TL   LS
Sbjct: 89  KLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLS 148

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
               + +     QIH +V+K      + + N+++  Y K   L  + ++F  M+ KDT++
Sbjct: 149 GFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVT 208

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
           +N+L++ Y+  G  +EA+  F  + + G IKP   TF A+LSA    GL D
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSG-IKPSDFTFAALLSAA--VGLDD 256


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 188/565 (33%), Positives = 295/565 (52%), Gaps = 41/565 (7%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITM--YFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMD 264
           +Q+HSL+ K+G +  V V + LI        G++  A  +FEE + +   ++  +N ++ 
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
           G +       +L  F  ML   ++P+  TF  +  +C   +    G Q+HA A+K     
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFAR-------------------------------LQ 350
              V  + I MY+S G++D A ++F +                               + 
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIP 224

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEM 407
            KD+VSWN MIS Y Q      AI+ + EMQ   + P++ T   +L++ G     E+ + 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           I ++V  NG  +N+Q++NALI  Y K      A ++F  +  +++I+WNT+I G+     
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGN 526
             + L  F  +L S ++P++ T    L +CA + +L  GK +H Y+ KN    S  SL  
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +YAKCG ++ + RVF  M  ++  SWNA++S +A HG  + A++ F  M + G  +
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFR 464

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  TF  VLSAC+ AGLVD G + F SM+ DYG  P   H  CM+DLL RA   +EAE 
Sbjct: 465 PDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEI 524

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           ++ +  ++     W +L SAC AHG +  G  +A  L + E +    +VLLSNIYA AG 
Sbjct: 525 LMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGR 584

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W++ A IR  L   G+ K PGC+ I
Sbjct: 585 WDDVARIRTRLNDKGMKKVPGCTSI 609



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 233/461 (50%), Gaps = 27/461 (5%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+ ++      +C   +    G QLHA+AL+  L   PHV  +++ +Y +  ++   +
Sbjct: 127 VQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFAR 186

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VF +    D  S+T  ++     G +D A  +FD++P +D+  +NAMI+G  ++G  + 
Sbjct: 187 LVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEE 246

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCD---AGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            I  F EM + +V  +  +   VLS C    +G  E G+ + S V  +GF   + + NAL
Sbjct: 247 AIVCFYEMQEANVLPNKSTMVVVLSACGHTRSG--ELGKWIGSWVRDNGFGSNLQLTNAL 304

Query: 230 ITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           I MY  CG    A ++F+  E K    D IS+N M+ G + +   EEAL  F  ML +++
Sbjct: 305 IDMYCKCGETDIARELFDGIEEK----DVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360

Query: 288 RPSELTFVSVMSACLC---PRVGYQVHAQAMKS-GFEAYTSVSNAAITMYSSCGKIDEAC 343
           +P+++TF+ ++ AC C     +G  VHA   K+    +  S+  + I MY+ CG I+ A 
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLLASSGFI 402
            +F  +  +++ SWN M+S +A       A+  + EM + G+ RPD+ TF  +L++    
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQA 480

Query: 403 EMVEMIHAF----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
            +V++ H +    +   GI   +Q    +I   A+ E+ ++A  +  NM     +  +  
Sbjct: 481 GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME----MEPDGA 536

Query: 459 INGFLLNGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
           I G LL+     G   F E +   + +L P+     V LS+
Sbjct: 537 IWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSN 577


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 203/681 (29%), Positives = 337/681 (49%), Gaps = 43/681 (6%)

Query: 58  YSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
           +  S+ L ACA   N   G ++H   ++ GL     V  ++L +Y +             
Sbjct: 100 FIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGD------------- 146

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
                             +G +  A +VFD M  RDL  ++++I+   +NG    G+ +F
Sbjct: 147 ------------------LGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMF 188

Query: 178 REMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           R +   DV  D+ +  S+   C + G L   + +H  + +        + +AL+ MY  C
Sbjct: 189 RLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRC 248

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
            +   A ++F     +     S+  M+         ++AL  F +ML   + P+ +T ++
Sbjct: 249 DDFSSAERIFSNM--FNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMA 306

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+S+C      R G  VH  A+K       S+  A I  Y+  GK+     +   + +++
Sbjct: 307 VLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRN 366

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHA 410
           I+SWN +IS YA + L + A+  +++MQ  G  PD F+  S +   A+ G + +   IH 
Sbjct: 367 IISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHG 426

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           +     I+    V N+LI  Y+K   +  AY IF  +  ++++ WN++I GF   G  ++
Sbjct: 427 YAIKRHILDEF-VQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLE 485

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ F ++ ++ L  +E T   A+ +C+ +  L  GK +H  ++   +   + +  A+I 
Sbjct: 486 AIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALID 545

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCGDL  + RVF+ M E+  +SW+A+I     HG+   A+S F  M     +KP+  
Sbjct: 546 MYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQ-REMKPNDI 604

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  +LSACSH+G V++G   F+SM N +   P  +H +CM+DLL RAG LDEA R+INS
Sbjct: 605 TFMNILSACSHSGYVEEGKFYFNSMKN-FEVEPNLEHFACMVDLLSRAGDLDEAYRIINS 663

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
               A +  W AL + C  H  + + R I   LL+   D    Y LLSNIYA  G W+ +
Sbjct: 664 MPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDTGYYTLLSNIYAEEGNWDVS 723

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R  +K  G+ K PG S I
Sbjct: 724 RKVRSAMKGIGLKKVPGYSTI 744



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 224/458 (48%), Gaps = 13/458 (2%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           LHS +  +G          LI  Y   G +  +  VFE  +    D   + V++      
Sbjct: 20  LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNP--DSFMWAVLIKCHVWS 77

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVS 326
               EA+  +  M+   +  S+  F SV+ AC       VG +VH + +K G +    V 
Sbjct: 78  NFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVE 137

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + + MY   G +  A  +F  +  +D+VSW+++IS Y         +  +  + S  + 
Sbjct: 138 TSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVE 197

Query: 387 PDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D  T  S+  + G   F+ + + +H  +    I T   +++AL+  Y++ +    A +I
Sbjct: 198 LDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERI 257

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F NM  R+I +W  +I+ +  + +  Q LQ F E+L  ++ P+  T+   LSSCA  + L
Sbjct: 258 FSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLL 317

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R GK +H Y +K+  +   SLG A+I  YA+ G L    +V + + +++ ISWN LIS Y
Sbjct: 318 REGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVY 377

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A  G  KEA+  F  MQ  G+I PD  + ++ +SAC++ GL+  G +I    +  +  I 
Sbjct: 378 ASQGLFKEALGIFVQMQRQGQI-PDSFSLSSSISACANVGLLWLGHQIHGYAIKRH--IL 434

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            E   + ++D+  + G++D A  + +   IQ++S   W
Sbjct: 435 DEFVQNSLIDMYSKCGHVDLAYLIFD--RIQSKSVVAW 470



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 134/541 (24%), Positives = 242/541 (44%), Gaps = 43/541 (7%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G   + L +F ++  S  ++ D  ++ +   AC  L        +H   +R  ++    
Sbjct: 178 NGESSEGLEMF-RLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGP 236

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           + + ++ +Y    D  S +R+FS + N  + SWT                          
Sbjct: 237 LNDALVLMYSRCDDFSSAERIFSNMFNRSIASWT-------------------------- 270

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
                AMI+    + +    + +F EM +  V  +  +  +VLS C    LL  G+ +H 
Sbjct: 271 -----AMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHC 325

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
              K       S+  ALI  Y   G +    KV         + IS+N+++   AS G  
Sbjct: 326 YAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKR--NIISWNMLISVYASQGLF 383

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           +EAL  F  M      P   +  S +SAC       +G+Q+H  A+K        V N+ 
Sbjct: 384 KEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILD-EFVQNSL 442

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I MYS CG +D A +IF R+Q K +V+WN+MI  ++Q      AI  + +M    +  +E
Sbjct: 443 IDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNE 502

Query: 390 FTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            TF + + +    G +E  + +H  +   G+  ++ +  ALI  YAK   ++ A+++F +
Sbjct: 503 VTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDS 562

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           MS R++++W+ +I G  ++G     +  F+E++  E++P++ T    LS+C+    +  G
Sbjct: 563 MSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEG 622

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQ 565
           K     +    +   +     M+ L ++ GDLD + R+ N M    +   W AL++    
Sbjct: 623 KFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRI 682

Query: 566 H 566
           H
Sbjct: 683 H 683



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 187/387 (48%), Gaps = 18/387 (4%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           ++ +  +C   R    +H+  + +G       S   I  YS  G +  + ++F   Q  D
Sbjct: 4   YMPLFRSCTSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPD 63

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHA 410
              W  +I  +   N    AI  Y +M    I   +F F S+L A +GF  +++ E +H 
Sbjct: 64  SFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHG 123

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +   G+  +  V  +L+  Y     +  A ++F NM+ R++++W+++I+ ++ NG   +
Sbjct: 124 RIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSE 183

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
           GL+ F  L+  ++  D  T+     +C  +  LR  K +HG +++  + ++  L +A++ 
Sbjct: 184 GLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVL 243

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y++C D   + R+F+ M  +   SW A+IS Y +    K+A+  F  M +  ++ P+  
Sbjct: 244 MYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEF-KVAPNAV 302

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMV-----NDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           T  AVLS+C+   L+ +G  +    V     +D    PA      +++   + G L   E
Sbjct: 303 TIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPA------LIEYYAQFGKLSYCE 356

Query: 646 RVINSQHIQARS-DNWWALFSACAAHG 671
           +V+++  I  R+  +W  L S  A+ G
Sbjct: 357 KVLHT--IGKRNIISWNMLISVYASQG 381



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 9/211 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   S+ G+  +A+ LF Q++ +  L  +  +  T + AC+++ +   G  LH   +
Sbjct: 471 NSMICGFSQIGNSLEAIRLFDQMYLN-CLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLI 529

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G+K    +   ++ +Y    DL    RVF  +    V SW+  +  C   G +D A  
Sbjct: 530 AYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAIS 589

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           +F +M  R++      +  +++ C+ +GY + G   F  M   +V  +   FA ++ +  
Sbjct: 590 LFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLS 649

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
            AG L+   + + ++    F    S+  AL+
Sbjct: 650 RAGDLD---EAYRIINSMPFPAEASIWGALL 677


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 192/702 (27%), Positives = 349/702 (49%), Gaps = 39/702 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G ++ A  +F ++     L P++ ++ + L  C+N      G  +H   ++ GL     V
Sbjct: 323 GAWEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSV 381

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + ++S+Y                               +K+G +D A  +F  + ++  
Sbjct: 382 VSALVSMY-------------------------------SKLGDLDSAVFLFSSVTEKSQ 410

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
            ++N++I+G   N   ++ +G  R M    V  D  +  SV+S C     L  G+ +H+ 
Sbjct: 411 LLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAY 470

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             +S      SV+NAL+ MY +CG +   CK+F   +  V   IS+N ++ G A  G   
Sbjct: 471 AVRSRLELNESVMNALLAMYADCGQLSICCKLFHTME--VRTLISWNTIISGFAENGDSV 528

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAI 330
             L  F  M +A ++   +T ++++S+        VG  VH+ A++SG     SV+NA I
Sbjct: 529 ACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALI 588

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           TMY++CG I     +F  L   + +S+N +++ Y + NL +  +  +  M     +P+  
Sbjct: 589 TMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNII 648

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           T  +LL         + +H++   N       +  + I  Y++   ++  + +F  +  R
Sbjct: 649 TLLNLLPICHSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGER 708

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N I WN +++  +          +F ++    ++ D  T+   +S+C+++      + + 
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVT 768

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
              L+      + + NA+I ++++CG +  + ++F++ +EKD++SW+ +I+AY+ HG+G 
Sbjct: 769 AIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGG 828

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            A+  F  M   G IKPD  TF +VLSACS +G ++ G  +F SM+ D+G  P  +H +C
Sbjct: 829 SALDLFLMMVSTG-IKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYAC 887

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLLGR G+LDEA  ++ +   +       +L  AC  HGN +LG  +  +L E +   
Sbjct: 888 MVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHGN 947

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
           P  YV+LSNIYA+AG W +   +R  ++  G+IK  G S IG
Sbjct: 948 PRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSLIG 989



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 156/583 (26%), Positives = 274/583 (46%), Gaps = 44/583 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           LNI++   S  G +++ L L+ ++ +      D ++    + ACA +     G ++H   
Sbjct: 112 LNIAVRCFSDHGFHRELLGLYREVCA---FGSDNFTFPPVIRACAAVSCLRLGKEVHCRV 168

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +R G      V   +L +Y  +  +   +RVF  +++ D+ SW                 
Sbjct: 169 VRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWN---------------- 212

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAG 202
                          AMI+G + NG         ++M +   R +  S   ++S V   G
Sbjct: 213 ---------------AMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLG 257

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           + + G  LH+   KSG     SV  A I+MY   G++  +  +F ++   V + +S N M
Sbjct: 258 VRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQS--LVDNLVSCNSM 315

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           +      G  E+A   FR M    L P+ +T VS++  C        G  VH   +K G 
Sbjct: 316 ISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGL 375

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               SV +A ++MYS  G +D A  +F+ + EK  + WN++IS Y   N     + +   
Sbjct: 376 AEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRR 435

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ  G+ PD  T  S+++     E + +   IHA+   + +  N  V NAL++ YA   +
Sbjct: 436 MQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQ 495

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +    ++FH M  R +I+WNT+I+GF  NG  V  L+ F ++ +++++ D  TL   +SS
Sbjct: 496 LSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISS 555

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + I  +  G+ +H   +++     +S+ NA+IT+Y  CG +    ++F+ +   +TIS+
Sbjct: 556 LSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISY 615

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           NAL++ Y ++   KE +  F  M    + KP+  T   +L  C
Sbjct: 616 NALMTGYRKNNLFKEILPLFYHMIKNDQ-KPNIITLLNLLPIC 657



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 189/384 (49%), Gaps = 9/384 (2%)

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           SVV   +  Y   G    A  VF        +    N+ +   +  G   E L  +R+  
Sbjct: 77  SVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYRE-- 134

Query: 284 VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           V +      TF  V+ AC    C R+G +VH + +++G      V  A + MY+  G++D
Sbjct: 135 VCAFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVD 194

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG---SLLA 397
            +  +F  ++ +D++SWN MIS Y+       A  A  +MQ  G RP+  +     S+++
Sbjct: 195 LSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVS 254

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             G  +  + +HAF   +G++ +  V+ A IS YA    +  +  +FH     N+++ N+
Sbjct: 255 GLGVRDAGDPLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNS 314

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I+  + +G   +    F  +    L P+  T+   L  C+    + HG+ +HG V+K  
Sbjct: 315 MISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFG 374

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L  ++S+ +A++++Y+K GDLD ++ +F+ + EK  + WN+LIS Y  + +    +   +
Sbjct: 375 LAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVR 434

Query: 578 AMQDVGRIKPDQATFTAVLSACSH 601
            MQ  G + PD  T  +V+S C H
Sbjct: 435 RMQIEG-VDPDALTVISVISKCRH 457


>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
 gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 183/619 (29%), Positives = 330/619 (53%), Gaps = 12/619 (1%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D  +++  LS   K G +  A ++F+++P RD+  ++ MI G   NG+    + LF +M 
Sbjct: 25  DPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMR 84

Query: 182 KLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              +   +++   VL S+   G    G+ +H L+ K G      VV AL+  Y  CGNVV
Sbjct: 85  ISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVV 144

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           D+ +VFE+ +      +S + ++ G       EEA++ F       + P+  T ++++ A
Sbjct: 145 DSYRVFEQLENP--GLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRA 202

Query: 301 CLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C+     R+   +H   +K       +V+N+ + MYSS   +D A  +F  ++ +D++SW
Sbjct: 203 CVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISW 262

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFI 414
            TMI+          A++ + +M++ GI  D     +L+++    G ++    IH    +
Sbjct: 263 TTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIV 322

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
            G  + + ++N++I+ Y+K   +  +  +F   + +++++W  +I G + NG+P + L+ 
Sbjct: 323 CGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKL 382

Query: 475 FSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
             ++   E    D   L   LS+   ++ L   +Q+H Y  ++       + N++I+ Y+
Sbjct: 383 LIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNSLISAYS 442

Query: 534 KCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           KCGD++ +  VF  M   +D +SWNA+++ Y  +G G+ AV+ +  M+  GR  PD AT+
Sbjct: 443 KCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRK-GRENPDAATY 501

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             VLSACSH+GLVDDG  IF+ MV +    P++DH  C++DLL RAG   +A   ++   
Sbjct: 502 LCVLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFSDAREFVSRYM 561

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
            +   + W AL S C  HGN+ L  + A  + E + ++P   VLLSN+YA+ G +++A  
Sbjct: 562 EKMGPNAWRALLSGCQLHGNVGLAELAARRVCELDPEEPGQVVLLSNVYASVGRFQDAEA 621

Query: 713 IRELLKRTGVIKQPGCSWI 731
           +R  +K+  +IK PG S +
Sbjct: 622 LRASMKKKELIKNPGISLL 640



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 144/569 (25%), Positives = 263/569 (46%), Gaps = 61/569 (10%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K  ++  +I +   +R+G  + ++ LF Q+  S  L P  +++   L + A L +   G 
Sbjct: 54  KRDVVSWSIMIHGYNRNGFRRKSMELFSQMRIS-SLVPTSFTMVGVLVSIAGLGDPVLGQ 112

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H   L+ GL +   V   +L+ Y    ++V   RVF +++NP + S +  +S      
Sbjct: 113 CVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRVFEQLENPGLVSCSAIVSGF---- 168

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
                             VYN +        +E+  + LF +  KL +  +  +  +++ 
Sbjct: 169 ------------------VYNEL--------FEE-AVVLFNQFRKLGMVPNAATVLTLIR 201

Query: 198 VCDAGLLEFGR---QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
            C A  LE  R    +H +V K      V+V N+++ MY +  ++  A +VFE   G  C
Sbjct: 202 ACVA--LESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFE---GMEC 256

Query: 255 -DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQV 310
            D IS+  M++ L  +    +AL+ FR M    +    +  ++++SAC      + G ++
Sbjct: 257 RDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREI 316

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H QA+  GF +   ++N+ I MYS CG +D +  +F +   K +VSW  MI    Q    
Sbjct: 317 HTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYP 376

Query: 371 RSAILAYLEMQ-SVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNA 426
           R A+   ++M+       D      +L++SG    +E+ + +H + F +G      V N+
Sbjct: 377 REALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRLVQNS 436

Query: 427 LISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           LISAY+K   ++ AY +F  M   R+I++WN ++NG+ +NG     +  + E+      P
Sbjct: 437 LISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRENP 496

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGDLD 539
           D  T    LS+C+       G    G V+ N ++ + ++  +      ++ L A+ G   
Sbjct: 497 DAATYLCVLSACS-----HSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFS 551

Query: 540 CSLRVFNMMIEK-DTISWNALISAYAQHG 567
            +    +  +EK    +W AL+S    HG
Sbjct: 552 DAREFVSRYMEKMGPNAWRALLSGCQLHG 580



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 125/506 (24%), Positives = 215/506 (42%), Gaps = 70/506 (13%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +++A+ LF Q      + P+  ++ T + AC  L +      +H   ++  L     V N
Sbjct: 174 FEEAVVLFNQFRK-LGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNN 232

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           ++L +Y +  DL +  RVF  ++  DV SWTT +                          
Sbjct: 233 SVLDMYSSMLDLDAATRVFEGMECRDVISWTTMI-------------------------- 266

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
            N ++  C E  Y    + LFR+M    +  D     +++S C   G L+ GR++H+   
Sbjct: 267 -NLLV--CLE--YASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAI 321

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
             GF   + + N++I MY  CG++  +  VF++  G     +S+  M+ G    G   EA
Sbjct: 322 VCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGK--SLVSWTAMILGCVQNGYPREA 379

Query: 276 ---LIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQVHAQAMKSGFEAYTSV 325
              LI+ R     S     +  + V+SA        LC     Q+H  A +SGF  Y  V
Sbjct: 380 LKLLIKMRGE--ESFYLDSIMLIGVLSASGELALLELCQ----QLHCYAFESGFPRYRLV 433

Query: 326 SNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
            N+ I+ YS CG ++ A  +F ++   +DIVSWN +++ Y     G  A+  Y EM+   
Sbjct: 434 QNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGR 493

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERIK 438
             PD  T+  +L++     +V+     V  N ++    +  +      ++   A+     
Sbjct: 494 ENPDAATYLCVLSACSHSGLVD--DGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFS 551

Query: 439 QAYQI----FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            A +        M P     W  L++G  L+G    GL   +   + EL P+E    V L
Sbjct: 552 DAREFVSRYMEKMGPN---AWRALLSGCQLHGN--VGLAELAARRVCELDPEEPGQVVLL 606

Query: 495 SSC-ARISSLRHGKQIHGYVLKNNLI 519
           S+  A +   +  + +   + K  LI
Sbjct: 607 SNVYASVGRFQDAEALRASMKKKELI 632



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 124/315 (39%), Gaps = 62/315 (19%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G+ ++AL L +++        D   L   L+A   L       QLH YA  +G   Y 
Sbjct: 372 QNGYPREALKLLIKMRGEESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYR 431

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N+++S Y    D+     VF +                  MG++            R
Sbjct: 432 LVQNSLISAYSKCGDVEPAYNVFGQ------------------MGYI------------R 461

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC------DAGLLEF 206
           D+  +NA++ G   NG+ +I + L+ EM K     D  ++  VLS C      D GL+ F
Sbjct: 462 DIVSWNAILNGYGINGHGEIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIF 521

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD---ACKVFEEAKGYVCDHI------ 257
            + +     +                  +CG +VD       F +A+ +V  ++      
Sbjct: 522 NQMVEERTIRPSQD--------------HCGCIVDLLARAGCFSDAREFVSRYMEKMGPN 567

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
           ++  ++ G    G V  A +  R   V  L P E   V ++S  +   VG    A+A+++
Sbjct: 568 AWRALLSGCQLHGNVGLAELAARR--VCELDPEEPGQVVLLSN-VYASVGRFQDAEALRA 624

Query: 318 GFEAYTSVSNAAITM 332
             +    + N  I++
Sbjct: 625 SMKKKELIKNPGISL 639


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 173/565 (30%), Positives = 295/565 (52%), Gaps = 51/565 (9%)

Query: 208 RQLHSLVTKSGF----SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +Q+H+ + +S      S LV +V +   +  +    +    +  + + ++C     N  +
Sbjct: 40  KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLC-----NRFL 94

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----GYQVHAQAMKSG 318
             L+     E+ L+ +  M    L     +F  ++ A    RV     G ++H  A K G
Sbjct: 95  RELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKAL--SRVKSLVEGLEIHGLAAKLG 152

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F++   V    + MY++CG+I EA ++F ++  +D+V+W+ MI  Y Q  L   A+L + 
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIIT---------------- 419
           EM++  + PDE    ++L++   +G +   +MIH F+  N I+                 
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272

Query: 420 ---------------NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
                          N+  S A+++ Y+K  +I+ A  +F+ M  ++++ W+ +I+G+  
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           +  P + L  F+E+    ++PD+ T+   +++CA + +L   K IH +V KN     + +
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI 392

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            NA+I +YAKCG L+ + R+F+ M  K+ ISW  +ISA+A HG+   A+  F  M+D   
Sbjct: 393 NNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMED-EN 451

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           I+P+  TF  VL ACSHAGLV++G +IF SM+N++   P   H  CM+DL GRA  L EA
Sbjct: 452 IEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREA 511

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
             ++ +  +      W +L +AC  HG + LG   A  LLE + D    +V LSNIYA A
Sbjct: 512 LELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKA 571

Query: 705 GLWEEAANIRELLKRTGVIKQPGCS 729
             WE+   +R+L+K  G+ K+ GCS
Sbjct: 572 RRWEDVGQVRKLMKHKGISKERGCS 596



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 136/522 (26%), Positives = 250/522 (47%), Gaps = 49/522 (9%)

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL-----SACTKMGHVDYACEVFD 147
           H  +T+ S   +A  L  +K+V ++I    +   T+ L     S+C     +DYA  VF+
Sbjct: 21  HSHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFN 80

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AGLLE 205
            +P  +  + N  +   + +   +  + ++  M    +  D +SF  +L        L+E
Sbjct: 81  LIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G ++H L  K GF     V   L+ MY  CG + +A  +F+  K +  D +++++M+DG
Sbjct: 141 -GLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFD--KMFHRDVVTWSIMIDG 197

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
               G   +AL+ F +M   ++ P E+   +V+SAC        G  +H   M++     
Sbjct: 198 YCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVD 257

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-------------------------------E 351
             + +A +TMY+SCG +D A  +F ++                                +
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVK 317

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMI 408
           KD+V W+ MIS YA+ +  + A+  + EMQS+GI+PD+ T  S++   A  G ++  + I
Sbjct: 318 KDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWI 377

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H FV  NG    + ++NALI  YAK   +++A +IF  M  +N+I+W  +I+ F ++G  
Sbjct: 378 HLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDA 437

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNA 527
              L+ F ++    + P+  T    L +C+    +  G++I +  + ++N+  K      
Sbjct: 438 GSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGC 497

Query: 528 MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGE 568
           M+ L+ +   L  +L +   M +  + I W +L++A   HGE
Sbjct: 498 MVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGE 539



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 225/510 (44%), Gaps = 72/510 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L  LSRS   +  L ++ ++ +   L  D +S    L A + +++   G ++H  A 
Sbjct: 91  NRFLRELSRSEEPEKTLLVYERMRT-QGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAA 149

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  + P V   ++ +Y                            +AC   G +  A  
Sbjct: 150 KLGFDSDPFVQTGLVRMY----------------------------AAC---GRIAEARL 178

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
           +FDKM  RD+  ++ MI G  ++G  +  + LF EM   +V  D    ++VLS C  AG 
Sbjct: 179 MFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGN 238

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE------------AKG 251
           L +G+ +H  + ++       + +AL+TMY +CG++  A  +FE+              G
Sbjct: 239 LSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTG 298

Query: 252 YV-----------------CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           Y                   D + ++ M+ G A     +EAL  F +M    ++P ++T 
Sbjct: 299 YSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTM 358

Query: 295 VSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           +SV++AC       Q   +H    K+GF     ++NA I MY+ CG ++ A  IF ++  
Sbjct: 359 LSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPR 418

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMI 408
           K+++SW  MIS +A      SA+  + +M+   I P+  TF G L A S  G +E    I
Sbjct: 419 KNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI 478

Query: 409 HAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
              +     IT   V    ++  + +   +++A ++   M    N+I W +L+    ++G
Sbjct: 479 FYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSS 496
               G   F+   + EL PD     V LS+
Sbjct: 539 EIELG--EFAAKRLLELDPDHDGAHVFLSN 566


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 179/535 (33%), Positives = 298/535 (55%), Gaps = 13/535 (2%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G  LH++  K+     V V N ++ +Y  C  + +A +VF+E      + +S++ M+
Sbjct: 19  LRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER--NLVSWSAMI 76

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G   +G    AL  F  +   ++ P+E  + SV+SAC   +    G Q+H QA+K G +
Sbjct: 77  SGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLD 133

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           + + VSNA ITMY  CGK  +A + +    E + V++N +I+ + +             M
Sbjct: 134 SVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDKGFEVLRMM 193

Query: 381 QSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
              G  PD FTF  LL    S   ++  E++H       + +   + N +I+ Y+K   +
Sbjct: 194 YQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLL 253

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSS 496
           ++A + F ++  +++I+WNT I+         + L+ F E+L    +RPDE+T + AL++
Sbjct: 254 EEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAA 313

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C+ ++S+ +GKQIHG++++  L   +  GNA+I +YAKCG +  +  +F+ M  ++ +SW
Sbjct: 314 CSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSW 373

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N +I+ +  HG G +A   F  M+ +G +KPD  TF  +L+A +HAGLVD+G   F+SM 
Sbjct: 374 NTMIAGFGNHGFGGKAFELFAKMKTMG-VKPDSVTFVGLLTASNHAGLVDEGLVYFNSME 432

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             YG  P  +H SC++DLLGRAG L+EA+  +        +    +L SAC  HG++  G
Sbjct: 433 ETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTG 492

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +  A  LL+ +    S YVLLSN+YA+  +W+  A   +LLK +G+ K+PG S I
Sbjct: 493 KCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGHSLI 547



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 150/513 (29%), Positives = 243/513 (47%), Gaps = 48/513 (9%)

Query: 67  CANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSW 126
           C+  +    G  LHA A++   ++   V+N IL+LY   R L   +              
Sbjct: 13  CSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREAR-------------- 58

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
                            +VFD+M +R+L  ++AMI+G  + G     +GLF    KL++ 
Sbjct: 59  -----------------QVFDEMSERNLVSWSAMISGYEQIGEPISALGLFS---KLNIV 98

Query: 187 RDNYSFASVLSVCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
            + Y +ASV+S C +  GL++ G+Q+H    K G   +  V NALITMY  CG   DA  
Sbjct: 99  PNEYVYASVISACASLKGLVQ-GKQIHGQALKFGLDSVSFVSNALITMYMKCGKCSDALL 157

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
            + EA     + ++YN ++ G     + ++     R M      P   TFV ++  C   
Sbjct: 158 AYNEA--LELNPVAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSR 215

Query: 305 ---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
              + G  +H Q +K    +   + N  ITMYS    ++EA   F  ++EKD++SWNT I
Sbjct: 216 DDLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFI 275

Query: 362 STYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLAS-SGFIEMV--EMIHAFVFINGI 417
           S+ +  N    A+ A+ EM     +RPDEFTF S LA+ SG   M   + IH  +    +
Sbjct: 276 SSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRL 335

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             ++   NALI+ YAK   I +AY IF  M  +N+++WNT+I GF  +GF  +  + F++
Sbjct: 336 YQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAK 395

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCG 536
           +    ++PD  T    L++      +  G      + +   IS ++   + +I L  + G
Sbjct: 396 MKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAG 455

Query: 537 DLDCSLRVFNMM-IEKDTISWNALISAYAQHGE 568
            L+ +           DT+   +L+SA   HG+
Sbjct: 456 RLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGD 488



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 54/421 (12%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G    AL LF +++    + P+ Y  ++ ++ACA+L+    G Q+H  AL+ GL +   V
Sbjct: 83  GEPISALGLFSKLN----IVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSFV 138

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +N ++++Y                                K G    A   +++  + + 
Sbjct: 139 SNALITMY-------------------------------MKCGKCSDALLAYNEALELNP 167

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSL 213
             YNA+ITG  EN   D G  + R M++     D ++F  +L  C++   L+ G  LH  
Sbjct: 168 VAYNALITGFVENQQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQ 227

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             K   +    + N +ITMY     + +A K F   +    D IS+N  +   +     E
Sbjct: 228 TIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEK--DLISWNTFISSCSHCNDHE 285

Query: 274 EALIRFRDML-VASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSN 327
           +AL  F++ML    +RP E TF S ++AC     +C   G Q+H   +++         N
Sbjct: 286 KALEAFKEMLNECRVRPDEFTFASALAACSGLASMCN--GKQIHGHLIRTRLYQDVGAGN 343

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MY+ CG I +A  IF++++ +++VSWNTMI+ +     G  A   + +M+++G++P
Sbjct: 344 ALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKP 403

Query: 388 DEFTFGSLLASSGFIEMVEMIHAFVFIN------GIITNIQVSNALISAYAKNERIKQAY 441
           D  TF  LL +S    +V+     V+ N      GI   I+  + LI    +  R+ +A 
Sbjct: 404 DSVTFVGLLTASNHAGLVD--EGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAK 461

Query: 442 Q 442
           +
Sbjct: 462 E 462



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           +  C++  +LR G  +H   +K    S + + N ++ LYAKC  L  + +VF+ M E++ 
Sbjct: 10  IHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNL 69

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLV 605
           +SW+A+IS Y Q GE   A+  F  +     I P++  + +V+SAC S  GLV
Sbjct: 70  VSWSAMISGYEQIGEPISALGLFSKLN----IVPNEYVYASVISACASLKGLV 118



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +++ S    ++ AL  F ++ +  +++PD ++ ++ LAAC+ L +   G Q+H
Sbjct: 268 LISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEFTFASALAACSGLASMCNGKQIH 327

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +R  L       N ++++Y     +     +FS++++ ++ SW T ++     G   
Sbjct: 328 GHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSKMEHQNLVSWNTMIAGFGNHGFGG 387

Query: 141 YACEVFDKMP----DRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
            A E+F KM       D   +  ++T     G  D G+  F  M +
Sbjct: 388 KAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEE 433


>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
            [Brachypodium distachyon]
          Length = 1430

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/549 (33%), Positives = 276/549 (50%), Gaps = 47/549 (8%)

Query: 227  NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            NAL++ +   G   DA  +F        D  SYN ++  LA   R  +AL+    M    
Sbjct: 830  NALLSAHARLGRPADARALFHAIPDP--DQCSYNAVIAALAQHSRGADALLFLAAMHADD 887

Query: 287  LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
               +  +F S +SAC      R G QVHA   KS       + +A + MY+ C   +EA 
Sbjct: 888  FVLNAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEAR 947

Query: 344  MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFI 402
             +F  + E++IVSWN++I+ Y Q      A++ ++ M   G  PDE T  S++ A +G  
Sbjct: 948  RVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLA 1007

Query: 403  EMVE--MIHA-----------FVFINGIIT---------------------NIQVSNALI 428
               E   +HA            V  N ++                      ++    +LI
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLI 1067

Query: 429  SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
            + YA++  ++ A  +F  M  +N+I WN LI  +  NG   + L+ F  L    + P  Y
Sbjct: 1068 TGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHY 1127

Query: 489  TLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSL 542
            T    L++C  ++ L+ G+Q H +VLK          S + +GN+++ +Y K G +D   
Sbjct: 1128 TYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGA 1187

Query: 543  RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +VF  M  +D +SWNA+I  +AQ+G  K+A+  F+ M    +  PD  T   VLSAC H+
Sbjct: 1188 KVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERML-CSKESPDSVTMIGVLSACGHS 1246

Query: 603  GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
            GLV++G R F SM  D+G IP++DH +CM+DLLGRAG+L E E +I    ++  +  W +
Sbjct: 1247 GLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWAS 1306

Query: 663  LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
            L  +C  H N+ +G   AG L E +      YVLLSN+YA  G W +   +R  +K  GV
Sbjct: 1307 LLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGV 1366

Query: 723  IKQPGCSWI 731
             KQPGCSWI
Sbjct: 1367 SKQPGCSWI 1375



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 183/606 (30%), Positives = 294/606 (48%), Gaps = 48/606 (7%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           L+AC   G V  A E+FD MP RD   +NA+IT  +  G+    + LF  M+ L +R  +
Sbjct: 95  LAAC---GSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151

Query: 190 YSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            + ASVLS C   L L   RQLH  + K  F   V +  AL+ +Y NC  + DA + F++
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDD 211

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPR 305
                 + IS+NV++      G  + A+  F  ML A +RP   T    + AC       
Sbjct: 212 I--LEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALE 269

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYS------------------------------- 334
            G  +HA  ++ G+E +  V ++ + MY+                               
Sbjct: 270 EGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLA 329

Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
           SCG+I +A  +F  ++E+++VSWN M++ Y +      A+L + +M+      D  T GS
Sbjct: 330 SCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGS 389

Query: 395 LL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI--FHNMSP 449
           +L A +G +++   E +HAF    G  ++  + NAL+  Y+K   ++ A ++  F   S 
Sbjct: 390 VLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSE 449

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R+  +WN+LI+G+  +      L   +++  SE+ P++ T S AL++CA I  L+ G QI
Sbjct: 450 RDSYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQI 508

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H Y+++        L + +I +Y KC   D S+R+F     +D I WN++I   A  G+G
Sbjct: 509 HAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKG 568

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           +  +  F  MQ  G IK D  TF   L +C   G V  G   F  M+ D   IP  +H  
Sbjct: 569 EYGLDLFDEMQKQG-IKADSVTFLGALVSCISEGHVRLGRSYFTLMM-DESIIPRIEHYE 626

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
           CM++LLG+ G + E E  +     +  +  W  +F  C  +GN +LG   A  + +    
Sbjct: 627 CMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPL 686

Query: 690 KPSVYV 695
            P  +V
Sbjct: 687 TPVQFV 692



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 253/530 (47%), Gaps = 49/530 (9%)

Query: 84   LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
            L++   A   + NT++S Y     L   +RVF EI +P+ +S+   LSA  ++G    A 
Sbjct: 787  LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 144  EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
             +F  +PD D   YNA+I    ++      +     MH  D   + YSFAS LS C A  
Sbjct: 847  ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906

Query: 204  -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
                G Q+H+LV+KS  +  V + +AL+ MY  C    +A +VFE       + +S+N +
Sbjct: 907  DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPER--NIVSWNSL 964

Query: 263  MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG- 318
            +      G V EAL+ F  M+ A   P E+T  SVMSAC      R G QVHA+ +KS  
Sbjct: 965  ITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDR 1024

Query: 319  FEAYTSVSNAAITMYSSCGK-------------------------------IDEACMIFA 347
            F     +SNA + MY+ CG+                               +++A M+F+
Sbjct: 1025 FREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFS 1084

Query: 348  RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
            ++ EK++++WN +I+ YAQ      A+  ++ ++   + P  +T+G++L + G +  +++
Sbjct: 1085 QMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQL 1144

Query: 408  -----IH----AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
                 +H     F F  G  +++ V N+L+  Y K   I    ++F  M+ R+ ++WN +
Sbjct: 1145 GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAM 1204

Query: 459  INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN- 517
            I G   NG     L  F  +L S+  PD  T+   LS+C     +  G++    + +++ 
Sbjct: 1205 IVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHG 1264

Query: 518  LISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
            +I        MI L  + G L +    +  M +E D + W +L+ +   H
Sbjct: 1265 IIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 156/603 (25%), Positives = 264/603 (43%), Gaps = 76/603 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SR+GH  +AL LF  ++S   ++P   ++++ L+ CA   +     QLH +  +   ++ 
Sbjct: 127 SRAGHPSEALSLFSNMNSL-GIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSN 185

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             +   ++ +Y N   L   +R F +I  P+  SW                         
Sbjct: 186 VILGTALVDVYGNCFLLADARRAFDDILEPNAISW------------------------- 220

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA-SVLSVCDAGLLEFGRQL 210
                 N ++      G  D+ + +F  M    VR   Y+ + +VL+  D   LE GR +
Sbjct: 221 ------NVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCI 274

Query: 211 HSLVTKSGFSCLVSVVNALITMY------------FN-------------------CGNV 239
           H+ V + G+   V V ++++ MY            FN                   CG +
Sbjct: 275 HAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRI 334

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            DA +VFE  K    + +S+N M+ G      +  AL+ F+ M   +     +T  SV+S
Sbjct: 335 ADAKRVFEGMKER--NLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLS 392

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG--KIDEACMIFARLQEKDI 354
           AC   L    G +VHA A+K GF +   + NA + MYS CG  +  E  ++F    E+D 
Sbjct: 393 ACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDS 452

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAF 411
            SWN++IS Y + ++  +A+ A  +MQS  + P++ TF S LA+   I +++    IHA+
Sbjct: 453 YSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAY 511

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           +   G   +  + + LI  Y K  +   + +IF     R++I WN++I G   +G    G
Sbjct: 512 MIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYG 571

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+    ++ D  T   AL SC     +R G+     ++  ++I ++     MI L
Sbjct: 572 LDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDESIIPRIEHYECMIEL 631

Query: 532 YAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
             K G + +    V +M  E  T  W  +     ++G  K      K + D   + P Q 
Sbjct: 632 LGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQF 691

Query: 591 TFT 593
             T
Sbjct: 692 VAT 694



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 201/483 (41%), Gaps = 83/483 (17%)

Query: 25   NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
            N  +A L++     DAL     +H+      + YS ++ L+ACA  +++  G Q+HA   
Sbjct: 861  NAVIAALAQHSRGADALLFLAAMHAD-DFVLNAYSFASALSACAAEKDSRTGVQVHALVS 919

Query: 85   RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            ++      ++ + +L +Y         +RVF  +   ++ SW                  
Sbjct: 920  KSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSW------------------ 961

Query: 145  VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                         N++IT   +NG     + LF  M K     D  + ASV+S C AGL 
Sbjct: 962  -------------NSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSAC-AGLA 1007

Query: 205  --EFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCG------------------------ 237
                GRQ+H+ V KS  F   + + NAL+ MY  CG                        
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLI 1067

Query: 238  -------NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
                   NV DA  VF +      + I++NV++   A  G  EEAL  F  +   S+ P+
Sbjct: 1068 TGYARSANVEDAQMVFSQMVEK--NVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPT 1125

Query: 291  ELTFVSVMSAC---LCPRVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDE 341
              T+ +V++AC      ++G Q H   +K GF      E+   V N+ + MY   G ID+
Sbjct: 1126 HYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 1185

Query: 342  ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
               +F R+  +D VSWN MI  +AQ    + A+  +  M      PD  T   +L++ G 
Sbjct: 1186 GAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGH 1245

Query: 402  IEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWN 456
              +VE       +    +GII +      +I    +   +K+  ++   MS   + + W 
Sbjct: 1246 SGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWA 1305

Query: 457  TLI 459
            +L+
Sbjct: 1306 SLL 1308



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 183/385 (47%), Gaps = 45/385 (11%)

Query: 33   RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LKAY 91
            ++G   +AL LFV +  +    PD  +L++ ++ACA L     G Q+HA  +++   +  
Sbjct: 970  QNGPVGEALVLFVSMMKA-GFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRED 1028

Query: 92   PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
              ++N ++ +Y       + + VF  + +  V S T+ ++   +  +V+ A  VF +M +
Sbjct: 1029 MVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVE 1088

Query: 152  RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
            +++  +N +I    +NG E+  + LF  + +  V   +Y++ +VL+ C +   L+ G+Q 
Sbjct: 1089 KNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQA 1148

Query: 211  HSLVTKSGF------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
            H  V K GF         V V N+L+ MY   G++ D  KVFE       D++S+N M+ 
Sbjct: 1149 HVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIV 1206

Query: 265  GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS 324
            G A  GR ++AL  F  ML +   P  +T + V+SAC         H+  ++ G   + S
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSAC--------GHSGLVEEGRRYFRS 1258

Query: 325  VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQS 382
            ++     + S   +    CMI       D+              LGR+  L  +E  ++ 
Sbjct: 1259 MTEDHGIIPS---QDHYTCMI-------DL--------------LGRAGHLKEVEELIKE 1294

Query: 383  VGIRPDEFTFGSLLASSGFIEMVEM 407
            + + PD   + SLL S    + VEM
Sbjct: 1295 MSMEPDAVLWASLLGSCRLHKNVEM 1319



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/386 (24%), Positives = 181/386 (46%), Gaps = 43/386 (11%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
           T + N AI   ++CG + +A  +F  +  +D  SWN +I+  ++      A+  +  M S
Sbjct: 85  TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERI 437
           +GIRP + T  S+L+     E +++     +H  +      +N+ +  AL+  Y     +
Sbjct: 145 LGIRPKDATMASVLSCCA--ECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLL 202

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A + F ++   N I+WN ++  + L G     +  F  +L + +RP  YT+S A+ +C
Sbjct: 203 ADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLAC 262

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM---------- 547
              ++L  G+ IH +VL++     + + ++++ +YAKCG +D +  +FN+          
Sbjct: 263 RDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMST 322

Query: 548 ---------------------MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
                                M E++ +SWNA+++ Y +  +   A+  F+ M+   R +
Sbjct: 323 SIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETR-E 381

Query: 587 PDQATFTAVLSACSHAGLVDDGT-RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
            D  T  +VLSAC+  G++D G      +     GF  +    + ++ +  + G L  AE
Sbjct: 382 FDAITLGSVLSACT--GILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAE 439

Query: 646 RVINSQHIQAR-SDNWWALFSACAAH 670
           R++  +    R S +W +L S    H
Sbjct: 440 RLLLFEMGSERDSYSWNSLISGYERH 465



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 42/332 (12%)

Query: 425  NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE------- 477
            N L+SAYA+  R+  A ++F  +   N  ++N L++     G P      F         
Sbjct: 799  NTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARALFHAIPDPDQC 858

Query: 478  -------------------LLMSELRPDE-----YTLSVALSSCARISSLRHGKQIHGYV 513
                               L ++ +  D+     Y+ + ALS+CA     R G Q+H  V
Sbjct: 859  SYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKDSRTGVQVHALV 918

Query: 514  LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
             K+     + +G+A++ +YAKC   + + RVF  M E++ +SWN+LI+ Y Q+G   EA+
Sbjct: 919  SKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEAL 978

Query: 574  SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL--SCM 631
              F +M   G + PD+ T  +V+SAC+      +G ++   +V    F   ED +  + +
Sbjct: 979  VLFVSMMKAGFV-PDEVTLASVMSACAGLAADREGRQVHARVVKSDRF--REDMVLSNAL 1035

Query: 632  LDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
            +D+  + G    A  V +   + +RS  +  +L +  A   N+   +++   ++E+    
Sbjct: 1036 VDMYAKCGRTRAARCVFD--RMASRSVVSETSLITGYARSANVEDAQMVFSQMVEK---N 1090

Query: 691  PSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
               + +L   YA  G  EEA  +   LKR  V
Sbjct: 1091 VIAWNVLIAAYAQNGEEEEALRLFVRLKRESV 1122



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 6/160 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   R    + AL+   ++ S  ++ P+  + S+ LAACAN+     G Q+HAY +
Sbjct: 456 NSLISGYERHSMSEAALYALTKMQS--EVTPNQSTFSSALAACANIFLLKQGMQIHAYMI 513

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G +    + + ++ +Y   R      R+F    + DV  W + +  C   G  +Y  +
Sbjct: 514 RKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLD 573

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM 180
           +FD+M  +    D   +   +  C   G+  +G   F  M
Sbjct: 574 LFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLM 613



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 41/212 (19%)

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           LK+  +++  L N +++ YA+ G L  + RVF+ +   +T S+NAL+SA+A+ G   +A 
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
           + F A+ D     PDQ ++ AV++A +      D      +M  D               
Sbjct: 847 ALFHAIPD-----PDQCSYNAVIAALAQHSRGADALLFLAAMHAD--------------- 886

Query: 634 LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
                      + V+N+        ++ +  SACAA  + R G  +  L+ +    K  V
Sbjct: 887 -----------DFVLNAY-------SFASALSACAAEKDSRTGVQVHALVSKSPHAK-DV 927

Query: 694 YV--LLSNIYAAAGLWEEAANIRELLKRTGVI 723
           Y+   L ++YA     EEA  + E +    ++
Sbjct: 928 YIGSALLDMYAKCEWPEEARRVFEAMPERNIV 959


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 164/483 (33%), Positives = 269/483 (55%), Gaps = 9/483 (1%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSAC---LCPRVGYQV 310
           D +++N M+    +      AL  + +ML  S   P   TF S++  C   L  +VG  +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H Q +K    +   +    + MY++CG +  A  +F R+  ++ V W +MIS Y + +  
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNAL 427
             A+L Y +M+  G  PDE T  +L+++   ++ + +   +H+ +    +     + +AL
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPD 486
           ++ YAK   +K A Q+F  +S +++  W+ LI G++ N    + LQ F E+   S +RP+
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E T+   +S+CA++  L  G+ +H Y+ +      +SL N++I +++KCGD+D + R+F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  KD ISWN++++ +A HG G+EA++ F+ MQ    ++PD+ TF  VL+ACSHAGLV 
Sbjct: 342 SMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTD-LQPDEITFIGVLTACSHAGLVQ 400

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G ++F  +   YG     +H  CM+DLL RAG L EA   I    +Q     W ++  A
Sbjct: 401 EGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  + NL LG   A  LL+ E     VY+LLSNIYA   +W E   +REL+   G+ K P
Sbjct: 461 CRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGIQKTP 520

Query: 727 GCS 729
           GCS
Sbjct: 521 GCS 523



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 197/372 (52%), Gaps = 21/372 (5%)

Query: 317 SGFEAYTSVSNAAITMYSSCGK--IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +GF  +    N  I    S G   +  A  +FA  +E D+++WN+M+  +   N+ R A+
Sbjct: 4   TGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRAL 63

Query: 375 LAYLEM--QSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALIS 429
            +Y EM  +S  + PD FTF SLL     +   ++ +++H  V    + +++ +   L++
Sbjct: 64  QSYTEMLERSRNV-PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLN 122

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YA    +K A  +F  M  RN + W ++I+G++ N  P + L  + ++      PDE T
Sbjct: 123 MYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT 182

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           ++  +S+CA +  L  G ++H ++ + ++     LG+A++ +YAKCGDL  + +VF+ + 
Sbjct: 183 MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLS 242

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           +KD  +W+ALI  Y ++    EA+  F+ +     ++P++ T  AV+SAC+  G ++ G 
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG- 301

Query: 610 RIFDSMVNDYGFIPAEDHL----SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
                 V+DY     + H     + ++D+  + G +D A+R+ +S   +    +W ++ +
Sbjct: 302 ----RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI-SWNSMVN 356

Query: 666 ACAAHGNLRLGR 677
             A HG   LGR
Sbjct: 357 GFALHG---LGR 365



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 190/396 (47%), Gaps = 39/396 (9%)

Query: 17  SKEL-LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           ++EL +L  N  L     S   + AL  + ++    +  PD ++  + L  CA L     
Sbjct: 38  TRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKV 97

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  LH   ++  L +  ++  T+L++Y    DL S + +F                   +
Sbjct: 98  GKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE------------------R 139

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
           MGH             R+  V+ +MI+G  +N   +  + L+++M +     D  + A++
Sbjct: 140 MGH-------------RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186

Query: 196 LSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           +S C +   L  G +LHS + +        + +AL+ MY  CG++  A +VF++      
Sbjct: 187 VSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDK-- 244

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PRVGYQV 310
           D  +++ ++ G     R  EAL  FR++   S +RP+E+T ++V+SAC        G  V
Sbjct: 245 DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWV 304

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H    ++      S++N+ I M+S CG ID A  IF  +  KD++SWN+M++ +A   LG
Sbjct: 305 HDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLG 364

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           R A+  +  MQ+  ++PDE TF  +L +     +V+
Sbjct: 365 REALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQ 400



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++     ++P+  ++   ++ACA L +   G  +H Y  R        + N++
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP--- 155
           + ++    D+ + KR+F  +   D+ SW + ++     G    A   F  M   DL    
Sbjct: 324 IDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDE 383

Query: 156 -VYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLS-VCDAGLLEFGRQL 210
             +  ++T C+  G    G  LF E+  L  VR  +  +  ++  +C AGLL   R+ 
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF 441


>gi|297830768|ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329106|gb|EFH59525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 564

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/533 (33%), Positives = 296/533 (55%), Gaps = 14/533 (2%)

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H     +GF   + + + LI +Y   G+V  A K+F+       D +S+  M+   +  
Sbjct: 34  IHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKR--DVVSWTAMISRFSRC 91

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
           G   +AL+ F+ M    +R ++ T+ SV+ +C    C + G Q+     K        V 
Sbjct: 92  GYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVR 151

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A +++Y+ CGK+++A + F  ++E+D+VSWN+MI  Y       ++   +  M + G +
Sbjct: 152 SALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKK 211

Query: 387 PDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD FTFGSLL +S  ++ +E    +H      G   +  +  +L+ AY K   I  A+++
Sbjct: 212 PDCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKL 271

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPV-QGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
             + + R++I+   LI GF             F+E+++ + + DE  +S  L  C  I+S
Sbjct: 272 HEDTTKRDLISCTALITGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIAS 331

Query: 503 LRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +  G+QIHG+ LK++ I   ++LGN++I +YAK GD++ ++  F  M EKD  SW +LI+
Sbjct: 332 VTVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIA 391

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y +HG  ++A+  +  M+  G IKP+  TF ++LSACSH G  + G +IF+ M+N +G 
Sbjct: 392 GYGRHGNFEKAIDLYNRMEHEG-IKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGI 450

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQH--IQARSDNWWALFSACAAHGNLRLGRII 679
              E+H SC++D+L R+GYL+EA  +I S+   I   S  W A   AC  HGN++L ++ 
Sbjct: 451 KAREEHFSCIIDMLARSGYLEEAYELIRSKDGIISLSSSTWGAFLDACRRHGNVQLSKVA 510

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI-KQPGCSWI 731
           A  LL  E  KP  Y+ L++++AA G W+ A   R+L+K +G   K PG S +
Sbjct: 511 ASQLLSVEPKKPVNYINLASVHAANGAWDSALKTRQLMKESGSCNKTPGYSLV 563



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 229/451 (50%), Gaps = 25/451 (5%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G V +A ++FD++P RD+  + AMI+  +  GY    + LF++MH+ DVR + +++ S
Sbjct: 59  KQGDVKHARKLFDRIPKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGS 118

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL  C D G L+ G Q+   + K   +  + V +AL+++Y  CG + DA   F+  K   
Sbjct: 119 VLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRSALLSLYARCGKMEDARLQFDSMKER- 177

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA-----CLCPRVGY 308
            D +S+N M+DG  +   V+ +   F+ M     +P   TF S++ A     CL P VG 
Sbjct: 178 -DLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKPDCFTFGSLLRASIVVKCLEP-VG- 234

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+H  A+K GF   +++  + +  Y  CG I  A  +     ++D++S   +I+ +AQ+N
Sbjct: 235 QLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQQN 294

Query: 369 LGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT-NIQV 423
           +  S A   + EM  +  + DE    S+L     I  V +   IH F   +  I  +I +
Sbjct: 295 ICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDIAL 354

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N+LI  YAK+  I+ A   F  M  +++ +W +LI G+  +G   + +  ++ +    +
Sbjct: 355 GNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGI 414

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +P++ T    LS+C+       G +I   ++ K+ + ++    + +I + A+ G L+   
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLE--- 471

Query: 543 RVFNMMIEKDTI------SWNALISAYAQHG 567
             + ++  KD I      +W A + A  +HG
Sbjct: 472 EAYELIRSKDGIISLSSSTWGAFLDACRRHG 502



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 214/467 (45%), Gaps = 48/467 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  SR G+++DAL LF Q+H    ++ + ++  + L +C +L     G Q+     +  
Sbjct: 85  ISRFSRCGYHRDALLLFKQMHR-QDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGK 143

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V + +LSLY                                + G ++ A   FD
Sbjct: 144 CAGNLIVRSALLSLY-------------------------------ARCGKMEDARLQFD 172

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL--SVCDAGLLE 205
            M +RDL  +N+MI G T N   D    LF+ M     + D ++F S+L  S+    L  
Sbjct: 173 SMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGKKPDCFTFGSLLRASIVVKCLEP 232

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G QLH L  K GF    +++ +L+  Y  CG++ +A K+ E+      D IS   ++ G
Sbjct: 233 VG-QLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKR--DLISCTALITG 289

Query: 266 LASVGR-VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEA 321
            A       +A   F +M++   +  E+   S++  C       VG Q+H  A+KS    
Sbjct: 290 FAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIR 349

Query: 322 Y-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  ++ N+ I MY+  G I++A + F  ++EKD+ SW ++I+ Y +      AI  Y  M
Sbjct: 350 FDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM----IHAFVFINGIITNIQVSNALISAYAKNER 436
           +  GI+P++ TF SLL++       E+     +  +  +GI    +  + +I   A++  
Sbjct: 410 EHEGIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGY 469

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           +++AY++    S   II+ ++   G  L+     G    S++  S+L
Sbjct: 470 LEEAYELIR--SKDGIISLSSSTWGAFLDACRRHGNVQLSKVAASQL 514



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 105/192 (54%), Gaps = 1/192 (0%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           +IH     NG  +N+Q+++ LI  Y K   +K A ++F  +  R++++W  +I+ F   G
Sbjct: 33  LIHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSRCG 92

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +    L  F ++   ++R +++T    L SC  +  L+ G QI G + K      + + +
Sbjct: 93  YHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAGNLIVRS 152

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+++LYA+CG ++ +   F+ M E+D +SWN++I  Y  +     + S F+ M   G+ K
Sbjct: 153 ALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAEGK-K 211

Query: 587 PDQATFTAVLSA 598
           PD  TF ++L A
Sbjct: 212 PDCFTFGSLLRA 223


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 162/531 (30%), Positives = 290/531 (54%), Gaps = 9/531 (1%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR  H  + ++  +    + N+++ MY  CG++ DA KVF+E +    + +S+N ++   
Sbjct: 29  GRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRER--NLVSWNTIISAY 86

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
           A  G  ++    F +ML    +P+  T++  + + L P    +G Q+H+ A++SG  +  
Sbjct: 87  AENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNA 146

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SV+ A   MY  CG ++ A ++F ++ EK+ V+W  ++  Y Q      A+  + +M + 
Sbjct: 147 SVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNE 206

Query: 384 GIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+  DE+ F  +L +   +E +     IH  +   G+ + + V   L+  Y K   ++ A
Sbjct: 207 GVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESA 266

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            + F  +S  N ++W+ LI G+   G   + L+ F  L    +  + +T +    +C+ +
Sbjct: 267 TKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSAL 326

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           +    G Q H   +K++L++     +AMIT+Y++CG LD + RVF  + + D ++W A+I
Sbjct: 327 ADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAII 386

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           + YA  G   EA+  F+ MQD G ++P+  TF AVL+ACSH+GLV +G +  +SM ++YG
Sbjct: 387 AGYAYQGNAPEALKLFRRMQDCG-VRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYG 445

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
                DH  CM+D+  RAG+L EA  +I S      + +W  L   C  + NL +G + A
Sbjct: 446 VATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAA 505

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L + + +  + Y+L+ N+YA+ G W+EAAN+R+++    + K+  CSWI
Sbjct: 506 ENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWI 556



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 209/452 (46%), Gaps = 47/452 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  + +G +     +F  +    + KP+  +    L +  N      G Q+H
Sbjct: 76  LVSWNTIISAYAENGVFDKGFCMFSNMLEL-ETKPNGSTYIGFLRSLLNPSGLEIGKQIH 134

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++A+R+GL +   V   I ++Y                                K G ++
Sbjct: 135 SHAIRSGLGSNASVNTAISNMY-------------------------------VKCGWLE 163

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VF+KM +++   +  ++ G T+   +   + LF +M    V  D Y F+ VL  C 
Sbjct: 164 GAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC- 222

Query: 201 AGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           AGL  L FGRQ+H  + K G    VSV   L+  Y  C N+  A K FE       + +S
Sbjct: 223 AGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISE--PNDVS 280

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           ++ ++ G   +G  EEAL  F  +   S+  +  T+ S+  AC        G Q HA A+
Sbjct: 281 WSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAI 340

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           KS   AY    +A ITMYS CG++D A  +F  + + D V+W  +I+ YA +     A+ 
Sbjct: 341 KSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALK 400

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS---SGF-IEMVEMIHAFVFINGIITNIQVSNALISAY 431
            +  MQ  G+RP+  TF ++L +   SG  IE  + + +     G+ T I   + ++  Y
Sbjct: 401 LFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIY 460

Query: 432 AKNERIKQAYQIFHNM--SPRNIITWNTLING 461
           ++   +++A ++  +M  SP + ++W  L+ G
Sbjct: 461 SRAGFLQEALELIRSMPFSP-DAMSWKCLLGG 491



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 214/462 (46%), Gaps = 16/462 (3%)

Query: 113 RVFSE-----IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           R+F E     ++NP  +   + L    K G +  A +VFD+M +R+L  +N +I+   EN
Sbjct: 30  RLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAEN 89

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVV 226
           G  D G  +F  M +L+ + +  ++   L S+ +   LE G+Q+HS   +SG     SV 
Sbjct: 90  GVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVN 149

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            A+  MY  CG +  A  VFE+      + +++  +M G     R  +AL  F  M+   
Sbjct: 150 TAISNMYVKCGWLEGAELVFEKMSEK--NAVAWTGIMVGYTQAERQMDALALFAKMVNEG 207

Query: 287 LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           +   E  F  V+ AC        G Q+H   +K G E+  SV    +  Y  C  ++ A 
Sbjct: 208 VELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESAT 267

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFI 402
             F  + E + VSW+ +I+ Y Q      A+  +  +++  +  + FT+ S+  A S   
Sbjct: 268 KAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALA 327

Query: 403 EMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           +       HA    + ++      +A+I+ Y++  R+  A ++F ++   + + W  +I 
Sbjct: 328 DFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIA 387

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLI 519
           G+   G   + L+ F  +    +RP+  T    L++C+    +  G+Q    +  N  + 
Sbjct: 388 GYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVA 447

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALI 560
           + +   + M+ +Y++ G L  +L +  +M    D +SW  L+
Sbjct: 448 TTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 154/340 (45%), Gaps = 45/340 (13%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DAL LF ++  +  ++ D Y  S  L ACA L    FG Q+H + ++ GL++   V   +
Sbjct: 195 DALALFAKM-VNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPL 253

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +  Y    +L S  + F  I  P+  SW+  ++   +MG  + A + F+ +  R + +  
Sbjct: 254 VDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDI-- 311

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTK 216
                                        +++++ S+   C A L +F  G Q H+   K
Sbjct: 312 -----------------------------NSFTYTSIFQACSA-LADFNSGAQAHADAIK 341

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           S         +A+ITMY  CG +  A +VFE       D +++  ++ G A  G   EAL
Sbjct: 342 SSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD--PDAVAWTAIIAGYAYQGNAPEAL 399

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS--NAAIT 331
             FR M    +RP+ +TF++V++AC    +   G Q + ++M S +   T++   +  + 
Sbjct: 400 KLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQ-YLESMSSNYGVATTIDHYDCMVD 458

Query: 332 MYSSCGKIDEACMIFARLQ-EKDIVSWNTMI-STYAQRNL 369
           +YS  G + EA  +   +    D +SW  ++   +  RNL
Sbjct: 459 IYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNL 498


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 208/705 (29%), Positives = 349/705 (49%), Gaps = 63/705 (8%)

Query: 52  KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
           +++P+ ++L   + AC+ L N A G ++H+       +    + N ++S+Y     L+  
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP---DRDLPVYNAMITGCTENG 168
           K                               + FD++P    RD+  +NAMI+    NG
Sbjct: 62  K-------------------------------QAFDRLPRASKRDVVTWNAMISAFLRNG 90

Query: 169 YEDIGIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLL--EFGRQLHSLVTKSGFSCLVS 224
                + LFR+M H      ++ +F SVL  C +AGLL  E  R +H  +  +G      
Sbjct: 91  SAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAF 150

Query: 225 VVNALITMYFNCGNVVDACKVF-----EEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
           V  AL+  Y   G++ DA +VF     EE    +   ++ + M+      G  +E+L  F
Sbjct: 151 VRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL---VTCSAMISACWQNGWPQESLRLF 207

Query: 280 RDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSV-SNAAITMYSS 335
             M +   +PS +T VSV++AC    VG     V  QAM+       +V     +T Y+ 
Sbjct: 208 YAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 267

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GS 394
              +  A   F  +Q  D+VSWN M + Y Q +  R A++ +  M   G+RP   TF  +
Sbjct: 268 SNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITA 327

Query: 395 LLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
           L A + +         + I + +   G+  +  V+NA ++ YAK   +  A  +F  +SP
Sbjct: 328 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 387

Query: 450 --RNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL-RPDEYTLSVALSSCARISSLRHG 506
             R+ ITWN+++  +  +G   +  + F  +   +L +P++ T    L +    +S+  G
Sbjct: 388 TRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 447

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYA 564
           ++IH  V+ N   S   + NA++ +YAKCG LD +  +F+     ++D I+W +L++ YA
Sbjct: 448 REIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYA 507

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
           Q+G+ + A+  F  MQ  G ++P+  TF + L+AC+H G ++ G  +   M  D+G +PA
Sbjct: 508 QYGQAERALKLFWTMQQQG-VRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPA 566

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
             H SC++DLLGR G LDEAE+++  +  QA    W AL  AC     L  G   A  ++
Sbjct: 567 SKHFSCIVDLLGRCGRLDEAEKLLE-RTSQADVITWMALLDACKNSKELERGERCAERIM 625

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + + +  S Y++L+++YAAAG W EAA IR+ +   G+   PGCS
Sbjct: 626 QLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 670



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 252/514 (49%), Gaps = 27/514 (5%)

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
           ++VR + ++  ++++ C   G L  GR++HS ++   F     + NALI+MY  CG+++D
Sbjct: 1   MEVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLID 60

Query: 242 ACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS 299
           A + F+   +    D +++N M+      G   EAL  FRDM    +  P+ +TFVSV+ 
Sbjct: 61  AKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLD 120

Query: 300 AC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD- 353
           +C     L       +H + + +G E    V  A +  Y   G +D+A  +F R  +++ 
Sbjct: 121 SCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEP 180

Query: 354 ---IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
              +V+ + MIS   Q    + ++  +  M   G +P   T  S+L +   +  V    A
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLP-VGSATA 239

Query: 411 FVF------INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           FV       ++    N+ +   L++ YA++  + +A   F  +   ++++WN +   +L 
Sbjct: 240 FVLEQAMEVVSATRDNV-LGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQ 298

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH---GKQIHGYVLKNNLISK 521
           +  P + L  F  +L+  +RP   T   AL++CA          GK+I   + +  L   
Sbjct: 299 HHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGD 358

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            ++ NA + +YAKCG L  +  VF  +    +D I+WN++++AY  HG GKEA   F+AM
Sbjct: 359 TAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAM 418

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +    +KP++ TF AVL A +    +  G  I   +V++ GF       + +L++  + G
Sbjct: 419 EAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCG 477

Query: 640 YLDEAERVIN-SQHIQARSDNWWALFSACAAHGN 672
            LD+A+ + + S   Q     W +L +  A +G 
Sbjct: 478 SLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQ 511



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 224/483 (46%), Gaps = 57/483 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  Q++L LF  ++     KP   +L + L AC+ L     G+   A+ L   ++   
Sbjct: 196 QNGWPQESLRLFYAMNL-EGTKPSGVTLVSVLNACSML---PVGSAT-AFVLEQAMEVVS 250

Query: 93  H-----VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 +  T+L+ Y  + DL   +  F  IQ+PDV SW                     
Sbjct: 251 ATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSW--------------------- 289

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-- 205
                     NAM     ++      + LF  M    VR    +F + L+ C A   +  
Sbjct: 290 ----------NAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTA 339

Query: 206 --FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G+++ SL+ ++G     +V NA + MY  CG++ DA  VFE       D I++N M+
Sbjct: 340 SAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSML 399

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
                 G  +EA   F+ M    L +P+++TFV+V+ A         G ++HA+ + +GF
Sbjct: 400 AAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGF 459

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFAR--LQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           E+ T + NA + MY+ CG +D+A  IF +    ++D+++W ++++ YAQ      A+  +
Sbjct: 460 ESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLF 519

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
             MQ  G+RP+  TF S L +    G +E   E++      +GI+   +  + ++    +
Sbjct: 520 WTMQQQGVRPNHITFISALTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGR 579

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
             R+ +A ++    S  ++ITW  L++    N   ++  +  +E +M +L P+  +  + 
Sbjct: 580 CGRLDEAEKLLERTSQADVITWMALLDA-CKNSKELERGERCAERIM-QLDPEVASSYIV 637

Query: 494 LSS 496
           L+S
Sbjct: 638 LAS 640



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 108/260 (41%), Gaps = 51/260 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA     G  ++A  LF  + +   +KP+  +    L A  +  + A G ++HA  +
Sbjct: 396 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 455

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G ++   + N +L++Y                                K G +D A  
Sbjct: 456 SNGFESDTVIQNALLNMY-------------------------------AKCGSLDDAQA 484

Query: 145 VFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-A 201
           +FDK      D+  + +++ G  + G  +  + LF  M +  VR ++ +F S L+ C+  
Sbjct: 485 IFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHG 544

Query: 202 GLLEFGRQL-------HSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           G LE G +L       H +V  S  FSC+V ++         CG + +A K+ E  +   
Sbjct: 545 GKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLG-------RCGRLDEAEKLLE--RTSQ 595

Query: 254 CDHISYNVMMDGLASVGRVE 273
            D I++  ++D   +   +E
Sbjct: 596 ADVITWMALLDACKNSKELE 615


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 177/540 (32%), Positives = 292/540 (54%), Gaps = 34/540 (6%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHI----------SYNVMMDGLASVGRVEE 274
           V+  LI   F    ++  C + E      C +I          S+NV + G        E
Sbjct: 2   VLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPRE 61

Query: 275 ALIRFRDML-VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           A++ ++ +L     +P   T+  +  AC      R+G ++    +  GF++   VSNA I
Sbjct: 62  AVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVI 121

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            +  SCG +D A  +F +   +D+VSWN+MI+ Y +R     A+  Y EM+  GI+PDE 
Sbjct: 122 HLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEV 181

Query: 391 TFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T   +++S   +E +++    H ++  NG+   + ++NAL+  Y K   ++ A ++F +M
Sbjct: 182 TMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSM 241

Query: 448 S----------------PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           +                 ++++ WN +I G++      + L  F+E+    + PDE T+ 
Sbjct: 242 TNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMV 301

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             LS+C+++ +L  G  IH Y+ K+ L   ++LG A+I +YAKCG +  +++VF  +  +
Sbjct: 302 SCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR 361

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           ++++W A+IS  A HG    A++ F  M D   + PD+ TF  +LSAC H GLV++G + 
Sbjct: 362 NSLTWTAIISGLALHGNAHGAIAYFSEMID-NSVMPDEVTFLGLLSACCHGGLVEEGRKY 420

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           F  M + +   P   H SCM+DLLGRAG L+EAE +I S  I+A +  W ALF AC  HG
Sbjct: 421 FSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ +G   A  LL+ +     +YVLL+N+Y  A +W+EA   R+L+++ GV K PGCS I
Sbjct: 481 NVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSSI 540



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 229/462 (49%), Gaps = 28/462 (6%)

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNY 190
           A ++   +DY   +     + +   +N  I G  ++      + L++ + + D  + DNY
Sbjct: 21  AISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNY 80

Query: 191 SFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           ++  +   C    L+  G ++   V   GF   + V NA+I +  +CG++  A K+F+  
Sbjct: 81  TYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFD-- 138

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
           K  V D +S+N M++G    G   EAL  +R+M V  ++P E+T + V+S+C       +
Sbjct: 139 KSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDL 198

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA----------------CMIFARLQ 350
           G + H    ++G +    ++NA + MY  CG ++ A                 M+F  + 
Sbjct: 199 GRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMP 258

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEM 407
           +KD+V WN MI  Y   N G+ A+  + EMQ++ I PDE T  S L++    G +++   
Sbjct: 259 DKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW 318

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH ++  + +  N+ +  ALI  YAK  +I +A Q+F  +  RN +TW  +I+G  L+G 
Sbjct: 319 IHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 378

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV-LKNNLISKMSLGN 526
               + +FSE++ + + PDE T    LS+C     +  G++    +  K NL  K+   +
Sbjct: 379 AHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYS 438

Query: 527 AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHG 567
            M+ L  + G L+ +  +  +M IE D + W AL  A   HG
Sbjct: 439 CMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 220/510 (43%), Gaps = 66/510 (12%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           NT        N+++     S + ++A+ L+ ++      KPD Y+      ACA L    
Sbjct: 37  NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 96

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G+++  + L  G  +   V+N ++ L                            L +C 
Sbjct: 97  MGSEILGHVLHLGFDSDIFVSNAVIHL----------------------------LVSC- 127

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
             G +D A ++FDK   RDL  +N+MI G    G+    +  +REM    ++ D  +   
Sbjct: 128 --GDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIG 185

Query: 195 VLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           V+S C A L  L+ GR+ H  + ++G    V + NAL+ MY  CGN+  A K+F+     
Sbjct: 186 VVSSC-AQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNK 244

Query: 253 VC--------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
                           D + +N M+ G     R +EAL  F +M   ++ P E+T VS +
Sbjct: 245 TMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 304

Query: 299 SACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           SAC       VG  +H    K       ++  A I MY+ CGKI +A  +F  L  ++ +
Sbjct: 305 SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 364

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE-----MVEM 407
           +W  +IS  A       AI  + EM    + PDE TF  LL++    G +E       +M
Sbjct: 365 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 424

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNG 466
              F     +   ++  + ++    +   +++A ++  +M    + + W  L     ++G
Sbjct: 425 SSKF----NLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 480

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             + G +  S+LL  ++ P +  + V L++
Sbjct: 481 NVLMGERAASKLL--QMDPHDSGIYVLLAN 508


>gi|297611068|ref|NP_001065556.2| Os11g0109800 [Oryza sativa Japonica Group]
 gi|77548352|gb|ABA91149.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125533131|gb|EAY79679.1| hypothetical protein OsI_34825 [Oryza sativa Indica Group]
 gi|125575946|gb|EAZ17168.1| hypothetical protein OsJ_32674 [Oryza sativa Japonica Group]
 gi|255679705|dbj|BAF27401.2| Os11g0109800 [Oryza sativa Japonica Group]
          Length = 748

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 212/695 (30%), Positives = 335/695 (48%), Gaps = 54/695 (7%)

Query: 55  PDIYSLSTTLAACANL-----RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           P+ +SL+T L AC ++             LH  A+RAGL + P V +++L +Y     + 
Sbjct: 88  PNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIA 147

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           + +R F+ I+N                               +DL  +NAM+ G   NG+
Sbjct: 148 AAQRAFAHIRN-------------------------------KDLTCWNAMLEGYVLNGF 176

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
               I     MH   +  D Y++ S +  C  +   + GRQLH LV  S      SV+N+
Sbjct: 177 GHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNS 236

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MYF       A  VF + +    D +S+N M+ G A     +       DM     +
Sbjct: 237 LVDMYFRARQKETAASVFRKIRQK--DTVSWNTMISGFAHDEDDKAVFGCLIDMSRIGCK 294

Query: 289 PSELTFVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+E+TF  ++    A     +G Q+ A A + G+     V+NA I M S CG ++ A   
Sbjct: 295 PNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVLVANAVINMLSRCGLLNRAYGF 354

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F  L   +IV+WN MI+ Y   +     +  +  +   G RPDEFT+ ++L  S F E  
Sbjct: 355 FCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCFGERPDEFTYSAVL--SAFQEAQ 412

Query: 406 -----EMIHAFVFINGIITNIQVSNALISA-YAKNERIKQAYQIFHNMSPRNIITWNTLI 459
                E IHA +   G  +   VS +LI A  A    ++ + +I  +     +++W  +I
Sbjct: 413 GARDHEQIHATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVI 472

Query: 460 NGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           + FL +G   + +  F+     S  +PDE+ L+  L++CA  + +RH + IH  VLK   
Sbjct: 473 SAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGH 532

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEAVSCF 576
                + +A++  YAKCG++  +   F ++     D I +N +++AYA HG   EA++ +
Sbjct: 533 SKHFCVASAVVDAYAKCGEITSAESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLY 592

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M    ++ P  ATF A+LSACSH GLV+ G  +F +M++ YG  PA  + +C++DLL 
Sbjct: 593 EEMTK-AKLSPTPATFVAILSACSHLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLA 651

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           R G LDEA+ VI++   Q     W +L   C  HGN +LG + A  +L         Y+ 
Sbjct: 652 RKGLLDEAKGVIDAMPFQPWPAVWRSLVIGCRIHGNKQLGVLAAEQILRMAPSSDGAYIS 711

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LSN+YA  G W+ A   R  + +  V K  G S I
Sbjct: 712 LSNVYADDGEWQSAEETRRRMVQNHVQKLQGYSRI 746



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 253/524 (48%), Gaps = 16/524 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G +D A +VFD+MP R+L  + AM++  T NG   +G   F  M +     + +S A+
Sbjct: 36  RRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFRFFVSMIRSGFCPNEFSLAT 95

Query: 195 VLSVCDAGL------LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +L+ C + +      L     LH +  ++G      V ++L+ MY   G +  A + F  
Sbjct: 96  MLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHGRIAAAQRAFAH 155

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
            +    D   +N M++G    G    A+     M  + L P   T++S + AC       
Sbjct: 156 IRNK--DLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDRYTYISAVKACSISAQWD 213

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+H   + S  E+ TSV N+ + MY    + + A  +F ++++KD VSWNTMIS +A
Sbjct: 214 LGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSWNTMISGFA 273

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
                ++     ++M  +G +P+E TF  LL  SG  E   +   I A  + +G   N+ 
Sbjct: 274 HDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVALAYRHGYTDNVL 333

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V+NA+I+  ++   + +AY  F +++  NI+TWN +I G+ L     + ++ F  L+   
Sbjct: 334 VANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMKLFRSLVCFG 393

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL-YAKCGDLDCS 541
            RPDE+T S  LS+       R  +QIH  +LK    S   +  ++I    A  G +  S
Sbjct: 394 ERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFVSTSLIKANVAAFGSVQIS 453

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           L++     + + +SW  +ISA+ +HG   E +  F   +     KPD+     VL+AC++
Sbjct: 454 LKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACAN 513

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           A L+    R   S+V   G        S ++D   + G +  AE
Sbjct: 514 AALIRH-CRCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITSAE 556



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 138/571 (24%), Positives = 245/571 (42%), Gaps = 62/571 (10%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           GH+  A+   + +H S  L PD Y+  + + AC+       G QLH   + + L++   V
Sbjct: 177 GHH--AIRTVLLMHHS-GLAPDRYTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSV 233

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N+++ +Y  AR   +   VF +I+  D  SW                            
Sbjct: 234 MNSLVDMYFRARQKETAASVFRKIRQKDTVSW---------------------------- 265

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSL 213
              N MI+G   +  +    G   +M ++  + +  +F+ +L +  A   E  G Q+ +L
Sbjct: 266 ---NTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVAL 322

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-----DHISYNVMMDGLAS 268
             + G++  V V NA+I M   CG       +   A G+ C     + +++N M+ G   
Sbjct: 323 AYRHGYTDNVLVANAVINMLSRCG-------LLNRAYGFFCSLTSTNIVTWNEMIAGYGL 375

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSV 325
               EE +  FR ++    RP E T+ +V+SA       R   Q+HA  +K GF +   V
Sbjct: 376 FSHSEETMKLFRSLVCFGERPDEFTYSAVLSAFQEAQGARDHEQIHATILKQGFASCQFV 435

Query: 326 SNAAITM-YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY-LEMQSV 383
           S + I    ++ G +  +  I     + ++VSW  +IS + +  L    I  + L     
Sbjct: 436 STSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLNDEVIFLFNLFRGDS 495

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
             +PDEF   ++L   A++  I     IH+ V   G   +  V++A++ AYAK   I  A
Sbjct: 496 TNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSKHFCVASAVVDAYAKCGEITSA 555

Query: 441 YQIFHNMS--PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
              F  +S    + I +NT++  +  +G   + L  + E+  ++L P   T    LS+C+
Sbjct: 556 ESAFTVVSSGTDDAILYNTMLTAYANHGLIHEALNLYEEMTKAKLSPTPATFVAILSACS 615

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM-IEKDTISW 556
            +  +  GK +   +L    +       A ++ L A+ G LD +  V + M  +     W
Sbjct: 616 HLGLVEQGKLVFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPWPAVW 675

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            +L+     HG  +  V    A + + R+ P
Sbjct: 676 RSLVIGCRIHGNKQLGV---LAAEQILRMAP 703



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/407 (23%), Positives = 188/407 (46%), Gaps = 15/407 (3%)

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
           +N L+  Y   G +  A KVF+E      + +S+  M+      G        F  M+ +
Sbjct: 27  MNHLLIYYARRGLLDSALKVFDEMPQR--NLVSWTAMVSASTGNGAPHLGFRFFVSMIRS 84

Query: 286 SLRPSELTFVSVMSACLCP--------RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
              P+E +  ++++AC            +   +H  A+++G ++   V ++ + MY+  G
Sbjct: 85  GFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSLLLMYAKHG 144

Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
           +I  A   FA ++ KD+  WN M+  Y     G  AI   L M   G+ PD +T+ S + 
Sbjct: 145 RIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDRYTYISAVK 204

Query: 398 S---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           +   S   ++   +H  V  + + +N  V N+L+  Y +  + + A  +F  +  ++ ++
Sbjct: 205 ACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVS 264

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+I+GF  +           ++     +P+E T SV L       +   G QI     
Sbjct: 265 WNTMISGFAHDEDDKAVFGCLIDMSRIGCKPNEVTFSVLLRLSGAKENESLGLQIVALAY 324

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           ++     + + NA+I + ++CG L+ +   F  +   + ++WN +I+ Y      +E + 
Sbjct: 325 RHGYTDNVLVANAVINMLSRCGLLNRAYGFFCSLTSTNIVTWNEMIAGYGLFSHSEETMK 384

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            F+++   G  +PD+ T++AVLSA   A    D  +I  +++   GF
Sbjct: 385 LFRSLVCFGE-RPDEFTYSAVLSAFQEAQGARDHEQIHATILKQ-GF 429



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 164/337 (48%), Gaps = 10/337 (2%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G  A+T   N  +  Y+  G +D A  +F  + ++++VSW  M+S             
Sbjct: 17  KLGTLAHTFNMNHLLIYYARRGLLDSALKVFDEMPQRNLVSWTAMVSASTGNGAPHLGFR 76

Query: 376 AYLEMQSVGIRPDEFTFGSLLA--------SSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            ++ M   G  P+EF+  ++L         SS  + +   +H      G+ +N  V ++L
Sbjct: 77  FFVSMIRSGFCPNEFSLATMLTACHSMVAHSSNKLLIALSLHGVAVRAGLDSNPFVGSSL 136

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK+ RI  A + F ++  +++  WN ++ G++LNGF    ++    +  S L PD 
Sbjct: 137 LLMYAKHGRIAAAQRAFAHIRNKDLTCWNAMLEGYVLNGFGHHAIRTVLLMHHSGLAPDR 196

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
           YT   A+ +C+  +    G+Q+H  V+ + L S  S+ N+++ +Y +    + +  VF  
Sbjct: 197 YTYISAVKACSISAQWDLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 256

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           + +KDT+SWN +IS +A   + K    C   M  +G  KP++ TF+ +L           
Sbjct: 257 IRQKDTVSWNTMISGFAHDEDDKAVFGCLIDMSRIG-CKPNEVTFSVLLRLSGAKENESL 315

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           G +I  ++   +G+       + ++++L R G L+ A
Sbjct: 316 GLQIV-ALAYRHGYTDNVLVANAVINMLSRCGLLNRA 351


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 181/516 (35%), Positives = 279/516 (54%), Gaps = 40/516 (7%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           + +S+N M+ G A       AL  +  M+   L P+  TF  +  +C   +    G Q+H
Sbjct: 42  NQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIH 101

Query: 312 AQAMKSGF----EAYTSV---------------------------SNAAITMYSSCGKID 340
           AQ +K G       +TS+                             A IT Y+S G +D
Sbjct: 102 AQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMD 161

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS-- 398
           +A  +F  +  KD+VSWN MIS YA+    + A+  + EM  + ++PDE T  ++L++  
Sbjct: 162 KAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCT 221

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG +E+   IH+++  +G  +N+++ NALI  Y+K   +++A+ +F  +  +++I+WNT
Sbjct: 222 HSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNT 281

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           LI G+       + L  F E+L     P++ T+   L +CA + ++  G+ IH Y+ K  
Sbjct: 282 LIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 341

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             +I+  SL  ++I +YAKCG+++ + +VF+ ++ K   S NA+I  +A HG    A   
Sbjct: 342 KGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDL 401

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
              M+  G I+PD  TF  +LSACSHAGL D G +IF SM  DY   P  +H  CM+DLL
Sbjct: 402 LSRMKKDG-IEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLL 460

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GR+G   EAE +INS  ++     W +L  AC  H NL LG +IA  L++ E   P  YV
Sbjct: 461 GRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYV 520

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSNIYA +  W++ A +R LL   G+ K PGCS I
Sbjct: 521 LLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSI 556



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/433 (30%), Positives = 226/433 (52%), Gaps = 16/433 (3%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL+L+V +  S  L P+ Y+      +CA  + A  G Q+HA  L+ GL    HV  +++
Sbjct: 62  ALNLYVYM-ISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLI 120

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     +    +VF    + DV S+T  ++     G++D A ++FD++P +D+  +NA
Sbjct: 121 SMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNA 180

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF EM K+DV+ D  + A+VLS C  +G +E GRQ+HS +   G
Sbjct: 181 MISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG 240

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VNALI +Y  CG +  A  +FE  +    D IS+N ++ G A +   +EAL+ 
Sbjct: 241 FGSNLKLVNALIDLYSKCGEMERAHGLFEGLQ--YKDVISWNTLIGGYAYINHHKEALLV 298

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMY 333
           F++ML     P+++T +S++ AC       +G  +H    K   G    TS+  + I MY
Sbjct: 299 FQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMY 358

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG I+ A  +F  +  K + S N MI  +A      +A      M+  GI PD+ TF 
Sbjct: 359 AKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFV 418

Query: 394 SLLAS---SGFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHNMS- 448
            LL++   +G  ++   I   + ++  I   ++    +I    ++   K+A ++ ++M+ 
Sbjct: 419 GLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTM 478

Query: 449 -PRNIITWNTLIN 460
            P  +I W +L+ 
Sbjct: 479 EPDGVI-WGSLLK 490



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 256/544 (47%), Gaps = 52/544 (9%)

Query: 124 YSWTTFLSAC--TKMGH-VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           Y+ +  L  C  T   H + YA  VF  + + +   +N MI G   +      + L+  M
Sbjct: 10  YALSKLLDFCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYM 69

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L +  ++Y+F  +   C  +   + G+Q+H+ + K G +  + V  +LI+MY   G V
Sbjct: 70  ISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIV 129

Query: 240 VDACKVFEEAK------------GY-----------------VCDHISYNVMMDGLASVG 270
            DA KVF+ +             GY                 + D +S+N M+ G A +G
Sbjct: 130 EDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIG 189

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
           R +EAL  F +M+   ++P E T  +V+S C       +G Q+H+     GF +   + N
Sbjct: 190 RYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVN 249

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I +YS CG+++ A  +F  LQ KD++SWNT+I  YA  N  + A+L + EM  +G  P
Sbjct: 250 ALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETP 309

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQ 442
           ++ T  S+L   A  G I++   IH ++   + GIITN  +  +LI  YAK   I+ A Q
Sbjct: 310 NDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQ 369

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +  +++ + N +I GF ++G         S +    + PD+ T    LS+C+    
Sbjct: 370 VFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGL 429

Query: 503 LRHGKQI-HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALI 560
              G++I     L   +  K+     MI L  + G    +  + N M +E D + W +L+
Sbjct: 430 SDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489

Query: 561 SAYAQHG--EGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVN 617
            A   H   E  E ++     Q + +I+P       +LS   + +   DD  R+  +++N
Sbjct: 490 KACKIHKNLELGELIA-----QKLMKIEPKNPGSYVLLSNIYATSARWDDVARV-RTLLN 543

Query: 618 DYGF 621
           D G 
Sbjct: 544 DKGL 547



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 33/236 (13%)

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F ++   N ++WNT+I G  L+  P+  L  +  ++   L P+ YT      SCA+
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLG-------------------------------NAM 528
             + + GKQIH  +LK  L   + +                                 AM
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           IT YA  G++D + ++F+ +  KD +SWNA+IS YA+ G  KEA+  F  M  +  +KPD
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMD-VKPD 209

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           ++T   VLS C+H+G V+ G +I  S ++++GF      ++ ++DL  + G ++ A
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIH-SWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264


>gi|302798965|ref|XP_002981242.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
 gi|300151296|gb|EFJ17943.1| hypothetical protein SELMODRAFT_113974 [Selaginella moellendorffii]
          Length = 734

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 205/687 (29%), Positives = 350/687 (50%), Gaps = 53/687 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +RSG  ++AL LF ++     + P+ +  ++ LAACA L +   G ++H   L
Sbjct: 84  NLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGREIHKRVL 139

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +     P +A+ ++                  +QN    S  T  + C   G V    +
Sbjct: 140 ES-----PSIASDVV------------------VQN----SLVTMYARC---GSVLEGIK 169

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +FD MP ++L  +NAMI+   +  Y +  + L+  M +  +  + + FAS+L+ C + G 
Sbjct: 170 IFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGN 229

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G  +H  +T  G    + + NALI MY  CG + +A +VF        D  ++  M+
Sbjct: 230 LELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATR--DVFTWTSMI 287

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G A +G   EA   +  M    + P+  TFV+++SAC     G  +H +    GFE+ T
Sbjct: 288 AGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGFESIT 347

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  A + MYS CG +++A  +FA++Q+KD VSW+ M++++AQ      A+  + +M   
Sbjct: 348 VVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILE 407

Query: 384 GIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G++    TF S L +        + + I   +  +GI     +   L+SAY+K   +++A
Sbjct: 408 GMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEA 467

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +IF  M  R+++TW  +I G+   G     L+ F  +    + PD  T S  L +C   
Sbjct: 468 RKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQAC--- 524

Query: 501 SSLRHGKQIHGYVLKNNLISKMS--LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           S+L  G+++H  +L      KMS  LGN +I +YA+CG +  + ++F  M     ISW+A
Sbjct: 525 SNLEDGREVHARILAAQ-GGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSA 583

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +++  A+HG+  + +  ++ M + G + PD  T  A+L++CSHAGL D+    F  +++D
Sbjct: 584 IMTLCARHGQHDDIIDTYRLMVNEG-VVPDGVTLIAILNSCSHAGLTDEACHYFTWIISD 642

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLG 676
           +     ++H  CM+DLL RAG LDEAE +I+   +  R D      + +AC    +L  G
Sbjct: 643 FELPHLDEHYQCMVDLLCRAGRLDEAEELIS---MIDRPDVVTLNTMLAACKNQQDLHRG 699

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAA 703
              A   ++  +   + +VLLS IYA 
Sbjct: 700 ARTAA-QMQSTESCAAPFVLLSQIYAG 725



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 299/615 (48%), Gaps = 48/615 (7%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C + RN + G +LH    R+G     ++   ++ +Y                     
Sbjct: 21  LQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMY--------------------- 59

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                      K G +  A   FD++ D++  V+N MI+G   +G     + LF   HK+
Sbjct: 60  ----------AKCGCLADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELF---HKM 106

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVV 240
           D+  + + FAS L+ C AGL  LE GR++H  V +S   +  V V N+L+TMY  CG+V+
Sbjct: 107 DIPPNGFIFASALAAC-AGLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVL 165

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +  K+F+       + +S+N M+         E+AL  +  M    L P+   F S+++A
Sbjct: 166 EGIKIFDAMPRK--NLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTA 223

Query: 301 CLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C       +G  +H +    G +    + NA I MYS CG +DEA  +F+ L  +D+ +W
Sbjct: 224 CASLGNLELGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTW 283

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            +MI+ YAQ   G  A   Y  M+   + P   TF +LL++   +E  + +H  V   G 
Sbjct: 284 TSMIAGYAQLGFGSEAFAFYDGMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGF 343

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +   V  AL+  Y++   ++ A  +F  M  ++ ++W+ ++      G P + L  F +
Sbjct: 344 ESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQ 403

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +++  ++    T   AL +C+     R  K I   +  + +    S+   +++ Y+KCGD
Sbjct: 404 MILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGD 463

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ + ++F+ M  +D ++W  +I  YAQ G+ K A+  F  M+  G ++PD  TF++VL 
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQ 522

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACS+   ++DG  +   ++   G   ++   + ++++  R G + +A ++  S    +R 
Sbjct: 523 ACSN---LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRI 579

Query: 658 DNWWALFSACAAHGN 672
            +W A+ + CA HG 
Sbjct: 580 -SWSAIMTLCARHGQ 593



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 207/396 (52%), Gaps = 17/396 (4%)

Query: 285 ASLRPSELT-FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           A+L+ SE++ +  ++  C   R    G ++H    +SG+   + +    + MY+ CG + 
Sbjct: 7   AALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLA 66

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS- 399
           +A   F  + +K+   WN MIS YA+    R A+  + +M    I P+ F F S LA+  
Sbjct: 67  DAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASALAACA 123

Query: 400 --GFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
             G +E    IH  V  +  I +++ V N+L++ YA+   + +  +IF  M  +N+++WN
Sbjct: 124 GLGDLEQGREIHKRVLESPSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWN 183

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I+ F+   +P Q L+ +  +    L P+ +  +  L++CA + +L  G  IH  +   
Sbjct: 184 AMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLELGSSIHQRITSL 243

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L   + + NA+I +Y+KCG +D +L VF+ +  +D  +W ++I+ YAQ G G EA + +
Sbjct: 244 GLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFY 303

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M+    + P  ATF A+LSACS    ++ G  + +  V  +GF       + ++ +  
Sbjct: 304 DGMRR-DCVSPTSATFVALLSACS---TLEQGKHLHEE-VKAFGFESITVVETALMFMYS 358

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           R G L++AE  + ++  Q    +W A+ ++ A  G+
Sbjct: 359 RCGSLEDAE-FLFAKMQQKDYVSWSAMVTSHAQFGD 393


>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 186/595 (31%), Positives = 319/595 (53%), Gaps = 31/595 (5%)

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSL 213
           PV + + T   +N Y         E  K  + + + SF  +LS+C   G L  G  LH+ 
Sbjct: 20  PVSSPLKTLILQNPYS--------ETSKFAINQVDISF--LLSLCGREGYLHLGSSLHAS 69

Query: 214 VTKS-GF---------SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           + K+ GF           ++ V N+L++MY  CG + DA KVF+     + D IS+N  +
Sbjct: 70  IIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMP--MKDTISWNSRI 127

Query: 264 DGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSACLCPRVGY---QVHAQAMKSGF 319
            GL   G +E     F+ +  + + +  + T  +V++AC  P   Y    +H+     G+
Sbjct: 128 SGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGY 187

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E   +V NA IT Y  CG       +F  + EK++V+W  +IS  +Q      ++  + +
Sbjct: 188 EREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGK 247

Query: 380 MQSVGIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+   + P+  T+  SL+A SG   + E   IH  V+  G+  ++ + +AL+  Y+K   
Sbjct: 248 MRDGPVDPNSLTYLSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGS 307

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A++IF +    + ++   ++ G   NGF  + +Q F +++ + +  D   +S  L  
Sbjct: 308 LEDAWKIFESAEEVDEVSMTVILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGV 367

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
               +SL  GKQIH  ++K +  S   + N +I +Y+KCGDLD S+++F  M +++++SW
Sbjct: 368 FGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSW 427

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N++I+A+A+HG G  A+  ++ M+  G + P   TF ++L AC+H GLV+ G    +SM 
Sbjct: 428 NSMIAAFARHGNGSRALQLYEEMRLEG-VWPTDVTFLSLLHACAHVGLVEKGMGFLESMA 486

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
            DYG  P  +H +C++D++GRAG L+EA++ I     +     W AL  AC+ HGN  +G
Sbjct: 487 KDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMG 546

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +  A  L  +  + P+ Y+LL+NIY++ G W+E A   + +K  GV K+ G SWI
Sbjct: 547 KYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWI 601



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 223/454 (49%), Gaps = 16/454 (3%)

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W + LS  ++ G +  A +VFD MP +D   +N+ I+G   NG  ++G  +F+++++  +
Sbjct: 92  WNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGI 151

Query: 186 RR-DNYSFASVLSVCDAGLLEF---GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
            + D  +  +VL+ CD    EF    + +HSLV   G+   ++V NALIT YF CG    
Sbjct: 152 YQFDQATLTTVLTACDKP--EFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSS 209

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             +VF+E      + +++  ++ GL+     EE+L  F  M    + P+ LT++S + AC
Sbjct: 210 GRRVFDEMSEK--NVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTYLSSLMAC 267

Query: 302 ---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                 R G Q+H    K G      + +A + MYS CG +++A  IF   +E D VS  
Sbjct: 268 SGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEEVDEVSMT 327

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFIN 415
            ++   AQ      +I  +++M   G+  D     ++L   G    + + + IH+ +   
Sbjct: 328 VILVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKK 387

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
              +N  V+N LI+ Y+K   +  + +IF  M  RN ++WN++I  F  +G   + LQ +
Sbjct: 388 SFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLY 447

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAK 534
            E+ +  + P + T    L +CA +  +  G      + K+  I  +M     ++ +  +
Sbjct: 448 EEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGR 507

Query: 535 CGDLDCSLRVFNMMIEKDTI-SWNALISAYAQHG 567
            G L+ + +    + EK  I  W AL+ A + HG
Sbjct: 508 AGLLNEAKKFIERLPEKPGILVWQALLGACSIHG 541



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 138/578 (23%), Positives = 252/578 (43%), Gaps = 80/578 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L  +G  +    +F Q++ S   + D  +L+T L AC           +H+   
Sbjct: 124 NSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVF 183

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    V N +++ Y       S +RVF E+   +V +WT  +S  ++    + + +
Sbjct: 184 LYGYEREITVGNALITSYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLK 243

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
           +F KM  RD P                             V  ++ ++ S L  C +GL 
Sbjct: 244 LFGKM--RDGP-----------------------------VDPNSLTYLSSLMAC-SGLQ 271

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            +  GRQ+H LV K G    + + +AL+ MY  CG++ DA K+FE A+    D +S  V+
Sbjct: 272 AIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEE--VDEVSMTVI 329

Query: 263 MDGLASVGRVEEALIRFRDMLVAS--LRPSELT-FVSVMSACLCPRVGYQVHAQAMKSGF 319
           + GLA  G  EE++  F  M+     + P+ ++  + V        +G Q+H+  +K  F
Sbjct: 330 LVGLAQNGFEEESIQVFVKMVKNGVVIDPNMISAILGVFGIDTSLALGKQIHSLIIKKSF 389

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   V+N  I MYS CG +D++  IF  + +++ VSWN+MI+ +A+   G  A+  Y E
Sbjct: 390 GSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWNSMIAAFARHGNGSRALQLYEE 449

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G+ P + TF SLL +   + +VE     + +     GI   ++    ++    +  
Sbjct: 450 MRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKDYGIGPRMEHYACVVDMMGRAG 509

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL--- 490
            + +A +    +  +  I+ W  L+    ++G    G    ++L L +   P  Y L   
Sbjct: 510 LLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKYAANQLFLQAPESPAPYILLAN 569

Query: 491 -------------------SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
                               + ++    IS +   KQIH +V+++ +     +      +
Sbjct: 570 IYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIHSFVVEDRMHPHAEI------I 623

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYA-QHGE 568
           Y   G+L      F +M+++  +     I  Y  QHG+
Sbjct: 624 YGVLGEL------FKLMMDEGYVPDKRFILYYLDQHGK 655


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 188/589 (31%), Positives = 293/589 (49%), Gaps = 91/589 (15%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA- 285
            +L+  Y   G +  A   F+       D + +N ++   A       A+  FR +L + 
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 286 SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---- 336
           SLRP + +F +++SA      +  R   Q+    +KSG     SVSNA + +Y  C    
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 337 ------------------------------GKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
                                         G +  A  +F  +  K  V WN MIS Y  
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ- 422
             +   A   +  M    +  DEFTF S+L   A++GF    + +H      G IT +Q 
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVH------GQITRLQP 325

Query: 423 ---------VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT---------------- 457
                    V+NAL++ Y+K   I  A +IF NM  +++++WNT                
Sbjct: 326 NFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVE 385

Query: 458 ---------------LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
                          +++G++  GF    L+ F+ +   +++P +YT + A+S+C  + S
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGS 445

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L+HGKQ+HG++++       S GNA+IT+YA+CG +  +  +F +M   D++SWNA+ISA
Sbjct: 446 LKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISA 505

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
             QHG G+EA+  F  M   G I PD+ +F  VL+AC+H+GLVD+G + F+SM  D+G I
Sbjct: 506 LGQHGHGREALELFDRMVAEG-IYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGII 564

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P EDH + ++DLLGRAG + EA  +I +   +     W A+ S C   G++ LG   A  
Sbjct: 565 PGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQ 624

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L +        Y+LLSN Y+AAG W +AA +R+L++  GV K+PGCSWI
Sbjct: 625 LFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 673



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 230/490 (46%), Gaps = 49/490 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN--QLHAY 82
           N  ++  +R+ H   A+ +F  + +S  L+PD YS +  L+A  +L N +  +  QL   
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCS 184

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVK---RVFSEIQNPDVYSWTTFLSACTKMGHV 139
            L++G      V+N +++LY     L + +   +V  E+ + D  +WTT +    + G V
Sbjct: 185 VLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDV 244

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
             A  VF+++  +   V+NAMI+G   +G       LFR M    V  D ++F SVLS C
Sbjct: 245 GAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSAC 304

Query: 200 -DAGLLEFGRQLHSLVTK--SGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAK---- 250
            +AG    G+ +H  +T+    F     + V NAL+T+Y  CGN+  A ++F+  K    
Sbjct: 305 ANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDV 364

Query: 251 --------GYV---C--------------DHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                   GYV   C              + +S+ VM+ G    G  E+AL  F  M   
Sbjct: 365 VSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAE 424

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            ++P + T+   +SAC      + G Q+H   ++ GFE   S  NA ITMY+ CG + EA
Sbjct: 425 DVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEA 484

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---S 399
            ++F  +   D VSWN MIS   Q   GR A+  +  M + GI PD  +F ++L +   S
Sbjct: 485 NLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS 544

Query: 400 GFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWN 456
           G + E  +   +     GII        LI    +  RI +A  +   M   P   I W 
Sbjct: 545 GLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI-WE 603

Query: 457 TLINGFLLNG 466
            +++G   +G
Sbjct: 604 AILSGCRTSG 613



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 43/269 (15%)

Query: 424 SNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
           + +L++AYA   R+  A   F  +  + R+ +  N +I+ +         +  F  LL S
Sbjct: 91  ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150

Query: 482 -ELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
             LRPD+Y+ +  LS+   +   S+RH  Q+   VLK+     +S+ NA++ LY KC  L
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210

Query: 539 DCS---LRVFNMMIEKDTIS-------------------------------WNALISAYA 564
           + +    +V + M +KD ++                               WNA+IS Y 
Sbjct: 211 EATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYV 270

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN-DYGFIP 623
             G   EA   F+ M  + R+  D+ TFT+VLSAC++AG    G  +   +      F+P
Sbjct: 271 HSGMVVEAFELFRRMV-LERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVP 329

Query: 624 --AEDHLSCMLDLLGRAGYLDEAERVINS 650
             A    + ++ L  + G +  A R+ ++
Sbjct: 330 EAALPVNNALVTLYSKCGNIAVARRIFDN 358



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 11/106 (10%)

Query: 507 KQIHGYVLKNNLISKMSL---------GNAMITLYAKCGDLDCSLRVFNMMIE--KDTIS 555
           + IH Y L  +L +  +L           +++  YA  G L  ++  F+ + +  +DT+ 
Sbjct: 64  RLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVL 123

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            NA+ISAYA+      AV+ F+++   G ++PD  +FTA+LSA  H
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGH 169


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 176/523 (33%), Positives = 283/523 (54%), Gaps = 13/523 (2%)

Query: 217 SGFSCLVSVVNALITMYFNCGN--VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
           +GF      +N LI    + G+  V  A  VF   +  V D +++N M+    +      
Sbjct: 4   TGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTR--VLDVLTWNSMLRAFVNSNMPRR 61

Query: 275 ALIRFRDMLVASLR-PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           AL  + +ML  S   P   TF S++  C   L  +VG  +H Q +K    +   +    +
Sbjct: 62  ALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLL 121

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            MY++CG +  A  +F R+  ++ V W +MIS Y + +    A+L Y +M+  G  PDE 
Sbjct: 122 NMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEV 181

Query: 391 TFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           T  +L+++   ++ + +   +H+ +    +     + +AL++ YAK   +K A Q+F  +
Sbjct: 182 TMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQL 241

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPDEYTLSVALSSCARISSLRHG 506
           S +++  W+ LI G++ N    + LQ F E+   S +RP+E T+   +S+CA++  L  G
Sbjct: 242 SDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETG 301

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + +H Y+ +      +SL N++I +++KCGD+D + R+F+ M  KD ISWN++++  A H
Sbjct: 302 RWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALH 361

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G+EA++ F  MQ    ++PD+ TF  VL+ACSHAGLV +G ++F  +   YG     +
Sbjct: 362 GLGREALAQFHLMQTTD-LQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE 420

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H  CM+DLL RAG L EA   I    +Q     W ++  AC  + NL LG   A  LLE 
Sbjct: 421 HYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLEL 480

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           E     VY+LLSNIYA   +W E   +REL+   G+ K PGCS
Sbjct: 481 EPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQKTPGCS 523



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 185/391 (47%), Gaps = 38/391 (9%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           +L  N  L     S   + AL  + ++    +  PD ++  + L  CA L     G  LH
Sbjct: 43  VLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLH 102

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++  L +  ++  T+L++Y    DL S + +F                   +MGH  
Sbjct: 103 GQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE------------------RMGH-- 142

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                      R+  V+ +MI+G  +N   +  + L+++M +     D  + A+++S C 
Sbjct: 143 -----------RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACA 191

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           +   L  G +LHS + +        + +AL+ MY  CG++  A +VF++      D  ++
Sbjct: 192 ELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDK--DVYAW 249

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PRVGYQVHAQAM 315
           + ++ G     R  EAL  FR++   S +RP+E+T ++V+SAC        G  VH    
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++      S++N+ I M+S CG ID A  IF  +  KD++SWN+M++  A   LGR A+ 
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALA 369

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            +  MQ+  ++PDE TF  +L +     +V+
Sbjct: 370 QFHLMQTTDLQPDEITFIGVLTACSHAGLVQ 400



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 80/178 (44%), Gaps = 6/178 (3%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL LF ++     ++P+  ++   ++ACA L +   G  +H Y  R        + N++
Sbjct: 264 EALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSL 323

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP--- 155
           + ++    D+ + KR+F  +   D+ SW + ++     G    A   F  M   DL    
Sbjct: 324 IDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDE 383

Query: 156 -VYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSFASVLS-VCDAGLLEFGRQL 210
             +  ++T C+  G    G  LF E+  L  VR  +  +  ++  +C AGLL   R+ 
Sbjct: 384 ITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREF 441


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 159/432 (36%), Positives = 254/432 (58%), Gaps = 6/432 (1%)

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R G +VHA  +K+ +     +S   I +Y+ C  +  A  +F  ++E+++VSW  MIS Y
Sbjct: 27  REGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGY 86

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS----SGFIEMVEMIHAFVFINGIITN 420
           +QR     A+  +++M      P+EFTF ++L+S    SGF E+   IH+ +F      +
Sbjct: 87  SQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGF-ELGRQIHSHIFKRNYENH 145

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           I V ++L+  YAK  RI +A  +F  +  R++++   +I+G+   G   + L+ F  L  
Sbjct: 146 IFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQR 205

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
             +  +  T +  L++ + +++L HGKQ+H +VL+  L   + L N++I +Y+KCG+L+ 
Sbjct: 206 EGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNY 265

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           + ++FN M  +  ISWNA++  Y++HG+G E V  FK M++  ++KPD  TF AVLS CS
Sbjct: 266 ARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCS 325

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           H GL D G  +FD M+N    I A  +H  C++DLLGRAG ++EA  +I     +  +  
Sbjct: 326 HGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAI 385

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W +L  AC  H N  +G  +   LLE E +    YV+LSN+YA+AG WE+  N+REL+  
Sbjct: 386 WGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMME 445

Query: 720 TGVIKQPGCSWI 731
             VIK+PG SWI
Sbjct: 446 KAVIKEPGRSWI 457



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 215/460 (46%), Gaps = 27/460 (5%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
           N +L+   N R +   +RV + +      P VY  T  +   TK   +  A  VFD+M +
Sbjct: 14  NMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRE 73

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           R++  + AMI+G ++ G+    + LF +M + D   + ++FA+VLS C      E GRQ+
Sbjct: 74  RNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQI 133

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           HS + K  +   + V ++L+ MY   G + +A  VFE       D +S   ++ G A +G
Sbjct: 134 HSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPER--DVVSCTAIISGYAQLG 191

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSN 327
             EEAL  F  +    +  + +T+ S+++A         G QVH+  ++     Y  + N
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIR 386
           + I MYS CG ++ A  IF  +  + ++SWN M+  Y++   G   + L  L  +   ++
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVK 311

Query: 387 PDEFTFGSLLA--SSGFIEMVEMIHAFVFING---IITNIQVSNALISAYAKNERIKQAY 441
           PD  TF ++L+  S G +E   +      +NG   I   I+    +I    +  R+++A+
Sbjct: 312 PDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAF 371

Query: 442 QIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS---- 495
           ++   M   P   I W +L+    ++     G   F    + E+ P+     V LS    
Sbjct: 372 ELIKKMPFEPTAAI-WGSLLGACRVHSNTNIG--EFVGCRLLEIEPENAGNYVILSNLYA 428

Query: 496 SCARISSLRHGKQI--HGYVLKNNLISKMSLGNAMITLYA 533
           S  R   +R+ +++     V+K    S + L   + T YA
Sbjct: 429 SAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYA 468



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 189/433 (43%), Gaps = 51/433 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S+ G   +ALHLFVQ+  S   +P+ ++ +T L++C        G Q+H++  +  
Sbjct: 83  ISGYSQRGFASEALHLFVQMLRS-DTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRN 141

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            + +  V +++L +Y  A  +   + VF  +   DV S T                    
Sbjct: 142 YENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCT-------------------- 181

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                      A+I+G  + G ++  + LF  + +  +  +  ++AS+L+       L+ 
Sbjct: 182 -----------AIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDH 230

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+HS V +      V + N+LI MY  CGN+  A K+F      V   IS+N M+ G 
Sbjct: 231 GKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMP--VRTVISWNAMLVGY 288

Query: 267 ASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAY 322
           +  G+  E +  F+ M   + ++P  +TF++V+S C        G ++  + M  G E  
Sbjct: 289 SKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIE 348

Query: 323 TSVSN--AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILA 376
             + +    I +    G+++EA  +  ++  E     W +++     ++  N+G      
Sbjct: 349 AGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCR 408

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN-----IQVSNALISAY 431
            LE++      +     +L AS+G  E V  +   +    +I       I++   + + Y
Sbjct: 409 LLEIEPENA-GNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFY 467

Query: 432 AKNERIKQAYQIF 444
           A +    +  ++F
Sbjct: 468 ASDRSHPRREEVF 480



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%), Gaps = 12/172 (6%)

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
           E++ D Y +   L+ C    ++R G+++H +++K   +  + L   +I LY KC  L C+
Sbjct: 7   EIKFDGYNM--LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCA 64

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
             VF+ M E++ +SW A+IS Y+Q G   EA+  F  M      +P++ TF  VLS+C+ 
Sbjct: 65  RHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLR-SDTEPNEFTFATVLSSCTG 123

Query: 602 AGLVDDGTRIFDSMVN-DYGFIPAEDHL---SCMLDLLGRAGYLDEAERVIN 649
               + G +I   +   +Y     E+H+   S +LD+  +AG + EA  V  
Sbjct: 124 FSGFELGRQIHSHIFKRNY-----ENHIFVGSSLLDMYAKAGRIHEARGVFE 170


>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
          Length = 620

 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 201/646 (31%), Positives = 326/646 (50%), Gaps = 89/646 (13%)

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +++ PH+ + +  +   +    S        Q+P+       +      G V  A ++FD
Sbjct: 10  VRSSPHLRHAVAYVSYGSAAATSAAVGLERAQDPN-----RLIVDLAAAGRVWDARKLFD 64

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEF 206
             P+RD+  + A+++     G       LF    + D RR+  ++ ++LS    AGL++ 
Sbjct: 65  GTPERDVVSWTALVSAYARRGMLRDARSLF---DRSDARRNVVTWTALLSGYARAGLVDE 121

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
              L   + +      V   N ++  Y   G   DAC +F+     V D  S+N+++  L
Sbjct: 122 AEVLFQRMPQRN----VVSWNTMLEAYAVAGRAGDACALFDRMP--VRDAGSWNILLAML 175

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
              G V++A   F  M      P       VM                      A+T++ 
Sbjct: 176 VRSGSVDKARELFGRM------PER----DVM----------------------AWTTMV 203

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +      +  G +DEA ++F  + E+++VSWN MIS Y + +    A+            
Sbjct: 204 DGV----ARSGNVDEARLLFDSMPERNVVSWNAMISGYTRNHRLDEAL------------ 247

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            D FT              +M H          +I   N +I+ + +N+ +K+A ++F  
Sbjct: 248 -DLFT--------------KMPH---------RDIASCNIMITGFIQNKDLKRARKLFDE 283

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M  RN++TW T++NG+L        L  F  +LMS +RP++ T   AL +C+ +++L  G
Sbjct: 284 MPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEG 343

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           KQ+H  + K        +G+A++ +YAKCG++  + ++F++  EKD ISWN +I+AYA H
Sbjct: 344 KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHH 403

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           G G EA+  ++ MQ  G  +P+  T+  +LSACSH+GLVD+G +IF+SMVND      ++
Sbjct: 404 GVGIEAIHLYEKMQGNG-YRPNDVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDE 462

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHGNLRLGRIIAGLLLE 685
           H +C++DL  RAG LD+A+R+I+   I+  S + W AL   C AHGN  +G + A  L++
Sbjct: 463 HYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQ 522

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            E D    Y LLSNIYA+AG W+EAA IR  +   G+ KQPGCSWI
Sbjct: 523 AEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 568



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 87/189 (46%), Gaps = 15/189 (7%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+  +    L AC++L     G Q+H    +   +    V + ++++Y    ++   +
Sbjct: 320 IRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLAR 379

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENG 168
           ++F   +  D+ SW   ++A    G    A  +++KM           Y  +++ C+ +G
Sbjct: 380 KLFDLSREKDLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPNDVTYVVLLSACSHSG 439

Query: 169 YEDIGIGLFREM---HKLDVRRDNYSFASVLSVCD-AGLLEFGRQL-HSLVTK----SGF 219
             D G+ +F  M     + VR ++Y+   ++ +C  AG L+  ++L H L  K    S +
Sbjct: 440 LVDEGLKIFESMVNDRSIAVRDEHYT--CLIDLCSRAGRLDDAKRLIHYLKIKPASGSVW 497

Query: 220 SCLVSVVNA 228
           S L+   NA
Sbjct: 498 SALLGGCNA 506


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 181/542 (33%), Positives = 286/542 (52%), Gaps = 42/542 (7%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           LI    N G++  A  +F++      D  ++ +++ G    G  ++A+  +  +L  ++R
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEP--DLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P +   +SV  AC       V  ++H  A++ GF     + NA I M+  C  ++ A  +
Sbjct: 75  PDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCV 134

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEM 404
           F  +  KD+VSW +M   Y    + R  IL + EM   GIR +  T  S+L A + +I++
Sbjct: 135 FDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL 194

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              +H F+  N +  N+ VS+AL++ YA +  +KQA  +F +M  R+I++WN ++  + L
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFL 254

Query: 465 NGFPVQGLQHFSELLM-----------------------------------SELRPDEYT 489
           N    +GL  F ++                                     S ++P+  T
Sbjct: 255 NKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRIT 314

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           +  AL  C  + SLR GK+IHGYV ++  I  +++  A++ LYAKCGDL+ S  VFN M 
Sbjct: 315 IVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP 374

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            KD ++WN +I A + HG+G E++  F  M D G ++P+  TF  VLS CSH+ L D+G 
Sbjct: 375 RKDVVAWNTMIMANSMHGKGGESLILFNKMLDSG-VEPNSVTFIGVLSGCSHSQLADEGL 433

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAA 669
            +F+SM +++   P  DH SCM+D+L RAG L+EA   I    I+  +  W AL  AC  
Sbjct: 434 LVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRV 493

Query: 670 HGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           + N+ LG + A  L E E D    YVLLSNI   A  W EA+ IR++++  G+ K PG S
Sbjct: 494 YKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRS 553

Query: 730 WI 731
           W+
Sbjct: 554 WV 555



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 200/410 (48%), Gaps = 42/410 (10%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            +  C   G +  A  +FDK+P+ DL  +  +I+G T++G+    I ++  +   +VR D
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 189 NYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
            +   SV   C A G L   +++H    + GF+  + + NALI M+  C  V  A  VF+
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFD 136

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRV 306
           +    V D +S+  M     + G   + ++ FR+M +  +R + LT  S++ AC    ++
Sbjct: 137 DM--VVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL 194

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY-- 364
           G +VH   +++  E    VS+A + MY+S   + +A ++F  +  +DIVSWN M++ Y  
Sbjct: 195 GREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFL 254

Query: 365 ---AQRNLG-----------------RSAILAYLE-------------MQSVGIRPDEFT 391
               +R LG                  +AI   ++             MQ  GI+P+  T
Sbjct: 255 NKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRIT 314

Query: 392 FGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             S L     +E +   + IH +VF +  I ++ ++ AL+  YAK   ++ +  +F+ M 
Sbjct: 315 IVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMP 374

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            ++++ WNT+I    ++G   + L  F+++L S + P+  T    LS C+
Sbjct: 375 RKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCS 424



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/459 (20%), Positives = 189/459 (41%), Gaps = 78/459 (16%)

Query: 34  SGHYQDAL-HLFVQIHS---SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SGH Q       + I+S   S  ++PD + L +   ACA   +     ++H  A++ G  
Sbjct: 50  SGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFN 109

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               + N ++ ++   + +   + VF ++   DV SWT+                     
Sbjct: 110 KDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTS--------------------- 148

Query: 150 PDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR 208
                      +T C  N G    GI LFREM    +R ++ + +S+L  C A  ++ GR
Sbjct: 149 -----------MTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPAC-ADYIKLGR 196

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--------------------- 247
           ++H  + ++     V V +AL+ MY +   +  A  VF+                     
Sbjct: 197 EVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNK 256

Query: 248 ------------EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
                         +G   +  S+N  + G    G+ E AL     M  + ++P+ +T V
Sbjct: 257 EYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIV 316

Query: 296 SVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           S +  C      R G ++H    +  F    +++ A + +Y+ CG ++ +  +F  +  K
Sbjct: 317 SALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRK 376

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MI 408
           D+V+WNTMI   +    G  +++ + +M   G+ P+  TF  +L+     ++ +    + 
Sbjct: 377 DVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVF 436

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
           ++    + I  +    + ++   ++  R+++AY     M
Sbjct: 437 NSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKM 475



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 11/189 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +++   ++G ++ AL +  ++  S  +KP+  ++ + L  C NL +   G ++H Y  
Sbjct: 281 NAAISGCMQNGQHELALGILCKMQDS-GIKPNRITIVSALPGCTNLESLRGGKEIHGYVF 339

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R        +   ++ LY    DL   + VF+ +   DV +W T + A +  G    +  
Sbjct: 340 RHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLI 399

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS-FASVL 196
           +F+KM D  +      +  +++GC+ +   D G+ +F  M   H +    D+YS    VL
Sbjct: 400 LFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVL 459

Query: 197 SVCDAGLLE 205
           S   AG LE
Sbjct: 460 S--RAGRLE 466


>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 184/589 (31%), Positives = 312/589 (52%), Gaps = 13/589 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           MP+RD  V+NA+I G + NGYE     LF  M +        +  ++L  C   G +  G
Sbjct: 1   MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +H +  KSG      V NALI+ Y  C  +  A  +F E K      +S+N M+   +
Sbjct: 61  RSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDK--STVSWNTMIGAYS 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ-VHAQAMKSGFEAYTSVS 326
             G +EEA+  F++M   S+  S +T ++++SA     V ++ +H   +KSG     SV 
Sbjct: 119 QSGLMEEAITVFKNMFEKSVEISPVTIINLLSA----HVSHEPLHCLVVKSGMVNDISVV 174

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + +  YS CG +D A  ++A   +  IV   +++S+YA++     A++ + +M+ + ++
Sbjct: 175 TSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMK 234

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D      +L    +S  I++   +H +   +G+     V N LI+ Y+K + ++    +
Sbjct: 235 IDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFL 294

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISS 502
           F  +    +I+WN++I+G + +G      + F ++ +S  L PD  T++  L+ C+++  
Sbjct: 295 FQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCC 354

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK++HGY L+NN  ++  +  A+I +YAKCG+   +  VF  +    T +WN++IS 
Sbjct: 355 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 414

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y+  G    A+SC+  M++ G +KPD+ TF  VLSAC+H G VD+G   F +M+ ++G  
Sbjct: 415 YSLSGLQNRALSCYLEMREKG-LKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGIS 473

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P   H + M+ LLGRA    EA  +I    I+  S  W AL SAC  H  L +G  IA  
Sbjct: 474 PCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKK 533

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +   +     +YVL+SN+YA   +W++   +R+++K  G     G S I
Sbjct: 534 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVSQI 582



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 189/451 (41%), Gaps = 75/451 (16%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+G+  DA  LF+ +       P   +L   L  C      + G  +H  A 
Sbjct: 10  NALICGYSRNGYESDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGIAA 68

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL+    V N ++S Y    +L S + +F E+++    SW T + A ++ G ++ A  
Sbjct: 69  KSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAIT 128

Query: 145 VFDKMPDR---------------------------------DLPVYNAMITGCTENGYED 171
           VF  M ++                                 D+ V  +++   +  GY D
Sbjct: 129 VFKNMFEKSVEISPVTIINLLSAHVSHEPLHCLVVKSGMVNDISVVTSLVCAYSRCGYLD 188

Query: 172 -------------------------------IGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                                          I +  F +M +L ++ D  +   +L  C 
Sbjct: 189 SAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVALVGILHGCK 248

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           ++  ++ G  LH    KSG      VVN LITMY    +V     +F++ +      IS+
Sbjct: 249 NSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQLQE--TPLISW 306

Query: 260 NVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           N ++ G    GR   A   F  M L   L P  +T  S+++ C    C  +G ++H   +
Sbjct: 307 NSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL 366

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++ FE    V  A I MY+ CG   +A  +F  ++     +WN+MIS Y+   L   A+ 
Sbjct: 367 RNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQNRALS 426

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
            YLEM+  G++PD+ TF  +L++    GF++
Sbjct: 427 CYLEMREKGLKPDKITFLGVLSACTHGGFVD 457



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 4/166 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   +SG    A  +F Q+  S  L PD  ++++ LA C+ L     G +LH
Sbjct: 303 LISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKELH 362

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y LR   +    V   ++ +Y    + V  + VF  I+ P   +W + +S  +  G  +
Sbjct: 363 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQN 422

Query: 141 YACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
            A   + +M ++ L      +  +++ CT  G+ D G   FR M K
Sbjct: 423 RALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIK 468


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 182/512 (35%), Positives = 274/512 (53%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ +C      + G Q+H Q +
Sbjct: 71  WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130

Query: 316 KSGFE----AYTS-----VSN----------------------AAITMYSSCGKIDEACM 344
           K GF+     +TS     V N                      A IT Y+S G I+ A  
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  +  KD+VSWN  IS YA+    + A+  + +M    +RPDE T  ++L   A SG 
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G   N+++ NALI  Y+K   ++ A  +F  +S +++I+WNTLI G
Sbjct: 251 IELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG 310

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F ++L S  +P++ T+   LS+CA + ++  G+ IH Y+ K    + 
Sbjct: 311 YTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVT 370

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VF+ M+ +   SWNA+I  +A HG    A   F  M
Sbjct: 371 NASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 430

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +  G I+PD  TF  +LSACSH+G++D G  IF SM  DY  +P  +H  CM+DL G +G
Sbjct: 431 RKNG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSG 489

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE++IN+  ++     W +L  AC  HGN+ LG   A  L++ E + P  YVLLSN
Sbjct: 490 LFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSN 549

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA A  W E A  R LL   G+ K PGCS I
Sbjct: 550 IYATAERWNEVAKTRALLNDKGMKKVPGCSSI 581



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 155/546 (28%), Positives = 262/546 (47%), Gaps = 50/546 (9%)

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDV----YSWTTFLSACTKMGHVD---YACEVFDKMPD 151
           LSL    + L S++ + +++    +    Y+ +  L  C    H D   YA  VFD + +
Sbjct: 6   LSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQE 65

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
             L ++N M  G   +      + L+  M  L +  ++Y+F  +L  C  +   + G+QL
Sbjct: 66  PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK------------GY------ 252
           H  V K GF   + +  +LI+MY   G + DA KV +++             GY      
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185

Query: 253 -----------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                      V D +S+N  + G A  G  +EAL  F+ M+  ++RP E T V+V+SAC
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                  +G QVH+     GF     + NA I +YS CG+++ AC +F  L  KD++SWN
Sbjct: 246 AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWN 305

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFV--F 413
           T+I  Y   NL + A+L + +M   G +P++ T  S+L++    G I++   IH ++   
Sbjct: 306 TLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKR 365

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           + G+     +  +LI  YAK   I+ A Q+F +M  R++ +WN +I GF ++G       
Sbjct: 366 LKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFD 425

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLY 532
            FS +  + + PD+ T    LS+C+    L  G+ I   + ++  L+ K+     MI L 
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLX 485

Query: 533 AKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
              G    + ++ N M +E D + W +L+ A   HG  +   S     Q++ +I+P+   
Sbjct: 486 GHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGES---YAQNLIKIEPENPG 542

Query: 592 FTAVLS 597
              +LS
Sbjct: 543 SYVLLS 548



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 232/464 (50%), Gaps = 17/464 (3%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ Y+    L +CA       G QLH   L+ G     ++  +++
Sbjct: 87  ALKLYVCM-VSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLI 145

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L   ++V  +  + DV S+T  ++     G ++ A ++FD++P +D+  +NA
Sbjct: 146 SMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNA 205

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
            I+G  E G     + LF++M K +VR D  +  +VLS C  +G +E GRQ+HS +   G
Sbjct: 206 XISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHG 265

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VNALI +Y  CG +  AC +F+       D IS+N ++ G   +   +EAL+ 
Sbjct: 266 FGXNLKIVNALIDLYSKCGELETACGLFQGLSNK--DVISWNTLIGGYTHMNLYKEALLL 323

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMY 333
           F+DML +  +P+++T +S++SAC       +G  +H    K   G    +S+  + I MY
Sbjct: 324 FQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 383

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG I+ A  +F  +  + + SWN MI  +A      +A   +  M+  GI PD+ TF 
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFV 443

Query: 394 SLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHN--M 447
            LL++     M+++  H F  +     ++  ++    +I     +   K+A ++ +   M
Sbjct: 444 GLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEM 503

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-PDEYTL 490
            P  +I W +L+    ++G    G  +   L+  E   P  Y L
Sbjct: 504 EPDGVI-WCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVL 546



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 198/405 (48%), Gaps = 50/405 (12%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSC------GKIDEACMIFARLQEKDIVSWNTMIST 363
           +HAQ +K+G     + + A   +   C        +  A  +F  +QE  ++ WNTM   
Sbjct: 21  IHAQMIKTGLH---NTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRG 77

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
           +A  +   SA+  Y+ M S+G+ P+ +TF  LL   A S   +  + +H  V   G   +
Sbjct: 78  HALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLD 137

Query: 421 IQVSNALISAYAKNER-------------------------------IKQAYQIFHNMSP 449
           + +  +LIS Y +N R                               I+ A+++F  +  
Sbjct: 138 LYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPV 197

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           +++++WN  I+G+   G   + L+ F +++ + +RPDE T+   LS+CA+  S+  G+Q+
Sbjct: 198 KDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQV 257

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H ++  +     + + NA+I LY+KCG+L+ +  +F  +  KD ISWN LI  Y      
Sbjct: 258 HSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLY 317

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDYGFIPAED 626
           KEA+  F+ M   G  KP+  T  ++LSAC+H G +D G  I    D  +   G   A  
Sbjct: 318 KEALLLFQDMLRSGE-KPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLK--GVTNASS 374

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
             + ++D+  + G ++ A++V +S   ++ S +W A+    A HG
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS-SWNAMIFGFAMHG 418



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 164/348 (47%), Gaps = 40/348 (11%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKN--ERIKQAYQIFHNMSPR 450
           SLL     ++ + +IHA +   G+  TN  +S  L         + +  A  +F  +   
Sbjct: 7   SLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEP 66

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
            ++ WNT+  G  L+  PV  L+ +  ++   L P+ YT    L SCA+  + + G+Q+H
Sbjct: 67  XLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLH 126

Query: 511 GYVLK----------NNLISKMSLGN----------------------AMITLYAKCGDL 538
           G VLK           +LIS M + N                      A+IT YA  G +
Sbjct: 127 GQVLKFGFDLDLYIHTSLIS-MYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + + ++F+ +  KD +SWNA IS YA+ G  KEA+  FK M     ++PD++T   VLSA
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN-VRPDESTMVTVLSA 244

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+ +G ++ G ++  S +ND+GF      ++ ++DL  + G L+ A  +   Q +  +  
Sbjct: 245 CAQSGSIELGRQVH-SWINDHGFGXNLKIVNALIDLYSKCGELETACGLF--QGLSNKDV 301

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
             W        H NL    ++    + R  +KP+   +LS + A A L
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHL 349


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 216/670 (32%), Positives = 337/670 (50%), Gaps = 49/670 (7%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKN-ARDLVSVK-RVFSEIQNP--DVYSWTTFLS 131
           G  LHA+AL++G  ++  VAN++++ Y +  R L++    VF +I     DV SW + L+
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90

Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
             +  GH           P   L  + +M++  T                   V    +S
Sbjct: 91  PLS--GH----------RPLDALSRFRSMLSSST-------------------VLPSPHS 119

Query: 192 FASVLSVCDAGLLEFGRQL-HSLVTK--SGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           FA+  +              H+L  K  S  S  V V  +L+ MY   G V DA +VF+ 
Sbjct: 120 FAAAFTAAARAASAPAGTAAHALACKIPSAVSN-VYVCTSLLNMYCKLGIVSDARRVFDG 178

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCPR-- 305
                 +  S++ M+ G A+    EEA   FR ML       SE    +V+SA   P   
Sbjct: 179 MPQR--NSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGL 236

Query: 306 -VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
            +G Q+H   +K G   + SV N+ +TMY+  G +  A  +F   +E++ ++W+ MI+ Y
Sbjct: 237 LMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGY 296

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIITNI 421
           AQ     SA+  + +M + G  P EFTF G L ASS  G + + +  H  +   G    I
Sbjct: 297 AQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQI 356

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V +AL+  YAK   I  A + F  +   +I+ W  +++G + NG   + L  ++ +   
Sbjct: 357 YVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKE 416

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            + P + T++  L +CA I++L  GKQ+H  ++K  L     +G+A+ T+Y+KCG+L+  
Sbjct: 417 GIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDG 476

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           + VF  + ++D I+WN++IS ++Q+G G  A+  F+ M+  G I PD  TF  +L ACSH
Sbjct: 477 MSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI-PDNITFINILCACSH 535

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
            GLVD G   F  M  DYG  P  DH +CM+D+L RAG L EA+  I S  I   +  W 
Sbjct: 536 MGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWR 595

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            +  AC +  +  +G      L+E      S Y+LLSNIYA+   W +   +R L++  G
Sbjct: 596 IVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRG 655

Query: 722 VIKQPGCSWI 731
           V K PGCSW+
Sbjct: 656 VNKDPGCSWV 665



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 202/419 (48%), Gaps = 25/419 (5%)

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK--IDEACMIFARLQE--KDIVSWN 358
           CPR G  +HA A+KSG  ++  V+N+ I  YSS  +  +  A  +F  +    +D+ SWN
Sbjct: 27  CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWN 86

Query: 359 TMISTYA-QRNL-GRSAILAYLEMQSVGIRPDEF-TFGSLLASSGFIEMVEMIHAFVF-I 414
           ++++  +  R L   S   + L   +V   P  F    +  A +         HA    I
Sbjct: 87  SLLNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKI 146

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
              ++N+ V  +L++ Y K   +  A ++F  M  RN  +W+T++ G+       +    
Sbjct: 147 PSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDL 206

Query: 475 FSELLMSELRPDEYTLSVALSSCARIS---SLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           F   LM E  P E +  VA +  + +S    L  G+Q+HG ++K+ L+  +S+ N+++T+
Sbjct: 207 FR--LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTM 264

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAK G +  +  VF    E+++I+W+A+I+ YAQ+GE   AVS F  M   G   P + T
Sbjct: 265 YAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAG-FTPTEFT 323

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F  VL+A S  G +  G +    MV   GF       S ++D+  + G + +A+   + Q
Sbjct: 324 FVGVLNASSDLGALAVGKQAHGLMVK-LGFEVQIYVKSALVDMYAKCGCIADAKEGFD-Q 381

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK----PSVYVLLSNIYAAAGL 706
             +     W A+ S     G+++ G     L L    DK    PS   + S + A AG+
Sbjct: 382 LYEVDIVLWTAMVS-----GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGI 435



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +++AL L+ ++     + P   ++++ L ACA +     G QLH   ++ GL    
Sbjct: 399 QNGEHEEALTLYARM-DKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGA 457

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-D 151
            V + + ++Y    +L     VF  I + DV +W + +S  ++ G  + A ++F++M  +
Sbjct: 458 PVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 517

Query: 152 RDLP---VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDAGLL 204
             +P    +  ++  C+  G  D G   F  M K   L  R D+Y+    +LS   AG+L
Sbjct: 518 GTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS--RAGML 575

Query: 205 EFGRQLHSLVTKSGFSCLVSVV 226
           +  +     +T    +CL  +V
Sbjct: 576 KEAKDFIESITIDHGTCLWRIV 597


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 191/614 (31%), Positives = 313/614 (50%), Gaps = 24/614 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL----DVRRDNY 190
           + G +  A ++FD+M +RD+  + A+++GC  NG    GI    +M +L      R ++ 
Sbjct: 163 RCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSR 222

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +  S L  C   G L  GR LH    K G      VV+AL +MY  C    DAC +F E 
Sbjct: 223 TMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPEL 282

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RV 306
                D +S+  ++      G   EA+  F++M  + L+P E+    V+S          
Sbjct: 283 TEK--DVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNR 340

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G   HA  ++  F     ++N+ I+MY     +D A  +F  L ++D  SW+ M++ Y +
Sbjct: 341 GKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCK 400

Query: 367 RNLGRSAILAYLEMQSVGIRPDEF-----TFGSLLASS---GFIEMVEMIHAFVFINGII 418
             L    +  Y +MQ      DEF     +  S ++S    G + + + +H +  I  ++
Sbjct: 401 AGLDVKCLELYRQMQCR--DHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYS-IKCLL 457

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSE 477
               ++N+LI  Y +    + A +IF      R+++TWN LI+ +   G     L  + +
Sbjct: 458 DENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQ 517

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L  +++P+  TL   +S+CA +++L HG+ +H YV    L S +S+  A++ +Y KCG 
Sbjct: 518 MLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQ 577

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  +  +F+ M+++D ++WN +IS Y  HGE  +A+  F  M+  G IKP+  TF A+LS
Sbjct: 578 LGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEME-AGSIKPNSLTFLAILS 636

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC HAGLVD+G ++F  M   Y   P   H +CM+DLLG++G L EAE ++ +  I+   
Sbjct: 637 ACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDG 695

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W  L SAC  H N  +G  +A      +      Y+L+SN Y +A  W+E   +R+ +
Sbjct: 696 GVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTM 755

Query: 718 KRTGVIKQPGCSWI 731
           K  GV K  G S +
Sbjct: 756 KNYGVEKGVGWSAV 769



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 173/666 (25%), Positives = 300/666 (45%), Gaps = 65/666 (9%)

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           +LHA A  +GL + P  A  ++S Y ++         FS    PD + W + L +     
Sbjct: 33  RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRS----- 87

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
              +    FD                          +   R M     R   ++     S
Sbjct: 88  --HHCASDFDS------------------------ALSAHRRMRASGARPSRFTAPLAAS 121

Query: 198 VCDAGLL-EFGRQLHSLVTKSGF---SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
                     G  +HS   K G       V+V ++L+ MY  CG++ DA K+F+E     
Sbjct: 122 AAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVER- 180

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASLRPSELTFVSVMSACLC---PRV 306
            D +++  ++ G    G   + +     M+     +  RP+  T  S + AC        
Sbjct: 181 -DVVAWTAVVSGCVRNGECGKGICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSA 239

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G  +H  A+K G      V +A  +MYS C   ++AC++F  L EKD+VSW  +I  Y +
Sbjct: 240 GRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCR 299

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITNIQV 423
           R L R A+  + EM+  G++PDE       S L SS  +   +  HA +       ++ +
Sbjct: 300 RGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLI 359

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM--- 480
           +N+LIS Y K E +  A  +F  +  R+  +W+ ++ G+   G  V+ L+ + ++     
Sbjct: 360 ANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDH 419

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
            E   D  +L  A+SSC+R+  LR G+ +H Y +K  L+ + S+ N++I +Y +CG+ + 
Sbjct: 420 DEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIK-CLLDENSITNSLIGMYGRCGNFEL 478

Query: 541 SLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAM--QDVGRIKPDQATFTAVLS 597
           + ++F +  + +D ++WNALIS+Y+  G   +A+S +  M  +DV   KP+ +T   V+S
Sbjct: 479 ACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDV---KPNSSTLITVIS 535

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           AC++   ++ G  +  S V + G        + ++D+  + G L  A  + +S  +Q   
Sbjct: 536 ACANLAALEHG-ELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSM-LQRDV 593

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANIRE 715
             W  + S    HG       +    +E    KP+    L+ + A   AGL +E    R+
Sbjct: 594 VTWNVMISGYGMHGEANQALKLFS-EMEAGSIKPNSLTFLAILSACCHAGLVDEG---RK 649

Query: 716 LLKRTG 721
           L  R G
Sbjct: 650 LFIRMG 655



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 214/470 (45%), Gaps = 51/470 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G  ++A+ LF ++  S  L+PD   +S  L+   +  N   G   HA  +R       
Sbjct: 299 RRGLAREAVELFQEMEQS-GLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSV 357

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +AN+++S+Y                                K   VD A  VF  +  R
Sbjct: 358 LIANSLISMYG-------------------------------KFELVDVAGTVFGMLHQR 386

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR---DNYSFASVLSVCDA-GLLEFGR 208
           D   ++ M+ G  + G +   + L+R+M   D      D  S  S +S C   G L  G+
Sbjct: 387 DDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQ 446

Query: 209 QLHSLVTKSGFSCLV---SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            +H    K    CL+   S+ N+LI MY  CGN   ACK+F  AK    D +++N ++  
Sbjct: 447 SVHCYSIK----CLLDENSITNSLIGMYGRCGNFELACKIFAVAK-LRRDVVTWNALISS 501

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAY 322
            + VGR  +AL  +  ML   ++P+  T ++V+SAC        G  +H+     G E+ 
Sbjct: 502 YSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESD 561

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            S+S A + MY+ CG++  A  IF  + ++D+V+WN MIS Y        A+  + EM++
Sbjct: 562 VSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEA 621

Query: 383 VGIRPDEFTFGSLLASSGFIEMV-EMIHAFVFING--IITNIQVSNALISAYAKNERIKQ 439
             I+P+  TF ++L++     +V E    F+ + G  +  N++    ++    K+  +++
Sbjct: 622 GSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQE 681

Query: 440 AYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           A  +   M  + +   W TL++   ++     GL+   +   S+ R D Y
Sbjct: 682 AEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGY 731



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 33/187 (17%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++ S  G   DAL L+ Q+ +   +KP+  +L T ++ACANL     G  LH+Y  
Sbjct: 496 NALISSYSHVGRSNDALSLYGQMLT-EDVKPNSSTLITVISACANLAALEHGELLHSYVK 554

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL++   ++  ++ +Y     L + + +F  +   DV +W                  
Sbjct: 555 NMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTW------------------ 596

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
                        N MI+G   +G  +  + LF EM    ++ ++ +F ++LS  C AGL
Sbjct: 597 -------------NVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGL 643

Query: 204 LEFGRQL 210
           ++ GR+L
Sbjct: 644 VDEGRKL 650


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/557 (33%), Positives = 292/557 (52%), Gaps = 18/557 (3%)

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACK 244
           R D ++F S++    +       QLH+   + G     V    +L+  Y   G + +A K
Sbjct: 67  RPDGFTFPSLIRAAPSN--ASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYK 124

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VF+E      D  ++N M+ GL    R  EA+  F  M+   +    +T  SV+  C+  
Sbjct: 125 VFDEMSER--DVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVL- 181

Query: 305 RVGYQV-----HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
            +G QV     H  A+K G +    V NA I +Y   G ++EA  +F  ++ +D+V+WN+
Sbjct: 182 -LGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNS 240

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFING 416
           +IS   QR    +A+  +  M+  G+ PD  T  SL   +A  G     + +H +V   G
Sbjct: 241 IISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRG 300

Query: 417 I-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
             + +I   NA++  YAK   I+ A ++F +M  ++ ++WNTLI G++ NG   + ++ +
Sbjct: 301 WDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERY 360

Query: 476 SELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
             +   E L+  + T    L + + + +L+ G ++H   +K  L   + +G  +I LYAK
Sbjct: 361 GHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAK 420

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           CG L  ++ +F  M  + T  WNA+IS    HG G EA++ F  MQ  G IKPD  TF +
Sbjct: 421 CGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEG-IKPDHVTFVS 479

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           +L+ACSHAGLVD G   FD M   Y  +P   H +CM D+LGRAG LDEA   I +  I+
Sbjct: 480 LLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIK 539

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
             S  W AL  AC  HGN+ +G++ +  L E + +    YVL+SN+YA  G W+    +R
Sbjct: 540 PDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVR 599

Query: 715 ELLKRTGVIKQPGCSWI 731
            L++R  + K PG S I
Sbjct: 600 SLVRRQNLQKTPGWSSI 616



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 162/591 (27%), Positives = 269/591 (45%), Gaps = 62/591 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHS-SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  +A  SR+   + A  L   I S ++  +PD ++  + + A  +  +AA   QLHA A
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAA---QLHACA 93

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           LR GL                                P V++  + + A  + G +  A 
Sbjct: 94  LRLGLV------------------------------RPSVFTSGSLVHAYLRFGRISEAY 123

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD+M +RD+P +NAM++G   N      +GLF  M    V  D  + +SVL +C    
Sbjct: 124 KVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMC---- 179

Query: 204 LEFGRQLHSLV-----TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHI 257
           +  G Q+ +LV      K G    + V NALI +Y   G + +A  VF    G  C D +
Sbjct: 180 VLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFH---GMECRDLV 236

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQA 314
           ++N ++ G    G+   AL  F+ M  + + P  LT VS+ SA       R    +H   
Sbjct: 237 TWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYV 296

Query: 315 MKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           M+ G++    ++ NA + MY+    I+ A  +F  +  +D VSWNT+I+ Y Q  L   A
Sbjct: 297 MRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEA 356

Query: 374 ILAYLEMQS-VGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           +  Y  MQ   G++  + TF S+L +    G ++    +HA     G+  ++ V   LI 
Sbjct: 357 VERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLID 416

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK  ++ +A  +F  M  R+   WN +I+G  ++G   + L  FS +    ++PD  T
Sbjct: 417 LYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVT 476

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFNM 547
               L++C+    +  G+     +     I  ++   A M  +  + G LD +   + NM
Sbjct: 477 FVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNM 536

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFK-AMQDVGRIKPDQATFTAVLS 597
            I+ D+  W AL+ A   HG     V   K A Q++  + P+   +  ++S
Sbjct: 537 PIKPDSAVWGALLGACRIHGN----VEMGKVASQNLFELDPENVGYYVLMS 583



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 201/412 (48%), Gaps = 9/412 (2%)

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF-EAYTSV 325
           A++ R+   L+R         RP   TF S++ A        Q+HA A++ G        
Sbjct: 46  AALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFT 105

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           S + +  Y   G+I EA  +F  + E+D+ +WN M+S   +      A+  +  M   G+
Sbjct: 106 SGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGV 165

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             D  T  S+L      G   +  ++H +   +G+   + V NALI  Y K   +++A  
Sbjct: 166 AGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQC 225

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +FH M  R+++TWN++I+G    G     L+ F  +  S + PD  TL    S+ A+   
Sbjct: 226 VFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGD 285

Query: 503 LRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            R  K +H YV++    +  +  GNA++ +YAK  +++ + R+F+ M  +D++SWN LI+
Sbjct: 286 GRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLIT 345

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
            Y Q+G   EAV  +  MQ    +K  Q TF +VL A SH G +  G R+  ++    G 
Sbjct: 346 GYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMH-ALSIKIGL 404

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHGN 672
                  +C++DL  + G L  AE ++  + +  RS   W A+ S    HG+
Sbjct: 405 NVDVYVGTCLIDLYAKCGKL--AEAMLLFEKMPRRSTGPWNAIISGLGVHGH 454



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 158/393 (40%), Gaps = 73/393 (18%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   + G    AL +F  +  S  + PD+ +L +  +A A   +      LH
Sbjct: 235 LVTWNSIISGCEQRGQTAAALKMFQGMRGS-GVSPDVLTLVSLASAIAQGGDGRSAKSLH 293

Query: 81  AYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            Y +R G      +A N I+ +Y    ++ + +R+F  +   D  SW T           
Sbjct: 294 CYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNT----------- 342

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSV 198
                               +ITG  +NG  +  +  +  M K + ++    +F SVL  
Sbjct: 343 --------------------LITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPA 382

Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
               G L+ G ++H+L  K G +  V V   LI +Y  CG + +A  +FE+         
Sbjct: 383 YSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG-- 440

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
            +N ++ GL   G   EAL  F  M    ++P  +TFVS+++AC                
Sbjct: 441 PWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC---------------- 484

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAIL- 375
                           S  G +D+    F  +Q   DIV      +  A   LGR+  L 
Sbjct: 485 ----------------SHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADM-LGRAGQLD 527

Query: 376 -AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
            A+  +Q++ I+PD   +G+LL +      VEM
Sbjct: 528 EAFNFIQNMPIKPDSAVWGALLGACRIHGNVEM 560


>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 192/567 (33%), Positives = 303/567 (53%), Gaps = 16/567 (2%)

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           LF E+H       ++   SV+    +     FG QLH L  K+G      V N++ITMYF
Sbjct: 38  LFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYF 97

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
              +V  A +VF+       D I++N +++G    G +EEAL    D+ +  L P     
Sbjct: 98  KFSDVGSARQVFDTMPHR--DPITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELL 155

Query: 295 VSVMSAC---LCPRVGYQVHAQAM---KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            SV+S C   +  ++G Q+HA  +   + G   +  +S A +  Y  CG    A  +F  
Sbjct: 156 ASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMF--LSTALVDFYFRCGDSLMALRVFDG 213

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           ++ K++VSW TMIS          A   +  MQ+ G+ P+  T  +LL   A  GF++  
Sbjct: 214 MEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHG 273

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           + IH + F +G  +    S+AL++ Y +  E +  A  IF   S R+++ W+++I  F  
Sbjct: 274 KEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSR 333

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
            G   + L+ F+++   E+ P+  TL   +S+C  +SSL+HG  +HGY+ K      +S+
Sbjct: 334 RGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISV 393

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GNA+I +YAKCG L+ S ++F  M  +D ++W++LISAY  HG G++A+  F  M + G 
Sbjct: 394 GNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERG- 452

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           +KPD  TF AVLSAC+HAGLV +G RIF  +  D       +H +C++DLLGR+G L+ A
Sbjct: 453 VKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYA 512

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
             +  +  ++  +  W +L SAC  HG L +  ++A  L+  E +    Y LL+ IYA  
Sbjct: 513 LEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEH 572

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G W +   +RE +K   + K  G S I
Sbjct: 573 GHWLDTEQVREAMKLQKLKKCYGFSRI 599



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/584 (26%), Positives = 280/584 (47%), Gaps = 64/584 (10%)

Query: 1   MLQRRITATIAGN----SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPD 56
              RR+  T+A      SN  K  L K           G Y   L LF ++H        
Sbjct: 3   FFTRRLLTTVAPTCSSPSNQIKSFLSK-----------GLYHQTLQLFSELHLCGHSSIS 51

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
            + L + + A ++ +   FG QLH  AL+ G  +   V+N+I+++Y    D+ S ++VF 
Sbjct: 52  FF-LPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFD 110

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
            + + D  +W                               N++I G   NGY +  +  
Sbjct: 111 TMPHRDPITW-------------------------------NSLINGYLHNGYLEEALEA 139

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT---KSGFSCLVSVVNALITM 232
             +++ L +       ASV+S+C   +  + GRQ+H+LV    + G S  +S   AL+  
Sbjct: 140 LNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLS--TALVDF 197

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           YF CG+ + A +VF+  +  V + +S+  M+ G  +    +EA   FR M    + P+ +
Sbjct: 198 YFRCGDSLMALRVFDGME--VKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRV 255

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK-IDEACMIFAR 348
           T ++++SAC  P   + G ++H  A + GFE+  S S+A + MY  CG+ +  A +IF  
Sbjct: 256 TSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEG 315

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM- 407
              +D+V W+++I ++++R     A+  + +M++  I P+  T  +++++   +  ++  
Sbjct: 316 SSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHG 375

Query: 408 --IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H ++F  G   +I V NALI+ YAK   +  + ++F  M  R+ +TW++LI+ + L+
Sbjct: 376 CGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLH 435

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSL 524
           G   Q LQ F E+    ++PD  T    LS+C     +  G++I   V  +  I   +  
Sbjct: 436 GCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEH 495

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHG 567
              ++ L  + G L+ +L +   M  K +   W++L+SA   HG
Sbjct: 496 YACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHG 539



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 2/212 (0%)

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I  FL  G   Q LQ FSEL +       + L   + + +       G Q+H   LK   
Sbjct: 23  IKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGS 82

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            S+  + N++IT+Y K  D+  + +VF+ M  +D I+WN+LI+ Y  +G  +EA+     
Sbjct: 83  HSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALND 142

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           +  +G + P      +V+S C        G +I   +V +     +    + ++D   R 
Sbjct: 143 VYLLGLV-PKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRC 201

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           G    A RV +   ++    +W  + S C AH
Sbjct: 202 GDSLMALRVFDGMEVK-NVVSWTTMISGCIAH 232


>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 189/576 (32%), Positives = 308/576 (53%), Gaps = 31/576 (5%)

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVN 227
           Y+     LF  + +     + Y    V+S C      + G QLHS + + GF+  V + +
Sbjct: 49  YQTFDSDLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICS 108

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           A++ MY  C  +  A +VF E      + +++N ++ G  +V            M   ++
Sbjct: 109 AVVDMYAKCSEIQSAHEVFNEMPER--NDVTWNSLIFGYLNV------------MPTCAM 154

Query: 288 RPSELTFVSVMSACL--CPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           R   +T  SV S CL  C ++     G QVH  ++K GF+    V  A I MYS C  +D
Sbjct: 155 RG--VTSFSV-STCLVVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVD 211

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS-S 399
           ++  +F  + +K++V+W  M++ YAQ      A++   EM  +GI+ +  T+ SLL+S S
Sbjct: 212 DSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFS 271

Query: 400 G--FIEMVEMIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWN 456
           G  +++  + +H  +   G+  N+ ++  L++ Y+K    ++   +I   +   + I+WN
Sbjct: 272 GPKYMQYCKQVHCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWN 331

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I G+   G     L+ F E+  + ++ D YT +  L +     ++  G+++H  ++K 
Sbjct: 332 AVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKT 391

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
              S + + N ++++YA+CG +D S RVF +M + D +SWNAL++  A HG G EAV  F
Sbjct: 392 GYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELF 451

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLL 635
           + M+   +IKP+  TF AVLSACSH G VD G   FD M +D    P   +H + ++D+ 
Sbjct: 452 EQMRKT-KIKPNSTTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIF 510

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           GRAGYL EAE +IN   +      + AL SAC  HGN  +    A  LLE   D P+ Y+
Sbjct: 511 GRAGYLSEAEAIINCMPMDPGPSVYKALLSACLVHGNREIAVRSARKLLELWPDDPATYI 570

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSN+ A  G W++AA++R+L+   GV K PG SWI
Sbjct: 571 LLSNMLATEGYWDDAADVRKLMCDRGVRKNPGYSWI 606



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 291/609 (47%), Gaps = 78/609 (12%)

Query: 31  LSRSGHY-----QDALHLFVQIHSS----HKLK----PDIYSLSTTLAACANLRNAAFGN 77
           LSR+ H      QD L+ + Q   S    H L+     + Y ++  ++ CA   +   G 
Sbjct: 30  LSRAYHIASNPEQDYLYQYYQTFDSDLFAHLLRNGSFSNPYFINKVVSFCAKFASYDLGI 89

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
           QLH+  +R G  +  H+ + ++ +Y             SEIQ+                 
Sbjct: 90  QLHSTIIRMGFTSNVHICSAVVDMYAKC----------SEIQS----------------- 122

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVL 196
               A EVF++MP+R+   +N++I             G    M    +R   ++S ++ L
Sbjct: 123 ----AHEVFNEMPERNDVTWNSLI------------FGYLNVMPTCAMRGVTSFSVSTCL 166

Query: 197 SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            VC    +  FG Q+H L  K GF   V V  ALI MY  C  V D+ +VF+    Y+ D
Sbjct: 167 VVCSQLEVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFD----YMVD 222

Query: 256 H--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-VGY--QV 310
              +++  M+   A   + +EA+I  R+M+   ++ + +T+ S++S+   P+ + Y  QV
Sbjct: 223 KNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQV 282

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           H   ++ G E    ++   +T+YS C   +++   I + +Q  D +SWN +I+ Y+   L
Sbjct: 283 HCSIIRCGLECNLYIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGL 342

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNA 426
           G  A+  + EM+   I+ D +TF SLL + G    IE    +HA +   G  +++ V N 
Sbjct: 343 GEDALKCFCEMRHANIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNG 402

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L+S YA+   I  + ++F  M   ++++WN L+ G   +GF  + ++ F ++  ++++P+
Sbjct: 403 LVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPN 462

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLRV 544
             T    LS+C+ + S+  G +   ++  +  +  + + +  +++ ++ + G L  +  +
Sbjct: 463 STTFLAVLSACSHVGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAI 522

Query: 545 FNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ-ATFTAVLSACSHA 602
            N M ++     + AL+SA   HG  + AV   ++ + +  + PD  AT+  + +  +  
Sbjct: 523 INCMPMDPGPSVYKALLSACLVHGNREIAV---RSARKLLELWPDDPATYILLSNMLATE 579

Query: 603 GLVDDGTRI 611
           G  DD   +
Sbjct: 580 GYWDDAADV 588



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 10/191 (5%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +  N  +A  S  G  +DAL  F ++  ++ +K D Y+ ++ L A         G ++HA
Sbjct: 328 ISWNAVIAGYSNLGLGEDALKCFCEMRHAN-IKMDFYTFTSLLGAIGAFLAIEEGREMHA 386

Query: 82  YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
             ++ G  +  +V N ++S+Y     +   KRVF  +++ DV SW   L+ C   G  + 
Sbjct: 387 LIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNALLTGCAHHGFGNE 446

Query: 142 ACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           A E+F++M    +      + A+++ C+  G  D G+  F  M + D+  +        S
Sbjct: 447 AVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDKGLEYFDFM-RSDISLEPLRVEHYAS 505

Query: 198 VCDAGLLEFGR 208
           V D     FGR
Sbjct: 506 VVDI----FGR 512


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  309 bits (791), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 224/786 (28%), Positives = 378/786 (48%), Gaps = 117/786 (14%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
           +++L ++G  ++AL L  ++   + ++ P+I+     L  C   R+   G Q+HA  L+ 
Sbjct: 34  VSSLCKNGEIREALSLVTEMDFRNLRIGPEIFG--EILQGCVYXRDLRTGQQIHARILKN 91

Query: 87  G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           G   A      T L ++    D + V  V FS+++  +V+SW   +    ++G V+ A  
Sbjct: 92  GDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALM 151

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
            F +M                ENG                +  DN+   +V   C A   
Sbjct: 152 GFVEM---------------LENG----------------IFPDNFVVPNVCKACGALQW 180

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             FGR +H  V K+G    V V ++L  MY  CG + DA KVF+E      + +++N +M
Sbjct: 181 SRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPER--NVVAWNALM 238

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
            G    G  EEA+    DM    + P+ +T  + +SA    R    G Q HA A+ +G E
Sbjct: 239 VGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLE 298

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  + +  Y   G ID A MIF R+ EKD+V+WN +IS Y  + L  +AI     M
Sbjct: 299 LDNILGTSILNFYCKVGLIDYAEMIFDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLM 358

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAF-------------------- 411
           +   ++ D  T  +L++++   + +++          H+F                    
Sbjct: 359 RLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSV 418

Query: 412 -----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS----PRNIITWN------ 456
                VF + +  ++ + N L++AYA++    +A ++F+ M     P N+ITWN      
Sbjct: 419 VDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSL 478

Query: 457 -----------------------------TLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                        T++NG + NG   + +    ++  S +RP+ 
Sbjct: 479 LRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNV 538

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++++VALS+C  ++SL  G+ IHGY+++N    S  S+  +++ +YAKCGD++ + RVF 
Sbjct: 539 FSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFG 598

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
             +  +   +NA+ISAYA +G  KEAV+ ++++++   IKPD  T T VLSAC+HAG ++
Sbjct: 599 SKLYSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDIN 658

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
               IF  MV+ +G  P  +H   M+DLL  AG  ++A  +I     +  +    +L ++
Sbjct: 659 QAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYKPDARMIQSLVAS 718

Query: 667 CAAHGNL-RLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           C    +   L   ++  LLE E +    YV +SN YA  G W+E   +RE++K  G+ K+
Sbjct: 719 CKKQQHKSELMDYLSSQLLESEPENSGNYVRVSNAYAVEGSWDEVVKMREMMKVKGLKKK 778

Query: 726 PGCSWI 731
           PGCSWI
Sbjct: 779 PGCSWI 784



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 268/565 (47%), Gaps = 22/565 (3%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
           Y   ++   +NG     + L  EM   ++R     F  +L  C     L  G+Q+H+ + 
Sbjct: 30  YFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARIL 89

Query: 216 KSG--FSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGR 271
           K+G  ++    +   L+  Y  C    DA +V E   +K  V +  S+  ++     +G 
Sbjct: 90  KNGDFYARNEYIETKLVIFYAKC----DALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGL 145

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNA 328
           VE AL+ F +ML   + P      +V  AC      R G  VH    K+G      V+++
Sbjct: 146 VEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASS 205

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
              MY  CG +D+A  +F  + E+++V+WN ++  Y Q  +   AI    +M+  G+ P 
Sbjct: 206 LADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPT 265

Query: 389 EFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  + L++S  +  +E     HA   +NG+  +  +  ++++ Y K   I  A  IF 
Sbjct: 266 RVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFD 325

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  ++++TWN LI+G++  G     +     + +  L+ D  TLS  +S+ AR  +L+ 
Sbjct: 326 RMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKL 385

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           GK++  Y ++++  S + L +  + +YAKCG +  + +VF+  ++KD I WN L++AYA+
Sbjct: 386 GKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAE 445

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
            G   EA+  F  MQ +  + P+  T+  ++ +    G V++   +F  M    G  P  
Sbjct: 446 SGLSGEALRLFYEMQ-LESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGTFPNM 503

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---FSACAAHGNLRLGRIIAGL 682
              + M++ L + G  +EA   +          N +++    SAC    +L  GR I G 
Sbjct: 504 ISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGY 563

Query: 683 LLEREQ--DKPSVYVLLSNIYAAAG 705
           ++  +Q     S+   L ++YA  G
Sbjct: 564 IIRNQQHSSSASIETSLVDMYAKCG 588



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/418 (21%), Positives = 169/418 (40%), Gaps = 65/418 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++     G  ++A+++  Q+     LK D  +LST ++A A  +N   G ++  Y +
Sbjct: 336 NLLISGYVHQGLVENAIYM-CQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCYCI 394

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   ++   +A+T + +Y     +V  K+VF      D+  W T L+A  + G    A  
Sbjct: 395 RHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEALR 454

Query: 145 VFDKMPDRDLPV---------------------------------------YNAMITGCT 165
           +F +M    +P                                        +  M+ G  
Sbjct: 455 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQMQSSGTFPNMISWTTMMNGLV 514

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
           +NG  +  I   R+M +  +R + +S    LS C +   L FGR +H  + ++   S   
Sbjct: 515 QNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSA 574

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A +VF        +   YN M+   A  G V+EA+  +R + 
Sbjct: 575 SIETSLVDMYAKCGDINKAERVF--GSKLYSELPLYNAMISAYALYGNVKEAVALYRSLE 632

Query: 284 V-ASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AI 330
               ++P  +T  +V+SAC         HA  +    E +T + +              +
Sbjct: 633 EDVGIKPDNITITNVLSAC--------NHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMV 684

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + +S G+ ++A  +   +  K        +    ++   +S ++ YL  Q +   P+
Sbjct: 685 DLLASAGETEKALSLIEEMPYKPDARMIQSLVASCKKQQHKSELMDYLSSQLLESEPE 742


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 172/480 (35%), Positives = 270/480 (56%), Gaps = 8/480 (1%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC--LCP-RVGYQVHAQA 314
           YNV+M  L   G  E+AL  F +ML VAS+ P + T    + +C  +C   VG  + A A
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K G  A   V ++ I MY+SC  +  A ++F  ++E  +V WN +I+ Y +       +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAY 431
             +  M  VG+  DE T  S++ + G I   ++ + +  +V   G++ N  +  ALI  Y
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMY 265

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   + +A ++F  M  R+++ W+ +I+G+       + L  FSE+ ++E+ P++ T+ 
Sbjct: 266 AKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMV 325

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             LS+CA + +L  GK +H Y+ +  L   + LG A++  YAKCG +D ++  F  M  K
Sbjct: 326 SVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVK 385

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           ++ +W ALI   A +G G+EA+  F +M+    I+P   TF  VL ACSH+ LV++G R 
Sbjct: 386 NSWTWTALIKGMATNGRGREALELFSSMRKAS-IEPTDVTFIGVLMACSHSCLVEEGRRH 444

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           FDSM  DYG  P  +H  C++DLLGRAG +DEA + I +  I+  +  W AL S+CA H 
Sbjct: 445 FDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHK 504

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ +G      ++         Y+LLSNIYA+ G W+ AA IR+ +K  G+ K PGCS I
Sbjct: 505 NVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLI 564



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 200/445 (44%), Gaps = 42/445 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +  L  +GH +DALHLFV++     + PD ++++  L +C+ +     G  + AYA+
Sbjct: 87  NVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAV 146

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL A   V ++++ +Y + RD+ + + +F  ++   V  W                  
Sbjct: 147 KRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMW------------------ 188

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                        NA+IT   +NG     + +F+ M ++ V  D  +  SV++ C   G 
Sbjct: 189 -------------NAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGD 235

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G+ +   V + G     +++ ALI MY  CG +  A ++F+  +    D ++++ M+
Sbjct: 236 AKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSR--DVVAWSAMI 293

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G     +  EAL  F +M +A + P+++T VSV+SAC        G  VH+   +    
Sbjct: 294 SGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLS 353

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  A +  Y+ CG ID+A   F  +  K+  +W  +I   A    GR A+  +  M
Sbjct: 354 LTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSM 413

Query: 381 QSVGIRPDEFTF-GSLLASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAYAKNER 436
           +   I P + TF G L+A S    + E    F  +    GI    +    ++    +   
Sbjct: 414 RKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGL 473

Query: 437 IKQAYQIFHNMS-PRNIITWNTLIN 460
           I +AYQ    M    N + W  L++
Sbjct: 474 IDEAYQFIRTMPIEPNAVIWRALLS 498


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  309 bits (791), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 296/565 (52%), Gaps = 42/565 (7%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEA---------KGYVC 254
           G+ LH+L  KS  +    + N  + +Y  CG +  A   F   EE          K Y  
Sbjct: 27  GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86

Query: 255 DH-----------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           D                  +SYN ++ G A       A++ F+ M          T   +
Sbjct: 87  DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146

Query: 298 MSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDI 354
           ++AC C RV    Q+H  ++  GF++Y+SV+NA +T YS  G + EA  +F  + E +D 
Sbjct: 147 IAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDE 205

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAF 411
           VSWN+MI  Y Q   G  A+  Y EM   G + D FT  S+L +   ++ +      H  
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAY---QIFHNMSPRNIITWNTLINGFLLNG-F 467
           +   G   N  V + LI  Y+K       Y   ++F  +   +++ WNT+I+G+ +N   
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGN 526
             + ++ F ++     RPD+ +     S+C+ +SS    KQIHG  +K+++ S ++S+ N
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A+I+LY K G+L  +  VF+ M E + +S+N +I  YAQHG G EA+  ++ M D G I 
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-IA 444

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P++ TF AVLSAC+H G VD+G   F++M   +   P  +H SCM+DLLGRAG L+EAER
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I++   +  S  W AL  AC  H N+ L    A  L+  +    + YV+L+N+YA A  
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARK 564

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           WEE A++R+ ++   + K+PGCSWI
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWI 589



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 246/512 (48%), Gaps = 21/512 (4%)

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           R+   G  LHA  +++ + +  +++N  ++LY     L   +  F   + P+V+S+   +
Sbjct: 22  RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
            A  K   +  A ++FD++P  D   YN +I+G  +       + LF+ M KL    D +
Sbjct: 82  KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141

Query: 191 SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---E 247
           + + +++ C    ++  +QLH      GF    SV NA +T Y   G + +A  VF   +
Sbjct: 142 TLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-- 305
           E +    D +S+N M+          +AL  +++M+    +    T  SV++A       
Sbjct: 201 ELR----DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256

Query: 306 -VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID---EACMIFARLQEKDIVSWNTMI 361
             G Q H + +K+GF   + V +  I  YS CG  D   ++  +F  +   D+V WNTMI
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316

Query: 362 STYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGI 417
           S Y+    L   A+ ++ +MQ +G RPD+ +F  + ++   +      + IH     + I
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376

Query: 418 ITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
            +N I V+NALIS Y K+  ++ A  +F  M   N +++N +I G+  +G   + L  + 
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQ 436

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKC 535
            +L S + P++ T    LS+CA    +  G++    + +   I  +    + MI L  + 
Sbjct: 437 RMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRA 496

Query: 536 GDLDCSLRVFNMMIEKD-TISWNALISAYAQH 566
           G L+ + R  + M  K  +++W AL+ A  +H
Sbjct: 497 GKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 43/300 (14%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKN---ARDLV 109
            K D+++L++ L A  +L +   G Q H   ++AG     HV + ++  Y        + 
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN-G 168
             ++VF EI +PD+  W                               N MI+G + N  
Sbjct: 296 DSEKVFQEILSPDLVVW-------------------------------NTMISGYSMNEE 324

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVV 226
             +  +  FR+M ++  R D+ SF  V S C +       +Q+H L  KS   S  +SV 
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NALI++Y+  GN+ DA  VF+       + +S+N M+ G A  G   EAL+ ++ ML + 
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPEL--NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442

Query: 287 LRPSELTFVSVMSACL-CPRVGY-QVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEA 342
           + P+++TFV+V+SAC  C +V   Q +   MK  F+      + +  I +    GK++EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 68/250 (27%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVK 112
           +PD  S     +AC+NL + +   Q+H  A+++ + +    V N ++SLY          
Sbjct: 342 RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY---------- 391

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                                 K G++  A  VFD+MP+ +   +N MI G  ++G+   
Sbjct: 392 ---------------------YKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + L++ M    +  +  +F +VLS C   G ++ G++                      
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE---------------------- 468

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            YFN   + +  K+  EA+ Y C       M+D L   G++EEA  RF D +    +P  
Sbjct: 469 -YFN--TMKETFKIEPEAEHYSC-------MIDLLGRAGKLEEAE-RFIDAM--PYKPGS 515

Query: 292 LTFVSVMSAC 301
           + + +++ AC
Sbjct: 516 VAWAALLGAC 525


>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 197/709 (27%), Positives = 360/709 (50%), Gaps = 50/709 (7%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G    A  +F  +  S + +P+  + +  L AC N    + G Q+H   +R GL+   
Sbjct: 126 KYGSVSKAFEMFNHMRVSDE-RPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREK 184

Query: 93  HVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
              ++++ +Y K   DL    RVF  +   DV +W                         
Sbjct: 185 FAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAW------------------------- 219

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSVCDAGLLEFGRQL 210
                 N MI+G  +NG   +   LF EM  +  ++ D  +FAS+L  C   +L    Q+
Sbjct: 220 ------NVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCC--SVLNEVMQI 271

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H +V K G    V V +A++ +Y  C +V    K+F+  +    D+  ++ M+ G     
Sbjct: 272 HGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKK--DNFVWSSMISGYTMNN 329

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSN 327
           R EEA+  F+DM    ++  +    S + AC+       G QVH   +K+G +    V++
Sbjct: 330 RGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVAS 389

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ--RNLGRSAILAYLEMQSVGI 385
             + +Y+S G++ +   +F+R+ +KDIV+WN+MI   A+  +  GR   L     ++  +
Sbjct: 390 VLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFL 449

Query: 386 RPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           +    T  ++L S      +     IH+ +  + +  +  V NAL+  Y++ ++I  A++
Sbjct: 450 QIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFK 509

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F ++  ++  +W+++I     N    + L+   E+L   +    Y+L + +S+C+++ +
Sbjct: 510 AFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLT 569

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +  GKQ+H + +K+     + +G+++I +YAKCG+++ S +VF+  ++ + +++NA+IS 
Sbjct: 570 ISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISG 629

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA HG+ ++A+     ++  G + P+  TF A++SACSHAG V++ + +F  M++ Y   
Sbjct: 630 YAHHGKAQQAIEVLSKLEKNG-VAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIK 688

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H SC++D  GRAG L+EA +++           W  L SAC  H N ++G   A  
Sbjct: 689 PKSEHYSCLVDAYGRAGRLEEAYQIVQK---DGSESAWRTLLSACRNHSNRKIGEKSAMK 745

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           ++E      + Y+LLSNIY   G WEEA N R+ + +  V K PG SW+
Sbjct: 746 MIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWL 794



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 173/684 (25%), Positives = 301/684 (44%), Gaps = 85/684 (12%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
           NQ+HA  +     +  H+ANT+LS Y                               +K 
Sbjct: 68  NQIHAQLIITQYISQTHLANTLLSFY-------------------------------SKS 96

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            +  YA ++FDKMP+R++  +  +I+   + G       +F  M   D R +  +FA +L
Sbjct: 97  SNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLL 156

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG-NVVDACKVFEEAKGYVC 254
             C +  L   G Q+H L+ + G        ++L+ MY   G ++ DA +VF        
Sbjct: 157 RACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLER-- 214

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQ 313
           D +++NVM+ G A  G        F +M     L+P  +TF S++  C       Q+H  
Sbjct: 215 DVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQIHGI 274

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
             K G E    V +A + +Y+ C  +     IF  +++KD   W++MIS Y   N G  A
Sbjct: 275 VYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEA 334

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISA 430
           +  + +M    ++ D+    S L +   IE +     +H  +  NG   +  V++ L++ 
Sbjct: 335 VNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNL 394

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG----LQHFSELLMSE-LRP 485
           YA    +    ++F  +  ++I+ WN++I   L    P QG    +Q F EL  +  L+ 
Sbjct: 395 YASFGELGDVEKLFSRIDDKDIVAWNSMI---LAQARPGQGCGRCMQLFQELRRTTFLQI 451

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
              TL   L SC + S L  G+QIH  ++K++L     +GNA++ +Y++C  +D + + F
Sbjct: 452 QGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAF 511

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             ++ KD  SW+++I    Q+    +A+   K M D G I     +    +SACS    +
Sbjct: 512 VDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEG-INFTSYSLPLCISACSQLLTI 570

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ-------------- 651
            +G ++    +   G+       S ++D+  + G ++E+E+V + Q              
Sbjct: 571 SEGKQLHVFAIKS-GYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISG 629

Query: 652 ---HIQARSD-----------------NWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
              H +A+                    + AL SAC+  G +     +  L+L++ + KP
Sbjct: 630 YAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKP 689

Query: 692 SV--YVLLSNIYAAAGLWEEAANI 713
               Y  L + Y  AG  EEA  I
Sbjct: 690 KSEHYSCLVDAYGRAGRLEEAYQI 713



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 132/558 (23%), Positives = 254/558 (45%), Gaps = 52/558 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +++G ++    LF ++     LKPD  + ++ L  C+ L       Q+H    
Sbjct: 220 NVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVM---QIHGIVY 276

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +    V + ++ LY   RD+                      S+C K         
Sbjct: 277 KFGAEVDVVVESAMVDLYAKCRDV----------------------SSCRK--------- 305

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD M  +D  V+++MI+G T N   +  +  F++M +  V+ D +  +S L  C +   
Sbjct: 306 IFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIED 365

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G Q+H L+ K+G      V + L+ +Y + G + D  K+F        D +++N M+
Sbjct: 366 LNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDK--DIVAWNSMI 423

Query: 264 DGLASVGR-VEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
              A  G+     +  F+++   + L+    T V+V+ +C        G Q+H+  +KS 
Sbjct: 424 LAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSS 483

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
              +T V NA + MYS C +ID+A   F  +  KD  SW+++I T  Q  +   A+    
Sbjct: 484 LCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCK 543

Query: 379 EMQSVGIRPDEFTFG-SLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNE 435
           EM   GI    ++    + A S  + + E   +H F   +G   ++ + +++I  YAK  
Sbjct: 544 EMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCG 603

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+++ ++F      N +T+N +I+G+  +G   Q ++  S+L  + + P+  T    +S
Sbjct: 604 NIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMS 663

Query: 496 SCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD-- 552
           +C+    +     +   +L K  +  K    + ++  Y + G L+ + ++    ++KD  
Sbjct: 664 ACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQI----VQKDGS 719

Query: 553 TISWNALISAYAQHGEGK 570
             +W  L+SA   H   K
Sbjct: 720 ESAWRTLLSACRNHSNRK 737


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 185/513 (36%), Positives = 270/513 (52%), Gaps = 41/513 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M+ GLAS   +   L  +  M+     P+  TF  ++ +C   +    G Q+HAQ M
Sbjct: 51  WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110

Query: 316 KSGFE----AYTSV---------------------------SNAAITMYSSCGKIDEACM 344
           K G E    A+TS+                             A IT Y+S G +  A  
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  + E+D+VSWN MI+ Y +      A+  + EM    +RPDE T  S+L   A SG 
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230

Query: 402 IEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           IE+   IH  V  + G  +++++ NA I  Y+K   ++ A  +F  +S +++++WNTLI 
Sbjct: 231 IELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIG 290

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNL 518
           G+       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K    +
Sbjct: 291 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 350

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            +  +L  ++I +YAKCGD++ + +VFN M+ K   SWNA+I  +A HG    A   F  
Sbjct: 351 TNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSR 410

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M+  G I+PD  T   +LSACSH+GL+D G  IF S+  DY   P  +H  CM+DLLG A
Sbjct: 411 MRKNG-IEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHA 469

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G   EAE +I+   ++     W +L  AC  HGNL L    A  L+E E +    YVLLS
Sbjct: 470 GLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLS 529

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           NIYA AG WE+ A IRE+L   G+ K PGCS I
Sbjct: 530 NIYATAGRWEDVARIREVLNGKGMKKVPGCSSI 562



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 255/512 (49%), Gaps = 33/512 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           LL  N  L  L+ S      L ++V++ S   + P+ Y+    L +CA  +    G Q+H
Sbjct: 48  LLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHV-PNAYTFPFLLKSCAKSKTFEEGRQIH 106

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  ++ G +   +   +++S+Y     L   ++VF      DV S T  ++     G V 
Sbjct: 107 AQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVR 166

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
            A +VFD + +RD+  +NAMITG  EN GYE+  + LF+EM + +VR D  +  SVLS C
Sbjct: 167 SARKVFDXITERDVVSWNAMITGYVENCGYEE-ALELFKEMMRTNVRPDEGTLVSVLSAC 225

Query: 200 -DAGLLEFGRQLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DH 256
             +G +E GR++H+LV    GF   + +VNA I +Y  CG+V  A  +FE   G  C D 
Sbjct: 226 AQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFE---GLSCKDV 282

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQ 313
           +S+N ++ G   +   +EAL+ F++ML +   P+++T +SV+ AC       +G  +H  
Sbjct: 283 VSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY 342

Query: 314 AMK--SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             K   G    +++  + I MY+ CG I+ A  +F  +  K + SWN MI  +A      
Sbjct: 343 IDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRAN 402

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN-GIITNIQVSNAL 427
           +A   +  M+  GI PD+ T   LL++   SG +++   I   V  +  I   ++    +
Sbjct: 403 AAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCM 462

Query: 428 ISAYAKNERIKQAYQIFH--NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           I         K+A +I H   M P  +I W +L+    ++G  ++  + F++ LM E+ P
Sbjct: 463 IDLLGHAGLFKEAEEIIHMMPMEPDGVI-WCSLLKACKMHG-NLELAESFAQKLM-EIEP 519

Query: 486 DEYTLSVALSS----------CARISSLRHGK 507
           +     V LS+           ARI  + +GK
Sbjct: 520 ENSGSYVLLSNIYATAGRWEDVARIREVLNGK 551



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/533 (29%), Positives = 250/533 (46%), Gaps = 48/533 (9%)

Query: 124 YSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           Y+ +  L  C    H D   YA  VF+   + +L ++N M+ G   +      + ++  M
Sbjct: 15  YALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRM 74

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
                  + Y+F  +L  C  +   E GRQ+H+ V K G         +LI+MY   G +
Sbjct: 75  VSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRL 134

Query: 240 VDACKVFEEAK------------GYVC-----------------DHISYNVMMDGLASVG 270
            DA KVF+ +             GY                   D +S+N M+ G     
Sbjct: 135 EDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENC 194

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMK-SGFEAYTSVS 326
             EEAL  F++M+  ++RP E T VSV+SAC       +G ++H       GF +   + 
Sbjct: 195 GYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIV 254

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           NA I +YS CG ++ A  +F  L  KD+VSWNT+I  Y   NL + A+L + EM   G  
Sbjct: 255 NAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES 314

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAY 441
           P++ T  S+L   A  G I++   IH ++   + G+     +  +LI  YAK   I+ A+
Sbjct: 315 PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAH 374

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           Q+F++M  +++ +WN +I GF ++G        FS +  + + PD+ TL   LS+C+   
Sbjct: 375 QVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSG 434

Query: 502 SLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNAL 559
            L  G+ I   V ++ N+  K+     MI L    G    +  + +MM +E D + W +L
Sbjct: 435 LLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSL 494

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
           + A   HG  + A S     Q +  I+P+ +    +LS   + AG  +D  RI
Sbjct: 495 LKACKMHGNLELAES---FAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARI 544



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 188/403 (46%), Gaps = 45/403 (11%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE---ACMIFARLQEKDIVSWNTMISTYAQ 366
            HAQ +K+G        +  + +       D    A  +F   QE +++ WNTM+   A 
Sbjct: 1   THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS 60

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
            +   S +  Y+ M S G  P+ +TF  LL   A S   E    IHA V   G   +   
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 424 SNALISAYAKNER-------------------------------IKQAYQIFHNMSPRNI 452
             +LIS YA+N R                               ++ A ++F  ++ R++
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDV 180

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++WN +I G++ N    + L+ F E++ + +RPDE TL   LS+CA+  S+  G++IH  
Sbjct: 181 VSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240

Query: 513 VLKNN-LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           V  ++   S + + NA I LY+KCGD++ +  +F  +  KD +SWN LI  Y      KE
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDYGFIPAEDHL 628
           A+  F+ M   G   P+  T  +VL AC+H G +D G  I    D  +   G        
Sbjct: 301 ALLLFQEMLRSGE-SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLK--GVTNGSALR 357

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           + ++D+  + G ++ A +V NS   ++ S +W A+    A HG
Sbjct: 358 TSLIDMYAKCGDIEAAHQVFNSMMHKSLS-SWNAMIFGFAMHG 399



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 34/298 (11%)

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F      N++ WNT++ G   +   V  L+ +  ++     P+ YT    L SCA+
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 500 ISSLRHGKQIHGYVLK----------NNLISKMSLG---------------------NAM 528
             +   G+QIH  V+K           +LIS  +                        A+
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           IT YA  GD+  + +VF+ + E+D +SWNA+I+ Y ++   +EA+  FK M     ++PD
Sbjct: 156 ITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN-VRPD 214

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           + T  +VLSAC+ +G ++ G  I   + + +GF  +   ++  + L  + G ++ A  + 
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLF 274

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
             + +  +    W        H NL    ++    + R  + P+   +LS + A A L
Sbjct: 275 --EGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 330


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  308 bits (790), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 185/674 (27%), Positives = 341/674 (50%), Gaps = 41/674 (6%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P+ ++ S+ L +C  L + ++G ++HA +++ G ++   + ++++ LY            
Sbjct: 118 PNAFTFSSILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLY------------ 165

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                              ++    + AC++F  M   D   +  +I  C + G     +
Sbjct: 166 -------------------SRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGKCSHAL 206

Query: 175 GLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            ++ EM +  V  + ++F  +L+      L++G+ +H+     G    + +  AL+ MY 
Sbjct: 207 RIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVKLNLVLKTALVNMYS 266

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            C  + DA KV +    Y  D I +  ++ GLA   + +EA+  F  M ++ +  S  T+
Sbjct: 267 RCQRIEDAIKVSKLTPEY--DVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSASNFTY 324

Query: 295 VSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-IFARLQ 350
           +S++S C   L   +G Q+H++ +++G E    V NA + MY  C  I E  + +F  ++
Sbjct: 325 LSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMFRGIK 384

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEM 407
             +++SW ++I+ +A+    + ++  ++EM++VG++P+ FT   +L     I+       
Sbjct: 385 SPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIKSPYQTLK 444

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +       ++ V NAL+ AYA + R+  A+++  +M+ R+ IT+ +L       G+
Sbjct: 445 LHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLATRLNQMGY 504

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
               L   S +  ++++ D ++L+   S+ A +  +  GKQ+H Y LK+ L   +S+ N 
Sbjct: 505 HELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSCCLSVANG 564

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I LY K G +  + R F  + E D +SWN LIS  A +G    A+S F  M+  G I+P
Sbjct: 565 LIDLYGKYGLVHEARRAFTEITEPDVVSWNGLISGLASNGHISSALSAFDDMRLRG-IQP 623

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  TF  VLS CSH GLVD G + F SM   +   P  DH  C++D+LGRAG L+EA  +
Sbjct: 624 DSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQSDHYVCLVDILGRAGRLEEAMNI 683

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +  ++  +  +  L +AC+ H N+ LG  +A   LE     P+ ++LL  +Y   G +
Sbjct: 684 IETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGLELNPLDPAFHLLLVKLYDDCGRY 743

Query: 708 EEAANIRELLKRTG 721
           +     R  +K+ G
Sbjct: 744 DLGEKTRRSIKQKG 757



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 163/629 (25%), Positives = 294/629 (46%), Gaps = 61/629 (9%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V++A + FD+MP RD+  +  +++   +N   +  + +F  M       + ++F+S+L  
Sbjct: 70  VEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRS 129

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C A G   +G+++H+   K GF     + ++LI +Y    +  DACK+F        D +
Sbjct: 130 CFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDS--GDTV 187

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--LCPRVGYQVHAQAM 315
           S+  ++      G+   AL  + +ML A +  +E TFV +++A   +  + G  +HA A+
Sbjct: 188 SWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAI 247

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
             G +    +  A + MYS C +I++A  +     E D++ W  +IS  AQ    + A+ 
Sbjct: 248 VLGVKLNLVLKTALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVA 307

Query: 376 AYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           A+ +M+  G+    FT+ S+L+   S   +++   IH+ V   G+  ++ V NAL+  Y 
Sbjct: 308 AFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYM 367

Query: 433 KNERI-KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           K   I +   ++F  +   N+I+W +LI GF  +GF    L  F E+    ++P+ +TLS
Sbjct: 368 KCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLS 427

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
           + L  C+ I S     ++HG+++K      + +GNA++  YA  G +D + RV   M ++
Sbjct: 428 IVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQR 487

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           D+I++ +L +   Q G  + A+S    M +   +K D  + T   SA +  G ++ G ++
Sbjct: 488 DSITYTSLATRLNQMGYHELALSVISHMFN-ADVKIDGFSLTCFFSASASLGRIETGKQL 546

Query: 612 FDSMVNDYGFIPAEDHLSC-------MLDLLGRAGYLDEAERVINS-------------- 650
                + Y     +  LSC       ++DL G+ G + EA R                  
Sbjct: 547 -----HCYSL---KSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNGLIS 598

Query: 651 --------------------QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
                               + IQ  S  +  + S C+  G + +G      + E    +
Sbjct: 599 GLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVE 658

Query: 691 PSV--YVLLSNIYAAAGLWEEAANIRELL 717
           P    YV L +I   AG  EEA NI E +
Sbjct: 659 PQSDHYVCLVDILGRAGRLEEAMNIIETM 687



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 245/467 (52%), Gaps = 18/467 (3%)

Query: 193 ASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           + V+S+C+   L+ G  +HS + K G    + + N L+++Y  C +V  A + F+E    
Sbjct: 24  SKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMP-- 81

Query: 253 VC-DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGY 308
            C D +S+  ++       R EEAL  F  M+++   P+  TF S++ +C        G 
Sbjct: 82  -CRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGK 140

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           ++HA ++K GFE+   + ++ I +YS     ++AC +F+ +   D VSW T+I++  Q  
Sbjct: 141 RIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAG 200

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV--EMIHAFVFINGIITNIQVSNA 426
               A+  Y+EM    +  +EFTF  LLA+S FI +   ++IHA   + G+  N+ +  A
Sbjct: 201 KCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLIHAHAIVLGVKLNLVLKTA 260

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           L++ Y++ +RI+ A ++       ++I W  +I+G   N    + +  F ++ +S +   
Sbjct: 261 LVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSAS 320

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVF 545
            +T    LS C  I SL  G+QIH  V++  L   + +GNA++ +Y KC  + +  LR+F
Sbjct: 321 NFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLRMF 380

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             +   + ISW +LI+ +A+HG  +++++ F  M+ VG ++P+  T + VL  CS     
Sbjct: 381 RGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVG-VQPNSFTLSIVLRVCSAIKSP 439

Query: 606 DDGTRIFDSMVN---DYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
               ++   ++    DY  +      + ++D    +G +D+A RV+ 
Sbjct: 440 YQTLKLHGHIIKTKADYDVVVG----NALVDAYAGSGRVDDAWRVVK 482



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 43/365 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +  G  QD+L+LF+++ +   ++P+ ++LS  L  C+ +++     +LH + ++  
Sbjct: 395 IAGFAEHGFQQDSLNLFMEMRTV-GVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTK 453

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V N ++  Y  +                               G VD A  V  
Sbjct: 454 ADYDVVVGNALVDAYAGS-------------------------------GRVDDAWRVVK 482

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  RD   Y ++ T   + GY ++ + +   M   DV+ D +S     S   + G +E 
Sbjct: 483 DMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIET 542

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+QLH    KSG SC +SV N LI +Y   G V +A + F E      D +S+N ++ GL
Sbjct: 543 GKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEP--DVVSWNGLISGL 600

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQ-VHAQAMKSGFEAY 322
           AS G +  AL  F DM +  ++P  +TF+ V+S C       +G Q  H+       E  
Sbjct: 601 ASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSMREMHDVEPQ 660

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI---STYAQRNLGRSAILAYL 378
           +      + +    G+++EA  I   +  E D   + T++   S +   NLG       L
Sbjct: 661 SDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNLGEDVARRGL 720

Query: 379 EMQSV 383
           E+  +
Sbjct: 721 ELNPL 725



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 3/177 (1%)

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           S   + SL+ G  IH  ++K  L   + L N +++LY+KC  ++ + + F+ M  +D +S
Sbjct: 28  SLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCRDVVS 87

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  ++SA+ ++   +EA+  F  M   G   P+  TF+++L +C   G    G RI  S 
Sbjct: 88  WTGILSAHIKNERHEEALDIFDFMVLSGPY-PNAFTFSSILRSCFALGDFSYGKRIHASS 146

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +  +GF   +   S ++DL  R    ++A ++  S      + +W  + ++C   G 
Sbjct: 147 IK-HGFESNQILGSSLIDLYSRFDSTEDACKLF-SYMDSGDTVSWTTVIASCVQAGK 201


>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
 gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
 gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
 gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
 gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
          Length = 685

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 184/549 (33%), Positives = 273/549 (49%), Gaps = 47/549 (8%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NAL++     G   DA  +F        D  SYN ++  LA  GR  +AL     M    
Sbjct: 85  NALLSACARLGRADDALALFGAIPD--PDQCSYNAVVAALAQHGRGGDALRFLAAMHADD 142

Query: 287 LRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
              +  +F S +SAC      R G QVHA   KS   +   +  A + MY+ C + +EA 
Sbjct: 143 FVLNAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQ 202

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA------ 397
            +F  + E++IVSWN++I+ Y Q      A+  ++ M   G  PDE T  S+++      
Sbjct: 203 KVFDAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLA 262

Query: 398 --------------SSGFIEMVEMIHAFV---------------FINGIITNIQVSNALI 428
                         S  F E + + +A V               F    I ++    ++I
Sbjct: 263 AGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMI 322

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK+  +  A  +F  M  +N++ WN LI  +  N    + L+ F  L    + P  Y
Sbjct: 323 TGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHY 382

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSL 542
           T    L++CA +++L+ G+Q H +VLK          S + +GN+++ +Y K G +    
Sbjct: 383 TYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGA 442

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
           +VF  M  +D +SWNA+I  YAQ+G  K+A+  F+ M      +PD  T   VLSAC H+
Sbjct: 443 KVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERML-CSNERPDSVTMIGVLSACGHS 501

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLV +G R F SM  D+G IP  DH +CM+DLLGRAG+L E E +I +  ++  +  W +
Sbjct: 502 GLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWAS 561

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           L  AC  H N+ +G   AG L E + D    YVLLSN+YA  G W +   +R  +K  GV
Sbjct: 562 LLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGV 621

Query: 723 IKQPGCSWI 731
            KQPGCSWI
Sbjct: 622 SKQPGCSWI 630



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 245/518 (47%), Gaps = 49/518 (9%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT+LS Y     L   +RVF  + + + +S+   LSAC ++G  D A  +F  +PD D  
Sbjct: 54  NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPDPDQC 113

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
            YNA++    ++G     +     MH  D   + YSFAS LS C +      G Q+H+LV
Sbjct: 114 SYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGEQVHALV 173

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
           TKS     V +  AL+ MY  C    +A KVF+       + +S+N ++      G V+E
Sbjct: 174 TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPER--NIVSWNSLITCYEQNGPVDE 231

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG-FEAYTSVSNAAI 330
           AL  F  M+     P E+T  SVMSAC      R G QVH + +KS  F     ++NA +
Sbjct: 232 ALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALV 291

Query: 331 TMYSSCGKIDEACMIFARLQ-------------------------------EKDIVSWNT 359
            MY+ CG+  EA  +F R+                                EK++V+WN 
Sbjct: 292 DMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNV 351

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIH------A 410
           +I+TYA  +    A+  ++ ++   + P  +T+G++L   A+   +++ +  H       
Sbjct: 352 LIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEG 411

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
           F F +G  +++ V N+L+  Y K   I    ++F  M+ R+ ++WN +I G+  NG    
Sbjct: 412 FRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKD 471

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN-LISKMSLGNAMI 529
            L  F  +L S  RPD  T+   LS+C     ++ G++    + +++ +I        MI
Sbjct: 472 ALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMI 531

Query: 530 TLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
            L  + G L +    + NM +E D + W +L+ A   H
Sbjct: 532 DLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLH 569



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 129/518 (24%), Positives = 215/518 (41%), Gaps = 81/518 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A L++ G   DAL     +H+      + YS ++ L+ACA+ + +  G Q+HA   
Sbjct: 116 NAVVAALAQHGRGGDALRFLAAMHAD-DFVLNAYSFASALSACASEKASRTGEQVHALVT 174

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++   +  ++   ++ +Y         ++VF  +   ++ SW + ++   + G VD A  
Sbjct: 175 KSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNGPVDEA-- 232

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
                                        + LF  M K     D  + ASV+S C AGL 
Sbjct: 233 -----------------------------LALFVRMMKDGFVPDEVTLASVMSAC-AGLA 262

Query: 205 --EFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEA------------ 249
               GRQ+H+ + KS  F   + + NAL+ MY  CG   +A  VF+              
Sbjct: 263 AGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMI 322

Query: 250 KGY-----VCDH------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
            GY     V D             +++NV++   A     EEAL  F  +   S+ P+  
Sbjct: 323 TGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHY 382

Query: 293 TFVSVMSAC---LCPRVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDEAC 343
           T+ +V++AC      ++G Q H   +K GF      E+   V N+ + MY   G I +  
Sbjct: 383 TYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGA 442

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
            +F R+  +D VSWN MI  YAQ    + A+L +  M     RPD  T   +L++ G   
Sbjct: 443 KVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSG 502

Query: 404 MVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTL 458
           +V+       +    +GII        +I    +   +K+  ++  NM    + + W +L
Sbjct: 503 LVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASL 562

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +    L+     G     +L   EL PD     V LS+
Sbjct: 563 LGACRLHKNIDMGEWAAGKLF--ELDPDNSGPYVLLSN 598



 Score = 45.4 bits (106), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 78/181 (43%), Gaps = 24/181 (13%)

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT--AVLSACSHAGLVDDGT 609
           +T   N L+SAYA+ G   +A   F  M       P + TF+  A+LSAC+  G  DD  
Sbjct: 49  ETFLLNTLLSAYARLGSLHDARRVFDGM-------PHRNTFSYNALLSACARLGRADDAL 101

Query: 610 RIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---F 664
            +F       G IP  D  S   ++  L + G   +A R + + H      N ++     
Sbjct: 102 ALF-------GAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASAL 154

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGV 722
           SACA+    R G  +  L+ +       VY+   L ++YA     EEA  + + +    +
Sbjct: 155 SACASEKASRTGEQVHALVTKSSHGS-DVYIGTALVDMYAKCERPEEAQKVFDAMPERNI 213

Query: 723 I 723
           +
Sbjct: 214 V 214


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 172/533 (32%), Positives = 295/533 (55%), Gaps = 14/533 (2%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGL 266
           RQ+H+ +   G      ++  LI    + G++  A +VF++  +  V     +N ++ G 
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQV---FPWNAIIRGY 94

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYT 323
           +     ++AL+ +  M +A + P   TF  ++ AC      ++G  VHAQ  + GFEA  
Sbjct: 95  SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154

Query: 324 SVSNAAITMYSSCGKIDEACMIFA--RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
            V N  I +Y+ C ++  A  +F    L E+ IVSW  ++S YAQ      A+  + +M+
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214

Query: 382 SVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIK 438
            + ++PD     S+L +   ++ +E    IHA V   G+ T   +  +L + YAK  ++ 
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A  +F  M   N+I WN +I+G+  NGF    +  F E++  ++RPD  +++ A+S+CA
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           ++ SL   + +  YV +++    + + +A+I ++AKCG ++C+  VF+  +++D + W+A
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +I  Y  HG+ +EA+S ++AM+  G + P+  TF  +L AC+H+G+V +G   F+ M  D
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDG-VHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-D 452

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +   P + H +C++DLLGRAG+LD+A  VI    +Q     W AL SAC  H ++ LG+ 
Sbjct: 453 HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKY 512

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  L   +      YV LSN+YAAA LW+  A +R  +K  G+ K  GCSW+
Sbjct: 513 AAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 565



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 214/449 (47%), Gaps = 10/449 (2%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T  + A +  G + +A +VFD +P   +  +NA+I G + N +    + ++ +M    V 
Sbjct: 57  TKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVS 116

Query: 187 RDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
            D+++F  +L  C  GL  L+ GR +H+ V + GF   V V N LI +Y  C  +  A  
Sbjct: 117 PDSFTFPHLLKAC-GGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCART 175

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VFE         +S+  ++   A  G   EAL  F  M    ++P  +  VSV++A  C 
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCL 235

Query: 305 R---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
           +    G  +HA  MK G E    +  +  TMY+ CG++  A ++F +++  +++ WN MI
Sbjct: 236 QDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII 418
           S YA+    + AI  + EM +  +RPD  +  S +   A  G +E    +  +V  +   
Sbjct: 296 SGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYR 355

Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
            ++ +S+ALI  +AK   ++ A  +F     R+++ W+ +I G+ L+G   + +  +  +
Sbjct: 356 DDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAM 415

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
               + P++ T    L +C     +R G      +  + +  +      +I L  + G L
Sbjct: 416 ERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHL 475

Query: 539 DCSLRVFNMM-IEKDTISWNALISAYAQH 566
           D +  V   M ++     W AL+SA  +H
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKH 504



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 209/461 (45%), Gaps = 52/461 (11%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +  +  +   N  +   SR+ H+QDAL ++ ++  + ++ PD ++    L AC  L +  
Sbjct: 78  DLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLA-RVSPDSFTFPHLLKACGGLSHLQ 136

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD--VYSWTTFLSA 132
            G  +HA   R G +A   V N +++LY   R L   + VF  +  P+  + SWT  +SA
Sbjct: 137 MGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSA 196

Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
                   YA                       +NG     + +F +M K+DV+ D  + 
Sbjct: 197 --------YA-----------------------QNGEPVEALEIFSQMRKMDVKPDCVAL 225

Query: 193 ASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
            SVL+       LE GR +H+ V K G      ++ +L TMY  CG V  A  +F++ K 
Sbjct: 226 VSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKS 285

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
              + I +N M+ G A  G  ++A+  F +M+   +RP  ++  S +SA  C +VG    
Sbjct: 286 --PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISA--CAQVGSLEQ 341

Query: 312 AQAM-----KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           A+ M     +S +     +S+A I M++ CG ++ A  +F R  ++D+V W+ MI  Y  
Sbjct: 342 ARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGL 401

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN-----GIITNI 421
               R AI  Y  M+  G+ P++ TF  LL +     MV     + F N      I    
Sbjct: 402 HGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR--EGWWFFNRMADHKINPQQ 459

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIIT-WNTLING 461
           Q    +I    +   + QAY++   M  +  +T W  L++ 
Sbjct: 460 QHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 166/344 (48%), Gaps = 15/344 (4%)

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           GI  D F + SL+ SS     +  IHA + + G+  +  +   LI A +    I  A Q+
Sbjct: 17  GIHSDSF-YASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQV 75

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F ++    +  WN +I G+  N      L  +S++ ++ + PD +T    L +C  +S L
Sbjct: 76  FDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHL 135

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN--MMIEKDTISWNALIS 561
           + G+ +H  V +    + + + N +I LYAKC  L C+  VF    + E+  +SW A++S
Sbjct: 136 QMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVS 195

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           AYAQ+GE  EA+  F  M+ +  +KPD     +VL+A +    ++ G  I  S++   G 
Sbjct: 196 AYAQNGEPVEALEIFSQMRKMD-VKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK-MGL 253

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGNLRLGRI 678
               D L  +  +  + G +  A+ + +    + +S N   W A+ S  A +G  +    
Sbjct: 254 ETEPDLLISLNTMYAKCGQVATAKILFD----KMKSPNLILWNAMISGYAKNGFAKDAID 309

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKRT 720
           +   ++ ++  +P    + S I A A  G  E+A  + E + R+
Sbjct: 310 LFHEMINKDV-RPDTISITSAISACAQVGSLEQARWMDEYVSRS 352


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 191/616 (31%), Positives = 319/616 (51%), Gaps = 25/616 (4%)

Query: 132 ACTKMGHVDYACEVFDKMPDR--DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           AC+++     A  VFDKMP R  ++ ++N +I     NG  +  I L+ +M    +  + 
Sbjct: 63  ACSEL---KIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNR 119

Query: 190 YSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           ++F  VL  C A L E   GR++H  + +      V V  AL+  Y  CG + DA +VF+
Sbjct: 120 FTFPFVLKACSA-LKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFD 178

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CP 304
             K +  D +++N M+ G +      + + R    +   + P+  T V V+ A       
Sbjct: 179 --KMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSL 236

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST 363
           R G ++H   ++ GF     V    + +Y  C  ID A  IF  +   K+ V+W+ M+  
Sbjct: 237 RHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF--------IEMVEMIHAFVFIN 415
           Y   +  R A+  + ++  + ++ D     ++  ++          +     +H +   +
Sbjct: 297 YVVCDFMREALELFCQL--LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS 354

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G + ++ V N L+S YAK   I  A + F+ M  R+ +++  +I+G++ NG   +GL+ F
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
            E+ +S + P++ TL+  L +CA ++ L +G   H Y +     +   + NA+I +YAKC
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G +D + +VF+ M ++  +SWN +I AY  HG G EA+  F  MQ  G +KPD  TF  +
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEG-LKPDDVTFICL 533

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           +SACSH+GLV +G   F++M  D+G IP  +H +CM+DLL RAG   E    I    ++ 
Sbjct: 534 ISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEP 593

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
               W AL SAC  + N+ LG  ++  + +   +    +VLLSN+Y+A G W++AA +R 
Sbjct: 594 DVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRF 653

Query: 716 LLKRTGVIKQPGCSWI 731
             K  G  K PGCSWI
Sbjct: 654 TQKEQGFEKSPGCSWI 669



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 230/460 (50%), Gaps = 27/460 (5%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ +Y  C  +  A  VF++      + + +N+++   A  G  EEA+  +  ML   + 
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+  TF  V+ AC   +    G ++H    +   E+   VS A +  Y+ CG +D+A  +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F ++ ++D+V+WN+MIS ++        +   L      + P+  T   +L +   +  +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSL 236

Query: 406 ---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLING 461
              + IH F    G + ++ V   ++  Y K + I  A +IF  M   +N +TW+ ++  
Sbjct: 237 RHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296

Query: 462 FLLNGFPVQGLQHFSELLMSELRPD-----EYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           +++  F  + L+ F +LLM  L+ D       TL+  +  CA ++ L  G  +H Y +K+
Sbjct: 297 YVVCDFMREALELFCQLLM--LKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS 354

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
             +  + +GN ++++YAKCG ++ ++R FN M  +D +S+ A+IS Y Q+G  +E +  F
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMF 414

Query: 577 KAMQDVGRIKPDQATFTAVLSACSH-AGLVDDGTRIFDSMVNDYGFIPA--EDHLSC--M 631
             MQ  G I P++AT  +VL AC+H AGL       + S  + Y  I     D + C  +
Sbjct: 415 LEMQLSG-INPEKATLASVLPACAHLAGLH------YGSCSHCYAIICGFTADTMICNAL 467

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           +D+  + G +D A +V +  H +    +W  +  A   HG
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIV-SWNTMIIAYGIHG 506



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 152/608 (25%), Positives = 274/608 (45%), Gaps = 60/608 (9%)

Query: 25  NISLANL-----SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           N+ L NL     + +G Y++A+ L+ ++   + + P+ ++    L AC+ L+ A+ G ++
Sbjct: 83  NVVLWNLLIRAYAWNGPYEEAIDLYYKM-LGYGITPNRFTFPFVLKACSALKEASEGREI 141

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H    R  L++  +V+  ++  Y     L   K VF ++   DV +W             
Sbjct: 142 HCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAW------------- 188

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCT--ENGYEDIGIGLFREMHKLDVRRDNYSFASVL- 196
                             N+MI+G +  E  Y+++   L  +M   DV  ++ +   VL 
Sbjct: 189 ------------------NSMISGFSLHEGSYDEVA-RLLVQMQN-DVSPNSSTIVGVLP 228

Query: 197 SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           +V     L  G+++H    + GF   V V   ++ +Y  C  +  A ++F +  G V + 
Sbjct: 229 AVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIF-DMMGIVKNE 287

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVAS---LRPSELTFVSVMSAC---LCPRVGYQV 310
           ++++ M+        + EAL  F  +L+     +  S +T  +V+  C        G  +
Sbjct: 288 VTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCL 347

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A+KSGF     V N  ++MY+ CG I+ A   F  +  +D VS+  +IS Y Q    
Sbjct: 348 HCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNS 407

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNAL 427
              +  +LEMQ  GI P++ T  S+L +   +  +      H +  I G   +  + NAL
Sbjct: 408 EEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNAL 467

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  YAK  +I  A ++F  M  R I++WNT+I  + ++G  ++ L  F  +    L+PD+
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVF 545
            T    +S+C+    +  GK     + ++  +I +M     M+ L ++ G   +    + 
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587

Query: 546 NMMIEKDTISWNALISA--YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
            M +E D   W AL+SA    ++ E  E VS  K +Q +G        F  + +  S  G
Sbjct: 588 KMPLEPDVRVWGALLSACRVYKNVELGEGVS--KKIQKLG--PESTGNFVLLSNMYSAVG 643

Query: 604 LVDDGTRI 611
             DD  ++
Sbjct: 644 RWDDAAQV 651



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 17/174 (9%)

Query: 491 SVALSSCARISSLRHGKQIHGYVLK-------NNLISKMSLGNAMITLYAKCGDLDCSLR 543
           +V L SC +  SL  GK IH ++LK        NL +       ++ LY  C +L  +  
Sbjct: 13  TVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARH 72

Query: 544 VFNMMIE--KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           VF+ M    K+ + WN LI AYA +G  +EA+  +  M   G I P++ TF  VL ACS 
Sbjct: 73  VFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYG-ITPNRFTFPFVLKACSA 131

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQH 652
                +G  I      D   +  E ++   + ++D   + G LD+A+ V +  H
Sbjct: 132 LKEASEGREIH----CDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMH 181


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 206/759 (27%), Positives = 359/759 (47%), Gaps = 50/759 (6%)

Query: 17   SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
            S+  L+  N  ++  S +G  ++   +  QI     LKP++ + ++ +  C  ++    G
Sbjct: 407  SQPDLVTWNALISGYSLNGFDKEVFEVLRQILE-MGLKPNVSTFASIIPLCTRMKCLDIG 465

Query: 77   NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
              +H + +++G  +   +   ++S+Y    +L   + +F      +V  W + +SA  + 
Sbjct: 466  KSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 525

Query: 137  GHVDYACEVFDKMPDRDLP---VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN---- 189
                 A ++F +M   ++    V    I  C EN   +   G     H +  R D+    
Sbjct: 526  QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENS-ANFWXGKSLHAHVMKYRLDSQLSV 584

Query: 190  ---------------------YSFASVLSVCDA-----GLLEFGRQ------LHSLVTKS 217
                                 Y      S  D+     G++  GR       L  L  K+
Sbjct: 585  ATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIMSMGRPFFWVRLLMHLAIKT 644

Query: 218  G--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
            G  F   +++ NAL+  Y +CG +  + K+F+  K  + + IS+N ++ G    G  ++A
Sbjct: 645  GKEFDSXLNISNALLAFYSDCGKLSSSFKLFQ--KMPLRNAISWNTLISGCVHNGDTKKA 702

Query: 276  LIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITM 332
            +     M    +    +T +S++  C        G  +H  A+K+GF    S+ NA I+M
Sbjct: 703  VALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISM 762

Query: 333  YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
            Y +CG I+    +F  +  + IVSWN +I+ Y    L    + ++ +M   G +P+  T 
Sbjct: 763  YFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTL 822

Query: 393  GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
             +LL S   +   + IHAF    G+I    +  +LIS YA+ E I     +F      +I
Sbjct: 823  LNLLPSCXTLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDI 882

Query: 453  ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
              WN +++ ++      + +  F ELL + + PD  T    +S+C ++SSL     +  Y
Sbjct: 883  ALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAY 942

Query: 513  VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            V++      + + NA+I L+A+CG++  + ++F  +  KD +SW+ +I+ Y  HG+ + A
Sbjct: 943  VIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAA 1002

Query: 573  VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
            ++    M+  G +KPD  T+ +VLSACSH G +D G  IF+SMV + G     +H +CM+
Sbjct: 1003 LALLSQMRLSG-MKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMV 1060

Query: 633  DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
            DLLGR G L+EA   +     +       +L  AC  HGN++LG  I  LL E +     
Sbjct: 1061 DLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSG 1120

Query: 693  VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             YV+L NIYAAAG W +A  +R  ++   + K PG S +
Sbjct: 1121 SYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLV 1159



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 178/747 (23%), Positives = 322/747 (43%), Gaps = 115/747 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +  L   G ++D L ++++         D ++    + AC+ L        +H   L
Sbjct: 314 NLMIRRLCDHGLFEDVLCVYLKCRVL-GCPSDDFTFPFVIKACSALGAVWIAEGVHCIVL 372

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R   +    +   ++  Y     +V  + V  +I  PD+ +W                  
Sbjct: 373 RTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTW------------------ 414

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                        NA+I+G + NG++     + R++ ++ ++ +  +FAS++ +C     
Sbjct: 415 -------------NALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKC 461

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G+ +H  V KSGFS    +  ALI+MY   GN+  A  +F+ A     + + +N M+
Sbjct: 462 LDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEK--NVVIWNSMI 519

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A   +  EA   F+ ML A+++P+ +TFVS++  C        G  +HA  MK   +
Sbjct: 520 SAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLD 579

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  SV+ A ++MY+  G  + A  IF ++  K     ++MIS Y   ++GR      L M
Sbjct: 580 SQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISGYGIMSMGRPFFWVRLLM 638

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
                   EF                            + + +SNAL++ Y+   ++  +
Sbjct: 639 HLAIKTGKEFD---------------------------SXLNISNALLAFYSDCGKLSSS 671

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +++F  M  RN I+WNTLI+G + NG   + +    ++   ++  D  TL   +  C   
Sbjct: 672 FKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVX 731

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            +L  G  +HGY +K      +SL NA+I++Y  CGD++    +F +M  +  +SWNALI
Sbjct: 732 ENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALI 791

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS--------HAGLVDDG---- 608
           + Y  H    E ++ F  M   G+ KP+  T   +L +C         HA  V  G    
Sbjct: 792 TGYRFHYLQNEVMASFCQMIXEGQ-KPNYVTLLNLLPSCXTLLQGKSIHAFAVRTGVIVE 850

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA-ERVINSQHIQARSDN-------- 659
           T I  S+++ Y      ++++  + L    G  D A    I S ++Q ++          
Sbjct: 851 TPIITSLISMYARF---ENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCE 907

Query: 660 ------------WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN----IYAA 703
                       + +L SAC    +L L   +   ++++  DK   ++++SN    ++A 
Sbjct: 908 LLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDK---HIVISNALIDLFAR 964

Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSW 730
            G    A  I E     G+  +   SW
Sbjct: 965 CGNISIAKKIFE-----GLSSKDAVSW 986



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 141/270 (52%), Gaps = 4/270 (1%)

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G  + A   F  +++  +   N MI       L    +  YL+ + +G   D+FTF  ++
Sbjct: 293 GAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVI 352

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              ++ G + + E +H  V       N+ +  AL+  YAK  R+ +A  +   +S  +++
Sbjct: 353 KACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLV 412

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           TWN LI+G+ LNGF  +  +   ++L   L+P+  T +  +  C R+  L  GK IHG+V
Sbjct: 413 TWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFV 472

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           +K+   S   L  A+I++YA  G+L  +  +F+   EK+ + WN++ISAYAQ+ +  EA 
Sbjct: 473 VKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAF 532

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
             F+ M     ++P+  TF +++  C ++ 
Sbjct: 533 KMFQQMLK-ANMQPNVVTFVSIIPCCENSA 561


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1134

 Score =  308 bits (790), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 178/528 (33%), Positives = 284/528 (53%), Gaps = 15/528 (2%)

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           ++ SG + + S  N LI MY  C   + A KVF+       + +S+  +M G    G + 
Sbjct: 397 LSGSGLNLITS--NYLIDMYCKCREQLIAYKVFDSMPER--NVVSWTALMSGHVLNGDLN 452

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
            +L  F +M    + P+E TF + + AC        G Q+H   +K GFE    V N+ +
Sbjct: 453 GSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLV 512

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI--RPD 388
            MYS CG+I+EA  +F  +  + ++SWN MI+ Y     G  A+  +  MQ   I  RPD
Sbjct: 513 DMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPD 572

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFVFINGI--ITNIQVSNALISAYAKNERIKQAYQI 443
           EFT  SLL   +S+G I   + IH F+  +G    ++  ++ +L+  Y K   +  A + 
Sbjct: 573 EFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKA 632

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  +  + +I+W++LI G+   G  V+ +  F  L     + D + LS  +   A  + L
Sbjct: 633 FDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALL 692

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           + GKQ+   V+K     + S+ N+++ +Y KCG +D + + F  M  KD ISW  +I+ Y
Sbjct: 693 QQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGY 752

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
            +HG GK+AVS F  M     I+PD+  + AVLSACSH+G++ +G  +F  ++   G  P
Sbjct: 753 GKHGLGKKAVSIFNKMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKP 811

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H +C++DLLGRAG L EA+ ++++  I+     W  L S C  HG++ LG+ +  +L
Sbjct: 812 RVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 871

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L  +   P+ YV++SN+Y  AG W E  N REL    G+ K+ G SW+
Sbjct: 872 LRIDGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWV 919



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/515 (27%), Positives = 240/515 (46%), Gaps = 53/515 (10%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A +VFD MP+R++  + A+++G   NG  +  + LF EM +  +  + ++F++ L  C  
Sbjct: 423 AYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKAC-- 480

Query: 202 GL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           GL   LE G Q+H    K GF  +V V N+L+ MY  CG + +A KVF    G     IS
Sbjct: 481 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSL--IS 538

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASL--RPSELTFVSVMSACLCPRV---GYQVHAQ 313
           +N M+ G    G    AL  F  M  A +  RP E T  S++ AC    +   G Q+H  
Sbjct: 539 WNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 598

Query: 314 AMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
            ++SGF   +S  ++ + + +Y  CG +  A   F +++EK ++SW+++I  YAQ     
Sbjct: 599 LVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFV 658

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  +  +Q +  + D F   S++   A    ++  + + A V          VSN+L+
Sbjct: 659 EAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLV 718

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K   + +A + F  M  +++I+W  +I G+  +G   + +  F+++L   + PDE 
Sbjct: 719 DMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEV 778

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
                LS+C+    ++ G+++   +L+   I         +  YA   DL          
Sbjct: 779 CYLAVLSACSHSGMIKEGEELFSKLLETQGI------KPRVEHYACVVDL---------- 822

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
                           + G  KEA    K + D   IKP+   +  +LS C   G ++ G
Sbjct: 823 --------------LGRAGRLKEA----KHLVDTMPIKPNVGIWQTLLSLCRVHGDIELG 864

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
             +   ++   G  PA  +   M +L G+AGY +E
Sbjct: 865 KEVGKILLRIDGKNPA--NYVMMSNLYGQAGYWNE 897



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 208/442 (47%), Gaps = 51/442 (11%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G    +L LF ++     + P+ ++ ST L AC  L     G Q+H + L+ G +    
Sbjct: 448 NGDLNGSLSLFTEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 506

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N+++ +Y                               +K G ++ A +VF  M  R 
Sbjct: 507 VGNSLVDMY-------------------------------SKCGRINEAEKVFRWMVGRS 535

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMH--KLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
           L  +NAMI G    GY    +  F  M   K+  R D ++  S+L  C + G++  G+Q+
Sbjct: 536 LISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQI 595

Query: 211 HSLVTKSGFSCLVS--VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           H  + +SGF C  S  +  +L+ +Y  CGN+  A K F++ K      IS++ ++ G A 
Sbjct: 596 HGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTM--ISWSSLILGYAQ 653

Query: 269 VGRVEEALIRFRDMLVASLRPSEL---TFVSVMSACLCPRVGYQVHAQAMK--SGFEAYT 323
            G   EA+  F+ +   S +       + + V +     + G Q+ A  +K  SG E  T
Sbjct: 654 EGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLE--T 711

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SVSN+ + MY  CG +DEA   FA +Q KD++SW  MI+ Y +  LG+ A+  + +M   
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771

Query: 384 GIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            I PDE  + ++L++   SG I E  E+    +   GI   ++    ++    +  R+K+
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKE 831

Query: 440 AYQIFHNMSPR-NIITWNTLIN 460
           A  +   M  + N+  W TL++
Sbjct: 832 AKHLVDTMPIKPNVGIWQTLLS 853



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G + +A+ LF ++      + D + LS+ +   A+      G Q+ A  ++      
Sbjct: 652 AQEGDFVEAMGLFKRLQELSS-QIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLE 710

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
             V+N+++ +Y     +   ++ F+E+Q  DV SWT  ++   K G    A  +F+KM  
Sbjct: 711 TSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLR 770

Query: 150 --PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
              + D   Y A+++ C+ +G    G  LF ++
Sbjct: 771 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKL 803


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 203/717 (28%), Positives = 354/717 (49%), Gaps = 48/717 (6%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N  + +LS  G ++  L  F  +  ++KL PD ++  + L ACA+L+  +FG  +H   
Sbjct: 14  FNSHINHLSSHGDHKQVLSTFSSM-LANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L  G  +  ++++++++LY                                K G + +A 
Sbjct: 73  LVNGFSSDFYISSSLVNLY-------------------------------AKFGLLAHAR 101

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VF++M +RD+  + AMI   +  G       L  EM    ++    +   +LS    G+
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS----GV 157

Query: 204 LEFGRQ--LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           LE  +   LH      GF C ++V+N+++ +Y  C +V DA  +F++ +    D +S+N 
Sbjct: 158 LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR--DMVSWNT 215

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS--ACLCP-RVGYQVHAQAMKSG 318
           M+ G ASVG + E L     M    LRP + TF + +S    +C   +G  +H Q +K+G
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F+    +  A ITMY  CGK + +  +   +  KD+V W  MIS   +      A++ + 
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335

Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           EM   G         S++AS    G  ++   +H +V  +G   +    N+LI+ YAK  
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DEYTLSVAL 494
            + ++  IF  M+ R++++WN +I+G+  N    + L  F E+    ++  D +T+   L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            +C+   +L  GK IH  V+++ +     +  A++ +Y+KCG L+ + R F+ +  KD +
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SW  LI+ Y  HG+G  A+  +      G ++P+   F AVLS+CSH G+V  G +IF S
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSG-MEPNHVIFLAVLSSCSHNGMVQQGLKIFSS 574

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           MV D+G  P  +HL+C++DLL RA  +++A +       +   D    +  AC A+G   
Sbjct: 575 MVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +  II   ++E +      YV L + +AA   W++ +     ++  G+ K PG S I
Sbjct: 635 VEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 206/479 (43%), Gaps = 50/479 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +  G+  + L L  ++     L+PD  +   +L+    + +   G  LH
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTMCDLEMGRMLH 268

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              ++ G     H+   ++++Y       +  RV   I N DV  WT  +S   ++G  +
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A           L V++ M+   ++   E I                    ASV++ C 
Sbjct: 329 KA-----------LIVFSEMLQSGSDLSSEAI--------------------ASVVASCA 357

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G  + G  +H  V + G++     +N+LITMY  CG++  +  +FE       D +S+
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER--DLVSW 415

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQVHAQAM 315
           N ++ G A    + +AL+ F +M   +++  +  T VS++ AC       VG  +H   +
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +S     + V  A + MYS CG ++ A   F  +  KD+VSW  +I+ Y     G  A+ 
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAY 431
            Y E    G+ P+   F ++L+S     MV+    +  + V   G+  N +    ++   
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLL 595

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDE 487
            + +RI+ A++ +     R  I     + G +L+     G     +++   M EL+P +
Sbjct: 596 CRAKRIEDAFKFYKENFTRPSID----VLGIILDACRANGKTEVEDIICEDMIELKPGD 650


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 181/512 (35%), Positives = 275/512 (53%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M  G A       A+  +  M+   L P+  TF  ++ +C   +V   G Q+H   +
Sbjct: 71  WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130

Query: 316 KSGFE----AYTS-----VSN----------------------AAITMYSSCGKIDEACM 344
           K G+E     +TS     V N                      A IT Y+S G I+ A  
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  +  KD+VSWN +IS YA     + A+  + EM    ++PDE T  +++   A SG 
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           I++   +H+++  +G+ +N+++ NALI  Y+K   ++ A  +F  +S +++I+WNT+I G
Sbjct: 251 IQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGG 310

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S   P++ T+   L +CA++ ++  G+ IH Y+ K    + 
Sbjct: 311 YTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVT 370

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VFN M  +   + NA+I  +A HG    A   F  M
Sbjct: 371 NASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRM 430

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +  G I+PD  TF  +LSACSH+G++D G RIF SM  +Y   P  +H  CM+DLLG  G
Sbjct: 431 RKNG-IEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLG 489

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +IN+  ++     W +L  AC  HGN+ LG   A  L++ E + P  YVLLSN
Sbjct: 490 LFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSN 549

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E ANIR LL   G+ K PGCS I
Sbjct: 550 IYATAGRWNEVANIRALLNDKGMKKVPGCSSI 581



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 262/546 (47%), Gaps = 50/546 (9%)

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDV----YSWTTFLSACTKMGHVD---YACEVFDKMPD 151
           LSL  N + L S++ + +++    +    Y+ +  L  C    + D   YA  VF+ + +
Sbjct: 6   LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
            +L ++N M  G   +      I L+  M  L +  ++Y+F  +L  C    + + G+Q+
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-----------------EAKGY- 252
           H  V K G+   + V  +LI+MY   G   DA KVF+                  ++GY 
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185

Query: 253 -----------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                      V D +S+N ++ G A  G  +EAL  F++M+  +++P E T V+V+SAC
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245

Query: 302 L---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                 ++G QVH+     G  +   + NA I +YS CG+++ AC +F  L  KD++SWN
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV--F 413
           TMI  Y   NL + A+L + EM   G  P++ T  S+L   A  G I+    IH ++   
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           I G+     +  +LI  YAK   I+ A+Q+F++M  R +   N +I GF ++G       
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFD 425

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLY 532
            FS +  + + PD+ T    LS+C+    L  G++I   + +N  I+ K+     MI L 
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLL 485

Query: 533 AKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
              G    +  + N M +E D + W +L+ A   HG  +   S     Q + +I+P+   
Sbjct: 486 GHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGES---FAQKLIKIEPENPG 542

Query: 592 FTAVLS 597
              +LS
Sbjct: 543 SYVLLS 548



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 237/457 (51%), Gaps = 19/457 (4%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSV 111
           L P+ Y+    L +CA L+ +  G Q+H + L+ G +   +V  +++S+Y KN R     
Sbjct: 99  LLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGR-WKDA 157

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
            +VF    + DV S+T  ++     G+++ A ++FD++P +D+  +NA+I+G  + G   
Sbjct: 158 HKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNK 217

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
             + LF+EM K +V+ D  +  +V+S C  +G ++ GRQ+HS +   G    + +VNALI
Sbjct: 218 EALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALI 277

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            +Y  CG V  AC +F+       D IS+N M+ G   +   +EAL+ F++ML +   P+
Sbjct: 278 DLYSKCGEVETACGLFQGLSNK--DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPN 335

Query: 291 ELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           ++T +S++ AC        G  +H    K   G    +S+  + I MY+ CG I+ A  +
Sbjct: 336 DVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQV 395

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI 402
           F  +  + + + N MI  +A      +A   +  M+  GI PD+ TF  LL++   SG +
Sbjct: 396 FNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 455

Query: 403 EMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLI 459
           ++   I   +  N  IT  ++    +I         K+A ++ + M+  P  +I W +L+
Sbjct: 456 DLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVI-WCSLL 514

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
               ++G  V+  + F++ L+ ++ P+     V LS+
Sbjct: 515 KACKMHG-NVELGESFAQKLI-KIEPENPGSYVLLSN 549



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 227/501 (45%), Gaps = 91/501 (18%)

Query: 310 VHAQAMKSGFEAYTSVSNAAIT-------MYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
           +HAQ +K+G       +N A++       +  +   +  A  +F  +QE +++ WNTM  
Sbjct: 21  IHAQMIKTGLHN----TNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFR 76

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIIT 419
            +A  +   SAI  Y+ M S+G+ P+ +TF  LL S   +++    + IH  V   G   
Sbjct: 77  GHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYEL 136

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPR----------------------------- 450
           ++ V  +LIS Y KN R K A+++F   S R                             
Sbjct: 137 DLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP 196

Query: 451 --NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
             ++++WN +I+G+   G   + L  F E++ + ++PDE T+   +S+CA+  S++ G+Q
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ 256

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H ++  + L S + + NA+I LY+KCG+++ +  +F  +  KD ISWN +I  Y     
Sbjct: 257 VHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNL 316

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDYGFIPAE 625
            KEA+  F+ M   G   P+  T  ++L AC+  G +D G  I    D  +   G   A 
Sbjct: 317 YKEALLLFQEMLRSGE-NPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIK--GVTNAS 373

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQH--------------------------------- 652
              + ++D+  + G ++ A +V NS H                                 
Sbjct: 374 SLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKN 433

Query: 653 -IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV--YVLLSNIYAAAGLWEE 709
            I+     +  L SAC+  G L LGR I   + +  +  P +  Y  + ++    GL++E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKE 493

Query: 710 AANIRELLKRTGVIKQPGCSW 730
           A    E +  T  ++  G  W
Sbjct: 494 A----EEMINTMTMEPDGVIW 510



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 40/348 (11%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGII-TNIQVSNAL-ISAYAKN-ERIKQAYQIFHNMSPR 450
           SLL +   ++ + +IHA +   G+  TN  +S  L     + N + +  A  +F  +   
Sbjct: 7   SLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEP 66

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N++ WNT+  G  L+  PV  ++ +  ++   L P+ YT    L SCA++   + G+QIH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIH 126

Query: 511 GYVLK----------NNLISKMSLGN----------------------AMITLYAKCGDL 538
           G+VLK           +LIS M + N                      A+IT YA  G +
Sbjct: 127 GHVLKLGYELDLYVHTSLIS-MYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + + ++F+ +  KD +SWNA+IS YA  G  KEA+  FK M     +KPD++T   V+SA
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT-NVKPDESTMVTVVSA 244

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           C+ +G +  G ++  S ++D+G       ++ ++DL  + G ++ A  +   Q +  +  
Sbjct: 245 CAQSGSIQLGRQV-HSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLF--QGLSNKDV 301

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
             W        H NL    ++    + R  + P+   +LS + A A L
Sbjct: 302 ISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQL 349


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 200/595 (33%), Positives = 309/595 (51%), Gaps = 35/595 (5%)

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFASVLSVCDAGL 203
            FD + +RD+  +N MI+G    G     I  F   M    +  D  +F SVL  C   +
Sbjct: 41  TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI 100

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G ++H L  K GF   V V  +LI +Y     V +A  +F+E    V D  S+N M+
Sbjct: 101 --DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP--VRDMGSWNAMI 156

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
            G    G  +EAL      L   LR  + +T VS++SAC        G  +H+ ++K G 
Sbjct: 157 SGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 211

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E+          +   C K+      F R+  +D++SWN++I  Y        AI  + E
Sbjct: 212 ES---------ELLRDCQKV------FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 256

Query: 380 MQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING-IITNIQVSNALISAYAKNE 435
           M+   I+PD  T     S+L+  G I     +  F    G  + +I + NA++  YAK  
Sbjct: 257 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 316

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVAL 494
            +  A  +F+ +   ++I+WNT+I+G+  NGF  + ++ ++ +    E+  ++ T    L
Sbjct: 317 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 376

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            +C++  +LR G ++HG +LKN L   + +  ++  +Y KCG L+ +L +F  +   +++
Sbjct: 377 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 436

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
            WN LI+ +  HG G++AV  FK M D G +KPD  TF  +LSACSH+GLVD+G   F+ 
Sbjct: 437 PWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCFEM 495

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M  DYG  P+  H  CM+D+ GRAG L+ A + I S  +Q  +  W AL SAC  HGN+ 
Sbjct: 496 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 555

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           LG+I +  L E E +    +VLLSN+YA+AG WE    IR +    G+ K PG S
Sbjct: 556 LGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 610



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 261/585 (44%), Gaps = 71/585 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   R+G+  + +  F     S  L PD  +  + L AC   R    GN++H  AL
Sbjct: 54  NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLAL 110

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G     +VA +++ LY            +  + N  +                     
Sbjct: 111 KFGFMWDVYVAASLIHLYSR----------YKAVGNARI--------------------- 139

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +FD+MP RD+  +NAMI+G  ++G     + L   +  +    D+ +  S+LS C +AG 
Sbjct: 140 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 195

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
              G  +HS   K G    +               + D  KVF+  + YV D IS+N ++
Sbjct: 196 FNRGVTIHSYSIKHGLESEL---------------LRDCQKVFD--RMYVRDLISWNSII 238

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSG-F 319
                  +   A+  F++M ++ ++P  LT +   S++S     R    V    ++ G F
Sbjct: 239 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 298

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               ++ NA + MY+  G +D A  +F  L   D++SWNT+IS YAQ      AI  Y  
Sbjct: 299 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 358

Query: 380 MQSVG-IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G I  ++ T+ S+L   + +G +     +H  +  NG+  ++ V  +L   Y K  
Sbjct: 359 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 418

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           R++ A  +F+ +   N + WNTLI     +G   + +  F E+L   ++PD  T    LS
Sbjct: 419 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 478

Query: 496 SCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDT 553
           +C+    +  G+     +  +  +   +     M+ +Y + G L+ +L+ + +M ++ D 
Sbjct: 479 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 538

Query: 554 ISWNALISAYAQHGEGKEAVSCFK-AMQDVGRIKPDQATFTAVLS 597
             W AL+SA   HG     V   K A + +  ++P+   +  +LS
Sbjct: 539 SIWGALLSACRVHGN----VDLGKIASEHLFEVEPEHVGYHVLLS 579



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSS 496
           K     F ++  R++  WN +I+G+   G   + ++ FS  ++S  L PD  T    L +
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 95

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C  +     G +IH   LK   +  + +  ++I LY++   +  +  +F+ M  +D  SW
Sbjct: 96  CRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSW 152

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           NA+IS Y Q G  KEA++    ++ +     D  T  ++LSAC+ AG  + G  I
Sbjct: 153 NAMISGYCQSGNAKEALTLSNGLRAM-----DSVTVVSLLSACTEAGDFNRGVTI 202



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 7/157 (4%)

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           +  F+ +  +D  +WN +IS Y + G   E + CF        + PD  TF +VL AC  
Sbjct: 39  MHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR- 97

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
              V DG +I   +   +GF+      + ++ L  R   +  A  + +   ++    +W 
Sbjct: 98  --TVIDGNKIH-CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWN 153

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           A+ S     GN +    ++  L  R  D  +V  LLS
Sbjct: 154 AMISGYCQSGNAKEALTLSNGL--RAMDSVTVVSLLS 188



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 18/264 (6%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++  +++G   +A+ ++  +    ++  +  +  + L AC+       G +LH
Sbjct: 333 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 392

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
              L+ GL     V  ++  +Y     L     +F +I   +   W T ++     GH +
Sbjct: 393 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 452

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            A  +F +M D     D   +  +++ C+ +G  D G   F  M      + +Y     L
Sbjct: 453 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM------QTDYGITPSL 506

Query: 197 SVCDAGLLEFGR--QLHS---LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
                 +  +GR  QL +    +         S+  AL++     GN VD  K+  E   
Sbjct: 507 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLF 565

Query: 252 YV-CDHISYNVMMDGL-ASVGRVE 273
            V  +H+ Y+V++  + AS G+ E
Sbjct: 566 EVEPEHVGYHVLLSNMYASAGKWE 589


>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
          Length = 829

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 216/721 (29%), Positives = 361/721 (50%), Gaps = 64/721 (8%)

Query: 38  QDALHLFVQIHSSHKLKP--DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           + AL L+  ++ + +  P  D Y+ S  L ACA  R    G  +HA+ LR   ++ P  A
Sbjct: 115 EHALRLYALLNHAARPTPRSDHYTYSCALTACARTRRLRLGKSVHAHLLRRA-RSLPDTA 173

Query: 96  ---NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM---GHVDYACEVFDKM 149
              N++L++Y                            ++C +    G VD    +FD M
Sbjct: 174 VLRNSLLNVY----------------------------ASCVRYRGDGSVDVVRRLFDAM 205

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQ 209
           P R+   +N +     + G     + +F  M +  ++    SF +V          +   
Sbjct: 206 PKRNAVSWNTLFGWYVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPAVAKEDPSWSFV 265

Query: 210 LHSLVTKSGFSCL--VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           L+ L+ K G   +  + VV++ I M+   G+V  A +VFE A     +   +N M+ G  
Sbjct: 266 LYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKKNTE--VWNTMITGYV 323

Query: 268 SVGRVEEALIRFRDMLVASLRPSEL-TFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
             G+  EA+     ++V+   P ++ TF+S ++A       R+G Q+H   +K G     
Sbjct: 324 QNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLIK-GMHTTL 382

Query: 324 SV--SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
            V   NA + MYS CG +  A  +F RL EKDIVSWNTMI+ + Q +     +L   +MQ
Sbjct: 383 PVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQ 442

Query: 382 SVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G   D  T  ++L++   +G + + +  H+++  +GI     + + LI  YAK+ RI+
Sbjct: 443 KSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGI-EGEGLESYLIDMYAKSGRIE 501

Query: 439 QAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            A ++F +   + R+ +TWN +I G+   G P Q +  F  ++ + L P   TL+  L +
Sbjct: 502 IAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPA 561

Query: 497 CARISS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           C  +   L  GKQIH + L+  L + + +G A++ +Y+KCG++  +  VF  M EK T+S
Sbjct: 562 CDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVS 621

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           +  +IS   QHG GK A+S F +MQ+ G +KPD  TF A +SAC+++GLVD+G  ++ SM
Sbjct: 622 YTTMISGLGQHGFGKSALSLFYSMQEKG-LKPDGVTFLAAISACNYSGLVDEGLALYRSM 680

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGN 672
              +G +    H  C++D+L +AG ++EA   +  Q +    D    W  L ++C A   
Sbjct: 681 -ETFGVVVTPQHRCCIVDMLAKAGRVEEAYEFV--QELGEEGDFVSIWGTLLASCKAQDK 737

Query: 673 LRLGRIIAGLL--LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
             L  ++   L  +E++       VLLS+I+AA G W  A ++R+ ++  G+ K  G SW
Sbjct: 738 QELVNLVTERLICIEKKYGHAGYSVLLSHIFAAEGNWSSADSLRKEMRLRGLSKMAGSSW 797

Query: 731 I 731
           I
Sbjct: 798 I 798



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 47/448 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++G + +A+ L +++  S ++  D+ +  + L A +  ++   G QLH Y +
Sbjct: 316 NTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQLHGYLI 375

Query: 85  RAGLKAYPHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +      P +  N ++ +Y    ++ +   +F  +   D+ SW                 
Sbjct: 376 KGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSW----------------- 418

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAG 202
                         N MIT   +N ++  G+ L  +M K     D  +  +VLS   + G
Sbjct: 419 --------------NTMITAFVQNDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTG 464

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G+Q HS + + G      + + LI MY   G +  A +VF++      D +++N M
Sbjct: 465 DLHIGKQAHSYLIRHGIEG-EGLESYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAM 523

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC------LCPRVGYQVHAQAMK 316
           + G    G  E+A++ FR M+ A L P+ +T  SV+ AC      LC   G Q+H  A++
Sbjct: 524 IAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLC--AGKQIHCFALR 581

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              +    V  A + MYS CG+I  A  +FA + EK  VS+ TMIS   Q   G+SA+  
Sbjct: 582 RCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSL 641

Query: 377 YLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           +  MQ  G++PD  TF + +++   SG ++    ++  +   G++   Q    ++   AK
Sbjct: 642 FYSMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCIVDMLAK 701

Query: 434 NERIKQAYQIFHNMSPRN--IITWNTLI 459
             R+++AY+    +      +  W TL+
Sbjct: 702 AGRVEEAYEFVQELGEEGDFVSIWGTLL 729


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 180/555 (32%), Positives = 300/555 (54%), Gaps = 15/555 (2%)

Query: 187 RDNY---SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD-A 242
           R NY   SF  +L+ C + L +  R +H+LV  +G    + +   LI         +D A
Sbjct: 24  RTNYHSRSFNYLLNCCSS-LPDLSR-IHALVVTNGCGQNLLLSTKLIITACCLAPTMDYA 81

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            K+F++      D   +N ++ G A  G  EEAL  + +M  A L P   TF  V+ +C 
Sbjct: 82  RKMFDQMPKR--DVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCA 139

Query: 303 ---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                R G +VH   +K GF++   V ++ + MYS  G+     ++F  +  ++IVSW  
Sbjct: 140 VLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTA 199

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFING 416
           +I+ Y Q    +  +  + EM   G +P+  T  S+L +     F+ + ++IH +    G
Sbjct: 200 VIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLG 259

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  ++ ++NALI+ Y K   ++ A  +F  M  +N+++WN +I  +  N      ++ F 
Sbjct: 260 VDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFR 319

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
            +   ++  D  T+   +S+CA + +L  G+ +H  V +  L   +S+ NA+I +YAKCG
Sbjct: 320 RMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCG 379

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           ++D +  VF  +  +  +SW ++I A A HG G++A+  F  M+D G +KP+  TF AV 
Sbjct: 380 NIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEG-VKPNSFTFAAVF 438

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           +AC H+GLV++G + F+SM+ DY  +P  +H +CM+DLLGRAG L EA   I+   ++  
Sbjct: 439 TACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPD 498

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              W AL  +C  H NL L  ++A  L   +    + YVL+SNIYA AG WE+AA +R+L
Sbjct: 499 VSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKL 558

Query: 717 LKRTGVIKQPGCSWI 731
           ++   + K PG S +
Sbjct: 559 MEERELKKIPGHSLV 573



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 245/494 (49%), Gaps = 19/494 (3%)

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
           ++AC     +DYA ++FD+MP RD+ ++N +I G  + G  +  + L+  MH   +  DN
Sbjct: 69  ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDN 128

Query: 190 YSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           Y+F  V+  C     L  G+++H  + K GF   V V ++L+ MY   G  +    VF E
Sbjct: 129 YTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGE 188

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--- 305
               V + +S+  ++ G       +E L  FR+M+ +  +P+ +T VSV+ AC       
Sbjct: 189 M--VVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLN 246

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G  +H   +K G +   S++NA I +Y  CG ++ A  +F  +  +++VSWN MI+ Y 
Sbjct: 247 LGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYE 306

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
           Q N G +A+  +  MQ+  +  D  T  S++   AS G +     +H  V   G+  N+ 
Sbjct: 307 QNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVS 366

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           ++NALI  YAK   I  A ++F  +  R++++W ++I     +G     L+ FS +    
Sbjct: 367 ITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEG 426

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCS 541
           ++P+ +T +   ++C     +  G++    ++++ +++  +     M+ L  + G L  +
Sbjct: 427 VKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEA 486

Query: 542 LRVFNMM-IEKDTISWNALISAYAQHG--EGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
               + M +E D   W AL+ +   H   E  E V+     + +  + P   TF  ++S 
Sbjct: 487 YEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVA-----EKLFLLDPQTVTFYVLMSN 541

Query: 599 C-SHAGLVDDGTRI 611
             + AG  +D  R+
Sbjct: 542 IYAEAGRWEDAARL 555



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 202/446 (45%), Gaps = 47/446 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   + +G  ++AL L+  +H +  L PD Y+    + +CA L     G ++H   +
Sbjct: 97  NTLIRGYADAGPCEEALALYSNMHGA-GLFPDNYTFPFVVRSCAVLSALREGKEVHCNIV 155

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V ++++++Y  + + + ++ VF E+   ++ SWT                 
Sbjct: 156 KHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWT----------------- 198

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
                         A+I G  +N Y   G+G+FREM     + +  +  SVL  C AGL 
Sbjct: 199 --------------AVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPAC-AGLE 243

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNV 261
            L  G+ +H    K G    VS+ NALI +Y  CGNV  A  +F+   G V  + +S+N 
Sbjct: 244 FLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFD---GMVVQNLVSWNA 300

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           M+           A+  FR M    +    +T VSV+SAC        G  +H    + G
Sbjct: 301 MIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKG 360

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
            E   S++NA I MY+ CG ID A  +F RL  + +VSW +MI   A    G  A+  + 
Sbjct: 361 LEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFS 420

Query: 379 EMQSVGIRPDEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKN 434
            M+  G++P+ FTF ++  +   SG +E   +   + +    I+  ++    ++    + 
Sbjct: 421 RMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRA 480

Query: 435 ERIKQAYQIFHNMSPR-NIITWNTLI 459
             + +AY+    M    ++  W  L+
Sbjct: 481 GSLMEAYEFIDKMPVEPDVSVWGALL 506



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 175/395 (44%), Gaps = 76/395 (19%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++ ++++ L +F ++  S   +P+  +L + L ACA L     G  +H Y ++ G
Sbjct: 201 IAGYVQNRYFKEGLGVFREMVGSGT-QPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLG 259

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +     + N +++LY                                K G+V+ A  +FD
Sbjct: 260 VDPDVSLTNALIALYG-------------------------------KCGNVETARSLFD 288

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M  ++L  +NAMI    +N      + LFR M    V  D  +  SV+S C + G L  
Sbjct: 289 GMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNT 348

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-ISYNVMMDG 265
           GR +H LV + G    VS+ NALI MY  CGN+  A +VFE      C   +S+  M+  
Sbjct: 349 GRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLP---CRSVVSWTSMIGA 405

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
            AS G  E+AL  F  M    ++P+  TF +V +AC         H+  ++ G + + S+
Sbjct: 406 CASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACR--------HSGLVEEGRKHFESM 457

Query: 326 SNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQS 382
               +  YS    ++  ACM+       D+              LGR+  L  AY  +  
Sbjct: 458 ----MRDYSIMPGVEHCACMV-------DL--------------LGRAGSLMEAYEFIDK 492

Query: 383 VGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFI 414
           + + PD   +G+LL S      +E+ E++   +F+
Sbjct: 493 MPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFL 527



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 26/290 (8%)

Query: 12  GNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           GN  T++ L        L+  N  +A   ++    +A+ LF ++ +  K+  D  ++ + 
Sbjct: 278 GNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQA-EKVDFDYITMVSV 336

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           ++ACA+L     G  +H    R GL+    + N ++ +Y    ++   + VF  +    V
Sbjct: 337 ISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSV 396

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFRE 179
            SWT+ + AC   GH + A ++F +M D  +      + A+ T C  +G  + G   F  
Sbjct: 397 VSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFES 456

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEFGR-----QLHSLVTKSGFSCLVSVVNALITMYF 234
           M +      +YS    +  C   +   GR     + +  + K      VSV  AL+    
Sbjct: 457 MMR------DYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCR 510

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGL-ASVGRVEEALIRFRDML 283
              N+  A  V E+        +++ V+M  + A  GR E+A  R R ++
Sbjct: 511 IHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDA-ARLRKLM 559


>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  308 bits (789), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 226/785 (28%), Positives = 371/785 (47%), Gaps = 97/785 (12%)

Query: 1   MLQRRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQI-HSSHKLKPDIYS 59
           ++Q R++ T      T K      +  L +L ++G   DA+     I      +KP+ Y 
Sbjct: 30  IIQPRVSFTKIHQPLTPKLKPKVTDAHLNHLCKNGRLADAIACLDAIAQGGSNVKPNTYM 89

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGL--KAYPHVANTILSLYKNARDLVSVKRVFSE 117
               L +C +  +A  G +LHA   R GL  +  P V   ++S+Y     L   ++VF E
Sbjct: 90  --QLLQSCIDQGSAELGRKLHA---RIGLLEEMNPFVETKLVSMYAKCGSLGEARKVFGE 144

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACE-VFDKMPDRDLP---VYNAMITGCTENGYEDIG 173
           ++  ++Y+W+  + A ++        +  F  M D  +P   +   ++  C   G  + G
Sbjct: 145 MRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETG 204

Query: 174 IGLFREMHKLDVR-----------------------------------RDNYSFASVLS- 197
               + +H L +R                                   RD  S+ S+++ 
Sbjct: 205 ----KLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITG 260

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY--VCD 255
            C  G LE   QL   + + G    +   N LI  Y   G   DA ++ ++ + +  V D
Sbjct: 261 YCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPD 320

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHA 312
             ++  M+ G A   R  +AL  FR+ML+A + P+ +T  S +SAC   +    G ++H+
Sbjct: 321 VFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHS 380

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K G      V N+ I MYS  G++++A  +F  + +KD+ +WN+MI  Y Q      
Sbjct: 381 VAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGK 440

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           A   +++M    + P+  T+                                NA+IS Y 
Sbjct: 441 AYDLFIKMHESDVPPNVVTW--------------------------------NAMISGYI 468

Query: 433 KNERIKQAYQIFHNMSP-----RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +N    QA  +FH M       R+  +WN+LI G+L NG   + L  F ++    +RP+ 
Sbjct: 469 QNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNS 528

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   L +CA + + +  K+IHG +L+ NL S++S+ N +I  YAK G++  +  +F  
Sbjct: 529 VTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQG 588

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD ISWN+LI+ Y  HG    A+  F  M  +G +KP + TF +++ A S +G+VD 
Sbjct: 589 ISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMG-VKPSRGTFLSIIYAFSLSGMVDK 647

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G ++F SM+ DY  +P  +H S M+DLLGR+G L EA   I    I+  S  W AL +A 
Sbjct: 648 GKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTAS 707

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP- 726
             HGN+ L       LLE E    S++  +  +YA +G +E+ + +R+  KR+   KQP 
Sbjct: 708 KIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSET-KQPL 766

Query: 727 GCSWI 731
           GCSWI
Sbjct: 767 GCSWI 771


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 171/480 (35%), Positives = 266/480 (55%), Gaps = 7/480 (1%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           +YNVM+ GLA     + AL+ F+ M   S++  + TF SV+ AC      R G QVHA  
Sbjct: 88  AYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALI 147

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +KSGF++   V N  I MY++CG+I  A  +F  + E+ IV+WN+M+S Y +  L    +
Sbjct: 148 LKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVV 207

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAY 431
             + ++  + I  D+ T  S+L + G +   E+ E+I  ++   G+  N  ++ +LI  Y
Sbjct: 208 KLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMY 267

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK  ++  A ++F  M  R+++ W+ +I+G+       + L  F E+    + P+E T+ 
Sbjct: 268 AKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMV 327

Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
             L SCA + +   GK +H Y+ K  +   ++LG  +I  YAKCG +D S+ VF  M  K
Sbjct: 328 SVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK 387

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           +  +W ALI   A +GEGK A+  F +M +   +KP+  TF  VLSACSHA LVD G  +
Sbjct: 388 NVFTWTALIQGLANNGEGKMALEFFSSMLE-NDVKPNDVTFIGVLSACSHACLVDQGRHL 446

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           F+SM  D+   P  +H  CM+D+LGRAG+L+EA + I++      +  W  L ++C AH 
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 506

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+ +       +   E      Y+LLSN YA  G  E+A  +R L+K   + K PGCS I
Sbjct: 507 NIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLI 566



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 242/483 (50%), Gaps = 15/483 (3%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           +DYA  +F+ +   +   YN MI G       D  + LF++MH+  V+ D ++F+SVL  
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 199 CD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C     L  G Q+H+L+ KSGF     V N LI MY NCG +  A  VF+         +
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSI--V 188

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           ++N M+ G    G  +E +  FR +L   +   ++T +SV+ AC       +G  +    
Sbjct: 189 AWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYI 248

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G     +++ + I MY+ CG++D A  +F  + ++D+V+W+ MIS YAQ +  + A+
Sbjct: 249 VSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEAL 308

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             + EMQ   + P+E T  S+L S    G  E  + +H ++    +   + +   LI  Y
Sbjct: 309 NLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFY 368

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
           AK   I ++ ++F  MS +N+ TW  LI G   NG     L+ FS +L ++++P++ T  
Sbjct: 369 AKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFI 428

Query: 492 VALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMI 549
             LS+C+    +  G+ +   + ++ ++  ++     M+ +  + G L+ + + + NM  
Sbjct: 429 GVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPF 488

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDG 608
             + + W  L+++   H   K      K+++ + R++P  +    +LS   +  G V+D 
Sbjct: 489 PPNAVVWRTLLASCRAH---KNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDA 545

Query: 609 TRI 611
            R+
Sbjct: 546 IRV 548



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 200/444 (45%), Gaps = 43/444 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +  L+      +AL LF ++H    ++ D ++ S+ L AC+ ++    G Q+HA  L
Sbjct: 90  NVMIRGLAFKRSPDNALLLFKKMHEK-SVQHDKFTFSSVLKACSRMKALREGEQVHALIL 148

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++G K+   V NT++ +Y N   +   + VF  +    + +W + LS             
Sbjct: 149 KSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLS------------- 195

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                             G T+NG  D  + LFR++ +L +  D+ +  SVL  C     
Sbjct: 196 ------------------GYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 237

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G  +   +   G     ++  +LI MY  CG V  A K+F+E      D ++++ M+
Sbjct: 238 LEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKR--DVVAWSAMI 295

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G A   R +EAL  F +M   ++ P+E+T VSV+ +C        G  VH    K   +
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMK 355

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              ++    I  Y+ CG ID +  +F  +  K++ +W  +I   A    G+ A+  +  M
Sbjct: 356 LTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSM 415

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNER 436
               ++P++ TF  +L++     +V+   H F  +     I   I+    ++    +   
Sbjct: 416 LENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGF 475

Query: 437 IKQAYQIFHNMS-PRNIITWNTLI 459
           +++AYQ   NM  P N + W TL+
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLL 499



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 150/308 (48%), Gaps = 14/308 (4%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAK--NERIKQAYQIFHNMSPRNIITWNTLINGF 462
           ++ +HA +     + +  ++ A++ + A    + I  A  IF+++       +N +I G 
Sbjct: 37  LQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGL 96

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
                P   L  F ++    ++ D++T S  L +C+R+ +LR G+Q+H  +LK+   S  
Sbjct: 97  AFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNE 156

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            + N +I +YA CG +  +  VF+ M E+  ++WN+++S Y ++G   E V  F+ + ++
Sbjct: 157 FVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILEL 216

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
            RI+ D  T  +VL AC     ++ G  I + +V+  G        + ++D+  + G +D
Sbjct: 217 -RIEFDDVTMISVLMACGRLANLEIGELIGEYIVSK-GLRRNNTLTTSLIDMYAKCGQVD 274

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVY----VLLS 698
            A ++ +    +     W A+ S     G  +  R    L L  E  K +VY     ++S
Sbjct: 275 TARKLFDEMD-KRDVVAWSAMIS-----GYAQADRCKEALNLFHEMQKGNVYPNEVTMVS 328

Query: 699 NIYAAAGL 706
            +Y+ A L
Sbjct: 329 VLYSCAML 336



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 14/254 (5%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++AL+LF ++   + + P+  ++ + L +CA L     G  +H Y  +  +K    +   
Sbjct: 305 KEALNLFHEMQKGN-VYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ 363

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP-- 155
           ++  Y     +     VF E+   +V++WT  +      G    A E F  M + D+   
Sbjct: 364 LIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPN 423

Query: 156 --VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYSFASVLSVCDAGLLEFGRQL 210
              +  +++ C+     D G  LF  M +   ++ R ++Y    V  +  AG LE   + 
Sbjct: 424 DVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYG-CMVDILGRAGFLE---EA 479

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMMDGLASV 269
           +  +    F     V   L+       N+  A K  E        H   Y ++ +  A V
Sbjct: 480 YQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALV 539

Query: 270 GRVEEALIRFRDML 283
           GRVE+A IR R ++
Sbjct: 540 GRVEDA-IRVRSLI 552


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  308 bits (789), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 178/512 (34%), Positives = 269/512 (52%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ +C   +    G Q+H   +
Sbjct: 59  WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118

Query: 316 KSGFEAYTSVSNAAITMY-------------------------------SSCGKIDEACM 344
           K G +    V  + I+MY                               +S G I+ A  
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  +  KD+VSWN MIS YA+    + A+  + +M    +RPDE T  +++   A SG 
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +N+++ NALI  Y+K   ++ A  +F  +  +++I+WNTLI G
Sbjct: 239 IELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG 298

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K    + 
Sbjct: 299 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVA 358

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VFN ++ K   SWNA+I  +A HG    +   F  M
Sbjct: 359 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRM 418

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +  G I+PD  TF  +LSACSH+G++D G  IF SM  DY   P  +H  CM+DLLG +G
Sbjct: 419 RKNG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG 477

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +IN+  ++     W +L  AC  HGN+ LG   A  L++ E + P  YVLLSN
Sbjct: 478 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSN 537

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E AN R LL   G+ K PGCS I
Sbjct: 538 IYATAGRWNEVANTRALLNDKGMKKVPGCSSI 569



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/517 (29%), Positives = 252/517 (48%), Gaps = 46/517 (8%)

Query: 124 YSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           Y+ +  +  C    H D   YA  VF+ + + +L ++N M  G   +      + L+  M
Sbjct: 23  YALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCM 82

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L +  ++Y+F  +L  C  +   + G+Q+H  V K G    + V  +LI+MY   G +
Sbjct: 83  ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRL 142

Query: 240 VDACKVFEEA------------KGY-----------------VCDHISYNVMMDGLASVG 270
            DA KVF+E+            KGY                 V D +S+N M+ G A  G
Sbjct: 143 EDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETG 202

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
             +EAL  F+DM+  ++RP E T V+V+SAC       +G QVH+     GF +   + N
Sbjct: 203 NYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVN 262

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I +YS CG+++ AC +F  L  KD++SWNT+I  Y   NL + A+L + EM   G  P
Sbjct: 263 ALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 322

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQ 442
           ++ T  S+L   A  G I++   IH ++   + G+     +  +LI  YAK   I+ A+Q
Sbjct: 323 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQ 382

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F+++  +++ +WN +I GF ++G        FS +  + + PD+ T    LS+C+    
Sbjct: 383 VFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 442

Query: 503 LRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
           L  G+ I   + ++  +  K+     MI L    G    +  + N M +E D + W +L+
Sbjct: 443 LDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 502

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            A   HG  +   S     Q++ +I+P+      +LS
Sbjct: 503 KACKMHGNVELGES---FAQNLIKIEPENPGSYVLLS 536



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 224/439 (51%), Gaps = 16/439 (3%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ Y+    L +CA  +    G Q+H + L+ G     +V  +++
Sbjct: 75  ALKLYVCM-ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLI 133

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L    +VF E  + DV S+T  +      G+++ A ++FD++P +D+  +NA
Sbjct: 134 SMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNA 193

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF++M K +VR D  +  +V+S C  +G +E GRQ+HS +   G
Sbjct: 194 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 253

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VNALI +Y  CG +  AC +FE       D IS+N ++ G   +   +EAL+ 
Sbjct: 254 FGSNLKIVNALIDLYSKCGELETACGLFEGLP--YKDVISWNTLIGGYTHMNLYKEALLL 311

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMY 333
           F++ML +   P+++T +S++ AC       +G  +H    K   G    +S+  + I MY
Sbjct: 312 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMY 371

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG I+ A  +F  +  K + SWN MI  +A      ++   +  M+  GI PD+ TF 
Sbjct: 372 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFV 431

Query: 394 SLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHN--M 447
            LL++     M+++  H F  +     +   ++    +I     +   K+A ++ +   M
Sbjct: 432 GLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 491

Query: 448 SPRNIITWNTLINGFLLNG 466
            P  +I W +L+    ++G
Sbjct: 492 EPDGVI-WCSLLKACKMHG 509



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 195/403 (48%), Gaps = 46/403 (11%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE---ACMIFARLQEKDIVSWNTMISTYAQ 366
           +HAQ +K+G        +  I         D    A  +F  +QE +++ WNTM   +A 
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
            +   SA+  Y+ M S+G+ P+ +TF  LL   A S   +  + IH  V   G   ++ V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 424 SNALISAYAKNERIKQAYQIFHNMSP--------------------------------RN 451
             +LIS Y +N R++ A+++F + SP                                ++
Sbjct: 129 HTSLISMYVQNGRLEDAHKVF-DESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKD 187

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +++WN +I+G+   G   + L+ F +++ + +RPDE T+   +S+CA+  S+  G+Q+H 
Sbjct: 188 VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHS 247

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           ++  +   S + + NA+I LY+KCG+L+ +  +F  +  KD ISWN LI  Y      KE
Sbjct: 248 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKE 307

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDYGFIPAEDHL 628
           A+  F+ M   G   P+  T  ++L AC+H G +D G  I    D  +   G   A    
Sbjct: 308 ALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK--GVANASSLR 364

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           + ++D+  + G ++ A +V NS  +     +W A+    A HG
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 406



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 40/279 (14%)

Query: 402 IEMVEMIHAFVFINGII-TNIQVSN----ALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           ++ + MIHA +   G+  TN  +S      ++S +   + +  A  +F  +   N++ WN
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHF--DGLPYAISVFETIQEPNLLIWN 60

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           T+  G  L+  PV  L+ +  ++   L P+ YT    L SCA+  + + G+QIHG+VLK 
Sbjct: 61  TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 120

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFN----------------------------MM 548
                + +  ++I++Y + G L+ + +VF+                            M 
Sbjct: 121 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180

Query: 549 IE---KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
            E   KD +SWNA+IS YA+ G  KEA+  FK M     ++PD++T   V+SAC+ +G +
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSI 239

Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           + G ++  S ++D+GF      ++ ++DL  + G L+ A
Sbjct: 240 ELGRQVH-SWIDDHGFGSNLKIVNALIDLYSKCGELETA 277


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 168/502 (33%), Positives = 270/502 (53%), Gaps = 39/502 (7%)

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
           S G   ++L  F  ML + L P    F SV+ +C   +   +G  +H   ++ G +    
Sbjct: 83  SHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLY 142

Query: 325 VSNAAITMYSS-------------CGKI-------------------DEACMIFARLQEK 352
             NA + MYS               G++                   D    IF  + EK
Sbjct: 143 TGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEK 202

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIH 409
           D+VSWNT+I+  A+  L    +    EM    ++PD FT  S   L+A +  I   + IH
Sbjct: 203 DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
                 G+  +I V+++LI  YAK  R+  + ++F  ++ R+ I+WN++I G + NG   
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD 322

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           +GL+ F ++LM++++P  Y+ S  + +CA +++L  GKQ+HGY+ +N     + + ++++
Sbjct: 323 EGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLV 382

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +YAKCG++  + ++F+ M  +D +SW A+I   A HG+  +A+  F+ M+  G IKP+ 
Sbjct: 383 DMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG-IKPNH 441

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
             F AVL+ACSH GLVD+  + F+SM  D+G  P  +H + + DLLGRAG L+EA   I 
Sbjct: 442 VAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFIC 501

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
             HI      W  L SAC  H N+ +   +A  +LE + +    Y+LL+NIY+AA  W+E
Sbjct: 502 GMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKE 561

Query: 710 AANIRELLKRTGVIKQPGCSWI 731
           AA  R  ++R G+ K P CSWI
Sbjct: 562 AAKWRASMRRIGIRKTPACSWI 583



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 22/424 (5%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD     + L +CA L +   G  LH Y +R GL    +  N ++++Y   R L    
Sbjct: 102 LYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESG 161

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHV---DYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           R    +   +V+   T  +   +   V   D   ++F+ MP++DL  +N +I G   NG 
Sbjct: 162 R--QRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGL 219

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNA 228
            +  + + REM   +++ D+++ +SVL +    + +  G+++H    + G    + V ++
Sbjct: 220 YEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASS 279

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           LI MY  C  V D+C+VF        D IS+N ++ G    G  +E L  FR ML+A ++
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTER--DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIK 337

Query: 289 PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P   +F S+M AC       +G Q+H    ++GF+    ++++ + MY+ CG I  A  I
Sbjct: 338 PKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQI 397

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           F R++ +D+VSW  MI   A       AI  + +M++ GI+P+   F ++L +     +V
Sbjct: 398 FDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLV 457

Query: 406 EMIHAFVFIN------GIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNT 457
           +   A+ + N      GI   ++   A+     +  R+++AY     M   P   I W T
Sbjct: 458 D--EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSI-WAT 514

Query: 458 LING 461
           L++ 
Sbjct: 515 LLSA 518



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAIT-MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           Q+HAQ +K  F+A +  + + +  +YS    + ++  +F  +     ++W ++I  Y   
Sbjct: 27  QLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSH 84

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVS 424
            L   ++ +++ M + G+ PD   F S+L S      + + E +H ++   G+  ++   
Sbjct: 85  GLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144

Query: 425 NALISAYAK---------------------NERIK-----------QAYQIFHNMSPRNI 452
           NAL++ Y+K                      ER +              +IF  M  +++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDL 204

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++WNT+I G   NG   + L+   E+  + L+PD +TLS  L   A    +  GK+IHG 
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
            ++  L + + + +++I +YAKC  +  S RVF ++ E+D ISWN++I+   Q+G   E 
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  F+ M  + +IKP   +F++++ AC+H   +  G ++   +  + GF       S ++
Sbjct: 325 LRFFRQML-MAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRN-GFDENIFIASSLV 382

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           D+  + G +  A+++ +   ++    +W A+   CA HG 
Sbjct: 383 DMYAKCGNIRTAKQIFDRMRLRDMV-SWTAMIMGCALHGQ 421



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 43/382 (11%)

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
           + ++I   T +G     +G F  M    +  D+  F SVL  C   + L  G  LH  + 
Sbjct: 74  WKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYII 133

Query: 216 KSGFSCLVSVVNALITMY-------------FNCGNVVDAC------------------- 243
           + G    +   NAL+ MY                G V D                     
Sbjct: 134 RVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVR 193

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC 303
           K+FE       D +S+N ++ G A  G  EE L   R+M  A+L+P   T  SV+   + 
Sbjct: 194 KIFEMMPEK--DLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVL-PLIA 250

Query: 304 PRV----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
             V    G ++H  +++ G +A   V+++ I MY+ C ++ ++C +F  L E+D +SWN+
Sbjct: 251 ENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNS 310

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFING 416
           +I+   Q  L    +  + +M    I+P  ++F S++ +   +  + +   +H ++  NG
Sbjct: 311 IIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 370

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
              NI ++++L+  YAK   I+ A QIF  M  R++++W  +I G  L+G     ++ F 
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430

Query: 477 ELLMSELRPDEYTLSVALSSCA 498
           ++    ++P+       L++C+
Sbjct: 431 QMETEGIKPNHVAFMAVLTACS 452



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 143/282 (50%), Gaps = 35/282 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  +R+G Y++ L +  ++  ++ LKPD ++LS+ L   A   + + G ++H
Sbjct: 204 LVSWNTIIAGNARNGLYEETLRMIREMGGAN-LKPDSFTLSSVLPLIAENVDISRGKEIH 262

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             ++R GL A  +VA++++ +Y     +    RVF+ +   D  SW + ++ C       
Sbjct: 263 GCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGC------- 315

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                                    +NG  D G+  FR+M    ++  +YSF+S++  C 
Sbjct: 316 ------------------------VQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACA 351

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
               L  G+QLH  +T++GF   + + ++L+ MY  CGN+  A ++F+  +  + D +S+
Sbjct: 352 HLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR--LRDMVSW 409

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             M+ G A  G+  +A+  F  M    ++P+ + F++V++AC
Sbjct: 410 TAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTAC 451



 Score = 82.4 bits (202), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 153/375 (40%), Gaps = 77/375 (20%)

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y+    +  + ++F+ +     + W ++I  +  +G P Q L  F  +L S L PD    
Sbjct: 50  YSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVF 109

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR------- 543
              L SCA +  L  G+ +HGY+++  L   +  GNA++ +Y+K   L+ S R       
Sbjct: 110 PSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGE 169

Query: 544 -------------------------VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                                    +F MM EKD +SWN +I+  A++G  +E +   + 
Sbjct: 170 VFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIRE 229

Query: 579 MQDVGRIKPDQATFTAVLS---------------ACSHAGLVDDGTRIFDSMVNDYG--- 620
           M     +KPD  T ++VL                 CS    +D    +  S+++ Y    
Sbjct: 230 MGGAN-LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCT 288

Query: 621 ----------FIPAEDHLSCMLDLLG--RAGYLDEAERVINSQ---HIQARSDNWWALFS 665
                      +   D +S    + G  + G  DE  R         I+ +S ++ ++  
Sbjct: 289 RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMP 348

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVL--LSNIYAAAGLWEEAANI------RELL 717
           ACA    L LG+ + G +     D+ ++++   L ++YA  G    A  I      R+++
Sbjct: 349 ACAHLTTLHLGKQLHGYITRNGFDE-NIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMV 407

Query: 718 KRTGVIKQPGCSWIG 732
             T +I   GC+  G
Sbjct: 408 SWTAMIM--GCALHG 420



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 5/162 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A   ++G + + L  F Q+  + K+KP  YS S+ + ACA+L     G QLH Y  
Sbjct: 309 NSIIAGCVQNGLFDEGLRFFRQMLMA-KIKPKSYSFSSIMPACAHLTTLHLGKQLHGYIT 367

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G      +A++++ +Y    ++ + K++F  ++  D+ SWT  +  C   G    A E
Sbjct: 368 RNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIE 427

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK 182
           +F++M    +      + A++T C+  G  D     F  M +
Sbjct: 428 LFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTR 469


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 192/702 (27%), Positives = 348/702 (49%), Gaps = 39/702 (5%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G ++ A  +F ++     L P++ ++ + L  C+N      G  +H   ++ GL     V
Sbjct: 323 GAWEKAFGVF-RLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSV 381

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            + ++S+Y                               +K+G +D A  +F  + ++  
Sbjct: 382 VSALVSMY-------------------------------SKLGDLDSAVFLFSSVTEKSQ 410

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSL 213
            ++N++I+G   N   ++ +G  R M    V  D  +  SV+S C     L  G+ +H+ 
Sbjct: 411 LLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAY 470

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
             +S      SV+NAL+ MY +CG +   CK+F   +  V   IS+N ++ G A  G   
Sbjct: 471 AVRSRLELNESVMNALLAMYADCGQLSICCKLFHTME--VRTLISWNTIISGFAENGDSV 528

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAI 330
             L  F  M +A ++   +T ++++S+        VG  VH+ A++SG     SV+NA I
Sbjct: 529 ACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALI 588

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           TMY++CG I     +F  L   + +S+N +++ Y + NL    +  +  M     +P+  
Sbjct: 589 TMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNII 648

Query: 391 TFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
           T  +LL         + +H++   N       +  + I  Y++   ++  + +F  +  R
Sbjct: 649 TLLNLLPICHSQLQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGER 708

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N I WN +++  +          +F ++    ++ D  T+   +S+C+++      + + 
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVT 768

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
              L+      + + NA+I ++++CG +  + ++F++ +EKD++SW+ +I+AY+ HG+G 
Sbjct: 769 AIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGDGG 828

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
            A+  F  M   G IKPD  TF +VLSACS +G ++ G  +F SM+ D+G  P  +H +C
Sbjct: 829 SALDLFLMMVSSG-IKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYAC 887

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           M+DLLGR G+LDEA  ++ +   +       +L  AC  HGN +LG  +  +L E +   
Sbjct: 888 MVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHGN 947

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
           P  YV+LSNIYA+AG W +   +R  ++  G+IK  G S IG
Sbjct: 948 PRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVSLIG 989



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 274/583 (46%), Gaps = 44/583 (7%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           LNI++   S  G +++ L L+ ++ +      D ++    + ACA +     G ++H   
Sbjct: 112 LNIAVRCFSDHGFHRELLGLYREVCA---FGSDNFTFPPVIRACAAVSCLRLGKEVHCRV 168

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +R G      V   +L +Y  +  +   +RVF  +++ D+ SW                 
Sbjct: 169 VRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWN---------------- 212

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAG 202
                          AMI+G + NG         ++M +   R +  S   ++S V   G
Sbjct: 213 ---------------AMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLG 257

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
           + + G  LH+   KSG     S+  A I+MY   G++  +  +F ++   V + +S N M
Sbjct: 258 VRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQS--LVDNLVSCNSM 315

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           +      G  E+A   FR M    L P+ +T VS++  C        G  VH   +K G 
Sbjct: 316 ISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGL 375

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               SV +A ++MYS  G +D A  +F+ + EK  + WN++IS Y   N     + +   
Sbjct: 376 AEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRR 435

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNER 436
           MQ  G+ PD  T  S+++     E + +   IHA+   + +  N  V NAL++ YA   +
Sbjct: 436 MQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQ 495

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +    ++FH M  R +I+WNT+I+GF  NG  V  L+ F ++ +++++ D  TL   +SS
Sbjct: 496 LSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISS 555

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + I  +  G+ +H   +++     +S+ NA+IT+Y  CG +    ++F+ +   +TIS+
Sbjct: 556 LSAIEDITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISY 615

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           NAL++ Y ++   +E +  F  M    + KP+  T   +L  C
Sbjct: 616 NALMTGYRKNNLFEEILPLFYHMIKNDQ-KPNIITLLNLLPIC 657



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 189/384 (49%), Gaps = 9/384 (2%)

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           SVV   +  Y   G    A  VF        +    N+ +   +  G   E L  +R+  
Sbjct: 77  SVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYRE-- 134

Query: 284 VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           V +      TF  V+ AC    C R+G +VH + +++G      V  A + MY+  G++D
Sbjct: 135 VCAFGSDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVD 194

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG---SLLA 397
            +  +F  ++ +D++SWN MIS Y+       A  A  +MQ  G RP+  +     S+++
Sbjct: 195 LSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVS 254

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
             G  +  + +HAF   +G++ +  ++ A IS YA    +  +  +FH     N+++ N+
Sbjct: 255 GLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNS 314

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I+  + +G   +    F  +    L P+  T+   L  C+    + HG+ +HG V+K  
Sbjct: 315 MISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFG 374

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           L  ++S+ +A++++Y+K GDLD ++ +F+ + EK  + WN+LIS Y  + +    +   +
Sbjct: 375 LAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVR 434

Query: 578 AMQDVGRIKPDQATFTAVLSACSH 601
            MQ  G + PD  T  +V+S C H
Sbjct: 435 RMQIEG-VDPDALTVISVISKCRH 457



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 170/359 (47%), Gaps = 12/359 (3%)

Query: 309 QVHAQ-AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL--QEKDIVSWNTMISTYA 365
           ++HA+ A+        SV   A+  Y   GK   A  +FA       ++   N  +  ++
Sbjct: 61  KLHARLAVTGALREDASVVAGAVERYLFFGKPASAAAVFAGFYRGRAEVYDLNIAVRCFS 120

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
                R  +  Y E+ + G   D FTF  ++ +   +  + +   +H  V   G   N+ 
Sbjct: 121 DHGFHRELLGLYREVCAFG--SDNFTFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVG 178

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V  AL+  YAK+ ++  + ++F  M  R++I+WN +I+G+ LNG  ++  +   ++    
Sbjct: 179 VQTALLDMYAKSGQVDLSRRVFDGMKSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDG 238

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
            RP+  +L   +S  + +     G  +H + LK+ ++   SL  A I++YA  G L  SL
Sbjct: 239 FRPNASSLVGIVSMVSGLGVRDAGDPLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSL 298

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            +F+  +  + +S N++IS   QHG  ++A   F+ M+  G + P+  T  ++L  CS+ 
Sbjct: 299 SLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLV-PNLVTVVSILPCCSNF 357

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
             ++ G  +   MV  +G       +S ++ +  + G LD A  + +S  +  +S   W
Sbjct: 358 FGINHGESV-HGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSS--VTEKSQLLW 413


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  308 bits (788), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 182/519 (35%), Positives = 292/519 (56%), Gaps = 49/519 (9%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASL-RPSELTFVSVMSAC-----LCPRVGYQVHA 312
           +N M+ G +      EA++ +  M+   +  P+  TF  ++++C     L P  G++VH+
Sbjct: 78  WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP--GHEVHS 135

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K GFE+   V NA I +YS  G ++ A  +F     +D+VS+NTMI  YA+ N   S
Sbjct: 136 HIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES 195

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFIN--GIITNIQVSNAL 427
           A+  + EMQ+ GI PDEFTF +L +    +    + + IHA V+ N   I +NI + +A+
Sbjct: 196 ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAI 255

Query: 428 ISAYAK------NER--------------------------IKQAYQIFHNMSPRNIITW 455
           +  YAK       ER                          I  A ++F++M  R++I+W
Sbjct: 256 VDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISW 315

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             +I+G+   G   + L+ F E+    ++PDE TL   LS+CAR+ +   GK+++   ++
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIE 375

Query: 516 NNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEA 572
           N + ++ + L  A++ +YAKCG +D +L +F  + +  K    +N++I+  AQHG G+ A
Sbjct: 376 NGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETA 435

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           ++ F+ +   G +KPD+ TF  VL AC H+GL+++G ++F+SM N YG  P  +H  CM+
Sbjct: 436 ITVFRELISTG-LKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMV 494

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLGR G L+EA  ++     +A S  W AL SAC  HGN+++G I    LLE E    +
Sbjct: 495 DLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGA 554

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            YVLLSNI A A  WEEA  +R++++  G+ K PG S+I
Sbjct: 555 RYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYI 593



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 124/490 (25%), Positives = 224/490 (45%), Gaps = 75/490 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   N  +   SRS + ++A+ L++ + +     P+ ++    L +CA L +   G+++H
Sbjct: 75  LFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVH 134

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++ ++ G ++   V N ++ LY           VF                     G+++
Sbjct: 135 SHIIKHGFESDLFVRNALIHLYS----------VF---------------------GNLN 163

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +FD+   RDL  YN MI G  E    +  + LF EM    +  D ++F ++ SVC 
Sbjct: 164 LARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCS 223

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEA-------- 249
                  G+Q+H+ V K+  S   +++  +A++ MY  CG +  A +VF           
Sbjct: 224 VLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAA 283

Query: 250 -KGYVC---------------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
               VC                     D IS+  M+ G +  G+  EAL  F++M    +
Sbjct: 284 WSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGI 343

Query: 288 RPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEAC 343
           +P E+T V+V+SAC       +G +++ Q +++G F   T ++ A + MY+ CG ID A 
Sbjct: 344 KPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSAL 403

Query: 344 MIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
            IF R+ +  K    +N+MI+  AQ  LG +AI  + E+ S G++PDE TF  +L + G 
Sbjct: 404 EIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGH 463

Query: 402 IEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWN 456
             ++E    +  +     GI   ++    ++    +   +++AY +   M    N + W 
Sbjct: 464 SGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWR 523

Query: 457 TLINGFLLNG 466
            L++    +G
Sbjct: 524 ALLSACRTHG 533



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 188/403 (46%), Gaps = 38/403 (9%)

Query: 9   TIAGNSNTSKEL--------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSL 60
           ++ GN N ++ L        L+  N  +   +     + AL LF ++ +S  L PD ++ 
Sbjct: 157 SVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGIL-PDEFTF 215

Query: 61  STTLAACANLRNAAFGNQLHA--YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
               + C+ L     G Q+HA  Y     + +   + + I+ +Y     +   +RVFS +
Sbjct: 216 VALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTM 275

Query: 119 -QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
             +    +W++ +    + G ++ A ++F+ M +RD+  + AMI+G ++ G     + LF
Sbjct: 276 GTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELF 335

Query: 178 REMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFN 235
           +EM  L ++ D  +  +VLS C   G  + G++L H  +    F+    +  A++ MY  
Sbjct: 336 KEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAK 395

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
           CG++  A ++F      +     +N M+ GLA  G  E A+  FR+++   L+P E+TFV
Sbjct: 396 CGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFV 455

Query: 296 SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AITMYSSCGKIDEAC 343
            V+ AC         H+  ++ G + + S+ NA             + +    G ++EA 
Sbjct: 456 GVLCAC--------GHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAY 507

Query: 344 MIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQS 382
            +  ++  E + V W  ++S   T+    +G  A    LEM++
Sbjct: 508 DLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEA 550


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 184/520 (35%), Positives = 281/520 (54%), Gaps = 29/520 (5%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           N  +T  FN    VD   VF           S+N ++  LA  G   EAL  F  M   S
Sbjct: 101 NPNLTTLFN--KYVDKTNVF-----------SWNSVIAELARSGDSVEALRAFSSMRKLS 147

Query: 287 LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           L+P+  TF   + +C   L    G Q H QA+  GFE    VS+A + MYS CG++ +A 
Sbjct: 148 LKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDAR 207

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVG------IRPDEFTFGSL 395
            +F  +  ++IVSW +MI+ Y Q +    A+L + E  ++  G      +  D     S+
Sbjct: 208 TLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSV 267

Query: 396 LASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           L++   +    + E +H F+   G   ++ V N L+ AYAK   +  + ++F  M+ R++
Sbjct: 268 LSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDV 327

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           I+WN++I  +  NG   + ++ F  ++   E+  +  TLS  L +CA   S R GK IH 
Sbjct: 328 ISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHD 387

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
            V+K  L S + +G ++I +Y KCG ++ + + F+ M EK+  SW+A+++ Y  HG  KE
Sbjct: 388 QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKE 447

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
           A+  F  M   G +KP+  TF +VL+ACSHAGL+++G   F +M +++   P  +H  CM
Sbjct: 448 ALEVFYEMNMAG-VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCM 506

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
           +DLLGRAGYL EA  +I    ++     W AL  AC  H N+ LG I A  L E +    
Sbjct: 507 VDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNC 566

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             YVLLSNIYA AG WE+   +R L+K +G++K PG S +
Sbjct: 567 GYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 606



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 211/477 (44%), Gaps = 48/477 (10%)

Query: 1   MLQRRIT----ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPD 56
           +L+RR +     T   N    K  +   N  +A L+RSG   +AL  F  +     LKP+
Sbjct: 93  VLRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKL-SLKPN 151

Query: 57  IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFS 116
             +    + +C+ L +   G Q H  AL  G +    V++ ++ +Y    +L   + +F 
Sbjct: 152 RSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD 211

Query: 117 EIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL 176
           EI + ++ SWT+ ++     G+V       +    R L ++   +    E+G E  G   
Sbjct: 212 EISHRNIVSWTSMIT-----GYVQ------NDDAHRALLLFKEFLV--EESGSEGDG--- 255

Query: 177 FREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
                  +V  D  +  SVLS C           +H  + K GF   + V N L+  Y  
Sbjct: 256 -------EVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAK 308

Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTF 294
           CG +  + +VF+       D IS+N ++   A  G   E++  F  M+    +  + +T 
Sbjct: 309 CGELGVSRRVFDGMAER--DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTL 366

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
            +V+ AC      R+G  +H Q +K G E+   V  + I MY  CGK++ A   F R++E
Sbjct: 367 SAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 426

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----- 406
           K++ SW+ M++ Y      + A+  + EM   G++P+  TF S+LA+     ++E     
Sbjct: 427 KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHW 486

Query: 407 ---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLI 459
              M H F     +   ++    ++    +   +K+A+ +   M  R + + W  L+
Sbjct: 487 FKAMSHEF----DVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 190/563 (33%), Positives = 294/563 (52%), Gaps = 26/563 (4%)

Query: 188 DNYSFA----SVLSVCDAGLLEFG-------RQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           D++SFA    S+ S C  G +          R LH+L   SGF+    V +AL  +YF  
Sbjct: 112 DSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYFTL 171

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFV 295
               DA KVF+       D + +N ++ GL+      EAL  F  M  A S+RP   T  
Sbjct: 172 SRGNDARKVFDAVPS--PDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLA 225

Query: 296 SVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
           SV+ A        +G  VHA   K G   +  V    I++Y+ CG ++ A  +F R++  
Sbjct: 226 SVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGP 285

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIH 409
           D+V++N +IS Y+   +  S++  + E+  +G+RP   T  +L+   +  G   +   +H
Sbjct: 286 DLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLH 345

Query: 410 AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           A V   G+  N  VS AL + Y +   +  A + F  M  + + +WN +I+G+  NG   
Sbjct: 346 AHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTE 405

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             +  F ++    +RP+  T+S ALS+CA++ +L  GK +H  +    L   + +  A+I
Sbjct: 406 MAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALI 465

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
            +Y KCG +  +  +F+ M  K+ +SWN +IS Y  HG+G EA+  +K M D   + P  
Sbjct: 466 DMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMD-AHLHPTS 524

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           +TF +VL ACSH GLV +GT +F SM +DYG  P  +H +CM+DLLGRAG L EA  +I+
Sbjct: 525 STFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELIS 584

Query: 650 SQHIQARSDN-WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
                A     W AL  AC  H +  L ++ +  L E E +    YVLLSN+Y +   + 
Sbjct: 585 EFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYS 644

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           EAA +R+  K   ++K PGC+ I
Sbjct: 645 EAAVVRQEAKSRKLVKTPGCTLI 667



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 202/456 (44%), Gaps = 57/456 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA LS S    +AL  FV++  +  ++PD  +L++ L A A + N   G  +HA+  
Sbjct: 193 NTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGE 248

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL  + HV   ++SLY                                K G ++ A  
Sbjct: 249 KCGLAQHEHVVTGLISLY-------------------------------AKCGDMECARH 277

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +FD+M   DL  YNA+I+G + NG     + LF+E+  + +R  + +  +++ V      
Sbjct: 278 LFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHS---- 333

Query: 205 EFGRQ-----LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            FG +     LH+ V K+G      V  AL T+Y    ++  A + F+       +  S+
Sbjct: 334 PFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTME--SW 391

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK 316
           N M+ G A  G  E A+  F+ M   ++RP+ LT  S +SAC       +G  VH     
Sbjct: 392 NAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIAN 451

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
              E    V  A I MY  CG I EA  IF  +  K++VSWN MIS Y     G  A+  
Sbjct: 452 EKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKL 511

Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
           Y +M    + P   TF S+L   +  G + E   +  +     GI   I+    ++    
Sbjct: 512 YKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLG 571

Query: 433 KNERIKQAYQIFHNMSPRNII---TWNTLINGFLLN 465
           +  ++K+A+++     P++ +    W  L+   +++
Sbjct: 572 RAGQLKEAFELISEF-PKSAVGPGIWGALLGACMVH 606



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 43/308 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G    ++ LF ++     L+P   +L   +   +   +      LH
Sbjct: 287 LVTYNALISGYSINGMVGSSVELFKEL-VGMGLRPSSSTLVALIPVHSPFGHEPLAGCLH 345

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ ++AGL A   V+  + +LY    D+ S +R F                         
Sbjct: 346 AHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF------------------------- 380

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                 D MP++ +  +NAMI+G  +NG  ++ + LF++M  L+VR +  + +S LS C 
Sbjct: 381 ------DAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L  G+ +H ++        V V+ ALI MY  CG++ +A  +F+       + +S+
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNK--NVVSW 492

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           NVM+ G    G+  EAL  ++DM+ A L P+  TF+SV+ AC         H   +K G 
Sbjct: 493 NVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYAC--------SHGGLVKEGT 544

Query: 320 EAYTSVSN 327
             + S+++
Sbjct: 545 TVFRSMTS 552


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 195/654 (29%), Positives = 336/654 (51%), Gaps = 47/654 (7%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++     +SA  K+G V  A +VF  +   ++  Y A+I+G +++ +ED  + LF  M 
Sbjct: 129 DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML 188

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              +  + Y+F ++L+ C   +  + G Q+H +V K G    V + NAL+ +Y  CG + 
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS 299
              ++FEE      D  S+N ++  L    + +EA   FR M L   L+    +  ++++
Sbjct: 249 LVLRLFEEMPER--DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLT 306

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC   + P  G Q+HA A+K G E++ SVS++ I  Y+ CG  ++   +F  +  +D+++
Sbjct: 307 ACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366

Query: 357 WNTMISTY----------------AQRNL---------------GRSAILAYLEMQSVGI 385
           W  MI++Y                 +RN                G  A+  ++EM   G+
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426

Query: 386 RPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
              + T  S++ + G ++   + + I  FV   GI++N  +  AL+  Y +  R++ A +
Sbjct: 427 EISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEK 486

Query: 443 IFHNMSPRNIIT--WNTLINGFLLNGFPVQGLQHF-SELLMSELRPDEYTLSVALSSCAR 499
           IF+  S  N  T    ++I G+  NG   + +  F S      +  DE   +  LS C  
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           I     GKQ+H + LK+ LI++  +GNA +++Y+KC ++D ++RVFN M  +D +SWN L
Sbjct: 547 IGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA--GLVDDGTRIFDSMVN 617
           ++ +  H +G +A+  +K M+  G IKPD  TF  ++SA  H    LVD    +F SM  
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAG-IKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           ++   P  +H +  + +LGR G L+EAE+ I +  ++     W AL ++C  + N RL +
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  +L  E   P  Y+L SN+Y+A+G W  +  +RE ++  G  K P  SWI
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWI 779



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 22/458 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++L +   Y +A   F  +     LK D +SLST L ACA       G QLHA AL
Sbjct: 266 NTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALAL 325

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+++  V+++++  Y        V  +F  +   DV +WT  +++  + G +D A E
Sbjct: 326 KVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVE 385

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF+KMP R+   YNA++ G + N      + LF EM +  V   + +  S+++ C  GLL
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITAC--GLL 443

Query: 205 ---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YN 260
              +  +Q+   V K G      +  AL+ MY  CG + DA K+F + +    D+ +   
Sbjct: 444 KSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQ-RSLENDYTAMLT 502

Query: 261 VMMDGLASVGRVEEALIRFRD-MLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQA 314
            M+ G A  G++ EA+  F       ++   E+   S++S  LC  +G+     Q+H  A
Sbjct: 503 SMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILS--LCGSIGFHEMGKQMHCHA 560

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +KSG    T V NA ++MYS C  +D+A  +F  +  +DIVSWN +++ +     G  A+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEMIHA-FVFI---NGIITNIQVSNALI 428
             + +M+  GI+PD  TF  ++++    E  +V+   + FV +   + I   ++   + I
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLN 465
           S   +   +++A Q   NM    ++  W  L+N   +N
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRIN 718



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 259/581 (44%), Gaps = 80/581 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S+S    +A+ LF  +  S  ++P+ Y+    L AC    +   G+Q+H   ++ G
Sbjct: 168 ISGFSKSDWEDEAVELFFAMLDS-GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLG 226

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L +   + N ++ LY     L  V R+F E+   D+ SW T +S+  K    D   E FD
Sbjct: 227 LLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD---EAFD 283

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF 206
                                        FR M     ++ D++S +++L+ C   +   
Sbjct: 284 ----------------------------YFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315

Query: 207 -GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK--------GYVCDH- 256
            G+QLH+L  K G    +SV ++LI  Y  CG+  D   +FE           G +  + 
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375

Query: 257 --------------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
                               ISYN ++ GL+       AL  F +ML   +  S+ T  S
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435

Query: 297 VMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEK 352
           +++AC      +V  Q+    MK G  + + +  A + MY+ CG++++A  IF  R  E 
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495

Query: 353 DIVSWNT-MISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLA---SSGFIEMVEM 407
           D  +  T MI  YA+      AI  +   QS G I  DE    S+L+   S GF EM + 
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQ 555

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H     +G+IT   V NA +S Y+K   +  A ++F+ M+ ++I++WN L+ G +L+  
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCAR-----ISSLRHGKQIHGYVLKNNLISKM 522
             + L  + ++  + ++PD  T ++ +S+        + S R          ++N+   +
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCR--SLFVSMETEHNIKPTL 673

Query: 523 SLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISA 562
               + I++  + G L +    + NM +E D   W AL+++
Sbjct: 674 EHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 168/377 (44%), Gaps = 73/377 (19%)

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGR-------------------------------SAI 374
           F +L+E DI   N +IS Y +  L R                                A+
Sbjct: 123 FLKLEE-DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAV 181

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             +  M   GI P+E+TF ++L +   +   ++   +H  V   G+++ + + NAL+  Y
Sbjct: 182 ELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLY 241

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL 490
            K   +    ++F  M  R+I +WNT+I+  +      +   +F  + L   L+ D ++L
Sbjct: 242 CKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSL 301

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD------------- 537
           S  L++CA       G+Q+H   LK  L S +S+ +++I  Y KCG              
Sbjct: 302 STLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPI 361

Query: 538 ------------------LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
                             LD ++ VFN M +++ IS+NA+++  +++ +G  A+  F  M
Sbjct: 362 RDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEM 421

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDG--TRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            + G ++    T T++++AC   GL+     ++     V  +G +      + ++D+  R
Sbjct: 422 LEEG-VEISDCTLTSIITAC---GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTR 477

Query: 638 AGYLDEAERVINSQHIQ 654
            G +++AE++   + ++
Sbjct: 478 CGRMEDAEKIFYQRSLE 494


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/585 (31%), Positives = 301/585 (51%), Gaps = 46/585 (7%)

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +  +S+LS C D   L  GRQLH  +   GF     +V  L+T Y     +VDA  + E 
Sbjct: 175 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 234

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPR 305
           +   +     +N+++      G  ++AL  ++ M+   +RP   T+ SV+ AC   L   
Sbjct: 235 SN--ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 292

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G +VH     S  +    V NA I+MY  CGK+  A  +F ++ E+D VSWN+MIS YA
Sbjct: 293 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 352

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTF--------------------------GSLLASS 399
              +   A   +  M +  I  +   +                          GS L S 
Sbjct: 353 SMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSV 412

Query: 400 GFI------------EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
             I            ++ + IH+F   +       V N+LI+ Y++ + +K AY +F  M
Sbjct: 413 ALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLM 472

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             +++I+WN++I+G        +      E+L+S + P+  T++  L  CAR+++L+HGK
Sbjct: 473 EAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGK 532

Query: 508 QIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + H Y+ +  +    + L NA++ +YA+ G +  + RVF+M+ E+D +++ ++I+ Y   
Sbjct: 533 EFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 592

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           GEG+ A+  F+ M +  +IKPD  T  AVLSACSH+GLV  G  +F+ M + YG  P  +
Sbjct: 593 GEGQAALKLFEEMNNF-QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLE 651

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +CM DL GRAG L++A+ +I +   +     W  L  AC  H N  +G   A  LLE 
Sbjct: 652 HFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEM 711

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + P  YVL++N+YAAAG W + A +R  ++  GV K PGC+W+
Sbjct: 712 KPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWV 756



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 218/453 (48%), Gaps = 25/453 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +++  R+G  Q AL  + Q+     ++PD ++  + L AC    +  FG ++H    
Sbjct: 244 NLLISSYVRNGFCQKALSAYKQM-VKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 302

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            + +K    V N ++S+Y     +   + +F +I   D  SW + +S    MG  + A E
Sbjct: 303 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 362

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           +F  M   D+     ++N +  G    G     + L  +M K     D+ +    L  C 
Sbjct: 363 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACS 422

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHI 257
             G  + G+++HS   +S F  + +V N+LITMY  C ++  A  +F+  EAK      I
Sbjct: 423 HIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSL----I 478

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM-- 315
           S+N ++ G   + R EEA    R+ML++ + P+ +T  SV+   LC RV    H +    
Sbjct: 479 SWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLP--LCARVANLQHGKEFHC 536

Query: 316 ----KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               +  F+ +  + NA + MY+  GK+ EA  +F  L E+D +++ +MI+ Y  +  G+
Sbjct: 537 YMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQ 596

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMI-HAFVFINGIITNIQVSNAL 427
           +A+  + EM +  I+PD  T  ++L++   SG +   +++      + G+  +++    +
Sbjct: 597 AALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACM 656

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIIT-WNTLI 459
              + +   + +A +I  NM  +     W TLI
Sbjct: 657 TDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 689



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 141/588 (23%), Positives = 265/588 (45%), Gaps = 81/588 (13%)

Query: 27  SLANLSRSGHYQDALHL--FVQIHSSHKLKPDI-YSLSTTLAACANLRNAAFGNQLHAYA 83
           SL   +  G+  DA      +++H+S   +  I + +S+ L++C ++++ A G QLH + 
Sbjct: 141 SLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHI 200

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  G + +P +   +++ Y +A +L+    V +E  N                       
Sbjct: 201 ISLGFEQHPILVPKLVTFY-SAFNLLVDAHVITENSN----------------------- 236

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
            +    P      +N +I+    NG+    +  +++M K  +R DN+++ SVL  C   L
Sbjct: 237 -ILHPFP------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEEL 289

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L FG+++H  +  S     + V NALI+MY  CG V  A  +F++      D +S+N M
Sbjct: 290 DLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER--DAVSWNSM 347

Query: 263 MDGLASVGRVEEALIRFRDM------------------------------LVASLRP--S 290
           +   AS+G   EA   F  M                              L++ +R   S
Sbjct: 348 ISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGS 407

Query: 291 ELTFVSV---MSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            L  V++   + AC      ++G ++H+ A++S F    +V N+ ITMYS C  +  A +
Sbjct: 408 HLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYL 467

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  ++ K ++SWN++IS     +    A     EM   GI P+  T  S+L   A    
Sbjct: 468 LFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVAN 527

Query: 402 IEMVEMIHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           ++  +  H ++        ++ + NAL+  YA++ ++ +A ++F  +  R+ +T+ ++I 
Sbjct: 528 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIA 587

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLI 519
           G+ + G     L+ F E+   +++PD  T+   LS+C+    +  G+ +   +     L 
Sbjct: 588 GYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLT 647

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQH 566
             +     M  L+ + G L+ +  +   M  K T + W  LI A   H
Sbjct: 648 PHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 695


>gi|242039301|ref|XP_002467045.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
 gi|241920899|gb|EER94043.1| hypothetical protein SORBIDRAFT_01g018760 [Sorghum bicolor]
          Length = 564

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 180/537 (33%), Positives = 293/537 (54%), Gaps = 12/537 (2%)

Query: 202 GLLEFGRQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           G +  GR LH+ +  +G +   + + N LITMY  C +   A +VF        + +S+ 
Sbjct: 31  GDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLP--RPNPVSWT 88

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS 317
            ++ GL       +AL  F  M  A + P++    S   A         G Q+H    + 
Sbjct: 89  TLVSGLVQNSMHHDALAAFAAMRRAHVAPTQFALSSAARAAAALSAPRPGTQLHCIGTRF 148

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           GF+    V++    MYS CG +DEAC +F ++  +D V+W TMI  YA+    ++AILA+
Sbjct: 149 GFDTELFVASNLADMYSKCGLLDEACRVFDQMPHRDAVTWTTMIDGYAKNGSLKAAILAF 208

Query: 378 LEMQSVG-IRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAK 433
            +M+  G +  D+  F S L++SG ++       +H  +   G      V NAL+  YAK
Sbjct: 209 RDMKCEGLVGADQHVFCSALSASGGLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAK 268

Query: 434 NERIKQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           +  ++ A ++   +    N+++  +LI+G++      + L+ ++EL    + P+E+T + 
Sbjct: 269 SGDLESASRVVKIDPGGWNVVSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFTFAS 328

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            +  CA    L  G Q+H  V+K +LIS   +G+ ++ +Y KCG +  SL++FN +    
Sbjct: 329 MIKGCAMQDLLEQGAQLHAQVIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHS 388

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            ++WNA+I+ YAQHG G  A+  F  M   G I+P+  TF  +L+ACSHAGLVD+G   F
Sbjct: 389 EVAWNAVINVYAQHGHGWGAIQAFDRMTASG-IRPNHITFVCLLTACSHAGLVDEGLEYF 447

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            SM + +G  P E+H SC++D+ GRAG LDEAE+ I+   ++  +  W +L  AC   GN
Sbjct: 448 YSMKDAHGIEPKEEHYSCIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGN 507

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
             LG I A  L++ + D   ++V LS IYA+ G WE+A ++R+L+K + +   PG S
Sbjct: 508 KELGEIAAQNLMKLDPDNTGIHVSLSGIYASLGQWEDAKSVRKLMKDSSIKNLPGFS 564



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/480 (28%), Positives = 221/480 (46%), Gaps = 49/480 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ L ++  + DAL  F  +  +H + P  ++LS+   A A L     G QLH    R G
Sbjct: 91  VSGLVQNSMHHDALAAFAAMRRAH-VAPTQFALSSAARAAAALSAPRPGTQLHCIGTRFG 149

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VA+ +  +Y                               +K G +D AC VFD
Sbjct: 150 FDTELFVASNLADMY-------------------------------SKCGLLDEACRVFD 178

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVCDAGLLE- 205
           +MP RD   +  MI G  +NG     I  FR+M  +  V  D + F S LS    GL + 
Sbjct: 179 QMPHRDAVTWTTMIDGYAKNGSLKAAILAFRDMKCEGLVGADQHVFCSALSA-SGGLKDG 237

Query: 206 -FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-EAKGYVCDHISYNVMM 263
            FGR LH  + K+GF     V NAL+ MY   G++  A +V + +  G+  + +S   ++
Sbjct: 238 WFGRSLHCCIIKAGFELETVVRNALLDMYAKSGDLESASRVVKIDPGGW--NVVSGTSLI 295

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
           DG   V R+EEAL  + ++    + P+E TF S++  C    +   G Q+HAQ +K+   
Sbjct: 296 DGYIEVDRIEEALETYTELGRQGVEPNEFTFASMIKGCAMQDLLEQGAQLHAQVIKTSLI 355

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           + + V +  + MY  CG I  +  +F  +     V+WN +I+ YAQ   G  AI A+  M
Sbjct: 356 SDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHSEVAWNAVINVYAQHGHGWGAIQAFDRM 415

Query: 381 QSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
            + GIRP+  TF  LL +   +G + E +E  ++    +GI    +  + +I  Y +  R
Sbjct: 416 TASGIRPNHITFVCLLTACSHAGLVDEGLEYFYSMKDAHGIEPKEEHYSCIIDMYGRAGR 475

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           + +A +    M  + N   W +L+    + G    G      L+  +L PD   + V+LS
Sbjct: 476 LDEAEKFISEMPVKPNAYGWCSLLGACRMRGNKELGEIAAQNLM--KLDPDNTGIHVSLS 533



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 138/555 (24%), Positives = 240/555 (43%), Gaps = 68/555 (12%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVY 124
           +C    +   G  LHA  L  G  A    +AN ++++Y    D  S  RVF  +  P+  
Sbjct: 26  SCGRTGDIRRGRALHARLLLTGAAATSTFLANHLITMYSYCADAASAVRVFGVLPRPNPV 85

Query: 125 SWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD 184
           SWTT                               +++G  +N      +  F  M +  
Sbjct: 86  SWTT-------------------------------LVSGLVQNSMHHDALAAFAAMRRAH 114

Query: 185 VRRDNY-SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V    +   ++  +         G QLH + T+ GF   + V + L  MY  CG + +AC
Sbjct: 115 VAPTQFALSSAARAAAALSAPRPGTQLHCIGTRFGFDTELFVASNLADMYSKCGLLDEAC 174

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL-TFVSVMSACL 302
           +VF++      D +++  M+DG A  G ++ A++ FRDM    L  ++   F S +SA  
Sbjct: 175 RVFDQMPHR--DAVTWTTMIDGYAKNGSLKAAILAFRDMKCEGLVGADQHVFCSALSASG 232

Query: 303 CPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN- 358
             + G+    +H   +K+GFE  T V NA + MY+  G ++ A    +R+ + D   WN 
Sbjct: 233 GLKDGWFGRSLHCCIIKAGFELETVVRNALLDMYAKSGDLESA----SRVVKIDPGGWNV 288

Query: 359 ----TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAF 411
               ++I  Y + +    A+  Y E+   G+ P+EFTF S++      +++E    +HA 
Sbjct: 289 VSGTSLIDGYIEVDRIEEALETYTELGRQGVEPNEFTFASMIKGCAMQDLLEQGAQLHAQ 348

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V    +I++  V + L+  Y K   I  + Q+F+ +   + + WN +IN +  +G     
Sbjct: 349 VIKTSLISDSFVGSTLVYMYGKCGLISLSLQLFNEIGYHSEVAWNAVINVYAQHGHGWGA 408

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHG-------KQIHGYVLKNNLISKMSL 524
           +Q F  +  S +RP+  T    L++C+    +  G       K  HG   K    S    
Sbjct: 409 IQAFDRMTASGIRPNHITFVCLLTACSHAGLVDEGLEYFYSMKDAHGIEPKEEHYS---- 464

Query: 525 GNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
              +I +Y + G LD + + +  M ++ +   W +L+ A    G  KE      A Q++ 
Sbjct: 465 --CIIDMYGRAGRLDEAEKFISEMPVKPNAYGWCSLLGACRMRGN-KELGEI--AAQNLM 519

Query: 584 RIKPDQATFTAVLSA 598
           ++ PD       LS 
Sbjct: 520 KLDPDNTGIHVSLSG 534


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 193/620 (31%), Positives = 315/620 (50%), Gaps = 20/620 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D+   T  +S     G+   A  VFD++P+ D  ++  M+     N      + L+  + 
Sbjct: 75  DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLH-SLVTKSGFSCLVSVVNALITMYFNCGNV 239
           K   R D+  F+  L  C +   L+ G+++H  LV    F  +V  +  L+ MY  CG +
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV--LTGLLDMYAKCGEI 192

Query: 240 VDACKVFEEA--KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
             A KVF +   +  VC    +  M+ G       EE L+ F  M   ++  +E T+ ++
Sbjct: 193 KSAHKVFNDITLRNVVC----WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248

Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
           + AC        G   H   +KSG E  + +  + + MY  CG I  A  +F      D+
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAF 411
           V W  MI  Y        A+  + +M+ V I+P+  T  S+L+  G IE +E+   +H  
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
               GI  +  V+NAL+  YAK  + + A  +F   S ++I+ WN++I+GF  NG   + 
Sbjct: 369 SIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMI 529
           L  F  +    + P+  T++   S+CA + SL  G  +H Y +K   +  S + +G A++
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
             YAKCGD   +  +F+ + EK+TI+W+A+I  Y + G+   ++  F+ M    + KP++
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNE 546

Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           +TFT++LSAC H G+V++G + F SM  DY F P+  H +CM+D+L RAG L++A  +I 
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606

Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
              IQ     + A    C  H    LG I+   +L+   D  S YVL+SN+YA+ G W +
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQ 666

Query: 710 AANIRELLKRTGVIKQPGCS 729
           A  +R L+K+ G+ K  G S
Sbjct: 667 AKEVRNLMKQRGLSKIAGHS 686



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 257/559 (45%), Gaps = 51/559 (9%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT-ILSLYKNARDLV 109
           H  + D    S  L AC  L++   G ++H   ++  + ++ +V  T +L +Y    ++ 
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYAKCGEIK 193

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           S  +VF++I   +V  WT+                               MI G  +N  
Sbjct: 194 SAHKVFNDITLRNVVCWTS-------------------------------MIAGYVKNDL 222

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNA 228
            + G+ LF  M + +V  + Y++ +++  C     L  G+  H  + KSG      +V +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY  CG++ +A +VF E      D + +  M+ G    G V EAL  F+ M    ++
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSH--VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340

Query: 289 PSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+ +T  SV+S C       +G  VH  ++K G    T+V+NA + MY+ C +  +A  +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYV 399

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F    EKDIV+WN++IS ++Q      A+  +  M S  + P+  T  SL    AS G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459

Query: 403 EMVEMIHAFVFINGII--TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
            +   +HA+    G +  +++ V  AL+  YAK    + A  IF  +  +N ITW+ +I 
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIG 519

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLI 519
           G+   G  +  L+ F E+L  + +P+E T +  LS+C     +  GK+    + K+ N  
Sbjct: 520 GYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                   M+ + A+ G+L+ +L +   M I+ D   + A +     H          K 
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639

Query: 579 MQDVGRIKPDQATFTAVLS 597
           M D   + PD A++  ++S
Sbjct: 640 MLD---LHPDDASYYVLVS 655



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 246/511 (48%), Gaps = 27/511 (5%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           RQ H ++T +G    +S+   L+++Y   G   DA  VF++      D   + VM+    
Sbjct: 61  RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP--DFYLWKVMLR-CY 117

Query: 268 SVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
            + +    +++  D+L+    R  ++ F   + AC   +    G ++H Q +K       
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-----VP 172

Query: 324 SVSNAAIT----MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           S  N  +T    MY+ CG+I  A  +F  +  +++V W +MI+ Y + +L    ++ +  
Sbjct: 173 SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNR 232

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+   +  +E+T+G+L+ +   +  +   +  H  +  +GI  +  +  +L+  Y K   
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD 292

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           I  A ++F+  S  +++ W  +I G+  NG   + L  F ++   E++P+  T++  LS 
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C  I +L  G+ +HG  +K   I   ++ NA++ +YAKC     +  VF M  EKD ++W
Sbjct: 353 CGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N++IS ++Q+G   EA+  F  M     + P+  T  ++ SAC+  G +  G+ +    V
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470

Query: 617 NDYGFIPAED-HL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
              GF+ +   H+ + +LD   + G   ++ R+I     +  +  W A+       G+  
Sbjct: 471 K-LGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIGGYGKQGD-T 527

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
           +G +     + ++Q KP+     S I +A G
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTS-ILSACG 557



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 217/475 (45%), Gaps = 58/475 (12%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++ L LF ++  ++ L  + Y+  T + AC  L     G   H   +++G++    +  +
Sbjct: 224 EEGLVLFNRMRENNVLGNE-YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L +Y    D+ + +RVF+E  + D+  WT  +   T  G V+ A               
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA--------------- 327

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLV 214
                           + LF++M  ++++ +  + ASVLS C  GL   LE GR +H L 
Sbjct: 328 ----------------LSLFQKMKGVEIKPNCVTIASVLSGC--GLIENLELGRSVHGLS 369

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-EAKGYVCDHISYNVMMDGLASVGRVE 273
            K G     +V NAL+ MY  C    DA  VFE E++    D +++N ++ G +  G + 
Sbjct: 370 IKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK---DIVAWNSIISGFSQNGSIH 425

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS--VSNA 328
           EAL  F  M   S+ P+ +T  S+ SAC       VG  +HA ++K GF A +S  V  A
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            +  Y+ CG    A +IF  ++EK+ ++W+ MI  Y ++     ++  + EM     +P+
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545

Query: 389 EFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           E TF S+L++ G   MV    +   +         + +    ++   A+   ++QA  I 
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
             M     I  +    G  L+G  +       E++   M +L PD+ +  V +S+
Sbjct: 606 EKMP----IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 150/318 (47%), Gaps = 14/318 (4%)

Query: 395 LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           LL+    I+ +   H  +  NG++ +I ++  L+S Y      K A  +F  +   +   
Sbjct: 50  LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W  ++  + LN   V+ ++ +  L+    R D+   S AL +C  +  L +GK+IH  ++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
           K      + L   ++ +YAKCG++  + +VFN +  ++ + W ++I+ Y ++   +E + 
Sbjct: 170 KVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  M++   +  ++ T+  ++ AC+    +  G      +V   G   +   ++ +LD+
Sbjct: 229 LFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS-GIELSSCLVTSLLDM 286

Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN----LRLGRIIAGLLLEREQDK 690
             + G +  A RV N +H       W A+      +G+    L L + + G+     + K
Sbjct: 287 YVKCGDISNARRVFN-EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-----EIK 340

Query: 691 PSVYVLLSNIYAAAGLWE 708
           P+  V ++++ +  GL E
Sbjct: 341 PNC-VTIASVLSGCGLIE 357



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 59/386 (15%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           + +G   +AL LF ++    ++KP+  ++++ L+ C  + N   G  +H  +++ G+   
Sbjct: 319 THNGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD- 376

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            +VAN ++ +Y         K VF      D+ +W +                       
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS----------------------- 413

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                   +I+G ++NG     + LF  M+   V  +  + AS+ S C + G L  G  L
Sbjct: 414 --------IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465

Query: 211 HSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGL 266
           H+   K GF  S  V V  AL+  Y  CG+   A  +F+  E K    + I+++ M+ G 
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK----NTITWSAMIGGY 521

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS-GFEAY 322
              G    +L  F +ML    +P+E TF S++SAC    +   G +  +   K   F   
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI---STYAQRNLGRSAILAYL 378
           T      + M +  G++++A  I  ++  + D+  +   +     +++ +LG   I   L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641

Query: 379 EMQSVGIRPDEFTF----GSLLASSG 400
           ++      PD+ ++     +L AS G
Sbjct: 642 DLH-----PDDASYYVLVSNLYASDG 662



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 39/287 (13%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S++ ++  N  ++  S++G   +AL LF +++S   + P+  ++++  +ACA+L + A G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACASLGSLAVG 462

Query: 77  NQLHAYALRAGLKAYP--HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
           + LHAY+++ G  A    HV   +L  Y    D  S + +F  I+  +  +W+       
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWS------- 515

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                   AMI G  + G     + LF EM K   + +  +F S
Sbjct: 516 ------------------------AMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551

Query: 195 VLSVCD-AGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           +LS C   G++  G++  S + K   F+        ++ M    G +  A  + E+    
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP-I 610

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             D   +   + G     R +   I  + ML   L P + ++  ++S
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  308 bits (788), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/567 (32%), Positives = 292/567 (51%), Gaps = 23/567 (4%)

Query: 185 VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  +NY+F   L  C A      GR +H     +G    + V  AL+ MY  C  + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF--RDMLVASLRPSELTFVSVMSAC 301
            +F        D +++N M+ G A  G    A+       M +  LRP+  T V+++   
Sbjct: 66  HIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123

Query: 302 LCPRV---GYQVHAQAM----------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
                   G  VHA  +          KS       +  A + MY+ CG +  A  +F  
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI---RPDEFTFG-SLLASSGFIEM 404
           +  ++ V+W+ +I  +   +    A L +  M + G+    P          AS   + M
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            E +HA +  +G+  ++   N+L+S YAK   I QA  +F  M+ ++ ++++ L++G++ 
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NG   +    F ++    + PD  T+   + +C+ +++L+HG+  HG V+   L S+ S+
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            NA+I +YAKCG +D S +VFNMM  +D +SWN +I+ Y  HG GKEA + F  M ++G 
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG- 422

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             PD  TF  +LSACSH+GLV +G   F  M + YG  P  +H  CM+DLL R G+LDEA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
              I S  ++A    W AL  AC  + N+ LG+ ++ ++ E   +    +VLLSNIY+AA
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G ++EAA +R + K  G  K PGCSWI
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWI 569



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 247/540 (45%), Gaps = 67/540 (12%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H++ P+ Y+    L AC+ L +   G  +H +A+ AGL+A   V+  +L +Y     L  
Sbjct: 4   HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL-- 61

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                     PD                   A  +F  MP RDL  +NAM+ G   +G  
Sbjct: 62  ----------PD-------------------AAHIFATMPARDLVAWNAMLAGYAHHGMY 92

Query: 171 DIGIG----LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLV----------T 215
              +     +  +MH+L  R +  +  ++L  +   G L  G  +H+            +
Sbjct: 93  HHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNS 150

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           KS  +  V +  AL+ MY  CG+++ A +VF+       + ++++ ++ G     R+ +A
Sbjct: 151 KSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALIGGFVLCSRMTQA 208

Query: 276 LIRFRDMLVASL-RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            + F+ ML   L   S  +  S + AC      R+G Q+HA   KSG  A  +  N+ ++
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+  G ID+A  +F  +  KD VS++ ++S Y Q      A L + +MQ+  + PD  T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             SL+ +   +  ++     H  V I G+ +   + NALI  YAK  RI  + Q+F+ M 
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            R+I++WNT+I G+ ++G   +    F E+      PD  T    LS+C+    +  GK 
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448

Query: 509 I-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
                 HGY     L  +M     M+ L ++ G LD +   + +M +  D   W AL+ A
Sbjct: 449 WFHVMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 209/451 (46%), Gaps = 34/451 (7%)

Query: 21  LLKLNISLANLSRSGHYQDAL-HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  LA  +  G Y  A+ HL       H+L+P+  +L   L   A     A G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           HAY +RA L  +P+         +N++  ++            V   T  L    K G +
Sbjct: 136 HAYCIRACL--HPN---------RNSKSKLT----------DGVLLGTALLDMYAKCGSL 174

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSV 198
            YA  VFD MP R+   ++A+I G            LF+ M    +      S AS L  
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C +   L  G QLH+L+ KSG    ++  N+L++MY   G +  A  +F+E    V D +
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA--VKDTV 292

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           SY+ ++ G    GR EEA + F+ M   ++ P   T VS++ AC      + G   H   
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G  + TS+ NA I MY+ CG+ID +  +F  +  +DIVSWNTMI+ Y    LG+ A 
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGF-IEMVEMIHAFVFINGIITNIQVSNALISA 430
             +LEM ++G  PD  TF  LL++   SG  IE     H      G+   ++    ++  
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 472

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLIN 460
            ++   + +AY+   +M  R ++  W  L+ 
Sbjct: 473 LSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 12/195 (6%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L   + P+ YT   AL +C+ ++    G+ IH + +   L + + +  A++ +Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ-DVGRIKPDQATFTAVL 596
           L  +  +F  M  +D ++WNA+++ YA HG    AV+   +MQ  + R++P+ +T  A+L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 597 SACSHAGLVDDGTRIFDSMV------NDYGFIPAEDHL---SCMLDLLGRAGYLDEAERV 647
              +  G +  GT +    +      N        D +   + +LD+  + G L  A RV
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 648 INSQHIQARSDNWWA 662
            ++  + AR++  W+
Sbjct: 181 FDA--MPARNEVTWS 193


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/516 (34%), Positives = 272/516 (52%), Gaps = 44/516 (8%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M+ G AS      AL  +  M+     P+  +F  ++ +C   +    G Q+HAQ +
Sbjct: 32  WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91

Query: 316 K--SGFEAYTSVS-----------------------------NAAITMYSSCGKIDEACM 344
           K   G + Y   S                              A IT Y+S G    A  
Sbjct: 92  KLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARK 151

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  + E+D+VSWN MI+ Y +      A+  + EM    +RPDE T  S++   A SG 
Sbjct: 152 VFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGS 211

Query: 402 IEMVEMIHAFVFI----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
           IE+   +H++V      +G  +++++ NALI  Y+K   ++ A+ +F  +S +++++WNT
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNT 271

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN- 516
           LI G+       + L  F E+L S   P++ TL   L +CA + ++  G+ IH Y+ K  
Sbjct: 272 LIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKL 331

Query: 517 -NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             + ++ SL  ++I +YAKCGD++ + +VFN M+ +   SWNA+I  +A HG    A   
Sbjct: 332 KGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDL 391

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F  M+   R++PD  TF  +LSACSH+GL+D G +IF SM  DY   P  +H  CM+DLL
Sbjct: 392 FSRMRG-NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLL 450

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
           G +G   EAE +I++  ++     W +L  AC  HGNL L    A  L++ E +    YV
Sbjct: 451 GHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV 510

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSNIYA AG WE+ A +R +L   G+ K PGCS I
Sbjct: 511 LLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSI 546



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 160/531 (30%), Positives = 254/531 (47%), Gaps = 51/531 (9%)

Query: 129 FLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
            L  C    H D   YA  VF+ + + +L ++N M+ G   +      + ++  M  L  
Sbjct: 1   LLELCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGH 60

Query: 186 RRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             ++YSF  +L  C  +   E GRQ+H+ V K G      V  +LI+MY   G + DA K
Sbjct: 61  LPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARK 120

Query: 245 VFEEAK------------GYVC-----------------DHISYNVMMDGLASVGRVEEA 275
           VF+ +             GY                   D +S+N M+ G    GR EEA
Sbjct: 121 VFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEA 180

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA----QAMKSGFEAYTSVSNA 328
           L  F++M+  ++RP E T VSV+SAC       +G QVH+         GF +   + NA
Sbjct: 181 LELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNA 240

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I +YS CG ++ A  +F  L  KD+VSWNT+I  Y   NL + A+L + EM   G  P+
Sbjct: 241 LIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPN 300

Query: 389 EFTFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQI 443
           + T  S+L   A  G I++   IH ++   + G+     +  +LI  YAK   I+ A+Q+
Sbjct: 301 DVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQV 360

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F++M  R++ +WN +I GF ++G        FS +  + + PD+ T    LS+C+    L
Sbjct: 361 FNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLL 420

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALIS 561
             G+QI   + ++ NL  K+     MI L    G   +    +  M +E D + W +L+ 
Sbjct: 421 DLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLK 480

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRI 611
           A  +HG  + A S     Q + +I+P+ +    +LS   + AG  +D  R+
Sbjct: 481 ACKKHGNLELAES---FAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARV 528



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 229/457 (50%), Gaps = 22/457 (4%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           LL  N  L   + S     AL ++V++ S   L P+ YS    L +CA  +    G Q+H
Sbjct: 29  LLIWNTMLRGHASSSDPVSALEMYVRMVSLGHL-PNSYSFPFLLKSCAKSKAFEEGRQIH 87

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  L+ G     +V  +++S+Y     L   ++VF    + DV S T  ++     G   
Sbjct: 88  AQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFR 147

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A +VFD++ +RD+  +NAMITG  ENG  +  + LF+EM + +VR D  +  SV+S C 
Sbjct: 148 SARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACA 207

Query: 200 DAGLLEFGRQLHSLVTKS----GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC- 254
            +G +E GRQ+HS V       GFS  + +VNALI +Y  CG+V  A  +FE   G  C 
Sbjct: 208 QSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE---GLSCK 264

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVH 311
           D +S+N ++ G       +EAL+ F++ML +   P+++T +SV+ AC       +G  +H
Sbjct: 265 DVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIH 324

Query: 312 AQAMK--SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
               K   G    TS+  + I MY+ CG I+ A  +F  +  + + SWN MI  +A    
Sbjct: 325 VYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGR 384

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN-GIITNIQVSN 425
             +A   +  M+   + PD+ TF  LL++   SG +++   I   +  +  +   ++   
Sbjct: 385 ANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYG 444

Query: 426 ALISAYAKNERIKQAYQIFHN--MSPRNIITWNTLIN 460
            +I     +   K+A ++ H   M P  +I W +L+ 
Sbjct: 445 CMIDLLGHSGLFKEAEEMIHTMPMEPDGVI-WCSLLK 480



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 184/369 (49%), Gaps = 41/369 (11%)

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
           A  +F  +QE +++ WNTM+  +A  +   SA+  Y+ M S+G  P+ ++F  LL   A 
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI--------------------- 437
           S   E    IHA V   G   +  V  +LIS YA+N  +                     
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 438 ----------KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                     + A ++F  ++ R++++WN +I G++ NG   + L+ F E++ + +RPDE
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196

Query: 488 YTLSVALSSCARISSLRHGKQIHGYV----LKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
            TL   +S+CA+  S+  G+Q+H +V      +   S + + NA+I LY+KCGD++ +  
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           +F  +  KD +SWN LI  Y      KEA+  F+ M   G   P+  T  +VL AC+H G
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGEC-PNDVTLLSVLPACAHLG 315

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
            +D G  I   +      +  E  L + ++D+  + G ++ A +V NS   ++ S +W A
Sbjct: 316 AIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS-SWNA 374

Query: 663 LFSACAAHG 671
           +    A HG
Sbjct: 375 MIFGFAMHG 383



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 37/301 (12%)

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F  +   N++ WNT++ G   +  PV  L+ +  ++     P+ Y+    L SCA+
Sbjct: 17  AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76

Query: 500 ISSLRHGKQIHGYVLK----------NNLISKMSLG---------------------NAM 528
             +   G+QIH  VLK           +LIS  +                        A+
Sbjct: 77  SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           IT YA  GD   + +VF+ + E+D +SWNA+I+ Y ++G  +EA+  FK M     ++PD
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN-VRPD 195

Query: 589 QATFTAVLSACSHAGLVDDGTRIFD---SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           + T  +V+SAC+ +G ++ G ++        +D+GF  +   ++ ++DL  + G ++ A 
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            +   + +  +    W        H NL    ++    + R  + P+   LLS + A A 
Sbjct: 256 GLF--EGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 706 L 706
           L
Sbjct: 314 L 314


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 215/669 (32%), Positives = 337/669 (50%), Gaps = 47/669 (7%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  LHA+AL++G  ++  VAN++++ Y             S +  P        L+A   
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFY-------------SSLPRP-------LLAA--- 67

Query: 136 MGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSF 192
                 A  VFD +P   RD+  +N+++   + +   D  +  FR M     V    +SF
Sbjct: 68  ------AFAVFDDIPPAARDVASWNSLLNPLSRHRPLD-ALSRFRSMLSSSTVLPSPHSF 120

Query: 193 ASVLSVCDAGLLEFGRQL-HSLVTK--SGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           A+  +              H+L  K  S  S  V V  +L+ MY   G V DA ++F+  
Sbjct: 121 AAAFTAAARAASAPAGTAAHALACKIPSAVSN-VYVCTSLLNMYCKLGIVSDARRMFDGM 179

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPR--- 305
                +  S++ M+ G A+    EEA   FR ML       SE    +V+SA   P    
Sbjct: 180 PQR--NSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLL 237

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+H   +K G   + SV N+ +TMY+  G +  A  +F   +E++ ++W+ MI+ YA
Sbjct: 238 MGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYA 297

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIITNIQ 422
           Q     SA+  + +M + G  P EFTF G L ASS  G + + +  H  +   G    I 
Sbjct: 298 QNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIY 357

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           V +AL+  YAK   I  A + F  +   +I+ W  +++G + NG   + L  ++ +    
Sbjct: 358 VKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEG 417

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           + P + T++  L +CA I++L  GKQ+H  ++K  L     +G+A+ T+Y+KCG+L+  +
Sbjct: 418 IIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGM 477

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF  + ++D I+WN++IS ++Q+G G  A+  F+ M+  G I PD  TF  +L ACSH 
Sbjct: 478 SVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTI-PDNITFINILCACSHM 536

Query: 603 GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
           GLVD G   F  M  DYG  P  DH +CM+D+L RAG L EA+  I S  I   +  W  
Sbjct: 537 GLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRI 596

Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           +  AC +  +  +G      L+E      S Y+LLSNIYA+   W +   +R L++  GV
Sbjct: 597 VLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGV 656

Query: 723 IKQPGCSWI 731
            K PGCSW+
Sbjct: 657 NKDPGCSWV 665



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 204/420 (48%), Gaps = 27/420 (6%)

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK--IDEACMIFARLQE--KDIVSWN 358
           CPR G  +HA A+KSG  ++  V+N+ I  YSS  +  +  A  +F  +    +D+ SWN
Sbjct: 27  CPRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWN 86

Query: 359 TMISTYAQRNLGRSAILAYLEM-QSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVF- 413
           ++++  + R+    A+  +  M  S  + P   +F    +  A +         HA    
Sbjct: 87  SLLNPLS-RHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK 145

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           I   ++N+ V  +L++ Y K   +  A ++F  M  RN  +W+T++ G+       +   
Sbjct: 146 IPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD 205

Query: 474 HFSELLMSELRPDEYTLSVALSSCARIS---SLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            F   LM E  P E +  VA +  + +S    L  G+Q+HG ++K+ L+  +S+ N+++T
Sbjct: 206 LFR--LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVT 263

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAK G +  +  VF    E+++I+W+A+I+ YAQ+GE   AVS F  M   G   P + 
Sbjct: 264 MYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAG-FTPTEF 322

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF  VL+A S  G +  G +    MV   GF       S ++D+  + G + +A+   + 
Sbjct: 323 TFVGVLNASSDLGALAVGKQAHGLMVK-LGFEVQIYVKSALVDMYAKCGCIADAKEGFD- 380

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK----PSVYVLLSNIYAAAGL 706
           Q  +     W A+ S     G+++ G     L L    DK    PS   + S + A AG+
Sbjct: 381 QLYEVDIVLWTAMVS-----GHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGI 435



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +++AL L+ ++     + P   ++++ L ACA +     G QLH   ++ GL    
Sbjct: 399 QNGEHEEALTLYARM-DKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGA 457

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-D 151
            V + + ++Y    +L     VF  I + DV +W + +S  ++ G  + A ++F++M  +
Sbjct: 458 PVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 517

Query: 152 RDLP---VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDAGLL 204
             +P    +  ++  C+  G  D G   F  M K   L  R D+Y+    +LS   AG+L
Sbjct: 518 GTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS--RAGML 575

Query: 205 EFGRQLHSLVTKSGFSCLVSVV 226
           +  +     +T    +CL  +V
Sbjct: 576 KEAKDFIESITIDHGTCLWRIV 597


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 185/594 (31%), Positives = 307/594 (51%), Gaps = 11/594 (1%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +D A + F  +      ++N MI G  +       +  +R M     R D ++F  VL
Sbjct: 68  GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127

Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
             C  AG L  GR  H+ V K G    V   N+L+ +Y   G V DA +VF+       D
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPAR--D 185

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPR---VGYQVH 311
            +S+N M+DG  S G    AL  FR+M  A  +    +  ++ ++AC       +G ++H
Sbjct: 186 IVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIH 245

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A++ G E    V  + + MY  CG +  A  +FA++  + +V+WN MI  YA      
Sbjct: 246 GYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPV 305

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALI 428
            A   +++M+  G + +  T  +LL +    E       +HA+V     + ++ +  AL+
Sbjct: 306 DAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALL 365

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K  +++ + +IF  ++ + +++WN +I  ++      + +  F ELL   L PD +
Sbjct: 366 EMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYF 425

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           T++  + +   + S+R  KQ+H Y++K        + NA++ +YA+CG++  S  +F+ M
Sbjct: 426 TMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKM 485

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
             KD ISWN +I  YA HG+GK A+  F  M+  G ++P+++TF +VL+ACS +GL  +G
Sbjct: 486 PGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSG-MEPNESTFVSVLTACSVSGLEAEG 544

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            + F+SM  +YG IP  +H  CM DLLGRAG L E  R I +  I   S  W +L +A  
Sbjct: 545 WKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASR 604

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
              ++ +    A  + + E +    YV+LS++YA AG WE+   IR L+K  G+
Sbjct: 605 NKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGL 658



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 242/520 (46%), Gaps = 45/520 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++    L  CA       G   HA  ++ GL A  + AN++++LY     +   +R
Sbjct: 117 RPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAER 176

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           VF  +   D+ SW T                               M+ G   NG   + 
Sbjct: 177 VFDGMPARDIVSWNT-------------------------------MVDGYVSNGMGALA 205

Query: 174 IGLFREMHK-LDVRRDNYS-FASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
           +  FREM+  L V  D+    A++ + C    L  GR++H    + G    V V  +L+ 
Sbjct: 206 LACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVD 265

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CGNV  A  VF  AK  +   +++N M+ G A   R  +A   F  M V   +   
Sbjct: 266 MYCKCGNVFFAENVF--AKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEV 323

Query: 292 LTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T +++++AC        G  VHA  ++  F  +  +  A + MY   GK++ +  IF +
Sbjct: 324 VTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQ 383

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMV 405
           + +K +VSWN MI+ Y    + + AI  +LE+ +  + PD FT  +++ +    G I   
Sbjct: 384 ITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQC 443

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +H+++   G   +  + NA++  YA+   I  + +IF  M  +++I+WNT+I G+ ++
Sbjct: 444 KQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIH 503

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG--KQIHGYVLKNNLISKMS 523
           G     L+ F E+  S + P+E T    L++C+ +S L     K+ +    +  +I ++ 
Sbjct: 504 GQGKIALEMFDEMKCSGMEPNESTFVSVLTACS-VSGLEAEGWKEFNSMQQEYGMIPQIE 562

Query: 524 LGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
               M  L  + G+L   LR + NM I   +  W +L++A
Sbjct: 563 HYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTA 602



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 168/322 (52%), Gaps = 6/322 (1%)

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I  + + G++DEA   FA +        N MI  +A  +L   A+ AY  M   G RPD 
Sbjct: 61  ILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDR 120

Query: 390 FTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           FTF  +L   A +G +      HA V   G+  ++  +N+L++ YAK   +  A ++F  
Sbjct: 121 FTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDG 180

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRH 505
           M  R+I++WNT+++G++ NG     L  F E+  + ++  D   +  AL++C   S+L  
Sbjct: 181 MPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALAL 240

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G++IHGY +++ L   + +G +++ +Y KCG++  +  VF  M  +  ++WN +I  YA 
Sbjct: 241 GREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYAL 300

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           +    +A  CF  M+ V   + +  T   +L+AC+       G  +   +V  + F+P  
Sbjct: 301 NERPVDAFDCFMQMR-VDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRH-FLPHV 358

Query: 626 DHLSCMLDLLGRAGYLDEAERV 647
              + +L++ G+ G ++ +E++
Sbjct: 359 VLETALLEMYGKVGKVESSEKI 380



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 196/439 (44%), Gaps = 60/439 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  F +++ + ++  D   +   LAAC      A G ++H YA+R GL+    V  +++
Sbjct: 205 ALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLV 264

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y                                K G+V +A  VF KMP R +  +N 
Sbjct: 265 DMY-------------------------------CKCGNVFFAENVFAKMPLRTVVTWNC 293

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTK 216
           MI G   N         F +M     + +  +  ++L+ C   ++ L  FGR +H+ V +
Sbjct: 294 MIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSL--FGRSVHAYVVR 351

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEE 274
             F   V +  AL+ MY   G V  + K+F    G + D   +S+N M+     +   +E
Sbjct: 352 RHFLPHVVLETALLEMYGKVGKVESSEKIF----GQITDKTLVSWNNMIAAYMYMEMYQE 407

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  F ++L   L P   T  +V+ A +     R   Q+H+  +K G+   T + NA + 
Sbjct: 408 AIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMH 467

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG I  +  IF ++  KD++SWNT+I  YA    G+ A+  + EM+  G+ P+E T
Sbjct: 468 MYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNEST 527

Query: 392 FGSLLA--------SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           F S+L         + G+ E   M   +    G+I  I+    +     +   +++  + 
Sbjct: 528 FVSVLTACSVSGLEAEGWKEFNSMQQEY----GMIPQIEHYGCMTDLLGRAGELREVLRF 583

Query: 444 FHNM--SPRNIITWNTLIN 460
             NM  +P + I W +L+ 
Sbjct: 584 IENMPIAPTSRI-WGSLLT 601



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 89/175 (50%)

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            +LI ++    R+ +A   F  ++       N +I GF     P+  L  +  +L +  R
Sbjct: 58  KSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGAR 117

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD +T  V L  CAR  +L  G+  H  V+K  L + +   N+++ LYAK G +  + RV
Sbjct: 118 PDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERV 177

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
           F+ M  +D +SWN ++  Y  +G G  A++CF+ M D  ++  D     A L+AC
Sbjct: 178 FDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAAC 232



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 76/150 (50%), Gaps = 5/150 (3%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           YQ+A+ LF+++  +  L PD ++++T + A   L +     Q+H+Y ++ G      + N
Sbjct: 405 YQEAIALFLEL-LNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMN 463

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP----DR 152
            ++ +Y    ++V+ + +F ++   DV SW T +      G    A E+FD+M     + 
Sbjct: 464 AVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEP 523

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           +   + +++T C+ +G E  G   F  M +
Sbjct: 524 NESTFVSVLTACSVSGLEAEGWKEFNSMQQ 553



 Score = 43.1 bits (100), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           S  S   ++I  +   G +D +   F  +        N +I  +A      +A++ ++AM
Sbjct: 52  SSGSRPKSLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAM 111

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
            D G  +PD+ TF  VL  C+ AG + +G R   + V   G        + ++ L  + G
Sbjct: 112 LDAG-ARPDRFTFPVVLKCCARAGALGEG-RAAHAAVIKLGLGADVYTANSLVALYAKLG 169

Query: 640 YLDEAERVIN 649
            + +AERV +
Sbjct: 170 LVGDAERVFD 179


>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
          Length = 688

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 195/605 (32%), Positives = 293/605 (48%), Gaps = 80/605 (13%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L   R  H  V KS  +    ++N L++ Y   G + +A +VF+     + +  SYN ++
Sbjct: 33  LPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIP--LRNTFSYNALL 90

Query: 264 DGLASVGRVEEALIRFR----------DMLVASLRP-----------------------S 290
              A +GR +EA   F           + +VA+L                         +
Sbjct: 91  SAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLN 150

Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
             +F S +SAC      R G QVH    +S       +  A + MY+ C +  +A  +F 
Sbjct: 151 AYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE 406
            + E+++VSWN++I+ Y Q      A++ ++EM + G  PDE T  S++ A +G     E
Sbjct: 211 AMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAERE 270

Query: 407 --MIHA-FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR------------- 450
              +HA  V  + +  ++ ++NAL+  YAK  R  +A  IF +M  R             
Sbjct: 271 GRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYA 330

Query: 451 ------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
                             N+I WN LI  +  NG   + ++ F +L    + P  YT   
Sbjct: 331 KSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGN 390

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLYAKCGDLDCSLRVFN 546
            L++C  I+ L+ G+Q H +VLK          S + +GN+++ +Y K G +D   +VF 
Sbjct: 391 VLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFE 450

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D +SWNA+I  YAQ+G  K+A+  F+ M       PD  T   VLSAC H+GLVD
Sbjct: 451 RMAARDNVSWNAMIVGYAQNGRAKDALHLFERML-CSNENPDSVTMIGVLSACGHSGLVD 509

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G R F  M  D+G  P+ DH +CM+DLLGRAG+L EAE +I     +  S  W +L  A
Sbjct: 510 EGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGA 569

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ LG   AG L E + +    YVLLSN+YA  G W +   +R  +K  GV KQP
Sbjct: 570 CRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQP 629

Query: 727 GCSWI 731
           GCSWI
Sbjct: 630 GCSWI 634



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/536 (27%), Positives = 250/536 (46%), Gaps = 51/536 (9%)

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H   L++ +     + NT++S Y     L   +RVF  I   + +S+   LSA  ++G  
Sbjct: 40  HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGL--FREMHKLDVRRDNYSFASVLS 197
           D A  +F+ +PD D   YNA++     +G    G  L     MH  D   + YSFAS LS
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159

Query: 198 VCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C A   L  G Q+H LV +S  +  V +  AL+ MY  C   VDA +VF+       + 
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER--NV 217

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
           +S+N ++      G V EAL+ F +M+     P E+T  SVMSAC      R G QVHA 
Sbjct: 218 VSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAH 277

Query: 314 AMKSG-FEAYTSVSNAAITMYSSCGK-------------------------------IDE 341
            +K         ++NA + MY+ CG+                               +++
Sbjct: 278 MVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVED 337

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A ++F+++ EK++++WN +I+ YAQ      AI  +++++   I P  +T+G++L + G 
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397

Query: 402 IEMVEM-----IH----AFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
           I ++++     +H     F F  G  +++ V N+L+  Y K   I    ++F  M+ R+ 
Sbjct: 398 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 457

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHG 511
           ++WN +I G+  NG     L  F  +L S   PD  T+   LS+C     +  G++  H 
Sbjct: 458 VSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHF 517

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQH 566
               + +         M+ L  + G L +    + +M  E D++ W +L+ A   H
Sbjct: 518 MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 143/591 (24%), Positives = 243/591 (41%), Gaps = 97/591 (16%)

Query: 25  NISLANLSR--SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           N  +A L+R   GH  DAL     +H+      + YS ++ L+ACA  ++   G Q+H  
Sbjct: 118 NAVVAALARHGRGHAGDALRFLAAMHAD-DFVLNAYSFASALSACAAEKDLRTGEQVHGL 176

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
             R+      H+   ++ +Y      V  +RVF                           
Sbjct: 177 VARSPHADDVHIGTALVDMYAKCERPVDARRVF--------------------------- 209

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAG 202
               D MP+R++  +N++IT   +NG     + LF EM       D  + +SV+S C AG
Sbjct: 210 ----DAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSAC-AG 264

Query: 203 LL--EFGRQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK--------- 250
           L     GRQ+H+ +V +      + + NAL+ MY  CG   +A  +F+            
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324

Query: 251 ---GYVC-----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
              GY                   + I++NV++   A  G  EEA+  F  +   S+ P+
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384

Query: 291 ELTFVSVMSAC---LCPRVGYQVHAQAMKSGF------EAYTSVSNAAITMYSSCGKIDE 341
             T+ +V++AC      ++G Q H   +K GF      E+   V N+ + MY   G ID+
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
              +F R+  +D VSWN MI  YAQ    + A+  +  M      PD  T   +L++ G 
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504

Query: 402 IEMVE----MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWN 456
             +V+      H     +GI  +      ++    +   +K+A ++  +M +  + + W 
Sbjct: 505 SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWA 564

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC-------ARISSLRHGKQI 509
           +L+    L+     G +    L   EL P+     V LS+        A +  +R   + 
Sbjct: 565 SLLGACRLHKNVELGERTAGRLF--ELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKD 622

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDC------SLRVFNMMIEKDTI 554
            G V K    S + +G+ M    A+     C      +LR+  M + + +I
Sbjct: 623 RG-VSKQPGCSWIEIGSKMNVFLARDNRHPCRNEIHSTLRIIQMEMCRTSI 672



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 167/365 (45%), Gaps = 40/365 (10%)

Query: 392 FGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
              LL S+  +      H  V  + +     + N L+S YA+  R+++A ++F  +  RN
Sbjct: 23  LADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRN 82

Query: 452 IITWNTLINGFLLNGFPVQ--------------------------GLQHFSELL--MSEL 483
             ++N L++ +   G P +                          G  H  + L  ++ +
Sbjct: 83  TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142

Query: 484 RPDE-----YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
             D+     Y+ + ALS+CA    LR G+Q+HG V ++     + +G A++ +YAKC   
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERP 202

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             + RVF+ M E++ +SWN+LI+ Y Q+G   EA+  F  M   G   PD+ T ++V+SA
Sbjct: 203 VDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATG-FFPDEVTLSSVMSA 261

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS- 657
           C+      +G ++   MV            + ++D+  + G   EA  + +S  + +RS 
Sbjct: 262 CAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDS--MPSRSV 319

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
            +  ++ +  A   N+   +++   ++E+       + +L   YA  G  EEA  +   L
Sbjct: 320 VSETSILAGYAKSANVEDAQVVFSQMVEKNV---IAWNVLIAAYAQNGEEEEAIRLFVQL 376

Query: 718 KRTGV 722
           KR  +
Sbjct: 377 KRDSI 381


>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 187/585 (31%), Positives = 300/585 (51%), Gaps = 46/585 (7%)

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +  +S+LS C D   L  GRQLH  +   GF     +V  L+T Y     +VDA  + E 
Sbjct: 101 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 160

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPR 305
           +   +     +N+++      G  ++AL  ++ M+   +RP   T+ SV+ AC   L   
Sbjct: 161 SN--ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 218

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G +VH     S  +    V NA I+MY  CGK+  A  +F ++ E+D VSWN+MIS YA
Sbjct: 219 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 278

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTF--------------------------GSLLASS 399
              +   A   +  M +  I  +   +                          GS L S 
Sbjct: 279 SMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSV 338

Query: 400 GFI------------EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
             I            ++ + IH+F   +       V NALI+ Y++ + +K AY +F  M
Sbjct: 339 ALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLM 398

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             +++ITWN++I+G        +      E+L+  + P+  T++  L  CAR+++L+HGK
Sbjct: 399 EAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGK 458

Query: 508 QIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + H Y+ +  +    + L NA++ +YA+ G +  + RVF+M+ E+D +++ ++I+ Y   
Sbjct: 459 EFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 518

Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
           GEG+ A+  F+ M +  +IKPD  T  AVLSACSH+GLV  G  +F+ M + YG  P  +
Sbjct: 519 GEGQAALKLFEEMNNF-QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLE 577

Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER 686
           H +CM DL GRAG L++A+ +I +   +     W  L  AC  H N  +G   A  LLE 
Sbjct: 578 HFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEM 637

Query: 687 EQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + P  YVL++N+YAAAG W + A +R  ++  GV K PGC+W+
Sbjct: 638 KPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWV 682



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 139/588 (23%), Positives = 259/588 (44%), Gaps = 81/588 (13%)

Query: 27  SLANLSRSGHYQDALHL--FVQIHSSHKLKPDI-YSLSTTLAACANLRNAAFGNQLHAYA 83
           SL   +  G+  DA      +++H+S   +  I + +S+ L++C ++++ A G QLH + 
Sbjct: 67  SLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHI 126

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +  G + +P +   +++ Y +A +L+    V +E  N                       
Sbjct: 127 ISLGFEQHPILVPKLVTFY-SAFNLLVDAHVITENSN----------------------- 162

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
            +    P      +N +I+    NG+    +  +++M K  +R DN+++ SVL  C   L
Sbjct: 163 -ILHPFP------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEEL 215

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L FG+++H  +  S     + V NALI+MY  CG V  A  +F++      D +S+N M
Sbjct: 216 DLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPER--DAVSWNSM 273

Query: 263 MDGLASVGRVEEALIRFRDMLVASLR-------------------PSELTFVSVMSAC-- 301
           +   AS+G   EA   F  M    +                       L  +S M  C  
Sbjct: 274 ISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGS 333

Query: 302 ------------LC-----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
                        C      ++G ++H+ A++S F    +V NA ITMYS C  +  A +
Sbjct: 334 HLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYL 393

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  ++ K +++WN++IS     +    A     EM   GI P+  T  S+L   A    
Sbjct: 394 LFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVAN 453

Query: 402 IEMVEMIHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           ++  +  H ++        ++ + NAL+  YA++ ++ +A ++F  +  R+ +T+ ++I 
Sbjct: 454 LQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIA 513

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLI 519
           G+ + G     L+ F E+   +++PD  T+   LS+C+    +  G+ +   +     L 
Sbjct: 514 GYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLT 573

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQH 566
             +     M  L+ + G L+ +  +   M  K T + W  LI A   H
Sbjct: 574 PHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 621



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 217/453 (47%), Gaps = 25/453 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ +++  R+G  Q AL  + Q+     ++PD ++  + L AC    +  FG ++H    
Sbjct: 170 NLLISSYVRNGFCQKALSAYKQM-VKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 228

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            + +K    V N ++S+Y     +   + +F +I   D  SW + +S    MG  + A E
Sbjct: 229 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 288

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           +F  M   D+     ++N +  G    G     + L  +M K     D+ +    L  C 
Sbjct: 289 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACS 348

Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHI 257
             G  + G+++HS   +S F  + +V NALITMY  C ++  A  +F+  EAK      I
Sbjct: 349 HIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSL----I 404

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAM-- 315
           ++N ++ G   + R EEA    R+ML+  + P+ +T  SV+   LC RV    H +    
Sbjct: 405 TWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLP--LCARVANLQHGKEFHC 462

Query: 316 ----KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               +  F+ +  + NA + MY+  GK+ EA  +F  L E+D +++ +MI+ Y  +  G+
Sbjct: 463 YMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQ 522

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMI-HAFVFINGIITNIQVSNAL 427
           +A+  + EM +  I+PD  T  ++L++   SG +   +++      + G+  +++    +
Sbjct: 523 AALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACM 582

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIIT-WNTLI 459
              + +   + +A +I  NM  +     W TLI
Sbjct: 583 TDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLI 615


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/567 (32%), Positives = 292/567 (51%), Gaps = 23/567 (4%)

Query: 185 VRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDAC 243
           V  +NY+F   L  C A      GR +H     +G    + V  AL+ MY  C  + DA 
Sbjct: 6   VAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAA 65

Query: 244 KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF--RDMLVASLRPSELTFVSVMSAC 301
            +F        D +++N M+ G A  G    A+       M +  LRP+  T V+++   
Sbjct: 66  HIFATMPAR--DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLL 123

Query: 302 LCPRV---GYQVHAQAM----------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
                   G  VHA  +          KS       +  A + MY+ CG +  A  +F  
Sbjct: 124 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 183

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI---RPDEFTFG-SLLASSGFIEM 404
           +  ++ V+W+ +I  +   +    A L +  M + G+    P          AS   + M
Sbjct: 184 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRM 243

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            E +HA +  +G+  ++   N+L+S YAK   I QA  +F  M+ ++ ++++ L++G++ 
Sbjct: 244 GEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ 303

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NG   +    F ++    + PD  T+   + +C+ +++L+HG+  HG V+   L S+ S+
Sbjct: 304 NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSI 363

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
            NA+I +YAKCG +D S +VFNMM  +D +SWN +I+ Y  HG GKEA + F  M ++G 
Sbjct: 364 CNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG- 422

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
             PD  TF  +LSACSH+GLV +G   F  M + YG  P  +H  CM+DLL R G+LDEA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
              I S  ++A    W AL  AC  + N+ LG+ ++ ++ E   +    +VLLSNIY+AA
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G ++EAA +R + K  G  K PGCSWI
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWI 569



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 247/540 (45%), Gaps = 67/540 (12%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H++ P+ Y+    L AC+ L +   G  +H +A+ AGL+A   V+  +L +Y     L  
Sbjct: 4   HRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACL-- 61

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
                     PD                   A  +F  MP RDL  +NAM+ G   +G  
Sbjct: 62  ----------PD-------------------AAHIFATMPARDLVAWNAMLAGYAHHGMY 92

Query: 171 DIGIG----LFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLV----------T 215
              +     +  +MH+L  R +  +  ++L  +   G L  G  +H+            +
Sbjct: 93  HHAVAHLLSMQMQMHRL--RPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNS 150

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           KS  +  V +  AL+ MY  CG+++ A +VF+       + ++++ ++ G     R+ +A
Sbjct: 151 KSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR--NEVTWSALIGGFVLCSRMTQA 208

Query: 276 LIRFRDMLVASL-RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
            + F+ ML   L   S  +  S + AC      R+G Q+HA   KSG  A  +  N+ ++
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+  G ID+A  +F  +  KD VS++ ++S Y Q      A L + +MQ+  + PD  T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328

Query: 392 FGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             SL+ +   +  ++     H  V I G+ +   + NALI  YAK  RI  + Q+F+ M 
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            R+I++WNT+I G+ ++G   +    F E+      PD  T    LS+C+    +  GK 
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448

Query: 509 I-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISA 562
                 HGY     L  +M     M+ L ++ G LD +   + +M +  D   W AL+ A
Sbjct: 449 WFHVMGHGY----GLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 209/451 (46%), Gaps = 34/451 (7%)

Query: 21  LLKLNISLANLSRSGHYQDAL-HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  LA  +  G Y  A+ HL       H+L+P+  +L   L   A     A G  +
Sbjct: 76  LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 135

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           HAY +RA L  +P+         +N++  ++            V   T  L    K G +
Sbjct: 136 HAYCIRACL--HPN---------RNSKSKLT----------DGVLLGTALLDMYAKCGSL 174

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSV 198
            YA  VFD MP R+   ++A+I G            LF+ M    +      S AS L  
Sbjct: 175 LYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C +   L  G QLH+L+ KSG    ++  N+L++MY   G +  A  +F+E    V D +
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA--VKDTV 292

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
           SY+ ++ G    GR EEA + F+ M   ++ P   T VS++ AC      + G   H   
Sbjct: 293 SYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV 352

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G  + TS+ NA I MY+ CG+ID +  +F  +  +DIVSWNTMI+ Y    LG+ A 
Sbjct: 353 IIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEAT 412

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGF-IEMVEMIHAFVFINGIITNIQVSNALISA 430
             +LEM ++G  PD  TF  LL++   SG  IE     H      G+   ++    ++  
Sbjct: 413 ALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDL 472

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLIN 460
            ++   + +AY+   +M  R ++  W  L+ 
Sbjct: 473 LSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 12/195 (6%)

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +L   + P+ YT   AL +C+ ++    G+ IH + +   L + + +  A++ +Y KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ-DVGRIKPDQATFTAVL 596
           L  +  +F  M  +D ++WNA+++ YA HG    AV+   +MQ  + R++P+ +T  A+L
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 597 SACSHAGLVDDGTRIFDSMV------NDYGFIPAEDHL---SCMLDLLGRAGYLDEAERV 647
              +  G +  GT +    +      N        D +   + +LD+  + G L  A RV
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 648 INSQHIQARSDNWWA 662
            ++  + AR++  W+
Sbjct: 181 FDA--MPARNEVTWS 193


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 187/589 (31%), Positives = 297/589 (50%), Gaps = 91/589 (15%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VA 285
            +L+  +   G + DA   F+       D + +N MM   A       A+  F  +L   
Sbjct: 98  TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157

Query: 286 SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---- 336
           SLRP + +F +++SA      L      Q+H   +KSG  A  SVSNA I +Y  C    
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217

Query: 337 ------------------------------GKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
                                         G ++ A  +F  +  K  V WN MIS Y Q
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 277

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ- 422
             +   A   +  M S  +  DEFTF S+L   A++GF    + +H      G I  +Q 
Sbjct: 278 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH------GQIIRLQP 331

Query: 423 ---------VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG------- 466
                    V+NAL++ Y+K  +I  A +IF  M+ +++++WNT+++G++ +G       
Sbjct: 332 NFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 391

Query: 467 -FPV-----------------------QGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
            F V                         L+ F+++   +++P +YT + A+++C  + +
Sbjct: 392 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 451

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L+HG+Q+H ++++    +  S GNA++T+YAKCG ++ +  VF +M   D++SWNA+ISA
Sbjct: 452 LKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISA 511

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
             QHG G+EA+  F  M   G I PD+ +F  +L+AC+HAGLVD+G   F+SM  D+G  
Sbjct: 512 LGQHGHGREALELFDQMVAEG-IDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGIS 570

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P EDH + ++DLLGR+G + EA  +I +   +     W A+ S C  +G++  G   A  
Sbjct: 571 PGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQ 630

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L          Y+LLSN Y+AAG W +AA +R+L++  GV K+PGCSWI
Sbjct: 631 LFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 679



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 229/490 (46%), Gaps = 49/490 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN--AAFGNQLHAY 82
           N  ++  +R+     A+ +F  +  S  L+PD YS +  ++A   + N  A    QLH  
Sbjct: 131 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 190

Query: 83  ALRAGLKAYPHVANTILSLY---KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            L++G  A   V+N +++LY            ++V  E+ + D  +WTT +    + G V
Sbjct: 191 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDV 250

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           + A  VF+++  +   V+NAMI+G  ++G       LFR M    V  D ++F SVLS C
Sbjct: 251 NAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSAC 310

Query: 200 -DAGLLEFGRQLHSLVTK--SGF--SCLVSVVNALITMYFNCGNVVDACKVFEEA----- 249
            +AG    G+ +H  + +    F     + V NAL+T+Y   G +V A ++F+       
Sbjct: 311 ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV 370

Query: 250 -------KGYV---C--------------DHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                   GY+   C              + +S+ VM+ G    G  E+AL  F  M   
Sbjct: 371 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 430

Query: 286 SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            ++P + T+   ++AC      + G Q+HA  ++ GFEA  S  NA +TMY+ CG +++A
Sbjct: 431 DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDA 490

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
            ++F  +   D VSWN MIS   Q   GR A+  + +M + GI PD  +F ++L +    
Sbjct: 491 RLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHA 550

Query: 403 EMV-EMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWN 456
            +V E  H F  +    GI         LI    ++ RI +A  +   M   P   I W 
Sbjct: 551 GLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI-WE 609

Query: 457 TLINGFLLNG 466
            +++G   NG
Sbjct: 610 AILSGCRTNG 619



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 223/517 (43%), Gaps = 84/517 (16%)

Query: 281 DMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           D+L A   P  LT   +    L P +     A   +S  +     + + +  +++ G++ 
Sbjct: 55  DLLHAPSHP-HLTLRLIHLYTLSPDLATP--AALFRSDPDPGPVAATSLVAAHAAAGRLR 111

Query: 341 EACMIFARLQ--EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLA 397
           +A   F  +    +D V  N M+S +A+ +L   A+  +  +   G +RPD+++F +L++
Sbjct: 112 DAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALIS 171

Query: 398 SSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNER---------------- 436
           + G +  +       +H  V  +G    + VSNALI+ Y K +                 
Sbjct: 172 AVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPD 231

Query: 437 ------------------IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
                             +  A  +F  +  +  + WN +I+G++ +G      + F  +
Sbjct: 232 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 291

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV--LKNNLISKMSL--GNAMITLYAK 534
           +  ++  DE+T +  LS+CA      HGK +HG +  L+ N + + +L   NA++TLY+K
Sbjct: 292 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 351

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM--------------- 579
            G +  + R+F+ M  KD +SWN ++S Y   G   +AV  FK M               
Sbjct: 352 GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY 411

Query: 580 ------QDVGR---------IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
                 +D  +         +KP   T+   ++AC   G +  G ++   +V   GF  +
Sbjct: 412 VHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQ-CGFEAS 470

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
               + +L +  + G +++A R++        S +W A+ SA   HG+ R    +   ++
Sbjct: 471 NSAGNALLTMYAKCGAVNDA-RLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 529

Query: 685 EREQDKPSVYVLLSNIYAA--AGLWEEAANIRELLKR 719
               D P     L+ + A   AGL +E  +  E +KR
Sbjct: 530 AEGID-PDRISFLTILTACNHAGLVDEGFHYFESMKR 565


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 174/515 (33%), Positives = 280/515 (54%), Gaps = 13/515 (2%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           N LI MY  C   + A KVF+       + +S++ +M G    G ++ +L  F +M    
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPER--NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG 473

Query: 287 LRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           + P+E TF + + AC        G Q+H   +K GFE    V N+ + MYS CG+I+EA 
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI--RPDEFTFGSLL---AS 398
            +F R+ ++ ++SWN MI+ +     G  A+  +  MQ   I  RPDEFT  SLL   +S
Sbjct: 534 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 593

Query: 399 SGFIEMVEMIHAFVFINGI--ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
           +G I   + IH F+  +G    ++  ++ +L+  Y K   +  A + F  +  + +I+W+
Sbjct: 594 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 653

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           +LI G+   G  V+ +  F  L     + D + LS  +   A  + LR GKQ+    +K 
Sbjct: 654 SLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL 713

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
               + S+ N+++ +Y KCG +D + + F  M  KD ISW  +I+ Y +HG GK++V  F
Sbjct: 714 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 773

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M     I+PD+  + AVLSACSH+G++ +G  +F  ++  +G  P  +H +C++DLLG
Sbjct: 774 YEMLR-HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLG 832

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           RAG L EA+ +I++  I+     W  L S C  HG++ LG+ +  +LL  +   P+ YV+
Sbjct: 833 RAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVM 892

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +SN+Y  AG W E  N REL    G+ K+ G SW+
Sbjct: 893 MSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 927



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 222/450 (49%), Gaps = 26/450 (5%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A +VFD MP+R++  ++A+++G   NG     + LF EM +  +  + ++F++ L  C  
Sbjct: 431 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKAC-- 488

Query: 202 GLL---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH-- 256
           GLL   E G Q+H    K GF  +V V N+L+ MY  CG + +A KVF      + D   
Sbjct: 489 GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRR----IVDRSL 544

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASL--RPSELTFVSVMSACLCPRV---GYQVH 311
           IS+N M+ G    G   +AL  F  M  A++  RP E T  S++ AC    +   G Q+H
Sbjct: 545 ISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIH 604

Query: 312 AQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
              ++SGF   +S  ++ + + +Y  CG +  A   F +++EK ++SW+++I  YAQ   
Sbjct: 605 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 664

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
              A+  +  +Q +  + D F   S++   A    +   + + A            V N+
Sbjct: 665 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 724

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           ++  Y K   + +A + F  M  +++I+W  +I G+  +G   + ++ F E+L   + PD
Sbjct: 725 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD 784

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVF 545
           E      LS+C+    ++ G+++   +L+ + I  ++     ++ L  + G L  +  + 
Sbjct: 785 EVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 844

Query: 546 NMMIEKDTIS-WNALISAYAQHGE---GKE 571
           + M  K  +  W  L+S    HG+   GKE
Sbjct: 845 DTMPIKPNVGIWQTLLSLCRVHGDIELGKE 874



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 212/435 (48%), Gaps = 51/435 (11%)

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
            SN  I MY  C +   A  +F  + E+++VSW+ ++S +      + ++  + EM   G
Sbjct: 414 TSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQG 473

Query: 385 IRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           I P+EFTF + L + G +  +E    IH F    G    ++V N+L+  Y+K  RI +A 
Sbjct: 474 IYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAE 533

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL--RPDEYTLSVALSSCAR 499
           ++F  +  R++I+WN +I GF+  G+  + L  F  +  + +  RPDE+TL+  L +C+ 
Sbjct: 534 KVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSS 593

Query: 500 ISSLRHGKQIHGYVLKNNL--ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
              +  GKQIHG+++++     S  ++  +++ LY KCG L  + + F+ + EK  ISW+
Sbjct: 594 TGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWS 653

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           +LI  YAQ GE  EA+  FK +Q++   + D    ++++   +   L+  G ++    V 
Sbjct: 654 SLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVK 712

Query: 618 DYGFIPA---EDHLSCMLDLLGRAGYLDEAERVINS------------------------ 650
               +P+      L+ ++D+  + G +DEAE+                            
Sbjct: 713 ----LPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKK 768

Query: 651 ----------QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV--YVLLS 698
                      +I+     + A+ SAC+  G ++ G  +   LLE    KP V  Y  + 
Sbjct: 769 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828

Query: 699 NIYAAAGLWEEAANI 713
           ++   AG  +EA ++
Sbjct: 829 DLLGRAGRLKEAKHL 843



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 51/442 (11%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G  + +L LF ++     + P+ ++ ST L AC  L     G Q+H + L+ G +    
Sbjct: 456 NGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 514

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N+++ +Y                               +K G ++ A +VF ++ DR 
Sbjct: 515 VGNSLVDMY-------------------------------SKCGRINEAEKVFRRIVDRS 543

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDV--RRDNYSFASVLSVCDA-GLLEFGRQL 210
           L  +NAMI G    GY    +  F  M + ++  R D ++  S+L  C + G++  G+Q+
Sbjct: 544 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 603

Query: 211 HSLVTKSGFSCLVS--VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           H  + +SGF C  S  +  +L+ +Y  CG +  A K F++ K      IS++ ++ G A 
Sbjct: 604 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM--ISWSSLILGYAQ 661

Query: 269 VGRVEEALIRFRDM--LVASLRPSEL-TFVSVMSACLCPRVGYQVHAQAMK--SGFEAYT 323
            G   EA+  F+ +  L + +    L + + V +     R G Q+ A A+K  SG E  T
Sbjct: 662 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE--T 719

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           SV N+ + MY  CG +DEA   FA +Q KD++SW  +I+ Y +  LG+ ++  + EM   
Sbjct: 720 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 779

Query: 384 GIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            I PDE  + ++L++   SG I E  E+    +  +GI   ++    ++    +  R+K+
Sbjct: 780 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 839

Query: 440 AYQIFHNMSPR-NIITWNTLIN 460
           A  +   M  + N+  W TL++
Sbjct: 840 AKHLIDTMPIKPNVGIWQTLLS 861



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 142/256 (55%), Gaps = 3/256 (1%)

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           N+  SN LI  Y K      AY++F +M  RN+++W+ L++G +LNG     L  FSE+ 
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
              + P+E+T S  L +C  +++L  G QIHG+ LK      + +GN+++ +Y+KCG ++
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 530

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG-RIKPDQATFTAVLSA 598
            + +VF  ++++  ISWNA+I+ +   G G +A+  F  MQ+   + +PD+ T T++L A
Sbjct: 531 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA 590

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAERVINSQHIQARS 657
           CS  G++  G +I   +V      P+   ++  ++DL  + GYL  A +  + Q  +   
Sbjct: 591 CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD-QIKEKTM 649

Query: 658 DNWWALFSACAAHGNL 673
            +W +L    A  G  
Sbjct: 650 ISWSSLILGYAQEGEF 665



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 8/167 (4%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           ++ G + +A+ LF ++   +  + D ++LS+ +   A+      G Q+ A A++      
Sbjct: 660 AQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 718

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
             V N+++ +Y     +   ++ F+E+Q  DV SWT  ++   K G    +  +F +M  
Sbjct: 719 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 778

Query: 150 --PDRDLPVYNAMITGCTENGYEDIGIGLFR---EMHKLDVRRDNYS 191
              + D   Y A+++ C+ +G    G  LF    E H +  R ++Y+
Sbjct: 779 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 825


>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 195/623 (31%), Positives = 327/623 (52%), Gaps = 88/623 (14%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R FS   N    +W   ++   K G +  A +VF++MPDRD+  + A+ITG        I
Sbjct: 58  RDFSANSNVARSNW--LITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGY-------I 108

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
             G+  E   L  R D                     + ++VT +          AL++ 
Sbjct: 109 KCGMIEEAKTLFDRND--------------------AIKNVVTWT----------ALVSG 138

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y     + +A ++F+     V + IS+N M++G A  G +++AL  F  M   ++    +
Sbjct: 139 YVRWNRIEEARRLFDAMP--VKNVISWNTMIEGYARKGWIDQALDLFEKMPERNV----V 192

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQE 351
           ++ +V++A +  R   +  AQ + +       +S    +   S  G+ID+A ++F ++  
Sbjct: 193 SWNTVITAFMQRRRVDE--AQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPV 250

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF 411
           +++VSWNTMI  YAQ                  +R DE       A   F +M E     
Sbjct: 251 RNVVSWNTMIIGYAQ-----------------NMRLDE-------AFKLFEQMPE----- 281

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
                    +   N +I+ + +N ++++A   F+ MS +N++TW  +I+G + +G   + 
Sbjct: 282 -------RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEA 334

Query: 472 LQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
           L+ FSE+  +  ++P+E T    L +C+++++L  G+QIH  + K        + +A+I 
Sbjct: 335 LKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALIN 394

Query: 531 LYAKCGDLDCSLRVFN--MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +Y+KCG+L+ + ++F+   +  +D +SWN +I+AYA HG G +A+S F  MQ +G  +PD
Sbjct: 395 MYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALG-FRPD 453

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             T+ A+LSACSHAGLVD+G ++F+++V D      EDH +C++DL GRAG L EA   I
Sbjct: 454 NVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFI 513

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
               ++  +  W AL + C  HG++ LG++ A  LLE E +    Y++LSNIYA+ G W 
Sbjct: 514 KGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           EAA +R  +K  G+ KQPGCSWI
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWI 596



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 192/400 (48%), Gaps = 24/400 (6%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT++  Y     +     +F ++   +V SW T ++A  +   VD A E+F++MP+RD+ 
Sbjct: 164 NTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVI 223

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +  M+ G ++NG  D    LF +M   +V   N     ++       L+   +L   + 
Sbjct: 224 SWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN---TMIIGYAQNMRLDEAFKLFEQMP 280

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           +   S      N +IT +   G +  A   F +      + +++  ++ G    GR EEA
Sbjct: 281 ERELSSW----NTMITGFIQNGKLERAVDFFYKMSNK--NVVTWTAVISGHVQDGRSEEA 334

Query: 276 LIRFRDMLVA-SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           L  F +M  A +++P+E TFVSV+ AC     LC   G Q+H    K+ ++    V +A 
Sbjct: 335 LKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCE--GQQIHQIISKTVYQEVADVVSAL 392

Query: 330 ITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           I MYS CG+++ A  IF    +  +D+VSWN MI+ YA    G  AI  + EMQ++G RP
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452

Query: 388 DEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           D  T+ +LL++   +G + E +++    V    I         L+  + +  R+++A+  
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512

Query: 444 FHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
              +  + +   W  L+ G  ++G    G     +LL +E
Sbjct: 513 IKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETE 552



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 18/174 (10%)

Query: 34  SGHYQD-----ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           SGH QD     AL +F ++ +++ +KP+  +  + L AC+ L     G Q+H    +   
Sbjct: 323 SGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVY 382

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           +    V + ++++Y    +L   +++F +  I + DV SW   ++A    GH   A  +F
Sbjct: 383 QEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLF 442

Query: 147 DKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
           D+M      PD     Y A+++ C+  G  D G+ LF  +     + +R D+++
Sbjct: 443 DEMQALGFRPDN--VTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT 494


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 198/626 (31%), Positives = 325/626 (51%), Gaps = 42/626 (6%)

Query: 141 YACEVFDKMPDRDLPVYNAMIT-GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           Y C +  K    D   +N++I    T+N      +  F  M    V  +N++F ++L  C
Sbjct: 9   YXCSISHK----DTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 200 DA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            A   L    Q+H+ +T+ G +       AL+  Y  CG+   A +VF+E      D +S
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 259 YNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS------ACL------CPR 305
           +  ++   +S G V+EA   F  M  +     SE   V V+S      AC       C R
Sbjct: 123 WTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMIST 363
            G  VH   +K GF   T + N+ + MYS+C  +  A  +F    ++++D+VSWN++IS 
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 364 YAQRNLGRSAILAYLEMQSVG---IRPDEFTFGSLLASS---GFIEMVEMIHAFVFING- 416
           +        A+  + +M S G   + P+  T  +LL S    G +E    +H ++     
Sbjct: 243 FXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 417 ---IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +  ++ V  AL+  +A+   +  A +IF  +  +N++ W+ +I G+     P + L+
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 474 HFSELLMS------ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
            F ++LM       E++P+  TL   +++C+R+ + R    IH Y +   L     + +A
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 528 MITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +I + AKCGD++   +VF+ M E  +  +SW+++I A   HGEGK A+  F  M+  G  
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR-TGGY 481

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P++ T+ +VLSACSHAGLV+ G   F+SM  DYG  P   H +C++DLLGRAG+LDEA 
Sbjct: 482 EPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAH 541

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            VI +  I+A    W +L +AC  HGN +LG I+   +L  + +    +VLL+N+Y  AG
Sbjct: 542 NVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAG 601

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++   +R  L+R+G+ K PG S+I
Sbjct: 602 RWDDVVRMRVELRRSGLRKIPGQSFI 627



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 253/570 (44%), Gaps = 70/570 (12%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q AL  F ++ + H +  + ++    L ACA LR      Q+HAY  R GL A       
Sbjct: 34  QTALTFFTRMQA-HAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAA------- 85

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV- 156
                                   D +S    + A  K GH  YA +VFD+MP+  + V 
Sbjct: 86  ------------------------DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVV 121

Query: 157 -YNAMITGCTENGYED---IGIGLFREMHKLDVRR----DNYSFASVLSVCDAG----LL 204
            + A+I+  + NG  D      G  R M   D       D  S  +++S C  G     L
Sbjct: 122 SWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCL 181

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G  +H LV K GF     + N+++ MY  C +V  A +VF        D +S+N ++ 
Sbjct: 182 RRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLIS 241

Query: 265 GLASVGRVEEALIRFRDML---VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           G    G  E AL  F DM+    +++ P+ +T ++++ +C    C      VH + + S 
Sbjct: 242 GFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVH-EYISSR 300

Query: 319 FEAY-----TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
             +        V  A + M++ CG +  A  IF  ++ K++V W+ MI+ Y Q +    A
Sbjct: 301 HSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEA 360

Query: 374 ILAYLE------MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVS 424
           +  + +      M  V ++P+  T  S++A+    G      MIH +    G+  + +++
Sbjct: 361 LRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIA 420

Query: 425 NALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +ALI   AK   I+   Q+F  M  S R +++W+++I    ++G   + L+ FSE+    
Sbjct: 421 SALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGG 480

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCS 541
             P+E T    LS+C+    +  GK     + K+  +S      A ++ L  + G LD +
Sbjct: 481 YEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEA 540

Query: 542 LRV-FNMMIEKDTISWNALISAYAQHGEGK 570
             V  NM I+ D   W +L++A   HG  K
Sbjct: 541 HNVILNMPIKADLALWGSLLAACHLHGNCK 570


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/592 (31%), Positives = 297/592 (50%), Gaps = 91/592 (15%)

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S   +L+      G + DA   F+       D + +N MM   A       A+  F  +L
Sbjct: 93  SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152

Query: 284 -VASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC- 336
              SLRP + +F +++SA      L      Q+H   +KSG  A  SVSNA I +Y  C 
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 212

Query: 337 ---------------------------------GKIDEACMIFARLQEKDIVSWNTMIST 363
                                            G ++ A  +F  +  K  V WN MIS 
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272

Query: 364 YAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN 420
           Y Q  +   A   +  M S  +  DEFTF S+L   A++GF    + +H      G I  
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH------GQIIR 326

Query: 421 IQ----------VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG---- 466
           +Q          V+NAL++ Y+K  +I  A +IF  M+ +++++WNT+++G++ +G    
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386

Query: 467 ----FPV-----------------------QGLQHFSELLMSELRPDEYTLSVALSSCAR 499
               F V                         L+ F+++   +++P +YT + A+++C  
Sbjct: 387 AVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGE 446

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           + +L+HG+Q+H ++++    +  S GNA++T+YAKCG ++ +  VF +M   D++SWNA+
Sbjct: 447 LGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAM 506

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ISA  QHG G+EA+  F  M   G I PD+ +F  +L+AC+HAGLVD+G   F+SM  D+
Sbjct: 507 ISALGQHGHGREALELFDQMVAEG-IDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 565

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P EDH + ++DLLGR+G + EA  +I +   +     W A+ S C  +G++  G   
Sbjct: 566 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 625

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L          Y+LLSN Y+AAG W +AA +R+L++  GV K+PGCSWI
Sbjct: 626 ADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWI 677



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 230/492 (46%), Gaps = 53/492 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRN--AAFGNQLHAY 82
           N  ++  +R+     A+ +F  +  S  L+PD YS +  ++A   + N  A    QLH  
Sbjct: 129 NAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCS 188

Query: 83  ALRAGLKAYPHVANTILSLY---KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            L++G  A   V+N +++LY            ++V  E+ + D  +WTT +    + G V
Sbjct: 189 VLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDV 248

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           + A  VF+++  +   V+NAMI+G  ++G       LFR M    V  D ++F SVLS C
Sbjct: 249 NAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSAC 308

Query: 200 -DAGLLEFGRQLHSLVTK--SGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAK---- 250
            +AG    G+ +H  + +    F     + V NAL+T+Y   G +V A ++F+       
Sbjct: 309 ANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDV 368

Query: 251 --------GYV---C--------------DHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                   GY+   C              + +S+ VM+ G    G  E+AL  F  M   
Sbjct: 369 VSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAE 428

Query: 286 SLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
            ++P + T+   ++AC      + G Q+HA  ++ GFEA  S  NA +TMY+ CG +++A
Sbjct: 429 DVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDA 488

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI 402
            ++F  +   D VSWN MIS   Q   GR A+  + +M + GI PD  +F ++L +    
Sbjct: 489 RLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHA 548

Query: 403 EMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERIKQAYQIFHNMS--PRNIIT 454
            +V+    F +   +  +  +S        LI    ++ RI +A  +   M   P   I 
Sbjct: 549 GLVD--EGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSI- 605

Query: 455 WNTLINGFLLNG 466
           W  +++G   NG
Sbjct: 606 WEAILSGCRTNG 617


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 203/717 (28%), Positives = 355/717 (49%), Gaps = 45/717 (6%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ LS+S +  +AL +F ++      + D  S+     A + L +      +H Y +
Sbjct: 169 NAMISGLSQSLNPCEALEMFWRMQME-GFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVV 227

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  +     V+N+++ +Y    D+ S +RVF                             
Sbjct: 228 RRSICGV--VSNSLIDMYCKCGDVHSAQRVF----------------------------- 256

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
             D+M  RD   +  M+ G  +NG    G+ L  +M + +V+ +  +  + L V  +   
Sbjct: 257 --DRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRD 314

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE G+++++   + G    + V   ++ MY  CG +  A ++F   +G   D ++++  +
Sbjct: 315 LEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGR--DLVAWSAFL 372

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
             L   G   E L  F+ M    L+P +     ++S C       +G  +H  A+K+  E
Sbjct: 373 SALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADME 432

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +  S+    ++MY        A  +F R+Q KDIV WNT+I+ + +      A+  +  +
Sbjct: 433 SDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRL 492

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  GI PD  T   L ++   ++ +++   +H  +  +G  ++I V  AL+  YAK   +
Sbjct: 493 QLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSL 552

Query: 438 KQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
               ++F      ++ ++WN +I G+L NG+  + +  F  + +  +RP+  T    L +
Sbjct: 553 CSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPA 612

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
            + +S LR     H  +++   +S   +GN++I +YAKCG L  S + F+ M  KDTISW
Sbjct: 613 VSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISW 672

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           NA++SAYA HG+G+ AV+ F  MQ+   ++ D  ++ +VLSAC H+GL+ +G  IF SM 
Sbjct: 673 NAMLSAYAMHGQGELAVALFSVMQE-SNVRVDSVSYISVLSACRHSGLIQEGWDIFASMC 731

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
             +   P+ +H +CM+DLLG AG  DE   ++N    +  +  W AL +AC  H N+ LG
Sbjct: 732 EKHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLG 791

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
            +    LL+ E   P  +V+LS+IYA  G W +A   R  +   G+ K PG SW+G+
Sbjct: 792 EVAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWVGA 848



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 181/687 (26%), Positives = 331/687 (48%), Gaps = 26/687 (3%)

Query: 44  FVQIHSSHKLK---PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
            +QIH+ H L+   P +   ++ + A +   +      L+   L+ GLK      N +L 
Sbjct: 49  LLQIHT-HFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLK 107

Query: 101 LYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
              +A D      ++ +I       DVY  T+ +    KMG +D A  VFDKMP +D   
Sbjct: 108 ACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVC 167

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVT 215
           +NAMI+G +++      + +F  M       D  S  ++  +V   G +   + +H  V 
Sbjct: 168 WNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVV 227

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           +     +VS  N+LI MY  CG+V  A +VF+     V D +S+  MM G    G   E 
Sbjct: 228 RRSICGVVS--NSLIDMYCKCGDVHSAQRVFDRMG--VRDDVSWATMMAGYVKNGCYFEG 283

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L     M   +++ +++  V+ +      R    G +++  A++ G  +   V+   + M
Sbjct: 284 LQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCM 343

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG++ +A  +F  L+ +D+V+W+  +S   +    R  +  +  MQ  G++PD+   
Sbjct: 344 YAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAIL 403

Query: 393 GSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
             L++    I  +   +++H +     + ++I +   L+S Y + E    A  +F+ M  
Sbjct: 404 SILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQI 463

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           ++I+ WNTLINGF   G P   L+ F+ L +S + PD  T+    S+CA +  L  G  +
Sbjct: 464 KDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCL 523

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQHG 567
           HG + K+   S + +  A++ +YAKCG L CS+    ++ +  KD +SWN +I+ Y  +G
Sbjct: 524 HGGIEKSGFESDIHVKVALMDMYAKCGSL-CSVERLFLLTKHVKDEVSWNVMIAGYLHNG 582

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
              EA+S F+ M+ +  ++P+  TF  +L A S+  ++ +    F + +   GF+     
Sbjct: 583 YSNEAISTFRRMK-LENVRPNLVTFVTILPAVSYLSILREAMA-FHTCIIRMGFLSCTLI 640

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
            + ++D+  + G L  +E+  +       + +W A+ SA A HG   L   +  ++ E  
Sbjct: 641 GNSLIDMYAKCGQLRYSEKCFHEME-NKDTISWNAMLSAYAMHGQGELAVALFSVMQESN 699

Query: 688 QDKPSV-YVLLSNIYAAAGLWEEAANI 713
               SV Y+ + +    +GL +E  +I
Sbjct: 700 VRVDSVSYISVLSACRHSGLIQEGWDI 726



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 48/407 (11%)

Query: 12  GNSNTSKELLLKL--------NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           G    ++EL L L        +  L+ L  +G+ ++ L +F Q+     LKPD   LS  
Sbjct: 348 GELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIF-QVMQYEGLKPDKAILSIL 406

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           ++ C  + N   G  +H YA++A +++   +  T++S+Y           +F+ +Q  D+
Sbjct: 407 VSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDI 466

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMP-DRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
             W T ++  TK G    A E+F+++     LP    M             +GLF     
Sbjct: 467 VVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTM-------------VGLF----- 508

Query: 183 LDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
                      S  ++ D   L+ G  LH  + KSGF   + V  AL+ MY  CG++   
Sbjct: 509 -----------SACAIMDD--LDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSV 555

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC- 301
            ++F   K +V D +S+NVM+ G    G   EA+  FR M + ++RP+ +TFV+++ A  
Sbjct: 556 ERLFLLTK-HVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVS 614

Query: 302 --LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
                R     H   ++ GF + T + N+ I MY+ CG++  +   F  ++ KD +SWN 
Sbjct: 615 YLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNA 674

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
           M+S YA    G  A+  +  MQ   +R D  ++ S+L++   SG I+
Sbjct: 675 MLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQ 721


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/626 (30%), Positives = 320/626 (51%), Gaps = 22/626 (3%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           QNP + S    +     +G ++++ +VF  + D +L ++NA++   T  G  +  + +++
Sbjct: 57  QNPTLSS--KLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQ 114

Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M    +  D  ++  VL  C +   + FGR +H  + K GF     V  AL  MY  C 
Sbjct: 115 QMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECI 174

Query: 238 NVVDACKVFEEAK----GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
              +A ++F++      G+     +     D    + RV      F  M+   L P   T
Sbjct: 175 EFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRV------FGRMIAEQLVPDSFT 228

Query: 294 FVSVM---SACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           F +++   +     ++   VH  A+ S       V+ A +++YS    + +A  +F ++ 
Sbjct: 229 FFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMP 288

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---M 407
           EKD V WN MI+ YA+       +  +  M   GIR D FT   +++S   ++ V+    
Sbjct: 289 EKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQ 348

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
            HA +  NG  + + V N+LI  Y + + +  A +IF+ M+ +++I+W+ +I G++ NG 
Sbjct: 349 THAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQ 408

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
            +  L  FS++    ++ D   +   L +   I +L + K +HGY +K  L S  SL  A
Sbjct: 409 SLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTA 468

Query: 528 MITLYAKCGDLDCSLRVFN--MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           ++  YAKCG ++ + R+F    + +KD I WN++ISA+A HG+  +    +  M+     
Sbjct: 469 LLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMK-CSNS 527

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KPDQ TF  +L+AC ++GLV+ G   F  M   YG  P+++H +CM++LLGRAG + EA 
Sbjct: 528 KPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAG 587

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            ++ +  I+  +  W  L SAC  H   +L    A  L+  E      Y+LLSNIYAAAG
Sbjct: 588 ELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAG 647

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W+  A +R  L+  G+ K PGCSW+
Sbjct: 648 KWDGVAKMRSFLRNKGLKKIPGCSWL 673



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 152/618 (24%), Positives = 281/618 (45%), Gaps = 58/618 (9%)

Query: 24  LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
            N  L NL+R G  +  L ++ Q+  +  + PD  +    L +C++  N  FG  +H Y 
Sbjct: 93  FNAILRNLTRYGESERTLLVYQQM-VAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYL 151

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ G   +  VA  +  +Y+             E +N                     A 
Sbjct: 152 VKLGFDLFDVVATALAEMYEEC----------IEFEN---------------------AH 180

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR---DNYSFASVLSVCD 200
           ++FDK   +DL   +++ T   +N   D G G+FR   ++   +   D+++F ++L    
Sbjct: 181 QLFDKRSVKDLGWPSSLTTEGPQN---DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI- 236

Query: 201 AGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           AGL  ++  + +H +   S  S  + V  A++++Y    ++VDA K+F++      D + 
Sbjct: 237 AGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEK--DRVV 294

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N+M+   A  G+  E L  F+ M  + +R    T + V+S+     C   G Q HA  +
Sbjct: 295 WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHIL 354

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           ++G ++  SV N+ I MY  C  +D AC IF  + +K ++SW+ MI  Y +     +A+ 
Sbjct: 355 RNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALS 414

Query: 376 AYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
            + +M+S GI+ D     ++L +    G +E V+ +H +    G+ +   ++ AL+  YA
Sbjct: 415 LFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYA 474

Query: 433 KNERIKQAYQIF--HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           K   I+ A ++F    +  +++I WN++I+    +G   Q  + ++ +  S  +PD+ T 
Sbjct: 475 KCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTF 534

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDL-DCSLRVFNMM 548
              L++C     +  GK+    + ++          A M+ L  + G + +    V NM 
Sbjct: 535 LGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMP 594

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
           I+ D   W  L+SA   H   K A     A + +  ++P  A    +LS    A    DG
Sbjct: 595 IKPDARVWGPLLSACKMHPGSKLAEF---AAEKLINMEPRNAGNYILLSNIYAAAGKWDG 651

Query: 609 TRIFDSMVNDYGF--IPA 624
                S + + G   IP 
Sbjct: 652 VAKMRSFLRNKGLKKIPG 669


>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/532 (33%), Positives = 283/532 (53%), Gaps = 10/532 (1%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G  +H+ +  +GF   + +   LI  Y   G+V+ A  VF+         +S+  M+ G 
Sbjct: 170 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSV--VSWTAMVSGY 227

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +  GR E+A + F DM    ++ ++ T+ S + AC    C  +G QV     K  F    
Sbjct: 228 SQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENL 287

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V +A +  +S CGK+++A  +F  + E+D+VSWN MI  YA +     +   +  M   
Sbjct: 288 FVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRG 347

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+ PD +T GS+L   A  G + +   IH  +   G  +   V+  LI+AYAKN  ++ A
Sbjct: 348 GLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSA 407

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNG-FPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
             +   M  +++ +   LI G+   G + V  L  F E+    +  D+  L   L+ CA 
Sbjct: 408 KDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICAN 467

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           ++S   G QIH + LK      +++GNA+I +YAK G+++ + R F+ M EK+ ISW +L
Sbjct: 468 LASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSL 527

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           IS YA+HG G  AVS +K M+  G  KP+  TF ++L ACSH GL  +G   F++MVN Y
Sbjct: 528 ISGYAKHGYGHMAVSLYKKMESKG-FKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKY 586

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
              P  +H SCM+DL  R G L+EA  ++    I+  +  W A+  A + +G + LG+  
Sbjct: 587 NIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEA 646

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L   + +    YV+L++IY+AAGLW++A  IR+L++     K  G S+ 
Sbjct: 647 ASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFF 698



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 238/507 (46%), Gaps = 28/507 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++  T  +    K+G V  A  VFD MP+R +  + AM++G ++NG  +    LF +M 
Sbjct: 185 DLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 244

Query: 182 KLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              V+ + +++ S L  C +   L+ G Q+   + K  F   + V +AL+  +  CG + 
Sbjct: 245 HCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKME 304

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA  +F        D +S+N M+ G A  G  +++   FR ML   L P   T  SV+ A
Sbjct: 305 DASYLF--GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRA 362

Query: 301 CLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
                   +  Q+H    + G+ +Y  V+   I  Y+  G +  A  +   + +KD+ S 
Sbjct: 363 SAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSS 422

Query: 358 NTMISTYAQRNL-GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVF 413
             +I+ YA   +    A+  + EM  + I  D+    S+L   A+     +   IHAF  
Sbjct: 423 TALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFAL 482

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
                 ++ + NALI  YAK+  I+ A + F  M  +N+I+W +LI+G+  +G+    + 
Sbjct: 483 KYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVS 542

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLY 532
            + ++     +P++ T    L +C+       G +  +  V K N+  +    + M+ L+
Sbjct: 543 LYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLF 602

Query: 533 AKCGDLDCSLRVFNMM----IEKDTISWNALISAYAQHGE---GKEAVSCFKAMQDVGRI 585
           A+ G L+     +N++    I+ +   W A++ A + +G    GKEA S    MQ     
Sbjct: 603 ARQGLLE---EAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ----- 654

Query: 586 KPDQATFTAVLSAC-SHAGLVDDGTRI 611
            P+ +    VL++  S AGL DD  +I
Sbjct: 655 -PENSVNYVVLASIYSAAGLWDDAWKI 680



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 53/344 (15%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L PD Y+L + L A A        NQ+H    + G  +Y  V   +++ Y     L S K
Sbjct: 349 LVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAK 408

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG-YED 171
            +   +   D++S T                               A+ITG    G Y  
Sbjct: 409 DLRKGMLKKDLFSST-------------------------------ALITGYAHEGIYSV 437

Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNAL 229
             + LF+EM+++++  D+    S+L++C A L  F  G Q+H+   K   S  V++ NAL
Sbjct: 438 DALDLFKEMNQMNIGMDDVILCSMLNIC-ANLASFALGTQIHAFALKYQPSYDVAMGNAL 496

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY   G + DA + F+E +    + IS+  ++ G A  G    A+  ++ M     +P
Sbjct: 497 IDMYAKSGEIEDAKRAFDEMEEK--NVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKP 554

Query: 290 SELTFVSVMSACL--------CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           +++TF+S++ AC         C      V+   +K   E Y+ +    + +++  G ++E
Sbjct: 555 NDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCM----VDLFARQGLLEE 610

Query: 342 ACMIFARLQEKDIVS-WNTMI---STYAQRNLGRSAILAYLEMQ 381
           A  +  ++  K   S W  ++   S Y   +LG+ A      MQ
Sbjct: 611 AYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQ 654



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 85/175 (48%), Gaps = 3/175 (1%)

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C    + + G  IH +++ N   S + L   +I  Y K GD+  +  VF+ M E+  +SW
Sbjct: 161 CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 220

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
            A++S Y+Q+G  ++A   F  M+  G +K +Q T+ + L AC+    +D G ++    +
Sbjct: 221 TAMVSGYSQNGRFEKAFVLFSDMRHCG-VKANQFTYGSALRACTSLRCLDMGIQV-QGCI 278

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
               F+      S ++D   + G +++A  +  +  ++    +W A+    A  G
Sbjct: 279 QKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMIGGYAVQG 332



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 8/160 (5%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           DAL LF +++  +    D+  L + L  CANL + A G Q+HA+AL+        + N +
Sbjct: 438 DALDLFKEMNQMNIGMDDVI-LCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNAL 496

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP--- 155
           + +Y  + ++   KR F E++  +V SWT+ +S   K G+   A  ++ KM  +      
Sbjct: 497 IDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPND 556

Query: 156 -VYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
             + +++  C+  G    G   F  M   + +  R ++YS
Sbjct: 557 VTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYS 596


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 203/683 (29%), Positives = 330/683 (48%), Gaps = 45/683 (6%)

Query: 59  SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
           +++  +++C  L +   G+QL  +AL+ GL+     AN+++ ++                
Sbjct: 162 NIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMF---------------- 205

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
                         C   G ++ AC +F++M +RD   +N++I+   +N   +     F 
Sbjct: 206 ------------GGC---GDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFH 250

Query: 179 EMHKLDVRRDNYSFASVL-SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
            M +L     NY+  S+L S+C +   L++G+ +H L  K G    + + N L+++Y + 
Sbjct: 251 WM-RLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDA 309

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G   DA  +F        D IS+N M+      GR   AL  F +ML      + +TF S
Sbjct: 310 GRSKDAELIFRRMPER--DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTS 367

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            ++ACL P     G  +H   +  G +    + N  IT Y  C K+ EA  +F R+ + D
Sbjct: 368 ALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLD 427

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT-----FGSLLASSGFIEMVEMI 408
            V+WN +I  +A       A+ A+  M+       ++       GS L     I+    I
Sbjct: 428 KVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPI 487

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           HA   + G   +  V ++LI+ YAK   +  +  IF  +  +    WN +I      GF 
Sbjct: 488 HAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFG 547

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
            + L+    +  + +  D++  S ALS  A ++ L  G+Q+HG  +K        + NA 
Sbjct: 548 EEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAA 607

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           + +Y KCG+LD +LR+     ++  +SWN LIS  A+HG+  +A   F  M  +G +KP+
Sbjct: 608 MDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLG-VKPN 666

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             +F  +LSACSH GLVD+G   + SM + YG  P  +H  CM+DLLGR+G L EAE  I
Sbjct: 667 HVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFI 726

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
               I      W +L ++C  + NL LGR  A  LLE +    S YVL SN++A  G WE
Sbjct: 727 TEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWE 786

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +  ++R  +    + K+P  SW+
Sbjct: 787 DVEDVRGQMGAHKIQKKPAHSWV 809



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 183/667 (27%), Positives = 316/667 (47%), Gaps = 55/667 (8%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR-NAAFGNQLHAYA 83
           N  ++   R G Y +A+  F  I     +KP  + +++ + AC      A  G Q H +A
Sbjct: 27  NHMMSGYVRVGSYVEAVLFFRDI-CGIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGFA 85

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ GL            +Y                   DV+  T+F+      G V  A 
Sbjct: 86  IKCGL------------IY-------------------DVFVGTSFVHFYASYGIVSNAQ 114

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           ++F++MPDR++  + +++   ++NG +   I  ++ M    +  +  + A V+S C  G 
Sbjct: 115 KMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC--GF 172

Query: 204 LE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           L     G QL     K G    VS  N+LI M+  CG++ +AC +F E      D IS+N
Sbjct: 173 LMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNER--DTISWN 230

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKS 317
            ++   A     EE+   F  M +     +  T   ++S C      + G  VH  A+K 
Sbjct: 231 SIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKY 290

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
           G E+   + N  +++YS  G+  +A +IF R+ E+D++SWN+M++ Y Q      A+  +
Sbjct: 291 GLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVF 350

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
            EM  +    +  TF S LA+     F    +++H FV + G+   + + N LI+ Y K 
Sbjct: 351 AEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKC 410

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP---DEYTLS 491
            ++ +A ++F  M   + +TWN LI GF  N    + +  F   LM E      D  T+ 
Sbjct: 411 HKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFK--LMREGSTSGVDYITIV 468

Query: 492 VALSSCARISSL-RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
             L SC     L ++G  IH + +         + +++IT+YAKCGDL  S  +F+ ++ 
Sbjct: 469 NILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVF 528

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K +  WNA+I+A A++G G+EA+     M+  G I+ DQ  F+  LS  +   ++++G +
Sbjct: 529 KTSSVWNAIIAANARYGFGEEALKLVVRMRSAG-IEFDQFNFSTALSVAADLAMLEEGQQ 587

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
           +  S +   GF      ++  +D+ G+ G LD+A R++     ++R  +W  L S  A H
Sbjct: 588 LHGSTIK-LGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRL-SWNTLISISARH 645

Query: 671 GNLRLGR 677
           G     +
Sbjct: 646 GQFHKAK 652



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 275/547 (50%), Gaps = 13/547 (2%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           +K G ++YA  VFD+M +R+   +N M++G    G     +  FR++  + ++   +  A
Sbjct: 3   SKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIA 62

Query: 194 SVLSVCDAG--LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
           S+++ C+    + + G Q H    K G    V V  + +  Y + G V +A K+F E   
Sbjct: 63  SLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPD 122

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGY 308
              + +S+  +M   +  G  +E +  ++ M    +  +E     V+S+C   +   +G+
Sbjct: 123 R--NVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           Q+   A+K G E   S +N+ I M+  CG I+EAC IF  + E+D +SWN++IS  AQ  
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNT 240

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSN 425
           L   +   +  M+ V    +  T   LL+  G ++ ++    +H      G+ +NI + N
Sbjct: 241 LHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCN 300

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
            L+S Y+   R K A  IF  M  R++I+WN+++  ++ +G  +  L+ F+E+L  +   
Sbjct: 301 TLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEI 360

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
           +  T + AL++C       +GK +HG+V+   L  ++ +GN +IT Y KC  +  + +VF
Sbjct: 361 NYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVF 420

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGL 604
             M + D ++WNALI  +A + E  EAV+ FK M++      D  T   +L +C +H  L
Sbjct: 421 QRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDL 480

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           +  G  I    V   GF   +   S ++ +  + G L  +  + + Q +   S  W A+ 
Sbjct: 481 IKYGIPIHAHTVVT-GFDLDQHVQSSLITMYAKCGDLHSSSYIFD-QLVFKTSSVWNAII 538

Query: 665 SACAAHG 671
           +A A +G
Sbjct: 539 AANARYG 545



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 220/457 (48%), Gaps = 19/457 (4%)

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQ 313
           S+N MM G   VG   EA++ FRD+    ++PS     S+++AC    +  + G+Q H  
Sbjct: 25  SWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGF 84

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K G      V  + +  Y+S G +  A  +F  + ++++VSW +++ +Y+     +  
Sbjct: 85  AIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEV 144

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFV---FINGIITNIQVSNALISA 430
           I  Y  M+  GI  +E     +++S GF+  + + H  +      G+ T +  +N+LI  
Sbjct: 145 INTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFM 204

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           +     I +A  IF+ M+ R+ I+WN++I+    N    +  ++F  + +     +  TL
Sbjct: 205 FGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTL 264

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           S+ LS C  +  L+ GK +HG  +K  L S + L N ++++Y+  G    +  +F  M E
Sbjct: 265 SILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPE 324

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           +D ISWN++++ Y Q G    A+  F  M  + + + +  TFT+ L+AC       +G +
Sbjct: 325 RDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK-EINYVTFTSALAACLDPEFFTNG-K 382

Query: 611 IFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           I    V   G    +D L   + ++   G+   + EA++V   +  +     W AL    
Sbjct: 383 ILHGFVVVLGL---QDELIIGNTLITFYGKCHKMAEAKKVFQ-RMPKLDKVTWNALIGGF 438

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIYAA 703
           A   N  L   +A   L RE     V Y+ + NI  +
Sbjct: 439 A--NNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 148/277 (53%), Gaps = 15/277 (5%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MYS  G+I+ A ++F R+ E++  SWN M+S Y +      A+L + ++  +GI+P  F 
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 392 FGSL---------LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             SL         +A  GF       H F    G+I ++ V  + +  YA    +  A +
Sbjct: 61  IASLVTACNKSSIMAKEGF-----QFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQK 115

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F+ M  RN+++W +L+  +  NG   + +  +  +    +  +E  +++ +SSC  +  
Sbjct: 116 MFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMD 175

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +  G Q+ G+ LK  L +K+S  N++I ++  CGD++ +  +FN M E+DTISWN++ISA
Sbjct: 176 IILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISA 235

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            AQ+   +E+   F  M+ V   + +  T + +LS C
Sbjct: 236 NAQNTLHEESFRYFHWMRLVHE-EINYTTLSILLSIC 271



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +R G  ++AL L V++ S+  ++ D ++ ST L+  A+L     G QLH   +
Sbjct: 535 NAIIAANARYGFGEEALKLVVRMRSA-GIEFDQFNFSTALSVAADLAMLEEGQQLHGSTI 593

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G +    + N  + +Y    +L    R+  +  +    SW T +S   + G    A E
Sbjct: 594 KLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKE 653

Query: 145 VFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREM 180
            F  M    +      +  +++ C+  G  D G+  +  M
Sbjct: 654 TFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASM 693


>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 166/511 (32%), Positives = 281/511 (54%), Gaps = 9/511 (1%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           N +++ YF  G V +A K+F+      C   S+N+++ G     ++ E L  F  M  +S
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCH--SWNIVLSGCVKNHKLGEGLTHFMKMRCSS 142

Query: 287 LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +RP   T+  ++  C     G QVHA  +K   +    +    + MY+  G+I +A  +F
Sbjct: 143 VRPDNFTYAIIIPCCDLG-FGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             +  + +V+WN MIS Y++   G  +I  + ++   GI  DE+T+  +L   A+   + 
Sbjct: 202 DGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVF 261

Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
               +H+ +   G  ++   +NAL++ Y+K   +  A ++F  +  +++++W  +I GFL
Sbjct: 262 EAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFL 321

Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI-SKM 522
            +G   + +  F ++ + ++ P+ +T    L +CA  ++ + G+  HG VLK  L+ + +
Sbjct: 322 QSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADV 381

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +G+A++ +Y+KCG++  +LR F  M E+D  SWN +I  YAQ+G G +A+  +  M  +
Sbjct: 382 VVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLL 441

Query: 583 GR--IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
           G   I P++ TF  VL ACSH GL+ +G   F  MV+ +   P  +H +CM+DLLGRAG 
Sbjct: 442 GPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGL 501

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L EAE +I +  I+  +  W AL  AC  HG++++ R  A  L   E    S YVLL+N 
Sbjct: 502 LQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANS 561

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           Y   G W EA  IRE+++  GV K  GCSW+
Sbjct: 562 YTDIGEWGEAVEIREVMEARGVEKTAGCSWV 592



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 248/504 (49%), Gaps = 21/504 (4%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA  ++ GL A+ +  N +L  Y N++ L    ++   +  P V S+ T LS   K G 
Sbjct: 37  LHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSGYFKFGL 96

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           V  A ++FD    RD   +N +++GC +N     G+  F +M    VR DN+++A ++  
Sbjct: 97  VSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPC 156

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDH 256
           CD G   FG+Q+H+ + K        +   L+ MY   G + DA KVF+   ++G V   
Sbjct: 157 CDLG---FGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLV--- 210

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM---SACLCPRVGYQVHAQ 313
            ++N M+   +  GR ++++  FR +    +   E T+  V+   +A        QVH+ 
Sbjct: 211 -TWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSL 269

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
            ++ GF +    +NA + +YS CG +  A  +F  + ++D+VSW  +I  + Q      A
Sbjct: 270 IIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEA 329

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGII-TNIQVSNALIS 429
           +  + +MQ   I P+ FTFG LL   A +   +     H  V   G++  ++ V +A++ 
Sbjct: 330 MWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVD 389

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM---SELRPD 486
            Y+K   +  A + F  M  R+I +WN +I G+  NG  ++ L+ ++E+++   S + P+
Sbjct: 390 MYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPN 449

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDL-DCSLRV 544
           E T    L +C+    L+ G      ++  +LI   +     M+ L  + G L +    +
Sbjct: 450 EVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALI 509

Query: 545 FNMMIEKDTISWNALISAYAQHGE 568
             + I+ D + W AL+ A   HG+
Sbjct: 510 LALPIKPDNVMWGALLGACKLHGD 533



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 184/394 (46%), Gaps = 47/394 (11%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
            TSK      NI L+   ++    + L  F+++  S  ++PD ++ +  +  C    +  
Sbjct: 106 GTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCS-SVRPDNFTYAIIIPCC----DLG 160

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
           FG Q+HA                         D+V V        + D +  T  L    
Sbjct: 161 FGQQVHA-------------------------DIVKV------CSDLDAFIGTNLLRMYA 189

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           ++G +  A +VFD MP R L  +NAMI+  ++ G  D  IGLFR++ +  +  D Y++A 
Sbjct: 190 EVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAI 249

Query: 195 VLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL+   A    F   Q+HSL+ + GF       NAL+ +Y  CG V  A ++FEE     
Sbjct: 250 VLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQ- 308

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
            D +S+ V++ G    G +EEA+  F  M +  + P+  TF  ++ AC      + G   
Sbjct: 309 -DVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHF 367

Query: 311 HAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           H   +K G   A   V +A + MYS CG++ +A   F  + E+DI SWN +I  YAQ   
Sbjct: 368 HGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGA 427

Query: 370 GRSAILAYLEM---QSVGIRPDEFTF-GSLLASS 399
           G  A+  Y EM      GI P+E TF G L A S
Sbjct: 428 GMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACS 461



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 139/285 (48%), Gaps = 37/285 (12%)

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
           L S G +    ++HA +  NG+I ++   N L+ AY  ++ +  A+++ H M   +++++
Sbjct: 25  LYSHGHMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSY 84

Query: 456 NTLINGFLLNGFPV-------------------------------QGLQHFSELLMSELR 484
           NT+++G+   G                                  +GL HF ++  S +R
Sbjct: 85  NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           PD +T ++ +  C     L  G+Q+H  ++K        +G  ++ +YA+ G++  + +V
Sbjct: 145 PDNFTYAIIIPCC----DLGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKV 200

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F+ M  +  ++WNA+IS Y+++G G +++  F+ +   G I  D+ T+  VL+  +    
Sbjct: 201 FDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREG-ISADEYTYAIVLNEFAARWQ 259

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
           V +  ++  S++ + GF       + +++L  + GY+  A R+  
Sbjct: 260 VFEAMQV-HSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFE 303



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/394 (23%), Positives = 163/394 (41%), Gaps = 73/394 (18%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S+ G    ++ LF Q+     +  D Y+ +  L   A         Q+H
Sbjct: 209 LVTWNAMISCYSKYGRGDKSIGLFRQL-XREGISADEYTYAIVLNEFAARWQVFEAMQVH 267

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  +  G  +     N +++LY     + S  R+F EI + DV SWT             
Sbjct: 268 SLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTV------------ 315

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                              +I G  ++G+ +  + LF +M   D+  ++++F  +L  C 
Sbjct: 316 -------------------IIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACA 356

Query: 200 DAGLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           DA   + GR  H LV K G     V V +A++ MY  CG + DA + F+E      D  S
Sbjct: 357 DANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPER--DIAS 414

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLV---ASLRPSELTFVSVMSACLCPRVGYQVHAQAM 315
           +N ++ G A  G   +AL  + +M++   + + P+E+TFV V+ AC         H   +
Sbjct: 415 WNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCAC--------SHNGLL 466

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G+  +                     M+   L +     +  M+       LGR+ +L
Sbjct: 467 KEGYSYFKE-------------------MVDKHLIKPTAEHYTCMVDL-----LGRAGLL 502

Query: 376 AYLE--MQSVGIRPDEFTFGSLLASSGFIEMVEM 407
              E  + ++ I+PD   +G+LL +      V+M
Sbjct: 503 QEAEALILALPIKPDNVMWGALLGACKLHGDVQM 536


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 175/512 (34%), Positives = 271/512 (52%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ +C   +    G Q+H   +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 161

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--------------------------- 348
           K G++    V  + I++Y   G++++A  +F R                           
Sbjct: 162 KLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQK 221

Query: 349 ----LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
               +  KD+VSWN MIS YA+    + A+  + EM    IRPDE T  +++   A SG 
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +N+++ N+L+  Y+K   ++ A  +F  +  +++I+WNTLI G
Sbjct: 282 IELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGG 341

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S  RP++ T+   L +CA + ++  G+ IH Y+ K   +  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSAT 401

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VFN ++ K   SWNA+I  +A HG    A   F  M
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRM 461

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           + +G I+PD  TF  +LSACS +G++D G  IF +M  DY   P  +H  CM+DLLG +G
Sbjct: 462 RKIG-IEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSG 520

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +IN+  ++     W +L  AC   GN+ LG   A  L++ E + P  YVLLSN
Sbjct: 521 LFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSN 580

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E A IR LL   G+ K PGCS I
Sbjct: 581 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 612



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 173/637 (27%), Positives = 297/637 (46%), Gaps = 83/637 (13%)

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDV----YSWTTFLSACTKMGHVD---YACEVFDKMPD 151
           LSL  N + L S++ + +++    +    Y+ +  L  C    H D   YA  VF+ + +
Sbjct: 37  LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
            +L ++N M  G   +      + L+  M  L +  ++Y+F  +L  C  +   + G+Q+
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA------------KGY------ 252
           H  V K G+   + V  +LI++Y   G + DA KVF+ +            KGY      
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216

Query: 253 -----------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                      V D +S+N M+ G A  G  +EAL  F++M+  ++RP E T V+V+SAC
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276

Query: 302 L---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                  +G QVH+     GF +   + N+ + +YS CG+++ AC +F  L  KD++SWN
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWN 336

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFV--F 413
           T+I  Y   NL + A+L + EM   G RP++ T  S+L   A  G I++   IH ++   
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +        +  +LI  YAK   I+ A+Q+F+++  +++ +WN +I GF ++G       
Sbjct: 397 LKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFD 456

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLY 532
            FS +    + PD+ T    LS+C+R   L  G+ I   + ++  I+ K+     MI L 
Sbjct: 457 IFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLL 516

Query: 533 AKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
              G   +    + NM +E D + W +L+ A    G  +   S     Q++ +I+P+   
Sbjct: 517 GHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGES---FAQNLIKIEPENPG 573

Query: 592 FTAVLS------------ACSHAGLVDDGTRI--------FDSMVNDY----GFIPAEDH 627
              +LS            A   A L D G +          DS+V+++     F P    
Sbjct: 574 CYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633

Query: 628 LSCMLD----LLGRAGYLDEAERVINSQHIQARSDNW 660
           +  ML+    LL +AG++ +   V     +Q   + W
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEV-----LQEMEEEW 665



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 230/440 (52%), Gaps = 18/440 (4%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ Y+    L +CA  +    G Q+H + L+ G      V  +++
Sbjct: 118 ALKLYVCM-ISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLI 176

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L   ++VF    + DV S+T  +      G+++ A ++FD++P +D+  +NA
Sbjct: 177 SVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNA 236

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF+EM K ++R D  +  +V+S C  +G +E GRQ+HS +   G
Sbjct: 237 MISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHG 296

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VN+L+ +Y  CG +  AC +FE       D IS+N ++ G   +   +EAL+ 
Sbjct: 297 FGSNLKIVNSLMDLYSKCGELETACGLFEGL--LYKDVISWNTLIGGYTHMNLYKEALLL 354

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHA---QAMKSGFEAYTSVSNAAITM 332
           F++ML +  RP+++T +S++ AC       +G  +H    + +KS   A +S+  + I M
Sbjct: 355 FQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNA-SSLRTSLIDM 413

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG I+ A  +F  +  K + SWN MI  +A      +A   +  M+ +GI PD+ TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF 473

Query: 393 GSLLAS---SGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHN-- 446
             LL++   SG +++   I   +  +  IT  ++    +I     +   K+A ++ +N  
Sbjct: 474 VGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME 533

Query: 447 MSPRNIITWNTLINGFLLNG 466
           M P  +I W +L+    + G
Sbjct: 534 MEPDGVI-WCSLLKACKIRG 552



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 196/407 (48%), Gaps = 54/407 (13%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE---ACMIFARLQEKDIVSWNTMISTYAQ 366
           +HAQ +K+G        +  + +       D    A  +F  +QE +++ WNTM   +A 
Sbjct: 52  IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
            +   SA+  Y+ M S+G+ P+ +TF  LL   A S   +  + IH  V   G   ++ V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171

Query: 424 SNALISAYAKNERIKQAYQIFHNMSP--------------------------------RN 451
             +LIS Y +N R++ A ++F + SP                                ++
Sbjct: 172 HTSLISVYVQNGRLEDARKVF-DRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKD 230

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
           +++WN +I+G+   G   + L+ F E++ + +RPDE T+   +S+CA+  S+  G+Q+H 
Sbjct: 231 VVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHS 290

Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
           ++  +   S + + N+++ LY+KCG+L+ +  +F  ++ KD ISWN LI  Y      KE
Sbjct: 291 WIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKE 350

Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI-------FDSMVNDYGFIPA 624
           A+  F+ M   G  +P+  T  ++L AC+H G +D G  I         S  N      A
Sbjct: 351 ALLLFQEMLRSGE-RPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATN------A 403

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
               + ++D+  + G ++ A +V NS  +     +W A+    A HG
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHG 449


>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 195/623 (31%), Positives = 327/623 (52%), Gaps = 88/623 (14%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R FS   N    +W   ++   K G +  A +VF++MPDRD+  + A+ITG        I
Sbjct: 58  RDFSANSNVARSNW--LITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGY-------I 108

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
             G+  E   L  R D                     + ++VT +          AL++ 
Sbjct: 109 KCGMIEEAKTLFDRND--------------------AIKNVVTWT----------ALVSG 138

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y     + +A ++F+     V + IS+N M++G A  G +++AL  F  M   ++    +
Sbjct: 139 YVRWNRIEEARRLFDAMP--VKNVISWNTMIEGYARKGWIDQALDLFEXMPERNV----V 192

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQE 351
           ++ +V++A +  R   +  AQ + +       +S    +   S  G+ID+A ++F ++  
Sbjct: 193 SWNTVITAFMQRRRVDE--AQELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPV 250

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF 411
           +++VSWNTMI  YAQ                  +R DE       A   F +M E     
Sbjct: 251 RNVVSWNTMIIGYAQ-----------------NMRLDE-------AFKLFEQMPE----- 281

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
                    +   N +I+ + +N ++++A   F+ MS +N++TW  +I+G + +G   + 
Sbjct: 282 -------RELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEA 334

Query: 472 LQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
           L+ FSE+  +  ++P+E T    L +C+++++L  G+QIH  + K        + +A+I 
Sbjct: 335 LKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALIN 394

Query: 531 LYAKCGDLDCSLRVFN--MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +Y+KCG+L+ + ++F+   +  +D +SWN +I+AYA HG G +A+S F  MQ +G  +PD
Sbjct: 395 MYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALG-FRPD 453

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             T+ A+LSACSHAGLVD+G ++F+++V D      EDH +C++DL GRAG L EA   I
Sbjct: 454 NVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFI 513

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
               ++  +  W AL + C  HG++ LG++ A  LLE E +    Y++LSNIYA+ G W 
Sbjct: 514 KGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWR 573

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           EAA +R  +K  G+ KQPGCSWI
Sbjct: 574 EAAGVRMKMKDKGLKKQPGCSWI 596



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 191/400 (47%), Gaps = 24/400 (6%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT++  Y     +     +F  +   +V SW T ++A  +   VD A E+F++MP+RD+ 
Sbjct: 164 NTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVI 223

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +  M+ G ++NG  D    LF +M   +V   N     ++       L+   +L   + 
Sbjct: 224 SWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWN---TMIIGYAQNMRLDEAFKLFEQMP 280

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           +   S      N +IT +   G +  A   F +      + +++  ++ G    GR EEA
Sbjct: 281 ERELSSW----NTMITGFIQNGKLERAVDFFYKMSNK--NVVTWTAVISGHVQDGRSEEA 334

Query: 276 LIRFRDMLVA-SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           L  F +M  A +++P+E TFVSV+ AC     LC   G Q+H    K+ ++    V +A 
Sbjct: 335 LKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCE--GQQIHQIISKTVYQEVADVVSAL 392

Query: 330 ITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           I MYS CG+++ A  IF    +  +D+VSWN MI+ YA    G  AI  + EMQ++G RP
Sbjct: 393 INMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRP 452

Query: 388 DEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           D  T+ +LL++   +G + E +++    V    I         L+  + +  R+++A+  
Sbjct: 453 DNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDF 512

Query: 444 FHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
              +  + +   W  L+ G  ++G    G     +LL +E
Sbjct: 513 IKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETE 552



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 18/174 (10%)

Query: 34  SGHYQD-----ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           SGH QD     AL +F ++ +++ +KP+  +  + L AC+ L     G Q+H    +   
Sbjct: 323 SGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVY 382

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           +    V + ++++Y    +L   +++F +  I + DV SW   ++A    GH   A  +F
Sbjct: 383 QEVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLF 442

Query: 147 DKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYS 191
           D+M      PD     Y A+++ C+  G  D G+ LF  +     + +R D+++
Sbjct: 443 DEMQALGFRPDN--VTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFT 494


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 198/626 (31%), Positives = 325/626 (51%), Gaps = 42/626 (6%)

Query: 141 YACEVFDKMPDRDLPVYNAMIT-GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           Y C +  K    D   +N++I    T+N      +  F  M    V  +N++F ++L  C
Sbjct: 9   YHCSISHK----DTFHWNSLIAKNATQN--PQTALTFFTRMQAHAVPSNNFTFPALLKAC 62

Query: 200 DA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            A   L    Q+H+ +T+ G +       AL+  Y  CG+   A +VF+E      D +S
Sbjct: 63  AALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVS 122

Query: 259 YNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS------ACL------CPR 305
           +  ++   +S G V+EA   F  M  +     SE   V V+S      AC       C R
Sbjct: 123 WTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLR 182

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF--ARLQEKDIVSWNTMIST 363
            G  VH   +K GF   T + N+ + MYS+C  +  A  +F    ++++D+VSWN++IS 
Sbjct: 183 RGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISG 242

Query: 364 YAQRNLGRSAILAYLEMQSVG---IRPDEFTFGSLLASS---GFIEMVEMIHAFVFING- 416
           +        A+  + +M S G   + P+  T  +LL S    G +E    +H ++     
Sbjct: 243 FTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHS 302

Query: 417 ---IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
              +  ++ V  AL+  +A+   +  A +IF  +  +N++ W+ +I G+     P + L+
Sbjct: 303 SLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALR 362

Query: 474 HFSELLMS------ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
            F ++LM       E++P+  TL   +++C+R+ + R    IH Y +   L     + +A
Sbjct: 363 LFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASA 422

Query: 528 MITLYAKCGDLDCSLRVFNMMIE--KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           +I + AKCGD++   +VF+ M E  +  +SW+++I A   HGEGK A+  F  M+  G  
Sbjct: 423 LIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMR-TGGY 481

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P++ T+ +VLSACSHAGLV+ G   F+SM  DYG  P   H +C++DLLGRAG+LDEA 
Sbjct: 482 EPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAH 541

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
            VI +  I+A    W +L +AC  HGN +LG I+   +L  + +    +VLL+N+Y  AG
Sbjct: 542 NVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAG 601

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++   +R  L+R+G+ K PG S+I
Sbjct: 602 RWDDVVRMRVELRRSGLRKIPGQSFI 627



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 250/569 (43%), Gaps = 68/569 (11%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           Q AL  F ++ + H +  + ++    L ACA LR      Q+HAY  R GL A       
Sbjct: 34  QTALTFFTRMQA-HAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAA------- 85

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV- 156
                                   D +S    + A  K GH  YA +VFD+MP+  + V 
Sbjct: 86  ------------------------DRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVV 121

Query: 157 -YNAMITGCTENGYED---IGIGLFREMHKLDVRR----DNYSFASVLSVCDAG----LL 204
            + A+I+  + NG  D      G  R M   D       D  S  +++S C  G     L
Sbjct: 122 SWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCL 181

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             G  +H LV K GF     + N+++ MY  C +V  A +VF        D +S+N ++ 
Sbjct: 182 RRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLIS 241

Query: 265 GLASVGRVEEALIRFRDML---VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           G    G  E AL  F DM+    +++ P+ +T ++++ +C    C      VH       
Sbjct: 242 GFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRH 301

Query: 319 FEAYTS----VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
                +    V  A + M++ CG +  A  IF  ++ K++V W+ MI+ Y Q +    A+
Sbjct: 302 SSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEAL 361

Query: 375 LAYLE------MQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSN 425
             + +      M  V ++P+  T  S++A+    G      MIH +    G+  + ++++
Sbjct: 362 RLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIAS 421

Query: 426 ALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           ALI   AK   I+   Q+F  M  S R +++W+++I    ++G   + L+ FSE+     
Sbjct: 422 ALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGY 481

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSL 542
            P+E T    LS+C+    +  GK     + K+  +S      A ++ L  + G LD + 
Sbjct: 482 EPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAH 541

Query: 543 RV-FNMMIEKDTISWNALISAYAQHGEGK 570
            V  NM I+ D   W +L++A   HG  K
Sbjct: 542 NVILNMPIKADLALWGSLLAACHLHGNCK 570


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/565 (32%), Positives = 298/565 (52%), Gaps = 44/565 (7%)

Query: 208 RQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDG 265
           +QLH+ + ++G F    S          +  + +D ACKVF++      +  ++N ++  
Sbjct: 47  KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPR--PNLYTWNTLIRA 104

Query: 266 LASVGRVEEALIRFRDMLVASLR-PSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
            AS  +  + L+ F  ML  S R P+  TF  V+ A         G  +H   MK+ F +
Sbjct: 105 FASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGS 164

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              +SN+ I  YSS G +D A ++F+++ EKDIVSWN+MIS + Q      A+  +  M+
Sbjct: 165 DLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMK 224

Query: 382 SVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               RP+  T   +L++      +E       ++  NGI  N+ +SNA++  Y K   ++
Sbjct: 225 MENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLE 284

Query: 439 QAYQIFHNMSPRNIITWNTLINGFL-------------------------------LNGF 467
            A ++F  M  ++I++W T+I+G+                                 NG 
Sbjct: 285 DARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGK 344

Query: 468 PVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           P + L  F EL +++  +P+E TL+  L++CA++ ++  G  IH Y+ K  +     +  
Sbjct: 345 PKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITT 404

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++I +Y+KCG L+ +L VF  +  +D   W+A+I+  A HG G+ A+  F  MQ+  ++K
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQET-KVK 463

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P+  TFT +L ACSH+GLVD+G   F+ M   YG +P   H +CM+D+LGRAG L+EA  
Sbjct: 464 PNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
           +I    I   +  W AL  AC  +GN+ L  +    LLE + +    YVLLSNIYA AG 
Sbjct: 524 LIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGK 583

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W+  + +R+ +K +G+ K+PGCS I
Sbjct: 584 WDCVSRLRQHMKVSGLEKEPGCSSI 608



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 140/570 (24%), Positives = 263/570 (46%), Gaps = 94/570 (16%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           ++++ K +  ++   +  CAN ++     QLHA+ LR GL   P  A             
Sbjct: 22  ANNEQKSNPSTVPILIDKCANKKHL---KQLHAHMLRTGLFFDPPSA------------- 65

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSAC--TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTE 166
                             T   +AC  +    +DYAC+VFD++P  +L  +N +I     
Sbjct: 66  ------------------TKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFAS 107

Query: 167 NGYEDIGIGLFREM-HKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVS 224
           +     G+ +F +M H+     ++Y+F  V+ +  +   L  G+ +H +V K+ F   + 
Sbjct: 108 SPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLF 167

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           + N+LI  Y + G++  A  VF  +K    D +S+N M+ G    G  EEAL  F+ M +
Sbjct: 168 ISNSLIHFYSSLGDLDSAYLVF--SKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225

Query: 285 ASLRPSELTFVSVMSACLCPRVGYQVHAQAM----KSGFEAYTSVSNAAITMYSSCGKID 340
            + RP+ +T V V+SAC   R+  +    A     ++G +    +SNA + MY  CG ++
Sbjct: 226 ENARPNRVTMVGVLSAC-AKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLE 284

Query: 341 EACMIFARLQEKDIVSWNTM-------------------------------ISTYAQRNL 369
           +A  +F +++EKDIVSW TM                               IS+Y Q   
Sbjct: 285 DARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGK 344

Query: 370 GRSAILAYLEMQ-SVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSN 425
            + A+  + E+Q +   +P+E T  S LA+    G +++   IH ++   GI  N  ++ 
Sbjct: 345 PKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITT 404

Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           +LI  Y+K   +++A ++F+++  R++  W+ +I G  ++G     +  FS++  ++++P
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKP 464

Query: 486 DEYTLSVALSSCARISSLRHG-------KQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           +  T +  L +C+    +  G       + ++G V  +   +       M+ +  + G L
Sbjct: 465 NAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYA------CMVDILGRAGCL 518

Query: 539 DCSLRVFNMM-IEKDTISWNALISAYAQHG 567
           + ++ +   M I      W AL+ A   +G
Sbjct: 519 EEAVELIEKMPIVPSASVWGALLGACRIYG 548



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 126/553 (22%), Positives = 233/553 (42%), Gaps = 116/553 (20%)

Query: 40  ALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
            L +F+Q +H S +  P+ Y+    + A   + +   G  +H   ++A   +   ++N++
Sbjct: 114 GLLVFIQMLHESQRF-PNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSL 172

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +  Y +  DL S   VFS+I   D+ SW + +S                           
Sbjct: 173 IHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMIS--------------------------- 205

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKS 217
               G  + G  +  + LF+ M   + R +  +   VLS C   + LEFGR     + ++
Sbjct: 206 ----GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERN 261

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV-------- 269
           G    + + NA++ MY  CG++ DA ++F++ +    D +S+  M+DG A V        
Sbjct: 262 GIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEK--DIVSWTTMIDGYAKVGDYDAARR 319

Query: 270 -----------------------GRVEEALIRFRDM-LVASLRPSELTFVSVMSACL--- 302
                                  G+ +EAL  FR++ L  + +P+E+T  S ++AC    
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G  +H    K G +    ++ + I MYS CG +++A  +F  ++ +D+  W+ MI+
Sbjct: 380 AMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIA 439

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFIN------G 416
             A    GR+AI  + +MQ   ++P+  TF +LL +     +V+     +F N      G
Sbjct: 440 GLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVD--EGRLFFNQMRPVYG 497

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           ++   +    ++    +   +++A ++   M     I  +  + G LL    + G    +
Sbjct: 498 VVPGSKHYACMVDILGRAGCLEEAVELIEKMP----IVPSASVWGALLGACRIYGNVELA 553

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG-YVLKNNLISKMSLGNAMITLYAKC 535
           E+                 +C+R+  L      HG YVL +N             +YAK 
Sbjct: 554 EM-----------------ACSRL--LETDSNNHGAYVLLSN-------------IYAKA 581

Query: 536 GDLDCSLRVFNMM 548
           G  DC  R+   M
Sbjct: 582 GKWDCVSRLRQHM 594



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 140/283 (49%), Gaps = 5/283 (1%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  ++   + G  ++AL LF ++   +  +P+  ++   L+ACA   +  FG    
Sbjct: 197 IVSWNSMISGFVQGGSPEEALQLFKRMKMENA-RPNRVTMVGVLSACAKRIDLEFGRWAC 255

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y  R G+     ++N +L +Y     L   +R+F +++  D+ SWTT +    K+G  D
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH-KLDVRRDNYSFASVLSVC 199
            A  VFD MP  D+  +NA+I+   +NG     + +FRE+    + + +  + AS L+ C
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375

Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
              G ++ G  +H  + K G      +  +LI MY  CG++  A +VF   +    D   
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERR--DVFV 433

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           ++ M+ GLA  G    A+  F  M    ++P+ +TF +++ AC
Sbjct: 434 WSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCAC 476



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 4/170 (2%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           +E +   N  +++  ++G  ++AL +F ++  +   KP+  +L++TLAACA L     G 
Sbjct: 326 REDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGG 385

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H Y  + G+K   H+  +++ +Y     L     VF  ++  DV+ W+  ++     G
Sbjct: 386 WIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHG 445

Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKL 183
           H   A ++F KM +  +      +  ++  C+ +G  D G   F +M  +
Sbjct: 446 HGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495


>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/553 (32%), Positives = 297/553 (53%), Gaps = 16/553 (2%)

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           + F+ +L  C DAG L  G  +H+ + K   +  + + N L+++Y   G++  A ++F+ 
Sbjct: 60  HQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDT 119

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIR---FRDMLVASLRPSELTFVSVMSAC---L 302
                 D +S+N M+   ASV    +AL     +  M    ++P+ +TF  ++ AC   +
Sbjct: 120 MPRR--DVVSFNTMIS--ASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLI 175

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
             R+    HA  ++ G  +   V ++ +  Y+   K+++A   F  + E D+VSWN MI 
Sbjct: 176 ALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMID 235

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIIT 419
             A+ N    A+  + +M    +R D FT  S++ +    G ++     H      G+  
Sbjct: 236 GCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAH 295

Query: 420 NIQVSNALISAYAKNER-IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
              + NALI+ Y+K E+ +    +IF ++S  NII+W  +I+GF+ N    + +  F E+
Sbjct: 296 ETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEM 355

Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
           L   +R ++++ S  L     +++L  GKQIH  ++K+     +S+ NA+I +Y+KCG L
Sbjct: 356 LRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSL 415

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           + +  VF  M + D +S   +I +Y QHG+GKEA+     M+  G + PD  TF   L A
Sbjct: 416 EDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEGLV-PDGVTFLGCLYA 474

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSH GLV++G R+F  M+ D+   P  +H +C++D+LGRAG L+EAE  I+   I++   
Sbjct: 475 CSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEAENFIDEMGIESDVL 534

Query: 659 NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
            W  L  AC  HG + LG   A  ++E +  +   YVLL+NIYA  G WE+   +RE L 
Sbjct: 535 VWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAERGSWEDKVMVREKLV 594

Query: 719 RTGVIKQPGCSWI 731
             G+ KQ GCSW+
Sbjct: 595 SHGLKKQVGCSWV 607



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 140/481 (29%), Positives = 236/481 (49%), Gaps = 16/481 (3%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG-IGLFR 178
           N  +  W   LS   K GH+ +A ++FD MP RD+  +N MI+    N Y+ +  +GL+ 
Sbjct: 91  NGFILIWNKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYS 150

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M K DV+ ++ +FA ++  CD  + L      H+   + G S    V ++L+  Y    
Sbjct: 151 KMKKEDVKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQM 210

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
            + DA K F E      D +S+N+M+DG A     E A+  F  ML  ++R    T  S+
Sbjct: 211 KLEDAIKAFNEI--MELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSI 268

Query: 298 MSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK-IDEACMIFARLQEKD 353
           +  C  P   + G Q H  A+K G    T + NA ITMYS C K +     IF  + E +
Sbjct: 269 IKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPN 328

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHA 410
           I+SW  MIS + Q      AI  + EM  +G+R ++F+F S+L   G    +E  + IHA
Sbjct: 329 IISWTAMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHA 388

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +  +    ++ V+NALI  Y+K   ++ A+ +F  M   ++++  T+I  +  +G   +
Sbjct: 389 RIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKE 448

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMI 529
            L+  +E+    L PD  T    L +C+    +  G ++   ++++ NL  K      ++
Sbjct: 449 ALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVV 508

Query: 530 TLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
            +  + G L+ +    + M IE D + W  L+ A   HG   E V   K+ Q +  ++P 
Sbjct: 509 DMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHG---EMVLGEKSAQKIMELQPG 565

Query: 589 Q 589
           +
Sbjct: 566 R 566



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 52/375 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  NI +   +R+   + A+ +F Q+   + ++ D ++L++ +  C+   +   G Q H
Sbjct: 227 LVSWNIMIDGCARNNSKEHAVRMFSQMLKGN-VRVDGFTLTSIIKTCSKPGDLKHGMQFH 285

Query: 81  AYALRAGLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
             A++ GL     + N ++++Y K  + + S  ++F  I  P++ SWT            
Sbjct: 286 GSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWT------------ 333

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV- 198
                              AMI+G  +N   +  IGLF+EM +L VR +++SF+S+L V 
Sbjct: 334 -------------------AMISGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVY 374

Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            +   LE G+Q+H+ + KS F   +SV NALI MY  CG++ DA  VF +   +  D +S
Sbjct: 375 GNLANLEQGKQIHARIIKSWFGLDLSVNNALIDMYSKCGSLEDAHLVFMKMGKH--DVVS 432

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRV-GYQV 310
              M+      G+ +EAL    +M    L P  +TF+  + AC          RV    +
Sbjct: 433 CTTMIMSYGQHGKGKEALEILAEMKSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMI 492

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQ 366
               +K   E +  V    + M    G+++EA      +  E D++ W T++     + +
Sbjct: 493 EDHNLKPKREHFACV----VDMLGRAGRLNEAENFIDEMGIESDVLVWETLLGACRVHGE 548

Query: 367 RNLGRSAILAYLEMQ 381
             LG  +    +E+Q
Sbjct: 549 MVLGEKSAQKIMELQ 563


>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
          Length = 562

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/534 (33%), Positives = 294/534 (55%), Gaps = 12/534 (2%)

Query: 207 GRQLH--SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           G+ +H  +++T S     + +   L+  Y + G+V  A +VF+         +S+  M+ 
Sbjct: 30  GKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPHRSV--VSWTAMVS 87

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEA 321
           G A   R +EAL  F  ML +  RP++ TF S + AC    C R G Q+HA A K  F  
Sbjct: 88  GYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAG 147

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +A + M+  CG + +A  +FA ++ KD+VSWN+++  + +R     A+  +  M 
Sbjct: 148 DMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSML 207

Query: 382 SVGIRPDEFTFGSLLASSGFIEM---VEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             G+ PD FTFGS L + G I +   VE+IHA +   G         +LI +YAK   + 
Sbjct: 208 RDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLS 267

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLN-GFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            A  I+ +M   ++++   LI+G+ ++  +    ++ F ++    LR D   LS  L  C
Sbjct: 268 SARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVC 327

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A ++S++ G QIH Y+ K   +  ++L NA++ +YAK G+   S R F+ M  ++ ISW 
Sbjct: 328 ANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWT 387

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           +LI++ AQHG G++AV+ F  M++ G +KP+  TF ++LSACSH+G+++ G   F SM++
Sbjct: 388 SLITSCAQHGFGEDAVTLFARMEEDG-VKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMS 446

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            YG  P   H S  +DLL R G L++A  ++ + + + +S  +  +  AC  HGN+ LG 
Sbjct: 447 KYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGE 506

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  LL  + +    Y +L+N+YA + LWE+A   R+LL  T   K+ G S I
Sbjct: 507 TAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKGKEAGFSVI 560



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 227/494 (45%), Gaps = 15/494 (3%)

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           + S    PD++  T  +   +  G V  A  VFD MP R +  + AM++G  +N      
Sbjct: 39  ITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEA 98

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           + LF  M +   R + ++F S +  C  A     G Q+H+   K  F+  + V +AL+ M
Sbjct: 99  LDLFAFMLRSGARPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDM 158

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           +  CG+V DA ++F E +    D +S+N +M G        +AL  F  ML   + P   
Sbjct: 159 HLRCGSVGDARRLFAEMERK--DLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLPDHF 216

Query: 293 TFVSVMSACLCPRVGYQV---HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF S + AC    V + V   HA  +K G+        + I  Y+ C  +  A +I+  +
Sbjct: 217 TFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSM 276

Query: 350 QEKDIVSWNTMISTYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
            E D+VS   +IS Y+  RN    A+  + ++   G+R D     SLL   A+   I+  
Sbjct: 277 CEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFG 336

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             IHA++     + ++ + NAL+  YAK+     + + F  M  RN+I+W +LI     +
Sbjct: 337 TQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQH 396

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSL 524
           GF    +  F+ +    ++P++ T    LS+C+    +  G +    ++ K  +  +   
Sbjct: 397 GFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKH 456

Query: 525 GNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
            ++ + L A+ G L D  + V N   E  +  +  ++ A   HG      +   A +++ 
Sbjct: 457 YSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTMLGACKVHGNMPLGET---AAKNLL 513

Query: 584 RIKPDQATFTAVLS 597
            I P+ +   AVL+
Sbjct: 514 SIDPESSVNYAVLA 527



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/431 (21%), Positives = 196/431 (45%), Gaps = 49/431 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +++   Q+AL LF  +  S   +P+ ++  + + AC   R A  G Q+HA A +  
Sbjct: 86  VSGYAKNSRPQEALDLFAFMLRS-GARPNQFTFGSAVRACTGARCARSGEQIHACAAKGR 144

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 V + ++ ++     +   +R+F+E++  D+ SW                     
Sbjct: 145 FAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSW--------------------- 183

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
                     N+++ G  E  + +  +GLF  M +  +  D+++F S L  C A  + F 
Sbjct: 184 ----------NSLMRGFVEREHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFN 233

Query: 208 RQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC--DHISYNVMMD 264
            +L H+ + K G+      + +LI  Y  C ++  A  +++     +C  D +S   ++ 
Sbjct: 234 VELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDS----MCEPDLVSSTALIS 289

Query: 265 GLASVGR--VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF 319
           G  S+ R   ++A+  F  +    LR   +   S++  C      + G Q+HA   K   
Sbjct: 290 GY-SMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQP 348

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
               ++ NA + MY+  G+  ++   F  +  ++++SW ++I++ AQ   G  A+  +  
Sbjct: 349 MGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFAR 408

Query: 380 MQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G++P++ TF SLL++   SG + + +E   + +   GI    +  ++ +   A+  
Sbjct: 409 MEEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGG 468

Query: 436 RIKQAYQIFHN 446
           +++ A+ +  N
Sbjct: 469 QLEDAWMLVQN 479


>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
 gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 601

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/587 (30%), Positives = 309/587 (52%), Gaps = 12/587 (2%)

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           + L ++N  I      G+    +  +  M    +  +N++F  +L  C +   +  G  L
Sbjct: 16  KPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTML 75

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+ +   GF   V V  +L+ MY    N+  + +VF+E        IS+N M+   +   
Sbjct: 76  HAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSV--ISWNSMIAAYSRSF 133

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG--YQ---VHAQAMKSGFEAYTSV 325
           RV EAL  FR+ML     P+  TFVS++S    P  G  +Q   +H    K      T V
Sbjct: 134 RVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPV 193

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            N+ + MY + G+ID AC +F  + EK ++SW  M+  Y +          + +M+   +
Sbjct: 194 ENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNV 253

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             D+F F  +++S    G + +   +H+ +   G+     +   LIS Y+K   +  A  
Sbjct: 254 VLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARA 313

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  +S ++I +W ++I+G+   G+P + L  FS    + +RP+   L+ A+S+CA + S
Sbjct: 314 VFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGS 373

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L   ++I  ++ ++ L S   +  ++I LY K G ++ + +VFN MI +D  +W+++++ 
Sbjct: 374 LSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNG 433

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           YA HG G++ ++ F  MQ  G IKPD + + ++L ACSH+GLV+DG   F +M  DYG +
Sbjct: 434 YAVHGMGEKTMNLFHEMQRSG-IKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIV 492

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P   H +C++D+L RAG+L+ A   I     Q +S  W    SAC  + ++ LG +    
Sbjct: 493 PTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRC 552

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
           LL      P  +VL++N+Y + G W+EAA +R L+   G++K+PGCS
Sbjct: 553 LLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 599



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/563 (24%), Positives = 257/563 (45%), Gaps = 57/563 (10%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           +K+ L   N+++ +    G +  +L  +  +  S  +  + ++    L ACANL +   G
Sbjct: 14  TKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHS-GIHGNNFTFPLLLKACANLASIGDG 72

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             LHA+ +  G ++                               DV+  T+ +   +K 
Sbjct: 73  TMLHAHLIHVGFES-------------------------------DVFVQTSLVDMYSKF 101

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            ++  + +VFD+   R +  +N+MI   + +   +  + LFREM       ++ +F S+L
Sbjct: 102 SNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLL 161

Query: 197 S-VCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           S   D   G L  GR LH  +TK        V N+L+ MY N G +  AC VF       
Sbjct: 162 SGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKT 221

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-----Y 308
              IS+ +M+ G    G V +    F  M   ++   +  FV ++S+C+  ++G      
Sbjct: 222 V--ISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCI--QLGNLFLGS 277

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
            +H+  +K+G +    +    I+MYS CG +  A  +F  L EK I SW +MIS YA   
Sbjct: 278 SLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAG 337

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASS-------GFIEMVEMIHAFVFINGIITNI 421
             R A+  +       +RP+    G++LA++       G + M   I AF+  +G+ ++ 
Sbjct: 338 YPREALSLFSMATQNNVRPN----GAMLATAISACADLGSLSMRREIEAFIQQDGLASDS 393

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
           QVS +LI  Y K   I++A ++F++M  R++  W++++NG+ ++G   + +  F E+  S
Sbjct: 394 QVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRS 453

Query: 482 ELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
            ++PD    +  L +C+    +  G +      L   ++  M     ++ + ++ G L+ 
Sbjct: 454 GIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLEL 513

Query: 541 SLRVFNMMIEK-DTISWNALISA 562
           +L     M  +  + +W   +SA
Sbjct: 514 ALNTIQEMPTQFQSQAWAPFLSA 536



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 176/400 (44%), Gaps = 49/400 (12%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           TS   ++  N  +A  SRS    +AL LF ++      +P+  +  + L+  A+  + + 
Sbjct: 114 TSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGG-GFEPNSSTFVSLLSGFADPTHGSL 172

Query: 76  --GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  LH    +  L     V N+++ +Y N   + S   VF  I    V SWT  L   
Sbjct: 173 FQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGY 232

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
            K G V    +VF+                             F +M + +V  D + F 
Sbjct: 233 LKAGAV---AKVFET----------------------------FSQMRQNNVVLDKFVFV 261

Query: 194 SVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE---EA 249
            ++S C   G L  G  LHSL+ K+G      +   LI+MY  CG+++ A  VF+   E 
Sbjct: 262 DIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEK 321

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRV 306
             Y     S+  M+ G A+ G   EAL  F      ++RP+     + +SAC       +
Sbjct: 322 SIY-----SWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSM 376

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
             ++ A   + G  + + VS + I +Y   G I++A  +F  +  +D+ +W++M++ YA 
Sbjct: 377 RREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAV 436

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
             +G   +  + EMQ  GI+PD   + S+L   + SG +E
Sbjct: 437 HGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVE 476



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 6/260 (2%)

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV--- 405
           + +K +  WN  I +         ++  Y  M+  GI  + FTF  LL +   +  +   
Sbjct: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
            M+HA +   G  +++ V  +L+  Y+K   ++ + Q+F   S R++I+WN++I  +  +
Sbjct: 73  TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMS 523
               + L+ F E+L     P+  T    LS  A  +  SL  G+ +HG + K  L     
Sbjct: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192

Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
           + N+++ +Y   G +D +  VF  + EK  ISW  ++  Y + G   +    F  M+   
Sbjct: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQ-N 251

Query: 584 RIKPDQATFTAVLSACSHAG 603
            +  D+  F  ++S+C   G
Sbjct: 252 NVVLDKFVFVDIISSCIQLG 271


>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
 gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
          Length = 598

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 167/490 (34%), Positives = 262/490 (53%), Gaps = 17/490 (3%)

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-----LRPSELTFVSVMSACL----CP 304
           C H  +N ++  L   G    A   F  +LVAS      RP   T  + + AC       
Sbjct: 76  CAH-PFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGL 134

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           R G Q HA A K+GF     V NA +T Y +CG+  +A  +F  + E+D+VSW  ++S +
Sbjct: 135 REGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAF 194

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNI 421
            +  +   A+    EM    + P+E T  S+L + G +      + +H + F      N+
Sbjct: 195 TRGGMFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNL 251

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            V NAL+  Y K E++  A ++F  +  R+I++W  +I+G +    P + L+ F+ + +S
Sbjct: 252 IVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQIS 311

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            ++PD+  LS  LS+CA + +L  G+ +H Y+ +  +   + +G +++ +Y KCG LD +
Sbjct: 312 GVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTA 371

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           + +F  M  K+  SWNALI+ +A HG G+EA+ CF  M   G + P++ TF  VL AC H
Sbjct: 372 VSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASG-LHPNEVTFITVLGACCH 430

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           +GLV +G ++F+ M   Y   P EDH  CM+DLLGRAG + EA  VI +  ++     W 
Sbjct: 431 SGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWV 490

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            L SAC AHG +   + I   + E E     +YVLLSN+YA +  W +    R  +   G
Sbjct: 491 TLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKG 550

Query: 722 VIKQPGCSWI 731
           + K+PG S I
Sbjct: 551 MQKEPGSSVI 560



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 203/472 (43%), Gaps = 53/472 (11%)

Query: 24  LNISLANLSRSGHYQDALHLF----VQIHSSHKLKPDIYSLSTTLAACANLRNAAF-GNQ 78
            N  +++L+ +G    A   F    V   +    +PD Y+L   L ACA L      G Q
Sbjct: 80  FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
            HA A +AG      V N +++ Y         ++VF E+   DV SWT  LSA T+ G 
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
              A                               +G+  EM   DV  +  + ASVL  
Sbjct: 200 FMEA-------------------------------LGVLAEM---DVTPNEVTLASVLVA 225

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C + G    G+ +H    +      + V NAL+ MY  C  +  A +VF+       D +
Sbjct: 226 CGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLAR--DIV 283

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
           S+ VM+ GL    R  EAL  F  M ++ ++P ++   +V+SAC        G  VH   
Sbjct: 284 SWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYI 343

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
            + G E    V  + + MY  CG +D A  IF  +  K++ SWN +I+ +A    GR A+
Sbjct: 344 ERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREAL 403

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVS-NALISA 430
             +  M + G+ P+E TF ++L +   SG ++    +   +  +  ++  +     ++  
Sbjct: 404 DCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDL 463

Query: 431 YAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG---FPVQGLQHFSEL 478
             +   I++AY +   M  R  + TW TL++    +G   F  Q L H  EL
Sbjct: 464 LGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHEL 515



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 163/367 (44%), Gaps = 48/367 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           L+  +R G + +AL +  ++     + P+  +L++ L AC NL  A  G  +H +  R  
Sbjct: 191 LSAFTRGGMFMEALGVLAEM----DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRRE 246

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +    V N +L +Y     L   +RVF  +   D+ SWT  +S   +            
Sbjct: 247 KELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQC----------- 295

Query: 148 KMPDRDLPVYNAM-ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLE 205
           K P   L V+NAM I+G                     V+ D    ++VLS C + G LE
Sbjct: 296 KRPSEALEVFNAMQISG---------------------VKPDKVVLSTVLSACASLGALE 334

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +H  + + G    V V  +++ MY  CG +  A  +F+E    + +  S+N +++G
Sbjct: 335 SGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMP--LKNVSSWNALING 392

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS-GFEA 321
            A  GR  EAL  F  M+ + L P+E+TF++V+ AC      + G Q+     KS     
Sbjct: 393 FALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSP 452

Query: 322 YTSVSNAAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMIS---TYAQRNLGRSAILAY 377
           +       + +    G I EA  +I A      + +W T++S    + + +  +  ++  
Sbjct: 453 WEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHI 512

Query: 378 LEMQSVG 384
            E++S G
Sbjct: 513 HELESSG 519



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 68/282 (24%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++   + ++ L +     +AL +F  +  S  +KPD   LST L+ACA+L     G  +H
Sbjct: 282 IVSWTVMISGLVQCKRPSEALEVFNAMQIS-GVKPDKVVLSTVLSACASLGALESGRWVH 340

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            Y  R G++   HV  +++ +Y     L +   +F E+   +V SW   ++     G   
Sbjct: 341 EYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGR 400

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVC 199
            A + FD+M                      +  GL    H  +V     +F +VL + C
Sbjct: 401 EALDCFDRM----------------------VASGL----HPNEV-----TFITVLGACC 429

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
            +GL++ GRQL  L+TKS                            +E       DH  Y
Sbjct: 430 HSGLVQEGRQLFELMTKS-----------------------YKLSPWE-------DH--Y 457

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             M+D L   G ++EA    + M    +RP   T+V+++SAC
Sbjct: 458 GCMVDLLGRAGLIQEAYDVIKAM---PMRPGVFTWVTLLSAC 496


>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial; Flags: Precursor
 gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 601

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 178/533 (33%), Positives = 291/533 (54%), Gaps = 17/533 (3%)

Query: 209 QLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDG 265
           Q+H+ V  +G      S+   LI      G +  A KVF+E   +G       YN M+  
Sbjct: 35  QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV----YNSMIV- 89

Query: 266 LASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
           + S G+  + ++R  D ++A  ++P   TF   + ACL   V   G  V  +A+  G++ 
Sbjct: 90  VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V ++ + +Y  CGK+DEA ++F ++ ++D++ W TM++ +AQ      A+  Y EMQ
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209

Query: 382 SVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           + G   D      LL +SG +   +M   +H +++  G+  N+ V  +L+  YAK   I+
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A ++F  M  +  ++W +LI+GF  NG   +  +   E+     +PD  TL   L +C+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           ++ SL+ G+ +H Y+LK +++ +++   A++ +Y+KCG L  S  +F  +  KD + WN 
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +IS Y  HG G+E VS F  M +   I+PD ATF ++LSA SH+GLV+ G   F  M+N 
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           Y   P+E H  C++DLL RAG ++EA  +INS+ +      W AL S C  H NL +G I
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDI 507

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  +L+   D   +  L+SN +A A  W+E A +R+L++   + K PG S I
Sbjct: 508 AANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 219/447 (48%), Gaps = 12/447 (2%)

Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
            +++C ++G + YA +VFD++P R + VYN+MI   +     D  + L+ +M    ++ D
Sbjct: 56  LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115

Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           + +F   +  C +GL LE G  +       G+   V V ++++ +Y  CG + +A  +F 
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF- 174

Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCP 304
             K    D I +  M+ G A  G+  +A+  +R+M         +  + ++ A       
Sbjct: 175 -GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233

Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           ++G  VH    ++G      V  + + MY+  G I+ A  +F+R+  K  VSW ++IS +
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIITNI 421
           AQ  L   A  A +EMQS+G +PD  T  G L+A S  G ++   ++H ++    ++  +
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV 353

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
             + AL+  Y+K   +  + +IF ++  ++++ WNT+I+ + ++G   + +  F ++  S
Sbjct: 354 -TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDC 540
            + PD  T +  LS+ +    +  G+     ++    I         +I L A+ G ++ 
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472

Query: 541 SLRVFNMMIEKDTIS-WNALISAYAQH 566
           +L + N     + +  W AL+S    H
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINH 499



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 191/443 (43%), Gaps = 52/443 (11%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           SR  +  + L L+ Q+  + K++PD  + + T+ AC +      G  +   A+  G K  
Sbjct: 92  SRGKNPDEVLRLYDQM-IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V +++L+LY                                K G +D A  +F KM  
Sbjct: 151 VFVCSSVLNLY-------------------------------MKCGKMDEAEVLFGKMAK 179

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
           RD+  +  M+TG  + G     +  +REM      RD      +L    D G  + GR +
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  + ++G    V V  +L+ MY   G +  A +VF  ++      +S+  ++ G A  G
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF--SRMMFKTAVSWGSLISGFAQNG 297

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSN 327
              +A     +M     +P  +T V V+ AC      + G  VH   +K       + + 
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-AT 356

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MYS CG +  +  IF  +  KD+V WNTMIS Y     G+  +  +L+M    I P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416

Query: 388 DEFTFGSLLAS---SGFIEMVEMIHAF-VFINGIITNIQVSNA----LISAYAKNERIKQ 439
           D  TF SLL++   SG +E  +  H F V IN     IQ S      LI   A+  R+++
Sbjct: 417 DHATFASLLSALSHSGLVEQGQ--HWFSVMINKY--KIQPSEKHYVCLIDLLARAGRVEE 472

Query: 440 AYQIFHNMSPRNIIT-WNTLING 461
           A  + ++    N +  W  L++G
Sbjct: 473 ALDMINSEKLDNALPIWVALLSG 495



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 81/285 (28%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +++G    A    V++ S    +PD+ +L   L AC+ + +   G  +H Y L+  
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSL-GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR- 347

Query: 88  LKAYPHV-----ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
                HV     A  ++ +Y     L S + +F  +   D+  W T +S           
Sbjct: 348 -----HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC---------- 392

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDA 201
                               G   NG E   + LF +M + ++  D+ +FAS+LS +  +
Sbjct: 393 -------------------YGIHGNGQEV--VSLFLKMTESNIEPDHATFASLLSALSHS 431

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           GL+E G+   S+                         +++  K+    K YVC       
Sbjct: 432 GLVEQGQHWFSV-------------------------MINKYKIQPSEKHYVC------- 459

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELT-FVSVMSACLCPR 305
           ++D LA  GRVEEAL    DM+ +    + L  +V+++S C+  R
Sbjct: 460 LIDLLARAGRVEEAL----DMINSEKLDNALPIWVALLSGCINHR 500


>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 187/536 (34%), Positives = 291/536 (54%), Gaps = 18/536 (3%)

Query: 208 RQLHS-LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           +Q+H+ +V KS      S  N L++   +  N   A  +F     +  D+ ++N+M+  L
Sbjct: 35  QQVHAQMVVKSSIH---SPNNHLLSKAIHLKNFTYASLLFSHIAPHPNDY-AFNIMIRAL 90

Query: 267 ASV-GRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFE 320
            +       AL  F  M+  SL P+  TF     +C     L P      H+   K    
Sbjct: 91  TTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSP--ARAAHSLVFKLALH 148

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
           +    +++ ITMYS CG++  A  +F  +  +D+VSWN+MI+ YA+    R A+  + EM
Sbjct: 149 SDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEM 208

Query: 381 -QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNER 436
            +  G  PDE +  S+L + G +  +E+   +  FV   G+  N  + +ALIS YAK   
Sbjct: 209 GRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGD 268

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           +  A +IF  M+ R++ITWN +I+G+  NG   + +  F  +    +  ++ TL+  LS+
Sbjct: 269 LGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSA 328

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA I +L  GKQI  Y  +      + +  A+I +YAKCG L  + RVF  M +K+  SW
Sbjct: 329 CATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASW 388

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDV-GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           NA+ISA A HG+ KEA+S F+ M D  G  +P+  TF  +LSAC HAGLV++G R+FD M
Sbjct: 389 NAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMM 448

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              +G +P  +H SCM+DLL RAG+L EA  +I     +       AL  AC +  N+ +
Sbjct: 449 STLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDI 508

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           G  +  ++LE +      Y++ S IYA   +WE++A +R L+++ G+ K PGCSWI
Sbjct: 509 GERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWI 564



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 195/425 (45%), Gaps = 43/425 (10%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           HY  AL LF ++ S   L P+ ++      +CANL   +     H+   +  L + PH  
Sbjct: 96  HYPLALTLFHRMMSL-SLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTT 154

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           ++++++Y     +   ++VF EI   D+ SW + ++   K G    A EVF +M  RD  
Sbjct: 155 HSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRD-- 212

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
                       G+E                 D  S  SVL  C + G LE GR +   V
Sbjct: 213 ------------GFEP----------------DEMSLVSVLGACGELGDLELGRWVEGFV 244

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            + G +    + +ALI+MY  CG++  A ++F+       D I++N ++ G A  G  +E
Sbjct: 245 VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAAR--DVITWNAVISGYAQNGMADE 302

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           A+  F  M    +  +++T  +V+SAC       +G Q+   A + GF+    V+ A I 
Sbjct: 303 AISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALID 362

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDE 389
           MY+ CG +  A  +F  + +K+  SWN MIS  A     + A+  +  M  +  G RP++
Sbjct: 363 MYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPND 422

Query: 390 FTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            TF  LL++   +G + E   +      + G++  I+  + ++   A+   + +A+ +  
Sbjct: 423 ITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIE 482

Query: 446 NMSPR 450
            M  +
Sbjct: 483 KMPEK 487



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 72/384 (18%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  +++G  ++A+ +F ++      +PD  SL + L AC  L +   G  + 
Sbjct: 182 LVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVE 241

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
            + +  G+    ++ + ++S+Y    DL S +R+F  +   DV +W   +S         
Sbjct: 242 GFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVIS--------- 292

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                                 G  +NG  D  I LF  M +  V  +  +  +VLS C 
Sbjct: 293 ----------------------GYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACA 330

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L+ G+Q+    ++ GF   + V  ALI MY  CG++  A +VF+E      +  S+
Sbjct: 331 TIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQK--NEASW 388

Query: 260 NVMMDGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
           N M+  LAS G+ +EAL  F+ M       RP+++TFV ++SAC        VHA  +  
Sbjct: 389 NAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSAC--------VHAGLVNE 440

Query: 318 GFEAYTSVSNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL- 375
           G+  +  +S    T++    KI+  +CM+       D+              L R+  L 
Sbjct: 441 GYRLFDMMS----TLFGLVPKIEHYSCMV-------DL--------------LARAGHLY 475

Query: 376 -AYLEMQSVGIRPDEFTFGSLLAS 398
            A+  ++ +  +PD+ T G+LL +
Sbjct: 476 EAWDLIEKMPEKPDKVTLGALLGA 499


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 216/712 (30%), Positives = 351/712 (49%), Gaps = 60/712 (8%)

Query: 36  HYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           H + AL  F ++  S +   ++ SL   ++A ++L   +FG  +H   ++ G K++  VA
Sbjct: 273 HPEKALCYFKRMSFSEETADNV-SLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVA 331

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N+++SLY    D+ + + +F EI   D+ SW                             
Sbjct: 332 NSLISLYSQCEDIKAAETLFREIALKDIVSW----------------------------- 362

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVCDAGLLEF-GRQLHSL 213
             NAM+ G   NG       L  +M K+   + D  +  ++L +C   +L   GR +H  
Sbjct: 363 --NAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGY 420

Query: 214 -VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + +   S  V ++N+LI MY  C  V  A  +F        D +S+N M+ G +     
Sbjct: 421 AIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEK--DTVSWNAMISGYSHNRYS 478

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSN 327
           EEA   F +ML      S  T  +++S+C    +     G  VH   +KSGF  +  + N
Sbjct: 479 EEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLIN 538

Query: 328 AAITMYSSCGKIDEACMIFARLQEK----DIVSWNTMISTYAQRNLGRSAILAY-LEMQS 382
             + MY +CG +  +   F+ L E     DI SWNT+I    + +  R A+  + L  Q 
Sbjct: 539 ILMHMYINCGDLTAS---FSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQE 595

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
             +  D  T  S L++   +E+  +   +H     + + ++ +V N+LI+ Y +   I  
Sbjct: 596 PPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINS 655

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  +F   S  N+ +WN +I+    N    + L+ F  L   +  P+E T+   LS+C +
Sbjct: 656 AKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNL---QFEPNEITIIGVLSACTQ 712

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           I  LRHGKQ+H +V +  +     +  A+I LY+ CG LD +L+VF    EK   +WN++
Sbjct: 713 IGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEKSESAWNSM 772

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           ISAY  HG+G++A+  F  M + G  +  ++TF ++LSACSH+GLV+ G   ++ M+  Y
Sbjct: 773 ISAYGYHGKGEKAIKLFHEMCESGA-RVSKSTFVSLLSACSHSGLVNQGLWFYECMLERY 831

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
           G  P  +H   ++D+LGR+G LDEA            S  W AL SAC  HG L+LG+ I
Sbjct: 832 GVQPETEHQVYVVDMLGRSGRLDEAYEFAKGCD---SSGVWGALLSACNYHGELKLGKKI 888

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           A  L + E      Y+ LSN+Y AAG W++A  +R+ ++  G+ K  G S +
Sbjct: 889 AQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQSIQDLGLRKTAGYSLV 940



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 174/636 (27%), Positives = 302/636 (47%), Gaps = 66/636 (10%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L   ++A  +++N   G  +H  ++++G+     + N ++ +Y    DL S + ++
Sbjct: 191 DSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLY 250

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            EI+  D  SW                               N+++ G   N + +  + 
Sbjct: 251 EEIECKDAVSW-------------------------------NSIMRGSLYNRHPEKALC 279

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            F+ M   +   DN S    +S   + G L FG+ +H L  K G+   VSV N+LI++Y 
Sbjct: 280 YFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYS 339

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELT 293
            C ++  A  +F E    + D +S+N MM+G AS G+++E       M  V   +P  +T
Sbjct: 340 QCEDIKAAETLFREIA--LKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVT 397

Query: 294 FVSVMSAC---LCPRVGYQVHAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACMIFARL 349
            ++++  C   +  R G  +H  A++      +  + N+ I MYS C  +++A ++F   
Sbjct: 398 LITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNST 457

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS-----GFIEM 404
            EKD VSWN MIS Y+       A   + EM   G      T  ++L+S        I  
Sbjct: 458 AEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHF 517

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH-NMSPRNIITWNTLINGFL 463
            + +H +   +G + +I + N L+  Y     +  ++ I H N +  +I +WNTLI G +
Sbjct: 518 GKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCV 577

Query: 464 LNGFPVQGLQHFSELLMSELRP---DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
                 + L+ F+  LM +  P   D  TL  ALS+CA +     GK +HG  +K+ L S
Sbjct: 578 RCDHFREALETFN--LMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGS 635

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              + N++IT+Y +C D++ +  VF      +  SWN +ISA + + E +EA+  F  +Q
Sbjct: 636 DTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQ 695

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLG 636
                +P++ T   VLSAC+  G++  G +    +F + + D  FI A      ++DL  
Sbjct: 696 ----FEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAA-----LIDLYS 746

Query: 637 RAGYLDEAERVINSQHIQARSDNWW-ALFSACAAHG 671
             G LD A +V   +H + +S++ W ++ SA   HG
Sbjct: 747 NCGRLDTALQVF--RHAKEKSESAWNSMISAYGYHG 780



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 174/683 (25%), Positives = 301/683 (44%), Gaps = 88/683 (12%)

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H  AL+ G  A+   + ++L++Y  A D  S K +F EIQN D  +W             
Sbjct: 114 HCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAW------------- 160

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                             NA++    EN    I +  F +M K     D+    ++L + 
Sbjct: 161 ------------------NAIVAASLENKCYRIAMDFFDKMIKAQTGFDS---TTLLLIV 199

Query: 200 DAGL----LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            A L     + GR +H +  KSG    +S+ NAL+ MY  CG++  +  ++EE +    D
Sbjct: 200 SASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECK--D 257

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
            +S+N +M G       E+AL  F+ M  +      ++    +SA         G  VH 
Sbjct: 258 AVSWNSIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHG 317

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K G++++ SV+N+ I++YS C  I  A  +F  +  KDIVSWN M+  +A     + 
Sbjct: 318 LGIKLGYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKE 377

Query: 373 AILAYLEMQSVG-IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN-IQVSNAL 427
                ++MQ VG  +PD  T  +LL     + +      IH +     +I++ + + N+L
Sbjct: 378 VFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSL 437

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  Y+K   +++A  +F++ + ++ ++WN +I+G+  N +  +    F+E+L        
Sbjct: 438 IGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSS 497

Query: 488 YTLSVALSSC--ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
            T+   LSSC    I+S+  GK +H + LK+  ++ + L N ++ +Y  CGDL  S   F
Sbjct: 498 STVFAILSSCNSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTAS---F 554

Query: 546 NMMIEK----DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           +++ E     D  SWN LI    +    +EA+  F  M+    +  D  T  + LSAC++
Sbjct: 555 SILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACAN 614

Query: 602 AGLVDDG---------------TRIFDSMVNDYG-------------FIPAEDHLS--CM 631
             L + G               TR+ +S++  Y              F    +  S  CM
Sbjct: 615 LELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCM 674

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII-AGLLLEREQDK 690
           +  L       EA  +  +   +        + SAC   G LR G+ + A +     QD 
Sbjct: 675 ISALSHNRESREALELFLNLQFEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDN 734

Query: 691 PSVYVLLSNIYAAAGLWEEAANI 713
             +   L ++Y+  G  + A  +
Sbjct: 735 SFISAALIDLYSNCGRLDTALQV 757



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 252/562 (44%), Gaps = 49/562 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++  N  +   + +G  ++   L VQ+      +PDI +L T L  CA L  +  G  +H
Sbjct: 359 IVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIH 418

Query: 81  AYALRAGLKA-YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            YA+R  + + +  + N+++ +Y                               +K   V
Sbjct: 419 GYAIRRQMISDHVMLLNSLIGMY-------------------------------SKCNLV 447

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
           + A  +F+   ++D   +NAMI+G + N Y +    LF EM +      + +  ++LS C
Sbjct: 448 EKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSC 507

Query: 200 DA---GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           ++     + FG+ +H    KSGF   + ++N L+ MY NCG++  +  +  E    + D 
Sbjct: 508 NSLNINSIHFGKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSA-LADI 566

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACL---CPRVGYQVHA 312
            S+N ++ G        EAL  F  M     L    +T VS +SAC       +G  +H 
Sbjct: 567 ASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHG 626

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +KS   + T V N+ ITMY  C  I+ A ++F      ++ SWN MIS  +     R 
Sbjct: 627 LTVKSPLGSDTRVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESRE 686

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           A+  +L +Q     P+E T   +L++    G +   + +HA VF   I  N  +S ALI 
Sbjct: 687 ALELFLNLQ---FEPNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALID 743

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+   R+  A Q+F +   ++   WN++I+ +  +G   + ++ F E+  S  R  + T
Sbjct: 744 LYSNCGRLDTALQVFRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKST 803

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM 548
               LS+C+    +  G   +  +L+   +   +     ++ +  + G LD +   F   
Sbjct: 804 FVSLLSACSHSGLVNQGLWFYECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYE-FAKG 862

Query: 549 IEKDTISWNALISAYAQHGEGK 570
            +   + W AL+SA   HGE K
Sbjct: 863 CDSSGV-WGALLSACNYHGELK 883



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 157/362 (43%), Gaps = 48/362 (13%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R  H+++AL  F  +     L  D  +L + L+ACANL     G  LH   +++ L +  
Sbjct: 578 RCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDT 637

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N+++++Y   RD+ S K VF     P++ SW                          
Sbjct: 638 RVQNSLITMYDRCRDINSAKVVFKFFSTPNLCSW-------------------------- 671

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                N MI+  + N      + LF     L    +  +   VLS C   G+L  G+Q+H
Sbjct: 672 -----NCMISALSHNRESREALELFL---NLQFEPNEITIIGVLSACTQIGVLRHGKQVH 723

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           + V ++       +  ALI +Y NCG +  A +VF  AK       ++N M+      G+
Sbjct: 724 AHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKEK--SESAWNSMISAYGYHGK 781

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSN 327
            E+A+  F +M  +  R S+ TFVS++SAC    L  +  +       + G +  T    
Sbjct: 782 GEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWFYECMLERYGVQPETEHQV 841

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST---YAQRNLGR--SAILAYLEMQS 382
             + M    G++DEA   FA+  +   V W  ++S    + +  LG+  +  L  LE Q+
Sbjct: 842 YVVDMLGRSGRLDEA-YEFAKGCDSSGV-WGALLSACNYHGELKLGKKIAQYLFQLEPQN 899

Query: 383 VG 384
           VG
Sbjct: 900 VG 901


>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
 gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
          Length = 590

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 261/444 (58%), Gaps = 8/444 (1%)

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + + ++AC+  R    G QVHA+ + + +     +    +TMY  CG +D+A  +  R+ 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EM 407
           E+ +VSW TMIS Y+Q      A+  +++M   G  P+E+T  ++L S    + +   + 
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+ +      +++ V ++L+  YAK+E I++A ++F  +  R++++   +I+G+   G 
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L  F +L    ++ +  T +  +++ + ++SL +GKQ+H  +L+  L   ++L N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+KCG L  S RVF+ M+E+  +SWNA++  Y +HG G E +S FK +     +KP
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK--EVKP 310

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  T  AVLS CSH GLVD+G  IFD++V +   +    H  C++DLLGR+G L++A  +
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +   ++    W +L  AC  H N+ +G ++A  LLE E +    YV+LSNIYAAAG+W
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 430

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++   +R+L+    V K+PG SWI
Sbjct: 431 KDVFKVRKLMLEKTVTKEPGQSWI 454



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 181/379 (47%), Gaps = 15/379 (3%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+ +    P V+  T  ++   + G +D A  V D+MP+R +  +  MI+G ++      
Sbjct: 35  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF +M +     + Y+ A+VL+ C      + G+Q+HSL+ K+ F   + V ++L+ 
Sbjct: 95  ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY    N+ +A +VF+       D +S   ++ G A  G  EEAL  FR +    ++ + 
Sbjct: 155 MYAKSENIQEARRVFDTLPER--DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNH 212

Query: 292 LTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +TF   V+ +S       G QVHA  ++     + ++ N+ I MYS CGK+  +  +F  
Sbjct: 213 VTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDN 272

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EM 404
           + E+ +VSWN M+  Y +  LG   I  + ++    ++PD  T  ++L+     G + E 
Sbjct: 273 MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG 331

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           +++    V     + +      +I    ++ R+++A  +  NM   +  +    I G LL
Sbjct: 332 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS----IWGSLL 387

Query: 465 NGFPVQGLQHFSELLMSEL 483
               V    H  EL+  +L
Sbjct: 388 GACRVHANVHVGELVAQKL 406



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 144/276 (52%), Gaps = 38/276 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S++  + +AL LF+++  +  + P+ Y+L+T L +C+  ++   G Q+H+  ++  
Sbjct: 83  ISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +++  V +++L +Y  + ++   +RVF                               D
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVF-------------------------------D 170

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
            +P+RD+    A+I+G  + G ++  + LFR+++   ++ ++ +F ++++   +GL  L+
Sbjct: 171 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL-SGLASLD 229

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +G+Q+H+L+ +      V++ N+LI MY  CG ++ + +VF+         +S+N M+ G
Sbjct: 230 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSV--VSWNAMLMG 287

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
               G   E +  F+D L   ++P  +T ++V+S C
Sbjct: 288 YGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGC 322


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 213/704 (30%), Positives = 358/704 (50%), Gaps = 36/704 (5%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEI 118
           L++ L +C    +   G  LHA  + +G  A    +AN ++++Y +  DL S  R+F+ +
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDRDL----------PVYNAMIT 162
              +  SWTT +S  ++      A   F  M      P R +          P +    +
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 163 GCTENGYEDI---GIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG 218
            C       +   G  L+R              AS+L  C  AG L  GR LH+ +  SG
Sbjct: 143 HCHSGPTLMVKYWGQRLWRP--PAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSG 200

Query: 219 FSCLVS-VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
            +   + + N LITMY +C ++  A ++F        + +S+  ++ GL+      +AL 
Sbjct: 201 AAAASTFLANHLITMYSHCADLASALRLFAAMPRR--NAVSWTTLVSGLSQNLMHADALA 258

Query: 278 RFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA--QAMKSGFEAYTSVSNAAITMYSS 335
            F  M  A + P+     S   A        +  +   +   GF+    V++    MYS 
Sbjct: 259 AFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASASVGFDTELFVASNLADMYSK 318

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGS 394
           CG + EAC +F ++ +KD V+W  MI  YA+     +A+L++ +M+  G +  D+  F S
Sbjct: 319 CGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCS 378

Query: 395 LLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR- 450
           +L++SG ++   + + IH  V   G    + V NALI  YAK+  ++ A ++   + P  
Sbjct: 379 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVL-KIDPGG 437

Query: 451 -NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            N+++  ++I+G++      + L  + EL    + P+E+T S  +  CA  + L  G Q+
Sbjct: 438 WNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQL 497

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H  V+K +LI    +G+ ++ +Y KCG +  S+++FN +  +  I+WNA+I+ +AQHG G
Sbjct: 498 HAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHG 557

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
           +EA+  F  M   G I+P+   F ++L+ACSHAGLVD+G + F SM   +G  P E+H S
Sbjct: 558 REAIQAFDRMIYSG-IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYS 616

Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
           C++D  GRAG LDEA + I+   I+  +  W +L  AC   G+  LG + A  L++ E  
Sbjct: 617 CIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPG 676

Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIGS 733
              ++V LS IYA+ G WE+   +R+L++ + + K PG SW+ S
Sbjct: 677 NTGIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDS 720



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 12/163 (7%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++AL ++V++     ++P+ ++ S+ +  CA       G QLHA  ++  L     V +T
Sbjct: 457 EEALVIYVELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 515

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PD 151
           ++ +Y     +    ++F+EI+     +W   ++   + GH   A + FD+M      P+
Sbjct: 516 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 575

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
                + +++T C+  G  D G+  F   +E H ++ + ++YS
Sbjct: 576 H--IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYS 616


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 196/594 (32%), Positives = 309/594 (52%), Gaps = 63/594 (10%)

Query: 149 MPDRDLPVY------NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDA 201
           +P +D  V       N MIT  +++G       LF EM + DV     ++ +V+S     
Sbjct: 41  IPRKDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDV----ITWTTVISGYIKC 96

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G++E  R+L   V        V    A++  Y     + DA K+F E      + +S+N 
Sbjct: 97  GMIEEARRLFDRVDAKKN---VVTWTAMVGGYIRSNKISDAEKLFNEMPNK--NVVSWNT 151

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEA 321
           M+DG A  GR++ A+  F  M   ++  S  T +S+++ C     G    A+ +      
Sbjct: 152 MIDGYAQNGRIDSAMYLFEKMPERNV-VSWNTVMSMLAQC-----GRIEEARRLFDRMPE 205

Query: 322 YTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
              +S  A I   S  G+IDEA ++F R+ E+++VSWN MI+ YAQ              
Sbjct: 206 RDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQ-------------- 251

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
               +R DE       A   F  M E             ++   N +I+   +N  +++A
Sbjct: 252 ---NLRLDE-------ALDLFERMPE------------RDLPSWNTMITGLIQNGDLRRA 289

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCAR 499
            ++F+ M  +N+I+W T+I G +  G   + L+ FS +L +   +P++ T    L +C+ 
Sbjct: 290 RKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSN 349

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN--MMIEKDTISWN 557
           ++ L  G+Q+H  + K        + +A+I +Y+KCG+L  + ++F+  M  ++D +SWN
Sbjct: 350 LAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWN 409

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +I+AYA HG GKEA++ FK M+  G  KPD  T+  +LSACSHAGLV++G + FD +V 
Sbjct: 410 GIIAAYAHHGYGKEAINFFKEMRKSG-FKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK 468

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           D   +  EDH +C++DL GRAG L EA   I     +  +  W AL + C  H N+++G+
Sbjct: 469 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGK 528

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  LLE E +    Y+LLSNIYA+ G W EAA +R  +K  G+ KQPGCSWI
Sbjct: 529 QAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 187/412 (45%), Gaps = 53/412 (12%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT++S+      +   +R+F  +   DV SWT  ++  +K G +D A  +FD+MP+R++ 
Sbjct: 181 NTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVV 240

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +NAMITG  +N   D  + LF  M + D                               
Sbjct: 241 SWNAMITGYAQNLRLDEALDLFERMPERD------------------------------- 269

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
                  +   N +IT     G++  A K+F E      + IS+  M+ G    G  EEA
Sbjct: 270 -------LPSWNTMITGLIQNGDLRRARKLFNEMPKK--NVISWTTMITGCVQEGESEEA 320

Query: 276 LIRFRDMLVAS-LRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           L  F  ML  +  +P++ TFVSV+ AC        G QVH    K+ ++  T V +A I 
Sbjct: 321 LKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALIN 380

Query: 332 MYSSCGKIDEACMIF--ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           MYS CG++  A  +F      ++D+VSWN +I+ YA    G+ AI  + EM+  G +PD+
Sbjct: 381 MYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDD 440

Query: 390 FTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            T+  LL++   +G +E  ++     V    I+        L+    +  R+K+A+    
Sbjct: 441 VTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIE 500

Query: 446 NMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            +  + +   W  L+ G  ++     G Q   +LL  E+ P+     + LS+
Sbjct: 501 RLETKPSARVWGALLAGCNVHANVKIGKQAAKKLL--EVEPENAGTYLLLSN 550



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/328 (19%), Positives = 128/328 (39%), Gaps = 73/328 (22%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G  ++AL +F ++ S++  KP+  +  + L AC+NL     G Q+H    +   +   
Sbjct: 313 QEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDST 372

Query: 93  HVANTILSLYKNARDLVSVKRVFSE--IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
            V + ++++Y    +L + +++F +      D+ SW                        
Sbjct: 373 FVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW------------------------ 408

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ 209
                  N +I     +GY    I  F+EM K   + D+ ++  +LS C  AGL+E G +
Sbjct: 409 -------NGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLK 461

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
                                  YF+   +V    +      Y C       ++D     
Sbjct: 462 -----------------------YFD--ELVKDRSILVREDHYAC-------LVDLCGRA 489

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           GR++EA   F  +     +PS   + ++++ C       ++  QA K   E     +   
Sbjct: 490 GRLKEA---FGFIERLETKPSARVWGALLAGCNV-HANVKIGKQAAKKLLEVEPENAGTY 545

Query: 330 I---TMYSSCGKIDEACMIFARLQEKDI 354
           +    +Y+S GK  EA  +  ++++K +
Sbjct: 546 LLLSNIYASTGKWREAARVRLKMKDKGL 573


>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 675

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 190/635 (29%), Positives = 337/635 (53%), Gaps = 53/635 (8%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
           ++ G +  A  +FD+MP+R+   +N MI G   +G +   +  F  M +    RD YS+ 
Sbjct: 53  SRSGKMGIARNLFDEMPERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPE----RDGYSWN 108

Query: 194 SVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
            V+S    AG L   R+L   + +      V  +N+L+  Y   G   +A ++F+E K +
Sbjct: 109 VVISGFAKAGELSVARRLFDAMPEKD----VVTLNSLLHGYILNGYSEEALRLFKELK-F 163

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR-PSEL--TFVSVMSACLCPRVGYQ 309
             D I+   ++   A +  ++        +L+  +   S++  + V+V + C   R+   
Sbjct: 164 SADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 223

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +  Q  +    + +++    I+ Y++CG+++E+  +F R   + ++ WN+MIS Y   N+
Sbjct: 224 MLEQIGEPDDHSLSTL----ISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNM 279

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNA 426
              A++ + EM++     D  T  +++ +    GF+E  + +H      G++ +I V++ 
Sbjct: 280 KFEALVLFNEMRN-ETWEDSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVAST 338

Query: 427 LISAYAKNE-------------------------------RIKQAYQIFHNMSPRNIITW 455
           L+  Y+K                                 RI  A ++F  +  +++I+W
Sbjct: 339 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 398

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
           N++ NGF  NG PV+ L++FS++   +L  DE +LS  +S+CA ISSL  G+Q+      
Sbjct: 399 NSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATI 458

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L S   + +++I LY KCG ++   RVF+ M++ D + WN++IS YA +G G EA+  
Sbjct: 459 VGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMISGYATNGHGFEAIDL 518

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           FK M   G I+P Q TF  VL+AC++ GLV++G  +F++M  D+GF+P ++H SCM+DLL
Sbjct: 519 FKKMSIAG-IRPTQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLL 577

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
            RAGY++EA  ++      A +  W ++   C A+G   +G+ +A  ++E E +    YV
Sbjct: 578 ARAGYVEEAIDLVEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYV 637

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            LS I+A +G WE +A +R+L++   V K PG SW
Sbjct: 638 QLSAIFATSGDWESSALVRKLMRENNVSKNPGSSW 672



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 253/539 (46%), Gaps = 45/539 (8%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           ++ LN  L     +G+ ++AL LF ++    K   D  +L+T L ACA L     G Q+H
Sbjct: 135 VVTLNSLLHGYILNGYSEEALRLFKEL----KFSADAITLTTVLKACAELEALKRGKQIH 190

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  L  G++    + ++++++Y    DL     +  +I  PD +S +T +S     G V+
Sbjct: 191 AQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIGEPDDHSLSTLISGYANCGRVN 250

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            +  +FD+  +R + ++N+MI+G   N  +   + LF EM   +   D+ + A+V++ C 
Sbjct: 251 ESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRN-ETWEDSRTLAAVINACI 309

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY------- 252
             G LE G+Q+H    K G    + V + L+ MY  CG+ ++ACK+F E + Y       
Sbjct: 310 GLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNS 369

Query: 253 ------VCDHI----------------SYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
                  C  I                S+N M +G +  G   E L  F  M    L   
Sbjct: 370 MIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTD 429

Query: 291 ELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E++  SV+SAC       +G QV A+A   G ++   VS++ I +Y  CG ++    +F 
Sbjct: 430 EVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFD 489

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE- 406
            + + D V WN+MIS YA    G  AI  + +M   GIRP + TF  +L +  +  +VE 
Sbjct: 490 TMVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEE 549

Query: 407 ---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGF 462
              +  A    +G + + +  + ++   A+   +++A  +   M    +   W++++ G 
Sbjct: 550 GRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDLVEEMPFDADASMWSSVLRGC 609

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           + NG+   G +   +++  EL P+     V LS+    S       +   +++ N +SK
Sbjct: 610 VANGYKAMGKKVAEKII--ELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVSK 666



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/585 (23%), Positives = 262/585 (44%), Gaps = 102/585 (17%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT++  Y N+ D  +  R F  +   D YSW   +S   K G +  A  +FD MP++D+ 
Sbjct: 77  NTMIEGYMNSGDKGTSLRFFDMMPERDGYSWNVVISGFAKAGELSVARRLFDAMPEKDVV 136

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLV 214
             N+++ G   NGY +  + LF+E   L    D  +  +VL  C +   L+ G+Q+H+ +
Sbjct: 137 TLNSLLHGYILNGYSEEALRLFKE---LKFSADAITLTTVLKACAELEALKRGKQIHAQI 193

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE- 273
              G  C   + ++L+ +Y  CG++  A  + E+  G   DH S + ++ G A+ GRV  
Sbjct: 194 LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI-GEPDDH-SLSTLISGYANCGRVNE 251

Query: 274 ------------------------------EALIRFRDMLVASLRPSELTFVSVMSACLC 303
                                         EAL+ F +M   +   S  T  +V++AC+ 
Sbjct: 252 SRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWEDSR-TLAAVINACIG 310

Query: 304 ---PRVGYQVHAQAMKSGF------------------------------EAYTSV-SNAA 329
                 G Q+H  A K G                               E+Y ++  N+ 
Sbjct: 311 LGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSM 370

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I +Y SCG+ID+A  +F R++ K ++SWN+M + ++Q       +  + +M  + +  DE
Sbjct: 371 IKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCPVETLEYFSQMHKLDLPTDE 430

Query: 390 FTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
            +  S++++   I  +   E + A   I G+ ++  VS++LI  Y K   ++   ++F  
Sbjct: 431 VSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDT 490

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           M   + + WN++I+G+  NG   + +  F ++ ++ +RP + T  V L++C     +  G
Sbjct: 491 MVKSDEVPWNSMISGYATNGHGFEAIDLFKKMSIAGIRPTQITFMVVLTACNYCGLVEEG 550

Query: 507 KQI-------HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNA 558
           + +       HG+V      S       M+ L A+ G ++ ++  V  M  + D   W++
Sbjct: 551 RLLFEAMKLDHGFVPDKEHFS------CMVDLLARAGYVEEAIDLVEEMPFDADASMWSS 604

Query: 559 LISAYAQHGEGKEAVSCFKAM-----QDVGRIKPDQATFTAVLSA 598
           ++     +G        +KAM     + +  ++P+ +     LSA
Sbjct: 605 VLRGCVANG--------YKAMGKKVAEKIIELEPENSVAYVQLSA 641



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 161/368 (43%), Gaps = 74/368 (20%)

Query: 309 QVHAQAMKSGF-EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
           Q +   +K GF  +   V+N  + +YS  GK+  A  +F  + E++  SWNTMI  Y   
Sbjct: 27  QTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEMPERNYFSWNTMIEGY--- 83

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
                       M S          G    S  F +M+     + +           N +
Sbjct: 84  ------------MNS----------GDKGTSLRFFDMMPERDGYSW-----------NVV 110

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           IS +AK   +  A ++F  M  ++++T N+L++G++LNG+  + L+ F EL  S    D 
Sbjct: 111 ISGFAKAGELSVARRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELKFS---ADA 167

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL--------- 538
            TL+  L +CA + +L+ GKQIH  +L   +     + ++++ +YAKCGDL         
Sbjct: 168 ITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 227

Query: 539 -----------------DC-----SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
                            +C     S R+F+    +  I WN++IS Y  +    EA+  F
Sbjct: 228 IGEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLF 287

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M++      D  T  AV++AC   G ++ G ++       +G +      S +LD+  
Sbjct: 288 NEMRN--ETWEDSRTLAAVINACIGLGFLETGKQMH-CHACKFGLVDDIVVASTLLDMYS 344

Query: 637 RAGYLDEA 644
           + G   EA
Sbjct: 345 KCGSPMEA 352


>gi|224146493|ref|XP_002326026.1| predicted protein [Populus trichocarpa]
 gi|222862901|gb|EEF00408.1| predicted protein [Populus trichocarpa]
          Length = 737

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 203/680 (29%), Positives = 337/680 (49%), Gaps = 78/680 (11%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
            S+ G+ ++A   F ++      +P+ ++LS  L+ CA++ +   G  L A A++ GL  
Sbjct: 89  FSKYGYLEEAWRTFCEMIDC-GFRPNNFTLSGLLS-CASM-DVGRGIMLQALAIKNGLFC 145

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                                          DV+  T  L    + G +D A  VF+ MP
Sbjct: 146 ------------------------------SDVFVGTALLGLFGRCGWLDEAFHVFEDMP 175

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS--VCDAGLLEFGR 208
           D+ L  +N+MI+    +G+ +  + LFR++ + +      SF  VLS  VC+  L EFG 
Sbjct: 176 DKSLVTWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVLSGLVCEEDL-EFGG 234

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+H LV KSG  C V V N+LI MY    ++    K+FEE  G   D +++N ++   + 
Sbjct: 235 QIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGR--DVVTWNTIISAFSK 292

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSV 325
                +AL  F  M    + P++ TFVSV+++C   L P  G  VH + +K+  E    +
Sbjct: 293 SKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYL 352

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            +A +  Y+ CGK+D A   F  + +K++VSWN++I  YA +    +++   LEM  +G 
Sbjct: 353 GSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGYANK-CSFASVSLLLEMLKLGF 411

Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY---- 441
           RP+EF+F ++L SS  +E+ + IH+     G   N  V  +LI++Y +N  I  A     
Sbjct: 412 RPNEFSFSAVLKSSLVLEL-KQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVK 470

Query: 442 ----------------------------QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
                                       +    +   + ++WN +I     NG   +  +
Sbjct: 471 ASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFE 530

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLY 532
            F  + ++++ PD YT +  L   +++ +L  G  IHG ++K N     + + N +I +Y
Sbjct: 531 LFKHMRVAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMY 590

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            KCG+L+ S ++F+ M E++ I+W ALISA   +G  +EA+  F  M+ +G  +PD+  F
Sbjct: 591 GKCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEALERFNDMEFLGS-RPDKVAF 649

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            AVL+AC H  LV +G ++F  M N+Y   P  DH  C++DLL R G+L+EAE+VI+   
Sbjct: 650 IAVLTACRHGALVREGMQLFGKM-NNYHIEPDMDHYHCLVDLLARNGHLEEAEKVISCMP 708

Query: 653 IQARSDNWWALFSACAAHGN 672
               +  W +    C    N
Sbjct: 709 FPPDAQIWRSFLEGCKKRRN 728



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/600 (27%), Positives = 288/600 (48%), Gaps = 65/600 (10%)

Query: 120 NPD--VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
           NP+   + +   +S       V  A +VFD MP R+   YN++I+  ++ GY +     F
Sbjct: 43  NPEQSTFVYNNIISFYASFNQVPMAHKVFDNMPHRNKVSYNSIISCFSKYGYLEEAWRTF 102

Query: 178 REMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNC 236
            EM     R +N++ + +LS C +  +  G  L +L  K+G  C  V V  AL+ ++  C
Sbjct: 103 CEMIDCGFRPNNFTLSGLLS-CASMDVGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRC 161

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G + +A  VFE+        +++N M+  L   G VE+ ++ FR ++      S+ +F  
Sbjct: 162 GWLDEAFHVFEDMPDK--SLVTWNSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEG 219

Query: 297 VMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+S  +C      G Q+H   +KSG +    VSN+ I MY+    + +   +F  +  +D
Sbjct: 220 VLSGLVCEEDLEFGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRD 279

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS--SGFIEMV-EMIHA 410
           +V+WNT+IS +++      A+  +L+M   GI P++ TF S++ S  S  + M  E +H 
Sbjct: 280 VVTWNTIISAFSKSKNPGKALEVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHG 339

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            +    + T++ + +AL+  YAK  ++  A+  F  +  +N+++WN+LI G+  N     
Sbjct: 340 KIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREIHQKNVVSWNSLILGY-ANKCSFA 398

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSC-----ARISSL--RHGKQIHGYVL--------K 515
            +    E+L    RP+E++ S  L S       +I SL  R G + + YVL        +
Sbjct: 399 SVSLLLEMLKLGFRPNEFSFSAVLKSSLVLELKQIHSLTIRLGYENNEYVLTSLITSYGR 458

Query: 516 NNLISKMSL-------------GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           N LI+   +              N++  +Y + G    +L+  + + E DT+SWN +I+A
Sbjct: 459 NGLITDALIFVKASETLLAVVPANSIAGIYNRSGQYFETLKFLSQLEEPDTVSWNIVIAA 518

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS-----------HAGLVDDGTRI 611
            A++G   E    FK M+ V ++ PD  T+T++L   S           H  L+      
Sbjct: 519 CARNGNYNEVFELFKHMR-VAQMLPDNYTYTSLLCVSSKVCNLALGSSIHGLLIKTNFSY 577

Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           FD +V +            ++D+ G+ G L+ + ++ +S   +     W AL SA   +G
Sbjct: 578 FDIVVRN-----------VLIDMYGKCGNLESSAKIFDSM-TERNLITWTALISALGING 625



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 250/527 (47%), Gaps = 46/527 (8%)

Query: 184 DVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS--VVNALITMYFNCGNVV 240
           D  +  Y    +L  C     L+  + LH+L    G +   S  V N +I+ Y +   V 
Sbjct: 6   DFLKYQYRLLQLLQSCSKLRALDTTKPLHALTITIGPNPEQSTFVYNNIISFYASFNQVP 65

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
            A KVF+       + +SYN ++   +  G +EEA   F +M+    RP+  T   ++S 
Sbjct: 66  MAHKVFDNMPHR--NKVSYNSIISCFSKYGYLEEAWRTFCEMIDCGFRPNNFTLSGLLS- 122

Query: 301 CLCPRVGYQVHAQAM--KSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C    VG  +  QA+  K+G F +   V  A + ++  CG +DEA  +F  + +K +V+W
Sbjct: 123 CASMDVGRGIMLQALAIKNGLFCSDVFVGTALLGLFGRCGWLDEAFHVFEDMPDKSLVTW 182

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI-----EMVEMIHAFV 412
           N+MIS           ++ + ++        + +F  +L  SG +     E    IH  V
Sbjct: 183 NSMISLLGHHGFVEDCVVLFRKLVRKEGSLSKCSFEGVL--SGLVCEEDLEFGGQIHGLV 240

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
             +G+   + VSN+LI+ YA+   + Q  ++F  +  R+++TWNT+I+ F  +  P + L
Sbjct: 241 IKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFSKSKNPGKAL 300

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F ++    + P++ T    ++SC  +     G+ +HG ++K  L + + LG+A++  Y
Sbjct: 301 EVFLKMSEDGIMPNQTTFVSVINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYY 360

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           AKCG LD +   F  + +K+ +SWN+LI  YA       +VS    M  +G  +P++ +F
Sbjct: 361 AKCGKLDNAHYCFREIHQKNVVSWNSLILGYANKCSFA-SVSLLLEMLKLG-FRPNEFSF 418

Query: 593 TAVLSACSHAGL-----------VDDGTRIFDSMVNDYG----------FIPAEDHLSCM 631
           +AVL +     L            ++   +  S++  YG          F+ A + L  +
Sbjct: 419 SAVLKSSLVLELKQIHSLTIRLGYENNEYVLTSLITSYGRNGLITDALIFVKASETLLAV 478

Query: 632 LD------LLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +       +  R+G   E  + + SQ  +  + +W  + +ACA +GN
Sbjct: 479 VPANSIAGIYNRSGQYFETLKFL-SQLEEPDTVSWNIVIAACARNGN 524



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 130/542 (23%), Positives = 240/542 (44%), Gaps = 75/542 (13%)

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
           FG Q+H   +++GL     V+N+++++Y     +  V+++F E+   DV +W T +SA +
Sbjct: 232 FGGQIHGLVIKSGLDCEVLVSNSLINMYARRSSMSQVEKLFEEVDGRDVVTWNTIISAFS 291

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K  +   A EVF KM               +E+G                +  +  +F S
Sbjct: 292 KSKNPGKALEVFLKM---------------SEDG----------------IMPNQTTFVS 320

Query: 195 VLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           V++ C + L+   G  +H  + K+     V + +AL+  Y  CG + +A   F E   + 
Sbjct: 321 VINSCTSLLVPMCGEYVHGKIVKTALETDVYLGSALVDYYAKCGKLDNAHYCFREI--HQ 378

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            + +S+N ++ G A+        +   +ML    RP+E +F +V+ + L   +  Q+H+ 
Sbjct: 379 KNVVSWNSLILGYANKCSFASVSLLL-EMLKLGFRPNEFSFSAVLKSSLVLELK-QIHSL 436

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR------------------------- 348
            ++ G+E    V  + IT Y   G I +A +IF +                         
Sbjct: 437 TIRLGYENNEYVLTSLITSYGRNGLITDA-LIFVKASETLLAVVPANSIAGIYNRSGQYF 495

Query: 349 --------LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG 400
                   L+E D VSWN +I+  A+          +  M+   + PD +T+ SLL  S 
Sbjct: 496 ETLKFLSQLEEPDTVSWNIVIAACARNGNYNEVFELFKHMRVAQMLPDNYTYTSLLCVSS 555

Query: 401 FIEMVEM---IHAFVF-INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            +  + +   IH  +   N    +I V N LI  Y K   ++ + +IF +M+ RN+ITW 
Sbjct: 556 KVCNLALGSSIHGLLIKTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWT 615

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            LI+   +NG   + L+ F+++     RPD+      L++C   + +R G Q+ G +   
Sbjct: 616 ALISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKMNNY 675

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSC 575
           ++   M   + ++ L A+ G L+ + +V + M    D   W + +    +    ++   C
Sbjct: 676 HIEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGCKKRRNTEDHAVC 735

Query: 576 FK 577
            K
Sbjct: 736 IK 737



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 10/171 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI +A  +R+G+Y +   LF  +  +  L PD Y+ ++ L   + + N A G+ +H   +
Sbjct: 513 NIVIAACARNGNYNEVFELFKHMRVAQML-PDNYTYTSLLCVSSKVCNLALGSSIHGLLI 571

Query: 85  RAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +     +  V  N ++ +Y    +L S  ++F  +   ++ +WT  +SA    G    A 
Sbjct: 572 KTNFSYFDIVVRNVLIDMYGKCGNLESSAKIFDSMTERNLITWTALISALGINGCAQEAL 631

Query: 144 EVFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
           E F+ M      PD+    + A++T C        G+ LF +M+   +  D
Sbjct: 632 ERFNDMEFLGSRPDK--VAFIAVLTACRHGALVREGMQLFGKMNNYHIEPD 680


>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
          Length = 656

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 173/551 (31%), Positives = 275/551 (49%), Gaps = 59/551 (10%)

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G + DA  +F+       + +++  +M G    GR E AL  F DM+ + + P++    +
Sbjct: 62  GRLADALDLFDRMPRK--NVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 297 VMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
            + AC      R G QVH+ A+++GF     + +  I MYS CG +  A  +F R+   D
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEM--------------------------------- 380
           +V + ++IS + +      A  A ++M                                 
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIK 239

Query: 381 ------QSV--------------GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN 420
                 QSV              G+ P+EF    +L + G I +   +H     + +IT+
Sbjct: 240 KIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITD 299

Query: 421 IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           I+VSNAL+S Y +   +++   + + +   ++++W T I+    NGF  + +    ++  
Sbjct: 300 IRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHS 359

Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
               P+ Y  S  LSSCA ++SL  G Q H   LK    S++  GNA+I +Y+KCG +  
Sbjct: 360 EGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGS 419

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +   F++M   D  SWN+LI  +AQHG+  +A+  F  M+  G IKPD +TF  VL  C+
Sbjct: 420 ARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNG-IKPDDSTFLGVLMGCN 478

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNW 660
           H+G+V++G   F  M++ Y F PA  H +CM+D+LGR G  DEA R+IN    +  +  W
Sbjct: 479 HSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIW 538

Query: 661 WALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRT 720
             L ++C  H NL +G++ A  L+E      + YVL+SNIYA  G WE+A  +R  +  T
Sbjct: 539 KTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDET 598

Query: 721 GVIKQPGCSWI 731
           GV K  GCSWI
Sbjct: 599 GVKKDAGCSWI 609



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 225/509 (44%), Gaps = 65/509 (12%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           ++PDV      L+   K G +  A ++FD+MP +++  + ++++GCT NG  +  + +F 
Sbjct: 44  ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFA 103

Query: 179 EMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
           +M +  V  ++++  + L  C D G L  G Q+HSL  ++GF+    + + LI MY  CG
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163

Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
           ++  A +VF+       D + Y  ++      G  E A      ML   L+P+E T  ++
Sbjct: 164 SLPAAKEVFDRMDSP--DVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221

Query: 298 MSACLCPRV------GY------------------------------------------- 308
           ++A  CPRV      GY                                           
Sbjct: 222 LTA--CPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACG 279

Query: 309 ------QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
                 Q+H  A+K        VSNA ++MY   G ++E   +  +++  D+VSW T IS
Sbjct: 280 SIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAIS 339

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIIT 419
              Q   G  AI    +M S G  P+ + F S+L+S   +  ++     H      G  +
Sbjct: 340 ANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDS 399

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
            I   NALI+ Y+K  ++  A   F  M   ++ +WN+LI+G   +G   + L+ FS++ 
Sbjct: 400 EICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMR 459

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL 538
            + ++PD+ T    L  C     +  G+     ++   +     S    MI +  + G  
Sbjct: 460 SNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRF 519

Query: 539 DCSLRVFN-MMIEKDTISWNALISAYAQH 566
           D +LR+ N M  E D + W  L+++   H
Sbjct: 520 DEALRMINDMPFEPDALIWKTLLASCKLH 548



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 208/464 (44%), Gaps = 39/464 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  +R+G  + AL +F  +  S  + P+ ++ +  L ACA+L     G Q+H+ A+RAG
Sbjct: 86  MSGCTRNGRPEAALAMFADMVES-GVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG 144

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 + + ++ +Y     L + K VF  + +PDV  +T+ +SA  + G  + A E   
Sbjct: 145 FAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALI 204

Query: 148 KMPDRDLP----VYNAMITGCTE------NGYEDIGIGL-----FREMHKLD-------V 185
           +M  + L         ++T C        +GY    IGL     +     +D       V
Sbjct: 205 QMLKQGLKPNEHTMTTILTACPRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEGV 264

Query: 186 RRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
             + ++ + VL  C  G +  GRQLH    K      + V NAL++MY   G V +   +
Sbjct: 265 DPNEFALSIVLGAC--GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAM 322

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---L 302
             + +    D +S+   +      G  E+A+     M      P+   F SV+S+C    
Sbjct: 323 LNKIENP--DLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVA 380

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
               G Q H  A+K G ++     NA I MYS CG++  A + F  +   D+ SWN++I 
Sbjct: 381 SLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIH 440

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQ 422
            +AQ      A+  + +M+S GI+PD+ TF  +L       MVE     +F   +I    
Sbjct: 441 GHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVE--EGELFFRLMIDQYS 498

Query: 423 VSNA------LISAYAKNERIKQAYQIFHNMS-PRNIITWNTLI 459
            + A      +I    +N R  +A ++ ++M    + + W TL+
Sbjct: 499 FTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLL 542



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 96/167 (57%), Gaps = 1/167 (0%)

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K+ R+  A  +F  M  +N++ W ++++G   NG P   L  F++++ S + P+++  + 
Sbjct: 60  KSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACNA 119

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           AL +CA + +LR G+Q+H   ++        +G+ +I +Y++CG L  +  VF+ M   D
Sbjct: 120 ALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPD 179

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
            + + +LISA+ ++GE + A      M   G +KP++ T T +L+AC
Sbjct: 180 VVGYTSLISAFCRNGEFELAAEALIQMLKQG-LKPNEHTMTTILTAC 225


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 261/444 (58%), Gaps = 8/444 (1%)

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + + ++AC+  R    G QVHA+ + + +     +    +TMY  CG +D+A  +  R+ 
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EM 407
           E+ +VSW TMIS Y+Q      A+  +++M   G  P+E+T  ++L S    + +   + 
Sbjct: 73  ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+ +      +++ V ++L+  YAK+E I++A ++F  +  R++++   +I+G+   G 
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L  F +L    ++ +  T +  +++ + ++SL +GKQ+H  +L+  L   ++L N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+KCG L  S RVF+ M+E+  +SWNA++  Y +HG G E +S FK +     +KP
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK--EVKP 310

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  T  AVLS CSH GLVD+G  IFD++V +   +    H  C++DLLGR+G L++A  +
Sbjct: 311 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 370

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +   ++    W +L  AC  H N+ +G ++A  LLE E +    YV+LSNIYAAAG+W
Sbjct: 371 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 430

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++   +R+L+    V K+PG SWI
Sbjct: 431 KDVFKVRKLMLEKTVTKEPGQSWI 454



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 18/395 (4%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+ +    P V+  T  ++   + G +D A  V D+MP+R +  +  MI+G ++      
Sbjct: 35  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 94

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF +M +     + Y+ A+VL+ C      + G+Q+HSL+ K+ F   + V ++L+ 
Sbjct: 95  ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 154

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY    N+ +A +VF+       D +S   ++ G A  G  EEAL  FR +    ++ + 
Sbjct: 155 MYAKSENIQEARRVFDTLPER--DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNH 212

Query: 292 LTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +TF   V+ +S       G QVHA  ++     + ++ N+ I MYS CGK+  +  +F  
Sbjct: 213 VTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDN 272

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EM 404
           + E+ +VSWN M+  Y +  LG   I  + ++    ++PD  T  ++L+     G + E 
Sbjct: 273 MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG 331

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           +++    V     + +      +I    ++ R+++A  +  NM   +  +    I G LL
Sbjct: 332 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS----IWGSLL 387

Query: 465 NGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
               V    H  EL+   + E+ P+     V LS+
Sbjct: 388 GACRVHANVHVGELVAQKLLEMEPENAGNYVILSN 422



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 144/276 (52%), Gaps = 38/276 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S++  + +AL LF+++  +  + P+ Y+L+T L +C+  ++   G Q+H+  ++  
Sbjct: 83  ISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 141

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +++  V +++L +Y  + ++   +RVF                               D
Sbjct: 142 FESHMFVGSSLLDMYAKSENIQEARRVF-------------------------------D 170

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
            +P+RD+    A+I+G  + G ++  + LFR+++   ++ ++ +F ++++   +GL  L+
Sbjct: 171 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL-SGLASLD 229

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +G+Q+H+L+ +      V++ N+LI MY  CG ++ + +VF+         +S+N M+ G
Sbjct: 230 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSV--VSWNAMLMG 287

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
               G   E +  F+D L   ++P  +T ++V+S C
Sbjct: 288 YGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGC 322


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 216/698 (30%), Positives = 348/698 (49%), Gaps = 37/698 (5%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           SS ++K D Y+ S+ L ACA+ RN   G  +HA+ LR  +     V N++L++Y      
Sbjct: 64  SSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSST 123

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
               ++ S              S C      D   +VFD M  R +  +N +I       
Sbjct: 124 TPDGKMVSG------------YSRC------DLVRKVFDTMRKRTVVAWNTLIAWYVRTE 165

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCL--VSV 225
                +  F  M K+ ++    SF +V     + G  +    +H ++ K G   +  + V
Sbjct: 166 RYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYV 225

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG-RVEEALIRFRDMLV 284
           V++ I MY   G +  A KVF+       +   +N M+         +E   + F+ +  
Sbjct: 226 VSSAIFMYAELGCLEFAKKVFDNCLERNTE--VWNTMISAFVQNNFSLEGIQLFFQAVES 283

Query: 285 ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
                 E+T +S +SA    +   +  Q+HA  +K+       V NA I MYS C  ID 
Sbjct: 284 EDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDT 343

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           +  IF  + EKD+VSWNTMIS + Q  L   A++ + EM+   +  D  T  +LL+++  
Sbjct: 344 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 403

Query: 402 I---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWN 456
           +   ++ +  H ++  NGI     + + LI  YAK+  I+ A  +F       R+  TWN
Sbjct: 404 LRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++++G+  NG   Q      ++L  ++ P+  TL+  L +C     +  GKQ+HG+ ++N
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 522

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
           +L   + +  A+I +Y+K G +  +  VF+   EK  ++++ +I  Y QHG G+ A+  F
Sbjct: 523 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 582

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             MQ  G I+PD  T  AVLSACS+AGLVD+G +IF+SM   Y   P+ +H  C+ D+LG
Sbjct: 583 HRMQKSG-IQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLG 641

Query: 637 RAGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ--DKPSV 693
           RAG +D+A E VI         + W +L +AC  H    LG+++A  LLE E+   K   
Sbjct: 642 RAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGY 701

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +VLLSNIYA    WE    +R+ ++  G+ K+ G SWI
Sbjct: 702 HVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 739



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 274/544 (50%), Gaps = 40/544 (7%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK--LDVRRDNYSFAS 194
           G +  A ++FD +P     ++N +I G   N + D  +  +  M      V+ D+Y+++S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC------GNVVDA---C- 243
           VL  C D   L  G+ +H+   +   +    V N+L+ MY  C      G +V     C 
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 244 ---KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
              KVF+  +      +++N ++       R  EA+ +F  M+   ++PS ++FV+V  A
Sbjct: 138 LVRKVFDTMRKRTV--VAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 195

Query: 301 CLCP---RVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
                  +    VH   +K G E      V ++AI MY+  G ++ A  +F    E++  
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 255

Query: 356 SWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAF 411
            WNTMIS + Q N     I  + + ++S     DE T  S ++++  +   E+ E +HAF
Sbjct: 256 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAF 315

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           V  N  +T + V NALI+ Y++   I  +++IF NM  +++++WNT+I+ F+ NG   + 
Sbjct: 316 VIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEA 375

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F E+   +L  D  T++  LS+ + + +   GKQ HGY+L+N  I    + + +I +
Sbjct: 376 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNG-IQFEGMDSYLIDM 434

Query: 532 YAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           YAK G ++ +  VF      E+D  +WN+++S Y Q+G   +A    + M D  ++ P+ 
Sbjct: 435 YAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLD-QKVMPNV 493

Query: 590 ATFTAVLSACSHAGLVDDGTRIFD-SMVNDYG---FIPAEDHLSCMLDLLGRAGYLDEAE 645
            T  ++L AC+ +G +D G ++   S+ ND     F+      + ++D+  ++G +  AE
Sbjct: 494 VTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVA-----TALIDMYSKSGSIAHAE 548

Query: 646 RVIN 649
            V +
Sbjct: 549 NVFS 552



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 42/431 (9%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           + + LF Q   S     D  +L + ++A ++L+      QLHA+ ++        V N +
Sbjct: 272 EGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNAL 331

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +++Y     + +  ++F  +   DV SW T +SA  + G  D A  +F +M  +DL V +
Sbjct: 332 IAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDS 391

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSG 218
             +T                            S AS L   D      G+Q H  + ++G
Sbjct: 392 VTVTALL-------------------------SAASDLRNPD-----IGKQTHGYLLRNG 421

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
                 + + LI MY   G +  A  VFE++  +  D  ++N MM G    G V++A + 
Sbjct: 422 IQ-FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 480

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
            R ML   + P+ +T  S++ AC        G Q+H  ++++  +    V+ A I MYS 
Sbjct: 481 LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSK 540

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
            G I  A  +F++  EK IV+++TMI  Y Q  +G SA+  +  MQ  GI+PD  T  ++
Sbjct: 541 SGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAV 600

Query: 396 LASSGFIEMV-EMIHAFVFINGIITNIQVSNALISAYA----KNERIKQAYQIFHNMSPR 450
           L++  +  +V E +  F  +   + NIQ S       A    +  R+ +AY+    +  +
Sbjct: 601 LSACSYAGLVDEGLQIFESMR-TVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEK 659

Query: 451 -NIIT-WNTLI 459
            N++  W +L+
Sbjct: 660 GNVMEIWGSLL 670



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)

Query: 34  SGHYQDAL----HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SG+ Q+ L     L ++     K+ P++ +L++ L AC       +G QLH +++R  L 
Sbjct: 466 SGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLD 525

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VA  ++ +Y                               +K G + +A  VF K 
Sbjct: 526 QNVFVATALIDMY-------------------------------SKSGSIAHAENVFSKA 554

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
            ++ +  Y+ MI G  ++G  +  + +F  M K  ++ D  +  +VLS C  AGL++ G 
Sbjct: 555 NEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGL 614

Query: 209 QL 210
           Q+
Sbjct: 615 QI 616


>gi|302766259|ref|XP_002966550.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
 gi|300165970|gb|EFJ32577.1| hypothetical protein SELMODRAFT_399 [Selaginella moellendorffii]
          Length = 732

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 199/688 (28%), Positives = 337/688 (48%), Gaps = 60/688 (8%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           + N ++ GH      L  +      ++P++ ++   L AC    N   G Q+H Y L AG
Sbjct: 91  IGNFAQYGHLGRESVLLFRKMELEGIRPNLITMVAVLRAC----NLTDGRQVHGYVLEAG 146

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           +     + N ++ +Y    D+     V  E+   DV SW                     
Sbjct: 147 MSLDTSLGNALVDMYCKTGDVDEADLVLREMPKRDVISW--------------------- 185

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEF 206
                     N MI+G  ++G    G+     M +  +     ++A++L+ C +G  L  
Sbjct: 186 ----------NIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGE 235

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD----ACKVFEEAKGYVCDHISYNVM 262
           G+ +H  V   G      V + L+ MY  CG++ D    +C+V E       + I++N +
Sbjct: 236 GKSIHRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHER------NTIAWNTI 289

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           +   A      +AL  F+ M +  ++   +TFV ++  C  P     G  +H    + GF
Sbjct: 290 IGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLMLGTCSSPAHLAQGILLHDWISQLGF 349

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           E+   V N+   MY+ CG +D A  +F  +  ++ VSWN++IS   Q      A   +  
Sbjct: 350 ESII-VHNSLTAMYAKCGSLDAARKMFEGMPSRNSVSWNSLISAAIQHGCYADAHKFFQR 408

Query: 380 MQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M+  G RPDE T  S+L         +    IH  V  +G      V+NALI  YAK   
Sbjct: 409 MKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMVVESGFDKRTGVANALIFMYAKLGD 468

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            + A  +F  M+ RN ++WNT++  ++  G     ++ F ++   ++  D+ T   AL +
Sbjct: 469 HEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAVEMFWKM---DVARDKVTYVAALDA 525

Query: 497 CARIS-SLRHGKQIHGYVLKNNLISKMSL--GNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           C+ ++  L HGK IHGY+L +   +++      A++ +Y KCG L  + ++F+ M+ +D 
Sbjct: 526 CSGLAGGLAHGKLIHGYMLDHGFSNRLDTVAATALVNMYGKCGSLQEARKIFDEMLHRDV 585

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           ++W +LI AYAQH E ++A+   K M+  G +K D   F ++LS C H+GL+++G + F 
Sbjct: 586 VTWTSLIVAYAQHSEIEQALKLVKIMEQDG-VKVDDVVFLSILSGCDHSGLLEEGCKYFV 644

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNL 673
           SM++DYG  P  +H +C++D+LGRAG+LD AE++++    ++ S  W  L +AC  HGN 
Sbjct: 645 SMIDDYGISPRLEHYNCIIDVLGRAGHLDLAEKLVDRLPSRSDSKVWMTLLAACRMHGNP 704

Query: 674 RLGRIIAGLLLEREQDKPSVYVLLSNIY 701
             G+  A  +   +   P+ YV+LSNIY
Sbjct: 705 ERGKRAARRITLLDPSIPAAYVVLSNIY 732



 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 191/684 (27%), Positives = 334/684 (48%), Gaps = 59/684 (8%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+ ++     ++PD  +  T L AC        G ++HAY   +GL+   + AN ++
Sbjct: 2   ALELYKRMQL-EGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           ++Y   R      ++FS +++P+V SWT+ +    + GH+                    
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHL-------------------- 100

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGF 219
                   G E   + LFR+M    +R +  +  +VL  C+   L  GRQ+H  V ++G 
Sbjct: 101 --------GRE--SVLLFRKMELEGIRPNLITMVAVLRACN---LTDGRQVHGYVLEAGM 147

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
           S   S+ NAL+ MY   G+V +A  V  E      D IS+N+M+ G A  G  +E L   
Sbjct: 148 SLDTSLGNALVDMYCKTGDVDEADLVLREMPKR--DVISWNIMISGYAQSGDCKEGLRCL 205

Query: 280 RDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
             M    L P+++T+ ++++AC        G  +H   +  G +    V +  + MY  C
Sbjct: 206 WRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSIHRSVVDMGLDRDEVVKSFLLGMYGKC 265

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           G +++       + E++ ++WNT+I  YA+ +    A+ ++ +MQ  G++ D  TF  +L
Sbjct: 266 GSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDHFQALRSFQQMQLQGVKADAVTFVLML 325

Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
              +S   +    ++H ++   G   +I V N+L + YAK   +  A ++F  M  RN +
Sbjct: 326 GTCSSPAHLAQGILLHDWISQLGF-ESIIVHNSLTAMYAKCGSLDAARKMFEGMPSRNSV 384

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +WN+LI+  + +G      + F  + +   RPDE T    L +C + ++ + G  IH  V
Sbjct: 385 SWNSLISAAIQHGCYADAHKFFQRMKLEGSRPDEVTCISMLDACTKQANAKEGSSIHQMV 444

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           +++    +  + NA+I +YAK GD + +  VF+ M E++T+SWN +++AY + G  ++AV
Sbjct: 445 VESGFDKRTGVANALIFMYAKLGDHEAARNVFDAMAERNTVSWNTILAAYVEKGLNRDAV 504

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSH-AGLVDDGTRIFDSMVNDYGFIPAEDHL--SC 630
             F  M DV R   D+ T+ A L ACS  AG +  G  I   M+ D+GF    D +  + 
Sbjct: 505 EMFWKM-DVAR---DKVTYVAALDACSGLAGGLAHGKLIHGYML-DHGFSNRLDTVAATA 559

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           ++++ G+ G L EA ++ + + +      W +L  A A H  +     +  ++   EQD 
Sbjct: 560 LVNMYGKCGSLQEARKIFD-EMLHRDVVTWTSLIVAYAQHSEIEQALKLVKIM---EQDG 615

Query: 691 PSV--YVLLSNIYAA--AGLWEEA 710
             V   V LS +     +GL EE 
Sbjct: 616 VKVDDVVFLSILSGCDHSGLLEEG 639



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 13/404 (3%)

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAI 330
           +AL  ++ M +  +RP  +TFV+ + AC        G +VHA   +SG E     +NA I
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVGIRPDE 389
            MY  C   ++A  +F+R++  ++VSW ++I  +AQ  +LGR ++L + +M+  GIRP+ 
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEGIRPNL 120

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            T  ++L +    +  + +H +V   G+  +  + NAL+  Y K   + +A  +   M  
Sbjct: 121 ITMVAVLRACNLTDGRQ-VHGYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVLREMPK 179

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           R++I+WN +I+G+  +G   +GL+    +    L P + T +  L++C+    L  GK I
Sbjct: 180 RDVISWNIMISGYAQSGDCKEGLRCLWRMQQDGLSPTKVTYATLLNACSSGEDLGEGKSI 239

Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
           H  V+   L     + + ++ +Y KCG L+   R    + E++TI+WN +I AYA++ + 
Sbjct: 240 HRSVVDMGLDRDEVVKSFLLGMYGKCGSLEDVKRSSCEVHERNTIAWNTIIGAYARYSDH 299

Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF--IPAEDH 627
            +A+  F+ MQ  G +K D  TF  +L  CS    +  G  + D  ++  GF  I   + 
Sbjct: 300 FQALRSFQQMQLQG-VKADAVTFVLMLGTCSSPAHLAQGILLHD-WISQLGFESIIVHNS 357

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
           L+ M     + G LD A ++      +  S +W +L SA   HG
Sbjct: 358 LTAM---YAKCGSLDAARKMFEGMPSR-NSVSWNSLISAAIQHG 397



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 12/210 (5%)

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
           Q L+ +  + +  +RPD  T    L +C    +L  G+++H Y+ ++ L + +   NA+I
Sbjct: 1   QALELYKRMQLEGVRPDSVTFVTCLRACTVEGALDDGRKVHAYIRESGLETDIYAANALI 60

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE-GKEAVSCFKAMQDVGRIKPD 588
            +Y KC   + + ++F+ M   + +SW ++I  +AQ+G  G+E+V  F+ M+  G I+P+
Sbjct: 61  NMYGKCRSPEDAFQLFSRMESPNVVSWTSVIGNFAQYGHLGRESVLLFRKMELEG-IRPN 119

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
             T  AVL AC+    + DG ++    V + G        + ++D+  + G +DEA+ V+
Sbjct: 120 LITMVAVLRACN----LTDGRQVH-GYVLEAGMSLDTSLGNALVDMYCKTGDVDEADLVL 174

Query: 649 NSQHIQARSD--NWWALFSACAAHGNLRLG 676
                  + D  +W  + S  A  G+ + G
Sbjct: 175 RE---MPKRDVISWNIMISGYAQSGDCKEG 201


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 216/698 (30%), Positives = 348/698 (49%), Gaps = 37/698 (5%)

Query: 49  SSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
           SS ++K D Y+ S+ L ACA+ RN   G  +HA+ LR  +     V N++L++Y      
Sbjct: 88  SSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSST 147

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
               ++ S              S C      D   +VFD M  R +  +N +I       
Sbjct: 148 TPDGKMVSG------------YSRC------DLVRKVFDTMRKRTVVAWNTLIAWYVRTE 189

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCL--VSV 225
                +  F  M K+ ++    SF +V     + G  +    +H ++ K G   +  + V
Sbjct: 190 RYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYV 249

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG-RVEEALIRFRDMLV 284
           V++ I MY   G +  A KVF+       +   +N M+         +E   + F+ +  
Sbjct: 250 VSSAIFMYAELGCLEFAKKVFDNCLERNTE--VWNTMISAFVQNNFSLEGIQLFFQAVES 307

Query: 285 ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
                 E+T +S +SA    +   +  Q+HA  +K+       V NA I MYS C  ID 
Sbjct: 308 EDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDT 367

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           +  IF  + EKD+VSWNTMIS + Q  L   A++ + EM+   +  D  T  +LL+++  
Sbjct: 368 SFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASD 427

Query: 402 I---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWN 456
           +   ++ +  H ++  NGI     + + LI  YAK+  I+ A  +F       R+  TWN
Sbjct: 428 LRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 486

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++++G+  NG   Q      ++L  ++ P+  TL+  L +C     +  GKQ+HG+ ++N
Sbjct: 487 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 546

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
           +L   + +  A+I +Y+K G +  +  VF+   EK  ++++ +I  Y QHG G+ A+  F
Sbjct: 547 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 606

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             MQ  G I+PD  T  AVLSACS+AGLVD+G +IF+SM   Y   P+ +H  C+ D+LG
Sbjct: 607 HRMQKSG-IQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLG 665

Query: 637 RAGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ--DKPSV 693
           RAG +D+A E VI         + W +L +AC  H    LG+++A  LLE E+   K   
Sbjct: 666 RAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLLEMEKINGKTGY 725

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +VLLSNIYA    WE    +R+ ++  G+ K+ G SWI
Sbjct: 726 HVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 763



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 156/561 (27%), Positives = 281/561 (50%), Gaps = 40/561 (7%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           NP + +    LS   + G +  A ++FD +P     ++N +I G   N + D  +  +  
Sbjct: 25  NPKIPTIRYRLSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSN 84

Query: 180 MHK--LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
           M      V+ D+Y+++SVL  C D   L  G+ +H+   +   +    V N+L+ MY  C
Sbjct: 85  MKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMC 144

Query: 237 ------GNVVDA---C----KVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
                 G +V     C    KVF+  +      +++N ++       R  EA+ +F  M+
Sbjct: 145 SSTTPDGKMVSGYSRCDLVRKVFDTMRKRTV--VAWNTLIAWYVRTERYAEAVKQFSMMM 202

Query: 284 VASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGK 338
              ++PS ++FV+V  A       +    VH   +K G E      V ++AI MY+  G 
Sbjct: 203 KIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC 262

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLA 397
           ++ A  +F    E++   WNTMIS + Q N     I  + + ++S     DE T  S ++
Sbjct: 263 LEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAIS 322

Query: 398 SSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
           ++  +   E+ E +HAFV  N  +T + V NALI+ Y++   I  +++IF NM  +++++
Sbjct: 323 AASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVS 382

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           WNT+I+ F+ NG   + L  F E+   +L  D  T++  LS+ + + +   GKQ HGY+L
Sbjct: 383 WNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLL 442

Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI--EKDTISWNALISAYAQHGEGKEA 572
           +N  I    + + +I +YAK G ++ +  VF      E+D  +WN+++S Y Q+G   +A
Sbjct: 443 RNG-IQFEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQA 501

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD-SMVNDYG---FIPAEDHL 628
               + M D  ++ P+  T  ++L AC+ +G +D G ++   S+ ND     F+      
Sbjct: 502 FLILRQMLD-QKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVA----- 555

Query: 629 SCMLDLLGRAGYLDEAERVIN 649
           + ++D+  ++G +  AE V +
Sbjct: 556 TALIDMYSKSGSIAHAENVFS 576



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 42/431 (9%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           + + LF Q   S     D  +L + ++A ++L+      QLHA+ ++        V N +
Sbjct: 296 EGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNAL 355

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           +++Y     + +  ++F  +   DV SW T +SA  + G  D A  +F +M  +DL V +
Sbjct: 356 IAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDS 415

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSG 218
             +T                            S AS L   D      G+Q H  + ++G
Sbjct: 416 VTVTAL-------------------------LSAASDLRNPD-----IGKQTHGYLLRNG 445

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
                 + + LI MY   G +  A  VFE++  +  D  ++N MM G    G V++A + 
Sbjct: 446 IQ-FEGMDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLI 504

Query: 279 FRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
            R ML   + P+ +T  S++ AC        G Q+H  ++++  +    V+ A I MYS 
Sbjct: 505 LRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSK 564

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
            G I  A  +F++  EK IV+++TMI  Y Q  +G SA+  +  MQ  GI+PD  T  ++
Sbjct: 565 SGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAV 624

Query: 396 LASSGFIEMV-EMIHAFVFINGIITNIQVSNALISAYA----KNERIKQAYQIFHNMSPR 450
           L++  +  +V E +  F  +   + NIQ S       A    +  R+ +AY+    +  +
Sbjct: 625 LSACSYAGLVDEGLQIFESMR-TVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEK 683

Query: 451 -NIIT-WNTLI 459
            N++  W +L+
Sbjct: 684 GNVMEIWGSLL 694



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 36/182 (19%)

Query: 34  SGHYQDAL----HLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           SG+ Q+ L     L ++     K+ P++ +L++ L AC       +G QLH +++R  L 
Sbjct: 490 SGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLD 549

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
               VA  ++ +Y                               +K G + +A  VF K 
Sbjct: 550 QNVFVATALIDMY-------------------------------SKSGSIAHAENVFSKA 578

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGR 208
            ++ +  Y+ MI G  ++G  +  + +F  M K  ++ D  +  +VLS C  AGL++ G 
Sbjct: 579 NEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGL 638

Query: 209 QL 210
           Q+
Sbjct: 639 QI 640


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 150/444 (33%), Positives = 261/444 (58%), Gaps = 8/444 (1%)

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           + + ++AC+  R    G QVHA+ + + +     +    +TMY  CG +D+A  +  R+ 
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EM 407
           E+ +VSW TMIS Y+Q      A+  +++M   G  P+E+T  ++L S    + +   + 
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H+ +      +++ V ++L+  YAK+E I++A ++F  +  R++++   +I+G+   G 
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + L  F +L    ++ +  T +  +++ + ++SL +GKQ+H  +L+  L   ++L N+
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y+KCG L  S RVF+ M+E+  +SWNA++  Y +HG G E +S FK +     +KP
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK--EVKP 342

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D  T  AVLS CSH GLVD+G  IFD++V +   +    H  C++DLLGR+G L++A  +
Sbjct: 343 DSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNL 402

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +   ++    W +L  AC  H N+ +G ++A  LLE E +    YV+LSNIYAAAG+W
Sbjct: 403 IENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMW 462

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
           ++   +R+L+    V K+PG SWI
Sbjct: 463 KDVFKVRKLMLEKTVTKEPGQSWI 486



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 18/395 (4%)

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+ +    P V+  T  ++   + G +D A  V D+MP+R +  +  MI+G ++      
Sbjct: 67  RMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQTERHVE 126

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF +M +     + Y+ A+VL+ C      + G+Q+HSL+ K+ F   + V ++L+ 
Sbjct: 127 ALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLD 186

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY    N+ +A +VF+       D +S   ++ G A  G  EEAL  FR +    ++ + 
Sbjct: 187 MYAKSENIQEARRVFDTLPER--DVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNH 244

Query: 292 LTF---VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +TF   V+ +S       G QVHA  ++     + ++ N+ I MYS CGK+  +  +F  
Sbjct: 245 VTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDN 304

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EM 404
           + E+ +VSWN M+  Y +  LG   I  + ++    ++PD  T  ++L+     G + E 
Sbjct: 305 MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EVKPDSVTLLAVLSGCSHGGLVDEG 363

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           +++    V     + +      +I    ++ R+++A  +  NM   +  +    I G LL
Sbjct: 364 LDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTPS----IWGSLL 419

Query: 465 NGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
               V    H  EL+   + E+ P+     V LS+
Sbjct: 420 GACRVHANVHVGELVAQKLLEMEPENAGNYVILSN 454



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 144/276 (52%), Gaps = 38/276 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S++  + +AL LF+++  +  + P+ Y+L+T L +C+  ++   G Q+H+  ++  
Sbjct: 115 ISGYSQTERHVEALDLFIKMLRAGCI-PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTN 173

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +++  V +++L +Y  + ++   +RVF                               D
Sbjct: 174 FESHMFVGSSLLDMYAKSENIQEARRVF-------------------------------D 202

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
            +P+RD+    A+I+G  + G ++  + LFR+++   ++ ++ +F ++++   +GL  L+
Sbjct: 203 TLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTAL-SGLASLD 261

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           +G+Q+H+L+ +      V++ N+LI MY  CG ++ + +VF+         +S+N M+ G
Sbjct: 262 YGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSV--VSWNAMLMG 319

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
               G   E +  F+D L   ++P  +T ++V+S C
Sbjct: 320 YGRHGLGHEVISLFKD-LHKEVKPDSVTLLAVLSGC 354


>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 173/547 (31%), Positives = 288/547 (52%), Gaps = 57/547 (10%)

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A ++F+E      D +++N M+   + +G  ++AL  F  M +A+ RP   TF +
Sbjct: 19  GRITSARRLFDEMPHK--DTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTA 76

Query: 297 VMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC----------------- 336
            +SAC      R G ++HAQ + SG ++   V N+ I MY  C                 
Sbjct: 77  TLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMN 136

Query: 337 --------------GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
                         G  D A ++F  + +K  ++WN MIS Y Q       +  + +M+ 
Sbjct: 137 EVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMRE 196

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE-----MIHAFVFING------IITNI----QVS-NA 426
             ++PD++TF +L+  +   E+ E     M+H F+  +G      +  +I    QVS NA
Sbjct: 197 DSLQPDQWTFSALV--NALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNA 254

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           +I A+ K     +A+ +F     +N+++W ++I G+  NG   Q L  F +++ + ++PD
Sbjct: 255 MIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPD 314

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           ++T    L +C+ +++L HGK IHG ++     + + +GN ++ +YAKCGD+  S   F 
Sbjct: 315 DFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFK 374

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            ++ KD +SWNA++     HG   +A+  ++ M   G +KPD+ TF  +L  CSH+GL++
Sbjct: 375 EILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG-MKPDKVTFIGLLMTCSHSGLIE 433

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW--ALF 664
            G  +F+SMV+ YG     +H+ CM+DLLGR GYL +A  +++      R++     AL 
Sbjct: 434 KGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALL 493

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
            AC AH  +R+G  +   L   E  K   YVLLSN+Y  +G W+EA  +R+ +   GV K
Sbjct: 494 GACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKK 553

Query: 725 QPGCSWI 731
            PGCSWI
Sbjct: 554 MPGCSWI 560



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 219/438 (50%), Gaps = 22/438 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA+ S+ G +Q AL LF  +  ++  +PD ++ + TL+ACA L     G ++HA  +
Sbjct: 40  NAMLASYSQLGLHQQALCLFHHMRIANS-RPDRFTFTATLSACAGLGELRRGMKIHAQVV 98

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +G ++   V N+++ +Y       S +RVF E+   +  SW + L A T  G  D A  
Sbjct: 99  VSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARV 158

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
           VFD MP +    +N MI+G  + G  ++ +GLF++M +  ++ D ++F++++ ++C+   
Sbjct: 159 VFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQE 218

Query: 204 LEFGRQLHSLVTKSGFSCLVSVV-----------NALITMYFNCGNVVDACKVFEEAKGY 252
             +G  +H  + KSG+  ++ V            NA+I  +   G+  +A  VF+ A   
Sbjct: 219 PSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEK 278

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQ 309
             + +S+  M+ G A  G  E+AL  F  M+   ++P + TF +V+ AC        G  
Sbjct: 279 --NVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKM 336

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H   +  GF AY  V N  + MY+ CG I  +   F  +  KD+VSWN M+        
Sbjct: 337 IHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGH 396

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVE-MIHAFVFINGIITNIQVSN 425
              A+  Y EM + G++PD+ TF  LL +   SG IE  + +  + V + G+    +   
Sbjct: 397 ATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVV 456

Query: 426 ALISAYAKNERIKQAYQI 443
            ++    +   + QA ++
Sbjct: 457 CMVDLLGRGGYLAQAREL 474



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 215/436 (49%), Gaps = 51/436 (11%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           ++  T+ + A  K+G +  A  +FD+MP +D   +NAM+   ++ G     + LF  M  
Sbjct: 5   LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64

Query: 183 LDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            + R D ++F + LS C AGL E   G ++H+ V  SG    + V N+LI MY  C +  
Sbjct: 65  ANSRPDRFTFTATLSAC-AGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSAT 123

Query: 241 DACKVFEEAK------------GYVCD-----------------HISYNVMMDGLASVGR 271
            A +VFEE               Y                     I++N+M+ G    G 
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD 183

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQAMKSG-------FE 320
           VE  L  F+ M   SL+P + TF ++++A LC    P  GY +H   +KSG       FE
Sbjct: 184 VELCLGLFKKMREDSLQPDQWTFSALVNA-LCELQEPSYGYMMHGFIIKSGWDDVMKVFE 242

Query: 321 A---YTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +    T VS NA I  +   G   EA ++F    EK++VSW +MI+ YA+   G  A+  
Sbjct: 243 SIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSF 302

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAK 433
           +++M    I+PD+FTFG++L +   +  +   +MIH  +   G    + V N L++ YAK
Sbjct: 303 FVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAK 362

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              I+ +   F  +  +++++WN ++ G  ++G   Q L+ + E++ S ++PD+ T    
Sbjct: 363 CGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGL 422

Query: 494 LSSCARISSLRHGKQI 509
           L +C+    +  G+ +
Sbjct: 423 LMTCSHSGLIEKGQAL 438



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 175/359 (48%), Gaps = 47/359 (13%)

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           + + I   +  G+I  A  +F  +  KD V+WN M+++Y+Q  L + A+  +  M+    
Sbjct: 8   TTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANS 67

Query: 386 RPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPD FTF  +L A +G  E+     IHA V ++G  +++ V N+LI  Y K      A +
Sbjct: 68  RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARR 127

Query: 443 IFHNMS------------------------------PRNI-ITWNTLINGFLLNGFPVQG 471
           +F  MS                              P+ + I WN +I+G+   G     
Sbjct: 128 VFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELC 187

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM----SLG-- 525
           L  F ++    L+PD++T S  +++   +    +G  +HG+++K+     M    S+G  
Sbjct: 188 LGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGIL 247

Query: 526 -----NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
                NAMI  + K GD   +  VF +  EK+ +SW ++I+ YA++G G++A+S F  M 
Sbjct: 248 TQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMM 307

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +   I+PD  TF AVL ACS    +  G  I  S+++ YGF    D  + ++++  + G
Sbjct: 308 E-NHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIH-YGFHAYVDVGNGLVNMYAKCG 364


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  305 bits (782), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 188/576 (32%), Positives = 295/576 (51%), Gaps = 45/576 (7%)

Query: 189 NYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM--YFNCGNVVDACKVF 246
           N+   ++LS C +   +  +Q+HS + K+G       ++ LI        GN+  A  +F
Sbjct: 32  NHPSLTLLSTCKS--FQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLF 89

Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---C 303
           E  +    +   +N M+ G +       A+  +  ML+  + P+  TF  ++ +C     
Sbjct: 90  ESIEQ--PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGA 147

Query: 304 PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI------------------------ 339
            + G Q+H   +K G E+   V  + I MY+  G++                        
Sbjct: 148 TQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITG 207

Query: 340 -------DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
                  D+A  +F  +  +D VSWN MI+ YAQ      A+  + EM+   + P+E T 
Sbjct: 208 YTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 393 GSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
            ++L   A SG +E+   + +++  +G+ +N+++ NALI  Y+K   + +A  +F  +  
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
           ++II+WN +I G+       + L  F ++  S + P++ T    L +CA + +L  GK I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 510 HGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           H Y+ K  L ++  SL  ++I +YAKCG+++ + +VF  M  K   SWNA+IS  A HG 
Sbjct: 388 HAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGH 447

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
              A+  F+ M+D G  +PD  TF  VLSACSHAGLV+ G + F SMV DY   P   H 
Sbjct: 448 ANMALELFRQMRDEG-FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHY 506

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
            CM+DLLGRAG  DEAE ++ +  ++     W +L  AC  HGN+ LG   A  L E E 
Sbjct: 507 GCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEP 566

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           + P  YVLLSNIYA AG W++ A IR  L   G+ K
Sbjct: 567 ENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 169/591 (28%), Positives = 285/591 (48%), Gaps = 62/591 (10%)

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS------ACTKMGHVDYACEVF 146
           H + T+LS  K+ ++L   K++ S+I    +++    LS      A +  G++ YA  +F
Sbjct: 33  HPSLTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLF 89

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLE 205
           + +   +  ++N MI G + +      I  +  M    V  ++Y+F  +L  C   G  +
Sbjct: 90  ESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQ 149

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV------------------------- 240
            G+Q+H  V K G      V  +LI MY   G +                          
Sbjct: 150 EGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYT 209

Query: 241 ------DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
                 DA ++FEE    V D +S+N M+ G A  GR EEAL  F++M  A++ P+E T 
Sbjct: 210 LRGCLDDARRLFEEIP--VRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTM 267

Query: 295 VSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+V+SAC       +G  V +     G  +   + NA I MYS CG +D+A  +F  + E
Sbjct: 268 VTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICE 327

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMI 408
           KDI+SWN MI  Y+  N  + A+  + +MQ   + P++ TF S+L +    G +++ + I
Sbjct: 328 KDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWI 387

Query: 409 HAFV---FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           HA++   F+   +TN  +  +LI  YAK   I+ A Q+F  M P+++ +WN +I+G  ++
Sbjct: 388 HAYIDKKFLG--LTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMH 445

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSL 524
           G     L+ F ++      PD+ T    LS+C+    +  G+Q    ++++  IS K+  
Sbjct: 446 GHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQH 505

Query: 525 GNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
              MI L  + G  D +  +  NM ++ D   W +L+ A   HG  +  +  F A + + 
Sbjct: 506 YGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVE--LGEFAA-KHLF 562

Query: 584 RIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
            ++P+      +LS   + AG  DD  RI  + +ND G    +D +  MLD
Sbjct: 563 ELEPENPGAYVLLSNIYATAGRWDDVARI-RTKLNDKGMKKXQD-IYKMLD 611



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 228/458 (49%), Gaps = 22/458 (4%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+ Y+    L +CA +     G Q+H + L+ GL++ P V  +++++Y    +L   +
Sbjct: 128 VEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAE 187

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
            VFS+    D  S+T  ++  T  G +D A  +F+++P RD   +NAMI G  ++G  + 
Sbjct: 188 LVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEE 247

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            +  F+EM + +V  +  +  +VLS C  +G LE G  + S +   G    + +VNALI 
Sbjct: 248 ALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALID 307

Query: 232 MYFNCGNVVDACKVFEEAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           MY  CG++  A  +FE     +C  D IS+NVM+ G + +   +EAL  FR M  +++ P
Sbjct: 308 MYSKCGDLDKARDLFEG----ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEP 363

Query: 290 SELTFVSVMSACL---CPRVGYQVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMI 345
           +++TFVS++ AC       +G  +HA   K       TS+  + I MY+ CG I+ A  +
Sbjct: 364 NDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQV 423

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
           FA ++ K + SWN MIS  A       A+  + +M+  G  PD+ TF  +L++     +V
Sbjct: 424 FAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483

Query: 406 EM----IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           E+      + V    I   +Q    +I    +     +A  +  NM  +     +  I G
Sbjct: 484 ELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP----DGAIWG 539

Query: 462 FLLNGFPVQG---LQHFSELLMSELRPDEYTLSVALSS 496
            LL    V G   L  F+   + EL P+     V LS+
Sbjct: 540 SLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSN 577



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 77/398 (19%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  ++SG +++AL  F ++  ++ + P+  ++ T L+ACA   +   GN + ++  
Sbjct: 233 NAMIAGYAQSGRFEEALAFFQEMKRAN-VAPNESTMVTVLSACAQSGSLELGNWVRSWIE 291

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL +   + N ++ +Y    DL   + +F  I   D+ SW                  
Sbjct: 292 DHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISW------------------ 333

Query: 145 VFDKMPDRDLPVYNAMITGCTE-NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AG 202
                        N MI G +  N Y++  + LFR+M + +V  ++ +F S+L  C   G
Sbjct: 334 -------------NVMIGGYSHMNSYKE-ALALFRKMQQSNVEPNDVTFVSILPACAYLG 379

Query: 203 LLEFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
            L+ G+ +H+ + K        S+  +LI MY  CGN+  A +VF   K       S+N 
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG--SWNA 437

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEA 321
           M+ GLA  G    AL  FR M      P ++TFV V+SAC         HA  ++ G + 
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSAC--------SHAGLVELGRQC 489

Query: 322 YTSVSNAAITMYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE- 379
           ++S+    +  Y    K+    CMI       D+              LGR+ +    E 
Sbjct: 490 FSSM----VEDYDISPKLQHYGCMI-------DL--------------LGRAGLFDEAEA 524

Query: 380 -MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVF 413
            M+++ ++PD   +GSLL +    G +E+ E     +F
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLF 562


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 199/617 (32%), Positives = 313/617 (50%), Gaps = 21/617 (3%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T+ L    ++G +  A +VFD++  RDL  +++++    ENG    G+ + R M    V 
Sbjct: 141 TSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVG 200

Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D+ +  SV   C   G L   + +H  V +   +   S+ N+LI MY  C  +  A  +
Sbjct: 201 PDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGM 260

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           FE           +  M+      G  EEA+  F+ M  + +  + +T +SV+  C C R
Sbjct: 261 FESVSDP--STACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVL--CCCAR 316

Query: 306 VGY-----QVHAQAMKSGFE-AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
           +G+      VH   ++   + A   +  A +  Y++C KI     +   +    +VSWNT
Sbjct: 317 LGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNT 376

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
           +IS YA+  L   A++ ++ M   G+ PD F+  S +   A +  +   + IH  V   G
Sbjct: 377 LISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRG 436

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
                 V N+L+  Y+K   +  AY IF  +  ++I+TWN +I GF  NG  V+ L+ F 
Sbjct: 437 FADEF-VQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFD 495

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           E+  + +  +E T   A+ +C+    L  GK IH  ++ + +   + +  A++ +YAKCG
Sbjct: 496 EMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCG 555

Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
           DL  +  VFN M EK  +SW+A+I+AY  HG+   A + F  M +   IKP++ TF  +L
Sbjct: 556 DLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVE-SHIKPNEVTFMNIL 614

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQ 654
           SAC HAG V++G   F+SM  DYG +P  +H + ++DLL RAG +D A  +I S  QHI 
Sbjct: 615 SACRHAGSVEEGKFYFNSM-RDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHID 673

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
           A    W AL + C  HG + L   I   L E   +    Y LLSNIYA  G W E+  +R
Sbjct: 674 A--SIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYAEGGNWYESRKVR 731

Query: 715 ELLKRTGVIKQPGCSWI 731
             ++  G+ K PG S I
Sbjct: 732 SRMEGMGLKKVPGYSSI 748



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 168/672 (25%), Positives = 319/672 (47%), Gaps = 56/672 (8%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           +C+ LR+ +   QLHA+ +  GL + P  +  +L  Y     L S + VF    +PD + 
Sbjct: 10  SCSTLRSLS---QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFM 66

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           +   +            C ++  + D+ + +Y+  I                ++  +L  
Sbjct: 67  FGVLIK-----------CYLWHHLFDQVVSLYHHHI----------------QKGSRL-T 98

Query: 186 RRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
           +   + + SV+ ++   G L  GR++H  + K+G      +  +L+ MY   G + DA K
Sbjct: 99  QNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARK 158

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC--- 301
           VF+E +  V D +S++ ++      GR  E L   R M+   + P  +T +SV  AC   
Sbjct: 159 VFDEIR--VRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKV 216

Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
            C R+   VH   ++       S+ N+ I MY  C  +  A  +F  + +     W +MI
Sbjct: 217 GCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMI 276

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVF---IN 415
           S+  Q      AI A+ +MQ   +  +  T  S+L   A  G+++  + +H F+    ++
Sbjct: 277 SSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMD 336

Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
           G   ++ +  AL+  YA   +I    ++   +   ++++WNTLI+ +   G   + +  F
Sbjct: 337 G--ADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLF 394

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             +L   L PD ++L+ ++S+CA  SS+R G+QIHG+V K     +  + N+++ +Y+KC
Sbjct: 395 VCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEF-VQNSLMDMYSKC 453

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           G +D +  +F+ + EK  ++WN +I  ++Q+G   EA+  F  M     +  ++ TF + 
Sbjct: 454 GFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMC-FNCMDINEVTFLSA 512

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQ 654
           + ACS++G +  G  I   +V     +  + ++ + ++D+  + G L  A+ V NS   +
Sbjct: 513 IQACSNSGYLLKGKWIHHKLV--VSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMP-E 569

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGLWEEAA 711
               +W A+ +A   HG +     +   ++E    KP+  V   NI +A   AG  EE  
Sbjct: 570 KSVVSWSAMIAAYGIHGQITAATTLFTKMVE-SHIKPN-EVTFMNILSACRHAGSVEEGK 627

Query: 712 NIRELLKRTGVI 723
                ++  G++
Sbjct: 628 FYFNSMRDYGIV 639



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/527 (24%), Positives = 240/527 (45%), Gaps = 43/527 (8%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           S  + PD  ++ +   AC  +        +H Y +R  +     + N+++ +Y     L 
Sbjct: 196 SEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYLR 255

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
             K +F  + +P    WT+ +S+C + G  + A + F KM + ++ V NA+         
Sbjct: 256 GAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEV-NAV--------- 305

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCL-VSVVN 227
                                +  SVL  C   G L+ G+ +H  + +       + +  
Sbjct: 306 ---------------------TMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGP 344

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           AL+  Y  C   + +C+      G     +S+N ++   A  G  EEA++ F  ML   L
Sbjct: 345 ALMDFYAACWK-ISSCEKLLCLIGN-SSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGL 402

Query: 288 RPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
            P   +  S +SAC      R G Q+H    K GF A   V N+ + MYS CG +D A  
Sbjct: 403 MPDSFSLASSISACAGASSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAYT 461

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           IF ++ EK IV+WN MI  ++Q  +   A+  + EM    +  +E TF S +   ++SG+
Sbjct: 462 IFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGY 521

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   + IH  + ++G+  ++ +  AL+  YAK   +K A  +F++M  +++++W+ +I  
Sbjct: 522 LLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAA 581

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           + ++G        F++++ S ++P+E T    LS+C    S+  GK     +    ++  
Sbjct: 582 YGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSMRDYGIVPN 641

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHG 567
                +++ L ++ GD+D +  +     +  D   W AL++    HG
Sbjct: 642 AEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHG 688



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 154/324 (47%), Gaps = 7/324 (2%)

Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           ++ +  +C   R   Q+HA  + +G  +    S   +  Y+  G +  + ++F      D
Sbjct: 4   YMPLFRSCSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPD 63

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE---FTFGSLLAS---SGFIEMVEM 407
              +  +I  Y   +L    +  Y      G R  +   F + S++ +    G + +   
Sbjct: 64  SFMFGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRK 123

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H  +   G+ T+  +  +L+  Y +   +  A ++F  +  R++++W++++  ++ NG 
Sbjct: 124 VHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGR 183

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           P +GL+    ++   + PD  T+     +C ++  LR  K +HGYV++  +    SL N+
Sbjct: 184 PREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNS 243

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +I +Y +C  L  +  +F  + +  T  W ++IS+  Q+G  +EA+  FK MQ+   ++ 
Sbjct: 244 LIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQE-SEVEV 302

Query: 588 DQATFTAVLSACSHAGLVDDGTRI 611
           +  T  +VL  C+  G + +G  +
Sbjct: 303 NAVTMISVLCCCARLGWLKEGKSV 326



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 184/402 (45%), Gaps = 63/402 (15%)

Query: 10  IAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACAN 69
           + GNS+     ++  N  ++  +R G  ++A+ LFV +     L PD +SL+++++ACA 
Sbjct: 365 LIGNSS-----VVSWNTLISIYAREGLNEEAMVLFVCMLEK-GLMPDSFSLASSISACAG 418

Query: 70  LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF 129
             +  FG Q+H +  + G  A   V N+++ +Y                           
Sbjct: 419 ASSVRFGQQIHGHVTKRGF-ADEFVQNSLMDMY--------------------------- 450

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
               +K G VD A  +FDK+ ++ +  +N MI G ++NG     + LF EM    +  + 
Sbjct: 451 ----SKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINE 506

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
            +F S +  C ++G L  G+ +H  +  SG    + +  AL+ MY  CG++  A  VF  
Sbjct: 507 VTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNS 566

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY 308
                   +S++ M+      G++  A   F  M+ + ++P+E+TF++++SAC       
Sbjct: 567 MPEKSV--VSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACR------ 618

Query: 309 QVHAQAMKSG------FEAYTSVSNAA-----ITMYSSCGKIDEAC-MIFARLQEKDIVS 356
             HA +++ G         Y  V NA      + + S  G ID A  +I +  Q  D   
Sbjct: 619 --HAGSVEEGKFYFNSMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASI 676

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS 398
           W  +++    R  GR  ++  +  +   IR ++  + +LL++
Sbjct: 677 WGALLN--GCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSN 716


>gi|110741296|dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 190/536 (35%), Positives = 286/536 (53%), Gaps = 26/536 (4%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L     +S  V + N LI MY  CGN++ A +VF+       + +S+  ++ G    G
Sbjct: 84  HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPER--NVVSWTALITGYVQAG 141

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
             +E    F  ML     P+E T  SV+++C     G QVH  A+K G      V+NA I
Sbjct: 142 NEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVI 199

Query: 331 TMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           +MY  C       EA  +F  ++ K++V+WN+MI+ +   NLG+ AI  ++ M S G+  
Sbjct: 200 SMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259

Query: 388 DEFTF----GSLLASSGFI-----EMVEMIHAFVFINGIITNIQVSNALISAYAKN-ERI 437
           D  T      SL  SS  +     +    +H+    +G++T  +V+ ALI  Y++  E  
Sbjct: 260 DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDY 319

Query: 438 KQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
              Y++F  MS  R+I+ WN +I  F +   P + +  F +L   +L PD YT S  L +
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKA 378

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA + + RH   IH  V+K   ++   L N++I  YAKCG LD  +RVF+ M  +D +SW
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N+++ AY+ HG+    +  F+ M     I PD ATF A+LSACSHAG V++G RIF SM 
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMD----INPDSATFIALLSACSHAGRVEEGLRIFRSMF 494

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
                +P  +H +C++D+L RA    EAE VI    +   +  W AL  +C  HGN RLG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554

Query: 677 RIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEA-ANIRELLKRTGVIKQPGCSW 730
           ++ A  L E  +   S+ Y+ +SNIY A G + EA  +I+E ++   V K+P  SW
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE-METWRVRKEPDLSW 609



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 259/566 (45%), Gaps = 69/566 (12%)

Query: 28  LANLSRSGHYQDALHLF----VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           L  L RSG  + A+ LF    V++ S         + +    ACA  RN   G  LH + 
Sbjct: 33  LRTLVRSGDIRRAVSLFYSAPVELQSQQ-------AYAALFQACAEQRNLLDGINLHHHM 85

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L      Y +  N IL+ +                           ++   K G++ YA 
Sbjct: 86  LS---HPYCYSQNVILANF--------------------------LINMYAKCGNILYAR 116

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD MP+R++  + A+ITG  + G E  G  LF  M       + ++ +SVL+ C    
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTLSSVLTSCR--- 172

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN---VVDACKVFEEAKGYVCDHISYN 260
            E G+Q+H L  K G  C + V NA+I+MY  C +     +A  VFE  K    + +++N
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK--FKNLVTWN 230

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCP----RVGYQVH 311
            M+         ++A+  F  M    +     T +++ S+      L P    +   Q+H
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-IFARLQE-KDIVSWNTMISTYAQRNL 369
           +  +KSG    T V+ A I +YS   +    C  +F  +   +DIV+WN +I+ +A  + 
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP 350

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVEM--IHAFVFINGIITNIQVSNA 426
            R AI  + +++   + PD +TF S+L A +G +       IHA V   G + +  ++N+
Sbjct: 351 ER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI AYAK   +    ++F +M  R++++WN+++  + L+G     L  F ++   ++ PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             T    LS+C+    +  G +I   +  K   + +++    +I + ++      +  V 
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526

Query: 546 NMM-IEKDTISWNALISAYAQHGEGK 570
             M ++ D + W AL+ +  +HG  +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTR 552


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 177/591 (29%), Positives = 301/591 (50%), Gaps = 54/591 (9%)

Query: 192 FASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +AS+L  C     L  G Q+H+ +  +G      + + L+ +Y   G V DA ++F++  
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
               +  S+  +M+    +G  EE +  F  M+   +RP    F  V  AC      RVG
Sbjct: 73  ER--NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 130

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             V+   +  GFE  + V  + + M+  CG++D A   F  ++ KD+  WN M+S Y  +
Sbjct: 131 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 190

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAF-VFINGIITNIQV 423
              + A+  + +M   G++P+  T  S +++   + ++     IH + + +  + +++ V
Sbjct: 191 GEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 250

Query: 424 SNALISAYAKN-------------------------------------------ERIKQA 440
            N+L+  YAK                                            +R+  A
Sbjct: 251 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIA 310

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
             +F  +S R+++ WN++I+    +G  V  L    E+ +S +  +  T+  AL +C+++
Sbjct: 311 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 370

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
           ++LR GK+IH ++++  L +   + N++I +Y +CG +  S R+F++M ++D +SWN +I
Sbjct: 371 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 430

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           S Y  HG G +AV+ F+  + +G +KP+  TFT +LSACSH+GL+++G + F  M  +Y 
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMG-LKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYA 489

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
             PA +  +CM+DLL RAG  +E    I     +  +  W +L  AC  H N  L    A
Sbjct: 490 MDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAA 549

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             L E E      YVL++NIY+AAG WE+AA IR L+K  GV K PGCSWI
Sbjct: 550 RYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 600



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 127/567 (22%), Positives = 232/567 (40%), Gaps = 88/567 (15%)

Query: 55  PD--IYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           PD  I   ++ L  C  L N   G Q+HA  +  G+     + + +L +Y     +   +
Sbjct: 6   PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+F ++   +V+SWT  +     +G                               YE+ 
Sbjct: 66  RMFDKMSERNVFSWTAIMEMYCGLGD------------------------------YEET 95

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            I LF  M    VR D++ F  V   C +      G+ ++  +   GF     V  +++ 
Sbjct: 96  -IKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 154

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           M+  CG +  A + FEE +    D   +N+M+ G  S G  ++AL  FR M++  ++P+ 
Sbjct: 155 MFIKCGRMDIARRFFEEIE--FKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNS 212

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMK-SGFEAYTSVSNAAITMYSSC----------G 337
           +T  S +SAC      R G ++H   +K    ++   V N+ +  Y+ C          G
Sbjct: 213 ITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFG 272

Query: 338 KIDE---------------------------------ACMIFARLQEKDIVSWNTMISTY 364
            I +                                 AC +F+ L  +D+V WN++IS  
Sbjct: 273 MIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISAC 332

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
           AQ     +A+    EM    +  +  T  S L +   +  +     IH F+   G+ T  
Sbjct: 333 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 392

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
            + N+LI  Y +   I+++ +IF  M  R++++WN +I+ + ++GF +  +  F +    
Sbjct: 393 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 452

Query: 482 ELRPDEYTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDC 540
            L+P+  T +  LS+C+    +  G K       +  +   +     M+ L ++ G  + 
Sbjct: 453 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 512

Query: 541 SLRVFNMM-IEKDTISWNALISAYAQH 566
           +L     M  E +   W +L+ A   H
Sbjct: 513 TLEFIEKMPFEPNAAVWGSLLGACRIH 539



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 35/395 (8%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G Y++ + LF  +  +  ++PD +       AC+ L+N   G  ++ Y L  G +    V
Sbjct: 90  GDYEETIKLFY-LMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCV 148

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM----- 149
             +IL ++     +   +R F EI+  DV+ W   +S  T  G    A  VF KM     
Sbjct: 149 KGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGV 208

Query: 150 PDRDLPVYNAMITGCT-----ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
               + + +A ++ CT      +G E  G  +  E    D+   N S     + C +  +
Sbjct: 209 KPNSITIASA-VSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN-SLVDYYAKCRS--V 264

Query: 205 EFGRQLHSLVTKS---GFSCLVSVVNALITMYFNCGNVVD-------ACKVFEEAKGYVC 254
           E  R+   ++ ++    ++ +++V     T Y +    ++       AC VF E      
Sbjct: 265 EVARRKFGMIKQTDLVSWNAMLAVTG--FTQYGDGKAALEFFQRMHIACSVFSELSTR-- 320

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVH 311
           D + +N ++   A  GR   AL   R+M ++++  + +T VS + AC      R G ++H
Sbjct: 321 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 380

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
              ++ G +    + N+ I MY  CG I ++  IF  + ++D+VSWN MIS Y     G 
Sbjct: 381 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 440

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
            A+  + + +++G++P+  TF +LL++   SG IE
Sbjct: 441 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIE 475



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 147/291 (50%), Gaps = 17/291 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI ++  +  G ++ AL++F ++     +KP+  ++++ ++AC NL     G ++H Y +
Sbjct: 181 NIMVSGYTSKGEFKKALNVFRKM-VLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 239

Query: 85  RA-GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC--TKMG---- 137
           +   L +   V N+++  Y   R +   +R F  I+  D+ SW   L+    T+ G    
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299

Query: 138 ------HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
                  +  AC VF ++  RD+ V+N++I+ C ++G     + L REM+  +V  +  +
Sbjct: 300 ALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 359

Query: 192 FASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
             S L  C     L  G+++H  + + G      ++N+LI MY  CG++  + ++F+   
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
               D +S+NVM+      G   +A+  F+      L+P+ +TF +++SAC
Sbjct: 420 QR--DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSAC 468



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 4/169 (2%)

Query: 480 MSELRPDEYTLSVA--LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           M    PDE     A  L  C ++ +LR G Q+H  ++ N +     LG+ ++ +Y + G 
Sbjct: 1   MDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGC 60

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ + R+F+ M E++  SW A++  Y   G+ +E +  F  M + G ++PD   F  V  
Sbjct: 61  VEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG-VRPDHFVFPKVFK 119

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           ACS       G  ++D M++  GF         +LD+  + G +D A R
Sbjct: 120 ACSELKNYRVGKDVYDYMLS-IGFEGNSCVKGSILDMFIKCGRMDIARR 167



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/195 (21%), Positives = 89/195 (45%), Gaps = 33/195 (16%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           S  S   ++  N  ++  ++SG   +AL L  +++ S+ ++ +  ++ + L AC+ L   
Sbjct: 315 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN-VEVNTVTMVSALPACSKLAAL 373

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G ++H + +R GL     + N+++ +Y     +   +R+F                  
Sbjct: 374 RQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIF------------------ 415

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
                        D MP RDL  +N MI+    +G+    + LF++   + ++ ++ +F 
Sbjct: 416 -------------DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFT 462

Query: 194 SVLSVCD-AGLLEFG 207
           ++LS C  +GL+E G
Sbjct: 463 NLLSACSHSGLIEEG 477


>gi|302801912|ref|XP_002982712.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
 gi|300149811|gb|EFJ16465.1| hypothetical protein SELMODRAFT_116683 [Selaginella moellendorffii]
          Length = 734

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 205/687 (29%), Positives = 348/687 (50%), Gaps = 53/687 (7%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +RSG  ++AL LF ++     + P+ +  ++ LAACA L +   G ++H    
Sbjct: 84  NLMISGYARSGKNREALELFHKM----DIPPNGFIFASALAACAGLGDLEQGREIH---- 135

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
                        +L     A D+V        +QN    S  T  + C   G V    +
Sbjct: 136 -----------KRVLESRSIASDVV--------VQN----SLVTMYARC---GSVLEGIK 169

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +FD MP ++L  +NAMI+   +  Y +  + L+  M +  +  + + FAS+L+ C + G 
Sbjct: 170 IFDAMPRKNLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGN 229

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L+ G  +H  +T  G    + + NALI MY  CG + +A +VF        D  ++  M+
Sbjct: 230 LQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATR--DVFTWTSMI 287

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G A +G   EA   +  M    + P+  TFV+++SAC     G  +H +    GFE+ T
Sbjct: 288 AGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGFESIT 347

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  A + MYS CG +++A  +FA++Q+KD VSW+ M++++AQ      A+  + +M   
Sbjct: 348 VVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQMILE 407

Query: 384 GIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G++    TF S L +        + + I   +  +GI     +   L+SAY+K   +++A
Sbjct: 408 GMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGDMEEA 467

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +IF  M  R+++TW  +I G+   G     L+ F  +    + PD  T S  L +C   
Sbjct: 468 RKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEGVEPDSVTFSSVLQAC--- 524

Query: 501 SSLRHGKQIHGYVLKNNLISKMS--LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
           S+L  G+++H  +L      KMS  LGN +I +YA+CG +  + ++F  M     ISW+A
Sbjct: 525 SNLEDGREVHARILAAQ-GGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRISWSA 583

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +++  A+HG+  + +  ++ M + G + PD  T  A+L++CSHAGL D+    F  +++D
Sbjct: 584 IMTLCARHGQHDDIIDTYRLMVNEG-VVPDGVTLIAILNSCSHAGLTDEACHYFTWIISD 642

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHGNLRLG 676
           +     ++H  CM+DLL RAG LDEAE +I+   +  R D      + +AC    +L  G
Sbjct: 643 FELPHLDEHYQCMVDLLCRAGRLDEAEELIS---MIDRPDVVTLNTMLAACKNQQDLHRG 699

Query: 677 RIIAGLLLEREQDKPSVYVLLSNIYAA 703
              A   ++  +   + +VLLS IYA 
Sbjct: 700 ARTAA-QMQSTESCAAPFVLLSQIYAG 725



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/615 (26%), Positives = 300/615 (48%), Gaps = 48/615 (7%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L  C + RN + G +LH    R+G     ++   ++ +Y                     
Sbjct: 21  LQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMY--------------------- 59

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                      K G +  A   FD++ D++  V+N MI+G   +G     + LF   HK+
Sbjct: 60  ----------AKCGCLADAKAAFDEIADKNDFVWNLMISGYARSGKNREALELF---HKM 106

Query: 184 DVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVV 240
           D+  + + FAS L+ C AGL  LE GR++H  V +S   +  V V N+L+TMY  CG+V+
Sbjct: 107 DIPPNGFIFASALAAC-AGLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVL 165

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +  K+F+       + +S+N M+         E+AL  +  M    L P+   F S+++A
Sbjct: 166 EGIKIFDAMPRK--NLVSWNAMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTA 223

Query: 301 CLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           C      ++G  +H +    G +    + NA I MYS CG +DEA  +F+ L  +D+ +W
Sbjct: 224 CASLGNLQLGSSIHQRITSLGLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTW 283

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            +MI+ YAQ   G  A   Y  M+   + P   TF +LL++   +E  + +H  V   G 
Sbjct: 284 TSMIAGYAQLGFGSEAFAFYDRMRRDCVSPTSATFVALLSACSTLEQGKHLHEEVKAFGF 343

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            +   V  AL+  Y++   ++ A  +F  M  ++ ++W+ ++      G P + L  F +
Sbjct: 344 ESITVVETALMFMYSRCGSLEDAEFLFAKMQQKDYVSWSAMVTSHAQFGDPGKALTLFRQ 403

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +++  ++    T   AL +C+     R  K I   +  + +    S+   +++ Y+KCGD
Sbjct: 404 MILEGMQLSLPTFCSALQACSLKRDSRLSKTIRELIDWSGIDKMDSIRADLVSAYSKCGD 463

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           ++ + ++F+ M  +D ++W  +I  YAQ G+ K A+  F  M+  G ++PD  TF++VL 
Sbjct: 464 MEEARKIFDRMESRDVLTWTVMIKGYAQQGDSKAALELFHRMKPEG-VEPDSVTFSSVLQ 522

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACS+   ++DG  +   ++   G   ++   + ++++  R G + +A ++  S    +R 
Sbjct: 523 ACSN---LEDGREVHARILAAQGGKMSDFLGNGLINMYARCGSMRDARQIFESMDRSSRI 579

Query: 658 DNWWALFSACAAHGN 672
            +W A+ + CA HG 
Sbjct: 580 -SWSAIMTLCARHGQ 593



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 208/396 (52%), Gaps = 17/396 (4%)

Query: 285 ASLRPSELT-FVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
           A+L+ SE++ +  ++  C   R    G ++H    +SG+   + +    + MY+ CG + 
Sbjct: 7   AALKESEVSRYARLLQECCSRRNVSEGRRLHDDLRRSGYGDSSYLRRCVVQMYAKCGCLA 66

Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS- 399
           +A   F  + +K+   WN MIS YA+    R A+  + +M    I P+ F F S LA+  
Sbjct: 67  DAKAAFDEIADKNDFVWNLMISGYARSGKNREALELFHKMD---IPPNGFIFASALAACA 123

Query: 400 --GFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
             G +E    IH  V  +  I +++ V N+L++ YA+   + +  +IF  M  +N+++WN
Sbjct: 124 GLGDLEQGREIHKRVLESRSIASDVVVQNSLVTMYARCGSVLEGIKIFDAMPRKNLVSWN 183

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            +I+ F+   +P Q L+ +  +    L P+ +  +  L++CA + +L+ G  IH  +   
Sbjct: 184 AMISAFVQCDYPEQALELYHRMKRERLEPNGFVFASLLTACASLGNLQLGSSIHQRITSL 243

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L   + + NA+I +Y+KCG +D +L VF+ +  +D  +W ++I+ YAQ G G EA + +
Sbjct: 244 GLQRDIVMENALINMYSKCGCMDEALEVFSGLATRDVFTWTSMIAGYAQLGFGSEAFAFY 303

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
             M+    + P  ATF A+LSACS    ++ G  + +  V  +GF       + ++ +  
Sbjct: 304 DRMRR-DCVSPTSATFVALLSACS---TLEQGKHLHEE-VKAFGFESITVVETALMFMYS 358

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           R G L++AE  + ++  Q    +W A+ ++ A  G+
Sbjct: 359 RCGSLEDAE-FLFAKMQQKDYVSWSAMVTSHAQFGD 393


>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
 gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 216/664 (32%), Positives = 324/664 (48%), Gaps = 53/664 (7%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
            HA A+ +GL A+  V N++ + Y       +  RVF+  ++ D  S+ T LSA      
Sbjct: 71  FHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSAT----- 125

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                      PD D  +  A                  R +   DVR D  +F   LS+
Sbjct: 126 -----------PDPDDALAFAA-----------------RMLRTGDVRPDAVTFTVTLSL 157

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
               G     RQLH+L +++G +  V V NAL+T Y   G +  A KVFEE      D +
Sbjct: 158 AAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPAR--DLV 215

Query: 258 SYNVMMDGLASVGRVEEALIR--FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
           S+N ++ GLA  G     +IR   R +    +RP  ++  SV+ AC       +G Q+H 
Sbjct: 216 SWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHG 275

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K G E + S++N  + MY  CG    A  +F  + E+D++SW T++S       G  
Sbjct: 276 FAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMSMD-----GED 330

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLAS-SGFIEMVE--MIHAFVFINGIITNIQVSNALIS 429
           A+  +  M+  G+ P+E TF ++L+S  G     E  MIHA      +      +N+LI+
Sbjct: 331 AVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLIT 390

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YAK  R+  A  IF  M    II WN LI+G+  N      L+ F  + M  ++P+E T
Sbjct: 391 MYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAM-MKIMKPNETT 449

Query: 490 LSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            +  LS+   +   S+ +G+  H   LK  L +   +  A+I +YAK G L+ S + F  
Sbjct: 450 FASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGE 509

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
            + +  I+W A+ISA ++HG     VS F  M   G + PD     +VL+AC ++G V  
Sbjct: 510 TVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSG-VAPDGVVLLSVLTACRYSGFVSL 568

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G  IFDSM   +G     +H +C++D+LGRAG L+EAE ++             +L  AC
Sbjct: 569 GREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGAC 628

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGN  +G  +A +L E E  +   YVLLSNIYA  G W   A +R  ++  GV K+ G
Sbjct: 629 RIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVG 688

Query: 728 CSWI 731
            SW+
Sbjct: 689 FSWV 692



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 167/606 (27%), Positives = 279/606 (46%), Gaps = 92/606 (15%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS +    DAL    ++  +  ++PD  + + TL+  A    A    QLHA A RAG+  
Sbjct: 122 LSATPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIAT 181

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V N +++ Y     + + ++VF E                               MP
Sbjct: 182 DVFVGNALVTAYSRGGLMDAARKVFEE-------------------------------MP 210

Query: 151 DRDLPVYNAMITGCTENG---YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            RDL  +NA++ G  ++G    E I +   R + + DVR D  S  SV+  C A G LE 
Sbjct: 211 ARDLVSWNALVCGLAQDGECSAEVIRV-FLRMLKQGDVRPDRISVCSVIPACGAEGKLEL 269

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM--MD 264
           GRQ+H    K G    VS+ N L+ MY+ CG    A ++FE       D IS+  +  MD
Sbjct: 270 GRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGER--DVISWTTVMSMD 327

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--CP-RVGYQVHAQAMKSGFEA 321
           G       E+A+  F  M    + P+E+TFV+++S+    CP R G  +HA  +K+    
Sbjct: 328 G-------EDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSD 380

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             + +N+ ITMY+   ++D+A MIF+ +   +I++WN +IS YAQ  + + A+ A+L M 
Sbjct: 381 KAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAMM 440

Query: 382 SVGIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNER 436
            + ++P+E TF S+L++   +E V     +M H      G+  +  VS ALI  YAK   
Sbjct: 441 KI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGS 499

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++++++ F     R++I W  +I+    +G     +  F++++ S + PD   L   L++
Sbjct: 500 LEESWKAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTA 559

Query: 497 CARISSLRHGKQI-------HGYVL--------------------KNNLISKMSLG---N 526
           C     +  G++I       HG  L                       L+ +M  G   +
Sbjct: 560 CRYSGFVSLGREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVS 619

Query: 527 AMITLYAKC---GDLDCSLRVFNMMIEKDTISWNA---LISAYAQHGEGKEAVSCFKAMQ 580
           A+ +L   C   G+ D   RV +++ E +     A   L + YA+ G+        + M+
Sbjct: 620 ALQSLLGACRIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMR 679

Query: 581 DVGRIK 586
           + G  K
Sbjct: 680 ERGVKK 685



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 61/400 (15%)

Query: 21  LLKLNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  +  L++ G    + + +F+++     ++PD  S+ + + AC        G Q+
Sbjct: 214 LVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQI 273

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H +A++ G++ +  +AN ++++Y         +R+F  +   DV SWTT +S        
Sbjct: 274 HGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS-------- 325

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV- 198
                    M   D                    + LF  M +  V  +  +F ++LS  
Sbjct: 326 ---------MDGED-------------------AVSLFNGMRRDGVAPNEVTFVAMLSSM 357

Query: 199 ---CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              C A     G+ +H++  K+  S   +  N+LITMY     + DA  +F      +  
Sbjct: 358 PGDCPA---REGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFS-----LMP 409

Query: 256 H---ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----G 307
           H   I++N ++ G A     ++AL  F  M+   ++P+E TF S++SA           G
Sbjct: 410 HSEIIAWNALISGYAQNEMCQDALEAFLAMM-KIMKPNETTFASILSAVTAVETVSMAYG 468

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
              H QA+K G  A   VS A I MY+  G ++E+   F     + +++W  +IS  ++ 
Sbjct: 469 QMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKH 528

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM 404
               + +  + +M   G+ PD     S+L +   SGF+ +
Sbjct: 529 GNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSL 568


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  305 bits (781), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 173/531 (32%), Positives = 288/531 (54%), Gaps = 10/531 (1%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           +Q+H+ +  SG +    + N+L+  Y  CG + DA ++F        + +S+ +++ GLA
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP--YKNVVSWTILISGLA 98

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS 324
                 EA+  FR+M++ + +P+ +T  SV+ A       R+   VH   ++ GFE    
Sbjct: 99  KNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVF 158

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V  A + MYS  G +  A  +F  + E+++V+WN ++S Y+       AI  +  M+  G
Sbjct: 159 VETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKG 218

Query: 385 IRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           +  D +T  SL+ +S   G +++   IH F+   G   +  +  AL+  Y  +  +  A+
Sbjct: 219 LLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAH 278

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARI 500
           ++F  MS +++  W  ++ GF       + ++HF+++L +  L+ D   L   LSSC+  
Sbjct: 279 RVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHS 338

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
            +L+ G+++H   +K    + + +G+A+I +YA CG+L+ + R F  M EKD + WNA+I
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
           +    +G G +A+  F  M+  G + PD++TF +VL ACSHAG+V +G +IF  MV    
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSG-LDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
            IP   H +C++D+LGRAG LD A   IN+   Q   D +  L  AC  HGN++LG  I+
Sbjct: 458 VIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEIS 517

Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             + E E +    YVLLSN+YA AG WE     R  L+   + K PG S I
Sbjct: 518 QKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSI 568



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 248/523 (47%), Gaps = 26/523 (4%)

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS-----ACTKMGHVDYACE 144
           A PH      S+ +  +DL  ++++ ++I    + +  TFLS     A    G +  A +
Sbjct: 24  AQPHA-----SILRKLKDLKPLQQIHAQIITSGL-THNTFLSNSLMNAYVYCGLLADAKQ 77

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
           +F   P +++  +  +I+G  +N      I +FREM   + + +  + +SVL +  + GL
Sbjct: 78  IFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGL 137

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           +   + +H    + GF   V V  AL+ MY   G +  A ++FE       + +++N ++
Sbjct: 138 IRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVTWNAIV 195

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G +  G  EEA+  F  M    L     T +S++ A L   C +VG  +H   +++G+E
Sbjct: 196 SGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYE 255

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               +  A + +Y S   +D+A  +F+ +  KD+ +W  M++ ++       AI  + +M
Sbjct: 256 NDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKM 315

Query: 381 QSV-GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
             +  ++ D      +L+S   SG ++    +HA         NI V +A+I  YA    
Sbjct: 316 LGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGN 375

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A + F+ M  ++++ WN +I G  +NG+    +  F ++  S L PDE T    L +
Sbjct: 376 LEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435

Query: 497 CARISSLRHGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTI 554
           C+    +  G QI  +++K +++I  +     +I +  + G LD +   + NM  + D  
Sbjct: 436 CSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFD 495

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            ++ L+ A   HG  K      +  Q +  ++P+ A +  +LS
Sbjct: 496 VYSTLLGACRIHGNIKLG---HEISQKIFEMEPNDAGYYVLLS 535



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 241/492 (48%), Gaps = 46/492 (9%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           +T  + ++   I ++ L+++  + +A+ +F ++   +  KP+  ++S+ L A ANL    
Sbjct: 81  HTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGN-FKPNAVTISSVLPAFANLGLIR 139

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
               +H + +R G +                        VF E    D+YS         
Sbjct: 140 IAKSVHCFWVRGGFEG----------------------NVFVETALVDMYS--------- 168

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +  A ++F+ M +R++  +NA+++G +++G+ +  I LF  M +  +  D Y+  S
Sbjct: 169 KFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMS 228

Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           ++      G L+ G  +H  + ++G+     +  AL+ +Y +   V DA +VF E    V
Sbjct: 229 LIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMS--V 286

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACL---CPRVGYQ 309
            D  ++ +M+ G +S    + A+  F  ML + +L+   +  + ++S+C      + G +
Sbjct: 287 KDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRR 346

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VHA A+K+ F     V +A I MY++CG +++A   F  + EKD+V WN MI+       
Sbjct: 347 VHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGY 406

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSN 425
           G  AI  +L+M+  G+ PDE TF S+L   + +G + E +++ +  V  + +I N+Q   
Sbjct: 407 GTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYA 466

Query: 426 ALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
            +I    +  ++  AY   +NM  + +   ++TL+    ++G    G +   ++   E+ 
Sbjct: 467 CVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIF--EME 524

Query: 485 PDEYTLSVALSS 496
           P++    V LS+
Sbjct: 525 PNDAGYYVLLSN 536



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 138/261 (52%), Gaps = 2/261 (0%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
           S+L     ++ ++ IHA +  +G+  N  +SN+L++AY     +  A QIFH+   +N++
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +W  LI+G   N   V+ +  F E++M   +P+  T+S  L + A +  +R  K +H + 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           ++      + +  A++ +Y+K G +  + ++F  M E++ ++WNA++S Y+ HG  +EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAI 208

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F  M+  G +  D  T  +++ A    G +  GT I   ++   G+   +   + ++D
Sbjct: 209 DLFNLMRRKGLL-VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMD 266

Query: 634 LLGRAGYLDEAERVINSQHIQ 654
           +      +D+A RV +   ++
Sbjct: 267 IYVSHNCVDDAHRVFSEMSVK 287


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 194/654 (29%), Positives = 335/654 (51%), Gaps = 47/654 (7%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++     +SA  K+G V  A +VF  +   ++  Y A+I+G +++ +ED  + LF  M 
Sbjct: 129 DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAVELFFAML 188

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              +  + Y+F ++L+ C   +  + G Q+H +V K G    V + NAL+ +Y  CG + 
Sbjct: 189 DSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKCGFLD 248

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS 299
              ++FEE      D  S+N ++  L    + +EA   FR M L   L+    +  ++++
Sbjct: 249 LVLRLFEEMPER--DITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLT 306

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
           AC   + P  G Q+HA A+K G E++ SVS++ I  Y+ CG  ++   +F  +  +D+++
Sbjct: 307 ACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVIT 366

Query: 357 WNTMISTY----------------AQRNL---------------GRSAILAYLEMQSVGI 385
           W  MI++Y                 +RN                G  A+  ++EM   G+
Sbjct: 367 WTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGV 426

Query: 386 RPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
              + T  S++ + G ++   + + I  FV   GI++N  +  AL+  Y +  R++ A +
Sbjct: 427 EISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEK 486

Query: 443 IFHNMSPRNIIT--WNTLINGFLLNGFPVQGLQHF-SELLMSELRPDEYTLSVALSSCAR 499
           IF+  S  N  T    ++I G+  NG   + +  F S      +  DE   +  LS C  
Sbjct: 487 IFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGS 546

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
           I     G Q+H + LK+ LI++  +GNA +++Y+KC ++D ++RVFN M  +D +SWN L
Sbjct: 547 IGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGL 606

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA--GLVDDGTRIFDSMVN 617
           ++ +  H +G +A+  +K M+  G IKPD  TF  ++SA  H    LVD    +F SM  
Sbjct: 607 VAGHVLHWQGDKALGIWKKMEKAG-IKPDSITFALIISAYKHTELNLVDSCRSLFVSMET 665

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           ++   P  +H +  + +LGR G L+EAE+ I +  ++     W AL ++C  + N RL +
Sbjct: 666 EHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEK 725

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  +L  E   P  Y+L SN+Y+A+G W  +  +RE ++  G  K P  SWI
Sbjct: 726 LAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWI 779



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 229/458 (50%), Gaps = 22/458 (4%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++L +   Y +A   F  +     LK D +SLST L ACA       G QLHA AL
Sbjct: 266 NTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALAL 325

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL+++  V+++++  Y        V  +F  +   DV +WT  +++  + G +D A E
Sbjct: 326 KVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVE 385

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF+KMP R+   YNA++ G + N      + LF EM +  V   + +  S+++ C  GLL
Sbjct: 386 VFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITAC--GLL 443

Query: 205 ---EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YN 260
              +  +Q+   V K G      +  AL+ MY  CG + DA K+F + +    D+ +   
Sbjct: 444 KSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQ-RSLENDYTAMLT 502

Query: 261 VMMDGLASVGRVEEALIRFRD-MLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQA 314
            M+ G A  G++ EA+  F       ++   E+   S++S  LC  +G+     Q+H  A
Sbjct: 503 SMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILS--LCGSIGFHEMGMQMHCHA 560

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +KSG    T V NA ++MYS C  +D+A  +F  +  +DIVSWN +++ +     G  A+
Sbjct: 561 LKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKAL 620

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEMIHA-FVFI---NGIITNIQVSNALI 428
             + +M+  GI+PD  TF  ++++    E  +V+   + FV +   + I   ++   + I
Sbjct: 621 GIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFI 680

Query: 429 SAYAKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLN 465
           S   +   +++A Q   NM    ++  W  L+N   +N
Sbjct: 681 SVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRIN 718



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/581 (25%), Positives = 258/581 (44%), Gaps = 80/581 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++  S+S    +A+ LF  +  S  ++P+ Y+    L AC    +   G+Q+H   ++ G
Sbjct: 168 ISGFSKSDWEDEAVELFFAMLDS-GIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLG 226

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L +   + N ++ LY     L  V R+F E+   D+ SW T +S+  K    D   E FD
Sbjct: 227 LLSCVFICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYD---EAFD 283

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF 206
                                        FR M     ++ D++S +++L+ C   +   
Sbjct: 284 ----------------------------YFRGMQLCKGLKVDHFSLSTLLTACAGSVKPM 315

Query: 207 -GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK--------GYVCDH- 256
            G+QLH+L  K G    +SV ++LI  Y  CG+  D   +FE           G +  + 
Sbjct: 316 KGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDVITWTGMITSYM 375

Query: 257 --------------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
                               ISYN ++ GL+       AL  F +ML   +  S+ T  S
Sbjct: 376 EFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTS 435

Query: 297 VMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF-ARLQEK 352
           +++AC      +V  Q+    MK G  + + +  A + MY+ CG++++A  IF  R  E 
Sbjct: 436 IITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLEN 495

Query: 353 DIVSWNT-MISTYAQRNLGRSAILAYLEMQSVG-IRPDEFTFGSLLA---SSGFIEMVEM 407
           D  +  T MI  YA+      AI  +   QS G I  DE    S+L+   S GF EM   
Sbjct: 496 DYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQ 555

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           +H     +G+IT   V NA +S Y+K   +  A ++F+ M+ ++I++WN L+ G +L+  
Sbjct: 556 MHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQ 615

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCAR-----ISSLRHGKQIHGYVLKNNLISKM 522
             + L  + ++  + ++PD  T ++ +S+        + S R          ++N+   +
Sbjct: 616 GDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCR--SLFVSMETEHNIKPTL 673

Query: 523 SLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISA 562
               + I++  + G L +    + NM +E D   W AL+++
Sbjct: 674 EHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNS 714



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/377 (22%), Positives = 168/377 (44%), Gaps = 73/377 (19%)

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGR-------------------------------SAI 374
           F +L+E DI   N +IS Y +  L R                                A+
Sbjct: 123 FLKLEE-DIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSKSDWEDEAV 181

Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
             +  M   GI P+E+TF ++L +   +   ++   +H  V   G+++ + + NAL+  Y
Sbjct: 182 ELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLY 241

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL 490
            K   +    ++F  M  R+I +WNT+I+  +      +   +F  + L   L+ D ++L
Sbjct: 242 CKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSL 301

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD------------- 537
           S  L++CA       G+Q+H   LK  L S +S+ +++I  Y KCG              
Sbjct: 302 STLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPI 361

Query: 538 ------------------LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
                             LD ++ VFN M +++ IS+NA+++  +++ +G  A+  F  M
Sbjct: 362 RDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEM 421

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDG--TRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            + G ++    T T++++AC   GL+     ++     V  +G +      + ++D+  R
Sbjct: 422 LEEG-VEISDCTLTSIITAC---GLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTR 477

Query: 638 AGYLDEAERVINSQHIQ 654
            G +++AE++   + ++
Sbjct: 478 CGRMEDAEKIFYQRSLE 494


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 208/683 (30%), Positives = 342/683 (50%), Gaps = 52/683 (7%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S+ G +  +L LF ++       P+  +  + L+ C        G Q+HA  + + L+++
Sbjct: 292 SQDGKFSLSLQLFREM-LLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESH 350

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN++L +Y   R     + +F  +   D  SW+T + AC++    D  C   D +P 
Sbjct: 351 VVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSRE---DSHCR--DALP- 404

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                                   L+R M    V     + + VL  C +   L+ G+ +
Sbjct: 405 ------------------------LYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLV 440

Query: 211 HSLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           H+ V +SG    LV +  +L+ MY  CG V +A KVF+         I +N M+      
Sbjct: 441 HAHVIESGLEGDLVGI--SLVNMYAKCGTVGEARKVFDRINNR--SRILWNSMITAYQE- 495

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
               EAL  FR+M    + P  +TF++V++AC+       G  +H + + SGF A   V+
Sbjct: 496 KDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVA 555

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A   MY+ CG + EA  +F  +  +D+VSWN MI+ Y Q   G  AI     MQ  G+R
Sbjct: 556 TALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMR 615

Query: 387 PDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD+ TF SLL A S    +V+   IH+++  + +  +I +   LI+ YA    +  A +I
Sbjct: 616 PDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREI 675

Query: 444 FHNM------SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
           F N+        R++  W ++I  +  +G   + L+ + ++   ++  D  T    L++C
Sbjct: 676 FDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNAC 735

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A +S LR G+ IH  V++  L + +++ N+++ +Y KCG  D +  VF     KD   W 
Sbjct: 736 AHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISLWT 795

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ALI++YA+HG G++A+  F+ ++  G I+    TF A+LSACSH GL+++G   F SM  
Sbjct: 796 ALIASYARHGHGEQALWIFRRLRQDG-IELSNLTFVAMLSACSHVGLIEEGCEFFASMA- 853

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           + G  P  +H SC++DLL RAG+L  AE  ++   + A +    AL +AC  HG++   R
Sbjct: 854 ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERAR 913

Query: 678 IIAGLLLEREQDKPSVYVLLSNI 700
            +A  L   + +  + YV LSNI
Sbjct: 914 RVAEKLEALDPESEAPYVTLSNI 936



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 179/614 (29%), Positives = 308/614 (50%), Gaps = 58/614 (9%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           + PD   + T L AC  L            AL  G      +A T L L    R+L    
Sbjct: 6   IPPDRVMIKTLLTACTKLG-----------ALEEGKLIQDRLAGTQLELDIGVRNLT--- 51

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
                            ++   K G +D A + F +M  RD+  +  MI   +++G   +
Sbjct: 52  -----------------INMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSL 94

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + LFREM       ++ +F S+LS C+A  LLE GRQ+H+LV +S     V V N+L+ 
Sbjct: 95  SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLG 154

Query: 232 MYFNCGNVVDA-CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
           MY  C +  D+  + F   K    D +S+ VM+   +  G+   ++  FR+ML+    P+
Sbjct: 155 MYSRCRSWEDSRMQTFARMKRR--DVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPN 212

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS--NAAITMYSSCGKIDEACMI 345
            +TFVS++S C  P +   G Q+HA  ++S  E++  +   N  I MY  CG +D A   
Sbjct: 213 SVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQT 272

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFI 402
           FAR++ +D+VSW  MI  Y+Q      ++  + EM   G  P+  TF S+L+   +   +
Sbjct: 273 FARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLL 332

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI--- 459
           E    IHA V  + + +++ V+N+L+  Y++    + +  +F  MS R+ ++W+T+I   
Sbjct: 333 EQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMAC 392

Query: 460 ---NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
              +    +  P+     +  +L   + P    LS+ L +C  ++ L+ GK +H +V+++
Sbjct: 393 SREDSHCRDALPL-----YRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIES 447

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L   + +G +++ +YAKCG +  + +VF+ +  +  I WN++I+AY Q  +  EA+  F
Sbjct: 448 GLEGDL-VGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLF 505

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + MQ  G + PD+ TF  VL+AC +A  +++G  I   +V D GF       + + ++  
Sbjct: 506 REMQPEG-VSPDRITFMTVLNACVNAADLENGRTIHTRIV-DSGFAADVRVATALFNMYA 563

Query: 637 RAGYLDEAERVINS 650
           + G L EA  V +S
Sbjct: 564 KCGSLGEARGVFDS 577



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 247/493 (50%), Gaps = 18/493 (3%)

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  +  D     ++L+ C   G LE G+ +   +  +     + V N  I MY  CG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           +  A + F   K    D +S+ VM+   +  G+   +L  FR+ML+    P+ +TFVS++
Sbjct: 61  LDGAVQTFARMKRR--DVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSIL 118

Query: 299 SACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-IFARLQEKDI 354
           S C  P +   G Q+HA  ++S  E++  V+N+ + MYS C   +++ M  FAR++ +D+
Sbjct: 119 SGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDV 178

Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGFIEMVEMIHAF 411
           VSW  MI  Y+Q      +I  + EM   G  P+  TF S+L+   +   +E    IHA 
Sbjct: 179 VSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHAL 238

Query: 412 VFINGIIT--NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
           V  + + +  +I V N  I+ Y K   +  A Q F  M  R++++W  +I  +  +G   
Sbjct: 239 VVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFS 298

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             LQ F E+L+    P+  T    LS C   S L  G+QIH  V++++L S + + N+++
Sbjct: 299 LSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLL 358

Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH-GEGKEAVSCFKAMQDVGRIKPD 588
            +Y++C   + S  +F+ M  +D++SW+ +I A ++     ++A+  +++M   G + P 
Sbjct: 359 GMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEG-VMPK 417

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
               + VL AC     +  G ++  + V + G       +S ++++  + G + EA +V 
Sbjct: 418 TLALSMVLEACGSLAELKGG-KLVHAHVIESGLEGDLVGIS-LVNMYAKCGTVGEARKVF 475

Query: 649 NSQHIQARSDNWW 661
           +   I  RS   W
Sbjct: 476 D--RINNRSRILW 486



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 5/186 (2%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           R I   I  NS      L      +    + G Y+ AL L+ Q+HS  +++ D  +  + 
Sbjct: 673 REIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHS-RQVEADRVTFISV 731

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L ACA+L +   G  +HA  +R GL     VAN+I+ +Y           VF + ++ D+
Sbjct: 732 LNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDI 791

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN----AMITGCTENGYEDIGIGLFRE 179
             WT  +++  + GH + A  +F ++    + + N    AM++ C+  G  + G   F  
Sbjct: 792 SLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFAS 851

Query: 180 MHKLDV 185
           M +L +
Sbjct: 852 MAELGI 857


>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 652

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 181/537 (33%), Positives = 285/537 (53%), Gaps = 15/537 (2%)

Query: 207 GRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           G+Q+H  + + GF       V +L+ MY  CG +  A  VF    G   D   YN ++ G
Sbjct: 78  GQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVF---GGSERDVFGYNALISG 134

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG--YQVHAQAMKSGFEAYT 323
               G   +A+  +R+M    + P + TF S++       V    +VHA A K GF +  
Sbjct: 135 FVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDVKKVHALAFKLGFVSDC 194

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKD-IVSWNTMISTYAQRNLGRSAILAYLEMQS 382
            V +A +T YS    +++A  +F  L ++D  V WN +++ Y+       A++ + +M+ 
Sbjct: 195 YVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMRE 254

Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
            G+     T  S+L+S   SG ++    IH      G  + I VSNALI  Y K++ +++
Sbjct: 255 EGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEE 314

Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
           A  IF  M  R++ TWN+++      G     L  F  +L S +RPD  TL+  L +C R
Sbjct: 315 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGR 374

Query: 500 ISSLRHGKQIHGYVLKNNLISKMS----LGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           ++SL+ G++IHGY++ + L+++ S    + N+++ +Y KCGDL  +  VF+ M  KD+ S
Sbjct: 375 LASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 434

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           WN +I+ Y     G+ A+  F  M   G +KPD+ TF  +L ACSH+G V++G      M
Sbjct: 435 WNIMINGYGVQSCGELALDMFSCMCRAG-VKPDEITFVGLLQACSHSGFVNEGRNFLAQM 493

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
              Y  +P  DH +C++D+LGRA  L+EA  +  S  I      W ++ S+C  HGN  L
Sbjct: 494 ETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDL 553

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
             +    L E E +   VYVL+SN+Y  A  +EE  ++R+ +K   V K PGCSWIG
Sbjct: 554 AVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIG 610



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 137/548 (25%), Positives = 252/548 (45%), Gaps = 49/548 (8%)

Query: 63  TLAACANLRNAAFGNQLHAYALRAG-LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNP 121
           TL  CA  +++  G Q+H + +R G L   P    +++++Y                   
Sbjct: 65  TLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMY------------------- 105

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
                        K G +  A  VF    +RD+  YNA+I+G   NG     + ++REM 
Sbjct: 106 ------------AKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMDMYREMR 152

Query: 182 KLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
              +  D Y+F S+L   DA  +   +++H+L  K GF     V +AL+T Y    +V D
Sbjct: 153 AKGILPDKYTFPSLLKGSDAMEVSDVKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVED 212

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A KVF+E      D + +N +++G + + R E+ALI F  M    +  S  T  SV+S+ 
Sbjct: 213 AQKVFDELPDRD-DSVLWNALVNGYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSF 271

Query: 302 LCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
                   G  +H  A+K GF++   VSNA I +Y     ++EA  IF  + E+D+ +WN
Sbjct: 272 TVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWN 331

Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN 415
           +++  +         +  +  M   GIRPD  T  ++L + G +  ++    IH ++  +
Sbjct: 332 SVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIAS 391

Query: 416 GII----TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           G++    +N  + N+L+  Y K   ++ A  +F +M  ++  +WN +ING+ +       
Sbjct: 392 GLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELA 451

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK-NNLISKMSLGNAMIT 530
           L  FS +  + ++PDE T    L +C+    +  G+     +    N++        +I 
Sbjct: 452 LDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVID 511

Query: 531 LYAKCGDLDCSLRV-FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           +  +   L+ +  +  +M I  + + W +++S+   HG    AV   K + +   ++P+ 
Sbjct: 512 MLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRLYE---LEPEH 568

Query: 590 ATFTAVLS 597
                ++S
Sbjct: 569 CGVYVLMS 576



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 3/107 (2%)

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLG-NAMITLYAKCGDLDCSLRVFNMMIEK 551
            L  CA+      G+QIHG++++   +        +++ +YAKCG +  ++ VF    E+
Sbjct: 65  TLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGGS-ER 123

Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
           D   +NALIS +  +G   +A+  ++ M+  G I PD+ TF ++L  
Sbjct: 124 DVFGYNALISGFVVNGSPLDAMDMYREMRAKG-ILPDKYTFPSLLKG 169



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 13/159 (8%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL----KA 90
           G +   L LF  +  S  ++PDI +L+T L  C  L +   G ++H Y + +GL     +
Sbjct: 341 GDHDGTLALFETMLCS-GIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSS 399

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM- 149
              + N+++ +Y    DL   + VF  ++  D  SW   ++        + A ++F  M 
Sbjct: 400 NGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMC 459

Query: 150 -----PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                PD     +  ++  C+ +G+ + G     +M  L
Sbjct: 460 RAGVKPDE--ITFVGLLQACSHSGFVNEGRNFLAQMETL 496


>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  305 bits (781), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 174/535 (32%), Positives = 291/535 (54%), Gaps = 12/535 (2%)

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D+  L+ G  +H+   K      + + N L+ MY  C ++  A ++F+E      + +S+
Sbjct: 18  DSNFLK-GTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPER--NVVSW 74

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSAC-LCPRV--GYQVHAQAM 315
           + +M G    G   +AL  F  M     ++P+E TFVS + AC L   V   YQ+++  +
Sbjct: 75  SSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVV 134

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           +SG E    + NA +T     GK+ EA  IF     +D V+WNTM+  Y + +  +  + 
Sbjct: 135 RSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLEFSSEQIPVF 194

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYA 432
            +  M   G++PDEFTF S L     I  ++M   +HA +  +G   +I V N+L+  Y 
Sbjct: 195 -WRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYL 253

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           KN+++++ ++ F  +  +++ +W  + +G L  G P   L   +++    ++P+++TL+ 
Sbjct: 254 KNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLAT 313

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
           AL++CA ++S+  GKQ HG  +K      + + NA++ +YAKCG +D +  VF     + 
Sbjct: 314 ALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRS 373

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            +SW  +I A AQ+G+  EA+  F  M++   ++P+  TF  VL ACS  G VD+G +  
Sbjct: 374 VVSWTTMIMACAQNGQPGEALQIFDEMKETS-VEPNYITFICVLYACSQGGFVDEGWKYL 432

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
            SM  DYG IP EDH  CM+ +LGRAG + EA+ +I           W  L SAC  HG+
Sbjct: 433 SSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGD 492

Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
           +  G++ A   ++ +++ PS YVLLSN+ A    W+   ++REL++   V K PG
Sbjct: 493 VETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPG 547



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/503 (25%), Positives = 234/503 (46%), Gaps = 44/503 (8%)

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +HAY ++  +     + N +L++Y   +DL S                         
Sbjct: 24  GTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTS------------------------- 58

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFAS 194
                 A ++FD+MP+R++  +++++TGC  NG     + LF  MH+   V+ + ++F S
Sbjct: 59  ------ALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVS 112

Query: 195 VLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            L  C  +  +    Q++SLV +SG  C V ++NA +T     G + +A ++FE +   +
Sbjct: 113 ALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP--I 170

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQV 310
            D +++N MM G       E+  + +R M    ++P E TF S ++        ++G QV
Sbjct: 171 RDTVTWNTMMGGYLEFSS-EQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQV 229

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           HAQ ++SG+     V N+ + MY    K++E    F  +  KD+ SW  M     Q    
Sbjct: 230 HAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEP 289

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNAL 427
           R A+    +M+ +G++P++FT  + L +   +  +E     H      G   ++ V NAL
Sbjct: 290 RMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNAL 349

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK   +  A+ +F + + R++++W T+I     NG P + LQ F E+  + + P+ 
Sbjct: 350 LDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNY 409

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVF 545
            T    L +C++   +  G +    + K+  +I        M+++  + G + +    + 
Sbjct: 410 ITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELIL 469

Query: 546 NMMIEKDTISWNALISAYAQHGE 568
            M        W  L+SA   HG+
Sbjct: 470 RMPFHPGVRVWQTLLSACQIHGD 492



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 197/442 (44%), Gaps = 43/442 (9%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G   DAL LF  +H    +KP+ ++  + L AC+   N     Q+++  +R+GL+    
Sbjct: 84  NGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLEC--- 140

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
                                       +V+    FL+A  + G +  A ++F+  P RD
Sbjct: 141 ----------------------------NVFLLNAFLTALVRNGKLTEALQIFETSPIRD 172

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLHS 212
              +N M+ G  E   E I +  +R M++  V+ D ++FAS L+ +     L+ G Q+H+
Sbjct: 173 TVTWNTMMGGYLEFSSEQIPV-FWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHA 231

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + +SG+   + V N+L+ MY     + +  K F+E      D  S+  M DG    G  
Sbjct: 232 QLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHK--DVCSWTQMADGCLQWGEP 289

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAA 329
             AL     M    ++P++ T  + ++AC C      G Q H   +K G +    V NA 
Sbjct: 290 RMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNAL 349

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           + MY+ CG +D A  +F     + +VSW TMI   AQ      A+  + EM+   + P+ 
Sbjct: 350 LDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNY 409

Query: 390 FTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            TF  +L   +  GF+ E  + + +     GII        ++S   +   IK+A ++  
Sbjct: 410 ITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELIL 469

Query: 446 NMS-PRNIITWNTLINGFLLNG 466
            M     +  W TL++   ++G
Sbjct: 470 RMPFHPGVRVWQTLLSACQIHG 491



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 1/161 (0%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L S A+ S+   G  IH Y +K ++   + L N ++ +Y KC DL  +L++F+ M E++ 
Sbjct: 12  LRSYAQDSNFLKGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNV 71

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           +SW+++++    +G   +A+S F  M   G +KP++ TF + L ACS +  V    +I+ 
Sbjct: 72  VSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIY- 130

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
           S+V   G       L+  L  L R G L EA ++  +  I+
Sbjct: 131 SLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIR 171


>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 694

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 187/618 (30%), Positives = 318/618 (51%), Gaps = 16/618 (2%)

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W   L+A +  G +  A  VFD++P  D   +N+++      G       L R MH   +
Sbjct: 29  WNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGL 87

Query: 186 RRDNYSFASVLSVCDAGLL-EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
               ++  S L    A    E G QL S   + G +  V   +AL+ +Y  CG + DA +
Sbjct: 88  AASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARR 147

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
           VF+     V + +S+N ++ G     +  EA+  F +M      P   TF  +++    P
Sbjct: 148 VFDGMP--VRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGP 205

Query: 305 R---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
           R   +  Q+H + +K G        NAAIT YS C  + ++  IF  ++ +D++SWN+M+
Sbjct: 206 RWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSML 265

Query: 362 STYAQRNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGF----IEMVEMIHAFVFING 416
             YA   L   A+  ++ M +  GI+PD ++F S ++         +    IH+ V   G
Sbjct: 266 GAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFG 325

Query: 417 IITNIQVSNALISAY---AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +     V NA+I+ Y   A N  ++ AY  F ++  ++ ++WN+++ G+  +G     L+
Sbjct: 326 LEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALK 385

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  +    +R DE+ LS AL SC+ ++ LR G+Q+H  V+++   S   + +++I +Y+
Sbjct: 386 FFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYS 445

Query: 534 KCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           KCG L  + + F    +  ++ WN+++  YAQHG+ +     F  M D+  +  D  TF 
Sbjct: 446 KCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEMLDL-EVPLDHVTFV 504

Query: 594 AVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI 653
           A+++A SH GLVD+G+ I ++M   Y      +H +C +DL GRAG LD+A+ +I S   
Sbjct: 505 ALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQLDKAKELIESMPF 564

Query: 654 QARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANI 713
           Q  +  W  L  AC  HGN+ L   +A  L   E  + S YVLLS++Y+  G+W + A +
Sbjct: 565 QPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATV 624

Query: 714 RELLKRTGVIKQPGCSWI 731
           +++++   + K PG SWI
Sbjct: 625 QKVMRNRALSKIPGWSWI 642



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 171/642 (26%), Positives = 288/642 (44%), Gaps = 84/642 (13%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   I      S   LL  +++      +G ++DA  L   +H+   L    ++L + 
Sbjct: 45  RRVFDEIPHPDAASWNSLLAAHVA------AGAHRDAWRLLRAMHA-RGLAASTFALGSA 97

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           L + A  R    G QL ++++R GL      A+ +L +Y                     
Sbjct: 98  LRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVY--------------------- 136

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
                  + C ++G    A  VFD MP R++  +NA+I G T++      + LF EM ++
Sbjct: 137 -------AKCGRLGD---ARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRV 186

Query: 184 DVRRDNYSFASVL-SVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
               D  +FA +L ++         RQLH  + K G +  +  +NA IT Y  C  + D+
Sbjct: 187 GSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADS 246

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF-RDMLVASLRPSELTFVSVMSAC 301
            K+F+  +    D IS+N M+   A  G  +EA+  F R M  + ++P   +F S +S C
Sbjct: 247 RKIFDGIESR--DLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVC 304

Query: 302 L---C-PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI------FARLQE 351
               C  + G  +H+  +K G E  T V NA I MY+   +  + CM+      F+ L  
Sbjct: 305 SEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYT---RFADNCMMEDAYNCFSSLVF 361

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---I 408
           KD VSWN+M++ Y+   L   A+  +  M++  IR DEF   + L S   + ++ +   +
Sbjct: 362 KDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQV 421

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H+ V  +G  +N  VS++LI  Y+K   +  A + F      + + WN+++ G+  +G  
Sbjct: 422 HSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQA 481

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-HGYVLKNNLISKMSLGNA 527
                 F+E+L  E+  D  T  VAL     I++  HG  +  G  + N + ++  +   
Sbjct: 482 QTVTDLFNEMLDLEVPLDHVTF-VAL-----ITAYSHGGLVDEGSEILNTMETRYKIPMR 535

Query: 528 M------ITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           M      + LY + G LD +  +  +M  + D I W  L+ A   HG  + A        
Sbjct: 536 MEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELA-------S 588

Query: 581 DVGR----IKPDQ-ATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           DV R     +P Q +T+  + S  S  G+  D   +   M N
Sbjct: 589 DVARHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRN 630


>gi|125578267|gb|EAZ19413.1| hypothetical protein OsJ_34968 [Oryza sativa Japonica Group]
          Length = 786

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 195/611 (31%), Positives = 309/611 (50%), Gaps = 23/611 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G +D A +VFD+MP R+L  + AM++  T NG   +G   F  M +     + +S A+
Sbjct: 34  RRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFRFFVSMIRSGFCPNEFSLAT 93

Query: 195 VLSVCDA------GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           +L+ C +           GRQLH LV  S      SV+N+L+ MYF       A  VF +
Sbjct: 94  MLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSLVDMYFRARQKETAASVFRK 153

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPR 305
            +    D +S+N M  G A     +       DM     +P+E+TF   + +  A     
Sbjct: 154 IRQK--DTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 211

Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
           +G Q+ A A + G+     V+NA I M   CG +D A   F  L  ++IV+WN +I+ Y 
Sbjct: 212 LGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCSLTFRNIVTWNEIIAGYG 271

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITN 420
             +    A+  +  +  +G RPDEFT+ ++L  S F E       E IHA +   G  + 
Sbjct: 272 LFSHSEDAMRLFRSLVCIGERPDEFTYSAVL--SAFQEAHGARDHEQIHAIILKQGFASC 329

Query: 421 IQVSNALISAYAKN-ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
             VS +LI A A     ++ + +I  +     +++W  +I+ FL +G   + +  F+   
Sbjct: 330 QFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFLFNLFR 389

Query: 480 M-SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
             S  +PDE+ L+  L++CA  + +RH + IH  VLK    +   + +A++  YAKCG++
Sbjct: 390 GDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYAKCGEI 449

Query: 539 DCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
             +   F  +     D I +N +++AYA HG   EA++ ++ M    ++ P  ATF A+L
Sbjct: 450 TSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTK-AKLNPTPATFVAIL 508

Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
           SACSH GLV+ G   F +M++ YG  PA  + +C++DLL R G LDEA+ VI++   Q  
Sbjct: 509 SACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMPFQPW 568

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
              W +L + C  HGN +LG + A  +L         YV LSN+YA  G W+ A   R  
Sbjct: 569 PAVWRSLVNGCRIHGNKQLGVLAAEQILRMAPSSDGAYVSLSNVYADDGEWQSAEETRRR 628

Query: 717 LKRTGVIKQPG 727
           + +  + K  G
Sbjct: 629 MVQNNLQKVHG 639



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 137/579 (23%), Positives = 247/579 (42%), Gaps = 65/579 (11%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA-----AFGNQLHAYALRA 86
           +R+G        FV +  S    P+ +SL+T L AC ++  +       G QLH   + +
Sbjct: 64  TRNGAPHLGFRFFVSMIRS-GFCPNEFSLATMLTACHSMACSISAQWGLGRQLHCLVIHS 122

Query: 87  GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
            L++   V N+++ +Y  AR   +   VF +I+  D  SW                    
Sbjct: 123 MLESNTSVMNSLVDMYFRARQKETAASVFRKIRQKDTVSW-------------------- 162

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LE 205
                      N M +G   +  +    G   +M +   + +  +F+ +L +  A     
Sbjct: 163 -----------NTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNEVTFSVLLRLSGAKENAS 211

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-----DHISYN 260
            G Q+ +L  + G++  V V NA+I M F CG       + + A G+ C     + +++N
Sbjct: 212 LGLQIFALAYRHGYTDNVLVANAVINMLFRCG-------LLDRAYGFFCSLTFRNIVTWN 264

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKS 317
            ++ G       E+A+  FR ++    RP E T+ +V+SA       R   Q+HA  +K 
Sbjct: 265 EIIAGYGLFSHSEDAMRLFRSLVCIGERPDEFTYSAVLSAFQEAHGARDHEQIHAIILKQ 324

Query: 318 GFEAYTSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           GF +   VS + I   ++  G +  +  I     + ++VSW  +IS + +  L    I  
Sbjct: 325 GFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVSWGAIISAFLKHGLNDEVIFL 384

Query: 377 Y-LEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
           + L       +PDEF   ++L   A++  I     IH+ V   G   +  V++A++ AYA
Sbjct: 385 FNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTGHSNHFCVASAVVDAYA 444

Query: 433 KNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           K   I  A   F  +S    + I +NT++  +  +G   + L  + E+  ++L P   T 
Sbjct: 445 KCGEITSAESAFTAVSSATNDAIMYNTMLTAYANHGLIHEALNLYEEMTKAKLNPTPATF 504

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM- 548
              LS+C+ +  +  GK     +L    +       A ++ L A+ G LD +  V + M 
Sbjct: 505 VAILSACSHLGLVEQGKLAFSTMLSAYGMHPARANYACLVDLLARKGLLDEAKGVIDAMP 564

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            +     W +L++    HG  +  V    A + + R+ P
Sbjct: 565 FQPWPAVWRSLVNGCRIHGNKQLGV---LAAEQILRMAP 600



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 188/418 (44%), Gaps = 16/418 (3%)

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           K G  A+T   N     Y+  G +D A  +F  +  +++VSW  M+S   +         
Sbjct: 15  KLGTLAHTFNMNYLPIYYARRGLLDSALKVFDEMPHRNLVSWTAMVSASTRNGAPHLGFR 74

Query: 376 AYLEMQSVGIRPDEFTFGSLLAS--------SGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            ++ M   G  P+EF+  ++L +        S    +   +H  V  + + +N  V N+L
Sbjct: 75  FFVSMIRSGFCPNEFSLATMLTACHSMACSISAQWGLGRQLHCLVIHSMLESNTSVMNSL 134

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y +  + + A  +F  +  ++ ++WNT+ +GF  +        +  ++  +  +P+E
Sbjct: 135 VDMYFRARQKETAASVFRKIRQKDTVSWNTMFSGFAHDEDDKAVFGYLIDMSRTGFKPNE 194

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T SV L       +   G QI     ++     + + NA+I +  +CG LD +   F  
Sbjct: 195 VTFSVLLRLSGAKENASLGLQIFALAYRHGYTDNVLVANAVINMLFRCGLLDRAYGFFCS 254

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  ++ ++WN +I+ Y      ++A+  F+++  +G  +PD+ T++AVLSA   A    D
Sbjct: 255 LTFRNIVTWNEIIAGYGLFSHSEDAMRLFRSLVCIGE-RPDEFTYSAVLSAFQEAHGARD 313

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA-GYLDEAERVI-NSQHIQARSDNWWALFS 665
             +I  +++   GF   +   + ++     A G +  + ++I +S  ++  S  W A+ S
Sbjct: 314 HEQI-HAIILKQGFASCQFVSTSLIKANAAAFGSVQSSLKIIEDSGKMELVS--WGAIIS 370

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS--NIYAAAGLWEEAANIRELLKRTG 721
           A   HG       +  L      +KP  ++L +  N  A A L      I  L+ +TG
Sbjct: 371 AFLKHGLNDEVIFLFNLFRGDSTNKPDEFILATVLNACANAALIRHCRCIHSLVLKTG 428


>gi|347954452|gb|AEP33726.1| chlororespiratory reduction 21, partial [Aethionema cordifolium]
          Length = 618

 Score =  305 bits (780), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 176/607 (28%), Positives = 326/607 (53%), Gaps = 46/607 (7%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           K G +D A +VFD+MP+R++  +N+++ G  +NG  +  I L  +M    +     + ++
Sbjct: 5   KCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVTVST 64

Query: 195 VLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
            LS     G +E G+Q H++   +G      +  +++  Y   G +  A  +F+  K   
Sbjct: 65  CLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFD--KMIE 122

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
            D +++N+++ G    G +E+A+ + + M + +L+   +T  ++MSA    +   +G Q+
Sbjct: 123 KDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQL 182

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
               +++  E+    ++  + MY+ CG+I +A  +F     KD++ WNT+++ YA+ +  
Sbjct: 183 QCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSHS 242

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
             A+  + EMQ   + P+  ++                                N +I +
Sbjct: 243 GEALRLFYEMQLESVTPNVISW--------------------------------NLIILS 270

Query: 431 YAKNERIKQAYQIF-----HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
             +  ++ +A  +F       +SP N+I+W TL+NG + NG+  + + +F ++  S LRP
Sbjct: 271 LLRXGQVTEAKXMFLQIQSTGISP-NLISWTTLMNGLVQNGYSEEAIMYFKKMQESGLRP 329

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRV 544
           + ++ +VALS+C+ ++SL  G+ IHGY+++N   S  +SL  +++ +YAKCGD++ + RV
Sbjct: 330 NPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERV 389

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F   +  +   +NA+ISAY  +G+ +EA++ ++ ++ +  IKPD  TFT +LSAC+H G 
Sbjct: 390 FGNKLYSELPLYNAMISAYGLYGKVEEAITLYRDLEALD-IKPDNITFTNLLSACNHTGS 448

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           V+   +IF  MV+ +G  P  +H   M+DL   +G ++EA R++     +  +    +L 
Sbjct: 449 VNQAIQIFTDMVSKHGMQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMIQSLL 508

Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIK 724
           + C       L   ++  LLE E D    YV +SN YAA G WEE   +RE++K  G+ K
Sbjct: 509 AYCKKEHKTELVDYLSKYLLESEPDNSGNYVTISNAYAAGGNWEEVMKMREMMKEKGLKK 568

Query: 725 QPGCSWI 731
           +PGCSWI
Sbjct: 569 KPGCSWI 575



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 190/382 (49%), Gaps = 10/382 (2%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  CG +D+A  +F R+ E+++V+WN+++  Y Q  +   AI    +M + GI P   T
Sbjct: 2   MYGKCGILDDARKVFDRMPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVT 61

Query: 392 FGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             + L++S   G IE  +  HA   +NG+  +  +  ++++ Y K   I+ A  IF  M 
Sbjct: 62  VSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKMI 121

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            ++++TWN LI+G++  G     +     + +  L+ D  T+S  +S+ A    L  GKQ
Sbjct: 122 EKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQ 181

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +  Y L+N+L S +   +  + +YAKCG +  + +VF+  + KD + WN L++AYA+   
Sbjct: 182 LQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSH 241

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
             EA+  F  MQ +  + P+  ++  ++ +    G V +   +F   +   G  P     
Sbjct: 242 SGEALRLFYEMQ-LESVTPNVISWNLIILSLLRXGQVTEAKXMF-LQIQSTGISPNLISW 299

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---FSACAAHGNLRLGRIIAGLLLE 685
           + +++ L + GY +EA              N ++     SAC+   +L  GR I G ++ 
Sbjct: 300 TTLMNGLVQNGYSEEAIMYFKKMQESGLRPNPFSXTVALSACSNLASLHFGRSIHGYIIR 359

Query: 686 REQDKPSVYVLLS--NIYAAAG 705
            +    SV +  S  ++YA  G
Sbjct: 360 NQWHSGSVSLETSLLDMYAKCG 381



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 200/426 (46%), Gaps = 40/426 (9%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
           MY  CG + DA KVF+       + +++N +M G    G  EEA+    DM+   + P+ 
Sbjct: 2   MYGKCGILDDARKVFDRMPER--NVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTR 59

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           +T  + +SA         G Q HA A+ +G E    +  + +  Y   G I+ A MIF +
Sbjct: 60  VTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEMIFDK 119

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MV 405
           + EKD+V+WN +IS Y Q+ L   AI     M+   ++ D  T  +L++++   +   + 
Sbjct: 120 MIEKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLG 179

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           + +  +   N + ++I  ++  +  YAK  RI  A ++F +   ++++ WNTL+  +  +
Sbjct: 180 KQLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAES 239

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
               + L+ F E+ +  + P+  + ++ + S  R   +   K +                
Sbjct: 240 SHSGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMF--------------- 284

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
                           L++ +  I  + ISW  L++   Q+G  +EA+  FK MQ+ G +
Sbjct: 285 ----------------LQIQSTGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQESG-L 327

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           +P+  + T  LSACS+   +  G  I   ++ +     +    + +LD+  + G +++AE
Sbjct: 328 RPNPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAE 387

Query: 646 RVINSQ 651
           RV  ++
Sbjct: 388 RVFGNK 393



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/552 (21%), Positives = 240/552 (43%), Gaps = 78/552 (14%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  ++A+ L   + +   ++P   ++ST L+A A++     G Q HA A+  GL+   
Sbjct: 36  QNGMNEEAIRLLSDMMN-EGIEPTRVTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDN 94

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +  +IL+ Y                                K+G ++ A  +FDKM ++
Sbjct: 95  ILGTSILNFY-------------------------------CKVGLIECAEMIFDKMIEK 123

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLH 211
           D+  +N +I+G  + G  +  I   + M   +++ D  + ++++S       L  G+QL 
Sbjct: 124 DVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQLQ 183

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
               ++     +   +  + MY  CG ++DA KVF+       D + +N ++   A    
Sbjct: 184 CYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHK--DLMLWNTLLAAYAESSH 241

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
             EAL  F +M + S+ P+ +++                                N  I 
Sbjct: 242 SGEALRLFYEMQLESVTPNVISW--------------------------------NLIIL 269

Query: 332 MYSSCGKIDEACMIFARLQ----EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
                G++ EA  +F ++Q      +++SW T+++   Q      AI+ + +MQ  G+RP
Sbjct: 270 SLLRXGQVTEAKXMFLQIQSTGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQESGLRP 329

Query: 388 DEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQI 443
           + F+    L++   +  +     IH ++  N   + ++ +  +L+  YAK   I +A ++
Sbjct: 330 NPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERV 389

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F N     +  +N +I+ + L G   + +  + +L   +++PD  T +  LS+C    S+
Sbjct: 390 FGNKLYSELPLYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSV 449

Query: 504 RHGKQIH-GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALIS 561
               QI    V K+ +   +     M+ L+A  G+++ +LR+  +M  E D     +L+ 
Sbjct: 450 NQAIQIFTDMVSKHGMQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMIQSLL- 508

Query: 562 AYAQHGEGKEAV 573
           AY +     E V
Sbjct: 509 AYCKKEHKTELV 520



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 164/370 (44%), Gaps = 56/370 (15%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++   + G  +DA++   ++     LK D  ++ST ++A A+ ++   G QL  Y L
Sbjct: 129 NLLISGYVQQGLIEDAIYK-CKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQLQCYCL 187

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  L++    A+T + +Y     ++  K+VF    + D+  W T L+A  +  H   A  
Sbjct: 188 RNSLESDIVSASTTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAAYAESSHSGEALR 247

Query: 145 VFDKM------PD---------------------------------RDLPVYNAMITGCT 165
           +F +M      P+                                  +L  +  ++ G  
Sbjct: 248 LFYEMQLESVTPNVISWNLIILSLLRXGQVTEAKXMFLQIQSTGISPNLISWTTLMNGLV 307

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLV 223
           +NGY +  I  F++M +  +R + +S    LS C +   L FGR +H  + ++ + S  V
Sbjct: 308 QNGYSEEAIMYFKKMQESGLRPNPFSXTVALSACSNLASLHFGRSIHGYIIRNQWHSGSV 367

Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
           S+  +L+ MY  CG++  A +VF        +   YN M+      G+VEEA+  +RD+ 
Sbjct: 368 SLETSLLDMYAKCGDINKAERVF--GNKLYSELPLYNAMISAYGLYGKVEEAITLYRDLE 425

Query: 284 VASLRPSELTFVSVMSACLCPRVGYQ--------VHAQAMKSGFEAYTSVSNAAITMYSS 335
              ++P  +TF +++SAC       Q        V    M+   E Y       + +++S
Sbjct: 426 ALDIKPDNITFTNLLSACNHTGSVNQAIQIFTDMVSKHGMQPCLEHY----GLMVDLFAS 481

Query: 336 CGKIDEACMI 345
            G+I+EA  I
Sbjct: 482 SGEIEEALRI 491



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 141/335 (42%), Gaps = 85/335 (25%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           L ++G+ ++A+  F ++  S  L+P+ +S +  L+AC+NL +  FG  +H Y +R     
Sbjct: 306 LVQNGYSEEAIMYFKKMQES-GLRPNPFSXTVALSACSNLASLHFGRSIHGYIIR----- 359

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
                                    ++  +  V   T+ L    K G ++ A  VF    
Sbjct: 360 -------------------------NQWHSGSVSLETSLLDMYAKCGDINKAERVFGNKL 394

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ 209
             +LP+YNAMI+     G  +  I L+R++  LD++ DN +F ++LS C+  G +    Q
Sbjct: 395 YSELPLYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQAIQ 454

Query: 210 LHS-LVTKSGFS-CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + + +V+K G   CL                                +H  Y +M+D  A
Sbjct: 455 IFTDMVSKHGMQPCL--------------------------------EH--YGLMVDLFA 480

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR--------VGYQVHAQAMKSGF 319
           S G +EEAL   +DM      P      S+++ C              Y + ++   SG 
Sbjct: 481 SSGEIEEALRIVKDM---PYEPDARMIQSLLAYCKKEHKTELVDYLSKYLLESEPDNSG- 536

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
             Y ++SNA    Y++ G  +E   +   ++EK +
Sbjct: 537 -NYVTISNA----YAAGGNWEEVMKMREMMKEKGL 566


>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
 gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
 gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 745

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 190/536 (35%), Positives = 286/536 (53%), Gaps = 26/536 (4%)

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H L     +S  V + N LI MY  CGN++ A +VF+       + +S+  ++ G    G
Sbjct: 84  HMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPER--NVVSWTALITGYVQAG 141

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAI 330
             +E    F  ML     P+E T  SV+++C     G QVH  A+K G      V+NA I
Sbjct: 142 NEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR-YEPGKQVHGLALKLGLHCSIYVANAVI 199

Query: 331 TMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           +MY  C       EA  +F  ++ K++V+WN+MI+ +   NLG+ AI  ++ M S G+  
Sbjct: 200 SMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259

Query: 388 DEFTF----GSLLASSGFI-----EMVEMIHAFVFINGIITNIQVSNALISAYAKN-ERI 437
           D  T      SL  SS  +     +    +H+    +G++T  +V+ ALI  Y++  E  
Sbjct: 260 DRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDY 319

Query: 438 KQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
              Y++F  MS  R+I+ WN +I  F +   P + +  F +L   +L PD YT S  L +
Sbjct: 320 TDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKA 378

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           CA + + RH   IH  V+K   ++   L N++I  YAKCG LD  +RVF+ M  +D +SW
Sbjct: 379 CAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSW 438

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           N+++ AY+ HG+    +  F+ M     I PD ATF A+LSACSHAG V++G RIF SM 
Sbjct: 439 NSMLKAYSLHGQVDSILPVFQKMD----INPDSATFIALLSACSHAGRVEEGLRIFRSMF 494

Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLG 676
                +P  +H +C++D+L RA    EAE VI    +   +  W AL  +C  HGN RLG
Sbjct: 495 EKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG 554

Query: 677 RIIAGLLLEREQDKPSV-YVLLSNIYAAAGLWEEA-ANIRELLKRTGVIKQPGCSW 730
           ++ A  L E  +   S+ Y+ +SNIY A G + EA  +I+E ++   V K+P  SW
Sbjct: 555 KLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE-METWRVRKEPDLSW 609



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 259/566 (45%), Gaps = 69/566 (12%)

Query: 28  LANLSRSGHYQDALHLF----VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           L  L RSG  + A+ LF    V++ S         + +    ACA  RN   G  LH + 
Sbjct: 33  LRTLVRSGDIRRAVSLFYSAPVELQSQQ-------AYAALFQACAEQRNLLDGINLHHHM 85

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           L      Y +  N IL+ +                           ++   K G++ YA 
Sbjct: 86  LS---HPYCYSQNVILANF--------------------------LINMYAKCGNILYAR 116

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
           +VFD MP+R++  + A+ITG  + G E  G  LF  M       + ++ +SVL+ C    
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPNEFTLSSVLTSCR--- 172

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN---VVDACKVFEEAKGYVCDHISYN 260
            E G+Q+H L  K G  C + V NA+I+MY  C +     +A  VFE  K    + +++N
Sbjct: 173 YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK--FKNLVTWN 230

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCP----RVGYQVH 311
            M+         ++A+  F  M    +     T +++ S+      L P    +   Q+H
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM-IFARLQE-KDIVSWNTMISTYAQRNL 369
           +  +KSG    T V+ A I +YS   +    C  +F  +   +DIV+WN +I+ +A  + 
Sbjct: 291 SLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP 350

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVEM--IHAFVFINGIITNIQVSNA 426
            R AI  + +++   + PD +TF S+L A +G +       IHA V   G + +  ++N+
Sbjct: 351 ER-AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI AYAK   +    ++F +M  R++++WN+++  + L+G     L  F ++   ++ PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPD 466

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
             T    LS+C+    +  G +I   +  K   + +++    +I + ++      +  V 
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVI 526

Query: 546 NMM-IEKDTISWNALISAYAQHGEGK 570
             M ++ D + W AL+ +  +HG  +
Sbjct: 527 KQMPMDPDAVVWIALLGSCRKHGNTR 552


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 196/612 (32%), Positives = 323/612 (52%), Gaps = 33/612 (5%)

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
           +VF  M  RD+  +N M++   +       I  FR M K  ++    SF +V  ++   G
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114

Query: 203 LLEFGRQLHSLVTKSG--FSCLVSVVNALITMYFN------CGNVVDAC--KVFEEAKGY 252
             +    L+ ++ K G  ++  + VV++ I+MY        C  V D+C  K  E     
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
           +  HI  N  ++G+          +  + M        ++TF+S ++A     C  +G Q
Sbjct: 175 IGGHIQNNSFLEGV---------YLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQ 225

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +HA  MK+      +V NA + MYS C  +  +  +F ++ EKD+VSWNTMIS + Q  L
Sbjct: 226 MHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGL 285

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNA 426
               ++   EMQ  G   D  T  SLL+++  +   E+ +  HA++  +GI  +  + + 
Sbjct: 286 DEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSY 344

Query: 427 LISAYAKNERIKQAYQIF--HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           LI  YAK+  I+ + ++F  +N+  R+  TWN +I G+  NG   Q    F  +L   LR
Sbjct: 345 LIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLR 404

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
           P+  TL+  L +C+ + S+  GKQ+HG  ++ +L   + +  A++ +Y+K G ++ +  V
Sbjct: 405 PNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESV 464

Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
           F    E++++++  +I  Y QHG G+ A+S F +M+  G I+PD  TF AVLSACS+AGL
Sbjct: 465 FTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSG-IQPDAITFVAVLSACSYAGL 523

Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS-DNWWAL 663
           VD+G RIF+SM  D+   P+  H  C+ D+LGR G + EA   +     +    + W +L
Sbjct: 524 VDEGLRIFESMKRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSL 583

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQ-DKPSVY-VLLSNIYAAAGLWEEAANIRELLKRTG 721
             AC  HG++ LG  ++  LLE    D+ + Y VLLSN+YA    WE    +R+ ++  G
Sbjct: 584 LGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKG 643

Query: 722 VIKQPGCSWIGS 733
           + K+ GCSWI +
Sbjct: 644 LRKEVGCSWIDT 655



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 185/382 (48%), Gaps = 43/382 (11%)

Query: 35  GHYQ-----DALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
           GH Q     + ++LF+Q + + H +  D+  LS  L A + L+    G Q+HA+ ++   
Sbjct: 177 GHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSA-LTAVSQLQCLGLGQQMHAFTMKNHT 235

Query: 89  KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
                V N IL +Y                            S C     V  + EVF+K
Sbjct: 236 VLSVTVLNAILVMY----------------------------SRCNS---VQTSFEVFEK 264

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           MP++D+  +N MI+G  +NG ++ G+ L  EM K     D+ +  S+LS   +    E G
Sbjct: 265 MPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIG 324

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           +Q H+ + + G      + + LI MY   G +  + +VFE       D  ++N ++ G  
Sbjct: 325 KQTHAYLIRHGIK-FDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYT 383

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS 324
             G VE+A I FR ML  +LRP+ +T  S++ AC       +G Q+H  +++   +    
Sbjct: 384 QNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIF 443

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V  A + MYS  G I+ A  +F +  E++ V++ TMI  Y Q  +G +A+  +  M+  G
Sbjct: 444 VRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSG 503

Query: 385 IRPDEFTFGSLLASSGFIEMVE 406
           I+PD  TF ++L++  +  +V+
Sbjct: 504 IQPDAITFVAVLSACSYAGLVD 525



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 198/418 (47%), Gaps = 13/418 (3%)

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMI 161
           +KNA  L  +          D++  ++ +S   ++G +D   +VFD   ++   V+N MI
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175

Query: 162 TGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGF 219
            G  +N     G+ LF +  K +    D+ +F S L+ V     L  G+Q+H+   K+  
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
              V+V+NA++ MY  C +V  + +VFE+      D +S+N M+ G    G  EE L+  
Sbjct: 236 VLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEK--DVVSWNTMISGFIQNGLDEEGLMLV 293

Query: 280 RDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
            +M         +T  S++SA    R   +G Q HA  ++ G + +  + +  I MY+  
Sbjct: 294 YEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIK-FDGMDSYLIDMYAKS 352

Query: 337 GKIDEACMIFA--RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
           G I  +  +F    +Q +D  +WN +I+ Y Q  L   A + +  M    +RP+  T  S
Sbjct: 353 GLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLAS 412

Query: 395 LL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
           +L   +S G I + + +H       +  NI V  AL+  Y+K+  I  A  +F   S RN
Sbjct: 413 ILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERN 472

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            +T+ T+I G+  +G     L  F  +  S ++PD  T    LS+C+    +  G +I
Sbjct: 473 SVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRI 530



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 79/163 (48%), Gaps = 2/163 (1%)

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +++F  M  R++I WNT+++ ++     V+ ++ F  ++   ++P   +      + + +
Sbjct: 54  HKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSV 113

Query: 501 SSLRHGKQIHGYVLK--NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
              ++   ++G +LK  N   + + + ++ I++YA+ G LD   +VF+  +EK    WN 
Sbjct: 114 GDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNT 173

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           +I  + Q+    E V  F           D  TF + L+A S 
Sbjct: 174 MIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQ 216


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 175/490 (35%), Positives = 266/490 (54%), Gaps = 23/490 (4%)

Query: 258 SYNVMMDGLASVGR-VEEALIRFRDMLVASLRPSELTF----------VSVMSACLCPRV 306
           ++N+M+  L +       AL  F  M+  SL P   TF           S+  AC     
Sbjct: 88  AFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHAC----- 142

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
               H+   K    +    +++ IT Y+ CG +  A  +F  +  +D VSWN+MI+ YA+
Sbjct: 143 --AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAK 200

Query: 367 RNLGRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQ 422
               R A+  + EM +  G  PDE +  SLL + G +  +E+   +  FV   G+  N  
Sbjct: 201 AGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSY 260

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           + +ALIS YAK   ++ A +IF  M+ R++ITWN +I+G+  NG   + +  F  +    
Sbjct: 261 IGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDC 320

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
           +  ++ TL+  LS+CA I +L  GKQI  Y  +      + +  A+I +YAK G LD + 
Sbjct: 321 VTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQ 380

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV-GRIKPDQATFTAVLSACSH 601
           RVF  M +K+  SWNA+ISA A HG+ KEA+S F+ M D  G  +P+  TF  +LSAC H
Sbjct: 381 RVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVH 440

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGLVD+G R+FD M   +G +P  +H SCM+DLL RAG+L EA  +I     +       
Sbjct: 441 AGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLG 500

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL  AC +  N+ +G  +  ++LE +      Y++ S IYA   +WE++A +R L+++ G
Sbjct: 501 ALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKG 560

Query: 722 VIKQPGCSWI 731
           + K PGCSWI
Sbjct: 561 ITKTPGCSWI 570



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 203/438 (46%), Gaps = 44/438 (10%)

Query: 24  LNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
            NI +  L+ + H Y  AL LF ++ S   L PD ++      +CANL + +     H+ 
Sbjct: 89  FNIMIRALTTTWHNYPLALSLFHRMMSL-SLTPDNFTFPFFFLSCANLASLSHACAAHSL 147

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
             +  L + PH A+++++ Y     + S ++VF EI + D  SW + ++   K G    A
Sbjct: 148 LFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREA 207

Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DA 201
            EVF +M  RD              G+E                 D  S  S+L  C + 
Sbjct: 208 VEVFREMGRRD--------------GFEP----------------DEMSLVSLLGACGEL 237

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           G LE GR +   V + G +    + +ALI+MY  CG +  A ++F+       D I++N 
Sbjct: 238 GDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAAR--DVITWNA 295

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
           ++ G A  G  +EA++ F  M    +  +++T  +V+SAC       +G Q+   A + G
Sbjct: 296 VISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRG 355

Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
           F+    V+ A I MY+  G +D A  +F  + +K+  SWN MIS  A     + A+  + 
Sbjct: 356 FQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQ 415

Query: 379 EM--QSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYA 432
            M  +  G RP++ TF  LL++   +G + E   +      + G++  I+  + ++   A
Sbjct: 416 HMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLA 475

Query: 433 KNERIKQAYQIFHNMSPR 450
           +   + +A+ +   M  +
Sbjct: 476 RAGHLYEAWDLIRKMPEK 493


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 167/481 (34%), Positives = 260/481 (54%), Gaps = 9/481 (1%)

Query: 259 YNVMMDGLASVGRVE-EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
           YN ++ GLA+      E L+ ++ ML   + P   T   V+ AC   R    G +VH QA
Sbjct: 92  YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 151

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +K G  +   VSN  + MY+ C  I  A  +F    ++D+VSW TMI  Y +    R  +
Sbjct: 152 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 211

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIIT-NIQVSNALISA 430
             + EM    ++ D  T   +L+S    G + +   +H ++  N  +  ++ V NAL+  
Sbjct: 212 GLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDM 271

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           Y K      A ++F  M  +N+++WN++I+G    G   + L  F ++    ++PD+ TL
Sbjct: 272 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 331

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              L+SCA +  L  GK +H Y+ +N + +   +GNA++ +YAKCG +D +  VF  M  
Sbjct: 332 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 391

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           KD  S+ A+I   A HG+G +A+  F  M  +G I+PD+ TF  VL+ACSH GLV++G +
Sbjct: 392 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG-IEPDEVTFVGVLTACSHVGLVEEGRK 450

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            F+ M   Y   P  +H  CM+DLLGRAG ++EAE  I +  I+  +    AL  AC  H
Sbjct: 451 YFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIH 510

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           G + LG  +   + + E  K   YVL+SNIY++A  W +A  +R+ +K   + K PGCS 
Sbjct: 511 GKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSS 570

Query: 731 I 731
           I
Sbjct: 571 I 571



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 258/514 (50%), Gaps = 25/514 (4%)

Query: 92  PHVAN----TILSLYKNARDLVSVKRVFSEI----QNPDV-YSWTTFLSA-CTKMGHVD- 140
           PH  N    + LS  +  + +  +K++ + I     +PD   + +T LSA C +   +D 
Sbjct: 15  PHDFNPHKLSFLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDP 74

Query: 141 -YACEVFDKMPDRDLPVYNAMITGCTENGYEDI-GIGLFREMHKLDVRRDNYSFASVLSV 198
            YA  +  ++   +LP+YNA+I G   +  + I G+ ++++M    +  DNY+   VL  
Sbjct: 75  RYALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKA 134

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C ++  +  G ++H    K G +  V V N L+ MY  C  +  A KVF+ +     D +
Sbjct: 135 CAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLV 192

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQA 314
           S+  M+ G   +G   E +  F +M   +L+   +T V V+S+C      R+G ++H   
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI 252

Query: 315 MK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           ++ S       V NA + MY  CG  + A  +F  +  K++VSWN+MIS  AQ+   + +
Sbjct: 253 IRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKES 312

Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
           +  + +MQ +G++PD+ T  ++L   A+ G +E+ + +HA++  N I  +  + NAL+  
Sbjct: 313 LYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDM 372

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   I QA  +F  M+ +++ ++  +I G  ++G   + L  FSE+    + PDE T 
Sbjct: 373 YAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTF 432

Query: 491 SVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR-VFNMM 548
              L++C+ +  +  G++         NL  ++     M+ L  + G ++ +   + NM 
Sbjct: 433 VGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP 492

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
           IE D     AL+ A   HG+ +   S  K ++ +
Sbjct: 493 IEPDAFVLGALLGACKIHGKVELGESVMKKIEKI 526



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 208/447 (46%), Gaps = 46/447 (10%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           S  + PD Y++   L ACA  R    G ++H  A++ GL +  +V+NT++ +Y     + 
Sbjct: 118 SKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIR 177

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           S ++VF                               D  P RDL  +  MI G  + G+
Sbjct: 178 SARKVF-------------------------------DTSPQRDLVSWTTMIQGYVKMGF 206

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTK-SGFSCLVSVVN 227
              G+GLF EM   +++ D  +   VLS C   G L  GR+LH  + + S  +  V V N
Sbjct: 207 AREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGN 266

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           AL+ MY  CG+   A KVF+E    V + +S+N M+ GLA  G+ +E+L  FR M    +
Sbjct: 267 ALVDMYLKCGDANFARKVFQEMP--VKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV 324

Query: 288 RPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           +P ++T V+V+++C       +G  VHA   ++   A   + NA + MY+ CG ID+AC 
Sbjct: 325 KPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACW 384

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F  +  KD+ S+  MI   A    G  A+  + EM  +GI PDE TF  +L +   + +
Sbjct: 385 VFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444

Query: 405 VEMIHAFVFINGIITNIQVS----NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           VE    +      I N++        ++    +   I +A +   NM     I  +  + 
Sbjct: 445 VEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMP----IEPDAFVL 500

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDE 487
           G LL    + G     E +M ++   E
Sbjct: 501 GALLGACKIHGKVELGESVMKKIEKIE 527



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/426 (25%), Positives = 197/426 (46%), Gaps = 72/426 (16%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           + G  ++ + LF ++     L+ D  +L   L++CA L +   G +LH Y +R       
Sbjct: 203 KMGFAREGVGLFFEM-CGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR------- 254

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
              N+ ++L                    DV+     +    K G  ++A +VF +MP +
Sbjct: 255 ---NSNVNL--------------------DVFVGNALVDMYLKCGDANFARKVFQEMPVK 291

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
           ++  +N+MI+G  + G     + +FR+M +L V+ D+ +  +VL+ C + G+LE G+ +H
Sbjct: 292 NVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVH 351

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           + + ++       + NAL+ MY  CG++  AC VF+       D  SY  M+ GLA  G+
Sbjct: 352 AYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRK--DVYSYTAMIVGLAMHGQ 409

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAIT 331
             +AL  F +M    + P E+TFV V++AC         H   ++ G + +  +S    T
Sbjct: 410 GGKALDLFSEMPKMGIEPDEVTFVGVLTAC--------SHVGLVEEGRKYFEDMS----T 457

Query: 332 MYSSCGKIDE-ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQSVGIRPD 388
           +Y+   +++   CM+       D+              LGR+ ++   E  ++++ I PD
Sbjct: 458 IYNLRPQLEHYGCMV-------DL--------------LGRAGLINEAEEFIRNMPIEPD 496

Query: 389 EFTFGSLLASSGFIEMVEMIHAFV-FINGIITNIQVSNALIS-AYAKNERIKQAYQIFHN 446
            F  G+LL +      VE+  + +  I  I      +  L+S  Y+   R + A ++   
Sbjct: 497 AFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKT 556

Query: 447 MSPRNI 452
           M  RN+
Sbjct: 557 MKERNL 562



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 33/186 (17%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++ L++ G ++++L++F ++     +KPD  +L   L +CANL     G  +HAY  
Sbjct: 297 NSMISGLAQKGQFKESLYMFRKMQRL-GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLD 355

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  ++A   + N ++ +Y     +     VF  +   DVYS+T                 
Sbjct: 356 RNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYT----------------- 398

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                         AMI G   +G     + LF EM K+ +  D  +F  VL+ C   GL
Sbjct: 399 --------------AMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444

Query: 204 LEFGRQ 209
           +E GR+
Sbjct: 445 VEEGRK 450


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 216/665 (32%), Positives = 317/665 (47%), Gaps = 55/665 (8%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA A+  GL  +  V N++ + Y       S   VF+  +  DV S+ T LSA      
Sbjct: 54  LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPD--- 110

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                      P   L   + M+                       VR D  +    LS+
Sbjct: 111 -----------PAEALDFASWMLRSGA-------------------VRPDAVTCTVALSL 140

Query: 199 CDAGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
             AG  E    RQLH+L  +SG +  V V NAL+T Y   G++ +A  VF++      D 
Sbjct: 141 A-AGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPAR--DL 197

Query: 257 ISYNVMMDGLASVGRVEEALIR--FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
           +S+N ++ GLA  G     +I    R +    ++P  ++  SV+ AC       +G QVH
Sbjct: 198 VSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVH 257

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             A+K G E Y S+ N  + MY  CG    A  +F  + E+D+VSW T IS       G 
Sbjct: 258 GFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMD-----GE 312

Query: 372 SAILAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
            A+  +  M+  G+ P+E TF +L   L +       +M+HA      +      SN+LI
Sbjct: 313 DALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLI 372

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
           + YAK  R+  A  +F  M  R II WN +I+G+  NG     L+ FS +    L P+E 
Sbjct: 373 TMYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNET 431

Query: 489 TLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           T +  LS+   +   S+ +G+  H   L         +  A+I +YAK G+L+ S + F+
Sbjct: 432 TFASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFH 491

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
              ++  I+W A+ISA A+HG     +S F  M   G + PD     AVL+AC + G+VD
Sbjct: 492 ETEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSG-VAPDGVVLLAVLTACRYGGMVD 550

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            G  IFDSM  D G     +H SC++D+LGRAG L EAE ++             +L  A
Sbjct: 551 AGRDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGA 610

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HG+  +G  IA +L E+E  +   YVLLSNIYA  G W+  A +R  ++  GV K+ 
Sbjct: 611 CRIHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEI 670

Query: 727 GCSWI 731
           G SW+
Sbjct: 671 GFSWV 675



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 159/593 (26%), Positives = 256/593 (43%), Gaps = 88/593 (14%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL     +  S  ++PD  + +  L+  A         QLHA A R+GL A   V N +
Sbjct: 113 EALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNAL 172

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           ++ Y     L   + VF +                               MP RDL  +N
Sbjct: 173 VTAYSRGGSLGEARSVFDD-------------------------------MPARDLVSWN 201

Query: 159 AMITGCTENG---YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLV 214
           A+I G  ++G    E IG+   R +   DV+ D  S  SV+  C   G LE GRQ+H   
Sbjct: 202 ALICGLAQDGDCPAEVIGV-FLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFA 260

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
            K G    VS+ N L+ MY+ CG    A ++F+          +  + MDG       E+
Sbjct: 261 VKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDG-------ED 313

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACL--CPRVGYQ-VHAQAMKSGFEAYTSVSNAAIT 331
           AL  F  M    + P+E+TFV++MSA    CP  G Q VHA  +K+      + SN+ IT
Sbjct: 314 ALTLFNGMRRDGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLIT 373

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+   ++D+A M+F  +  ++I++WN +IS YAQ      A+  +  M    + P+E T
Sbjct: 374 MYAKARRMDDARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSMARC-LTPNETT 432

Query: 392 FGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           F S+L++   +E V     +M H+     G   +  V+ ALI  YAK   ++++ + FH 
Sbjct: 433 FASVLSAVTAVETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHE 492

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
              R++I W  +I+    +G     +  F ++  S + PD   L   L++C     +  G
Sbjct: 493 TEQRSLIAWTAIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAG 552

Query: 507 KQIHGYVLKN---------------------------NLISKMSLG---NAMITLYAKC- 535
           + I   +  +                            L+ +M  G   +A+ +L   C 
Sbjct: 553 RDIFDSMAADRGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACR 612

Query: 536 --GDLDCSLRVFNMMIEKDTISWNA---LISAYAQHGEGKEAVSCFKAMQDVG 583
             GD +   R+  ++ EK+     A   L + YA  G+        + M+D G
Sbjct: 613 IHGDAEIGERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRG 665



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 173/393 (44%), Gaps = 46/393 (11%)

Query: 21  LLKLNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  +  L++ G    + + +F+++     ++PD  S+ + + AC        G Q+
Sbjct: 197 LVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQV 256

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H +A++ G++ Y  + N ++++Y       S +R+F  +   DV SWTT +S        
Sbjct: 257 HGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS-------- 308

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
                    M   D                    + LF  M +  V  +  +F +++S  
Sbjct: 309 ---------MDGED-------------------ALTLFNGMRRDGVPPNEVTFVALMSAL 340

Query: 200 DAGLLEFGRQL-HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
            A     G Q+ H+   K+  S   +  N+LITMY     + DA  VF+       + I+
Sbjct: 341 PADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRR--EIIA 398

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----GYQVHAQ 313
           +N ++ G A  GR  +AL  F  M    L P+E TF SV+SA           G   H++
Sbjct: 399 WNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTAVETVSMAYGQMYHSR 457

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+  GF     V+ A I MY+  G ++E+   F   +++ +++W  +IS  A+     + 
Sbjct: 458 ALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWTAIISANARHGSYGAV 517

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +  + +M   G+ PD     ++L +  +  MV+
Sbjct: 518 MSLFGDMARSGVAPDGVVLLAVLTACRYGGMVD 550



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 101/278 (36%), Gaps = 61/278 (21%)

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           P  G+ H S      + P  ++ +V  S  A + +L      H   +   L    ++ N+
Sbjct: 19  PFDGIPHPSLARHRRVNPIAFSAAVRASDPASLPAL------HAVAVTTGLHGFAAVTNS 72

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           +   YAK G    ++ VF     +D  S+N ++SA+    E  +  S    M   G ++P
Sbjct: 73  LAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPAEALDFASW---MLRSGAVRP 129

Query: 588 DQATFTAVLS-----------------------------------ACSHAGLVDDGTRIF 612
           D  T T  LS                                   A S  G + +   +F
Sbjct: 130 DAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVF 189

Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLD-EAE------RVINSQHIQARSDNWWALFS 665
           D M       PA D +S    + G A   D  AE      R++    +Q    +  ++  
Sbjct: 190 DDM-------PARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIP 242

Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
           AC   G L LGR + G  ++   +    YV + N+  A
Sbjct: 243 ACGGEGKLELGRQVHGFAVKLGVEG---YVSIGNVLVA 277


>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Vitis vinifera]
          Length = 629

 Score =  305 bits (780), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 175/537 (32%), Positives = 277/537 (51%), Gaps = 11/537 (2%)

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+++HS +  +GF      + +LI MY  C  +  A  +F +    + +  ++N ++
Sbjct: 53  LSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEI-NVFAFNAII 111

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
            G  + G  EE    ++ M    + P + TF   + ACL      ++H    K G E   
Sbjct: 112 SGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDV 171

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            + +A +  Y   G ++ A + F  L  +D+V WN M++ YAQ       +  +  M   
Sbjct: 172 FIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDE 231

Query: 384 GIRPDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            + P  FT     S+ A  G +    +IH F    G  + + VSN+LI  Y K + I+ A
Sbjct: 232 SVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDA 291

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            +IF  M  ++I +WN++++     G     L+    +L + ++PD  T++  L +C+ +
Sbjct: 292 LEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHL 351

Query: 501 SSLRHGKQIHGYVLKNNL------ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           ++L HG++IHGY++ + L      I  + L NA+I +YAKCG +  +  VF  M  KD  
Sbjct: 352 AALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVA 411

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN +I  Y  HG G EA+  F  M +V ++KPD+ TF  VLSACSHAG V  G      
Sbjct: 412 SWNIMIMGYGMHGYGNEALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGRNFLVQ 470

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M + Y   P  +H +C++D+LGRAG LDEA  +  +  I+A    W AL +AC  H +  
Sbjct: 471 MKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAV 530

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           L  + A  + E E +    YVL+SN+Y A G +EE   +R  +++  V K PGCSWI
Sbjct: 531 LAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 29/380 (7%)

Query: 103 KNARDLVSVKRV----FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           K   D++ +K++    F      DV+  +  ++   K G +++A   F+++P RD+ ++N
Sbjct: 147 KACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWN 206

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
           AM+ G  + G  ++ +  FR M+   V    ++   VLSV    G L  GR +H    K 
Sbjct: 207 AMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKM 266

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G+   V+V N+LI MY  C  + DA ++FE  +    D  S+N ++      G  +  L 
Sbjct: 267 GYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREK--DIFSWNSIVSVHEQCGDHDGTLR 324

Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS------VSNA 328
               ML A ++P  +T  +V+ AC        G ++H   + SG            + NA
Sbjct: 325 LLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNA 384

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MY+ CG + +A ++F R+  KD+ SWN MI  Y     G  A+  +  M  V ++PD
Sbjct: 385 VIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPD 444

Query: 389 EFTFGSLLAS---SGFIE-----MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           E TF  +L++   +GF+      +V+M   +     +   I+    +I    +  ++ +A
Sbjct: 445 EVTFVGVLSACSHAGFVSQGRNFLVQMKSKY----DVAPTIEHYTCVIDMLGRAGQLDEA 500

Query: 441 YQIFHNMS-PRNIITWNTLI 459
           Y++   M    N + W  L+
Sbjct: 501 YELALTMPIEANPVVWRALL 520



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 55/374 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   ++ G ++  L  F ++ +   + P  ++++  L+  A + +   G  +H +A+
Sbjct: 206 NAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAM 264

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V+N+++ +Y   + +     +F  ++  D++SW + +S   + G  D    
Sbjct: 265 KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLR 324

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AG 202
           + D+M                      +G G         ++ D  +  +VL  C   A 
Sbjct: 325 LLDRM----------------------LGAG---------IQPDLVTVTTVLPACSHLAA 353

Query: 203 LLEFGRQLHSLVTKSGFSC------LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           L+  GR++H  +  SG          V + NA+I MY  CG++ DA  VFE       D 
Sbjct: 354 LMH-GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK--DV 410

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ--- 313
            S+N+M+ G    G   EAL  F  M    L+P E+TFV V+SA  C   G+    +   
Sbjct: 411 ASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA--CSHAGFVSQGRNFL 468

Query: 314 -AMKSGFEAYTSVSN--AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNL 369
             MKS ++   ++ +    I M    G++DEA  +   +  E + V W  ++   A   L
Sbjct: 469 VQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL---AACRL 525

Query: 370 GRSAILAYLEMQSV 383
            + A+LA +  Q V
Sbjct: 526 HKHAVLAEVAAQRV 539



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 34/280 (12%)

Query: 476 SELLMSELRPDEYTLSVA-LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           S  + S  +P   T  +A L + A   +L  GK+IH Y+L N  ++      ++I +Y+K
Sbjct: 25  STAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSK 84

Query: 535 CGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           C  ++ +L +F +   E +  ++NA+IS +  +G  +E    ++ M++ G I PD+ TF 
Sbjct: 85  CNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI-PDKFTFP 143

Query: 594 AVLSAC--------SHAGLVDDGTR----IFDSMVNDY-----------GF--IPAEDHL 628
             + AC         H  L   G      I  ++VN Y            F  +P  D +
Sbjct: 144 CAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVV 203

Query: 629 --SCMLDLLGRAGYLD---EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             + M++   + G  +   E  R +N + +         + S  A  G+L  GRII G  
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263

Query: 684 LEREQDKP-SVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
           ++   D   +V   L ++Y      E+A  I E+++   +
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDI 303


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 178/512 (34%), Positives = 268/512 (52%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ +C      + G Q+H   +
Sbjct: 31  WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90

Query: 316 KSGFEAYTSVSNAAITMY-------------------------------SSCGKIDEACM 344
           K G+E    V  + I+MY                               +S G I+ A  
Sbjct: 91  KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  +  KD+VSWN MIS Y +    + A+  + EM    +RPDE T  +++   A SG 
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +N+++ NALI  Y+K   ++ A  +F  +S +++I+WN LI G
Sbjct: 211 IELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGG 270

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K    + 
Sbjct: 271 YTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVT 330

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +Y+KCGD++ + +VFN M+ K   +WNA+I  +A HG    A   F  M
Sbjct: 331 NASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRM 390

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +    IKPD  TF  +LSACSHAG++D G  IF SM ++Y   P  +H  CM+DLLG +G
Sbjct: 391 RK-NEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSG 449

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +I++  ++     W +L  AC  HGN+ LG   A  L + E + P  YVLLSN
Sbjct: 450 LFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSN 509

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E A IR LL   G+ K PGCS I
Sbjct: 510 IYATAGRWNEVARIRGLLNDKGMKKVPGCSSI 541



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 251/523 (47%), Gaps = 45/523 (8%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           + YA  VF+ + + +L ++N M  G   +      + L+  M  L +  ++Y+F  +L  
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE--------- 248
           C      + G Q+H  V K G+   + V  +LI+MY     + DA KVF+          
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 249 --------AKGY------------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
                   ++GY            V D +S+N M+ G    G  +EAL  F++M+  ++R
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 289 PSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P E T V+V+SA        +G QVH+     GF +   + NA I  YS CG+++ AC +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           F  L  KD++SWN +I  Y   NL + A+L + EM   G  P++ T  S+L   A  G I
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 403 EMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           ++   IH ++   + G+     +  +LI  Y+K   I+ A+Q+F++M  +++  WN +I 
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           GF ++G        FS +  +E++PD+ T    LS+C+    L  G+ I   +  N  I+
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432

Query: 521 -KMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
            K+     MI L    G   +    +  M +E D + W +L+ A   HG  +      K 
Sbjct: 433 PKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE---KF 489

Query: 579 MQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVNDYG 620
            Q++ +I+P+      +LS   + AG  ++  RI   ++ND G
Sbjct: 490 AQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARI-RGLLNDKG 531



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 217/426 (50%), Gaps = 15/426 (3%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           L P+ Y+    L +CA L+ +  G Q+H + L+ G +   +V  +++S+Y     L    
Sbjct: 59  LLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAH 118

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           +VF    + DV S+T  ++     G+++ A  +FD++P +D+  +NAMI+G  E G    
Sbjct: 119 KVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKE 178

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
            + LF+EM K +VR D  +  +V+S    +G +E GRQ+HS +   GF   + +VNALI 
Sbjct: 179 ALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALID 238

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            Y  CG +  AC +F        D IS+N+++ G   +   +EAL+ F++ML +   P++
Sbjct: 239 FYSKCGEMETACGLFLGLS--YKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPND 296

Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           +T +S++ AC       +G  +H    K   G    +S+  + I MYS CG I+ A  +F
Sbjct: 297 VTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVF 356

Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
             +  K + +WN MI  +A      +A   +  M+   I+PD+ TF  LL++     M++
Sbjct: 357 NSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLD 416

Query: 407 M-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNIITWNTLIN 460
           +  H F  +     I   ++    +I     +   K+A ++   M+  P  +I W +L+ 
Sbjct: 417 LGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVI-WCSLLK 475

Query: 461 GFLLNG 466
              ++G
Sbjct: 476 ACKMHG 481



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 180/367 (49%), Gaps = 41/367 (11%)

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
           A  +F  +QE +++ WNTM   +A      SA+  Y+ M S+G+ P+ +TF  LL S   
Sbjct: 16  AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75

Query: 402 IEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-------- 450
           ++  +    IH  V   G   ++ V  +LIS Y +NER++ A+++F   S R        
Sbjct: 76  LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135

Query: 451 -----------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                  ++++WN +I+G++  G   + L+ F E++ + +RPDE
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T+   +S+ AR  S+  G+Q+H ++  +   S + + NA+I  Y+KCG+++ +  +F  
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD ISWN LI  Y      KEA+  F+ M   G   P+  T  ++L AC+H G +D 
Sbjct: 256 LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGE-SPNDVTMLSILHACAHLGAIDI 314

Query: 608 GTRI---FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           G  I    D  +   G   A    + ++D+  + G ++ A +V NS  +      W A+ 
Sbjct: 315 GRWIHVYIDKRLK--GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNAMI 371

Query: 665 SACAAHG 671
              A HG
Sbjct: 372 FGFAMHG 378



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 37/304 (12%)

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
           E +  A  +F  +   N++ WNT+  G  L+  PV  L+ +  ++   L P+ YT    L
Sbjct: 11  EGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLL 70

Query: 495 SSCARISSLRHGKQIHGYVLK----------NNLISKMSLGN------------------ 526
            SCA++ + + G QIHG+VLK           +LIS M + N                  
Sbjct: 71  KSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLIS-MYVQNERLEDAHKVFDRSSHRDV 129

Query: 527 ----AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
               A++T YA  G ++ +  +F+ +  KD +SWNA+IS Y + G  KEA+  FK M   
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
             ++PD++T   V+SA + +G ++ G ++  S + D+GF      ++ ++D   + G ++
Sbjct: 190 N-VRPDESTMVTVISASARSGSIELGRQV-HSWIADHGFGSNLKIVNALIDFYSKCGEME 247

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
            A  +     +  +    W +      H NL    ++    + R  + P+   +LS ++A
Sbjct: 248 TACGLFLG--LSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHA 305

Query: 703 AAGL 706
            A L
Sbjct: 306 CAHL 309


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  305 bits (780), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 176/512 (34%), Positives = 267/512 (52%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ +C      R G Q+H   +
Sbjct: 56  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--------------------------- 348
           K G++    V  + I+MY   G++++A  +F +                           
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175

Query: 349 ----LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
               +  KD+VSWN MIS YA+    + A+  + EM    +RPDE T  S++   A S  
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +N+++ NALI  Y K   ++ A  +F  +S +++I+WNTLI G
Sbjct: 236 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 295

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K    + 
Sbjct: 296 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 355

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  S   ++I +YAKCGD++ + +VF+ ++ +   SWNA+I  +A HG    A   F  M
Sbjct: 356 NASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRM 415

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +    I+PD  TF  +LSACSH+G++D G  IF SM  DY   P  +H  CM+DLLG +G
Sbjct: 416 RK-NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG 474

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +IN+  ++     W +L  AC  HGN+ LG   A  L++ E   P  YVLLSN
Sbjct: 475 LFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSN 534

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E A IR LL   G+ K PGCS I
Sbjct: 535 IYATAGRWNEVAKIRALLNDKGMKKVPGCSSI 566



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 158/541 (29%), Positives = 261/541 (48%), Gaps = 48/541 (8%)

Query: 124 YSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           Y+ +  +  C    H D   YA  VF+ + + +L ++N M  G   +      + L+  M
Sbjct: 20  YALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCM 79

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L +  + Y+F  +L  C  +     G+Q+H  V K G+   + V  +LI+MY   G +
Sbjct: 80  ISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRL 139

Query: 240 VDACKVFEE-----------------AKGYVC------------DHISYNVMMDGLASVG 270
            DA KVF++                 +KGY+             D +S+N M+ G A  G
Sbjct: 140 EDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETG 199

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
             +EAL  F++M+  ++RP E T VSV+SAC       +G QVH+     GF +   + N
Sbjct: 200 NNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVN 259

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I +Y  CG+++ AC +F  L  KD++SWNT+I  Y   NL + A+L + EM   G  P
Sbjct: 260 ALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 319

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQ 442
           ++ T  S+L   A  G IE+   IH ++   + G+        +LI  YAK   I+ A Q
Sbjct: 320 NDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQ 379

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F ++  R++ +WN +I GF ++G        FS +  +E+ PD+ T    LS+C+    
Sbjct: 380 VFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGM 439

Query: 503 LRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
           L  G+ I   + ++  I+ K+     MI L    G    +  + N M +E D + W +L+
Sbjct: 440 LDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLL 499

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVNDY 619
            A   HG  +   S     Q++ +I+P       +LS   + AG  ++  +I  +++ND 
Sbjct: 500 KACKMHGNVELGES---YAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKI-RALLNDK 555

Query: 620 G 620
           G
Sbjct: 556 G 556



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 232/464 (50%), Gaps = 17/464 (3%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL+L+V +  S  L P+ Y+    L +CA  +    G Q+H + L+ G     +V  +++
Sbjct: 72  ALYLYVCM-ISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLI 130

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L   ++VF +  + DV S+T  ++     G++  A ++FD++P +D+  +NA
Sbjct: 131 SMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNA 190

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF+EM K +VR D  +  SV+S C  +  +E GRQ+HS +   G
Sbjct: 191 MISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG 250

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VNALI +Y  CG V  AC +FE       D IS+N ++ G   +   +EAL+ 
Sbjct: 251 FGSNLKIVNALIDLYIKCGEVETACGLFEGLS--YKDVISWNTLIGGYTHMNLYKEALLL 308

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITMY 333
           F++ML +   P+++T +S++ AC       +G  +H    K   G    +S   + I MY
Sbjct: 309 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMY 368

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG I+ A  +F  +  + + SWN MI  +A      +A   +  M+   I PD+ TF 
Sbjct: 369 AKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFV 428

Query: 394 SLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHN--M 447
            LL++     M+++  H F  +     I   ++    +I     +   K+A ++ +   M
Sbjct: 429 GLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEM 488

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-PDEYTL 490
            P  +I W +L+    ++G    G  +   L+  E + P  Y L
Sbjct: 489 EPDGVI-WCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVL 531



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 195/402 (48%), Gaps = 44/402 (10%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE---ACMIFARLQEKDIVSWNTMISTYAQ 366
           +HAQ +K+G        +  I         D    A  +F  +QE +++ WNTM   +A 
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQV 423
            +   SA+  Y+ M S+G+ P+ +TF  LL   A S      + IH  V   G   ++ V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPR-------------------------------NI 452
             +LIS Y +N R++ A ++F   S R                               ++
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
           ++WN +I+G+   G   + L+ F E++ + +RPDE T+   +S+CA+ +S+  G+Q+H +
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
           +  +   S + + NA+I LY KCG+++ +  +F  +  KD ISWN LI  Y      KEA
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND--YGFIPAEDHLSC 630
           +  F+ M   G   P+  T  ++L AC+H G ++ G R     +N    G   A  H + 
Sbjct: 306 LLLFQEMLRSGE-SPNDVTMLSILPACAHLGAIEIG-RWIHVYINKRLKGVANASSHRTS 363

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHG 671
           ++D+  + G ++ A++V +S  I  RS  +W A+    A HG
Sbjct: 364 LIDMYAKCGDIEAAQQVFDS--ILNRSLSSWNAMIFGFAMHG 403


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 195/620 (31%), Positives = 313/620 (50%), Gaps = 39/620 (6%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL----DVRRDNY 190
           + G V  A ++F++M +RD+  + A+++GC  NG    G+    EM +L      R ++ 
Sbjct: 161 RCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSR 220

Query: 191 SFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           +  S L  C     L  GR LH    K G      V++AL +MY  C +  DAC +F E 
Sbjct: 221 TMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPEL 280

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVG-- 307
                D +S+  ++      G + EA+  F++M+ + L+P +     V+ +CL   +G  
Sbjct: 281 PEK--DVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDD-----VLVSCLLSGLGNS 333

Query: 308 ------YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
                    HA  MK  F     V NA I+MY     +D A  +F  L ++D  SWN MI
Sbjct: 334 GNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMI 393

Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTF----GSLLAS-SGFIEMVEM-----IHAF 411
             Y +       +  Y EMQ      D + F     SL+++ S    +VE+      H +
Sbjct: 394 VGYCKAGCDVKCLELYREMQF----RDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCY 449

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQ 470
              + +  +  V+N LI  Y +  +   A +IF     + +++TWNTLI+ +   G    
Sbjct: 450 SIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNT 509

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            +  + ++L   L P+  TL   +S+CA + +L  G++IH YV +      +S+  A+I 
Sbjct: 510 AVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALID 569

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAKCG L  + R+F+ M++ D ++WN +IS Y  HGE K+A+  F  M+  G IKP+  
Sbjct: 570 MYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG-GSIKPNGV 628

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF A+LSAC H+GL+++G ++F  M   Y   P   H +CM+DLLG++G+L EAE ++ +
Sbjct: 629 TFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 687

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
             ++     W  L SAC  H +  +G  IA      + +    Y+L+SN Y +A  W+E 
Sbjct: 688 MPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEI 747

Query: 711 ANIRELLKRTGVIKQPGCSW 730
             +RE +K  GV  Q G  W
Sbjct: 748 EKLREAMKNHGV--QKGAGW 765



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 178/626 (28%), Positives = 291/626 (46%), Gaps = 36/626 (5%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI--GIGL 176
           Q PD+ +    +SA +  G    A   F   P  D  ++N++I   T +   D    +  
Sbjct: 42  QRPDIVA--KLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIR--THHCASDFVAALNA 97

Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCL----VSVVNALIT 231
            R M     R   ++     S          G  +H+   + G   +    V+V ++L+ 
Sbjct: 98  HRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVY 157

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASL 287
           MY  CG V DA K+FEE +    D +++  ++ G    G   + L    +M+        
Sbjct: 158 MYARCGVVRDAVKLFEEMRER--DVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKA 215

Query: 288 RPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           RP+  T  S + AC        G  +H  A+K G      V +A  +MYS C   ++AC 
Sbjct: 216 RPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACS 275

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGF 401
           +F  L EKD+VSW ++I  Y  R L R A+  + EM   G++PD+     LL+   +SG 
Sbjct: 276 LFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGN 335

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   +  HA +       N+ V NALIS Y K E +  A ++F  +  R+  +WN +I G
Sbjct: 336 VHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVG 395

Query: 462 FLLNGFPVQGLQHFSELLMS---ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           +   G  V+ L+ + E+      E   D  +L  A+SSC+R+  LR G+  H Y +K+ L
Sbjct: 396 YCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWL 455

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFK 577
               S+ N +I +Y +CG  D + ++F +  ++ D ++WN LIS+YA  G    AVS + 
Sbjct: 456 DEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYD 515

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
            M   G + P+  T   V+SAC++   ++ G +I  S V + G+       + ++D+  +
Sbjct: 516 QMLTEG-LTPNSTTLITVISACANLVALERGEKIH-SYVKEMGWDYDVSINTALIDMYAK 573

Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
            G L  A R+ +S  +Q     W  + S    HG  +    + G  +E    KP+    L
Sbjct: 574 CGQLGTARRIFDSM-LQHDVVAWNVMISGYGMHGEAKQALELFG-KMEGGSIKPNGVTFL 631

Query: 698 SNIYAA--AGLWEEAANIRELLKRTG 721
           + + A   +GL EE    R+L  R G
Sbjct: 632 AILSACCHSGLLEEG---RQLFTRMG 654



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 255/551 (46%), Gaps = 48/551 (8%)

Query: 33  RSGHYQDALHLFVQ---IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK 89
           R+G   D L   V+   +    K +P+  ++ + L AC  L     G  LH YA++ G+ 
Sbjct: 192 RNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVG 251

Query: 90  AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
             P V + + S+Y           +F E+   DV SWT+ +      G +  A E     
Sbjct: 252 DSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAME----- 306

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGR 208
                                     LF+EM +  ++ D+   + +LS + ++G +  G+
Sbjct: 307 --------------------------LFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGK 340

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
             H+++ K  F   V V NALI+MY     V +A +VF        D  S+N+M+ G   
Sbjct: 341 AFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDAD--SWNLMIVGYCK 398

Query: 269 VGRVEEALIRFRDMLVASLRP---SELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAY 322
            G   + L  +R+M             + VS +S+C   +  R+G   H  ++K   +  
Sbjct: 399 AGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDED 458

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
           +SV+N  I MY  CGK D AC IF   + K D+V+WNT+IS+YA      +A+  Y +M 
Sbjct: 459 SSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQML 518

Query: 382 SVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           + G+ P+  T  +++++      +E  E IH++V   G   ++ ++ ALI  YAK  ++ 
Sbjct: 519 TEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLG 578

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A +IF +M   +++ WN +I+G+ ++G   Q L+ F ++    ++P+  T    LS+C 
Sbjct: 579 TARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACC 638

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWN 557
               L  G+Q+   + K +L   +     M+ L  K G L +    V  M +E D   W 
Sbjct: 639 HSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWG 698

Query: 558 ALISAYAQHGE 568
            L+SA   H +
Sbjct: 699 TLLSACKLHDD 709



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 180/363 (49%), Gaps = 14/363 (3%)

Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
           +VHA A+ SG      +    ++ YSS G+   A + F+     D   WN++I T+   +
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT----NI 421
              +A+ A+  M +   RP  FT     +++  +  + +   +HA+    G++     ++
Sbjct: 90  DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM- 480
            V ++L+  YA+   ++ A ++F  M  R+++ W  +++G + NG    GL++  E++  
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209

Query: 481 ---SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
               + RP+  T+   L +C  +  L  G+ +HGY +K  +     + +A+ ++Y+KC  
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            + +  +F  + EKD +SW +LI  Y   G  +EA+  F+ M + G ++PD    + +LS
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESG-LQPDDVLVSCLLS 328

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
              ++G V  G + F +++    F       + ++ + G+   +D A RV    H Q  +
Sbjct: 329 GLGNSGNVHGG-KAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLH-QRDA 386

Query: 658 DNW 660
           D+W
Sbjct: 387 DSW 389



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 154/346 (44%), Gaps = 41/346 (11%)

Query: 25  NISLANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAY 82
           N+ +    ++G     L L+  +Q   +++   D  SL + +++C+ L     G   H Y
Sbjct: 390 NLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCY 449

Query: 83  ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDY 141
           +++  L     VAN ++ +Y          ++F   +   DV +W T +S+   +GH + 
Sbjct: 450 SIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNT 509

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-D 200
           A  ++D+M          +  G T N                     + +  +V+S C +
Sbjct: 510 AVSLYDQM----------LTEGLTPN---------------------STTLITVISACAN 538

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
              LE G ++HS V + G+   VS+  ALI MY  CG +  A ++F+    +  D +++N
Sbjct: 539 LVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQH--DVVAWN 596

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS 317
           VM+ G    G  ++AL  F  M   S++P+ +TF++++SAC    +   G Q+  +  K 
Sbjct: 597 VMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKY 656

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMIS 362
             E         + +    G + EA  M+ A   E D   W T++S
Sbjct: 657 SLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLS 702



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 127/325 (39%), Gaps = 81/325 (24%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +++ +  GH   A+ L+ Q+  +  L P+  +L T ++ACANL     G ++H+Y  
Sbjct: 495 NTLISSYAHLGHSNTAVSLYDQM-LTEGLTPNSTTLITVISACANLVALERGEKIHSYVK 553

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G      +   ++ +Y     L + +R+F  +   DV +W   +S     G    A E
Sbjct: 554 EMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALE 613

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGL 203
           +F KM                E G                ++ +  +F ++LS  C +GL
Sbjct: 614 LFGKM----------------EGG---------------SIKPNGVTFLAILSACCHSGL 642

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           LE GRQL + + K                                 K Y C       M+
Sbjct: 643 LEEGRQLFTRMGKYSLE--------------------------PNLKHYAC-------MV 669

Query: 264 DGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGF 319
           D L   G ++EA     DM++A  + P    + +++SAC       +G ++  +A  S  
Sbjct: 670 DLLGKSGHLQEA----EDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDA 725

Query: 320 EA---YTSVSNAAITMYSSCGKIDE 341
           E    Y  +SN+    Y S  K DE
Sbjct: 726 ENEGYYILISNS----YGSAKKWDE 746


>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
           mitochondrial-like [Vitis vinifera]
          Length = 623

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 172/567 (30%), Positives = 290/567 (51%), Gaps = 77/567 (13%)

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
           G +  A ++F+E      D +++N M+   + +G  ++AL  F  M +A+ RP   TF +
Sbjct: 19  GRITSARRLFDEMPHK--DTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTA 76

Query: 297 VMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC----------------- 336
            +SAC      R G ++HAQ + SG ++   V N+ I MY  C                 
Sbjct: 77  TLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMN 136

Query: 337 --------------GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
                         G  D A ++F  + +K  ++WN MIS Y Q       +  + +M+ 
Sbjct: 137 EVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMRE 196

Query: 383 VGIRPDEFTFGSLLASSGFIEMVE-----MIHAFVFINGIITNIQVSNALISAYAK---- 433
             ++PD++TF +L+  +   E+ E     M+H F+  +G +  ++VSN+++S Y+K    
Sbjct: 197 DSLQPDQWTFSALV--NALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCK 254

Query: 434 ------------------NERIK---------QAYQIFHNMSPRNIITWNTLINGFLLNG 466
                             N  I          +A+ +F     +N+++W ++I G+  NG
Sbjct: 255 DDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNG 314

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              Q L  F +++ + ++PD++T    L +C+ +++L HGK IHG ++     + + +GN
Sbjct: 315 HGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGN 374

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
            ++ +YAKCGD+  S   F  ++ KD +SWNA++     HG   +A+  ++ M   G +K
Sbjct: 375 GLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASG-MK 433

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD+ TF  +L  CSH+GL++ G  +F+SMV+ YG     +H+ CM+DLLGR GYL +A  
Sbjct: 434 PDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARE 493

Query: 647 VINSQHIQARSDNWW--ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           +++      R++     AL  AC AH  +R+G  +   L   E  K   YVLLSN+Y  +
Sbjct: 494 LVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVS 553

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G W+EA  +R+ +   GV K PGCSWI
Sbjct: 554 GQWKEAEMVRKTMTDHGVKKMPGCSWI 580



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 219/458 (47%), Gaps = 42/458 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA+ S+ G +Q AL LF  +  ++  +PD ++ + TL+ACA L     G ++HA  +
Sbjct: 40  NAMLASYSQLGLHQQALCLFHHMRIANS-RPDRFTFTATLSACAGLGELRRGMKIHAQVV 98

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +G ++   V N+++ +Y       S +RVF E+   +  SW + L A T  G  D A  
Sbjct: 99  VSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARV 158

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGL 203
           VFD MP +    +N MI+G  + G  ++ +GLF++M +  ++ D ++F++++ ++C+   
Sbjct: 159 VFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQE 218

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             +G  +H  + KSG+   V V N++++ Y   G   D  KVFE     +   +S+N M+
Sbjct: 219 PSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIG--ILTQVSWNAMI 276

Query: 264 D-------------------------------GLASVGRVEEALIRFRDMLVASLRPSEL 292
           D                               G A  G  E+AL  F  M+   ++P + 
Sbjct: 277 DAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDF 336

Query: 293 TFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF +V+ AC        G  +H   +  GF AY  V N  + MY+ CG I  +   F  +
Sbjct: 337 TFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI 396

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVE 406
             KD+VSWN M+           A+  Y EM + G++PD+ TF  LL +   SG IE  +
Sbjct: 397 LGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQ 456

Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            +  + V + G+    +    ++    +   + QA ++
Sbjct: 457 ALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 494



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 71/456 (15%)

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           ++  T+ + A  K+G +  A  +FD+MP +D   +NAM+   ++ G     + LF  M  
Sbjct: 5   LFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRI 64

Query: 183 LDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            + R D ++F + LS C AGL E   G ++H+ V  SG    + V N+LI MY  C +  
Sbjct: 65  ANSRPDRFTFTATLSAC-AGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSAT 123

Query: 241 DACKVFEEAK------------GYVCD-----------------HISYNVMMDGLASVGR 271
            A +VFEE               Y                     I++N+M+ G    G 
Sbjct: 124 SARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGD 183

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTSVSN 327
           VE  L  F+ M   SL+P + TF ++++A LC    P  GY +H   +KSG+     VSN
Sbjct: 184 VELCLGLFKKMREDSLQPDQWTFSALVNA-LCELQEPSYGYMMHGFIIKSGWVKAVEVSN 242

Query: 328 AAITMYSSCGKID-------------------------------EACMIFARLQEKDIVS 356
           + ++ YS  G  D                               EA ++F    EK++VS
Sbjct: 243 SILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVS 302

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVF 413
           W +MI+ YA+   G  A+  +++M    I+PD+FTFG++L +   +  +   +MIH  + 
Sbjct: 303 WTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII 362

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
             G    + V N L++ YAK   I+ +   F  +  +++++WN ++ G  ++G   Q L+
Sbjct: 363 HYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALE 422

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
            + E++ S ++PD+ T    L +C+    +  G+ +
Sbjct: 423 LYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQAL 458



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 145/285 (50%), Gaps = 4/285 (1%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K++ +  NI ++   + G  +  L LF ++     L+PD ++ S  + A   L+  ++G 
Sbjct: 165 KKVEIAWNIMISGYGQCGDVELCLGLFKKMRED-SLQPDQWTFSALVNALCELQEPSYGY 223

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
            +H + +++G      V+N+ILS Y        V +VF  I      SW   + A  K+G
Sbjct: 224 MMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIG 283

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
               A  VF   P++++  + +MITG   NG+ +  +  F +M +  ++ D+++F +VL 
Sbjct: 284 DTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLH 343

Query: 198 VCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
            C +   L  G+ +H  +   GF   V V N L+ MY  CG++  +   F+E  G   D 
Sbjct: 344 ACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGK--DL 401

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +S+N M+ GL   G   +AL  + +M+ + ++P ++TF+ ++  C
Sbjct: 402 VSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTC 446



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 146/320 (45%), Gaps = 41/320 (12%)

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
           + + I A AK  RI  A ++F  M  ++ + WN ++  +   G   Q L  F  + ++  
Sbjct: 8   TTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANS 67

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-------- 535
           RPD +T +  LS+CA +  LR G +IH  V+ +   S + +GN++I +Y KC        
Sbjct: 68  RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARR 127

Query: 536 -----------------------GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
                                  G  D +  VF+ M +K  I+WN +IS Y Q G+ +  
Sbjct: 128 VFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELC 187

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
           +  FK M++   ++PDQ TF+A+++A         G  +   ++   G++ A +  + +L
Sbjct: 188 LGLFKKMRE-DSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKS-GWVKAVEVSNSIL 245

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
               + G  D+  +V  S  I  +  +W A+  A     ++++G      L+ +   + +
Sbjct: 246 SFYSKLGCKDDVMKVFESIGILTQV-SWNAMIDA-----HMKIGDTHEAFLVFQLAPEKN 299

Query: 693 VYVLLSNI--YAAAGLWEEA 710
           V    S I  YA  G  E+A
Sbjct: 300 VVSWTSMITGYARNGHGEQA 319


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 179/515 (34%), Positives = 277/515 (53%), Gaps = 21/515 (4%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVAS-LR 288
           MY  CG +  AC+VF    G + D   +S+  +M G    G     L    +M  AS   
Sbjct: 1   MYVKCGELDLACEVF----GGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAA 56

Query: 289 PSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           P+E T  + + AC        G  +H   +++G++ +  V+++ + +YS  G+I +A  +
Sbjct: 57  PNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRV 116

Query: 346 F--ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ--SVGIRPDEFTFGSLL-ASSG 400
           F  A L    I +WN M+S YA    GR A+L + EM+      +PDEFTF SLL A SG
Sbjct: 117 FDGAGLG-SGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSG 175

Query: 401 FIEMVE--MIHAFVFINGIIT--NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
                E   +HA +  +G  T  N  ++ AL+  Y K  R+  A Q+F  +  +N+I W 
Sbjct: 176 LGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWT 235

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
            ++ G    G   + L+ F     S  RPD + LS  +   A  + +  G+Q+H Y +K+
Sbjct: 236 AVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKD 295

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
              + +S GN+++ +Y KCG  D + R+F  M   + +SW  +++   +HG G+EAV+ F
Sbjct: 296 PTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALF 355

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
           + M+  G ++PD+ T+ A+LSACSHAGLVD+  R F  +  D    P  +H +CM+DLLG
Sbjct: 356 EEMR-AGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLG 414

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           RAG L EA  +I +  ++     W  L SAC  H ++ +GR    +LL  + D P  YV 
Sbjct: 415 RAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVT 474

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LSN+ A AG W E   +R+ ++R G+ KQ GCSW+
Sbjct: 475 LSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWV 509



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 18/462 (3%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNYSF- 192
           K G +D ACEVF  M DR++  + A++ G   +G     + L  EM    +   + Y+  
Sbjct: 4   KCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLS 63

Query: 193 ASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           AS+ + C  G    G  +H L  ++G+     V ++L+ +Y   G + DA +VF+ A G 
Sbjct: 64  ASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA-GL 122

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVG 307
                ++N M+ G A  G   +AL+ FR+M       +P E TF S++ AC      R G
Sbjct: 123 GSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREG 182

Query: 308 YQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            QVHA    SGF   ++  ++ A + MY  C ++  A  +F RL+ K+++ W  ++  +A
Sbjct: 183 AQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHA 242

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFINGIITNIQ 422
           Q      A+  +      G RPD     S   +LA    +E    +H +   +   T++ 
Sbjct: 243 QEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVS 302

Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
             N+++  Y K     +A ++F  M   N+++W T++NG   +G   + +  F E+    
Sbjct: 303 AGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGG 362

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCS 541
           + PDE T    LS+C+    +   ++    + ++  +   +   A M+ L  + G+L  +
Sbjct: 363 VEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREA 422

Query: 542 LRVFNMMIEKDTIS-WNALISAYAQHGE---GKEAVSCFKAM 579
             +   M  + T+  W  L+SA   H +   G+EA     AM
Sbjct: 423 RDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAM 464



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 179/383 (46%), Gaps = 42/383 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G     L L  ++ ++ +  P+ Y+LS +L AC  + + A G  +H   +RAG + + 
Sbjct: 35  RHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHD 94

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
            VA++++ +Y     +   +RVF        + +W                         
Sbjct: 95  VVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATW------------------------- 129

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREM--HKLDVRRDNYSFASVLSVCDA-GLLEFGR 208
                 NAM++G    G+    + +FREM  H+   + D ++FAS+L  C   G    G 
Sbjct: 130 ------NAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGA 183

Query: 209 QLHSLVTKSGFSCLVSVV--NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           Q+H+ +T SGFS   + +   AL+ MY  C  +  A +VFE  +    + I +  ++ G 
Sbjct: 184 QVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERK--NVIQWTAVVVGH 241

Query: 267 ASVGRVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
           A  G+V EAL  FR    +  RP      + V V++       G QVH   +K       
Sbjct: 242 AQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDV 301

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           S  N+ + MY  CG  DEA  +F  ++  ++VSW TM++   +  LGR A+  + EM++ 
Sbjct: 302 SAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 361

Query: 384 GIRPDEFTFGSLLASSGFIEMVE 406
           G+ PDE T+ +LL++     +V+
Sbjct: 362 GVEPDEVTYLALLSACSHAGLVD 384



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 115/299 (38%), Gaps = 68/299 (22%)

Query: 4   RRITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTT 63
           RR+   +       ++ +++    +   ++ G   +AL LF +   S   +PD + LS+ 
Sbjct: 214 RRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS-GARPDSHVLSSV 272

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDV 123
           +   A+      G Q+H Y ++          N+I+ +Y         +R+F E++ P+V
Sbjct: 273 VGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNV 332

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            SWTT                               M+ G  ++G     + LF EM   
Sbjct: 333 VSWTT-------------------------------MVNGLGKHGLGREAVALFEEMRAG 361

Query: 184 DVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
            V  D  ++ ++LS C  AGL++  R+                       YF+C  +   
Sbjct: 362 GVEPDEVTYLALLSACSHAGLVDECRR-----------------------YFSC--IRRD 396

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             V  +A+ Y C       M+D L   G + EA    R M    + P+   + +++SAC
Sbjct: 397 RTVRPKAEHYAC-------MVDLLGRAGELREARDLIRTM---PMEPTVGVWQTLLSAC 445


>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 218/741 (29%), Positives = 370/741 (49%), Gaps = 96/741 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++ L RSG  ++A+ +F+Q+        +I + ++ ++A A     A   +L     
Sbjct: 19  NLRISQLGRSGRIEEAVAVFLQMTER-----NIVTYNSMISAYAKNGRIANARELFDLMP 73

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  L ++    N++++ Y +   +    R+F  +   D+YSWT  ++  T++G ++ A E
Sbjct: 74  QRNLVSW----NSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129

Query: 145 VFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLFREMHKL---DVRRDNYSFASVLS-VC 199
           +F+ +PD+ D    NA+I G  +         LFRE  KL    + ++  S+ S+LS   
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKR-------LFREAKKLFDEMLVKNVVSWNSILSGYT 182

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G ++ G Q    + +      V   N ++  Y   G++  A   F++      + +S+
Sbjct: 183 KNGKMQLGLQFFEAMGERN----VVSWNLMVDGYVGVGDLDSAWMFFKKIP--TPNVVSW 236

Query: 260 NVMMDGLASVGRVEEA-----------LIRFRDMLVASLRPSEL---------------- 292
             M+ G A  GR+ EA           L+ +  M+ A +R +++                
Sbjct: 237 VTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV 296

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS--NAAITMYSSCGKIDEACMIFARLQ 350
           ++ ++++  +  RVG  + A+ + +    Y +++   A I  Y   G++DEA  IF+++ 
Sbjct: 297 SWTAMINGYV--RVGKLLQAREILN-LMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
            +D V WN+MI+ YA    GR+               DE       A   F EMV     
Sbjct: 354 VRDSVCWNSMITGYAH--CGRT---------------DE-------ALRLFQEMV----- 384

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                    ++   N +I+AYA+  ++ +A ++F+ M  RN+++WN+LI G++ NG   +
Sbjct: 385 -------CKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFE 437

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F  +     +PD+ T+   L + A +++L  G Q+H   +K    + + + NA++T
Sbjct: 438 ALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILT 497

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAK G +  +  VF  +  KD +SWN+LI+ YA +G GKEAV  F+ M   G I PD+ 
Sbjct: 498 MYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG-IIPDEV 556

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT +LSAC+H G VD G  +F SM   Y   P  +H +C+++LLGR G L+EA  ++  
Sbjct: 557 TFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQG 616

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
               + +  W AL  AC  H NL L +  A  LL  E    S YVLLSN++A AG W+  
Sbjct: 617 MKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMV 676

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R L+K     KQPGCSWI
Sbjct: 677 ERVRVLMKENKAEKQPGCSWI 697



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 197/469 (42%), Gaps = 97/469 (20%)

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--------------- 365
           +Y    N  I+     G+I+EA  +F ++ E++IV++N+MIS YA               
Sbjct: 13  SYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLM 72

Query: 366 -QRNL--GRSAILAYLEMQSVG---------IRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
            QRNL    S I  YL  + V           + D +++  ++     I  +E       
Sbjct: 73  PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFN 132

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +     +    NALI+ YAK    ++A ++F  M  +N+++WN++++G+  NG    GLQ
Sbjct: 133 LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQ 192

Query: 474 HFSEL---------LMSE------------------LRPDEYTLSVALSSCARISSLRHG 506
            F  +         LM +                    P+  +    LS  A    +   
Sbjct: 193 FFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEA 252

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + +   +   NL+S     NAMI  Y +   +D + ++F  M EKD++SW A+I+ Y + 
Sbjct: 253 RNLFNEMPTKNLVS----WNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRV 308

Query: 567 GEGKEAVSCFKAMQ---------------DVGRIKP-----------DQATFTAVLSACS 600
           G+  +A      M                  GR+             D   + ++++  +
Sbjct: 309 GKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYA 368

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARS- 657
           H G  D+  R+F  MV        +D +S   M+    +AG +D+A  + N   +Q R+ 
Sbjct: 369 HCGRTDEALRLFQEMV-------CKDMVSWNTMIAAYAQAGQMDKALEMFN--EMQERNV 419

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            +W +L +    +G L    +   +L++++ +KP    ++  + A+A L
Sbjct: 420 VSWNSLITGYVQNG-LYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 175/560 (31%), Positives = 301/560 (53%), Gaps = 15/560 (2%)

Query: 180 MHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
           M +  +  D +   S+++ C     LE GR+LH  +  +GF   + +  AL+ MY  CG+
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
           + DA +VFE  +  + D  +++ ++   A  GR E A++ +R M+   + P+ +TF   +
Sbjct: 61  LDDAKRVFEGME--IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACAL 118

Query: 299 SACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
             C        G  +H + + S       + ++ + MY  C ++ EA  +F  ++ +++ 
Sbjct: 119 GGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVR 178

Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEFTFGSLLASS---GFIEMVEMIHAF 411
           S+  MIS Y Q      A+  +  M  V  I P+ +TF ++L +    G +E    +H  
Sbjct: 179 SYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRH 238

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           +   G  TN+ V NAL++ Y K     +A ++F +M+ RN+I+W ++I  +  +G P + 
Sbjct: 239 LASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEA 298

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L  F  +   ++ P   + S AL++CA + +L  G++IH  V++ +L S   +  +++++
Sbjct: 299 LNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASP-QMETSLLSM 354

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YA+CG LD + RVFN M  +D  S NA+I+A+ QHG  K+A+  ++ M+  G I  D  T
Sbjct: 355 YARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEG-IPADGIT 413

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           F +VL ACSH  LV D    F S+V D+G +P  +H  CM+D+LGR+G L +AE ++ + 
Sbjct: 414 FVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETM 473

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
             Q  +  W  L S C  HG+L  G   A  + E    +   YV LSN+YAAA  +++A 
Sbjct: 474 PYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDAR 533

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            +R+ ++  GV      S+I
Sbjct: 534 RVRKEMEERGVTTPVAVSYI 553



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 228/524 (43%), Gaps = 49/524 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D + +++ +AAC  L+    G +LH + +  G +    +   +L +Y     L   KRVF
Sbjct: 9   DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             ++  D+++W++ +SA  + G  + A                               + 
Sbjct: 69  EGMEIKDLFAWSSIISAYARAGRGEMA-------------------------------VV 97

Query: 176 LFREMHKLDVRRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           L+R M    V  +  +FA  L  C   AGL + GR +H  +  S       + ++L+ MY
Sbjct: 98  LYRRMIAEGVEPNVVTFACALGGCASVAGLAD-GRAIHQRILASKVPQDDVLQDSLLNMY 156

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSEL 292
             C  +V+A KVFE  K    +  SY  M+      G   EAL  F  M  V ++ P+  
Sbjct: 157 LKCDEMVEARKVFEGMKAR--NVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAY 214

Query: 293 TFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           TF +++ A         G +VH      GF+    V NA +TMY  CG   EA  +F  +
Sbjct: 215 TFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM 274

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
             ++++SW +MI+ YAQ    + A+  +  M    + P   +F S L   A  G ++   
Sbjct: 275 TARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGR 331

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            IH  V +   + + Q+  +L+S YA+   +  A ++F+ M  R+  + N +I  F  +G
Sbjct: 332 EIHHRV-VEAHLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHG 390

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLG 525
              Q L+ +  +    +  D  T    L +C+  S +   +      V+ + ++  +   
Sbjct: 391 RKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHY 450

Query: 526 NAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE 568
             M+ +  + G L D    V  M  + D ++W  L+S   +HG+
Sbjct: 451 LCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGD 494



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 227/474 (47%), Gaps = 48/474 (10%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +R+G  + A+ L+ ++  +  ++P++ + +  L  CA++   A G  +H   L + +   
Sbjct: 87  ARAGRGEMAVVLYRRM-IAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQD 145

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             + +++L++Y    ++V  ++VF  ++  +V S+T  +SA  + G    A E+F +M  
Sbjct: 146 DVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSK 205

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
            +    NA                              Y+FA++L   +  G LE GR++
Sbjct: 206 VEAIEPNA------------------------------YTFATILGAVEGLGNLEKGRKV 235

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H  +   GF   V V NAL+TMY  CG+ V+A KVF+       + IS+  M+   A  G
Sbjct: 236 HRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR--NVISWTSMIAAYAQHG 293

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
             +EAL  F+ M    + PS ++F S ++AC        G ++H + +++   A   +  
Sbjct: 294 NPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMET 349

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           + ++MY+ CG +D+A  +F R++ +D  S N MI+ + Q    + A+  Y  M+  GI  
Sbjct: 350 SLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPA 409

Query: 388 DEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           D  TF S+L +     +V    +   + V  +G++  ++    ++    ++ R+  A ++
Sbjct: 410 DGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEEL 469

Query: 444 FHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
              M  + + + W TL++G   +G   +G +   ++   EL P E    V LS+
Sbjct: 470 VETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVF--ELAPAETLPYVFLSN 521



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 165/401 (41%), Gaps = 47/401 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G + +AL LF ++     ++P+ Y+ +T L A   L N   G ++H +    G     
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V N ++++Y      V  ++VF  +   +V SWT+ ++A  + G+   A  +F +M   
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM--- 305

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
                                          DV     SF+S L+ C   G L+ GR++H
Sbjct: 306 -------------------------------DVEPSGVSFSSALNACALLGALDEGREIH 334

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
             V ++  +    +  +L++MY  CG++ DA +VF   K    D  S N M+      GR
Sbjct: 335 HRVVEAHLAS-PQMETSLLSMYARCGSLDDARRVFNRMKTR--DAFSCNAMIAAFTQHGR 391

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTSVSN 327
            ++AL  +R M    +    +TFVSV+ AC    L         +  M  G         
Sbjct: 392 KKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYL 451

Query: 328 AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIS---TYAQRNLGRSAILAYLEMQSV 383
             + +    G++ +A  +   +  + D V+W T++S    +   N G  A     E+   
Sbjct: 452 CMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPA 511

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS 424
              P  F   ++ A++   +    +   +   G+ T + VS
Sbjct: 512 ETLPYVF-LSNMYAAAKRFDDARRVRKEMEERGVTTPVAVS 551


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 190/563 (33%), Positives = 293/563 (52%), Gaps = 23/563 (4%)

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVV 240
           L VR D ++ + +L  C     L  GR LH+L  +S  +   + V  AL+ MY  C  +V
Sbjct: 93  LRVRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMV 152

Query: 241 ---DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF-RDMLVASLRPSELTFVS 296
              +A   F E      D +    M+ G        EAL  F R ++     PS +T VS
Sbjct: 153 GSINAYNAFSEP-----DMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVS 207

Query: 297 VMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+SA    +    G   HA  +++ FE    + NA +  Y   G +  A  +F  + EKD
Sbjct: 208 VISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKD 267

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHA 410
           +V+W+ M++ Y Q      A+ AY +M   GI+P+  T  S++ +      IE    +H 
Sbjct: 268 VVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHD 327

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                G    + V+ AL+  Y K    ++A Q+F  MS ++ + W  +I+GF  NG P +
Sbjct: 328 IAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDE 387

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ F  +L     PD  T+   L++C+    +R    +HGY++      K+ +  A++ 
Sbjct: 388 SMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVD 447

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           LY+KCG+L C++RVF   +EKD + W+++IS Y  HG G++AV  F+ M     +KP+  
Sbjct: 448 LYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQ-MMVASSVKPNSL 506

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF +VLSACSH+GLV +G RIF+SM   YG +P   H S M+DLLGRAG L EA +++  
Sbjct: 507 TFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLL-- 564

Query: 651 QHIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
            H   R+D   W AL +AC AH +  +  ++A  LL+ + D    Y LL+NIY     W 
Sbjct: 565 -HGNGRADAHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWS 623

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
            A   R +++  G+ K PGCS +
Sbjct: 624 SAKENRNIIRDRGLNKVPGCSAV 646



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 147/575 (25%), Positives = 275/575 (47%), Gaps = 50/575 (8%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY- 91
           R+  + DAL L   +    +++PD ++LS  L ACA L   A G  LHA A+R+   AY 
Sbjct: 79  RARQWCDALLLIPCL----RVRPDAFTLSLLLKACAMLPALAHGRALHALAIRS-CTAYT 133

Query: 92  -PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              VA  ++ +Y   R +V     ++    PD+   T+ ++   +           ++M 
Sbjct: 134 DAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQ-----------NRMA 182

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQL 210
              L  ++  + G    G+    + L   +      +D      VL+         G+  
Sbjct: 183 AEALEFFSRHVVG---QGFMPSPVTLVSVISAAAQLKD------VLN---------GQAC 224

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H+ V ++ F   + +VNA++  Y   G V  A ++FE       D ++++ M+ G    G
Sbjct: 225 HAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEK--DVVTWSCMVTGYVQSG 282

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSVSN 327
            + EAL  ++ M+ A ++P+ +T VSV+ AC L P +  G +VH  A+K G E   +V+ 
Sbjct: 283 DICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVAT 342

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A + MY  C   +EA  +F R+ +KD V+W  +IS + Q  L   ++  +  M   G  P
Sbjct: 343 ALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFP 402

Query: 388 DEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  T   +LA+   SG +     +H ++ I G    I V+ AL+  Y+K   +  A ++F
Sbjct: 403 DAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVF 462

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
            +   ++++ W+++I+G+ ++G   Q ++ F  ++ S ++P+  T    LS+C+    ++
Sbjct: 463 ESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQ 522

Query: 505 HGKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA- 562
            GK+I   + +   ++      +AM+ L  + G+L  + ++ +     D  +W AL++A 
Sbjct: 523 EGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAAC 582

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
            A H      V   K +    ++ PD A +  +L+
Sbjct: 583 RAHHDTEMSEVVAAKLL----KLDPDHAGYYNLLN 613


>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 713

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 201/672 (29%), Positives = 324/672 (48%), Gaps = 57/672 (8%)

Query: 71  RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
           RN   G  +HA  +R G       AN +++ Y     L     +F+ I   DV SW    
Sbjct: 30  RNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSW---- 85

Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG---YEDIGIGLFREMHKLDVRR 187
                                      N++ITG ++NG        + LFREM   D+  
Sbjct: 86  ---------------------------NSLITGYSQNGGISSSHTVMQLFREMRAQDILP 118

Query: 188 DNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           + Y+ A +    ++ L     GRQ H+LV K      + V  +L+ MY   G        
Sbjct: 119 NAYTLAGIFKA-ESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVY 177

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS---ACL 302
           +     Y  D +   +     +S+  +EE               S+  F +V+S   A +
Sbjct: 178 YGFWLCYKKDVLRRQLK----SSICFLEEK---------EKESDSDYVFTAVLSSLAATV 224

Query: 303 CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
              +G Q+H   +K+G   + ++SNA +TMYS C  ++EAC +F    +++ ++W+ M++
Sbjct: 225 YVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 284

Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVE--MIHAFVFINGIIT 419
            Y+Q      AI  +  M S GI+P E+T  G L A S    +VE   +H+F+   G   
Sbjct: 285 GYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFER 344

Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
           ++  + AL+  YAK   +  A + F  +  R++  W +LI+G++ N    + L  +  + 
Sbjct: 345 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 404

Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
            + + P++ T++  L +C+ +++L  GKQ+HG+ +K+    ++ +G+A+ T+Y KCG L+
Sbjct: 405 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCGSLE 464

Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               VF     KD +SWNA+IS  + +G+G EA+  F+ M   G  +PD  TF  ++SAC
Sbjct: 465 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG-TEPDDVTFVNIISAC 523

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           SH G V+ G   F  M + +G  P  DH +CM+D+L RAG L E +  I S  I      
Sbjct: 524 SHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGLCL 583

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
           W  L SAC  HGN  LG      L+     + S YV L+ IY A G   +   + +L++ 
Sbjct: 584 WRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLMRT 643

Query: 720 TGVIKQPGCSWI 731
            GV K+ GCSWI
Sbjct: 644 NGVSKEVGCSWI 655



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 189/433 (43%), Gaps = 77/433 (17%)

Query: 41  LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
           + LF ++ +   L P+ Y+L+    A ++L++   G Q HA  ++       +V  +++ 
Sbjct: 105 MQLFREMRAQDIL-PNAYTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVG 163

Query: 101 LYKNA-----------------RDLVSVKRVFS-------EIQNPDVYSWTTFLSACTKM 136
           +Y  A                 +D++  +   S       E ++   Y +T  LS+    
Sbjct: 164 MYCKAGLKYLYMVYYGFWLCYKKDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLAAT 223

Query: 137 GHVDYA----------------------------CEVFD---KMPD----RDLPVYNAMI 161
            +V                               CE  +   KM D    R+   ++AM+
Sbjct: 224 VYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMV 283

Query: 162 TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFS 220
           TG ++NG     I LF  M    ++   Y+   VL+ C D   L  G+QLHS + K GF 
Sbjct: 284 TGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFE 343

Query: 221 CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC----DHISYNVMMDGLASVGRVEEAL 276
             +    AL+ MY   G + DA       KG+ C    D   +  ++ G       EEAL
Sbjct: 344 RHLFATTALVDMYAKAGCLADA------RKGFDCLQERDVALWTSLISGYVQNSDNEEAL 397

Query: 277 IRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           I +R M  A + P++ T  SV+ AC       +G QVH   +K GF     + +A  TMY
Sbjct: 398 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 457

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG +++  ++F R   KD+VSWN MIS  +    G  A+  + EM + G  PD+ TF 
Sbjct: 458 TKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFV 517

Query: 394 SLLAS---SGFIE 403
           +++++    GF+E
Sbjct: 518 NIISACSHKGFVE 530



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 35/271 (12%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           S++G   +A+ LF ++ S+  +KP  Y++   L AC+++     G QLH++ L+ G + +
Sbjct: 287 SQNGESLEAIKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLGFERH 345

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
                 ++ +Y  A  L   ++ F  +Q  DV  WT+                       
Sbjct: 346 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS----------------------- 382

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
                   +I+G  +N   +  + L+R M    +  ++ + ASVL  C +   LE G+Q+
Sbjct: 383 --------LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 434

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    K GF   V + +AL TMY  CG++ D   VF        D +S+N M+ GL+  G
Sbjct: 435 HGHTIKHGFGLEVPIGSALSTMYTKCGSLEDGNLVFRRTPNK--DVVSWNAMISGLSHNG 492

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           + +EAL  F +ML     P ++TFV+++SAC
Sbjct: 493 QGDEALELFEEMLAEGTEPDDVTFVNIISAC 523



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 12/163 (7%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++AL L+ ++ ++  + P+  ++++ L AC++L     G Q+H + ++ G      + + 
Sbjct: 394 EEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 452

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PD 151
           + ++Y     L     VF    N DV SW   +S  +  G  D A E+F++M      PD
Sbjct: 453 LSTMYTKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPD 512

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS 191
            D+   N +I+ C+  G+ + G   F  M     LD + D+Y+
Sbjct: 513 -DVTFVN-IISACSHKGFVERGWSYFHMMSDQFGLDPKVDHYA 553



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 6/129 (4%)

Query: 475 FSELLMSELRPDEYTLSV--ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           +     +E+ P  +T ++  AL+  ++  +L  G+ +H  +++    +     N ++  Y
Sbjct: 2   YPSTFQTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFY 61

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG---EGKEAVSCFKAMQDVGRIKPDQ 589
           AKCG L  +  +FN +I KD +SWN+LI+ Y+Q+G        +  F+ M+    I P+ 
Sbjct: 62  AKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMR-AQDILPNA 120

Query: 590 ATFTAVLSA 598
            T   +  A
Sbjct: 121 YTLAGIFKA 129


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 197/624 (31%), Positives = 308/624 (49%), Gaps = 40/624 (6%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
            ++P     T  +S   + GH D A  VFD MP R+   YNAMI+G   N    +   LF
Sbjct: 28  FEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLF 87

Query: 178 REMHKLDVRRDNY---SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
            +M   D+   N     +A    + DA +L       S+  K      V   NA+++ Y 
Sbjct: 88  DKMPHKDLFSWNLMLTGYARNRRLRDARML-----FDSMPEKD-----VVSWNAMLSGYV 137

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G+V +A  VF+       + IS+N ++      GR+EEA   F          S+   
Sbjct: 138 RSGHVDEARDVFDRMPHK--NSISWNGLLAAYVRSGRLEEARRLFES-------KSDWEL 188

Query: 295 VSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-------NAAITMYSSCGKIDEACMIFA 347
           +S    C C   GY V    +    + +  +        N  I+ Y+  G + +A  +F 
Sbjct: 189 IS----CNCLMGGY-VKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE 243

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM 407
               +D+ +W  M+  Y Q  +   A   + EM     +  E ++  ++A     + ++M
Sbjct: 244 ESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP----QKREMSYNVMIAGYAQYKRMDM 299

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
               +F      NI   N +IS Y +N  + QA  +F  M  R+ ++W  +I G+  NG 
Sbjct: 300 GRE-LFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGL 358

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
             + +    E+       +  T   ALS+CA I++L  GKQ+HG V++        +GNA
Sbjct: 359 YEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNA 418

Query: 528 MITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
           ++ +Y KCG +D +  VF  +  KD +SWN +++ YA+HG G++A++ F++M   G +KP
Sbjct: 419 LVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG-VKP 477

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           D+ T   VLSACSH GL D GT  F SM  DYG  P   H +CM+DLLGRAG L+EA+ +
Sbjct: 478 DEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNL 537

Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLW 707
           I +   +  +  W AL  A   HGN+ LG   A ++ + E     +YVLLSN+YAA+G W
Sbjct: 538 IRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRW 597

Query: 708 EEAANIRELLKRTGVIKQPGCSWI 731
            + + +R  +++ GV K PG SW+
Sbjct: 598 VDVSKMRLKMRQIGVQKTPGYSWV 621



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 150/562 (26%), Positives = 249/562 (44%), Gaps = 50/562 (8%)

Query: 22  LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
           +K   +++   R+GH   AL +F  +       P   S+S        LRNA F      
Sbjct: 34  VKCTKAISTHMRNGHCDLALCVFDAM-------PLRNSVSYNAMISGYLRNAKFS----- 81

Query: 82  YALRAGLKAYPHVA----NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
              R      PH      N +L+ Y   R L   + +F  +   DV SW   LS   + G
Sbjct: 82  -LARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSG 140

Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
           HVD A +VFD+MP ++   +N ++     +G  +    LF      ++   N      + 
Sbjct: 141 HVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVK 200

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
                +L   RQL   +       L+S  N +I+ Y   G++  A ++FEE+   V D  
Sbjct: 201 ---RNMLGDARQLFDQIPVRD---LIS-WNTMISGYAQDGDLSQARRLFEESP--VRDVF 251

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKS 317
           ++  M+      G ++EA   F +M     +  E+++ +VM A      GY  + + M  
Sbjct: 252 TWTAMVYAYVQDGMLDEARRVFDEM----PQKREMSY-NVMIA------GYAQYKR-MDM 299

Query: 318 GFEAYTSVS-------NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           G E +  +        N  I+ Y   G + +A  +F  + ++D VSW  +I+ YAQ  L 
Sbjct: 300 GRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLY 359

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNAL 427
             A+   +EM+  G   +  TF   L++   I  +E+   +H  V   G      V NAL
Sbjct: 360 EEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNAL 419

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K   I +AY +F  +  ++I++WNT++ G+  +GF  Q L  F  ++ + ++PDE
Sbjct: 420 VGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDE 479

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVF- 545
            T+   LS+C+       G +    + K+  I+  S   A MI L  + G L+ +  +  
Sbjct: 480 ITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIR 539

Query: 546 NMMIEKDTISWNALISAYAQHG 567
           NM  E D  +W AL+ A   HG
Sbjct: 540 NMPFEPDAATWGALLGASRIHG 561


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 200/707 (28%), Positives = 346/707 (48%), Gaps = 89/707 (12%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R G YQ+AL  F ++   + L PD + L   L AC  L     G  +H            
Sbjct: 90  RKGFYQEALLGFKEMQE-NGLLPDNFVLPNVLKACGGLEWIRIGKVVHG----------- 137

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
                          LVS             Y W        KM       +    MP R
Sbjct: 138 ---------------LVSCG-----------YVW--------KMWGGGGCKKGVCGMPQR 163

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLH 211
           +   +N+MI G  +NG  +  I +F EM +  V     + +S LS   + G L+ G+Q H
Sbjct: 164 NAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGH 223

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           ++    G     ++ ++LI  Y   G + DA  VF  ++    D +++N+++ G   +G 
Sbjct: 224 AIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVF--SRMLEKDVVTWNLLISGYVQIGE 281

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNA 328
           V++AL     M + +LR   +T  ++MSA    R   +G + H   +++  E+   V ++
Sbjct: 282 VDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSS 341

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            + MY+ C KI  A  +F     KD++ WNTM++ +A+      A+  + +MQ   + P+
Sbjct: 342 IVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPN 401

Query: 389 EFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             ++                                N+LI  +  + ++ +A  +F  M 
Sbjct: 402 VISW--------------------------------NSLILGFLNSGQVNEAKDMFLQMQ 429

Query: 449 P----RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
                 N++TW TLI+G   +GF  + +  F  +  + ++P+  ++   L +C  ++SL+
Sbjct: 430 SLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQ 489

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
            G+ +HGY+++++L   + +  +++ +YAKCGD D + RVF+M+ +K+   +NA+IS +A
Sbjct: 490 IGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGFA 549

Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
            HG+  EA++ ++ +++ G +KPD  TFT  L ACSHA +V +G  +F  MV+++   P+
Sbjct: 550 LHGQAVEALALYRCLKEEG-LKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPS 608

Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
            +H  CM+ LL R G LDEA  +I++   +       +L +AC  H  + L   ++  LL
Sbjct: 609 IEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLL 668

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + + D    YV +SN YAAAG W+E   +R+L+K  G+ K PGCSWI
Sbjct: 669 KLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWI 715



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 252/533 (47%), Gaps = 44/533 (8%)

Query: 204 LEFGRQLHSLVTKSG--FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
           L  GRQ+H+ + K G  F+    +   L+  Y  C N   +  +F   +  + +  S+  
Sbjct: 26  LHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR--LKNVFSWAA 83

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSG 318
           ++      G  +EAL+ F++M    L P      +V+ AC      R+G  VH       
Sbjct: 84  VIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVHGLV---- 139

Query: 319 FEAYTSVSNAAITMYSSCGKI------DEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
                           SCG +               + +++ V+WN+MI  Y Q  L   
Sbjct: 140 ----------------SCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEE 183

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
           AI  + EM+  G+ P + T  S L++S   G ++  +  HA   I GI     + ++LI+
Sbjct: 184 AIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLIN 243

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y+K   I+ A  +F  M  ++++TWN LI+G++  G   + L     + +  LR D  T
Sbjct: 244 FYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVT 303

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L+  +S+ A + +L+ GK+ H Y ++NNL S + + ++++ +YAKC  + C+ RVFN  I
Sbjct: 304 LATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSI 363

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
            KD I WN +++A+A+ G   EA++ F  MQ +  + P+  ++ +++    ++G V++  
Sbjct: 364 TKDLILWNTMLAAFAELGHSGEALNLFYQMQ-LESVPPNVISWNSLILGFLNSGQVNEAK 422

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS---A 666
            +F  M    G  P     + ++  L R+G+  EA              N  ++     A
Sbjct: 423 DMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLA 481

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS--NIYAAAGLWEEAANIRELL 717
           C    +L++GR + G L+ R     S+ +  S  ++YA  G  ++A  + +++
Sbjct: 482 CINLASLQIGRALHGYLI-RHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMI 533



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 17/322 (5%)

Query: 282 MLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG--FEAYTSVSNAAITMYSSC 336
           M + +LR     +  ++  C+  R    G Q+HAQ +K G  F     +    +  Y+ C
Sbjct: 1   MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
              + +  +F R++ K++ SW  +I    ++   + A+L + EMQ  G+ PD F   ++L
Sbjct: 61  DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120

Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
            + G +E + +        G + +  VS   +    K        +    M  RN + WN
Sbjct: 121 KACGGLEWIRI--------GKVVHGLVSCGYV---WKMWGGGGCKKGVCGMPQRNAVAWN 169

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
           ++I G++ NG   + ++ F E+    + P + TLS  LS+ A + +L+ GKQ H   +  
Sbjct: 170 SMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVIC 229

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            +    +LG+++I  Y+K G ++ +  VF+ M+EKD ++WN LIS Y Q GE  +A++  
Sbjct: 230 GIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMC 289

Query: 577 KAMQDVGRIKPDQATFTAVLSA 598
             M+ +  ++ D  T   ++SA
Sbjct: 290 HLMR-LENLRFDSVTLATLMSA 310



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/425 (23%), Positives = 185/425 (43%), Gaps = 69/425 (16%)

Query: 21  LLKLNISLANLSRSGHYQ----DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           +L+ ++   NL  SG+ Q    D       +     L+ D  +L+T ++A A++RN   G
Sbjct: 261 MLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLG 320

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            + H Y +R  L++   V ++I+ +Y     +   +RVF+     D+  W T L+A  ++
Sbjct: 321 KEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAEL 380

Query: 137 GHVDYACEVFDKMPDRDLPV----YNAMITGCTENGYEDIGIGLFREMHKLDVR------ 186
           GH   A  +F +M    +P     +N++I G   +G  +    +F +M  L V+      
Sbjct: 381 GHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQSLGVQPNLVTW 440

Query: 187 --------RDNYSFASVLS---VCDAGL-------------------LEFGRQLHSLVTK 216
                   R  + + ++L+   + +AG+                   L+ GR LH  + +
Sbjct: 441 TTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIR 500

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
                 + +  +L+ MY  CG+   A +VF+       +   YN M+ G A  G+  EAL
Sbjct: 501 HSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDK--ELPIYNAMISGFALHGQAVEAL 558

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTS-VSN-------- 327
             +R +    L+P  +TF + + AC         HA  +  G E +   VSN        
Sbjct: 559 ALYRCLKEEGLKPDNITFTNALYAC--------SHAMMVSEGLELFVDMVSNHNINPSIE 610

Query: 328 ---AAITMYSSCGKIDEAC-MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
                +++ S CG +DEA  +I A   + D+    ++++   + N  +  +  YL  Q +
Sbjct: 611 HYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHN--KIELEEYLSNQLL 668

Query: 384 GIRPD 388
            ++PD
Sbjct: 669 KLQPD 673



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 149/338 (44%), Gaps = 55/338 (16%)

Query: 378 LEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGII--TNIQVSNALISAYA 432
           +E++++ I P+   +G LL    +   +     IHA +   G I   N  +   L+  YA
Sbjct: 1   MELKNLRIGPE--VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYA 58

Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
           K +  + +  +F  +  +N+ +W  +I      GF  + L  F E+  + L PD + L  
Sbjct: 59  KCDNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPN 118

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
            L +C  +  +R GK +HG V         S G        K        +    M +++
Sbjct: 119 VLKACGGLEWIRIGKVVHGLV---------SCGYVW-----KMWGGGGCKKGVCGMPQRN 164

Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG---- 608
            ++WN++I  Y Q+G  +EA+  F  M++ G ++P Q T ++ LSA ++ G + DG    
Sbjct: 165 AVAWNSMIVGYVQNGLNEEAIEVFYEMREEG-VEPTQVTLSSFLSASANLGALQDGKQGH 223

Query: 609 -----------TRIFDSMVNDY---GFIP-AEDHLSCMLDL------LGRAGYLD--EAE 645
                      T +  S++N Y   G I  AE   S ML+       L  +GY+   E +
Sbjct: 224 AIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVD 283

Query: 646 RVINSQH------IQARSDNWWALFSACAAHGNLRLGR 677
           + +N  H      ++  S     L SA A   NL+LG+
Sbjct: 284 KALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGK 321


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 194/617 (31%), Positives = 315/617 (51%), Gaps = 27/617 (4%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
           + G V +A   FD M  R++  ++AMI    + G+    + LF  M    V+ +  +F S
Sbjct: 4   RCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAITFVS 63

Query: 195 VLSVCDA-GLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFE--EAK 250
           VL  C + G +  G+ +H  +   G     V + N ++ MY  CG V  A +VFE  EAK
Sbjct: 64  VLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK 123

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---G 307
             V    ++N M+   +   R +EA     +M +  LRP+++T VSV+ AC   +    G
Sbjct: 124 NTV----TWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRG 179

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
             VH      G E+  +V+NA + +Y  CGK+  A      ++ +D +SW T+++ YA+ 
Sbjct: 180 RIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARH 239

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVS 424
             G+ AI     M   G++ D FTF +LL S   I  +   E IH  +  +GI  +  + 
Sbjct: 240 GHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQ 299

Query: 425 NALISAYAKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            AL+  Y K      A + F  M   R++  WN L+  ++L     + L  F+ + +  +
Sbjct: 300 TALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGV 359

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGD 537
            PD  T    L +CA +++L  G+  H  +L+  L  + ++ +A      +I +YAKCG 
Sbjct: 360 APDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGS 419

Query: 538 LDCSLRVF---NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
           L  +   F         D ++W+A+++AY+Q G  +EA+ CF +MQ  G +KPD  +F +
Sbjct: 420 LADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEG-VKPDSVSFVS 478

Query: 595 VLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
            ++ CSH+GLV +    F S+ +D+G  P E H +C++DLL RAG++ EAE ++    + 
Sbjct: 479 AIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLG 538

Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
           A    W  L SAC  +G+L   R +A  L        S Y LL++++  +  W++  N R
Sbjct: 539 AHHSTWMTLLSACRTYGDLERARRVAARLASLRSG--SAYSLLASVFCLSRKWDDVRNAR 596

Query: 715 ELLKRTGVIKQPGCSWI 731
           + L   G I QPGCSWI
Sbjct: 597 QSLVERGFITQPGCSWI 613



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 169/339 (49%), Gaps = 6/339 (1%)

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY+ CG +  A   F  +  +++VSW+ MI+ YAQR     A+  ++ M   G++ +  T
Sbjct: 1   MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGII-TNIQVSNALISAYAKNERIKQAYQIFHNM 447
           F S+L   AS G I + + IH  +  +G++  ++ + N +++ Y K   +  A ++F  M
Sbjct: 61  FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
             +N +TWNT+I     +    +      E+ +  LRP++ TL   + +CA + S+  G+
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
            +H  V    L S  ++ NA++ LY KCG L  +      +  +D ISW  L++AYA+HG
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHG 240

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
            GK A++  K M   G +K D  TF  +L +C     +  G  I D +  + G       
Sbjct: 241 HGKRAIAVIKRMDHEG-VKLDSFTFVNLLESCVAIAALALGEEIHDRLA-ESGIELDPVL 298

Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            + ++D+ G+ G  D A R  +          W AL +A
Sbjct: 299 QTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAA 337



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 219/510 (42%), Gaps = 62/510 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  ++ GH  DAL LFV++     +K +  +  + L ACA+L   A G  +H   +  G
Sbjct: 30  IAAYAQRGHPADALELFVRM-DHEGVKANAITFVSVLDACASLGAIALGKSIHERIVADG 88

Query: 88  LKAYPHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           L     +  NTI+++Y                                K G VD A EVF
Sbjct: 89  LLGDDVILGNTIVNMY-------------------------------GKCGEVDLAREVF 117

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
           ++M  ++   +N MI  C+ +        L  EM    +R +  +  SV+  C     + 
Sbjct: 118 ERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIS 177

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            GR +H +V   G     +V NAL+ +Y  CG +  A    E  +    D IS+  ++  
Sbjct: 178 RGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETR--DKISWTTLLAA 235

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
            A  G  + A+   + M    ++    TFV+++ +C+      +G ++H +  +SG E  
Sbjct: 236 YARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELD 295

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
             +  A + MY  CG  D A   F R+++ +D+  WN +++ Y  R+ G+  +  +  M 
Sbjct: 296 PVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMS 355

Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYA 432
             G+ PD  TF S+L   AS   + +  + H+ +   G+     V++A      +I+ YA
Sbjct: 356 LQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYA 415

Query: 433 KNERIKQAYQIF---HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
           K   +  A   F         +++ W+ ++  +   G   + L+ F  +    ++PD  +
Sbjct: 416 KCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVS 475

Query: 490 LSVALSSC----------ARISSLRHGKQI 509
              A++ C          A  +SLRH   I
Sbjct: 476 FVSAIAGCSHSGLVREAVAFFTSLRHDHGI 505



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 180/400 (45%), Gaps = 46/400 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  SR   Y++A  L  ++     L+P+  +L + + ACA +++ + G  +H    
Sbjct: 129 NTMIAACSRHDRYKEAFALLGEMDLD-GLRPNKITLVSVIDACAWMQSISRGRIVHEIVA 187

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             GL++   VAN +++LY     L + +     I+  D  SWTT L+A  + GH   A  
Sbjct: 188 GEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRA-- 245

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                        I + + M    V+ D+++F ++L  C A   
Sbjct: 246 -----------------------------IAVIKRMDHEGVKLDSFTFVNLLESCVAIAA 276

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G ++H  + +SG      +  AL+ MY  CGN   A + F+  +  V D   +N ++
Sbjct: 277 LALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRD-VRDVTVWNALL 335

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
                  + +E L  F  M +  + P  +TF+S++ AC       +G   H++ ++ G  
Sbjct: 336 AAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLF 395

Query: 321 AYTSVSNA------AITMYSSCGKIDEACMIFA---RLQEKDIVSWNTMISTYAQRNLGR 371
              +V++A       I MY+ CG + +A   FA   R +  D+V+W+ M++ Y+Q  L  
Sbjct: 396 DRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSE 455

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF 411
            A+  +  MQ  G++PD  +F S +A      +V    AF
Sbjct: 456 EALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAF 495


>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
 gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
          Length = 756

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 207/682 (30%), Positives = 338/682 (49%), Gaps = 69/682 (10%)

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +N  L+    +  L + +R+F E+   +V S+   +SA    G +  A  +FD+MP R+ 
Sbjct: 14  SNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPRRNP 73

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSL 213
             +N M+  C+++G  +   GLF  M      R+ YS+  ++S    AG L   R+L  L
Sbjct: 74  VSWNTMMVACSQHGRVEDARGLFDAMPA----RNEYSWTIMVSCYVRAGELTLAREL--L 127

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL------- 266
               G  C  +  N +I+ Y   G   DA  + +E      D +S+N ++ GL       
Sbjct: 128 DRMPGEKC-AACYNTMISGYAKNGRFEDAIALLQEMPAP--DIVSWNSVLGGLIRNEEIS 184

Query: 267 --------------ASVGRVEEALIRFRDMLVASL------RPSELTFVSVMSA-CLCPR 305
                          S   + E  +R  D+ VAS        P+ +++V++++  C   R
Sbjct: 185 RSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYCQAGR 244

Query: 306 VGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
           +G    A+ +         V+ N  ++ Y    +++ A  +F  + EK+ +SW TM+S +
Sbjct: 245 MG---EARELFDRMPERNVVAWNVLLSGYVQFSQVEAAYNLFIEMPEKNSISWTTMVSGF 301

Query: 365 AQR----------------NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---------S 399
            +                 N+G    L +  ++S  I      F  ++           S
Sbjct: 302 VRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKSNLIDDARQLFDGIVVRDAVCWNTMIS 361

Query: 400 GFIEMVEMIHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           G+++   +  A V    +     +S N +I+  A+  +I++A  IF  M  RN ++WN++
Sbjct: 362 GYVQCGMLDEAMVLFQQMPNKDMISWNTMIAGCAQGGQIRKAASIFRKMKRRNTVSWNSI 421

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+GF+ NG  V+ LQHF  +       D  T +  LS+ A +++L+ G+Q H  +++   
Sbjct: 422 ISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATLQIGRQFHSLLVRTGF 481

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
           IS  S GNA+I+ YAKCG +  + +VF+ M+ +D +SWNALI  YA +G G E ++ F+ 
Sbjct: 482 ISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWNALIDGYASNGNGSEVIAVFRE 541

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M+    ++PD+ T   VLSACSHAGL+D+G   F+SM+  Y   P  +H +CM+DLLGRA
Sbjct: 542 ME-ANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRA 600

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G L EA  ++    IQ  +  W AL  AC  H N  +  + A  L E E  K S YVLLS
Sbjct: 601 GRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEKLFELEPCKASNYVLLS 660

Query: 699 NIYAAAGLWEEAANIRELLKRT 720
           NI   AG W++A  +R L+K +
Sbjct: 661 NICVEAGKWDDADKVRVLMKES 682



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 138/350 (39%), Gaps = 72/350 (20%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++   ++G + +AL  F+ +    K   D  + +  L+A ANL     G Q H+  +
Sbjct: 419 NSIISGFVQNGLFVEALQHFMLMRRDAK-SADWCTYACCLSASANLATLQIGRQFHSLLV 477

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  +     N ++S Y     ++  ++VF E+   D+ SW                  
Sbjct: 478 RTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQDIVSWN----------------- 520

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
                         A+I G   NG     I +FREM    VR D  +   VLS C  AGL
Sbjct: 521 --------------ALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGL 566

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           ++ G  LH               N++I +Y               +   V +H  Y  M+
Sbjct: 567 IDEG--LH-------------FFNSMIKLY---------------SLKPVAEH--YTCMV 594

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
           D L   GR+ EA    + M    ++P+   + +++ AC   +  +++   A +  FE   
Sbjct: 595 DLLGRAGRLREAFELVQGM---QIQPNAGVWGALLGACRVHK-NHEIAWLAAEKLFELEP 650

Query: 324 SVSNAAITMYSSC---GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
             ++  + + + C   GK D+A  +   ++E  + S N  IS     N G
Sbjct: 651 CKASNYVLLSNICVEAGKWDDADKVRVLMKESILRSCNIHISNKMLDNSG 700


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 193/603 (32%), Positives = 316/603 (52%), Gaps = 16/603 (2%)

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV---RRDNYSFASVLS 197
           +A ++F++ P + + ++NA++      G     + LF +M+   V   R DNY+ +  L 
Sbjct: 54  HAHKLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALK 113

Query: 198 VCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            C +GL  LE G+ +H  + K   S +  V +ALI +Y  CG + DA KVF E      D
Sbjct: 114 SC-SGLQKLELGKMIHGFLKKKIDSDMF-VGSALIELYSKCGQMNDAVKVFTEYPK--PD 169

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSACLCP---RVGYQVH 311
            + +  ++ G    G  E AL  F  M+V   + P  +T VS  SAC       +G  VH
Sbjct: 170 VVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVH 229

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
               + GF+    ++N+ + +Y   G I  A  +F  +  KDI+SW++M++ YA      
Sbjct: 230 GFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAET 289

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
           +A+  + EM    I  +  T  S L   ASS  +E  + IH      G   +I VS AL+
Sbjct: 290 NALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALM 349

Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
             Y K    + A ++F+ M  +++++W  L +G+   G   + L  F  +L +  RPD  
Sbjct: 350 DMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAI 409

Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
            L   L++ + +  ++    +H +V K+   +   +G ++I LYAKC  +D + +VF  +
Sbjct: 410 ALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGL 469

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              D ++W+++I+AY  HG+G+EA+     M +   +KP+  TF ++LSACSHAGL+++G
Sbjct: 470 RHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 529

Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
            ++F  MVN+Y  +P  +H   M+DLLGR G LD+A  +IN+  +QA    W AL  AC 
Sbjct: 530 IKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACR 589

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
            H N+++G + A  L   + +    Y LLSNIY     W +AA +R L+K   + K  G 
Sbjct: 590 IHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQ 649

Query: 729 SWI 731
           S +
Sbjct: 650 SMV 652



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 255/546 (46%), Gaps = 49/546 (8%)

Query: 35  GHYQDALHLFVQIHSS--HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           G + + L LF Q+++    + +PD Y++S  L +C+ L+    G  +H + L+  + +  
Sbjct: 81  GKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDM 139

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V + ++ LY     +    +VF+E   PDV  WT+                        
Sbjct: 140 FVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTS------------------------ 175

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFASVLSVCDAGLLEF--GRQ 209
                  +ITG  +NG  ++ +  F  M  L+ V  D  +  S  S C A L +F  GR 
Sbjct: 176 -------IITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASAC-AQLSDFNLGRS 227

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H  V + GF   + + N+++ +Y   G++  A  +F E      D IS++ M+   A  
Sbjct: 228 VHGFVKRRGFDTKLCLANSILNLYGKTGSIRIAANLFREMP--YKDIISWSSMVACYADN 285

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVS 326
           G    AL  F +M+   +  + +T +S + AC        G Q+H  A+  GFE   +VS
Sbjct: 286 GAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVS 345

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A + MY  C   + A  +F R+ +KD+VSW  + S YA+  +   ++  +  M S G R
Sbjct: 346 TALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTR 405

Query: 387 PDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           PD      +LA+S   G ++    +HAFV  +G   N  +  +LI  YAK   I  A ++
Sbjct: 406 PDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNANKV 465

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISS 502
           F  +   +++TW+++I  +  +G   + L+   ++   S+++P++ T    LS+C+    
Sbjct: 466 FKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGL 525

Query: 503 LRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALI 560
           +  G K  H  V +  L+  +     M+ L  + G+LD +L +  NM ++     W AL+
Sbjct: 526 IEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALL 585

Query: 561 SAYAQH 566
            A   H
Sbjct: 586 GACRIH 591



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 133/518 (25%), Positives = 237/518 (45%), Gaps = 26/518 (5%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS-YNVMMDGLA 267
           QLHS   K G +    VV  L  +Y    ++  A K+FEE     C  +  +N ++    
Sbjct: 22  QLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETP---CKTVYLWNALLRSYF 78

Query: 268 SVGRVEEALIRFRDM---LVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEA 321
             G+  E L  F  M    V   RP   T    + +C   +   +G  +H   +K   ++
Sbjct: 79  LEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHG-FLKKKIDS 137

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
              V +A I +YS CG++++A  +F    + D+V W ++I+ Y Q      A+  +  M 
Sbjct: 138 DMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMV 197

Query: 382 SV-GIRPDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNE 435
            +  + PD  T  S  A+S   ++ +      +H FV   G  T + ++N++++ Y K  
Sbjct: 198 VLEQVSPDPVTLVS--AASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTG 255

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I+ A  +F  M  ++II+W++++  +  NG     L  F+E++   +  +  T+  AL 
Sbjct: 256 SIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALR 315

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
           +CA  S+L  GKQIH   +       +++  A++ +Y KC   + ++ +FN M +KD +S
Sbjct: 316 ACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKKDVVS 375

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  L S YA+ G   +++  F  M   G  +PD      +L+A S  G+V        + 
Sbjct: 376 WAVLFSGYAEIGMAHKSLGVFCNMLSNG-TRPDAIALVKILAASSELGIVQQAL-CLHAF 433

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS-QHIQARSDNWWALFSACAAHGNLR 674
           V   GF   E   + +++L  +   +D A +V    +H    +  W ++ +A   HG   
Sbjct: 434 VTKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVT--WSSIIAAYGFHGQGE 491

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAA--AGLWEEA 710
               ++  +      KP+    +S + A   AGL EE 
Sbjct: 492 EALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEG 529



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 196/424 (46%), Gaps = 42/424 (9%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  + AL  F ++    ++ PD  +L +  +ACA L +   G  +H +  R G     
Sbjct: 182 QNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKL 241

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            +AN+IL+LY     +     +F E+   D+ SW++ + AC       YA          
Sbjct: 242 CLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMV-AC-------YA---------- 283

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
                        +NG E   + LF EM    +  +  +  S L  C  +  LE G+Q+H
Sbjct: 284 -------------DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIH 330

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
            L    GF   ++V  AL+ MY  C +  +A ++F        D +S+ V+  G A +G 
Sbjct: 331 KLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNRMPKK--DVVSWAVLFSGYAEIGM 388

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNA 328
             ++L  F +ML    RP  +  V +++A     +  Q   +HA   KSGF+    +  +
Sbjct: 389 AHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGAS 448

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRP 387
            I +Y+ C  ID A  +F  L+  D+V+W+++I+ Y     G  A+ L++       ++P
Sbjct: 449 LIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKP 508

Query: 388 DEFTFGSLLAS---SGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           ++ TF S+L++   +G IE  ++M H  V    ++ NI+    ++    +   + +A  +
Sbjct: 509 NDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDM 568

Query: 444 FHNM 447
            +NM
Sbjct: 569 INNM 572



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 124/238 (52%), Gaps = 5/238 (2%)

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
           +  +H+     G+  +  V   L   YA+   +  A+++F     + +  WN L+  + L
Sbjct: 20  ITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFL 79

Query: 465 NGFPVQGLQHFSEL---LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            G  V+ L  F ++    ++E RPD YT+S+AL SC+ +  L  GK IHG+ LK  + S 
Sbjct: 80  EGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF-LKKKIDSD 138

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           M +G+A+I LY+KCG ++ +++VF    + D + W ++I+ Y Q+G  + A++ F  M  
Sbjct: 139 MFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPELALAFFSRMVV 198

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           + ++ PD  T  +  SAC+     + G R     V   GF       + +L+L G+ G
Sbjct: 199 LEQVSPDPVTLVSAASACAQLSDFNLG-RSVHGFVKRRGFDTKLCLANSILNLYGKTG 255



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 21/236 (8%)

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           + C++IS      Q+H   LK  L     +   +  LYA+   L  + ++F     K   
Sbjct: 13  TCCSKISI----TQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVY 68

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQ--DVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
            WNAL+ +Y   G+  E +S F  M    V   +PD  T +  L +CS    ++ G  I 
Sbjct: 69  LWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMI- 127

Query: 613 DSMVNDYGFIPAE---DHL--SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
                 +GF+  +   D    S +++L  + G +++A +V  +++ +     W ++ +  
Sbjct: 128 ------HGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVF-TEYPKPDVVLWTSIITGY 180

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL--WEEAANIRELLKRTG 721
             +G+  L       ++  EQ  P    L+S   A A L  +    ++   +KR G
Sbjct: 181 EQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRG 236


>gi|224084249|ref|XP_002307242.1| predicted protein [Populus trichocarpa]
 gi|222856691|gb|EEE94238.1| predicted protein [Populus trichocarpa]
          Length = 561

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 190/555 (34%), Positives = 307/555 (55%), Gaps = 23/555 (4%)

Query: 191 SFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
           +F+S L  C   LLE    G  +H    K GF   V V  +L+ MY NCG++  A KVF 
Sbjct: 12  TFSSSLQAC--CLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLESANKVF- 68

Query: 248 EAKGYVC--DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--- 302
              G V   D + +N M+ G     ++EE ++ F  M+   + P+E T+  +++AC    
Sbjct: 69  ---GCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLG 125

Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
            C R G  +HAQ +     A   + NA + MY SCG  +    +F +++  D+VSWN+MI
Sbjct: 126 DC-RWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSWNSMI 184

Query: 362 STYAQRNLGRSAILAYLEMQSVGI-RPDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGI 417
           S YA+   G  A+  +L++  V + +PDE+TF +++ A+S F      + +HA V   G 
Sbjct: 185 SGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGS 244

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
             ++ +   L+S Y KN  I+ A Q+F+ +  ++++ W  +I G    G     ++ FS 
Sbjct: 245 ERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSM 304

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           +     + D + LS ALS+CA +++L  G+ IH   +K    +++S+  +++ +YAK GD
Sbjct: 305 MCHEGYKIDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGD 364

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L  +  +F+ +   D   WN+++  Y+QHG  +EA+  F  +   G+ +PDQ TF ++LS
Sbjct: 365 LHAARSIFSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQ-RPDQVTFLSLLS 423

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER-VINSQHIQAR 656
           ACSH+GLV++G ++  S +     IP   H SCM+ LL RAG LDEAE  +I S + +  
Sbjct: 424 ACSHSGLVEEG-KLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDH 482

Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
            + W  L S+C    NL++G   A  +L+ E +  + ++LLSN+YAAAG WE  A +R  
Sbjct: 483 LELWRTLLSSCVNKRNLKIGVRAAEEILQLEPEDSATHILLSNLYAAAGRWEAVAEMRRK 542

Query: 717 LKRTGVIKQPGCSWI 731
           +    + K PG SWI
Sbjct: 543 ISGLMIEKDPGLSWI 557



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/558 (25%), Positives = 256/558 (45%), Gaps = 46/558 (8%)

Query: 50  SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           +  L P+  + S++L AC  L +   G+ +H  +++ G      V  ++L +Y N  DL 
Sbjct: 3   TQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGDLE 62

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
           S  +VF  +   D   W                               N+MI G  +N  
Sbjct: 63  SANKVFGCVVQKDAVLW-------------------------------NSMIFGNLKNEK 91

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNA 228
            + G+ LF +M +  +    ++++ +L+ C   G   +G+ +H+ V        + + NA
Sbjct: 92  LEEGVLLFGKMVRHGIVPTEFTYSMILNACGKLGDCRWGQVIHAQVIVLNVLADLPLQNA 151

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL- 287
           L+ MY +CG+      VF + +    D +S+N M+ G A  G   +A+  F  ++   L 
Sbjct: 152 LLDMYCSCGDTETGFNVFNKIENP--DLVSWNSMISGYAENGEGADAMNLFLQLVGVFLP 209

Query: 288 RPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           +P E TF +V+SA         G  +HAQ +K G E    +    ++MY   G I+ A  
Sbjct: 210 KPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQ 269

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
           +F  ++ KD+V W  MI  +++   G SAI  +  M   G + D F     L++   +  
Sbjct: 270 VFNMIEGKDVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYKIDSFALSGALSACADLAT 329

Query: 405 V---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           +   EMIH      G    I V  +L+  YAKN  +  A  IF  +S  ++  WN+++ G
Sbjct: 330 LNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNPDLKCWNSMLGG 389

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  +G   + +  F+++L++  RPD+ T    LS+C+    +  GK +  ++ KN++I  
Sbjct: 390 YSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHSGLVEEGKLLWSHIKKNDVIPG 449

Query: 522 MSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAM 579
               + M++L ++ G LD +   +      KD +  W  L+S+       K  V   +A 
Sbjct: 450 PKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLSSCVNKRNLKIGV---RAA 506

Query: 580 QDVGRIKPDQATFTAVLS 597
           +++ +++P+ +    +LS
Sbjct: 507 EEILQLEPEDSATHILLS 524



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 212/456 (46%), Gaps = 45/456 (9%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H + P  ++ S  L AC  L +  +G  +HA  +   + A   + N +L +Y +  D  +
Sbjct: 105 HGIVPTEFTYSMILNACGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTET 164

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
              VF++I+NPD+ SW                               N+MI+G  ENG  
Sbjct: 165 GFNVFNKIENPDLVSW-------------------------------NSMISGYAENGEG 193

Query: 171 DIGIGLFREMHKLDV-RRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNA 228
              + LF ++  + + + D Y+FA+V+S   A     +G+ LH+ V K G    V +   
Sbjct: 194 ADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLHAQVLKVGSERSVFIGTT 253

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L++MY   G++  A +VF   +G   D + +  M+ G + +G  E A+  F  M     +
Sbjct: 254 LLSMYLKNGDIESAEQVFNMIEGK--DVVLWTEMIMGHSRLGGGESAIKLFSMMCHEGYK 311

Query: 289 PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
                    +SAC        G  +H Q +K G +A  SV  + + MY+  G +  A  I
Sbjct: 312 IDSFALSGALSACADLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSI 371

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI 402
           F+++   D+  WN+M+  Y+Q  +   A++ + ++   G RPD+ TF SLL++   SG +
Sbjct: 372 FSQVSNPDLKCWNSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSACSHSGLV 431

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF--HNMSPRNIITWNTLIN 460
           E  +++ + +  N +I   +  + ++S  ++   + +A ++      S  ++  W TL++
Sbjct: 432 EEGKLLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLS 491

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             +       G++   E+L  +L P++    + LS+
Sbjct: 492 SCVNKRNLKIGVRAAEEIL--QLEPEDSATHILLSN 525



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 127/224 (56%), Gaps = 3/224 (1%)

Query: 380 MQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           M + G+ P+  TF S L +   +E   M  +IH     +G   ++ V  +L+  Y+    
Sbjct: 1   MGTQGLTPNGSTFSSSLQACCLLEDWFMGSLIHGQSVKHGFFNDVFVQTSLLGMYSNCGD 60

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           ++ A ++F  +  ++ + WN++I G L N    +G+  F +++   + P E+T S+ L++
Sbjct: 61  LESANKVFGCVVQKDAVLWNSMIFGNLKNEKLEEGVLLFGKMVRHGIVPTEFTYSMILNA 120

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
           C ++   R G+ IH  V+  N+++ + L NA++ +Y  CGD +    VFN +   D +SW
Sbjct: 121 CGKLGDCRWGQVIHAQVIVLNVLADLPLQNALLDMYCSCGDTETGFNVFNKIENPDLVSW 180

Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           N++IS YA++GEG +A++ F  +  V   KPD+ TF AV+SA S
Sbjct: 181 NSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATS 224



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 167/364 (45%), Gaps = 56/364 (15%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  + +G   DA++LF+Q+      KPD Y+ +  ++A +      +G  LH
Sbjct: 177 LVSWNSMISGYAENGEGADAMNLFLQLVGVFLPKPDEYTFAAVISATSAFSATCYGKPLH 236

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A  L+ G +    +  T+LS+Y    D+ S ++VF+ I+  DV  WT  +   +++G  +
Sbjct: 237 AQVLKVGSERSVFIGTTLLSMYLKNGDIESAEQVFNMIEGKDVVLWTEMIMGHSRLGGGE 296

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
            A ++F  M              C E GY                + D+++ +  LS C 
Sbjct: 297 SAIKLFSMM--------------CHE-GY----------------KIDSFALSGALSACA 325

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D   L  G  +H+   K G    +SV  +L+ MY   G++  A  +F +      D   +
Sbjct: 326 DLATLNQGEMIHTQTVKRGCDAEISVCGSLVHMYAKNGDLHAARSIFSQVSNP--DLKCW 383

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           N M+ G +  G  EEA+I F  +LV   RP ++TF+S++SAC         H+  ++ G 
Sbjct: 384 NSMLGGYSQHGMAEEAMIIFAKILVNGQRPDQVTFLSLLSAC--------SHSGLVEEGK 435

Query: 320 EAYTSVS-----------NAAITMYSSCGKIDEA-CMIFARLQEKDIVS-WNTMISTYA- 365
             ++ +            +  +++ S  G +DEA  +I      KD +  W T++S+   
Sbjct: 436 LLWSHIKKNDVIPGPKHYSCMVSLLSRAGLLDEAEELIIKSTYSKDHLELWRTLLSSCVN 495

Query: 366 QRNL 369
           +RNL
Sbjct: 496 KRNL 499


>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 955

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 213/714 (29%), Positives = 357/714 (50%), Gaps = 58/714 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLK--AY 91
           +G  + +L  F +++ S + + D  SLS  ++AC++L   AFG  +H   ++ G K  ++
Sbjct: 279 NGDLEKSLCYFRRMNFSEE-RADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSF 337

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             VAN+++SLY                            S C     VD A  VF +M  
Sbjct: 338 VSVANSLISLY----------------------------SQCEA---VDVAETVFREMAY 366

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLSVC-DAGLLEFGRQ 209
           +D+  +NAM+ G   N        L  EM      + D  +  ++L +C +  L   GR 
Sbjct: 367 KDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRT 426

Query: 210 LHSL-VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           +H   + +      + + N LI MY  C NVV+  ++   +   + D +S+N M+ G + 
Sbjct: 427 IHGYAIRRHMVPDHLPLRNGLIDMYSKC-NVVEKAELLFHSTAQI-DLVSWNAMISGYSQ 484

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
               E+A   F+++L      S  T  +++S+C        G  VH   +KSGF  +T +
Sbjct: 485 NKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLL 544

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEK----DIVSWNTMISTYAQRNLGRSAILAYLEM- 380
            N+ + MY + G +      F+ LQE     DI SWNT+I    + +  + A+  ++ M 
Sbjct: 545 VNSLMQMYINSGDLTSG---FSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMR 601

Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q      D  T  ++L++   IE++     +H+    +   ++ +V N+LI+ Y +   I
Sbjct: 602 QGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDI 661

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A ++F   S  N+ TWN +I+    N    + L+ F  L   + +P+E+T+   LS+C
Sbjct: 662 NSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSAC 718

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            RI  L HGKQ+HGY  +        +  A++ LY+ CG LD +++VF    +K   +WN
Sbjct: 719 TRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHS-QKSESAWN 777

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++I+AY  HG G++A+  F  M D+G IK  ++TF ++LSACSH+GLV+ G + ++ M+ 
Sbjct: 778 SMIAAYGNHGNGEKAIELFHEMCDLG-IKVTKSTFVSLLSACSHSGLVNQGLQYYECMLE 836

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            YG  P  +H   ++++L R+G +DEA +        A S  W  L S C  HG L LG+
Sbjct: 837 KYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGK 896

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +A  L E E      Y+ L+N+Y AAG W++A ++R+ +   G+ K  G S I
Sbjct: 897 KVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRKCAGYSLI 950



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 170/651 (26%), Positives = 305/651 (46%), Gaps = 56/651 (8%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y+ A+  F Q     + + D  +L   ++  ++L+N   G  +H  ++++G+     + N
Sbjct: 179 YRTAVEFF-QKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCN 237

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
            ++++Y                            + C  +   D  C +F++M  +D+  
Sbjct: 238 ALINMY----------------------------AKCGDVNSSDSEC-LFEEMEYKDVVS 268

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
           +N+++ GC  NG  +  +  FR M+  + R D+ S +  +S C + G L FG  +H    
Sbjct: 269 WNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGI 328

Query: 216 KSGF--SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           K G+  +  VSV N+LI++Y  C  V  A  VF E      D +S+N MM+G AS   + 
Sbjct: 329 KLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK--DIVSWNAMMEGYASNENIH 386

Query: 274 EALIRFRDM-LVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGF-EAYTSVSNA 328
           EA     +M      +P  +T  +++  C   +  R G  +H  A++      +  + N 
Sbjct: 387 EAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNG 446

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MYS C  +++A ++F    + D+VSWN MIS Y+Q      A   + E+   G    
Sbjct: 447 LIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCS 506

Query: 389 EFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             T  ++L+   S+  +   + +H +   +G + +  + N+L+  Y  +  +   + I  
Sbjct: 507 SSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQ 566

Query: 446 -NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE---LRPDEYTLSVALSSCARIS 501
            N S  +I +WNT+I G +      + L+ F  +LM +      D  TL   LS+ A I 
Sbjct: 567 ENSSIADIASWNTIIVGCVRGDQFQEALETF--MLMRQGPSFNYDSITLVNVLSAVANIE 624

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L  GK +H   LK+   S   + N++IT+Y +C D++ + +VF      +  +WN +IS
Sbjct: 625 LLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMIS 684

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A + + E +EA+  F+ +Q     KP++ T  +VLSAC+  G++  G ++       YG+
Sbjct: 685 ALSHNKESREALELFRHLQ----FKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFR-YGY 739

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
                  + ++DL    G LD A +V   +H Q     W ++ +A   HGN
Sbjct: 740 QQNSFISAALVDLYSTCGRLDNAVKVF--RHSQKSESAWNSMIAAYGNHGN 788



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 261/551 (47%), Gaps = 55/551 (9%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           +H  AL+ G  AY   + ++ +LY  A D  S + +F  I N                  
Sbjct: 119 VHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHN------------------ 160

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                        RD+  +NA+I+   EN      +  F++M K   R D+ +   V+S 
Sbjct: 161 -------------RDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVST 207

Query: 199 CDAGLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNV--VDACKVFEEAKGYVC 254
             + L  FG  R +H +  KSG    +S+ NALI MY  CG+V   D+  +FEE +    
Sbjct: 208 L-SHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYK-- 264

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVH 311
           D +S+N +M G    G +E++L  FR M  +  R   ++    +SAC        G  +H
Sbjct: 265 DVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIH 324

Query: 312 AQAMKSGFE--AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
            Q +K G++  ++ SV+N+ I++YS C  +D A  +F  +  KDIVSWN M+  YA    
Sbjct: 325 GQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNEN 384

Query: 370 GRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITN-IQVS 424
              A    +EMQ+ G  +PD  T  ++L     + +      IH +     ++ + + + 
Sbjct: 385 IHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLR 444

Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           N LI  Y+K   +++A  +FH+ +  ++++WN +I+G+  N +  +    F ELL     
Sbjct: 445 NGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQN 504

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
               T+   LSSC   +SL  GK +H + LK+  ++   L N+++ +Y   GDL      
Sbjct: 505 CSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSG--- 561

Query: 545 FNMMIEKDTI----SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           F+++ E  +I    SWN +I    +  + +EA+  F  M+       D  T   VLSA +
Sbjct: 562 FSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVA 621

Query: 601 HAGLVDDGTRI 611
           +  L++ G  +
Sbjct: 622 NIELLNQGKSL 632



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 184/353 (52%), Gaps = 17/353 (4%)

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           VH  A+K+G  AY   S +  T+YS  G    + ++F  +  +D+++WN +IS   +   
Sbjct: 119 VHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKC 178

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNA 426
            R+A+  + +M     R D  T   ++++   ++      +IH     +G++ +I + NA
Sbjct: 179 YRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNA 238

Query: 427 LISAYAKNERIKQAYQ--IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
           LI+ YAK   +  +    +F  M  +++++WN+++ G L NG   + L +F  +  SE R
Sbjct: 239 LINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEER 298

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVL----KNNLISKMSLGNAMITLYAKCGDLDC 540
            D  +LS A+S+C+ +  L  G+ IHG  +    K+N  S +S+ N++I+LY++C  +D 
Sbjct: 299 ADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDN--SFVSVANSLISLYSQCEAVDV 356

Query: 541 SLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
           +  VF  M  KD +SWNA++  YA +    EA      MQ  G  +PD  T T +L  C+
Sbjct: 357 AETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCA 416

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLSC---MLDLLGRAGYLDEAERVINS 650
              L  +G  I    +  +  +P  DHL     ++D+  +   +++AE + +S
Sbjct: 417 ELMLYREGRTIHGYAIRRH-MVP--DHLPLRNGLIDMYSKCNVVEKAELLFHS 466



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 219/483 (45%), Gaps = 44/483 (9%)

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
           A  +FDKMP R+  V              ++   L  +  KL + + N   A+V+     
Sbjct: 78  AINLFDKMPQRNFHV-------------REVHFDLVVDCIKLSLEKPNIFTATVV----- 119

Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
                    H    K+G    +    +L T+Y   G+   +  +FE       D I++N 
Sbjct: 120 ---------HCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNR--DVIAWNA 168

Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAMKSG 318
           ++           A+  F+ M+    R    T    VS +S       G  +H  ++KSG
Sbjct: 169 IISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSG 228

Query: 319 FEAYTSVSNAAITMYSSCGKI---DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
                S+ NA I MY+ CG +   D  C+ F  ++ KD+VSWN+++           ++ 
Sbjct: 229 MLVDISLCNALINMYAKCGDVNSSDSECL-FEEMEYKDVVSWNSIMRGCLYNGDLEKSLC 287

Query: 376 AYLEMQSVGIRPDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITN--IQVSNALISA 430
            +  M     R D  +     S  +S G +   E IH      G   N  + V+N+LIS 
Sbjct: 288 YFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISL 347

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYT 489
           Y++ E +  A  +F  M+ ++I++WN ++ G+  N    +      E+  +   +PD  T
Sbjct: 348 YSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVT 407

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLI-SKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
           L+  L  CA +   R G+ IHGY ++ +++   + L N +I +Y+KC  ++ +  +F+  
Sbjct: 408 LTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHST 467

Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
            + D +SWNA+IS Y+Q+   ++A + FK +   G+     +T  A+LS+C+ A  ++ G
Sbjct: 468 AQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQ-NCSSSTVFAILSSCNSANSLNFG 526

Query: 609 TRI 611
             +
Sbjct: 527 KSV 529



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 134/275 (48%), Gaps = 15/275 (5%)

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           ++H      G +  +  S +L + Y+K      +  +F ++  R++I WN +I+  L N 
Sbjct: 118 VVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENK 177

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
                ++ F +++  + R D  TL + +S+ + + +   G+ IH   +K+ ++  +SL N
Sbjct: 178 CYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCN 237

Query: 527 AMITLYAKCGDLDCSLR--VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           A+I +YAKCGD++ S    +F  M  KD +SWN+++     +G+ ++++  F+ M +   
Sbjct: 238 ALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRM-NFSE 296

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGY 640
            + D  + +  +SACS  G +  G  I    +     D  F+   + L   + L  +   
Sbjct: 297 ERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSL---ISLYSQCEA 353

Query: 641 LDEAERVINSQHIQARSD--NWWALFSACAAHGNL 673
           +D AE V       A  D  +W A+    A++ N+
Sbjct: 354 VDVAETVFRE---MAYKDIVSWNAMMEGYASNENI 385



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 161/381 (42%), Gaps = 48/381 (12%)

Query: 15  NTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA 74
           N+S   +   N  +    R   +Q+AL  F+ +        D  +L   L+A AN+    
Sbjct: 568 NSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLN 627

Query: 75  FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            G  LH+ AL++   +   V N+++++Y   RD+ S ++VF      ++ +W        
Sbjct: 628 QGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTW-------- 679

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                                  N MI+  + N      + LFR    L  + + ++  S
Sbjct: 680 -----------------------NCMISALSHNKESREALELFRH---LQFKPNEFTIVS 713

Query: 195 VLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VLS C   G+L  G+Q+H    + G+     +  AL+ +Y  CG + +A KVF  ++   
Sbjct: 714 VLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRHSQK-- 771

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQV 310
               ++N M+    + G  E+A+  F +M    ++ ++ TFVS++SAC    +   G Q 
Sbjct: 772 -SESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQY 830

Query: 311 HAQAM-KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS-WNTMIST---YA 365
           +   + K G +         + M +  G+IDEA      LQ       W  ++S    + 
Sbjct: 831 YECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLLSVCNYHG 890

Query: 366 QRNLGRSAILAYLEM--QSVG 384
           +  LG+       EM  Q+VG
Sbjct: 891 ELELGKKVAEKLFEMEPQNVG 911


>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/534 (32%), Positives = 276/534 (51%), Gaps = 11/534 (2%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+++HS +  +GF      + +LI MY  C  +  A  +F +    + +  ++N ++ G 
Sbjct: 56  GKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEI-NVFAFNAIISGF 114

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
            + G  EE    ++ M    + P + TF   + ACL      ++H    K G E    + 
Sbjct: 115 ITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEIKKIHGLLFKFGLELDVFIG 174

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +A +  Y   G ++ A + F  L  +D+V WN M++ YAQ       +  +  M    + 
Sbjct: 175 SALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVV 234

Query: 387 PDEFTFG---SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           P  FT     S+ A  G +    +IH F    G  + + VSN+LI  Y K + I+ A +I
Sbjct: 235 PSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEI 294

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M  ++I +WN++++     G     L+    +L + ++PD  T++  L +C+ +++L
Sbjct: 295 FEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAAL 354

Query: 504 RHGKQIHGYVLKNNL------ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
            HG++IHGY++ + L      I  + L NA+I +YAKCG +  +  VF  M  KD  SWN
Sbjct: 355 MHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWN 414

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +I  Y  HG G EA+  F  M +V ++KPD+ TF  VLSACSHAG V  G      M +
Sbjct: 415 IMIMGYGMHGYGNEALEMFSRMCEV-QLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKS 473

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
            Y   P  +H +C++D+LGRAG LDEA  +  +  I+A    W AL +AC  H +  L  
Sbjct: 474 KYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAE 533

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + A  + E E +    YVL+SN+Y A G +EE   +R  +++  V K PGCSWI
Sbjct: 534 VAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWI 587



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 181/380 (47%), Gaps = 29/380 (7%)

Query: 103 KNARDLVSVKRV----FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           K   D++ +K++    F      DV+  +  ++   K G +++A   F+++P RD+ ++N
Sbjct: 147 KACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWN 206

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKS 217
           AM+ G  + G  ++ +  FR M+   V    ++   VLSV    G L  GR +H    K 
Sbjct: 207 AMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKM 266

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           G+   V+V N+LI MY  C  + DA ++FE  +    D  S+N ++      G  +  L 
Sbjct: 267 GYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREK--DIFSWNSIVSVHEQCGDHDGTLR 324

Query: 278 RFRDMLVASLRPSELTFVSVMSAC--LCPRV-GYQVHAQAMKSGFEAYTS------VSNA 328
               ML A ++P  +T  +V+ AC  L   + G ++H   + SG            + NA
Sbjct: 325 LLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNA 384

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            I MY+ CG + +A ++F R+  KD+ SWN MI  Y     G  A+  +  M  V ++PD
Sbjct: 385 VIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPD 444

Query: 389 EFTFGSLLAS---SGFIE-----MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           E TF  +L++   +GF+      +V+M   +     +   I+    +I    +  ++ +A
Sbjct: 445 EVTFVGVLSACSHAGFVSQGRNFLVQMKSKY----DVAPTIEHYTCVIDMLGRAGQLDEA 500

Query: 441 YQIFHNMS-PRNIITWNTLI 459
           Y++   M    N + W  L+
Sbjct: 501 YELALTMPIEANPVVWRALL 520



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 55/374 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   ++ G ++  L  F ++ +   + P  ++++  L+  A + +   G  +H +A+
Sbjct: 206 NAMVNGYAQIGQFEMVLETFRRM-NDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAM 264

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G  +   V+N+++ +Y   + +     +F  ++  D++SW + +S   + G  D    
Sbjct: 265 KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLR 324

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--AG 202
           + D+M                      +G G         ++ D  +  +VL  C   A 
Sbjct: 325 LLDRM----------------------LGAG---------IQPDLVTVTTVLPACSHLAA 353

Query: 203 LLEFGRQLHSLVTKSGFSC------LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           L+  GR++H  +  SG          V + NA+I MY  CG++ DA  VFE       D 
Sbjct: 354 LMH-GREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK--DV 410

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ--- 313
            S+N+M+ G    G   EAL  F  M    L+P E+TFV V+SA  C   G+    +   
Sbjct: 411 ASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA--CSHAGFVSQGRNFL 468

Query: 314 -AMKSGFEAYTSVSN--AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNL 369
             MKS ++   ++ +    I M    G++DEA  +   +  E + V W  ++   A   L
Sbjct: 469 VQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL---AACRL 525

Query: 370 GRSAILAYLEMQSV 383
            + A+LA +  Q V
Sbjct: 526 HKHAVLAEVAAQRV 539



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 34/281 (12%)

Query: 476 SELLMSELRPDEYTLSVA-LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
           S  + S  +P   T  +A L + A   +L  GK+IH Y+L N  ++      ++I +Y+K
Sbjct: 25  STAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSK 84

Query: 535 CGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
           C  ++ +L +F +   E +  ++NA+IS +  +G  +E    ++ M++ G I PD+ TF 
Sbjct: 85  CNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVI-PDKFTFP 143

Query: 594 AVLSAC--------SHAGLVDDGTR----IFDSMVNDY-----------GF--IPAEDHL 628
             + AC         H  L   G      I  ++VN Y            F  +P  D +
Sbjct: 144 CAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVV 203

Query: 629 --SCMLDLLGRAGYLD---EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             + M++   + G  +   E  R +N + +         + S  A  G+L  GRII G  
Sbjct: 204 LWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFA 263

Query: 684 LEREQDKP-SVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
           ++   D   +V   L ++Y      E+A  I E+++   + 
Sbjct: 264 MKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIF 304


>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g08210-like [Glycine max]
          Length = 686

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 200/716 (27%), Positives = 338/716 (47%), Gaps = 75/716 (10%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D+  +   L  C   +       LH+  ++ GL  +  + N+I+S+Y             
Sbjct: 2   DLNQIQLALRCCGRFQAIKHAKSLHSLIIKLGLSNHIFLLNSIISVY------------- 48

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              K    D A  +FD+MP R++  +  M++  T +G     + 
Sbjct: 49  ------------------AKCSRFDDARTLFDEMPHRNIVSFTTMVSAFTNSGRPHEALT 90

Query: 176 LFREM-HKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           L+  M     V+ + + +++VL  C   G +E G  +H  V+++       ++NAL+ MY
Sbjct: 91  LYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVLMNALLDMY 150

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM----------L 283
             CG+++DA +VF E      +  S+N ++ G A  G + +A   F  M          +
Sbjct: 151 VKCGSLMDAKRVFHEIPCK--NSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDLVSWNSI 208

Query: 284 VASL----RPSELTFVSVM-------SACLCP------------RVGYQVHAQAMKSGFE 320
           +A L     P  L F+S+M        A   P             +G Q+H   +KSG E
Sbjct: 209 IAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCIIKSGLE 268

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQE--KDIVSWNTMISTYAQRNLGRSAILAYL 378
                 ++ I MYS+C  +DEA  IF +     + +  WN+M+S Y        A+    
Sbjct: 269 CSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWRALGMIA 328

Query: 379 EMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
            M   G + D +TF   L    + +   +   +H  +   G   +  V + LI  YAK  
Sbjct: 329 CMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILIDLYAKQG 388

Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
            I  A ++F  +  ++++ W++LI G    G        F +++  +L  D + LS+ L 
Sbjct: 389 NINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFVLSIVLK 448

Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
             + ++SL+ GKQIH + LK    S+  +  A+  +YAKCG+++ +L +F+ + E DT+S
Sbjct: 449 VSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALALFDCLYEIDTMS 508

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +I   AQ+G   +A+S    M + G  KP++ T   VL+AC HAGLV++   IF S+
Sbjct: 509 WTGIIVGCAQNGRADKAISILHKMIESGT-KPNKITILGVLTACRHAGLVEEAWTIFKSI 567

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
             ++G  P  +H +CM+D+  +AG   EA  +IN    +     W +L  AC  + N  L
Sbjct: 568 ETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGTYKNRHL 627

Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             I+A  LL    +  SVY++LSN+YA+ G+W+  + +RE +++ G IK  G SWI
Sbjct: 628 ANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSKVREAVRKVG-IKGAGKSWI 682



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 139/541 (25%), Positives = 245/541 (45%), Gaps = 10/541 (1%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
            + SG   +AL L+  +  S  ++P+ +  S  L AC  + +   G  +H +   A L+ 
Sbjct: 79  FTNSGRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEF 138

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              + N +L +Y     L+  KRVF EI   +  SW T +    K G +  A  +FD+MP
Sbjct: 139 DTVLMNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMP 198

Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQ 209
           + DL  +N++I G  +N      +     MH   ++ D ++F   L  C   G L  GRQ
Sbjct: 199 EPDLVSWNSIIAGLADNASPH-ALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQ 257

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           +H  + KSG  C    +++LI MY NC  + +A K+F++          +N M+ G  + 
Sbjct: 258 IHCCIIKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVAN 317

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVS 326
           G    AL     M  +  +    TF   +  C+     R+  QVH   +  G+E    V 
Sbjct: 318 GDWWRALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVG 377

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           +  I +Y+  G I+ A  +F RL  KD+V+W+++I   A+  LG      +++M  + + 
Sbjct: 378 SILIDLYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLE 437

Query: 387 PDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D F    +L  S  +  ++    IH+F    G  +   ++ AL   YAK   I+ A  +
Sbjct: 438 IDHFVLSIVLKVSSSLASLQSGKQIHSFCLKKGYESERVITTALTDMYAKCGEIEDALAL 497

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  +   + ++W  +I G   NG   + +    +++ S  +P++ T+   L++C     +
Sbjct: 498 FDCLYEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGLV 557

Query: 504 RHGKQIHGYV-LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALIS 561
                I   +  ++ L       N M+ ++AK G    +  + N M  + D   W +L+ 
Sbjct: 558 EEAWTIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLD 617

Query: 562 A 562
           A
Sbjct: 618 A 618


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/530 (32%), Positives = 276/530 (52%), Gaps = 8/530 (1%)

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
           Q+HS +  +    L  + N L+ +Y  CG+V     +F  A     + +S+  ++  L  
Sbjct: 48  QIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTR 107

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSV 325
             R  +AL  F  M  + + P+  TF +V+SAC        G Q+H+   K GF A   V
Sbjct: 108 FKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFV 167

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            +A + MY+ C  +  A  +F  +  +++VSWNTMI  + Q  L   AI  +  +    +
Sbjct: 168 VSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENL 227

Query: 386 RP-DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
              DE +F S+    A++G +E  + +H      G+   + ++N+L   Y K        
Sbjct: 228 TALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVA 287

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
           ++F N   R+++TWN +I  ++ N         F  +      PDE + S  L SCA ++
Sbjct: 288 KLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLA 347

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
           +L  G  IH  ++++  +  + + +++IT+YAKCG L  + ++F    +++ + W A+I+
Sbjct: 348 ALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIA 407

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           A  QHG     V  F+ M   G IKPD  TF +VLSACSH G V++G   F+SM+  +G 
Sbjct: 408 ACQQHGHANWVVELFEQMLREG-IKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGI 466

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
            P  +H +C++DLL RAG LD A+R I    I+  +  W AL SAC  H NL +G+ +A 
Sbjct: 467 YPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVAL 526

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            L + E D P  YVLL NI    G+  EA  +R  ++  GV K+PGCSWI
Sbjct: 527 KLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWI 576



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 152/553 (27%), Positives = 255/553 (46%), Gaps = 59/553 (10%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANL-RNAAFGNQLHAYALRAGLKAYPHVANTI 98
            LH  +    SH  +       T+L +  N  R +    Q+H+  +   L + P + N +
Sbjct: 9   PLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNL 68

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPV 156
           L+LY                                K G VD    +F   PD  +++  
Sbjct: 69  LNLY-------------------------------AKCGSVDQTLLLFSSAPDDSKNVVS 97

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
           + ++IT  T        +  F  M +  V  ++Y+F++VLS C D      G Q+HSLV 
Sbjct: 98  WTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVW 157

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K GF   V VV+AL+ MY  C +++ A KVFEE    V + +S+N M+ G       ++A
Sbjct: 158 KHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMP--VRNLVSWNTMIVGFLQNKLYDQA 215

Query: 276 LIRFRDMLVASLRP-SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAIT 331
           +  F+ +L+ +L    E++F SV SAC        G QVH  A+K G      ++N+   
Sbjct: 216 IFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSD 275

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY  CG  ++   +F+    +D+V+WN MI  Y   +    A  ++  M+  G  PDE +
Sbjct: 276 MYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEAS 335

Query: 392 FGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
           + S+L S   +  +    +IH  +  +G + N++V+++LI+ YAK   +  A+QIF    
Sbjct: 336 YSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETE 395

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            RN++ W  +I     +G     ++ F ++L   ++PD  T    LS+C+       G+ 
Sbjct: 396 DRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHT-----GRV 450

Query: 509 IHGYVLKNNLISKMSLGNA------MITLYAKCGDLDCSLRVFNMM-IEKDTISWNALIS 561
             G+   N++I    +         ++ L ++ G+LD + R   +M I+ D   W AL+S
Sbjct: 451 EEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLS 510

Query: 562 AYAQHGE---GKE 571
           A   H     GKE
Sbjct: 511 ACRNHSNLIMGKE 523



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 180/396 (45%), Gaps = 41/396 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +  L+R      AL  F  +  S  + P+ Y+ S  L+AC +   +  G Q+H+   + G
Sbjct: 102 ITQLTRFKRPFKALTFFNHMRRS-GVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHG 160

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
             A   V + ++ +Y    D++  ++VF E                              
Sbjct: 161 FLAEVFVVSALVDMYAKCCDMLMAEKVFEE------------------------------ 190

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFASVLSVC-DAGLLE 205
            MP R+L  +N MI G  +N   D  I  F+ +   ++   D  SF+SV S C +AG LE
Sbjct: 191 -MPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLE 249

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
           FG+Q+H +  K G   LV + N+L  MY  CG   D  K+F        D +++N+M+  
Sbjct: 250 FGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGAR--DVVTWNIMIMA 307

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAY 322
                  E+A   F  M      P E ++ SV+ +C      YQ   +H Q ++SGF   
Sbjct: 308 YVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKN 367

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
             V+++ ITMY+ CG + +A  IF   +++++V W  +I+   Q       +  + +M  
Sbjct: 368 LRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLR 427

Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
            GI+PD  TF S+L++      VE    F + N +I
Sbjct: 428 EGIKPDYITFVSVLSACSHTGRVE--EGFFYFNSMI 461



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 159/380 (41%), Gaps = 53/380 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +    ++  Y  A+  F  +   +    D  S S+  +ACAN  N  FG Q+H
Sbjct: 196 LVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVH 255

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
             AL+ G+    ++ N++  +Y        V ++FS     DV +W   + A        
Sbjct: 256 GVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAY------- 308

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                          VYN        + YED     F  M +     D  S++SVL  C 
Sbjct: 309 ---------------VYN--------HNYED-ACNSFWMMRRKGSIPDEASYSSVLHSCA 344

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--KGYVCDHI 257
           +   L  G  +H+ + +SGF   + V ++LITMY  CG++VDA ++FEE   +  VC   
Sbjct: 345 NLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVC--- 401

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-CPRV--GY-----Q 309
            +  ++      G     +  F  ML   ++P  +TFVSV+SAC    RV  G+      
Sbjct: 402 -WTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSM 460

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRN 368
           +    +  G E Y  +    + + S  G++D A      +  K D   W  ++S  A RN
Sbjct: 461 IKVHGIYPGHEHYACI----VDLLSRAGELDRAKRFIELMPIKPDASVWGALLS--ACRN 514

Query: 369 LGRSAILAYLEMQSVGIRPD 388
                +   + ++   + PD
Sbjct: 515 HSNLIMGKEVALKLFDLEPD 534



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 124/266 (46%), Gaps = 56/266 (21%)

Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-- 550
           +L +C+R S  +H  QIH  ++   L+S   L N ++ LYAKCG +D +L +F+   +  
Sbjct: 35  SLLNCSRTS--KHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDS 92

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K+ +SW +LI+   +     +A++ F  M+  G + P+  TF+AVLSAC+       G +
Sbjct: 93  KNVVSWTSLITQLTRFKRPFKALTFFNHMRRSG-VYPNHYTFSAVLSACTDTTASVHGEQ 151

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW--------- 661
           +  S+V  +GF+     +S ++D+  +   +  AE+V   + +  R+   W         
Sbjct: 152 MH-SLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVF--EEMPVRNLVSWNTMIVGFLQ 208

Query: 662 ----------------------------ALFSACAAHGNLRLGRIIAGLLLEREQDKPSV 693
                                       ++FSACA  GNL  G+ + G+ L     K  V
Sbjct: 209 NKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVAL-----KLGV 263

Query: 694 YVL------LSNIYAAAGLWEEAANI 713
           + L      LS++Y   GL+ + A +
Sbjct: 264 WNLVYINNSLSDMYGKCGLFNDVAKL 289



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 5/174 (2%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
           SNT    ++  NI +     + +Y+DA + F  +     + PD  S S+ L +CANL   
Sbjct: 291 SNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSI-PDEASYSSVLHSCANLAAL 349

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
             G  +H   +R+G      VA++++++Y     LV   ++F E ++ +V  WT  ++AC
Sbjct: 350 YQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAAC 409

Query: 134 TKMGHVDYACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKL 183
            + GH ++  E+F++M       D   + ++++ C+  G  + G   F  M K+
Sbjct: 410 QQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKV 463


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/513 (33%), Positives = 272/513 (53%), Gaps = 11/513 (2%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
            AL+  Y   G V DA + F+E +    D  ++N M+ GL    R  EA+  F  M++  
Sbjct: 108 GALVHAYLRFGRVRDAYRAFDEMRHR--DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEG 165

Query: 287 LRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           +    +T  SV+  C+      +   +H  A+K G +    V NA I +Y   G ++E  
Sbjct: 166 VAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVR 225

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL---LASSG 400
            +F  +  +D+V+WN++IS + Q     SA+  +  M+  G+ PD  T  SL   +A  G
Sbjct: 226 KVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG 285

Query: 401 FIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
            I     +H ++   G  + +I   NA++  YAK  +I+ A ++F +M  R+ ++WNTLI
Sbjct: 286 DICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLI 345

Query: 460 NGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
            G++ NG   + +  +  +   E L+P + T    L + + + +L+ G ++H   +K  L
Sbjct: 346 TGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGL 405

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
              + +G  +I LYAKCG LD ++ +F     + T  WNA+IS    HG G +A+S F  
Sbjct: 406 NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           MQ  G I PD  TF ++L+ACSHAGLVD G   F+ M   YG  P   H +CM+D+ GRA
Sbjct: 466 MQQEG-ISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRA 524

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G LD+A   I +  I+  S  W AL  AC  HGN+ +G++ +  L E +      YVL+S
Sbjct: 525 GQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMS 584

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N+YA  G W+    +R L++R  + K PG S I
Sbjct: 585 NMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 217/457 (47%), Gaps = 13/457 (2%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D ++    + A  + G V  A   FD+M  RD+P +NAM++G   N      +GLF  M 
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162

Query: 182 KLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
              V  D  + +SVL +C   G       +H    K G    + V NA+I +Y   G + 
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLE 222

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           +  KVF+       D +++N ++ G    G+V  A+  F  M  + + P  LT +S+ SA
Sbjct: 223 EVRKVFDGMSSR--DLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASA 280

Query: 301 -CLCPRV--GYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEKDIVS 356
              C  +  G  VH   ++ G++    ++ NA + MY+   KI+ A  +F  +  +D VS
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340

Query: 357 WNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASS---GFIEMVEMIHAFV 412
           WNT+I+ Y Q  L   AI  Y  MQ   G++P + TF S+L +    G ++    +HA  
Sbjct: 341 WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G+  ++ V   +I  YAK  ++ +A  +F     R+   WN +I+G  ++G   + L
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITL 531
             FS++    + PD  T    L++C+    +  G+     +     I  ++   A M+ +
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520

Query: 532 YAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHG 567
           + + G LD +   + NM I+ D+  W AL+ A   HG
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 218/506 (43%), Gaps = 48/506 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+ L R+    +A+ LF ++     +  D  ++S+ L  C  L + A    +H YA+
Sbjct: 139 NAMLSGLCRNARAAEAVGLFGRM-VMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAV 197

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL     V N ++ +Y     L  V++VF  + + D+ +W + +S   + G V  A E
Sbjct: 198 KHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE 257

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           +F  M  RD  V   ++T                            S AS ++ C  G +
Sbjct: 258 MFCGM--RDSGVSPDVLT--------------------------LLSLASAIAQC--GDI 287

Query: 205 EFGRQLHSLVTKSGFSCL-VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
             GR +H  + + G+    +   NA++ MY     +  A ++F+     V D +S+N ++
Sbjct: 288 CGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMP--VRDAVSWNTLI 345

Query: 264 DGLASVGRVEEALIRFRDMLV-ASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGF 319
            G    G   EA+  +  M     L+P + TFVSV+ A       + G ++HA ++K+G 
Sbjct: 346 TGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGL 405

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
                V    I +Y+ CGK+DEA ++F +   +    WN +IS       G  A+  + +
Sbjct: 406 NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI----NGIITNIQVSNALISAYAKNE 435
           MQ  GI PD  TF SLLA+     +V+    F  +     GI    +    ++  + +  
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAG 525

Query: 436 RIKQAYQIFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
           ++  A+    NM   P + I W  L+    ++G    G      L   EL P      V 
Sbjct: 526 QLDDAFDFIRNMPIKPDSAI-WGALLGACRIHGNVEMGKVASQNLF--ELDPKNVGYYVL 582

Query: 494 LSSC-ARISSLRHGKQIHGYVLKNNL 518
           +S+  A++       ++   V + NL
Sbjct: 583 MSNMYAKVGKWDGVDEVRSLVRRQNL 608



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 57/341 (16%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S   L+  N  ++   + G    A+ +F  +  S  + PD+ +L +  +A A   +   G
Sbjct: 232 SSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDS-GVSPDVLTLLSLASAIAQCGDICGG 290

Query: 77  NQLHAYALRAGLKAYPHVA-NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
             +H Y +R G      +A N I+ +Y     + + +R+F  +   D  SW T       
Sbjct: 291 RSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNT------- 343

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSFAS 194
                                   +ITG  +NG     I ++  M K + ++    +F S
Sbjct: 344 ------------------------LITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVS 379

Query: 195 VLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
           VL      G L+ G ++H+L  K+G +  V V   +I +Y  CG + +A  +FE+     
Sbjct: 380 VLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRS 439

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
                +N ++ G+   G   +AL  F  M    + P  +TFVS+++AC         HA 
Sbjct: 440 TG--PWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC--------SHAG 489

Query: 314 AMKSGFEAYTSVSNA------------AITMYSSCGKIDEA 342
            +  G   +  +  A             + M+   G++D+A
Sbjct: 490 LVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDA 530


>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
 gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
 gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 794

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 190/650 (29%), Positives = 344/650 (52%), Gaps = 20/650 (3%)

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V+ T+L   +    LV      +  ++P  Y+    +S   + G ++ A +VFDKMP R+
Sbjct: 105 VSITVLKRARQIHALVLTAGAGAATESP--YANNNLISMYVRCGSLEQARKVFDKMPHRN 162

Query: 154 LPVYNAMITGCTEN-GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQ 209
           +  YNA+ +  + N  +      L   M    V+ ++ +F S++ VC   +LE    G  
Sbjct: 163 VVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC--AVLEDVLMGSS 220

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
           L+S + K G+S  V V  +++ MY +CG++  A ++F+       D +++N M+ G    
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR--DAVAWNTMIVGSLKN 278

Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
            ++E+ L+ FR+ML++ + P++ T+  V++ C       +G  +HA+ + S   A   + 
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI- 385
           NA + MY SCG + EA  +F R+   ++VSWN++IS  ++   G  A+L Y  +  +   
Sbjct: 339 NALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTP 398

Query: 386 RPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
           RPDE+TF + ++++   E     +++H  V   G   ++ V   L+S Y KN   + A +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F  M  R+++ W  +I G    G     +Q F E+   + R D ++LS  + +C+ ++ 
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           LR G+  H   ++      MS+  A++ +Y K G  + +  +F++    D   WN+++ A
Sbjct: 519 LRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGA 578

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y+QHG  ++A+S F+ + + G   PD  T+ ++L+ACSH G    G  +++ M  + G  
Sbjct: 579 YSQHGMVEKALSFFEQILENG-FMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIK 636

Query: 623 PAEDHLSCMLDLLGRAGYLDEA-ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
               H SCM++L+ +AG +DEA E +  S     +++ W  L SAC    NL++G   A 
Sbjct: 637 AGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAE 696

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +L+ + +  + ++LLSN+YA  G WE+ A +R  ++     K PG SWI
Sbjct: 697 QILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWI 746



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 146/569 (25%), Positives = 277/569 (48%), Gaps = 29/569 (5%)

Query: 124 YSWTTFLSACTKMGHVDYACEVFDKMPDRDL-------PVYNAMITGCTENGYEDIGIGL 176
           Y+    +S   +   ++ A +VFDKMP R++        V+  +  G + +  + I +G 
Sbjct: 23  YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHS-QIIKLGS 81

Query: 177 FREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVS---VVNALITM 232
           F+ +  + +     S   +   C    +L+  RQ+H+LV  +G           N LI+M
Sbjct: 82  FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA-SVGRVEEALIRFRDMLVASLRPSE 291
           Y  CG++  A KVF++      + +SYN +    + +      A      M    ++P+ 
Sbjct: 142 YVRCGSLEQARKVFDKMPHR--NVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199

Query: 292 LTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
            TF S++  C       +G  +++Q +K G+     V  + + MYSSCG ++ A  IF  
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           +  +D V+WNTMI    + +     ++ +  M   G+ P +FT+  +L   +  G   + 
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
           ++IHA + ++  + ++ + NAL+  Y     +++A+ +F  +   N+++WN++I+G   N
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379

Query: 466 GFPVQGLQHFSELL-MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           GF  Q +  +  LL MS  RPDEYT S A+S+ A      HGK +HG V K      + +
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFV 439

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           G  ++++Y K  + + + +VF++M E+D + W  +I  +++ G  + AV  F  M    +
Sbjct: 440 GTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYR-EK 498

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
            + D  + ++V+ ACS   ++  G  +F  +    GF         ++D+ G+ G  + A
Sbjct: 499 NRSDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA 557

Query: 645 ERVINSQHIQARSD--NWWALFSACAAHG 671
           E + +   + +  D   W ++  A + HG
Sbjct: 558 ETIFS---LASNPDLKCWNSMLGAYSQHG 583



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/520 (23%), Positives = 237/520 (45%), Gaps = 43/520 (8%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           +KP+  + ++ +  CA L +   G+ L++  ++ G      V  ++L +Y +  DL S +
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
           R+F  + N D  +W                               N MI G  +N   + 
Sbjct: 255 RIFDCVNNRDAVAW-------------------------------NTMIVGSLKNDKIED 283

Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
           G+  FR M    V    ++++ VL+ C   G    G+ +H+ +  S     + + NAL+ 
Sbjct: 284 GLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLD 343

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPS 290
           MY +CG++ +A  VF   + +  + +S+N ++ G +  G  E+A++ +R +L +++ RP 
Sbjct: 344 MYCSCGDMREAFYVF--GRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401

Query: 291 ELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           E TF + +SA   P     G  +H Q  K G+E    V    ++MY    + + A  +F 
Sbjct: 402 EYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD 461

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV-- 405
            ++E+D+V W  MI  +++      A+  ++EM     R D F+  S++ +   + M+  
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521

Query: 406 -EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
            E+ H      G    + V  AL+  Y KN + + A  IF   S  ++  WN+++  +  
Sbjct: 522 GEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQ 581

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           +G   + L  F ++L +   PD  T    L++C+   S   GK +   + +  + +    
Sbjct: 582 HGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKH 641

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTIS--WNALISA 562
            + M+ L +K G +D +L +       +  +  W  L+SA
Sbjct: 642 YSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSA 681



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 39/366 (10%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           +D L  F  +  S  + P  ++ S  L  C+ L + + G  +HA  + +   A   + N 
Sbjct: 282 EDGLMFFRNMLMS-GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNA 340

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
           +L +Y +  D+     VF  I NP++ SW + +S                          
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS-------------------------- 374

Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDV-RRDNYSFASVLS-VCDAGLLEFGRQLHSLVT 215
                GC+ENG+ +  + ++R + ++   R D Y+F++ +S   +      G+ LH  VT
Sbjct: 375 -----GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVT 429

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K G+   V V   L++MYF       A KVF+  K    D + +  M+ G + +G  E A
Sbjct: 430 KLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER--DVVLWTEMIVGHSRLGNSELA 487

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           +  F +M     R    +  SV+ AC      R G   H  A+++GF+   SV  A + M
Sbjct: 488 VQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDM 547

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y   GK + A  IF+     D+  WN+M+  Y+Q  +   A+  + ++   G  PD  T+
Sbjct: 548 YGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTY 607

Query: 393 GSLLAS 398
            SLLA+
Sbjct: 608 LSLLAA 613



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 167/380 (43%), Gaps = 51/380 (13%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G  + A+ ++ ++      +PD Y+ S  ++A A       G  LH
Sbjct: 366 LVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
               + G +    V  T+LS+Y   R+  S ++VF  ++  DV  WT             
Sbjct: 426 GQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTE------------ 473

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                              MI G +  G  ++ +  F EM++   R D +S +SV+  C 
Sbjct: 474 -------------------MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACS 514

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
           D  +L  G   H L  ++GF C++SV  AL+ MY   G    A  +F  A     D   +
Sbjct: 515 DMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN--PDLKCW 572

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC------LCPRVGY-QVHA 312
           N M+   +  G VE+AL  F  +L     P  +T++S+++AC      L  +  + Q+  
Sbjct: 573 NSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKE 632

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS--WNTMISTYAQ-RNL 369
           Q +K+GF+ Y+ + N    + S  G +DEA  +  +    +  +  W T++S     RNL
Sbjct: 633 QGIKAGFKHYSCMVN----LVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNL 688

Query: 370 GRSAILAYLEMQSVGIRPDE 389
               I  Y   Q + + P++
Sbjct: 689 ---QIGLYAAEQILKLDPED 705


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 203/676 (30%), Positives = 335/676 (49%), Gaps = 53/676 (7%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           N +++ Y    D+   +++F  + + DV SW T L+       ++ A  +F++MP+R+  
Sbjct: 130 NAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGV 189

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLH 211
            +  MI+G            +FR M    +  +  +  SVLS        G+LE    +H
Sbjct: 190 SWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILE---SIH 246

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLASVG 270
            LV K+GF   V V  A++  Y    N++D A K FE       +  +++ ++  L+  G
Sbjct: 247 VLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAAR--NEYTWSTIIAALSQAG 304

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAA 329
           R+++A   ++   + S+ PS  + ++ ++     R G    A+ +         VS NA 
Sbjct: 305 RIDDAFAVYQRDPLKSV-PSRTSMLTGLA-----RYGRIDDAKILFDQIHEPNVVSWNAM 358

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           IT Y     +DEA  +F R+  ++ +SW  MI+ YA+      A+++   +   G+ P  
Sbjct: 359 ITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSL 418

Query: 390 FTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAK------------- 433
            +  S   +   IE +E    +H+     G   N  V NALI+ Y K             
Sbjct: 419 SSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDR 478

Query: 434 ------------------NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
                             N    +A  +F+NM   ++++W T+I+         + ++ F
Sbjct: 479 MTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIF 538

Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
             +L     P+   L++ L     + + + G+QIH   +K  + S + + NA++++Y KC
Sbjct: 539 RSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKC 598

Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
              D SL+VF+ M E+D  +WN +I+ YAQHG G+EA+  ++ M   G + P++ TF  +
Sbjct: 599 SSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAG-VLPNEVTFVGL 656

Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQA 655
           L ACSH+GLVD+G + F SM +DYG  P  +H +CM+DLLGRAG +  AE  I    I+ 
Sbjct: 657 LHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEP 716

Query: 656 RSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRE 715
            S  W AL  AC  H N+ +GR  A  L   E      YV+LSNIY++ G+W+E A +R+
Sbjct: 717 DSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRK 776

Query: 716 LLKRTGVIKQPGCSWI 731
           L+K  GV K PGCSW+
Sbjct: 777 LMKERGVNKDPGCSWM 792



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/561 (26%), Positives = 246/561 (43%), Gaps = 65/561 (11%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           ++P   + +  +    ++G +  A EVFD MP RD+  +N+MI     NG  D G  L  
Sbjct: 29  RSPGTSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLAD 88

Query: 179 EMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCG 237
            +   ++R          ++  +G    GR   +     G     +V  NA++T Y   G
Sbjct: 89  AISGGNLRTG--------TILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNG 140

Query: 238 NVVDACKVF------------------------EEAKGYV-----CDHISYNVMMDGLAS 268
           ++  A K+F                        EEA+         + +S+ VM+ G   
Sbjct: 141 DITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVL 200

Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSV 325
           + +   A   FR ML   + P +   VSV+SA      P +   +H    K+GFE    V
Sbjct: 201 IEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVV 260

Query: 326 SNAAITMYSS-CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE--MQS 382
             A +  Y+     +D A   F  +  ++  +W+T+I+  +Q      A   Y    ++S
Sbjct: 261 GTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS 320

Query: 383 VGIRPDEFTFGSLLASSGFIE----MVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
           V   P   +  + LA  G I+    + + IH          N+   NA+I+ Y +NE + 
Sbjct: 321 V---PSRTSMLTGLARYGRIDDAKILFDQIHE--------PNVVSWNAMITGYMQNEMVD 369

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           +A  +F+ M  RN I+W  +I G+  NG   Q L     L    + P   +L+ +  +C+
Sbjct: 370 EAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACS 429

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            I +L  GKQ+H   +K        + NA+ITLY K   +    ++F+ M  KDT+S+N+
Sbjct: 430 NIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNS 489

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
            +SA  Q+    EA   F  M       PD  ++T ++SAC+ A   ++   IF SM+++
Sbjct: 490 FMSALVQNNLFDEARDVFNNMP-----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHE 544

Query: 619 YGFIPAEDHLSCMLDLLGRAG 639
              +P    L+ +L L G  G
Sbjct: 545 RE-LPNPPILTILLGLSGNLG 564



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 212/445 (47%), Gaps = 47/445 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHK--LKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           +A  +R+G  + AL   V + + H+  + P + SL+++  AC+N+     G Q+H+ A++
Sbjct: 390 IAGYARNGRSEQAL---VSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVK 446

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
           AG +   +V N +++LY   R + SV+++F  +   D  S+ +F+SA  +    D A +V
Sbjct: 447 AGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDV 506

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSVCDA--G 202
           F+ MP  D+  +  +I+ C +    +  + +FR M H+ ++   N    ++L       G
Sbjct: 507 FNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL--PNPPILTILLGLSGNLG 564

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             + G+Q+H++  K G    + V NAL++MYF C +  D+ KVF+  +    D  ++N +
Sbjct: 565 APQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEER--DIFTWNTI 621

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
           + G A  G   EA+  ++ M+ A + P+E+TFV ++ AC         H+  +  G + +
Sbjct: 622 ITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHAC--------SHSGLVDEGHQFF 673

Query: 323 TSVSN------------AAITMYSSCGKIDEA-CMIFARLQEKDIVSWNTMIST---YAQ 366
            S+S+              + +    G +  A   I+    E D V W+ ++     +  
Sbjct: 674 KSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKN 733

Query: 367 RNLGRSAI--LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITN---- 420
             +GR A   L  +E  + G   +     ++ +S G  + V  +   +   G+  +    
Sbjct: 734 VEIGRRAAEKLFSIEPSNAG---NYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCS 790

Query: 421 -IQVSNALISAYAKNERIKQAYQIF 444
            +Q+ N + S    +E  +Q   I+
Sbjct: 791 WMQIKNKMHSFVTGDEEHEQIQNIY 815



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 164/385 (42%), Gaps = 56/385 (14%)

Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL---GRSAILAYLE 379
           TS  +A I      G++ EA  +F  +  +DI++WN+MI  Y    +   GRS   A   
Sbjct: 33  TSAQSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADA--- 89

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNERIK 438
                I       G++L S G+     +  A    +G+ + N    NA+++ Y +N  I 
Sbjct: 90  -----ISGGNLRTGTILLS-GYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDIT 143

Query: 439 QAYQIFHNMSPRNIITWNTLINGF-----------LLNGFP----------VQGL----Q 473
            A ++F  M  R++ +WNT++ G+           L    P          + G     Q
Sbjct: 144 LARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQ 203

Query: 474 H------FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA 527
           H      F  +L   + P++  L   LS+   +      + IH  V K      + +G A
Sbjct: 204 HGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTA 263

Query: 528 MITLYAK-CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           ++  Y K    LD +++ F  M  ++  +W+ +I+A +Q G   +A + ++  +D  +  
Sbjct: 264 ILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQ--RDPLKSV 321

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           P +   T++L+  +  G +DD   +FD +       P     + M+    +   +DEAE 
Sbjct: 322 PSR---TSMLTGLARYGRIDDAKILFDQIHE-----PNVVSWNAMITGYMQNEMVDEAED 373

Query: 647 VINSQHIQARSDNWWALFSACAAHG 671
           + N    +  + +W  + +  A +G
Sbjct: 374 LFNRMPFR-NTISWAGMIAGYARNG 397


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 178/520 (34%), Positives = 276/520 (53%), Gaps = 44/520 (8%)

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVH 311
           + + +N+M  G A       AL  +  M+   L P+  TF  ++ +C   +    G Q+H
Sbjct: 39  NQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIH 98

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR----------------------- 348
              +K GF+    V  + I+MY+  G++++A  +F R                       
Sbjct: 99  GHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIE 158

Query: 349 --------LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---A 397
                   +  KD+VSWN MIS YA+    + A+  + EM    ++PDE T  +++   A
Sbjct: 159 SAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACA 218

Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
            SG IE+   +H+++  +G  +N+++ NALI  Y+K   ++ A ++   +S +++I+WNT
Sbjct: 219 QSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNT 278

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV---L 514
           LI G+       + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+   L
Sbjct: 279 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 338

Query: 515 KNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEA 572
           K  +++  S L  ++I +YAKCGD+D + +V +      ++S WNA+I  +A HG    A
Sbjct: 339 KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAA 398

Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
              F  M+  G I+PD  TF  +LSACSH+G++D G  IF SM  DY   P  +H  CM+
Sbjct: 399 FDIFSRMRKNG-IEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMI 457

Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
           DLLG +G   EAE +IN+  ++     W +L  AC  HGNL LG   A  L++ E + P 
Sbjct: 458 DLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPG 517

Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ-PGCSWI 731
            YVLLSNIYA AG W E   IR LL   G+ K+ PGCS I
Sbjct: 518 SYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSI 557



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 261/546 (47%), Gaps = 55/546 (10%)

Query: 124 YSWTTFLSACTKMGHVD---YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           Y+ +  L  C    H D   YA  VF+ +P+ +  ++N M  G   +      + L+  M
Sbjct: 7   YAXSQLLEFCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVM 66

Query: 181 HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
             L +  + ++F  +L  C  +   + G+Q+H  V K GF   + V  +LI+MY   G +
Sbjct: 67  ISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRL 126

Query: 240 VDACKVFEE-----------------AKGY------------VCDHISYNVMMDGLASVG 270
            DA KVF+                  ++GY            + D +S+N M+ G A  G
Sbjct: 127 EDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETG 186

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSN 327
             ++AL  F++M+  +++P E T  +V+SAC       +G QVH+     GF +   + N
Sbjct: 187 NYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVN 246

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I +YS CG+++ AC +   L  KD++SWNT+I  Y   NL + A+L + EM   G  P
Sbjct: 247 ALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 306

Query: 388 DEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAKNERIK 438
           ++ T  S+L   A  G I++   IH  V+I+  +  + V+NA      LI  YAK   I 
Sbjct: 307 NDVTMLSILPACAHLGAIDIGRWIH--VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDID 364

Query: 439 QAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
            A Q+  + +  R++ TWN +I GF ++G        FS +  + + PD+ T    LS+C
Sbjct: 365 AAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSAC 424

Query: 498 ARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTIS 555
           +    L  G+ I   + ++ N+  K+     MI L    G    +  + N M +E D + 
Sbjct: 425 SHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI 484

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDS 614
           W +L+ A   HG  +   S  K +    +I+P+      +LS   + AG  ++  +I  +
Sbjct: 485 WCSLLKACKIHGNLELGESFAKKLI---KIEPENPGSYVLLSNIYATAGKWNEVXKI-RT 540

Query: 615 MVNDYG 620
           ++ND G
Sbjct: 541 LLNDKG 546



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 225/442 (50%), Gaps = 19/442 (4%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ ++    L +CA  +    G Q+H + L+ G     +V  +++
Sbjct: 59  ALKLYV-VMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLI 117

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L   ++VF    + DV S+T  ++     G+++ A ++FD++P +D+  +NA
Sbjct: 118 SMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNA 177

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E G     + LF+EM K +V+ D  + A+V+S C  +G +E GRQ+HS +   G
Sbjct: 178 MISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG 237

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIR 278
           F   + +VNALI +Y  CG V  AC++ E       D IS+N ++ G   +   +EAL+ 
Sbjct: 238 FGSNLKIVNALIDLYSKCGEVETACELLEGLSNK--DVISWNTLIGGYTHMNLYKEALLL 295

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS----GFEAYTSVSNAAIT 331
           F++ML +   P+++T +S++ AC       +G  +H    K          +S+  + I 
Sbjct: 296 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLID 355

Query: 332 MYSSCGKIDEACMIF-ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           MY+ CG ID A  +  +    + + +WN MI  +A      +A   +  M+  GI PD+ 
Sbjct: 356 MYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 415

Query: 391 TFGSLLAS---SGFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           TF  LL++   SG +++   I   +  +  I   ++    +I     +   K+A ++ + 
Sbjct: 416 TFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINT 475

Query: 447 --MSPRNIITWNTLINGFLLNG 466
             M P  +I W +L+    ++G
Sbjct: 476 MPMEPDGVI-WCSLLKACKIHG 496



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 176/367 (47%), Gaps = 38/367 (10%)

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---AS 398
           A  +F  + E + + WN M   +A  +   SA+  Y+ M S+G+ P+ FTF  LL   A 
Sbjct: 28  AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87

Query: 399 SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-------- 450
           S   +  + IH  V   G   ++ V  +LIS YA+N R++ A ++F   S R        
Sbjct: 88  SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147

Query: 451 -----------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
                                  ++++WN +I+G+   G   + L+ F E++ + ++PDE
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T++  +S+CA+  S+  G+Q+H ++  +   S + + NA+I LY+KCG+++ +  +   
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           +  KD ISWN LI  Y      KEA+  F+ M   G   P+  T  ++L AC+H G +D 
Sbjct: 268 LSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDI 326

Query: 608 GTRI---FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
           G  I    D  +       A    + ++D+  + G +D A +V +S         W A+ 
Sbjct: 327 GRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMI 386

Query: 665 SACAAHG 671
              A HG
Sbjct: 387 FGFAMHG 393


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/481 (36%), Positives = 269/481 (55%), Gaps = 9/481 (1%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDML-VASLRPSEL-TFVSVMSAC--LCP-RVGYQVHAQ 313
           YNV+M      G  E+AL  F +ML  AS  P++  T    + +C  +C   VG  V A 
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
           A+K G  A   V ++ I MY+SCG +  A ++F   +E  +V WN +++ Y +       
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISA 430
           +  +  M  VG+  DE T  S++ + G I   ++ + +   V   G+  N ++  AL+  
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265

Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           YAK   I +A ++F  M  R+++ W+ +I+G+       + L  FSE+ ++ + P++ T+
Sbjct: 266 YAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTM 325

Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
              LS+CA + +L  GK +H YV +  L     LG A++  YAKCG +D ++  F  M  
Sbjct: 326 VSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV 385

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           K++ +W ALI   A +G G+EA+  F +M++ G I+P   TF  VL ACSH+ LV++G R
Sbjct: 386 KNSWTWTALIKGMATNGRGREALELFSSMREAG-IEPTDVTFIGVLMACSHSCLVEEGRR 444

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
            FDSM  DYG  P  +H  CM+DLLGRAG +DEA + I +  I+  +  W AL S+CA H
Sbjct: 445 HFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVH 504

Query: 671 GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
            N+ +G      ++         YVLLSNIYA+AG W++AA +R+ +K  G+ K PGCS 
Sbjct: 505 RNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSL 564

Query: 731 I 731
           I
Sbjct: 565 I 565



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 199/446 (44%), Gaps = 43/446 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQ-IHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N+ +     +GH +DALHLF++ +H++     D ++ +  L +C+ +     G  + AYA
Sbjct: 87  NVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYA 146

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ GL A   V ++++ +Y +  D+ + + VF   +   V  W                 
Sbjct: 147 VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMW----------------- 189

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
                         NA++    +NG     + +F+ M ++ V  D  +  SV++ C   G
Sbjct: 190 --------------NAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIG 235

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
             + G+ +   V + G +    +V AL+ MY  CG +  A ++F+  +    D ++++ M
Sbjct: 236 DAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSR--DVVAWSAM 293

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGF 319
           + G     +  EAL  F +M +A + P+++T VSV+SAC        G  VH+   +   
Sbjct: 294 ISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRL 353

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
              T +  A +  Y+ CG ID+A   F  +  K+  +W  +I   A    GR A+  +  
Sbjct: 354 SLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSS 413

Query: 380 MQSVGIRPDEFTF-GSLLASSGFIEMVEMIHAFVFIN---GIITNIQVSNALISAYAKNE 435
           M+  GI P + TF G L+A S    + E    F  +    GI   ++    ++    +  
Sbjct: 414 MREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAG 473

Query: 436 RIKQAYQIFHNMS-PRNIITWNTLIN 460
            + +AYQ    M    N + W  L++
Sbjct: 474 LVDEAYQFIRTMPIEPNAVIWRALLS 499



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 134/261 (51%), Gaps = 10/261 (3%)

Query: 408 IHAFVFINGIITNIQVS-NALISAYAKNERIKQAYQIFHNMSPRNIIT---WNTLINGFL 463
           +HA +  +G +T    S ++L+ A A +  +         + PR  ++   +N L+  FL
Sbjct: 35  LHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFL 94

Query: 464 LNGFPVQGLQHFSELL--MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
             G P   L  F E+L   S    D++T + AL SC+R+ +L  G+ +  Y +K  L++ 
Sbjct: 95  HAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVAD 154

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
             + +++I +YA CGD+  +  VF+   E   + WNA+++AY ++G+  E V  FK M +
Sbjct: 155 RFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLE 214

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
           VG +  D+ T  +V++AC   G    G  +    V++ G       ++ ++D+  + G +
Sbjct: 215 VG-VAFDEVTLVSVVTACGRIGDAKLGKWVA-GHVDEEGLARNPKLVTALMDMYAKCGEI 272

Query: 642 DEAERVINSQHIQARSDNWWA 662
            +A R+ +   +Q+R    W+
Sbjct: 273 GKARRLFDG--MQSRDVVAWS 291


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 204/686 (29%), Positives = 353/686 (51%), Gaps = 52/686 (7%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQN 120
           S  L AC    N   G  LH   + +GL     + N++++LY    D             
Sbjct: 43  SLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGD------------- 89

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
                W   LS    MGH             RDL  ++A+I+    N  E   +  F  +
Sbjct: 90  -----WENALSIFRNMGH-----------HKRDLVSWSAIISCFANNSMESRALLTF--L 131

Query: 181 HKLDVRRD-----NYSFASVLSVCDAGLL-EFGRQLHSLVTKSG-FSCLVSVVNALITMY 233
           H L   R+      Y F ++L  C   L    G  + + + K+G F   V V  ALI M+
Sbjct: 132 HMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMF 191

Query: 234 FNCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
              G ++  A  VF++ +    + +++ +M+   + +G +++A+  F  +LV+   P + 
Sbjct: 192 TKGGLDIQSARMVFDKMQHK--NLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKF 249

Query: 293 TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  S++SAC+      +G Q+H+  ++SG  +   V    + MY+    ++ +  IF  +
Sbjct: 250 TLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTM 309

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVE 406
              +++SW  +IS Y Q    + AI  +  M    + P+ FTF S+L   AS     + +
Sbjct: 310 LHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGK 369

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H      G+ T   V N+LI+ YA++  ++ A + F+ +  +N+I++NT  +    N 
Sbjct: 370 QLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADA---NA 426

Query: 467 FPVQGLQHFS-ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
             +   + F+ E+  + +    +T +  LS  A I ++  G+QIH  ++K+   + + + 
Sbjct: 427 KALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCIN 486

Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
           NA+I++Y+KCG+ + +L+VFN M  ++ I+W ++IS +A+HG   +A+  F  M ++G +
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIG-V 545

Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
           KP++ T+ AVLSACSH GL+D+  + F+SM  ++   P  +H +CM+DLLGR+G L EA 
Sbjct: 546 KPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAI 605

Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
             INS    A +  W     +C  H N +LG   A  +LERE   P+ Y+LLSN+YA+ G
Sbjct: 606 EFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEG 665

Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
            W++ A +R+ +K+  +IK+ G SWI
Sbjct: 666 RWDDVAALRKSMKQKKLIKETGYSWI 691



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 192/391 (49%), Gaps = 42/391 (10%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+   + +   S+ G   DA+ LF ++  S +  PD ++L++ L+AC  L   + G QLH
Sbjct: 213 LVTWTLMITRYSQLGLLDDAVDLFCRLLVS-EYTPDKFTLTSLLSACVELEFFSLGKQLH 271

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           ++ +R+GL +   V  T++ +Y  +  + + +++F+ + + +V SWT             
Sbjct: 272 SWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWT------------- 318

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
                             A+I+G  ++  E   I LF  M    V  + ++F+SVL  C 
Sbjct: 319 ------------------ALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKAC- 359

Query: 201 AGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
           A L +F  G+QLH    K G S +  V N+LI MY   G +  A K F     +  + IS
Sbjct: 360 ASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNIL--FEKNLIS 417

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           YN   D  A     +E+     ++    +  S  T+  ++S   C      G Q+HA  +
Sbjct: 418 YNTAADANAKALDSDESF--NHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIV 475

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
           KSGF     ++NA I+MYS CG  + A  +F  +  +++++W ++IS +A+      A+ 
Sbjct: 476 KSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALE 535

Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
            + EM  +G++P+E T+ ++L++   + +++
Sbjct: 536 LFYEMLEIGVKPNEVTYIAVLSACSHVGLID 566



 Score = 48.5 bits (114), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 48  HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARD 107
           H+     P  Y+   + AAC  +     G Q+HA  +++G      + N ++S+Y    +
Sbjct: 441 HTGVGASPFTYACLLSGAAC--IGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGN 498

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITG 163
             +  +VF+++   +V +WT+ +S   K G    A E+F +M +  +      Y A+++ 
Sbjct: 499 KEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSA 558

Query: 164 CTENGYEDIGIGLFREMH 181
           C+  G  D     F  MH
Sbjct: 559 CSHVGLIDEAWKHFNSMH 576


>gi|224125246|ref|XP_002319538.1| predicted protein [Populus trichocarpa]
 gi|222857914|gb|EEE95461.1| predicted protein [Populus trichocarpa]
          Length = 577

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 171/507 (33%), Positives = 279/507 (55%), Gaps = 10/507 (1%)

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPS 290
           MY   G + DA K+F+E    + D +S+N+M+ G    G  +     F+ M  +   R  
Sbjct: 1   MYAKNGVLTDAAKLFDEMP--MRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLD 58

Query: 291 ELTFVSVMSACLCPRVGY---QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
           + T  +++SAC  P +G+    VH  A+ +GF+   SV NA IT Y  CG       +F 
Sbjct: 59  QATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFD 118

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEMVE 406
            + E+++++W  +IS   Q  L R ++  ++EM +  + P+  T+  SL+A SG   + E
Sbjct: 119 EMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALRE 178

Query: 407 --MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              IH  V+  G+ ++  V +AL+  Y+K   +    QIF +    + ++   ++ GF  
Sbjct: 179 GCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQ 238

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
           NGF  + +Q F ++L +    D   +S  L      +SL  G+QIH  V+K +  S   +
Sbjct: 239 NGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFV 298

Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           GN +I +Y+KCGDL+ S +VF+ M   +++SWN++I+A+A+HG+G  A+  +K M+  G 
Sbjct: 299 GNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKG- 357

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
           ++P   TF ++L ACSH GLV+ G     SM   +   P  +H +C++D+LGRAG L+EA
Sbjct: 358 VEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEA 417

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAA 704
           +  I    I+     W AL  AC  HG+  +G+  A  L+    +KPS Y+LL+NIY++ 
Sbjct: 418 KTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYILLANIYSSK 477

Query: 705 GLWEEAANIRELLKRTGVIKQPGCSWI 731
           G W+E A   + +K   V K+ G SWI
Sbjct: 478 GRWKERAKTIKRMKEMCVAKETGISWI 504



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 12/444 (2%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRR-DNYSFA 193
           K G +  A ++FD+MP RD   +N MI+G  ++G  D+G G F++M  L   R D  +  
Sbjct: 4   KNGVLTDAAKLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLT 63

Query: 194 SVLSVCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
           ++LS CD   L F  + +H L   +GF   +SV NALIT YF CG      +VF+E    
Sbjct: 64  TILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLER 123

Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQ 309
             + I++  ++ GL       ++L  F +M    + P+ LT++S + AC      R G Q
Sbjct: 124 --NVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMACSGLQALREGCQ 181

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
           +H +  K G ++   V +A + MYS CG + +   IF    + D VS   +++ +AQ   
Sbjct: 182 IHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILAGFAQNGF 241

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNA 426
              A+  +++M   G   D     ++L   G    + + + IH+ V      +N  V N 
Sbjct: 242 EEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNG 301

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           LI+ Y+K   ++ + ++F  M   N ++WN++I  F  +G   + LQ + E+ +  + P 
Sbjct: 302 LINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVEPT 361

Query: 487 EYTLSVALSSCARISSLRHGKQ-IHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRV 544
           + T    L +C+ +  +  G + +      + L  +M     ++ +  + G L +    +
Sbjct: 362 DVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAGLLNEAKTFI 421

Query: 545 FNMMIEKDTISWNALISAYAQHGE 568
             + I+ D + W AL+ A   HG+
Sbjct: 422 EGLPIKPDVLVWQALLGACGIHGD 445



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/477 (24%), Positives = 206/477 (43%), Gaps = 45/477 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           NI ++   + G +      F Q+ S    + D  +L+T L+AC           +H  A+
Sbjct: 27  NIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRPELGFVNKMVHCLAV 86

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G +    V N +++ Y       S  +VF E+   +V +WT                 
Sbjct: 87  LNGFQREISVGNALITSYFKCGFSSSGMQVFDEMLERNVITWT----------------- 129

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
                         A+I+G  ++      + LF EM    V  ++ ++ S L  C +GL 
Sbjct: 130 --------------AIISGLVQSELYRDSLRLFVEMTNGLVEPNSLTYLSSLMAC-SGLQ 174

Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L  G Q+H  V K G      V +AL+ MY  CG++ D  ++FE A     D +S  ++
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQL--DKVSMTII 232

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSE---LTFVSVMSACLCPRVGYQVHAQAMKSGF 319
           + G A  G  EEA+  F  ML A            + V  A     +G Q+H+  +K  F
Sbjct: 233 LAGFAQNGFEEEAMQFFVKMLEAGTEIDSNMVSAVLGVFGADTSLGLGQQIHSLVIKRSF 292

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
            +   V N  I MYS CG ++++  +F+R+   + VSWN+MI+ +A+   G  A+  Y E
Sbjct: 293 GSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKE 352

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNE 435
           M+  G+ P + TF SLL +   + +V    E + +   ++ +   ++    ++    +  
Sbjct: 353 MRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMTEVHKLTPRMEHYACVVDMLGRAG 412

Query: 436 RIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTL 490
            + +A      +  + +++ W  L+    ++G P  G      L++S   +P  Y L
Sbjct: 413 LLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMGKYAAEHLILSAPEKPSPYIL 469


>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 618

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 192/620 (30%), Positives = 315/620 (50%), Gaps = 90/620 (14%)

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           V + +Q+P+       ++     G V  A  +FD+ PDRD+  + A++      G     
Sbjct: 31  VSNHVQDPN-----RRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDA 85

Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGR--QLHSLVTKSGFSCLVSVVNALIT 231
             LF    + D RR+  ++ ++LS    G    GR  +  +L  +     +VS  N ++ 
Sbjct: 86  RALF---DRPDARRNVVTWTALLS----GYARAGRVDEAEALFGRMPERNVVSW-NTMLE 137

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            Y + G V DAC +F      V D  S+N+++  L   G +++A   F  M      P  
Sbjct: 138 AYTSSGRVGDACTLFNGMP--VRDAGSWNILLAALVRSGNIDKARKLFDRM------PER 189

Query: 292 LTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
               +VM                      A+T++    +   +  G ++EA  +F  + E
Sbjct: 190 ----NVM----------------------AWTTM----VAGIARSGSVNEARALFDGMPE 219

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAF 411
           +++VSWN MIS YA+ +                                   M++  H  
Sbjct: 220 RNVVSWNAMISGYARNH-----------------------------------MIDEAHD- 243

Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           +F+     +I   N +I+ + +N+ +++A ++F  M  RN++TW T++NG+L +      
Sbjct: 244 LFMKMPTRDIASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETA 303

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           LQ F+ +L+  +RP++ T   A+ +C+ ++ L  G+Q+H  + K        + + ++ L
Sbjct: 304 LQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNL 363

Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
           YAKCG++  + +VFN+  EKD ISWN +I+AYA HG G EA+  ++ MQ+ G  KP+  T
Sbjct: 364 YAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENG-YKPNDVT 422

Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
           +  +LSACSH+GLVD+G RIF+ MV D      ++H +C++DL  RAG L +A+R+I+  
Sbjct: 423 YVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFL 482

Query: 652 HIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAA 711
            ++  S  W AL   C +HGN  +G + A  LLE E +    Y LL NIYA+AG W+EAA
Sbjct: 483 KVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAA 542

Query: 712 NIRELLKRTGVIKQPGCSWI 731
            IR  +   G+ KQPGCSWI
Sbjct: 543 KIRSEMNDRGLKKQPGCSWI 562



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 184/375 (49%), Gaps = 19/375 (5%)

Query: 96  NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP 155
           NT+L  Y ++  +     +F+ +   D  SW   L+A  + G++D A ++FD+MP+R++ 
Sbjct: 133 NTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKARKLFDRMPERNVM 192

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
            +  M+ G   +G  +    LF  M + +V   N   A +       +++   + H L  
Sbjct: 193 AWTTMVAGIARSGSVNEARALFDGMPERNVVSWN---AMISGYARNHMID---EAHDLFM 246

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           K     + S  N +IT +    N+  A ++F++      + +++  MM+G     + E A
Sbjct: 247 KMPTRDIAS-WNIMITGFIQNKNLERAQELFDKMPRR--NVVTWTTMMNGYLQSIQSETA 303

Query: 276 LIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L  F  ML+  +RP+++TF+  + AC        G QVH    K+ F+  T + +  + +
Sbjct: 304 LQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNL 363

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG+I  A  +F   +EKD++SWN MI+ YA   +G  AI  Y +MQ  G +P++ T+
Sbjct: 364 YAKCGEIILARKVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTY 423

Query: 393 GSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH--N 446
             LL++   SG + E + +    V    I    +    LI   ++  R+  A ++ H   
Sbjct: 424 VGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLK 483

Query: 447 MSPRNIITWNTLING 461
           + P + + WN L+ G
Sbjct: 484 VEPSSTV-WNALLGG 497



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVK 112
           ++P+  +    + AC+NL   + G Q+H    +   +    + +T+++LY    +++  +
Sbjct: 315 IRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILAR 374

Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENG 168
           +VF+  +  DV SW   ++A    G    A  +++KM +         Y  +++ C+ +G
Sbjct: 375 KVFNLSKEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKPNDVTYVGLLSACSHSG 434

Query: 169 YEDIGIGLFREMHK---LDVRRDNYS 191
             D G+ +F  M K   + VR ++Y+
Sbjct: 435 LVDEGLRIFEYMVKDRSIAVRDEHYT 460


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 213/689 (30%), Positives = 322/689 (46%), Gaps = 99/689 (14%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P   S  T L    + R+   G  LHA  +++   +  ++AN++++LY   + L   K V
Sbjct: 4   PSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFV 62

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG- 173
           F  IQN DV S                               +N +I G +++G      
Sbjct: 63  FERIQNKDVVS-------------------------------WNCIINGYSQHGPSGSSH 91

Query: 174 -IGLFREMHKLDVRRDNYSFASVLS----VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
            + LF+ M   +   + ++FA V +    + DA     GR  H++  K      V V ++
Sbjct: 92  VMELFQRMRAENTAPNAHTFAGVFTAASTLVDAA---GGRLAHAVAIKMDSCRDVFVGSS 148

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY   G   +A KVF+       + +S+  M+ G AS     EAL  FR M      
Sbjct: 149 LMNMYCKAGLTPEARKVFDTMPER--NSVSWATMISGYASQKLAAEALGLFRLMRREEEG 206

Query: 289 PSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            +E  F SV+SA   P +   G Q+H  A+K+G  +  SV NA +TMY+ CG +D+A   
Sbjct: 207 ENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQT 266

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASSGFIEM 404
           F    +K+ ++W+ MI+  AQ      A+  +  M   GIRP EFTF G + A S     
Sbjct: 267 FETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAA 326

Query: 405 VE--MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
            E   +H ++   G  + I V  AL+  YAK   I  A + F  +   +I+ W ++I G+
Sbjct: 327 WEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGY 386

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           + NG     L  +  + M  + P+E T++  L +C+ +++L  GKQIH   +K     ++
Sbjct: 387 VQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEV 446

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +G+A+ T+YAKCG L     VF  M  +D ISWNA+IS  +Q+G GKEA+  F+ MQ  
Sbjct: 447 PIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G  KPD  TF  +LSACSH GLV+ G   F  M +++G  P  +H +CM+D+L RAG L 
Sbjct: 507 G-TKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLK 565

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
           EA     S  I                                                 
Sbjct: 566 EAIEFTESATID------------------------------------------------ 577

Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             G+WE+   +R ++K  GV K+PGCSWI
Sbjct: 578 -HGMWEDVERVRRMMKLRGVSKEPGCSWI 605



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 35/275 (12%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   ++SG    AL LF  +H S  ++P  ++    + AC++L  A  G Q+H Y L+ G
Sbjct: 282 ITGXAQSGDSDKALKLFSSMHLS-GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLG 340

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            ++  +V   ++ +Y     +V  ++ F  +Q PD+  WT+                   
Sbjct: 341 FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTS------------------- 381

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
                       MI G  +NG  +  + L+  M    +  +  + ASVL  C +   LE 
Sbjct: 382 ------------MIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQ 429

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           G+Q+H+   K GF   V + +AL TMY  CG + D   VF        D IS+N M+ GL
Sbjct: 430 GKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPAR--DVISWNAMISGL 487

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           +  G  +EAL  F +M +   +P  +TFV+++SAC
Sbjct: 488 SQNGCGKEALELFEEMQLEGTKPDYVTFVNILSAC 522



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G  +DAL L+ ++     L P+  ++++ L AC++L     G Q+HA  ++ G     
Sbjct: 388 QNGENEDALSLYGRMEMEGIL-PNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEV 446

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM--- 149
            + + + ++Y     L     VF  +   DV SW   +S  ++ G    A E+F++M   
Sbjct: 447 PIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506

Query: 150 -PDRDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS 191
               D   +  +++ C+  G  + G G FR M     +D R ++Y+
Sbjct: 507 GTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYA 552


>gi|449450916|ref|XP_004143208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 185/550 (33%), Positives = 292/550 (53%), Gaps = 14/550 (2%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
               +S+C  + LL+FG Q+HS + K GFS    +  AL+ MY  C ++ DA KVF+E  
Sbjct: 71  LTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMS 130

Query: 251 GYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
              C  + ++N ++ G    G    A+  F +ML   + P+  +    +  C   +   +
Sbjct: 131 ---CPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDL 187

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+HA ++K  F +   V    I MYS C  + ++  +F  +  K++ +W +MIS YA+
Sbjct: 188 GSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR 247

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQV 423
             L   A++   EM  + ++P+  T+ SLL+S       +  + IH  +   G  +N  +
Sbjct: 248 NQLPHEAMILMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYI 307

Query: 424 SNALISAYAKNERIKQAY-QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +  L++AY++     + Y ++  N+   + I+WN +I GF   G   + L+ F ++   +
Sbjct: 308 AVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREK 367

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
              D +T +    +    S+L  GKQIHG V K      +S+ N ++++YA+ G +  S 
Sbjct: 368 FDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSK 427

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF+MM E D ISWN+L+S  A HG G+EA+  F+ M+    IKPD  +F AVL+ACSH 
Sbjct: 428 MVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC-IKPDNTSFLAVLTACSHV 486

Query: 603 GLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           GL+D G   F  M N     P + +H + ++DL GRAG L EAE  I S  I+     + 
Sbjct: 487 GLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYK 546

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL SAC  HGN  +    A  LLE     P+ Y++LSN     G W++AA+IR L+   G
Sbjct: 547 ALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRG 606

Query: 722 VIKQPGCSWI 731
           V K+PG SW+
Sbjct: 607 VKKEPGFSWM 616



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/578 (24%), Positives = 266/578 (46%), Gaps = 46/578 (7%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H   P    L+ T++ C       FG Q+H+  ++ G    P++   ++ +Y     +  
Sbjct: 62  HGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISD 121

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
             +VF E+  P V +W                               N+++TG  + GY 
Sbjct: 122 AHKVFDEMSCPSVVTW-------------------------------NSLVTGYLQAGYP 150

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            + + LF EM K  +    +S +  L  C      + G QLH++  K  FS  V V   L
Sbjct: 151 LMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGL 210

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY  C N+ D+ +VF+       +  ++  M+ G A      EA+I  R+ML  +L+P
Sbjct: 211 IDMYSKCCNLQDSRRVFDIMLNK--NVFTWTSMISGYARNQLPHEAMILMREMLHLNLKP 268

Query: 290 SELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSS-CGKIDEACMI 345
           + +T+ S++S+  CPR      Q+H + +  G+E+   ++   +T YS  CG +++   +
Sbjct: 269 NGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKV 328

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
            + ++  D +SWN +I+ +    +G  A+  +++M+      D FTF S+  + G    +
Sbjct: 329 CSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388

Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E    IH  V+  G   N+ V N L+S YA++  I+ +  +F  M+  ++I+WN+L++G 
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +G   + +  F ++  + ++PD  +    L++C+ +  L  G +    +  + L+   
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPP 508

Query: 523 SLGN--AMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            L +   ++ L+ + G L +    + ++ IE     + AL+SA   HG    A+   K +
Sbjct: 509 KLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKL 568

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            ++    P  AT+  + +A    G  DD   I   M N
Sbjct: 569 LELYPYDP--ATYIMLSNALGRDGYWDDAASIRRLMSN 604



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 181/379 (47%), Gaps = 39/379 (10%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G+   A+ LF+++     ++P  +SLS  L  C+ L+    G+QLHA +L+    +  
Sbjct: 146 QAGYPLMAVSLFLEMLKK-GIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNV 204

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   ++ +Y    +L   +RVF  + N +V++WT+ +S   +           +++P  
Sbjct: 205 VVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR-----------NQLP-- 251

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLH 211
               + AMI              L REM  L+++ +  ++ S+LS        +  +Q+H
Sbjct: 252 ----HEAMI--------------LMREMLHLNLKPNGMTYNSLLSSFSCPRHFDKCKQIH 293

Query: 212 SLVTKSGFSCLVSVVNALITMYFN-CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
             +   G+     +   L+T Y   CG++ D  KV    +  + D IS+N ++ G  ++G
Sbjct: 294 CRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIR--MSDQISWNAVIAGFTNLG 351

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSN 327
             EEAL  F  M          TF S+  A         G Q+H    K+G+    SV N
Sbjct: 352 IGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQN 411

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
             ++MY+  G I ++ M+F+ + E D++SWN+++S  A    G  AI  + +M+   I+P
Sbjct: 412 GLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCIKP 471

Query: 388 DEFTFGSLLASSGFIEMVE 406
           D  +F ++L +   + +++
Sbjct: 472 DNTSFLAVLTACSHVGLLD 490



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           LL    V  +Q   +LL     P    L+  +S C + + L  G Q+H  ++K       
Sbjct: 44  LLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNP 103

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +  A++ +Y KC  +  + +VF+ M     ++WN+L++ Y Q G    AVS F  M   
Sbjct: 104 YIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKK 163

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           G I+P   + +  L  CS     D G+++
Sbjct: 164 G-IEPTPFSLSGGLVGCSQLQKGDLGSQL 191


>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
 gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 183/574 (31%), Positives = 306/574 (53%), Gaps = 12/574 (2%)

Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVS 224
           +N    +   L  E  +     + Y    ++S C  +G    G Q HS + K GF   V 
Sbjct: 46  QNTSSPVDSDLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVY 105

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           + +A++ MY  CG +  A  +F++        +++N ++ G  +V   + A+  F  ML 
Sbjct: 106 ICSAVVDMYAKCGEISSARVLFDQMPQRTV--VTWNSLIYGYLAVNCPKIAIELFIKMLK 163

Query: 285 ASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
           A++  S  +  S ++ C       VG QVH   +K+G      V  + + MYS CG +D+
Sbjct: 164 AAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDD 223

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS-SG 400
           + ++F  +  +++++W +M++ Y+Q      A+    EM    +RP+  T+ SLL+S SG
Sbjct: 224 SRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSG 283

Query: 401 --FIEMVEMIHAFVFINGIITNIQVSNALISAYAK-NERIKQAYQIFHNMSPRNIITWNT 457
              +     +H  +   G+ +N+ ++  L++ Y+K +  ++   ++   +   + I WN 
Sbjct: 284 PDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNA 343

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
           +I G+   G   + L+ F E+  + +  D YTL+  + +    S L  GK +H  + +  
Sbjct: 344 VIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTG 403

Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
            IS +++ N ++++YA+CG +  S RVF  M E D ISWNAL++A+A HG G+EAV  F+
Sbjct: 404 YISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFE 463

Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLG 636
            M+    IKP+ +TF AVL ACSH G VD G   FD+M +D    P + +H + ++D  G
Sbjct: 464 QMRKT-EIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFG 522

Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVL 696
           RAGYL+EAE  INS  I      + AL SA   HGN  +    A  LLE   + P+ YVL
Sbjct: 523 RAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYVL 582

Query: 697 LSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSW 730
           LS++    G W++AA++R+L+   G+ K+PG SW
Sbjct: 583 LSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYSW 616



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/586 (24%), Positives = 283/586 (48%), Gaps = 21/586 (3%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           + A HL  +  +SH    + +S S T  +  N  ++   + L A   R G  + P+  N 
Sbjct: 17  KSANHLLSRALTSHNHHEE-HSSSRTFNSNQN-TSSPVDSDLIAEFTRHGSLSNPYFLNK 74

Query: 98  ILSLYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           I+S    +       +  S I       +VY  +  +    K G +  A  +FD+MP R 
Sbjct: 75  IVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRT 134

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHS 212
           +  +N++I G        I I LF +M K  +    +S +S L+ C      E G Q+H 
Sbjct: 135 VVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHG 194

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L+ K+G    V V  +L+ MY  CG+V D+  VF+       + I++  M+ G + + + 
Sbjct: 195 LILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNR--NVITWTSMVTGYSQIEKP 252

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPR-VGY--QVHAQAMKSGFEAYTSVSNAA 329
           +EA+   ++M++  LRP+ +T+ S++S+   P  + Y  QVH   ++ G E+   ++   
Sbjct: 253 DEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATL 312

Query: 330 ITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
           +T+YS C   +++   + + +   D ++WN +I+ Y++      A+  + EM+  GI  D
Sbjct: 313 VTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDID 372

Query: 389 EFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            +T  S+   + +S F+E  + +HA +   G I+++ V N L+S YA+   I  + ++F 
Sbjct: 373 SYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFW 432

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M   ++I+WN L+  F  +G+  + ++ F ++  +E++P+  T    L +C+ +  +  
Sbjct: 433 FMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDK 492

Query: 506 GKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISA 562
           G +    +  + L+  + + +  +++  + + G L+ +    N M I      + AL+SA
Sbjct: 493 GIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSA 552

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
              HG  + A    K + ++     D AT+  + S  +  G  DD 
Sbjct: 553 SLVHGNREIAARSAKKLLELW--PNDPATYVLLSSVLTVDGNWDDA 596



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 10/188 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  S+ G +++AL  F ++  +  +  D Y+L++ + A  N      G  +HA   
Sbjct: 342 NAVIAGYSKLGRHEEALRCFHEMKQA-GIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIH 400

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R G  ++ +V N ++S+Y     +   KRVF  ++  DV SW   L+A    G+   A E
Sbjct: 401 RTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVE 460

Query: 145 VFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
           +F++M   ++      + A++  C+  G+ D GI  F  M K D+  +        S+ D
Sbjct: 461 LFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTM-KSDILLEPLKVEHYASLVD 519

Query: 201 AGLLEFGR 208
                FGR
Sbjct: 520 T----FGR 523


>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 218/665 (32%), Positives = 325/665 (48%), Gaps = 55/665 (8%)

Query: 79  LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
           LHA A+ +GL A+  V N++ + Y       +  RVF+   + D  S+ T LSA      
Sbjct: 80  LHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSAT----- 134

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
                      PD D  +  A                  R +   DVR D  +F   LS+
Sbjct: 135 -----------PDPDDALAFAA-----------------RMLRAGDVRPDAITFTVTLSL 166

Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
               G     RQLH+LV+++G +  V V NAL+T Y    ++  A KVFEE      D +
Sbjct: 167 AAGRGEGRLVRQLHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPAR--DLV 224

Query: 258 SYNVMMDGLASVGRVEEALIR--FRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHA 312
           S+N ++ GLA  G     +IR   R +    +RP  ++  SV+SAC       +G Q+H 
Sbjct: 225 SWNALVCGLAQDGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHG 284

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            A+K G E + S++N  + MY  CG    A  +F  + E+D+VSW T++S   +      
Sbjct: 285 FAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSMDRE-----D 339

Query: 373 AILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNALIS 429
           A+  +  M   G+ P+E TF ++L A  G     E  M+HA     G+      +N+ I+
Sbjct: 340 AVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFIT 399

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL-RPDEY 488
            YAK  R+  A  IF  M    +I WN LI+G+  N      L+ F  L M ++ +P E 
Sbjct: 400 MYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAF--LSMVKITKPSET 457

Query: 489 TLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           T +  LS+   +   S+ +G+  H   LK  L +   +  A+I LYAK G L+ S + F 
Sbjct: 458 TFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFG 517

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
             + +  I+W A+ISA ++HG     VS F  M   G + PD     +VL+AC ++G   
Sbjct: 518 ETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARSG-VTPDGVVLLSVLTACRYSGFAS 576

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
            G  IF+SM   +G     +H +C++D+LGRAG L+EAE ++             +L  A
Sbjct: 577 LGREIFESMATKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGA 636

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  HGN  +G  +AG+LLE E  +   YVLLSNIYA  G W   A +R  ++  GV K+ 
Sbjct: 637 CRIHGNTDVGERVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEV 696

Query: 727 GCSWI 731
           G SW+
Sbjct: 697 GFSWV 701



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 274/604 (45%), Gaps = 88/604 (14%)

Query: 31  LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
           LS +    DAL    ++  +  ++PD  + + TL+  A         QLHA   RAG+ A
Sbjct: 131 LSATPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGIAA 190

Query: 91  YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
              V N +++ Y     L + ++VF E                               MP
Sbjct: 191 DVFVGNALVTAYARGASLDAARKVFEE-------------------------------MP 219

Query: 151 DRDLPVYNAMITGCTENG---YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            RDL  +NA++ G  ++G    E I +   R +    VR D  S  SV+S C   G LE 
Sbjct: 220 ARDLVSWNALVCGLAQDGECPAEVIRV-FLRMLKHGGVRPDRISVCSVISACGGEGKLEL 278

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GRQ+H    K G    VS+ N L+ MY+ CG    A ++FE       D +S+  +M   
Sbjct: 279 GRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGER--DVVSWTTVM--- 333

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL--CP-RVGYQVHAQAMKSGFEAYT 323
            S+ R E+A+  F  M+   + P+E+TFV+++SA    CP R G  VHA  +K+G     
Sbjct: 334 -SMDR-EDAVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKP 391

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
           + +N+ ITMY+   ++D+A MIF  +   ++++WN +IS YAQ  + + A+ A+L M  +
Sbjct: 392 AAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSMVKI 451

Query: 384 GIRPDEFTFGSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
             +P E TF S+L++   +E V     +M H      G+  +  VS ALI  YAK   ++
Sbjct: 452 -TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLE 510

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
           ++++ F     R++I W  +I+    +G     +  F+++  S + PD   L   L++C 
Sbjct: 511 ESWKAFGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACR 570

Query: 499 RISSLRHGKQI-------HGYVL--------------------KNNLISKMSLG---NAM 528
                  G++I       HG  L                       L+ +M  G   +AM
Sbjct: 571 YSGFASLGREIFESMATKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAM 630

Query: 529 ITLYAKC---GDLDCSLRVFNMMIEKDTISWNA---LISAYAQHGEGKEAVSCFKAMQDV 582
            +L   C   G+ D   RV  +++E +     A   L + YA+ G+        + M+ +
Sbjct: 631 QSLLGACRIHGNTDVGERVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGM 690

Query: 583 GRIK 586
           G  K
Sbjct: 691 GVKK 694



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 174/400 (43%), Gaps = 61/400 (15%)

Query: 21  LLKLNISLANLSRSGH-YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQL 79
           L+  N  +  L++ G    + + +F+++     ++PD  S+ + ++AC        G Q+
Sbjct: 223 LVSWNALVCGLAQDGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQI 282

Query: 80  HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
           H +A++ G++ +  +AN ++++Y         +R+F  +   DV SWTT +S        
Sbjct: 283 HGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMSM------- 335

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV- 198
                      DR                 ED  + LF  M +  V  +  +F ++LS  
Sbjct: 336 -----------DR-----------------ED-AVSLFNGMMRDGVAPNEVTFVAILSAM 366

Query: 199 ---CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
              C A     G+ +H++  K+G S   +  N+ ITMY     + DA  +F      +  
Sbjct: 367 PGHCPA---REGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFG-----LMP 418

Query: 256 H---ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-----G 307
           H   I++N ++ G A     ++AL  F  M V   +PSE TF S++SA           G
Sbjct: 419 HPEVIAWNALISGYAQNEMCQDALEAFLSM-VKITKPSETTFASILSAVTAVETVSMAYG 477

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQR 367
              H Q +K G  A   VS A I +Y+  G ++E+   F     + +++W  +IS  ++ 
Sbjct: 478 QMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKH 537

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEM 404
                 +  + +M   G+ PD     S+L +   SGF  +
Sbjct: 538 GNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASL 577


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 212/724 (29%), Positives = 351/724 (48%), Gaps = 50/724 (6%)

Query: 16  TSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAF 75
           T +++ L  +I  A+ S +G Y  +L  F  +  S +  PD ++    ++ACA L     
Sbjct: 86  TRRDIFLWNSIIKAHFS-NGDYARSLCFFFSMLLSGQ-SPDHFTAPMVVSACAELLWFHV 143

Query: 76  GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           G  +H   L+ G        NT +                         S+  F S C  
Sbjct: 144 GTFVHGLVLKHG----GFDRNTAVGA-----------------------SFVYFYSKC-- 174

Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL--DVRRDN-YSF 192
            G +  AC VFD+MPDRD+  + A+I+G  +NG  + G+G   +MH    DV + N  + 
Sbjct: 175 -GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL 233

Query: 193 ASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
                 C + G L+ GR LH    K+G +    V +++ + Y   GN  +A   F E   
Sbjct: 234 ECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGD 293

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVG 307
              D  S+  ++  LA  G +EE+   F +M    + P  +    +++      L P+ G
Sbjct: 294 E--DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQ-G 350

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNTMISTYAQ 366
              H   ++  F   ++V N+ ++MY     +  A  +F R+ +E +  +WNTM+  Y +
Sbjct: 351 KAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGK 410

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQV 423
                  I  + ++Q++GI  D  +  S+++S   I  V   + +H +V    +   I V
Sbjct: 411 MKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISV 470

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            N+LI  Y K   +  A+++F   +  N+ITWN +I  ++      + +  F  ++    
Sbjct: 471 VNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENF 529

Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
           +P   TL   L +C    SL  G+ IH Y+ +      +SL  A+I +YAKCG L+ S  
Sbjct: 530 KPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRE 589

Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
           +F+   +KD + WN +IS Y  HG+ + A++ F  M++   +KP   TF A+LSAC+HAG
Sbjct: 590 LFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE-SDVKPTGPTFLALLSACTHAG 648

Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
           LV+ G ++F  M + Y   P   H SC++DLL R+G L+EAE  + S         W  L
Sbjct: 649 LVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTL 707

Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
            S+C  HG   +G  +A   +  +      Y++L+N+Y+AAG WEEA   RE+++ +GV 
Sbjct: 708 LSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVG 767

Query: 724 KQPG 727
           K+ G
Sbjct: 768 KRAG 771



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 159/617 (25%), Positives = 288/617 (46%), Gaps = 39/617 (6%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + +++  +  +S+    G  + +  VF  +  RD+ ++N++I     NG     +  F  
Sbjct: 56  SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTK-SGFSCLVSVVNALITMYFNC 236
           M       D+++   V+S C A LL F  G  +H LV K  GF    +V  + +  Y  C
Sbjct: 116 MLLSGQSPDHFTAPMVVSAC-AELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL---RPSELT 293
           G + DAC VF+E      D +++  ++ G    G  E  L     M  A     +P+  T
Sbjct: 175 GFLQDACLVFDEMPDR--DVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
                 AC      + G  +H  A+K+G  +   V ++  + YS  G   EA + F  L 
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EM 407
           ++D+ SW ++I++ A+      +   + EMQ+ G+ PD      L+   G + +V   + 
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNG 466
            H FV  +    +  V N+L+S Y K E +  A ++F  +S   N   WNT++ G+    
Sbjct: 353 FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
             V+ ++ F ++    +  D  + +  +SSC+ I ++  GK +H YV+K +L   +S+ N
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDT--ISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
           ++I LY K GDL  + R+F    E DT  I+WNA+I++Y    + ++A++ F  M     
Sbjct: 473 SLIDLYGKMGDLTVAWRMF---CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVS-EN 528

Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH------LSCMLDLLGRA 638
            KP   T   +L AC + G ++ G  I       + +I   +H       + ++D+  + 
Sbjct: 529 FKPSSITLVTLLMACVNTGSLERGQMI-------HRYITETEHEMNLSLSAALIDMYAKC 581

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G+L+++  + ++ + Q  +  W  + S    HG++    I     +E    KP+    L+
Sbjct: 582 GHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGDVE-SAIALFDQMEESDVKPTGPTFLA 639

Query: 699 NIYAA--AGLWEEAANI 713
            + A   AGL E+   +
Sbjct: 640 LLSACTHAGLVEQGKKL 656



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 134/565 (23%), Positives = 262/565 (46%), Gaps = 51/565 (9%)

Query: 198 VCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
           +CD  L LE  R+ ++L+   G S  + V + LI+ Y + G    + +VF        D 
Sbjct: 33  LCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR--DI 90

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
             +N ++    S G    +L  F  ML++   P   T   V+SAC   L   VG  VH  
Sbjct: 91  FLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGL 150

Query: 314 AMK-SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
            +K  GF+  T+V  + +  YS CG + +AC++F  + ++D+V+W  +IS + Q      
Sbjct: 151 VLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEG 210

Query: 373 AILAYLEMQSVGIRPDEFTFGSL------LASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
            +    +M S G   D+    +L       ++ G ++    +H F   NG+ ++  V ++
Sbjct: 211 GLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS 270

Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
           + S Y+K+    +AY  F  +   ++ +W ++I     +G   +    F E+    + PD
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPD 330

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
              +S  ++   ++  +  GK  HG+V+++      ++ N+++++Y K   L  + ++F 
Sbjct: 331 GVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFC 390

Query: 547 MMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
            + E+ +  +WN ++  Y +     + +  F+ +Q++G I+ D A+ T+V+S+CSH G V
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG-IEIDSASATSVISSCSHIGAV 449

Query: 606 ---------------DDGTRIFDSMVNDYG-----------FIPAEDHLSCMLDLLGRAG 639
                          D    + +S+++ YG           F  A+ ++     ++    
Sbjct: 450 LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYV 509

Query: 640 YLDEAERVIN------SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD-KPS 692
           + +++E+ I       S++ +  S     L  AC   G+L  G++I   + E E +   S
Sbjct: 510 HCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLS 569

Query: 693 VYVLLSNIYAAAGLWEEAANIRELL 717
           +   L ++YA  G  E++   REL 
Sbjct: 570 LSAALIDMYAKCGHLEKS---RELF 591


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 167/484 (34%), Positives = 265/484 (54%), Gaps = 10/484 (2%)

Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
           Y C     N ++ G       +EAL+ +++M+V  L P   TF S+  +C     G Q+H
Sbjct: 54  YTC-----NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEGKQIH 108

Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
             + K GF + T   N  + MYS+CG +  A  +F ++++K +VSW TMI  +AQ +   
Sbjct: 109 CHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPN 168

Query: 372 SAILAYLEM-QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
            A+  +  M +S  ++P+E T  ++L   A +  + MV+ IH ++  +G   ++ ++  L
Sbjct: 169 EAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVL 228

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  Y K   ++ A  +F     +N+ +WN +ING + +    + L  F E+    ++ D+
Sbjct: 229 MDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDK 288

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T++  L +C  + +L  GK +H Y+ K  +   ++LG A++ +YAKCG ++ +++VF+ 
Sbjct: 289 VTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHE 348

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
           M EKD ++W ALI   A  G+ + A+  F  M   G +KPD  TF  VL+ACSHAG VD+
Sbjct: 349 MPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKG-VKPDAITFVGVLAACSHAGFVDE 407

Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
           G   F+SM + YG  P  +H   ++D+LGRAG + EAE +I S  +         L  AC
Sbjct: 408 GISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGAC 467

Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
             HGNL      A  LLE +      YVLLSNIY ++  WEEA   REL+   G+ K PG
Sbjct: 468 RIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPG 527

Query: 728 CSWI 731
           CS I
Sbjct: 528 CSQI 531



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 245/543 (45%), Gaps = 78/543 (14%)

Query: 77  NQLHAYALRAGLKAYPHVANTILSL--YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
            Q+HA  LR GL   P  A+ I++    + +  L   + VFS+I NP             
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNP------------- 51

Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
                 Y C              N++I GCT+       +  ++EM    +  D Y+F S
Sbjct: 52  ----TSYTC--------------NSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPS 93

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           +   C       G+Q+H   TK GF+      N L+ MY NCG +V A KVF++ +    
Sbjct: 94  LFKSCRNS--SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTV 151

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPR---VGYQV 310
             +S+  M+   A   +  EA+  F  M+ + +++P+E+T V+V++AC   R   +  ++
Sbjct: 152 --VSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRI 209

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H    + GF  +  ++   + +Y  CG +  A  +F + QEK++ SWN MI+ + + +  
Sbjct: 210 HEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNY 269

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+L + EMQ+ GI+ D+ T  SLL +    G +E+ + +HA++    I  ++ +  AL
Sbjct: 270 EEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTAL 329

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +  YAK   I+ A Q+FH M  ++++TW  LI G  + G     LQ+F E+ +  ++PD 
Sbjct: 330 VDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDA 389

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
            T    L++C+    +  G               +S  N+M   Y               
Sbjct: 390 ITFVGVLAACSHAGFVDEG---------------ISHFNSMSDTYG-------------- 420

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
            I+     +  L+    + G   EA    K+M     + PDQ     +L AC   G ++ 
Sbjct: 421 -IQPTIEHYGGLVDILGRAGRIAEAEELIKSMP----MAPDQFVLGGLLGACRIHGNLEA 475

Query: 608 GTR 610
             R
Sbjct: 476 AER 478



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/443 (25%), Positives = 207/443 (46%), Gaps = 48/443 (10%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           +Q+AL LF Q      L PD Y+  +   +C   RN++ G Q+H ++ + G  +  +  N
Sbjct: 69  HQEAL-LFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTYAQN 124

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           T++++Y N   LVS ++VF ++++  V SW T +    +    + A  +FD+M       
Sbjct: 125 TLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM------- 177

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVT 215
                                  M   +V+ +  +  +VL+ C  A  L   +++H  + 
Sbjct: 178 -----------------------MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYID 214

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           + GF   V +   L+ +Y  CG V  A  +F++A+    +  S+N+M++G       EEA
Sbjct: 215 EHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEK--NLFSWNIMINGHVEDSNYEEA 272

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
           L+ FR+M    ++  ++T  S++ AC       +G  +HA   K   +   ++  A + M
Sbjct: 273 LLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDM 332

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG I+ A  +F  + EKD+++W  +I   A      +A+  + EM   G++PD  TF
Sbjct: 333 YAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITF 392

Query: 393 GSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             +LA+   +GF+ E +   ++     GI   I+    L+    +  RI +A ++  +M 
Sbjct: 393 VGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMP 452

Query: 449 PRNIITWNTLINGFLLNGFPVQG 471
               +  +  + G LL    + G
Sbjct: 453 ----MAPDQFVLGGLLGACRIHG 471



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 5/164 (3%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L   NI +       +Y++AL LF ++ +   +K D  ++++ L AC +L     G  LH
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTK-GIKGDKVTMASLLLACTHLGALELGKWLH 311

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           AY  +  +     +   ++ +Y     + +  +VF E+   DV +WT  +      G  +
Sbjct: 312 AYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAE 371

Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM 180
            A + FD+M  +    D   +  ++  C+  G+ D GI  F  M
Sbjct: 372 NALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415


>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
 gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
 gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
          Length = 804

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 209/715 (29%), Positives = 361/715 (50%), Gaps = 53/715 (7%)

Query: 38  QDALHLFVQIHSSHK--LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA 95
           ++AL L+  ++ + +  ++ D Y+ S  L ACA  R    G  +HA+ LR   ++ P  A
Sbjct: 84  EEALRLYALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHMLRRA-RSLPDTA 142

Query: 96  ---NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
              N++L+LY +                          S   +   VD    +FD MP R
Sbjct: 143 VLRNSLLNLYAS--------------------------SVRYREARVDVVRRLFDAMPKR 176

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHS 212
           ++  +N +     + G     + LF  M +   R    SF ++     A    +  QL+ 
Sbjct: 177 NVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPFQLYG 236

Query: 213 LVTKSGFSCL--VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           L+ K G   +  + VV++ I M+   G+V  A +VF+ A     +   +N M+ G    G
Sbjct: 237 LLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTE--VWNTMITGYVQNG 294

Query: 271 RVEEALIRFRDMLVASLRPSEL-TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV- 325
           +  EA+  F  +L +   P ++ TF+S ++A    +   +G Q+H   +K        + 
Sbjct: 295 QFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVIL 354

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            NA + MYS CG +  A  +F RL EKDIV+WNTM++ + Q +     +L   EMQ  G 
Sbjct: 355 GNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGF 414

Query: 386 RPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             D  T  ++L++S   G +++ +  H ++  +GI     + + LI  YAK+ R++ A +
Sbjct: 415 AADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGI-EGEGLESYLIDMYAKSGRVEMAQR 473

Query: 443 IFHNM--SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
           +F +   + R+ +TWN +I G+  +G P + +  F  +L + L P   TL+  L +C  +
Sbjct: 474 VFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPV 533

Query: 501 SS-LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
              +  GKQIH + ++  L + + +G A+I +Y+KCG++  +  VF  M  K T+++  +
Sbjct: 534 GGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTM 593

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           IS   QHG GK+A++ F +MQ+ G +KPD  TF + +SAC+++GLVD+G  ++ SM + +
Sbjct: 594 ISGLGQHGFGKKALALFNSMQEKG-LKPDAVTFLSAISACNYSGLVDEGLALYRSM-DSF 651

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR-SDNWWALFSACAAHGNLRLGRI 678
           G      H  C+ DLL +AG ++EA   I     +      W +L ++C A G   L ++
Sbjct: 652 GISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKL 711

Query: 679 IAGLLL--EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +   LL  E++       VLLS + AA   W  A ++R+ ++  G+ K+ G SWI
Sbjct: 712 VTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 167/648 (25%), Positives = 304/648 (46%), Gaps = 67/648 (10%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMH---KLDVRRDN 189
           K G +D+A  +  +   R  P    NA++         +  + L+  ++   +  VR D+
Sbjct: 46  KQGRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDH 105

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV--NALITMYFNCGNV----VDA 242
           Y++++ L+ C  +  L  GR +H+ + +   S   + V  N+L+ +Y +        VD 
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165

Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
            +   +A     + +S+N +       GR +EAL  F  ML    RP+ ++FV++  A +
Sbjct: 166 VRRLFDAMPKR-NVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV 224

Query: 303 C--PRVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
              P   +Q++   +K G E      V ++AI M+S  G +  A  +F R  +K+   WN
Sbjct: 225 ADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWN 284

Query: 359 TMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFI 414
           TMI+ Y Q      AI  + + + S  +  D  TF S L +   S  + + + +H ++ I
Sbjct: 285 TMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYL-I 343

Query: 415 NGIITNIQV--SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
            G+   + V   NAL+  Y++   ++ A+ +F  +  ++I+TWNT++  F+ N F ++GL
Sbjct: 344 KGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGL 403

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
               E+  S    D  TL+  LS+ +    L+ GKQ HGY++++  I    L + +I +Y
Sbjct: 404 LLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDMY 462

Query: 533 AKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           AK G ++ + RVF+     ++D ++WNA+I+ Y Q G+ ++A+  F+AM + G ++P   
Sbjct: 463 AKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPTSV 521

Query: 591 TFTAVLSACSHAG----------------LVDDGTRIFDSMVNDY---GFIPAEDHL--- 628
           T  +VL AC   G                 +D    +  ++++ Y   G I   +++   
Sbjct: 522 TLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGG 581

Query: 629 ---------SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
                    + M+  LG+ G+  +A  + NS   +    +     SA +A      G + 
Sbjct: 582 MTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACN--YSGLVD 639

Query: 680 AGLLLEREQDK------PSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
            GL L R  D       P  +  ++++ A AG  EEA    E L   G
Sbjct: 640 EGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEG 687



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 212/471 (45%), Gaps = 50/471 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++G + +A+ LF +I  S ++  D+ +  + L A +  ++ + G QLH Y +
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 343

Query: 85  RAGLKAYPHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   +  P +  N ++ +Y    ++ +   +F  +   D+ +W                 
Sbjct: 344 KGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTW----------------- 386

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAG 202
                         N M+T   +N ++  G+ L  EM K     D+ +  +VLS   + G
Sbjct: 387 --------------NTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTG 432

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ G+Q H  + + G      + + LI MY   G V  A +VF+  K    D +++N M
Sbjct: 433 DLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAM 491

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-----RVGYQVHAQAMKS 317
           + G    G+ E+A++ FR ML A L P+ +T  SV+ AC  P       G Q+H  A++ 
Sbjct: 492 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC-DPVGGGVYSGKQIHCFAVRR 550

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +    V  A I MYS CG+I  A  +F  +  K  V++ TMIS   Q   G+ A+  +
Sbjct: 551 CLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALF 610

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             MQ  G++PD  TF S +++   SG ++    ++  +   GI    Q    +    AK 
Sbjct: 611 NSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKA 670

Query: 435 ERIKQAYQIFHNMSPRN--IITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            R+++AY+    +      +  W     G LL     QG Q  ++L+  +L
Sbjct: 671 GRVEEAYEFIEGLGEEGNFVAIW-----GSLLASCKAQGKQELAKLVTKKL 716


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 307/619 (49%), Gaps = 102/619 (16%)

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK------------GY--------- 252
           + K G +  V ++N L+ +Y   G  +DA  +F E              GY         
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 253 --------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP 304
                   V D +S+  ++ G   +GR E+A+  F DM+   + P++ T  +V+++C   
Sbjct: 61  HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120

Query: 305 ---RVGYQVHAQAMKSGFEAYTSVSNAAITMYS--------------------------- 334
               +G +VH+  +K G  A   V+N+ + MY+                           
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180

Query: 335 ----SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE-MQSVGIRPDE 389
               +CG++D A   F  L E+DIVSWN+MI+   Q      A+  +   ++   ++PD 
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240

Query: 390 FTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKN------------ 434
           F+  S L++   +E +   + IH ++       +  V NALIS YAK+            
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300

Query: 435 ---------------------ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
                                  I  A QIF+++   +++ W  +I G++ NG     ++
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360

Query: 474 HFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYA 533
            F  ++    RP+ +TL+  LS+ + ++SL HGKQIH   +++      S+GNA+ T+YA
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420

Query: 534 KCGDLDCSLRVFNMMIE-KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           K G ++ + +VFN++ + +DT+SW ++I A AQHG G+EA+  F+ M  +G IKPD  T+
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG-IKPDHITY 479

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
             VLSAC+H GLV+ G   FD M N +   P   H +CM+DL GRAG L EA + + +  
Sbjct: 480 VGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMP 539

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
           ++     W +L S+C  + N+ L ++ A  LL  E +    Y  L+N+Y++ G W++AA 
Sbjct: 540 MEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAK 599

Query: 713 IRELLKRTGVIKQPGCSWI 731
           IR+L+K  GV K+ G SW+
Sbjct: 600 IRKLMKARGVKKEQGLSWV 618



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 236/471 (50%), Gaps = 49/471 (10%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G ++DA+ +FV +    K+ P  ++L+  LA+CA   +   G ++H++ ++ GL A   V
Sbjct: 86  GRFEDAIKIFVDM-VKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPV 144

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           AN++L++Y    DL   K VF  ++  +  SW   +S     G VD A   F+ + +RD+
Sbjct: 145 ANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDI 204

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
             +N+MI GC ++G+++  +  F  + K   ++ D +S AS LS C +   L FG+Q+H 
Sbjct: 205 VSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHG 264

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA--------------KGYV----- 253
            + ++ F    +V NALI+MY   G V  A ++ E++               GYV     
Sbjct: 265 YIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDI 324

Query: 254 ------------CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA- 300
                        D +++  M+ G    G   +A+  F+ M+    RP+  T  +++SA 
Sbjct: 325 TPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSAS 384

Query: 301 --CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSW 357
                   G Q+HA A++SG     SV NA  TMY+  G I+ A  +F  L Q +D VSW
Sbjct: 385 SSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSW 444

Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            +MI   AQ  LG  AI  + +M ++GI+PD  T+  +L++     +VE   ++     +
Sbjct: 445 TSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYF---DL 501

Query: 418 ITNIQVSNALISAYA-------KNERIKQAYQIFHNMS-PRNIITWNTLIN 460
           + N+   +  +S YA       +   +++AY+   NM    ++I W +L++
Sbjct: 502 MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 168/678 (24%), Positives = 297/678 (43%), Gaps = 112/678 (16%)

Query: 84  LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           ++ GL    ++ N +++LY      +    +F+E+     +SW T LS   K G ++ A 
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-G 202
           +VFD +P RD   +  +I G  + G  +  I +F +M K  V    ++  +VL+ C A G
Sbjct: 62  QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
               G+++HS V K G    V V N+L+ MY   G++  A  VF+  K  + +  S+N M
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMK--LRNTSSWNAM 179

Query: 263 MDGLASVGRVEEALIRF-----RDMLV---------------------------ASLRPS 290
           +    + GRV+ AL +F     RD++                             SL+P 
Sbjct: 180 ISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPD 239

Query: 291 ELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID------- 340
             +  S +SAC        G Q+H   +++ F+A  +V NA I+MY+  G ++       
Sbjct: 240 RFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIE 299

Query: 341 --------------------------EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
                                      A  IF  L++ D+V+W  MI  Y Q  L   AI
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAI 359

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAY 431
             +  M S G RP+ FT  ++L++S  +  +   + IHA    +G   +  V NAL + Y
Sbjct: 360 EVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMY 419

Query: 432 AKNERIKQAYQIFHNMSP-RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
           AK   I  A ++F+ +   R+ ++W ++I     +G   + ++ F ++L   ++PD  T 
Sbjct: 420 AKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITY 479

Query: 491 SVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLR-VFNM 547
              LS+C     +  G+     ++KN   +   +S    M+ L+ + G L  + + V NM
Sbjct: 480 VGVLSACTHGGLVEQGRSYFD-LMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENM 538

Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA-TFTAVLSACSHAGLVD 606
            +E D I+W +L+S+   +   K       A + +  I+P+ +  ++A+ +  S  G  D
Sbjct: 539 PMEPDVIAWGSLLSSCKVY---KNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595

Query: 607 DGTRIFDSM------------------------VNDYGFIPAEDHLSCMLDL----LGRA 638
           D  +I   M                        V D G  P +D +  M+D     + + 
Sbjct: 596 DAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVED-GLHPQKDEIYKMMDKIWKEIKKM 654

Query: 639 GYLDEAERVINSQHIQAR 656
           G+  + E V++   ++ +
Sbjct: 655 GFAPDTESVLHDLEVEVK 672



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 196/380 (51%), Gaps = 12/380 (3%)

Query: 5   RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTL 64
           R+   +A     S+  ++  N  +A  ++ G   +AL  F  I     LKPD +SL++ L
Sbjct: 188 RVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASAL 247

Query: 65  AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE--IQNPD 122
           +ACANL   +FG Q+H Y +R    A   V N ++S+Y  +  +   +R+  +  I + D
Sbjct: 248 SACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLD 307

Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
           V ++T  L+   K+G +  A ++F+ + D D+  + AMI G  +NG  +  I +F+ M  
Sbjct: 308 VIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVS 367

Query: 183 LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
              R ++++ A++LS   +   L  G+Q+H+   +SG +   SV NAL TMY   G++  
Sbjct: 368 EGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSING 427

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           A KVF   +    D +S+  M+  LA  G  EEA+  F  ML   ++P  +T+V V+SAC
Sbjct: 428 ARKVFNLLRQNR-DTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSAC 486

Query: 302 LCPRVGYQVHA--QAMKSGFEAYTSVSNAA--ITMYSSCGKIDEACMIFARL-QEKDIVS 356
               +  Q  +    MK+  +   ++S+ A  + ++   G + EA      +  E D+++
Sbjct: 487 THGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIA 546

Query: 357 WNTMIST---YAQRNLGRSA 373
           W +++S+   Y   +L + A
Sbjct: 547 WGSLLSSCKVYKNVDLAKVA 566


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 189/594 (31%), Positives = 311/594 (52%), Gaps = 20/594 (3%)

Query: 149 MPDRDLPVYNAMITGCTENG-YEDIG---IGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           MP+RD+  +N++++    NG + D     + + R    L+V     S  SV+  C     
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVA----SLVSVVPACGTEQE 56

Query: 205 E-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           E FG  +H+L  K G + +V++ NAL+ MY   G+V  + +VF+       + +S+N  +
Sbjct: 57  EKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGM--LEQNEVSWNSAI 114

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
               + G   + L  FR M   ++ P  +T  S++ A +      +G +VH  ++K   +
Sbjct: 115 GCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMD 174

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V+N+ + MY+  G +++A  IF +++++++VSWN MI+   Q      A     +M
Sbjct: 175 LDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDM 234

Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
           Q  G  P+  T  ++L   A    ++M + IHA+    G++ ++ +SNALI  Y+K  ++
Sbjct: 235 QKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQL 294

Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
             A  IF   S ++ +++NTLI G+  + +  + L  F ++    +  D  +   ALS+C
Sbjct: 295 SLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSAC 353

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
             +S  +HGK+IH  +++  L     L N+++ LY K G L  + ++FN + +KD  SWN
Sbjct: 354 TNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWN 413

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            +I  Y  HG+   A   F+ M+  G +  D  ++ AVL+ACSH GLVD G + F  MV 
Sbjct: 414 TMILGYGMHGQIDIAFELFELMKGDG-LDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA 472

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
                P + H +CM+DLLGRAG L +   +I      A SD W AL  AC  HGN+ L +
Sbjct: 473 Q-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQ 531

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
             A  L E + +    Y L+ N+YA  G W EA  IR+L+K   V K P  SW+
Sbjct: 532 WAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 585



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 151/589 (25%), Positives = 282/589 (47%), Gaps = 51/589 (8%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +G + DA    V +  S     ++ SL + + AC   +   FG  +HA A++ GL    +
Sbjct: 19  NGMFHDARRALVSMMRS-GFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVN 77

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           +AN ++ +Y                                K G V+ + +VFD M +++
Sbjct: 78  LANALVDMY-------------------------------GKFGDVEASMQVFDGMLEQN 106

Query: 154 LPVYNAMITGCTENG--YEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQL 210
              +N+ I GC  N   Y D+ + +FR+M + +V   + + +S+L ++ + G  + GR++
Sbjct: 107 EVSWNSAI-GCFLNAGFYGDV-LRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREV 164

Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           H    K      + V N+L+ MY   G++  A  +FE+ K    + +S+N M+  L   G
Sbjct: 165 HGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR--NVVSWNAMIANLVQNG 222

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSN 327
              EA     DM  +   P+ +T V+V+ AC      ++G Q+HA +++ G      +SN
Sbjct: 223 AETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISN 282

Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
           A I MYS CG++  A  IF R  EKD VS+NT+I  Y+Q      ++L + +M+SVGI  
Sbjct: 283 ALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDY 341

Query: 388 DEFTF-GSLLASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
           D  +F G+L A +     +  + IH  +    +  +  +SN+L+  Y K   +  A +IF
Sbjct: 342 DAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIF 401

Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
           + ++ +++ +WNT+I G+ ++G      + F  +    L  D  +    L++C+    + 
Sbjct: 402 NKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVD 461

Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAY 563
            GK+    ++  N+  +      M+ L  + G L  C+  + +M    ++  W AL+ A 
Sbjct: 462 KGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGAC 521

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQAT-FTAVLSACSHAGLVDDGTRI 611
             HG  + A     A + +  +KP+ +  +T +++  +  G  ++  +I
Sbjct: 522 RIHGNIELAQW---AAEHLFELKPEHSGYYTLMINMYAETGRWNEANKI 567



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 129/278 (46%), Gaps = 36/278 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +ANL ++G   +A  L   +  S +  P+  +L   L ACA + +   G Q+HA+++
Sbjct: 212 NAMIANLVQNGAETEAFRLVTDMQKSGEC-PNSITLVNVLPACARMASLKMGKQIHAWSI 270

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R GL     ++N ++ +Y                               +K G +  A  
Sbjct: 271 RRGLMFDLFISNALIDMY-------------------------------SKCGQLSLARN 299

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
           +F++  ++D   YN +I G +++ +    + LF++M  + +  D  SF   LS C +  +
Sbjct: 300 IFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSV 358

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
            + G+++H ++ +   S    + N+L+ +Y   G +V A K+F +      D  S+N M+
Sbjct: 359 FKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKK--DVASWNTMI 416

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            G    G+++ A   F  M    L    +++++V++AC
Sbjct: 417 LGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAAC 454


>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 217/741 (29%), Positives = 370/741 (49%), Gaps = 96/741 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++ L RSG  ++A+ +F+++        +I + ++ ++A A     A   +L     
Sbjct: 19  NLRISQLGRSGRIEEAVAVFLKMTER-----NIVTYNSMISAYAKNGRIANARELFDLMP 73

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  L ++    N++++ Y +   +    R+F  +   D+YSWT  ++  T++G ++ A E
Sbjct: 74  QRNLVSW----NSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARE 129

Query: 145 VFDKMPDR-DLPVYNAMITGCTENGYEDIGIGLFREMHKL---DVRRDNYSFASVLS-VC 199
           +F+ +PD+ D    NA+I G  +         LFRE  KL    + ++  S+ S+LS   
Sbjct: 130 LFNLLPDKQDTVCRNALIAGYAKKR-------LFREAKKLFDEMLVKNVVSWNSILSGYT 182

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G ++ G Q    + +      V   N ++  Y   G++  A   F++      + +S+
Sbjct: 183 KNGKMQLGLQFFEAMGERN----VVSWNLMVDGYVGVGDLDSAWMFFKKIP--TPNVVSW 236

Query: 260 NVMMDGLASVGRVEEA-----------LIRFRDMLVASLRPSEL---------------- 292
             M+ G A  GR+ EA           L+ +  M+ A +R +++                
Sbjct: 237 VTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSV 296

Query: 293 TFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS--NAAITMYSSCGKIDEACMIFARLQ 350
           ++ ++++  +  RVG  + A+ + +    Y +++   A I  Y   G++DEA  IF+++ 
Sbjct: 297 SWTAMINGYV--RVGKLLQAREILN-LMPYKNIAAQTAMINGYLQSGRMDEANEIFSQIS 353

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHA 410
            +D V WN+MI+ YA    GR+               DE       A   F EMV     
Sbjct: 354 VRDSVCWNSMITGYAH--CGRT---------------DE-------ALRLFQEMV----- 384

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
                    ++   N +I+AYA+  ++ +A ++F+ M  RN+++WN+LI G++ NG   +
Sbjct: 385 -------CKDMVSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFE 437

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L  F  +     +PD+ T+   L + A +++L  G Q+H   +K    + + + NA++T
Sbjct: 438 ALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILT 497

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +YAK G +  +  VF  +  KD +SWN+LI+ YA +G GKEAV  F+ M   G I PD+ 
Sbjct: 498 MYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG-IIPDEV 556

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TFT +LSAC+H G VD G  +F SM   Y   P  +H +C+++LLGR G L+EA  ++  
Sbjct: 557 TFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQG 616

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
               + +  W AL  AC  H NL L +  A  LL  E    S YVLLSN++A AG W+  
Sbjct: 617 MKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMV 676

Query: 711 ANIRELLKRTGVIKQPGCSWI 731
             +R L+K     KQPGCSWI
Sbjct: 677 ERVRVLMKENKAEKQPGCSWI 697



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/469 (22%), Positives = 197/469 (42%), Gaps = 97/469 (20%)

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA--------------- 365
           +Y    N  I+     G+I+EA  +F ++ E++IV++N+MIS YA               
Sbjct: 13  SYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLM 72

Query: 366 -QRNL--GRSAILAYLEMQSVG---------IRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
            QRNL    S I  YL  + V           + D +++  ++     I  +E       
Sbjct: 73  PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFN 132

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQ 473
           +     +    NALI+ YAK    ++A ++F  M  +N+++WN++++G+  NG    GLQ
Sbjct: 133 LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQ 192

Query: 474 HFSEL---------LMSE------------------LRPDEYTLSVALSSCARISSLRHG 506
            F  +         LM +                    P+  +    LS  A    +   
Sbjct: 193 FFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEA 252

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           + +   +   NL+S     NAMI  Y +   +D + ++F  M EKD++SW A+I+ Y + 
Sbjct: 253 RNLFNEMPTKNLVS----WNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRV 308

Query: 567 GEGKEAVSCFKAMQ---------------DVGRIKP-----------DQATFTAVLSACS 600
           G+  +A      M                  GR+             D   + ++++  +
Sbjct: 309 GKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYA 368

Query: 601 HAGLVDDGTRIFDSMVNDYGFIPAEDHLS--CMLDLLGRAGYLDEAERVINSQHIQARS- 657
           H G  D+  R+F  MV        +D +S   M+    +AG +D+A  + N   +Q R+ 
Sbjct: 369 HCGRTDEALRLFQEMV-------CKDMVSWNTMIAAYAQAGQMDKALEMFN--EMQERNV 419

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            +W +L +    +G L    +   +L++++ +KP    ++  + A+A L
Sbjct: 420 VSWNSLITGYVQNG-LYFEALNCFILMKQQGEKPDQTTIVCCLRASANL 467


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 184/593 (31%), Positives = 294/593 (49%), Gaps = 86/593 (14%)

Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
            C VS   +L+  Y     +  A   F+       D + +N ++   A       A+  F
Sbjct: 86  PCPVSA-TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVF 144

Query: 280 RDMLVA-SLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
           R +L + SLRP + +F +++SA      +  R   Q+H   +KSG     SV NA + +Y
Sbjct: 145 RSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALY 204

Query: 334 SSC----------------------------------GKIDEACMIFARLQEKDIVSWNT 359
             C                                  G +  A  +F  +  K  V WN 
Sbjct: 205 MKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNA 264

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIIT 419
           MIS Y    +   A   +  M    +  DEFTF S+L++   + +     +   ++G I 
Sbjct: 265 MISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKS---VHGQII 321

Query: 420 NIQ----------VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT------------ 457
            +Q          V+NAL++ Y+K   I  A +IF NM+ +++++WNT            
Sbjct: 322 RLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLD 381

Query: 458 -------------------LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
                              +++G++  GF    L+ F+++    ++P +YT + A+++C 
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACG 441

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + +L+HGKQ+HG++++       S GNA+IT+YA+CG +  +  +F +M   D++SWNA
Sbjct: 442 ELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNA 501

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +ISA  QHG G+EA+  F  M   G I PD+ +F  VL+AC+H+GLVD+G R F+SM  D
Sbjct: 502 MISALGQHGHGREALELFDRMVAEG-IYPDRISFLTVLTACNHSGLVDEGFRYFESMKRD 560

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
           +G IP EDH + ++DLLGRAG + EA  +I +   +     W A+ S C   G++ LG  
Sbjct: 561 FGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAH 620

Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            A  L +        Y+LLSN Y+AAG W +AA +R+L++  GV K+PGCSWI
Sbjct: 621 AADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWI 673



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/494 (29%), Positives = 226/494 (45%), Gaps = 57/494 (11%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN--QLHAY 82
           N  ++  +R+ H   A+ +F  + +S  L+PD YS +  L+A  +L N +  +  QLH  
Sbjct: 125 NAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCS 184

Query: 83  ALRAGLKAYPHVANTILSLY---KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
            L++G      V N +++LY   ++       ++V  E+ N D  +WTT +    + G V
Sbjct: 185 VLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDV 244

Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
             A  VF+++  +   V+NAMI+G   +G       LFR M    V  D ++F SVLS C
Sbjct: 245 GAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSAC 304

Query: 200 -DAGLLEFGRQLHSLVTK--SGF--SCLVSVVNALITMYFNCGNVVDACKVFEEA----- 249
            + GL   G+ +H  + +    F     + V NAL+T Y  CGN+  A ++F+       
Sbjct: 305 ANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDV 364

Query: 250 -------KGYV---C--------------DHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
                   GYV   C              + +S+ VM+ G    G  E+AL  F  M   
Sbjct: 365 VSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSE 424

Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           +++P + T+   ++AC      + G Q+H   ++ GFE   S  NA ITMY+ CG + EA
Sbjct: 425 NVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEA 484

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---- 398
            ++F  +   D VSWN MIS   Q   GR A+  +  M + GI PD  +F ++L +    
Sbjct: 485 HLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHS 544

Query: 399 ----SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS--PRNI 452
                GF     M   F    GII        LI    +  RI +A  +   M   P   
Sbjct: 545 GLVDEGFRYFESMKRDF----GIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPS 600

Query: 453 ITWNTLINGFLLNG 466
           I W  +++G   +G
Sbjct: 601 I-WEAILSGCRTSG 613



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 146/578 (25%), Positives = 243/578 (42%), Gaps = 94/578 (16%)

Query: 79  LHAYALRAGL---KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
           LHA  L + L     +PH+   ++ LY  +RDL +   +F    +P   S T+ ++A   
Sbjct: 43  LHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLFC--ADPCPVSATSLVAAYAA 100

Query: 136 MGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSF 192
              +  A   FD +P   RD  ++NA+I+      +    + +FR  +    +R D+YSF
Sbjct: 101 ADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSF 160

Query: 193 ASVLSVCDAGLL-----EFGRQLHSLVTKSGFSCLVSVVNALITMYFNC----------- 236
            ++LS    G L         QLH  V KSG    +SV NAL+ +Y  C           
Sbjct: 161 TALLSA--GGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARK 218

Query: 237 -----------------------GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
                                  G+V  A  VFEE  G     + +N M+ G    G   
Sbjct: 219 VLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKF--DVVWNAMISGYVHSGMAV 276

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK--SGF--EAYTSVS 326
           EA   FR M++  +   E TF SV+SAC    +   G  VH Q ++    F  EA   V+
Sbjct: 277 EAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVN 336

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNT--------------------------- 359
           NA +T YS CG I  A  IF  +  KD+VSWNT                           
Sbjct: 337 NALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNEL 396

Query: 360 ----MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFV 412
               M+S Y        A+  + +M+S  ++P ++T+   +A+ G +  +   + +H  +
Sbjct: 397 SWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHI 456

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
              G   +    NALI+ YA+   +K+A+ +F  M   + ++WN +I+    +G   + L
Sbjct: 457 VQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREAL 516

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITL 531
           + F  ++   + PD  +    L++C     +  G +    + ++  +I        +I L
Sbjct: 517 ELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDL 576

Query: 532 YAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGE 568
             + G +  +  +   M  + T S W A++S     G+
Sbjct: 577 LGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGD 614



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 11/106 (10%)

Query: 507 KQIHGYVLKNNLISKMSL---------GNAMITLYAKCGDLDCSLRVFNMM--IEKDTIS 555
           + IH Y L  +L +  +L           +++  YA    L  ++  F+ +    +DT+ 
Sbjct: 64  RLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVL 123

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
            NA+ISAYA+      AV+ F+++   G ++PD  +FTA+LSA  H
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGH 169


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 196/690 (28%), Positives = 347/690 (50%), Gaps = 48/690 (6%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFG----NQLHAYALRAGLKAYPHVANTILSLYKNARDL 108
            +P+     T+L + A+L++        N + A  ++ G       +N  +  +    +L
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 109 VSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENG 168
              +++F ++ + +  S    +S   K G++  A ++FD M +R    +  +I G ++  
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN 123

Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT---KSGFSCLVSV 225
                  LF +M +     D  +F ++LS C+    E G Q+  + T   K G+   + V
Sbjct: 124 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGH--EMGNQITQVQTQIIKLGYDSRLIV 181

Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
            N L+  Y     +  AC++F+E              M  + S          F  +L A
Sbjct: 182 GNTLVDSYCKSNRLDLACQLFKE--------------MPEIDS--------FTFAAVLCA 219

Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
           ++   ++             +G Q+H+  +K+ F     VSNA +  YS    + +A  +
Sbjct: 220 NIGLDDIV------------LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKL 267

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI--- 402
           F  + E+D VS+N +IS YA     + A   + E+Q       +F F ++L+ +      
Sbjct: 268 FDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDW 327

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           EM   IHA   +    + I V N+L+  YAK  + ++A  IF N++ R+ + W  +I+ +
Sbjct: 328 EMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAY 387

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           +  GF  +GLQ F+++  + +  D+ T +  L + A I+SL  GKQ+H +++K+  +S +
Sbjct: 388 VQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNV 447

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
             G+A++ +YAKCG +  +++ F  M +++ +SWNA+ISAYAQ+GE +  +  FK M   
Sbjct: 448 FSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLS 507

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLD 642
           G ++PD  +F  VLSACSH+GLV++G   F+SM   Y   P  +H + ++D+L R+G  +
Sbjct: 508 G-LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFN 566

Query: 643 EAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSNIY 701
           EAE+++    I      W ++ +AC  H N  L R  A  L   E+ + +  YV +SNIY
Sbjct: 567 EAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIY 626

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           AAAG WE  + + + ++  GV K P  SW+
Sbjct: 627 AAAGQWENVSKVHKAMRDRGVKKLPAYSWV 656



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 163/361 (45%), Gaps = 42/361 (11%)

Query: 52  KLKPDIYSLSTTLAACAN--LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
           K  P+I S +     CAN  L +   G Q+H++ ++        V+N +L  Y     ++
Sbjct: 203 KEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 262

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
             +++F                               D+MP++D   YN +I+G   +G 
Sbjct: 263 DARKLF-------------------------------DEMPEQDGVSYNVIISGYAWDGK 291

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNA 228
                 LFRE+      R  + FA++LS+    L  E GRQ+H+    +     + V N+
Sbjct: 292 HKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNS 351

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           L+ MY  CG   +A  +F          + +  M+      G  EE L  F  M  AS+ 
Sbjct: 352 LVDMYAKCGKFEEAEMIFTNLTHRSA--VPWTAMISAYVQKGFYEEGLQLFNKMRQASVI 409

Query: 289 PSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
             + TF S++ A        +G Q+H+  +KSGF +     +A + +Y+ CG I +A   
Sbjct: 410 ADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQT 469

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI 402
           F  + +++IVSWN MIS YAQ     + + ++ EM   G++PD  +F  +L++   SG +
Sbjct: 470 FQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLV 529

Query: 403 E 403
           E
Sbjct: 530 E 530



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 89/410 (21%), Positives = 177/410 (43%), Gaps = 59/410 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N+ ++  +  G ++ A  LF ++  +       +  +T L+  +N  +   G Q+HA  +
Sbjct: 280 NVIISGYAWDGKHKYAFDLFRELQFT-AFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 338

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
                +   V N+++ +Y         + +F+ + +     WT  +SA  + G       
Sbjct: 339 VTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGF------ 392

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
                                   YE+ G+ LF +M +  V  D  +FAS+L    +   
Sbjct: 393 ------------------------YEE-GLQLFNKMRQASVIADQATFASLLRASASIAS 427

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+QLHS + KSGF   V   +AL+ +Y  CG++ DA + F+E      + +S+N M+
Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR--NIVSWNAMI 485

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
              A  G  E  L  F++M+++ L+P  ++F+ V+SAC         H+  ++ G   + 
Sbjct: 486 SAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSAC--------SHSGLVEEGLWHFN 537

Query: 324 SVSN------------AAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMIST---YAQR 367
           S++             + + M    G+ +EA  + A +  + D + W+++++    +  +
Sbjct: 538 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQ 597

Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGI 417
            L R A      M+ +          ++ A++G  E V  +H  +   G+
Sbjct: 598 ELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647


>gi|297721495|ref|NP_001173110.1| Os02g0670700 [Oryza sativa Japonica Group]
 gi|50251347|dbj|BAD28323.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|255671158|dbj|BAH91839.1| Os02g0670700 [Oryza sativa Japonica Group]
          Length = 687

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 207/710 (29%), Positives = 352/710 (49%), Gaps = 47/710 (6%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           R+G+ ++ + L+ ++   H++  D  +++  L +C  L N   G  +H  +L+ GL    
Sbjct: 6   RAGYPEEVIILYKRL-KLHQIGLDGKTITFVLKSCTELENLYLGKGMHVDSLKFGLSGDK 64

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            + ++++ LY     +   + VF EI + DV ++T+ ++                     
Sbjct: 65  FIGSSLIVLYSKLHRMDDSQGVFKEIIDKDVVAYTSMITG-------------------- 104

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
               Y+ ++     N + DI I + +    L+V R   +  S+L +  + G L+ G+ LH
Sbjct: 105 ----YSEIVDSVAWNAF-DIAIDMLQG--NLEVNR--VTMISLLQIAGNLGALKEGKSLH 155

Query: 212 SLVTKSGFSCLVSVVNA-LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
               +        ++   ++ +Y  CG    A    + +KG      S+N M+ GL   G
Sbjct: 156 CYSIRRALVVSDYILETCIVNLYTRCGAYQSAVATLQNSKGTAA---SWNAMLSGLTRAG 212

Query: 271 RVEEALIRFRDMLVA-SLRPSELTFVSVMSACL-CPRVGY--QVHAQAMKSGFEAYTSVS 326
           +  +A+     ML    + P  +TF +V+SAC+     GY   +H   ++        ++
Sbjct: 213 QSFDAIHYLSVMLHEHKITPDSVTFANVISACVEVCYFGYAASIHTYLIRRYIPLDVVLA 272

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            A + +YS C KI  +  +F +L  KD VS+N M+  Y    +   A      M + GI 
Sbjct: 273 TALVKVYSKCKKITISRHLFNQLIVKDAVSYNAMMYGYLHNGMANEATSLLNYMMAEGIV 332

Query: 387 PDEFTFGSLLASSGFIEMVEM-----IHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
           PD  T  SLLA+  F +  ++     IH F   +G  ++  V N ++  Y+   +   A 
Sbjct: 333 PDFATVLSLLAA--FADQRDLVRGRWIHGFGIRHGFCSDGDVENHILYMYSVCGKPAAAR 390

Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
            IF  +  +++++W  ++ G L  G   + +Q F  +     +PD  +L  A+ + + + 
Sbjct: 391 VIFDLLEQKSLVSWTAMMKGCLPYGHGDEVVQLFHLMQKHGEKPDSMSLVTAVQAVSELG 450

Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
            L   KQIH +V ++ L       N++I+ YAKCG LD S+ +F  +  ++  +WNA+IS
Sbjct: 451 HLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIIS 510

Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
           AYA HG     +  FK M++   I+PD+ TF+ VL+ACSHAGLV DG R+F+SM + Y  
Sbjct: 511 AYAMHGFYINMLEMFKQMEE-ENIQPDELTFSTVLTACSHAGLVKDGWRMFNSMTSVYSV 569

Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
           +P E+H  CM+DLLGRAG+L++  + I    ++ +S  +  L SAC  H N +L   I+ 
Sbjct: 570 LPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCVLISACRTHRNTQLALAISK 629

Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            LLE    KP +Y L+S +YA  G W E  N R     +G+ K PG S+I
Sbjct: 630 ELLEHGPQKPGIYALISEVYAQEGQWNEFTNTRARANLSGLKKHPGSSFI 679



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 168/393 (42%), Gaps = 51/393 (12%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  L+ L+R+G   DA+H    +   HK+ PD  + +  ++AC  +    +   +H Y +
Sbjct: 202 NAMLSGLTRAGQSFDAIHYLSVMLHEHKITPDSVTFANVISACVEVCYFGYAASIHTYLI 261

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           R  +     +A  ++ +Y   + +   + +F+++   D  S                   
Sbjct: 262 RRYIPLDVVLATALVKVYSKCKKITISRHLFNQLIVKDAVS------------------- 302

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV----CD 200
                       YNAM+ G   NG  +    L   M    +  D   FA+VLS+     D
Sbjct: 303 ------------YNAMMYGYLHNGMANEATSLLNYMMAEGIVPD---FATVLSLLAAFAD 347

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHIS 258
              L  GR +H    + GF     V N ++ MY  CG    A  +F+  E K  V    S
Sbjct: 348 QRDLVRGRWIHGFGIRHGFCSDGDVENHILYMYSVCGKPAAARVIFDLLEQKSLV----S 403

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY-----QVHAQ 313
           +  MM G    G  +E +  F  M     +P  ++ V+ + A     +G+     Q+H  
Sbjct: 404 WTAMMKGCLPYGHGDEVVQLFHLMQKHGEKPDSMSLVTAVQA--VSELGHLNGLKQIHCF 461

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
             +S  E     +N+ I+ Y+ CG++D +  +F  L+ +++ +WN +IS YA      + 
Sbjct: 462 VYRSLLEKDKITANSLISAYAKCGRLDLSVGLFFSLEYRNLDTWNAIISAYAMHGFYINM 521

Query: 374 ILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +  + +M+   I+PDE TF ++L +     +V+
Sbjct: 522 LEMFKQMEEENIQPDELTFSTVLTACSHAGLVK 554


>gi|297794367|ref|XP_002865068.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310903|gb|EFH41327.1| hypothetical protein ARALYDRAFT_920083 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 659

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 180/597 (30%), Positives = 304/597 (50%), Gaps = 35/597 (5%)

Query: 142 ACEVFDKMPDRDLPVYNAMITG--CTENGYEDIGIGLFREM-HKLDVRRDNYSFASVLSV 198
           A  +FD+MP RD+  + A+I G     N +E   + LF  +     V  D    +  L  
Sbjct: 39  ARHLFDQMPHRDIVSWTAIINGYVTAANSFE--ALNLFSALLFDPAVSPDTSVLSVALKA 96

Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
           C  +  + +G  LH+   K+     V V   L+ MY   G +   C++F E +    + +
Sbjct: 97  CGQSSNIGYGESLHAYAFKTSLLTSVFVGTNLLNMYMRTGKIDKGCRIFTEMQ--FRNTV 154

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQA 314
           ++  ++ G+   GR +E L  F +M  +     +  F + + AC   R    G ++H   
Sbjct: 155 TWTAIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKACARLRQVKYGKEIHTHV 214

Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
           +  G +A   V N+ I MY+ CG++ +   +F  + E+D+ SW T+I  Y+Q      A+
Sbjct: 215 IVRGSDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAV 274

Query: 375 LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             +L+++ +  R  ++T+  L  S                      + VSN+++  Y+  
Sbjct: 275 ATFLKIE-IFRRTSQWTYFCLGDS----------------------LSVSNSMMKMYSTC 311

Query: 435 ERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
            ++  A  +F  M  R+IITW+T+I G+   G   +    FS +  +  +P +  L+  L
Sbjct: 312 GKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLL 371

Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
           S    ++ L  G+Q+H   L   L    ++ +A+I +Y+KCG ++ + ++F      D +
Sbjct: 372 SVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           S  A+I+ YA+HG  KEA+  F+    VG ++PD  TF +VL+ACSH+G +D G R F+ 
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVG-LRPDTVTFISVLTACSHSGQLDLGFRYFNL 490

Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
           M ++Y   P ++H  CM+DLL RAG L +AE++IN    +     W  L +AC A G+  
Sbjct: 491 MQDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTE 550

Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            GR  A  +LE +    + +V L+NIY++ G  EEAA++R+ +K  GVIK PG S I
Sbjct: 551 RGRRAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAMKSKGVIKVPGWSSI 607



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/585 (25%), Positives = 268/585 (45%), Gaps = 68/585 (11%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +AL+LF  +     + PD   LS  L AC    N  +G  LHAYA +  L     V   +
Sbjct: 69  EALNLFSALLFDPAVSPDTSVLSVALKACGQSSNIGYGESLHAYAFKTSLLTSVFVGTNL 128

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           L++Y     +    R+F+E+Q  +  +WT                               
Sbjct: 129 LNMYMRTGKIDKGCRIFTEMQFRNTVTWT------------------------------- 157

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTK 216
           A+++G  E G    G+  F EM +     D+++FA+ L  C A L  +++G+++H+ V  
Sbjct: 158 AIVSGMVEAGRHKEGLTYFSEMSRSKGLSDDFAFATALKAC-ARLRQVKYGKEIHTHVIV 216

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
            G    + VVN+LI MY  CG + D   +FE       D  S+  ++D  + +G+ E+A+
Sbjct: 217 RGSDASLCVVNSLINMYTECGEMHDGVHLFESMSER--DVFSWTTLIDAYSQMGQEEKAV 274

Query: 277 IRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
             F  + +   R S+ T+      CL   +                 SVSN+ + MYS+C
Sbjct: 275 ATFLKIEIFR-RTSQWTYF-----CLGDSL-----------------SVSNSMMKMYSTC 311

Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
           GK+D A ++F  ++ +DI++W+T+I  Y+Q  LG    + +  M+  G +P +    SLL
Sbjct: 312 GKLDSASVLFQGMRRRDIITWSTIIGGYSQAGLGEEVFMCFSWMRQAGPKPTDPALASLL 371

Query: 397 ASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
           + SG + ++E    +HA     G+  N  + +ALI+ Y+K   I++A +IF      +I+
Sbjct: 372 SVSGTMAVLEQGRQVHALALYLGLEQNSTIRSALINMYSKCGSIEEASKIFEETDTDDIV 431

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +   +ING+  +G   + +  F + L   LRPD  T    L++C+    L  G +    +
Sbjct: 432 SLTAMINGYAEHGNTKEAIDLFEKSLKVGLRPDTVTFISVLTACSHSGQLDLGFRYFNLM 491

Query: 514 LKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI-EKDTISWNALISAYAQHGEGKE 571
               N+         M+ L  + G L  + ++ N M  +KD + W  L++A    G+ + 
Sbjct: 492 QDEYNIRPVKEHYGCMVDLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTER 551

Query: 572 AVSCFKAMQDVGRIKPDQAT-FTAVLSACSHAGLVDDGTRIFDSM 615
                +A + +  + P   T F  + +  S  G +++   +  +M
Sbjct: 552 GR---RAAERILELDPTSETAFVTLANIYSSTGKLEEAAHVRKAM 593



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/452 (23%), Positives = 195/452 (43%), Gaps = 73/452 (16%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           ++ +  +G +++ L  F ++  S  L  D ++ +T L ACA LR   +G ++H + +  G
Sbjct: 160 VSGMVEAGRHKEGLTYFSEMSRSKGLSDD-FAFATALKACARLRQVKYGKEIHTHVIVRG 218

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH--------- 138
             A   V N+++++Y    ++     +F  +   DV+SWTT + A ++MG          
Sbjct: 219 SDASLCVVNSLINMYTECGEMHDGVHLFESMSERDVFSWTTLIDAYSQMGQEEKAVATFL 278

Query: 139 -----------------------------------VDYACEVFDKMPDRDLPVYNAMITG 163
                                              +D A  +F  M  RD+  ++ +I G
Sbjct: 279 KIEIFRRTSQWTYFCLGDSLSVSNSMMKMYSTCGKLDSASVLFQGMRRRDIITWSTIIGG 338

Query: 164 CTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCL 222
            ++ G  +     F  M +   +  + + AS+LSV     +LE GRQ+H+L    G    
Sbjct: 339 YSQAGLGEEVFMCFSWMRQAGPKPTDPALASLLSVSGTMAVLEQGRQVHALALYLGLEQN 398

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
            ++ +ALI MY  CG++ +A K+FEE      D +S   M++G A  G  +EA+  F   
Sbjct: 399 STIRSALINMYSKCGSIEEASKIFEETD--TDDIVSLTAMINGYAEHGNTKEAIDLFEKS 456

Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNA------------AI 330
           L   LRP  +TF+SV++AC         H+  +  GF  +  + +              +
Sbjct: 457 LKVGLRPDTVTFISVLTAC--------SHSGQLDLGFRYFNLMQDEYNIRPVKEHYGCMV 508

Query: 331 TMYSSCGKIDEA-CMIFARLQEKDIVSWNTMISTYAQR---NLGRSAILAYLEMQSVGIR 386
            +    G++ +A  MI     +KD V W T+++    +     GR A    LE+      
Sbjct: 509 DLLCRAGRLSDAEKMINEMPWKKDDVVWTTLLNACKAKGDTERGRRAAERILELDPTS-E 567

Query: 387 PDEFTFGSLLASSGFIEMVEMIHAFVFINGII 418
               T  ++ +S+G +E    +   +   G+I
Sbjct: 568 TAFVTLANIYSSTGKLEEAAHVRKAMKSKGVI 599


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 190/619 (30%), Positives = 312/619 (50%), Gaps = 34/619 (5%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D+  W   +S+  + G  + A  VF +MP      YN MI+G   NG  ++   LF E
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120

Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNV 239
           M + D+   N      +   + G     R+L  ++ +      V   N +++ Y   G V
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGK---ARELFEIMPERD----VCSWNTMLSGYAQNGCV 173

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
            DA  VF+       + +S+N ++       ++EEA + F+         S   +  V  
Sbjct: 174 DDARSVFDRMPEK--NDVSWNALLSAYVQNSKMEEACMLFK---------SRENWALVSW 222

Query: 300 ACLCPRVGYQVHAQAMKSGFEAYTSVS-------NAAITMYSSCGKIDEACMIFARLQEK 352
            CL   +G  V  + +    + + S++       N  IT Y+  GKIDEA  +F     +
Sbjct: 223 NCL---LGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFV 412
           D+ +W  M+S Y Q  +   A   + +M       +E ++ ++LA     E +EM    +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGYVQGERMEMAKE-L 334

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           F      N+   N +I+ YA+  +I +A  +F  M  R+ ++W  +I G+  +G   + L
Sbjct: 335 FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEAL 394

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F ++     R +  + S ALS+CA + +L  GKQ+HG ++K    +   +GNA++ +Y
Sbjct: 395 RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMY 454

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            KCG ++ +  +F  M  KD +SWN +I+ Y++HG G+ A+  F++M+  G +KPD AT 
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPDDATM 513

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
            AVLSACSH GLVD G + F +M  DYG +P   H +CM+DLLGRAG L++A  ++ +  
Sbjct: 514 VAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573

Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
            +  +  W  L  A   HGN  L    A  +   E +   +YVLLSN+YA++G W +   
Sbjct: 574 FEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGK 633

Query: 713 IRELLKRTGVIKQPGCSWI 731
           +R  ++  GV K PG SWI
Sbjct: 634 LRVRMRDKGVKKVPGYSWI 652



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 158/618 (25%), Positives = 284/618 (45%), Gaps = 63/618 (10%)

Query: 4   RRITATIAGNSNTSKEL------LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDI 57
           +R T T    S T   L      + + N+++++  R+G   +AL +F       K  P  
Sbjct: 41  KRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVF-------KRMPRW 93

Query: 58  YSLSTTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
            S+S        LRN  F    +L        L ++    N ++  Y   R+L   + +F
Sbjct: 94  SSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSW----NVMIKGYVRNRNLGKARELF 149

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
             +   DV SW T LS   + G VD A  VFD+MP+++   +NA+++   +N   +    
Sbjct: 150 EIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACM 209

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL----VSVVNALIT 231
           LF+        R+N++  S     +  L  F ++   +  +  F  +    V   N +IT
Sbjct: 210 LFKS-------RENWALVS----WNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258

Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
            Y   G + +A ++F+E+   V D  ++  M+ G      VEEA    R++       +E
Sbjct: 259 GYAQSGKIDEARQLFDESP--VQDVFTWTAMVSGYIQNRMVEEA----RELFDKMPERNE 312

Query: 292 LTFVSVMSACLCPRVGYQVHAQAMKSGFEAY-------TSVSNAAITMYSSCGKIDEACM 344
           +++ ++++       GY V  + M+   E +        S  N  IT Y+ CGKI EA  
Sbjct: 313 VSWNAMLA-------GY-VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKN 364

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI-- 402
           +F ++ ++D VSW  MI+ Y+Q      A+  +++M+  G R +  +F S L++   +  
Sbjct: 365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVA 424

Query: 403 -EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
            E+ + +H  +   G  T   V NAL+  Y K   I++A  +F  M+ ++I++WNT+I G
Sbjct: 425 LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAG 484

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
           +  +GF    L+ F  +    L+PD+ T+   LS+C+    +  G+Q    + ++  +  
Sbjct: 485 YSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMP 544

Query: 522 MSLGNA-MITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            S   A M+ L  + G L+ +  +  NM  E D   W  L+ A   HG  + A +   A 
Sbjct: 545 NSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAET---AA 601

Query: 580 QDVGRIKPDQATFTAVLS 597
             +  ++P+ +    +LS
Sbjct: 602 DKIFAMEPENSGMYVLLS 619


>gi|302801247|ref|XP_002982380.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
 gi|300149972|gb|EFJ16625.1| hypothetical protein SELMODRAFT_447 [Selaginella moellendorffii]
          Length = 730

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 186/682 (27%), Positives = 344/682 (50%), Gaps = 72/682 (10%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A   ++GH ++A++LF ++     ++P+   + +TLAAC+  ++ A G  +HA  L   
Sbjct: 75  IAAYGQAGHCREAINLFQRM----DVEPNEMVIVSTLAACSGAKDLALGMAIHARILSPD 130

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L+    V   +L++Y     +   + VF ++ + DV SWT  ++A  +MG    A E  +
Sbjct: 131 LRKSVFVGTALLNMYAKCGAIEQARAVFDQMPHKDVVSWTAMITAFAQMGDCRQALETLE 190

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
            M                                +  V+ +  +F + ++ C +   L+ 
Sbjct: 191 GMI-------------------------------QARVQPNPVTFVAAITACSSREFLDR 219

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
           GR++H+ V   G    +++ NAL++MY    +  +A  VF+  +    + +S+N M+   
Sbjct: 220 GRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMEDR--NRVSWNSMIAAF 277

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-------LCPRVGYQVHAQAMKSGF 319
           A+  +   A+  F  M +  ++P +++F+ V+SAC        C R+  Q+   A+ S  
Sbjct: 278 AASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRIHSQLELAAVHSPP 337

Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
           +   SV N+ +T Y+ CG ++ A  IF R+  K++VSW  M++ Y     G  A+  Y +
Sbjct: 338 D--LSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHGNGSKALELYDK 395

Query: 380 MQSVGIRPDEFTF------GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
           M    I+PD          GSL+   G + +   +HA V  +  +  IQ+ NALI+ YA+
Sbjct: 396 MVGQSIQPDSVVLLNVIYAGSLV---GDVGLARKLHARVASSSFMLKIQIQNALINMYAR 452

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-------LMSELR-- 484
              +++A ++F  +  +N+++WN ++  ++ +G+  + +  FSE+       + S LR  
Sbjct: 453 CGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKAMESGLRSS 512

Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL------ISKMSLGNAMITLYAKCGDL 538
           PD     + L + A +  L  G+ IH  +   N        + ++LGNA++++YA+CG +
Sbjct: 513 PDCIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNALVSMYARCGSM 572

Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
             +   F+ M  +DT++W++L++ YA HG  + A+  ++ M   G ++PD  T+ ++L++
Sbjct: 573 GDASAAFHHMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEG-VQPDSVTYVSILNS 631

Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
           CSHAGL+      F SMV D+      DH  CM+D+LGRAG++  AE V+ +   Q    
Sbjct: 632 CSHAGLLAQARHFFVSMVEDHCLAAWPDHWKCMVDVLGRAGFVGRAEDVVRNMPFQPDVV 691

Query: 659 NWWALFSACAAHGNLRLGRIIA 680
            W  L   C  HG+ + G + A
Sbjct: 692 AWNTLLGCCKVHGDAQRGAVAA 713



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 173/681 (25%), Positives = 330/681 (48%), Gaps = 72/681 (10%)

Query: 61  STTLAACANLRNAAFGNQLHAYALRAG--LKAYPHVANTILSLYKN---ARDLVSVKRVF 115
           ++ L  C   R+ A G ++H + L  G  L++  H+ N ++ +Y+       L   + VF
Sbjct: 2   ASLLRRCGISRSLADGRRVHDHILATGHFLRSV-HLGNLLIQMYRKCGGTSSLADARAVF 60

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
            ++   DV SW+  ++A  + GH   A  +F +M                          
Sbjct: 61  DQMPKKDVVSWSCIIAAYGQAGHCREAINLFQRM-------------------------- 94

Query: 176 LFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
                   DV  +     S L+ C  A  L  G  +H+ +        V V  AL+ MY 
Sbjct: 95  --------DVEPNEMVIVSTLAACSGAKDLALGMAIHARILSPDLRKSVFVGTALLNMYA 146

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
            CG +  A  VF++      D +S+  M+   A +G   +AL     M+ A ++P+ +TF
Sbjct: 147 KCGAIEQARAVFDQMPHK--DVVSWTAMITAFAQMGDCRQALETLEGMIQARVQPNPVTF 204

Query: 295 VSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V+ ++AC        G ++HA  +  G     ++ NA ++MY+     +EA  +F R+++
Sbjct: 205 VAAITACSSREFLDRGRKIHAAVIDLGLHGDITIQNALVSMYAKGSSAEEALSVFQRMED 264

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMI 408
           ++ VSWN+MI+ +A      SA+  +  M   GI+PD+ +F  +L   +S+G +   + I
Sbjct: 265 RNRVSWNSMIAAFAASAQSCSAMGLFHGMNLEGIKPDDVSFLGVLSACSSTGCLRSCKRI 324

Query: 409 HAFVFINGIIT--NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
           H+ + +  + +  ++ V N+L++AYAK   ++ A +IF  +  +N+++W  ++  +  +G
Sbjct: 325 HSQLELAAVHSPPDLSVENSLVTAYAKCGDLEAAERIFQRIPGKNVVSWTAMLTAYTFHG 384

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
              + L+ + +++   ++PD   L   + + + +  +   +++H  V  ++ + K+ + N
Sbjct: 385 NGSKALELYDKMVGQSIQPDSVVLLNVIYAGSLVGDVGLARKLHARVASSSFMLKIQIQN 444

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF--------KA 578
           A+I +YA+CG L+ + RVF+ +  K+ +SWNA++ +Y QHG  +EA++ F        KA
Sbjct: 445 ALINMYARCGSLEEARRVFDGIERKNLVSWNAMMGSYVQHGYDEEAIALFSEMKTGNSKA 504

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGL--VDDGTRIFDSM--VNDYGFIPAEDHLS---CM 631
           M+   R  PD     AV+  C+HAGL  + +G  I   +  VN      +  +++    +
Sbjct: 505 MESGLRSSPD--CIMAVILLCAHAGLGKLAEGRCIHAELCAVNPEILAGSTTNVTLGNAL 562

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGNLRLGRII-AGLLLEREQD 689
           + +  R G + +A    +  H++AR    W +L +  A HG+     ++   + LE  Q 
Sbjct: 563 VSMYARCGSMGDASAAFH--HMRARDTVTWSSLVAGYAHHGHAEYAILLYRDMHLEGVQP 620

Query: 690 KPSVYVLLSNIYAAAGLWEEA 710
               YV + N  + AGL  +A
Sbjct: 621 DSVTYVSILNSCSHAGLLAQA 641


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  302 bits (774), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 169/485 (34%), Positives = 262/485 (54%), Gaps = 19/485 (3%)

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMK 316
           N ++  L   G +++A+     +L     P++ TF  ++ +C        G  VH + + 
Sbjct: 51  NQLIQSLCKGGNLKQAI----HLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVS 106

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SGF+    ++   I MY   G ID A  +F   +E+ I  WN +    A    G+  +  
Sbjct: 107 SGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDL 166

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMV-------EMIHAFVFINGIITNIQVSNALIS 429
           Y++M  +GI  D FT+  +L +    E+        + IHA +  +G   NI V   L+ 
Sbjct: 167 YVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLD 226

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR---PD 486
            YAK   +  A  +F  M  +N ++W+ +I  F  N  P++ L+ F +L+M E     P+
Sbjct: 227 VYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELF-QLMMLEAHDSVPN 285

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
             T+   L +CA +++L  GK IHGY+L+  L S + + NA+IT+Y +CG++    RVF+
Sbjct: 286 SVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFD 345

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            M  +D +SWN+LIS Y  HG GK+A+  F+ M   G   P   +F  VL ACSHAGLV+
Sbjct: 346 NMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGS-SPSYISFITVLGACSHAGLVE 404

Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
           +G  +F+SM++ Y   P  +H +CM+DLLGRA  LDEA ++I   H +     W +L  +
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
           C  H N+ L    + LL E E      YVLL++IYA A +W EA ++ +LL+  G+ K P
Sbjct: 465 CRIHCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLP 524

Query: 727 GCSWI 731
           GCSWI
Sbjct: 525 GCSWI 529



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 179/377 (47%), Gaps = 22/377 (5%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG---YVCDHISYNVMM 263
           G  +H  +  SGF     +   LI MY+  G++  A KVF+E +    YV     +N + 
Sbjct: 97  GLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYV-----WNALF 151

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-------GYQVHAQAMK 316
             LA VG  +E L  +  M    +     T+  V+ AC+   +       G ++HA  ++
Sbjct: 152 RALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILR 211

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
            G+EA   V    + +Y+  G +  A  +F  +  K+ VSW+ MI+ +A+  +   A+  
Sbjct: 212 HGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALEL 271

Query: 377 Y--LEMQSVGIRPDEFTFGSLL-ASSGF--IEMVEMIHAFVFINGIITNIQVSNALISAY 431
           +  + +++    P+  T  ++L A +G   +E  ++IH ++   G+ + + V NALI+ Y
Sbjct: 272 FQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMY 331

Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
            +   I    ++F NM  R++++WN+LI+ + ++GF  + +Q F  ++     P   +  
Sbjct: 332 GRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFI 391

Query: 492 VALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMI 549
             L +C+    +  GK +   +L K  +   M     M+ L  +   LD ++++  +M  
Sbjct: 392 TVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHF 451

Query: 550 EKDTISWNALISAYAQH 566
           E     W +L+ +   H
Sbjct: 452 EPGPTVWGSLLGSCRIH 468



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 175/394 (44%), Gaps = 52/394 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  + +L + G+ + A+HL        +  P   +    + +CA   + + G  +H   +
Sbjct: 51  NQLIQSLCKGGNLKQAIHLLCC-----EPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLV 105

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
            +G    P +A  ++++Y                                ++G +D A +
Sbjct: 106 SSGFDQDPFLATKLINMY-------------------------------YELGSIDRARK 134

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----- 199
           VFD+  +R + V+NA+       G     + L+ +M+ + +  D +++  VL  C     
Sbjct: 135 VFDETRERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSEL 194

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF--EEAKGYVCDHI 257
               L+ G+++H+ + + G+   + V+  L+ +Y   G+V  A  VF     K +V    
Sbjct: 195 SVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFV---- 250

Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLR--PSELTFVSVMSAC---LCPRVGYQVHA 312
           S++ M+   A      +AL  F+ M++ +    P+ +T V+V+ AC        G  +H 
Sbjct: 251 SWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHG 310

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             ++ G ++   V NA ITMY  CG+I     +F  ++ +D+VSWN++IS Y     G+ 
Sbjct: 311 YILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKK 370

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           AI  +  M   G  P   +F ++L +     +VE
Sbjct: 371 AIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 40  ALHLF-VQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           AL LF + +  +H   P+  ++   L ACA L     G  +H Y LR GL +   V N +
Sbjct: 268 ALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNAL 327

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR-DLPVY 157
           +++Y    +++  +RVF  ++N DV SW + +S     G    A ++F+ M  +   P Y
Sbjct: 328 ITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSY 387

Query: 158 NAMIT---GCTENGYEDIGIGLFREM 180
            + IT    C+  G  + G  LF  M
Sbjct: 388 ISFITVLGACSHAGLVEEGKILFESM 413


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 174/532 (32%), Positives = 287/532 (53%), Gaps = 12/532 (2%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMMDGL 266
           +Q+H+ +  SG +    + N+L+  Y  CG + DA ++F       C ++ S+ +++ GL
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTP---CKNVVSWTILISGL 97

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           A      EA+  FR+M + + +P+ +T  SV+ A       R+   VH   ++ GFE   
Sbjct: 98  AKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNV 157

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V  A + MYS  G +  A  +F  + E+++VSWN ++S Y+       AI  +  M+  
Sbjct: 158 FVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRK 217

Query: 384 GIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+  D +T  SL+ +S   G +++   IH F+   G   +  +  AL+  Y  +  +  A
Sbjct: 218 GLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDA 277

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL-MSELRPDEYTLSVALSSCAR 499
           +++F  M  +++  W  ++ GF       + ++HF+++L +  L+ D   L   LSSC+ 
Sbjct: 278 HRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSH 337

Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNAL 559
             +L+ G+++H   +K    + + +G+A+I +YA CG+L+ + R F  M EKD + WNA+
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397

Query: 560 ISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY 619
           I+    +G G +A+  F  M+  G + PD++TF +VL ACSHAG+V +G +IF  MV   
Sbjct: 398 IAGNGMNGYGTDAIDLFLQMKGSG-LDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTS 456

Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRII 679
             IP   H +C++D+LGRAG LD A   IN+   Q   D +  L  AC  HGN++LG  I
Sbjct: 457 HDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEI 516

Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           +  + E E +    YVLLSN+YA AG WE     R  L+   + K PG S I
Sbjct: 517 SQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSI 568



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 236/481 (49%), Gaps = 46/481 (9%)

Query: 26  ISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALR 85
           I ++ L+++  + +A+ +F ++ +    KP+  ++S+ L A ANL        +H + +R
Sbjct: 92  ILISGLAKNDCFVEAIDVFREM-TMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVR 150

Query: 86  AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEV 145
            G +                        VF E    D+YS         K G +  A ++
Sbjct: 151 GGFEG----------------------NVFVETALVDMYS---------KFGCMGVARQL 179

Query: 146 FDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLL 204
           F+ M +R++  +NA+++G +++G+ +  I LF  M +  +  D Y+  S++      G L
Sbjct: 180 FESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCL 239

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
           + G  +H  + ++G+     +  AL+ +Y +   V DA +VF E   +V D  ++ +M+ 
Sbjct: 240 QVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM--FVKDVAAWTLMLT 297

Query: 265 GLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
           G +S    + A+  F  ML + +L+   +  + ++S+C      + G +VHA A+K+ F 
Sbjct: 298 GFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFA 357

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V +A I MY++CG +++A   F  + EKD+V WN MI+       G  AI  +L+M
Sbjct: 358 NNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQM 417

Query: 381 QSVGIRPDEFTFGSLL---ASSGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +  G+ PDE TF S+L   + +G + E +++ +  V  +  I N+Q    +I    +  +
Sbjct: 418 KGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQ 477

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  AY   +NM  + +   ++TL+    ++G    G +   ++   E+ P++    V LS
Sbjct: 478 LDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIF--EMEPNDAGYYVLLS 535

Query: 496 S 496
           +
Sbjct: 536 N 536



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 246/519 (47%), Gaps = 21/519 (4%)

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS-----ACTKMGHVDYACEVFDK 148
           +A +  S+ +  +DL  ++++ ++I    + +  TFLS     A    G +  A ++F  
Sbjct: 23  LAQSHASILRKLKDLKPLQQIHAQIITSGL-THNTFLSNSLMNAYVYCGLLADAKQIFHH 81

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFG 207
            P +++  +  +I+G  +N      I +FREM   + + +  + +SVL +  + GL+   
Sbjct: 82  TPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIA 141

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           + +H    + GF   V V  AL+ MY   G +  A ++FE       + +S+N ++ G +
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER--NVVSWNAIVSGYS 199

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS 324
             G  EEA+  F  M    L     T +S++ A L   C +VG  +H   +++G+E    
Sbjct: 200 DHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKH 259

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV- 383
           +  A + +Y S   +D+A  +F+ +  KD+ +W  M++ ++       AI  + +M  + 
Sbjct: 260 IKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQ 319

Query: 384 GIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
            ++ D      +L+S   SG ++    +HA         NI V +A+I  YA    ++ A
Sbjct: 320 NLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDA 379

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
            + F+ M  ++++ WN +I G  +NG+    +  F ++  S L PDE T    L +C+  
Sbjct: 380 KRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHA 439

Query: 501 SSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNA 558
             +  G QI  +++K +  I  +     +I +  + G LD +   + NM  + D   ++ 
Sbjct: 440 GMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYST 499

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           L+ A   HG  K      +  Q +  ++P+ A +  +LS
Sbjct: 500 LLGACRIHGNIKLG---HEISQKIFEMEPNDAGYYVLLS 535



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 137/261 (52%), Gaps = 2/261 (0%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
           S+L     ++ ++ IHA +  +G+  N  +SN+L++AY     +  A QIFH+   +N++
Sbjct: 29  SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVV 88

Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
           +W  LI+G   N   V+ +  F E+ M   +P+  T+S  L + A +  +R  K +H + 
Sbjct: 89  SWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148

Query: 514 LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
           ++      + +  A++ +Y+K G +  + ++F  M E++ +SWNA++S Y+ HG  +EA+
Sbjct: 149 VRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAI 208

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLD 633
             F  M+  G +  D  T  +++ A    G +  GT I   ++   G+   +   + ++D
Sbjct: 209 DLFNLMRRKGLL-VDFYTIMSLIPASLSVGCLQVGTGIHGFIIRT-GYENDKHIKTALMD 266

Query: 634 LLGRAGYLDEAERVINSQHIQ 654
           +      +D+A RV +   ++
Sbjct: 267 IYVSHNCVDDAHRVFSEMFVK 287



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  ++  N  ++  S  G  ++A+ LF  +     L  D Y++ + + A  ++     G
Sbjct: 184 SERNVVSWNAIVSGYSDHGFSEEAIDLF-NLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
             +H + +R G +   H+   ++ +Y +   +    RVFSE+   DV +WT  L+  +  
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSG 302

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
            H D A + F+KM                      +GI         +++ D+     +L
Sbjct: 303 RHWDRAIKHFNKM----------------------LGIQ--------NLKLDSIVLMGIL 332

Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYV 253
           S C  +G L+ GR++H+L  K+ F+  + V +A+I MY NCGN+ DA + F     K  V
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           C    +N M+ G    G   +A+  F  M  + L P E TFVSV+ AC
Sbjct: 393 C----WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 178/512 (34%), Positives = 263/512 (51%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  TF  ++ AC      R G Q+H   +
Sbjct: 71  WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--------------------------- 348
           K G +    V  + I MY   G+ ++A  +F +                           
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190

Query: 349 ----LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
               +  KD+VSWN +IS YA+    + A+  + EM    ++PDE T  ++L   A S  
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +N+++ NALI  Y K   ++ A  +F  +S +++I+WNTLI G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG 310

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
           +       + L  F E+L S   P+E T+   L +CA + ++  G+ IH Y+ K    + 
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVS 370

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VF+ M+ +   SWNA+I  +A HG    A   F  M
Sbjct: 371 NPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRM 430

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +  G I+PD  TF  +LSACSH+G++D G  IF SM  DY   P  +H  CM+DLLG +G
Sbjct: 431 RKDG-IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSG 489

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EAE +INS  +      W +L  AC  HGN+ LG   A  L++ E      YVLLSN
Sbjct: 490 LFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSN 549

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W E A  R LL   G+ K PGCS I
Sbjct: 550 IYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 225/440 (51%), Gaps = 18/440 (4%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL+L+V +  S  L P+ Y+    L ACA  +    G Q+H + L+ G     +V  +++
Sbjct: 87  ALYLYVCM-ISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLI 145

Query: 100 SLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
           ++Y KN R     ++VF +  + DV S+T  +      G++  A ++FD++P +D+  +N
Sbjct: 146 AMYVKNGR-XEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWN 204

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           A+I+G  E G     + LF+EM K +V+ D  +  +VLS C  +  +E GRQ+HS +   
Sbjct: 205 ALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDH 264

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
           GF   + +VNALI +Y  CG V  A  +FE       D IS+N ++ G   +   +EAL+
Sbjct: 265 GFGSNLKIVNALIDLYIKCGEVETASGLFEGLS--YKDVISWNTLIGGYTHMNLYKEALL 322

Query: 278 RFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITM 332
            F++ML +   P+E+T +S++ AC       +G  +H    K   G    +S+  + I M
Sbjct: 323 LFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDM 382

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG I+ A  +F  +  + + SWN MI  +A       A   +  M+  GI PD+ TF
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITF 442

Query: 393 GSLLASSGFIEMVEM-IHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMS 448
             LL++     M+++  H F  +     I   ++    +I     +   K+A ++ ++M 
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME 502

Query: 449 --PRNIITWNTLINGFLLNG 466
             P  +I W +L+    ++G
Sbjct: 503 MDPDGVI-WCSLLKACKMHG 521



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 38/347 (10%)

Query: 394 SLLASSGFIEMVEMIHAFVFINGII-TNIQVSNAL-ISAYAKN-ERIKQAYQIFHNMSPR 450
           SLL +   ++ + +IHA +   G+  TN  +S  +  S  + + + +  A  +F ++   
Sbjct: 7   SLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEP 66

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           N++ WNT+  G  L+  PV  L  +  ++   L P+ YT    L +CA+  + R G+QIH
Sbjct: 67  NLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIH 126

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN------------------------ 546
           G+VLK      + +  ++I +Y K G  + + +VF+                        
Sbjct: 127 GHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIX 186

Query: 547 ----MMIE---KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
               M  E   KD +SWNALIS YA+ G  KEA+  FK M     +KPD++T   VLSAC
Sbjct: 187 SAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKT-NVKPDESTMVTVLSAC 245

Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
           + +  ++ G ++  S ++D+GF      ++ ++DL  + G ++ A  +   + +  +   
Sbjct: 246 AQSASIELGRQVH-SWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLF--EGLSYKDVI 302

Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            W        H NL    ++    + R  + P+   +LS + A A L
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHL 349


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 200/641 (31%), Positives = 306/641 (47%), Gaps = 116/641 (18%)

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMY---FN--------------------------- 235
           F R +H+ +  SGF     ++N LI  Y   FN                           
Sbjct: 14  FARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAYS 73

Query: 236 -CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             GN+  A ++F      + D +SYN M+   +       AL  F  M      P   TF
Sbjct: 74  AAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFTF 133

Query: 295 VSVMSAC--LCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSC-------------- 336
            SV+ A   +     +  Q+H +  K G  +  SV NA ++ Y SC              
Sbjct: 134 SSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMAA 193

Query: 337 ----------GKIDEAC---MIFARLQEKDIVS---------------WNTMISTYAQRN 368
                     G+ DE     +I   ++  D+V+               WN MIS Y  R 
Sbjct: 194 ARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHRG 253

Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITN----I 421
               A      M S+GI+ DE+T+ S+++++   G   +   +HA+V    +  +    +
Sbjct: 254 FYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVL 313

Query: 422 QVSNALISAYAK-------------------------------NERIKQAYQIFHNMSPR 450
            V+NALI+ Y +                                 RI++A  IF  M  R
Sbjct: 314 SVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVR 373

Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
           +++TW  +I+G   NGF  +GL+ F+++ +  L P +Y  + A++SC+ + SL +G+Q+H
Sbjct: 374 SLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLH 433

Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
             +++    S +S+GNA+IT+Y++CG ++ +  VF  M   D++SWNA+I+A AQHG G 
Sbjct: 434 SQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGV 493

Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSC 630
           +A+  ++ M     I PD+ TF  +LSACSHAGLV +G   FD+M   YG  P EDH S 
Sbjct: 494 QAIQLYEKMLKED-ILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSR 552

Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK 690
           ++DLL RAG   EA+ V  S   +  +  W AL + C  HGN+ LG   A  LLE    +
Sbjct: 553 LIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQ 612

Query: 691 PSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
              Y+ LSN+YAA G W+E A +R+L++  GV K+PGCSWI
Sbjct: 613 DGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWI 653



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 289/638 (45%), Gaps = 103/638 (16%)

Query: 68  ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT 127
           A L + +F   +HA+ L +G K +P + N ++  Y  + ++   + +F +I  PD+ + T
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 128 TFLSACTKMGHVDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           T LSA +  G++  A ++F+  P   RD   YNAMIT  + +      + LF +M +L  
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126

Query: 186 RRDNYSFASVLSVCD--AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN--VVD 241
             D ++F+SVL      A      +QLH  V K G   + SV+NAL++ Y +C +  +V+
Sbjct: 127 VPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVN 186

Query: 242 AC-------KVFEEAK--------------GYV---------------CDHI--SYNVMM 263
           +C       K+F+EA               GYV                DHI  ++N M+
Sbjct: 187 SCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMI 246

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
            G    G  EEA    R M    ++  E T+ SV+SA        +G QVHA  +++  +
Sbjct: 247 SGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQ 306

Query: 321 A----YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN------------------ 358
                  SV+NA IT+Y+ CGK+ EA  +F ++  KD+VSWN                  
Sbjct: 307 PSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSI 366

Query: 359 -------------TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFI 402
                         MIS  AQ   G   +  + +M+  G+ P ++ +   +AS    G +
Sbjct: 367 FREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSL 426

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           +  + +H+ +   G  +++ V NALI+ Y++   ++ A  +F  M   + ++WN +I   
Sbjct: 427 DNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAAL 486

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI-------HGYVLK 515
             +G  VQ +Q + ++L  ++ PD  T    LS+C+    ++ G+         +G   +
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPE 546

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVS 574
            +  S+      +I L  + G    +  V  +M  E     W AL++    HG  +  + 
Sbjct: 547 EDHYSR------LIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGI- 599

Query: 575 CFKAMQDVGRIKPDQ-ATFTAVLSACSHAGLVDDGTRI 611
             +A   +  + P Q  T+ ++ +  +  G  D+  R+
Sbjct: 600 --QAADRLLELMPQQDGTYISLSNMYAALGQWDEVARV 635



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 151/282 (53%), Gaps = 8/282 (2%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++     G Y++A  L  ++HS   ++ D Y+ ++ ++A +N      G Q+HAY L
Sbjct: 243 NAMISGYVHRGFYEEAFDLLRRMHSL-GIQLDEYTYTSVISAASNAGLFNIGRQVHAYVL 301

Query: 85  RAGLKAYPH----VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           R  ++   H    V N +++LY     LV  +RVF ++   D+ SW   LS C     ++
Sbjct: 302 RTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIE 361

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  +F +MP R L  +  MI+G  +NG+ + G+ LF +M    +   +Y++A  ++ C 
Sbjct: 362 EANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCS 421

Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L+ G+QLHS + + G    +SV NALITMY  CG V  A  VF     YV D +S+
Sbjct: 422 VLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMP-YV-DSVSW 479

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           N M+  LA  G   +A+  +  ML   + P  +TF++++SAC
Sbjct: 480 NAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSAC 521



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
           A++S     + +H ++L +       + N +I  Y K  ++  +  +F+ + + D ++  
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            ++SAY+  G  K A   F A     R   D  ++ A+++A SH+       ++F  M  
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIR---DTVSYNAMITAFSHSHDGHAALQLFVQM-K 122

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
             GF+P     S +L  L        A+   + Q +      W AL
Sbjct: 123 RLGFVPDPFTFSSVLGALSLI-----ADEETHCQQLHCEVFKWGAL 163


>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
 gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Cucumis sativus]
          Length = 712

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 186/589 (31%), Positives = 300/589 (50%), Gaps = 65/589 (11%)

Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
           ++S   +  L  G+QLH  +  SG      +V+ L+  Y +   + +A  + E +  +  
Sbjct: 86  LVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVETSNLF-- 143

Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQA 314
              S+N+++         E A++ ++ M+   +RP   TF S++ AC           Q 
Sbjct: 144 RPCSWNILITSYVKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKAC--------GETQN 195

Query: 315 MKSGFEAYTSVS-----------NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIST 363
           +K G E + S++           NA I+MY  CG++D A  +F  + E+D VSWN+MIS 
Sbjct: 196 LKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISC 255

Query: 364 YAQRNLGRSAILAYLEMQSVGI---------------RPDEFTFGSLLASS--------- 399
           Y+ R + R A   +  MQS  +               R   FT    L S          
Sbjct: 256 YSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLD 315

Query: 400 --------------GFIEMVEMIHAFVF--INGIITNIQVSNALISAYAKNERIKQAYQI 443
                         G I + + IH F     + +++ +Q  NAL++ YA+ + I+ AY +
Sbjct: 316 DVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQ--NALVTMYARCKDIRHAYML 373

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F     ++ ITWN++++G    G   + L  F ELL+  + PD  T +  L  CAR++ L
Sbjct: 374 FRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADL 433

Query: 504 RHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           +HG++ H Y+ K+ +    + L NA++ +YA+ G +  + R+F  + +KD +++ +LI+ 
Sbjct: 434 QHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAG 493

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y   GEG +AV  F+ M+   +IKPD  T  AVLSACSH+GLV+    +F  M + +G  
Sbjct: 494 YGMQGEGGKAVRLFEEMKRF-QIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLS 552

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P  +H +CM DL GR G L++A+ +I     +  S  W  L  AC  HGN+ +G   A  
Sbjct: 553 PRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEK 612

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLE   +    YVL++N+YAAAG W + A IR L++ +GV K PGCSW+
Sbjct: 613 LLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWV 661



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 133/603 (22%), Positives = 257/603 (42%), Gaps = 82/603 (13%)

Query: 14  SNTSKELLLKLNISLANLSRSGHYQDALHLF--VQIHSSHKLKPDIY--SLSTTLAACAN 69
           SN+S+ ++  +  SL + +  G    +   F  +Q+ +S+    D+   S+S  L +C  
Sbjct: 32  SNSSEFMIGSIFSSLKDFASHGQLSKSFEAFSLIQLRTSYNDSFDLILQSISILLVSCTK 91

Query: 70  LRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF 129
             +   G QLH + + +GL     + + ++  Y ++ + +       E  N         
Sbjct: 92  SSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFY-SSLEFLPEAHTLVETSN--------L 142

Query: 130 LSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDN 189
              C+                      +N +IT   ++   +  I  +++M    VR DN
Sbjct: 143 FRPCS----------------------WNILITSYVKHKLYEAAILAYKQMVSKGVRPDN 180

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
           ++F S+L  C +   L+FG ++H  +        + V NALI+MY  CG V  A  +F+ 
Sbjct: 181 FTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDN 240

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL------ 302
                 D +S+N M+   +S G   EA   F  M    L  + +T+  +   CL      
Sbjct: 241 MLER--DAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFT 298

Query: 303 ---------------------------CP-----RVGYQVHAQAMKSGFEAYTSVSNAAI 330
                                      C      R+G ++H   ++      ++V NA +
Sbjct: 299 QALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALV 358

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
           TMY+ C  I  A M+F    +K  ++WN+M+S          A+  + E+   G+ PD  
Sbjct: 359 TMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYV 418

Query: 391 TFGSLL---ASSGFIEMVEMIHAFVFIN-GIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           TF S+L   A    ++     H ++  +     ++ + NAL+  YA+  ++ +A +IF++
Sbjct: 419 TFASILPLCARVADLQHGREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYS 478

Query: 447 MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHG 506
           +S ++ +T+ +LI G+ + G   + ++ F E+   +++PD  T+   LS+C+    +   
Sbjct: 479 LSKKDEVTYTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQA 538

Query: 507 KQIHGYVLK-NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYA 564
           + +   +   + L  ++     M  L+ + G L+ +  +   M  + T + W  LI A  
Sbjct: 539 ELLFAEMQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACC 598

Query: 565 QHG 567
            HG
Sbjct: 599 IHG 601


>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
 gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
 gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
 gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
 gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
          Length = 622

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 196/603 (32%), Positives = 305/603 (50%), Gaps = 96/603 (15%)

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G V  A  +FD MPDRD+  + AM+      G       LF    + D RR+  ++ ++L
Sbjct: 55  GRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLF---DRPDARRNVVTWTALL 111

Query: 197 S-------VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
           S       V +A  L  G    ++V+           N ++  Y   G V DA  +F   
Sbjct: 112 SGYARARRVDEAEALFEGMAERNVVS----------WNTMLEAYTAVGRVEDASALFNRM 161

Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ 309
              V D  S+N+++ GL   G +E A   F  M V            VMS          
Sbjct: 162 P--VRDAGSWNILLCGLVRSGSLERARKMFERMPVRD----------VMS---------- 199

Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
                       +T++    I+  +  G +D+A ++F  + E+++VSWN MIS YA+ + 
Sbjct: 200 ------------WTTM----ISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARNHR 243

Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
              A+  + +M                                     I ++   N +I+
Sbjct: 244 IEEALDLFTKMP------------------------------------IRDVASWNIMIT 267

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            + +N+ +K A Q+F  M  RN+ITW T++NG+L        L+ F+ +L+  ++P++ T
Sbjct: 268 GFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVT 327

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
              +L +C+ +++L  G+Q+H  + K        + + ++ LYAKCG++  +  VF+  +
Sbjct: 328 FLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFSM 387

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           EKD ISWN +I+AYA HG G EA+  +K MQ+ G  KP+ AT+  +LSACSHAGLVD+G 
Sbjct: 388 EKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENG-YKPNDATYVGLLSACSHAGLVDEGL 446

Query: 610 RIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW-ALFSACA 668
           +IF+SMV D   +  ++H +C++DL  RAG L++A+R+I+   I+  S   W AL   C 
Sbjct: 447 KIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGGCN 506

Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
           +HGN  +G + A  LLE E D    Y LL NIYA+AG W+EAA IR  +   G+ KQPGC
Sbjct: 507 SHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGC 566

Query: 729 SWI 731
           SWI
Sbjct: 567 SWI 569



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 58/397 (14%)

Query: 108 LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN 167
           L   +++F  +   DV SWTT +S   + G VD A  +FD MP+R++  +NAMI+G   N
Sbjct: 182 LERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVSWNAMISGYARN 241

Query: 168 GYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVN 227
              +  + LF +M   D                                      V+  N
Sbjct: 242 HRIEEALDLFTKMPIRD--------------------------------------VASWN 263

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
            +IT +    ++  A ++F+E      + I++  MM+G     + E AL  F  MLV  +
Sbjct: 264 IMITGFIQNKDLKSARQLFDEMPKR--NVITWTTMMNGYLQCMQSEMALKLFNCMLVQGI 321

Query: 288 RPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
           +P+++TF+  + AC     LC   G QVH    K+  +  T V +  + +Y+ CG+I  A
Sbjct: 322 QPNQVTFLGSLDACSNLAALCE--GQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLA 379

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---S 399
             +F    EKD++SWN +I+ YA    G  A+  Y  MQ  G +P++ T+  LL++   +
Sbjct: 380 RNVFDFSMEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPNDATYVGLLSACSHA 439

Query: 400 GFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI--FHNMSPRNIITWN 456
           G + E +++  + V  N I+   +    L+   ++  R++ A ++  +  + P +   W+
Sbjct: 440 GLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLISWFKIKPTSSTVWS 499

Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDE---YTL 490
            L+ G   +G    G      LL +E  PD    YTL
Sbjct: 500 ALLGGCNSHGNESIGDLAAKHLLEAE--PDNAGTYTL 534



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 198/444 (44%), Gaps = 75/444 (16%)

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SN  +   ++ G++ +A  +F  + ++D+VSW  M++ YA+R + + A + +        
Sbjct: 44  SNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLF-------D 96

Query: 386 RPDE----FTFGSLLASSGFIEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQA 440
           RPD      T+ +LL  SG+     +  A     G+   N+   N ++ AY    R++ A
Sbjct: 97  RPDARRNVVTWTALL--SGYARARRVDEAEALFEGMAERNVVSWNTMLEAYTAVGRVEDA 154

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNG-----------FPVQGLQHFSELLMSELR----P 485
             +F+ M  R+  +WN L+ G + +G            PV+ +  ++ ++    R     
Sbjct: 155 SALFNRMPVRDAGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVD 214

Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKN------NLISKMSL-----GNAMITLYAK 534
           D + L  A+     +S       I GY   +      +L +KM +      N MIT + +
Sbjct: 215 DAWVLFDAMPERNVVS---WNAMISGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQ 271

Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTA 594
             DL  + ++F+ M +++ I+W  +++ Y Q  + + A+  F  M   G I+P+Q TF  
Sbjct: 272 NKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQG-IQPNQVTFLG 330

Query: 595 VLSACSHAGLVDDGTRI----------FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
            L ACS+   + +G ++          FD+ V            S +++L  + G +  A
Sbjct: 331 SLDACSNLAALCEGQQVHQMICKTPSQFDTFVE-----------STLMNLYAKCGEIRLA 379

Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD---KP--SVYVLLSN 699
             V +   ++    +W  + +A A HG    G I A  L +  Q+   KP  + YV L +
Sbjct: 380 RNVFDFS-MEKDLISWNGIIAAYAHHG---FG-IEAMHLYKNMQENGYKPNDATYVGLLS 434

Query: 700 IYAAAGLWEEAANIRELLKRTGVI 723
             + AGL +E   I E + +   I
Sbjct: 435 ACSHAGLVDEGLKIFESMVKDNSI 458


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 194/683 (28%), Positives = 330/683 (48%), Gaps = 52/683 (7%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           G + +A+  F ++ +   +KP+  +L++ L ACA +     G ++HA  L         V
Sbjct: 290 GQHWEAIKTF-ELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTV 348

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
            N   SLY     +    RVFS I                               P +D 
Sbjct: 349 LNAAASLYAKCSRVADASRVFSSI-------------------------------PCKDA 377

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC----------DAGLL 204
             +NA+++   + G     I L R+M       D+ +F ++L  C          ++  L
Sbjct: 378 VSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSL 437

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
             GRQ+HS +  +G      + N L+ MY  CG++ DA   F+       +  S+ +++ 
Sbjct: 438 TDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR--NVFSWTILIS 495

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEA 321
            L   G   E L   + M +     +++TF+S++ AC       +G  +H +    G E+
Sbjct: 496 LLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLES 555

Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
               SNA + MY++C  +DEA ++F R+  +D+VSW  +IS YA       A+  Y  M+
Sbjct: 556 DIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRME 615

Query: 382 SVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAFVFINGIITNIQVSNALISAYAKNERIK 438
               RPD  T  S+L A +    +VE   IH  +  +G+ T++ V  A++S Y K E ++
Sbjct: 616 QEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVE 675

Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
            A Q+F  +  ++I+ WN +I  +  N    +    + E++ +++ P++ TL   L SC+
Sbjct: 676 DARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCS 735

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC-GDLDCSLRVFNMMIEKDTISWN 557
               +  G  +H        +S  S+ NA+I +YAKC G+L+ +   F  +  K+ +SW+
Sbjct: 736 STCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWS 795

Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
           ++++AYA++GE   A + F  M   G + P+  TFT+VL ACSHAGL D+G   F SM  
Sbjct: 796 SIVAAYARNGEEDRARNLFWTMNQDG-VLPNIVTFTSVLHACSHAGLADEGWSYFLSMQG 854

Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
           D+   P  +H  CM++LL ++G + +A   +++  +Q  +  W +L  AC  H +   G 
Sbjct: 855 DHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGA 914

Query: 678 IIAGLLLEREQDKPSVYVLLSNI 700
           + A  LL+ E    + YVLL NI
Sbjct: 915 LAAKQLLDAEPRNSAAYVLLYNI 937



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 193/686 (28%), Positives = 317/686 (46%), Gaps = 59/686 (8%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D  +L   ++ACA L ++  G Q+HA  L +GL A   ++N+++ +Y             
Sbjct: 9   DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYG------------ 56

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                              K G V+ A   FD+MP+RDL  +NAMIT   ++      I 
Sbjct: 57  -------------------KCGSVEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQ 97

Query: 176 LFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           L+        + D  +FAS+L+ C A G L+FGR LH     + F     V N LI+MY 
Sbjct: 98  LYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYS 157

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
           +CG++ DA  VFE +  +  D  ++  ++      G++E A   +  M    LR +E+TF
Sbjct: 158 DCGSLDDATAVFEWS--FRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITF 215

Query: 295 VSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK-IDEACMIFARLQ 350
           ++V+  C    V   G  VH  A+ SG +    + N+ I+MY  C +  DEA  +F R+ 
Sbjct: 216 LTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRIS 275

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
              ++SW+  I+ Y Q      AI  +  M   G++P+  T  S+L   A+ G  E    
Sbjct: 276 RPSVISWSAFIAAYGQH---WEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRR 332

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IHA V       N  V NA  S YAK  R+  A ++F ++  ++ ++WN +++ +   G 
Sbjct: 333 IHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGL 392

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARIS---------SLRHGKQIHGYVLKNNL 518
               +    ++ +    PD+ T    L SC++ +         SL  G+Q+H  ++ N L
Sbjct: 393 FRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGL 452

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                LGN ++ +Y +CG LD +   F  + +++  SW  LIS   Q+GE  E +   K+
Sbjct: 453 DGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKS 512

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M D+   + ++ TF ++L ACS  G +  G  I +  +   G        + +L++    
Sbjct: 513 M-DLEGTEANKITFISLLGACSVTGDLSLGKTIHER-IRTKGLESDIITSNALLNMYTTC 570

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
             LDEA  V   + +  R    W +  +  AH    L  +     +E+E  +P    L+S
Sbjct: 571 ESLDEARLVF--ERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLIS 628

Query: 699 NIYAAAGLWE--EAANIRELLKRTGV 722
            + A A L    E   I E +  +GV
Sbjct: 629 VLEACASLRALVEGKAIHERIVASGV 654



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 288/602 (47%), Gaps = 57/602 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R G  + A   + ++H    L+ +  +  T L  C++L     G  +H  AL +G
Sbjct: 184 IAAYTRHGKLECAFATWSKMHQ-EGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSG 242

Query: 88  LKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
           L     + N+++S+Y K +R     + VF  I  P V SW+ F++A              
Sbjct: 243 LDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAA-------------- 288

Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLE 205
                                G     I  F  M+   V+ +  +  SVL  C   G  E
Sbjct: 289 --------------------YGQHWEAIKTFELMNLEGVKPNATTLTSVLRACATVGAHE 328

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMD 264
            GR++H+LV    ++   +V+NA  ++Y  C  V DA +VF       C D +S+N ++ 
Sbjct: 329 QGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIP---CKDAVSWNAIVS 385

Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV------------GYQVHA 312
             A  G   +A+   R M V    P ++TF++++ +C    +            G QVH+
Sbjct: 386 AYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHS 445

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
           Q + +G +  T + N  + MY  CG +D+A   F  + ++++ SW  +IS   Q      
Sbjct: 446 QMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQNGEASE 505

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALIS 429
            +     M   G   ++ TF SLL +   +G + + + IH  +   G+ ++I  SNAL++
Sbjct: 506 GLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLESDIITSNALLN 565

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            Y   E + +A  +F  M  R++++W  +I+ +   G+P++ LQ +  +     RPD  T
Sbjct: 566 MYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVT 625

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   L +CA + +L  GK IH  ++ + + + + +G A+++ Y KC  ++ + +VF+ ++
Sbjct: 626 LISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRIL 685

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT 609
           +KD + WNA+I AYAQ+   ++A + +  M +  ++ P+  T   +L +CS    ++ G+
Sbjct: 686 DKDIVCWNAMIGAYAQNHCEEKAFALYLEMVE-NQMPPNDVTLITLLDSCSSTCKMERGS 744

Query: 610 RI 611
            +
Sbjct: 745 SL 746



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 164/594 (27%), Positives = 280/594 (47%), Gaps = 61/594 (10%)

Query: 45  VQIHSSHKL---KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSL 101
           +Q+++  +L   KPD  + ++ L AC    +  FG  LH + L     +   V N ++S+
Sbjct: 96  IQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHEHFLGTSFVSDQIVCNGLISM 155

Query: 102 YKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMI 161
           Y +   L     VF     PDV +WTT ++A T+ G ++ A   + K             
Sbjct: 156 YSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLECAFATWSK------------- 202

Query: 162 TGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFS 220
                             MH+  +R +  +F +VL  C +  +LE G+ +H L   SG  
Sbjct: 203 ------------------MHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD 244

Query: 221 CLVSVVNALITMYFNCGNVVD-ACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIR 278
             + + N+LI+MY  C    D A +VF   ++  V   IS++     +A+ G+  EA+  
Sbjct: 245 FSLRMENSLISMYGKCSRHPDEAREVFLRISRPSV---ISWSAF---IAAYGQHWEAIKT 298

Query: 279 FRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           F  M +  ++P+  T  SV+ AC        G ++HA  +   +   T+V NAA ++Y+ 
Sbjct: 299 FELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAK 358

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
           C ++ +A  +F+ +  KD VSWN ++S YA++ L R AI    +MQ  G  PD+ TF ++
Sbjct: 359 CSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITI 418

Query: 396 LASSGFIEMVE------------MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
           L S     +++             +H+ +  NG+  +  + N L+  Y +   +  A   
Sbjct: 419 LYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAA 478

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  +  RN+ +W  LI+  + NG   +GL+    + +     ++ T    L +C+    L
Sbjct: 479 FQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDL 538

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
             GK IH  +    L S +   NA++ +Y  C  LD +  VF  M+ +D +SW  +ISAY
Sbjct: 539 SLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAY 598

Query: 564 AQHGEGKEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
           A  G   EA+  ++ M Q+  R  PD  T  +VL AC+    + +G  I + +V
Sbjct: 599 AHAGYPLEALQLYRRMEQEFSR--PDAVTLISVLEACASLRALVEGKAIHERIV 650



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 4/231 (1%)

Query: 384 GIRPDEFTF---GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G+  DE T     S  A+ G     + IHA +  +G+  ++ +SN+L+  Y K   +++A
Sbjct: 5   GVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEA 64

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
              F  M  R++I+WN +I  +  +    Q +Q ++   +   +PDE T +  L++C   
Sbjct: 65  RNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFAS 124

Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
             L+ G+ +H + L  + +S   + N +I++Y+ CG LD +  VF      D  +W  +I
Sbjct: 125 GDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184

Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           +AY +HG+ + A + +  M   G ++ ++ TF  VL  CS   +++ G  +
Sbjct: 185 AAYTRHGKLECAFATWSKMHQEG-LRSNEITFLTVLDTCSSLEVLETGKHV 234


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 178/540 (32%), Positives = 291/540 (53%), Gaps = 16/540 (2%)

Query: 204 LEFGRQLHS-LVTKSGFS--CLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           L FG+ +H+ LV ++  S    ++ +N+LI +Y  CG    A K+F+       + +S++
Sbjct: 39  LRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQR--NVVSWS 96

Query: 261 VMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMK 316
            +M G    G V E L  FR+++ + S  P+E  F  V+S C    RV  G Q H   +K
Sbjct: 97  ALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLK 156

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           SG   +  V NA I MYS C  +D A  I   +   D+ S+N+++S   +      A   
Sbjct: 157 SGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQV 216

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAK 433
              M    +  D  T+ S+L     I  +++   IHA +   G++ ++ VS+ LI  Y K
Sbjct: 217 LKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGK 276

Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
              +  A + F  +  RN++ W  ++  +L NG   + L  F+++ + + RP+E+T +V 
Sbjct: 277 CGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVL 336

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
           L++CA + +L +G  +HG ++ +   + + +GNA+I +Y+K G++D S  VF+ M+ +D 
Sbjct: 337 LNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDV 396

Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
           I+WNA+I  Y+ HG GK+A+  F+ M   G   P+  TF  VLSAC H  LV +G   FD
Sbjct: 397 ITWNAMICGYSHHGLGKQALLVFQDMMSAGEC-PNYVTFIGVLSACVHLALVQEGFYYFD 455

Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD--NWWALFSACAAHG 671
            ++  +   P  +H +CM+ LLGRAG LDEAE  + +   Q + D   W  L +AC  H 
Sbjct: 456 QIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTT-TQVKWDVVAWRTLLNACHIHR 514

Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           N  LG+ I   +++ +      Y LLSN++A A  W+    IR+L+K   + K+PG SW+
Sbjct: 515 NYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWL 574



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 239/481 (49%), Gaps = 18/481 (3%)

Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
           ++ D+    + ++  +K G    A ++FD+M  R++  ++A++ G    G     +GLFR
Sbjct: 57  KDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFR 116

Query: 179 EMHKLDVRRDN-YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNC 236
            +  LD    N Y F  VLS C D+G ++ G+Q H  + KSG      V NALI MY  C
Sbjct: 117 NLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRC 176

Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
            +V  A ++ +   G   D  SYN ++  L   G   EA    + M+   +    +T+VS
Sbjct: 177 FHVDSAMQILDTVPGD--DVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVS 234

Query: 297 VMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKD 353
           V+  C   R   +G Q+HAQ +K+G      VS+  I  Y  CG++  A   F  L++++
Sbjct: 235 VLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRN 294

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EMIHA 410
           +V+W  +++ Y Q       +  + +M+    RP+EFTF  LL A +  + +   +++H 
Sbjct: 295 VVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHG 354

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            + ++G   ++ V NALI+ Y+K+  I  +Y +F NM  R++ITWN +I G+  +G   Q
Sbjct: 355 RIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQ 414

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMI 529
            L  F +++ +   P+  T    LS+C  ++ ++ G      ++K  ++   +     M+
Sbjct: 415 ALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMV 474

Query: 530 TLYAKCGDLDCSLRVFN--MMIEKDTISWNALISA---YAQHGEGKEAVSCFKAM--QDV 582
            L  + G LD +         ++ D ++W  L++A   +  +  GK+       M   DV
Sbjct: 475 ALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDV 534

Query: 583 G 583
           G
Sbjct: 535 G 535



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 199/440 (45%), Gaps = 47/440 (10%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
            G   + L LF  + S     P+ Y  +  L+ CA+      G Q H Y L++GL  + +
Sbjct: 105 KGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQY 164

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N ++ +Y     + S  ++   +   DV+S+ + LSA  + G    A +V  +M D  
Sbjct: 165 VKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDE- 223

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                     C                    V  D+ ++ SVL +C     L+ G Q+H+
Sbjct: 224 ----------C--------------------VIWDSVTYVSVLGLCAQIRDLQLGLQIHA 253

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
            + K+G    V V + LI  Y  CG V++A K F+  +    + +++  ++      G  
Sbjct: 254 QLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDR--NVVAWTAVLTAYLQNGHF 311

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAA 329
           EE L  F  M +   RP+E TF  +++AC   +    G  +H + + SGF+ +  V NA 
Sbjct: 312 EETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNAL 371

Query: 330 ITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDE 389
           I MYS  G ID +  +F+ +  +D+++WN MI  Y+   LG+ A+L + +M S G  P+ 
Sbjct: 372 INMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNY 431

Query: 390 FTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNAL------ISAYAKNERIKQAYQI 443
            TF  +L++   + +V+    F + + I+    V   L      ++   +   + +A   
Sbjct: 432 VTFIGVLSACVHLALVQ--EGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENF 489

Query: 444 FHNMS--PRNIITWNTLING 461
               +    +++ W TL+N 
Sbjct: 490 MKTTTQVKWDVVAWRTLLNA 509



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISK---MSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
           L   A   SLR GK IH  ++  N  SK   ++  N++I LY+KCG   C+ ++F+ M++
Sbjct: 30  LKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQ 89

Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
           ++ +SW+AL+  Y   GE  E +  F+ +  +    P++  FT VLS C+ +G V +G +
Sbjct: 90  RNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQ 149

Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
               ++   G +  +   + ++ +  R  ++D A +++++
Sbjct: 150 CHGYLLKS-GLLLHQYVKNALIHMYSRCFHVDSAMQILDT 188


>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 596

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 156/463 (33%), Positives = 259/463 (55%), Gaps = 7/463 (1%)

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVG--YQVHAQAMKSGFEAYTSVSNAAITM 332
           + + +R M    + PS  TF  ++ A    R    +Q HA  +K GF++   V N+ I+ 
Sbjct: 88  SFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQFHAHILKFGFDSDLFVRNSLISG 147

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS+CG  +    +F   ++KD+VSW  MI  + + +    A+  ++EM+  G+  +E T 
Sbjct: 148 YSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTV 207

Query: 393 GSLLASSGFIEMVEM---IHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMS 448
            S+L ++   E V     IH F    G +  ++ + ++L+  Y K      A ++F  M 
Sbjct: 208 VSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMP 267

Query: 449 PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQ 508
            RN++TW  LI G++      +G+  F E+L S++ P+E TLS  LS+CA + +L  G++
Sbjct: 268 SRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327

Query: 509 IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGE 568
           +H YV+KN++    ++G  +I  YAKCG L+ ++ VF  + EK+  +W A+I+ +A HG 
Sbjct: 328 VHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGY 387

Query: 569 GKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL 628
              AV  F  M     + P++ TF  VLSAC+H GLV++G R+F SM   +   P  DH 
Sbjct: 388 AIGAVDLFHTMLS-SHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHY 446

Query: 629 SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ 688
           +CM+DL GR G L+EA+ +I    ++  +  W ALF +C  H +  LG+  A  +++ + 
Sbjct: 447 ACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQP 506

Query: 689 DKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
                Y LL+N+Y+ +  W++ A +R+ +K   V+K PGCSWI
Sbjct: 507 SHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWI 549



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 209/456 (45%), Gaps = 29/456 (6%)

Query: 177 FREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
           +R+M +  V    ++F  +L       DA   +F    H+ + K GF   + V N+LI+ 
Sbjct: 92  YRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQF----HAHILKFGFDSDLFVRNSLISG 147

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y NCG      +VF+  +    D +S+  M+DG        EA+  F +M  + +  +E+
Sbjct: 148 YSNCGLFEFGSRVFDGTEDK--DVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEM 205

Query: 293 TFVSVMSACLCP---RVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
           T VSV+ A       R G  +H   +++G       + ++ + MY  CG  D+A  +F  
Sbjct: 206 TVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDE 265

Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMV 405
           +  +++V+W  +I+ Y Q       +  + EM    + P+E T  S+L   A  G +   
Sbjct: 266 MPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325

Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
             +H +V  N I  N  V   LI  YAK   +++A  +F  +  +N+ TW  +INGF  +
Sbjct: 326 RRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAH 385

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSL 524
           G+ +  +  F  +L S + P+E T  V LS+CA    +  G+++   + +  NL  K   
Sbjct: 386 GYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADH 445

Query: 525 GNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGE---GKEAVSCFKAMQ 580
              M+ L+ + G L +    +  M +E     W AL  +   H +   GK A S      
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAAS------ 499

Query: 581 DVGRIKPDQA-TFTAVLSACSHAGLVDDGTRIFDSM 615
            V +++P  +  +T + +  S +   DD  R+   M
Sbjct: 500 RVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQM 535



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 39/357 (10%)

Query: 55  PDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
           P  ++    L A   LR+A    Q HA+ L+ G  +   V N+++S Y N          
Sbjct: 102 PSRHTFPPLLKAVFKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNC--------- 151

Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
                                 G  ++   VFD   D+D+  + AMI G   N      +
Sbjct: 152 ----------------------GLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAM 189

Query: 175 GLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNALITM 232
             F EM +  V  +  +  SVL     A  + FGR +H    ++G   C V + ++L+ M
Sbjct: 190 TYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDM 249

Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSEL 292
           Y  CG   DA KVF+E      + +++  ++ G       E+ +  F +ML + + P+E 
Sbjct: 250 YGKCGCYDDAQKVFDEMPSR--NVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEK 307

Query: 293 TFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL 349
           T  SV+SAC        G +VH   +K+  E  T+V    I  Y+ CG ++EA ++F RL
Sbjct: 308 TLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERL 367

Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
           +EK++ +W  MI+ +A       A+  +  M S  + P+E TF  +L++     +VE
Sbjct: 368 REKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVE 424



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 34/264 (12%)

Query: 39  DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTI 98
           +A+  FV++  S  +  +  ++ + L A     +  FG  +H + L AG           
Sbjct: 187 EAMTYFVEMKRS-GVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAG----------- 234

Query: 99  LSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYN 158
                         RV       DV+  ++ +    K G  D A +VFD+MP R++  + 
Sbjct: 235 --------------RV-----RCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWT 275

Query: 159 AMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
           A+I G  +    + G+ +F EM K DV  +  + +SVLS C   G L  GR++H  V K+
Sbjct: 276 ALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKN 335

Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
                 +V   LI  Y  CG + +A  VFE  +    +  ++  M++G A+ G    A+ 
Sbjct: 336 SIEINTTVGTTLIDFYAKCGCLEEAILVFERLREK--NVYTWTAMINGFAAHGYAIGAVD 393

Query: 278 RFRDMLVASLRPSELTFVSVMSAC 301
            F  ML + + P+E+TF+ V+SAC
Sbjct: 394 LFHTMLSSHVSPNEVTFIVVLSAC 417



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 33/175 (18%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           ++  + +F ++  S  + P+  +LS+ L+ACA++     G ++H Y ++  ++    V  
Sbjct: 287 FEKGMFVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGT 345

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
           T++  Y     L     VF  ++  +VY+WT                             
Sbjct: 346 TLIDFYAKCGCLEEAILVFERLREKNVYTWT----------------------------- 376

Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
             AMI G   +GY    + LF  M    V  +  +F  VLS C   GL+E GR+L
Sbjct: 377 --AMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRL 429


>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
 gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
          Length = 571

 Score =  301 bits (772), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 177/574 (30%), Positives = 304/574 (52%), Gaps = 10/574 (1%)

Query: 156 VYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVT 215
           ++ AMITG  ++G     I  F EM +  V  D  ++ +VL       LE GR++H  + 
Sbjct: 3   IWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQD--LEQGRRIHVRIQ 60

Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
           ++G+   + V NAL+ MY  C ++ DA +VFE       D +S+  ++   A  G    A
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHR--DVVSWTSIIAANARAGDFPAA 118

Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
           +  FR M +   RP+ +T + +++ C  P  G  +H +A  SG  +   V NA + MY+ 
Sbjct: 119 MGLFRRMQLQGTRPNRITLLELLAWCDDPDEGAAIHERAFASGLRSDVPVCNAILNMYAK 178

Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
            G+ + A  +F R+  ++ VSW  M++   +      A+  + +M+  G+ PD   F ++
Sbjct: 179 AGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITV 238

Query: 396 LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP-RNIIT 454
           + +         IH  +   G  ++  VSNA+I AYA+   +K+AY+ F  +   R+ ++
Sbjct: 239 INACSSAATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVS 298

Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
           W T+I+ F   G   + +Q F E+L+  +R +E TL   +++CA  S+++ G+ IH  V+
Sbjct: 299 WTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWIHDCVI 358

Query: 515 KNNLISKMSL-GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAV 573
              L    S+   A++ +Y KCG L+ + R+F  + + D +SW ++I+A AQ+G+G  A 
Sbjct: 359 GYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNGDGSSAA 418

Query: 574 SCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDY--GFIPAEDHLSCM 631
             F AMQ  G ++P   TF +V++ACSHAGLVD G      +  D+  G     +H  C+
Sbjct: 419 RLFCAMQLEG-VRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHREGIELTLEHCGCI 477

Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKP 691
           +DLL RAG L+EAE VI+S   +     W A  + C A+ ++  G+  A  +L  ++   
Sbjct: 478 VDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKAYEDISRGQRAAAQILGLDEKTT 537

Query: 692 SVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
           +  + LS+ YAA+    +   +R L+   G +K+
Sbjct: 538 AAVIALSSTYAASDRRGDGEALRGLMA-DGCLKE 570



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMK 316
           + +  M+ G A  G    A+  F +M    + P ++T+V+V+ A      G ++H +  +
Sbjct: 2   VIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDLEQGRRIHVRIQE 61

Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
           +G++    V+NA + MY++C  + +A  +F  +  +D+VSW ++I+  A+     +A+  
Sbjct: 62  TGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMGL 121

Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
           +  MQ  G RP+  T   LLA     +    IH   F +G+ +++ V NA+++ YAK  R
Sbjct: 122 FRRMQLQGTRPNRITLLELLAWCDDPDEGAAIHERAFASGLRSDVPVCNAILNMYAKAGR 181

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
            + A ++F  M  RN ++W  ++   +  G     L+ F ++    + PD       +++
Sbjct: 182 FETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINA 241

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE-KDTIS 555
           C   SS    + IHG +++    S  ++ NA+I  YA+CG L  + R F  + E +D +S
Sbjct: 242 C---SSAATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERRDHVS 298

Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
           W  +ISA+A+ G  K  V  F+ M   G ++ ++ T   V++AC+ A  + +G  I D +
Sbjct: 299 WTTMISAFAEFGRIKRCVQLFREMLLEG-VRANEVTLITVVNACAGASAIKEGRWIHDCV 357

Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +       +    + +LD+ G+ G L+ A R+      Q    +W ++ +A A +G+
Sbjct: 358 IGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELE-QPDVVSWTSIIAATAQNGD 413



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 204/430 (47%), Gaps = 48/430 (11%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +A  +R+G +  A+ LF ++      +P+  +L   LA C +      G  +H  A  +G
Sbjct: 106 IAANARAGDFPAAMGLFRRMQL-QGTRPNRITLLELLAWCDDPDE---GAAIHERAFASG 161

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
           L++   V N IL++Y                                K G  + A E+F+
Sbjct: 162 LRSDVPVCNAILNMY-------------------------------AKAGRFETASELFE 190

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
           +MP R+   + AM+      G  D  + LFR+M    V  D+ +F +V++ C +      
Sbjct: 191 RMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSAAT--A 248

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +H  + + G     +V NA+I  Y  CG++ +A + F E K    DH+S+  M+   A
Sbjct: 249 RWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERR-DHVSWTTMISAFA 307

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS 324
             GR++  +  FR+ML+  +R +E+T ++V++AC      + G  +H   +    E  +S
Sbjct: 308 EFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSS 367

Query: 325 -VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V+ A + MY  CG ++ A  IF  L++ D+VSW ++I+  AQ   G SA   +  MQ  
Sbjct: 368 MVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLE 427

Query: 384 GIRPDEFTFGSLLASSGFIEMVEMIHAFV------FINGIITNIQVSNALISAYAKNERI 437
           G+RP + TF S++A+     +V++   FV         GI   ++    ++   A+  R+
Sbjct: 428 GVRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLARAGRL 487

Query: 438 KQAYQIFHNM 447
           ++A  +  +M
Sbjct: 488 EEAECVIDSM 497



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 247/559 (44%), Gaps = 51/559 (9%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   ++ G +  A+  F ++  +H L PD  +    L A  +L     G ++H      G
Sbjct: 8   ITGYAKHGDFSRAIQFFAEMERNHVL-PDKITYVAVLGAIQDLEQ---GRRIHVRIQETG 63

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
                 VAN ++ +Y                            +AC+ +     A  VF+
Sbjct: 64  YDTDLVVANALMKMY----------------------------AACSSLAD---ATRVFE 92

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG 207
            M  RD+  + ++I      G     +GLFR M     R +  +   +L+ CD    + G
Sbjct: 93  AMDHRDVVSWTSIIAANARAGDFPAAMGLFRRMQLQGTRPNRITLLELLAWCDDP--DEG 150

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
             +H     SG    V V NA++ MY   G    A ++FE     V + +S+  MM  + 
Sbjct: 151 AAIHERAFASGLRSDVPVCNAILNMYAKAGRFETASELFERMP--VRNAVSWTAMMAAMV 208

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSN 327
             GR ++AL  FRDM    + P  + F++V++AC        +H   ++ G ++ T+VSN
Sbjct: 209 RAGRHDDALRLFRDMEDDGVEPDSIAFITVINACSSAATARWIHGCIIRGGCDSDTAVSN 268

Query: 328 AAITMYSSCGKIDEACMIFARLQE-KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
           A I  Y+ CG + EA   F  ++E +D VSW TMIS +A+    +  +  + EM   G+R
Sbjct: 269 AIIRAYARCGSLKEAYRTFVEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVR 328

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQ 442
            +E T  +++   A +  I+    IH  V    +  ++  V+ AL+  Y K   ++ A +
Sbjct: 329 ANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAAR 388

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           IF  +   ++++W ++I     NG      + F  + +  +RP + T    +++C+    
Sbjct: 389 IFGELEQPDVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGL 448

Query: 503 LRHGKQIHGYVLKNN---LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNA 558
           +  GK+    + K++   +   +     ++ L A+ G L+ +  V + M  K T + W A
Sbjct: 449 VDLGKEFVTRLRKDHREGIELTLEHCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMA 508

Query: 559 LIS---AYAQHGEGKEAVS 574
            ++   AY     G+ A +
Sbjct: 509 FLAGCKAYEDISRGQRAAA 527



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 39/372 (10%)

Query: 354 IVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVF 413
           +V W  MI+ YA+      AI  + EM+   + PD+ T+ ++L +   +E    IH  + 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDLEQGRRIHVRIQ 60

Query: 414 INGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG-FPVQGL 472
             G  T++ V+NAL+  YA    +  A ++F  M  R++++W ++I      G FP   +
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPA-AM 119

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
             F  + +   RP+  TL   L+ C        G  IH     + L S + + NA++ +Y
Sbjct: 120 GLFRRMQLQGTRPNRITLLELLAWC---DDPDEGAAIHERAFASGLRSDVPVCNAILNMY 176

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
           AK G  + +  +F  M  ++ +SW A+++A  + G   +A+  F+ M+D G ++PD   F
Sbjct: 177 AKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDG-VEPDSIAF 235

Query: 593 TAVLSACSHA------------GLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             V++ACS A            G  D  T + ++++  Y                 R G 
Sbjct: 236 ITVINACSSAATARWIHGCIIRGGCDSDTAVSNAIIRAY----------------ARCGS 279

Query: 641 LDEAERVINSQHIQARSD--NWWALFSACAAHGNL-RLGRIIAGLLLEREQDKPSVYVLL 697
           L EA R      I+ R D  +W  + SA A  G + R  ++   +LLE  +      + +
Sbjct: 280 LKEAYRTF--VEIKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITV 337

Query: 698 SNIYAAAGLWEE 709
            N  A A   +E
Sbjct: 338 VNACAGASAIKE 349



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 132/302 (43%), Gaps = 48/302 (15%)

Query: 11  AGNSNTSKELLLKLNIS--------LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLST 62
           AG   T+ EL  ++ +         +A + R+G + DAL LF  +     ++PD  +  T
Sbjct: 179 AGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDD-GVEPDSIAFIT 237

Query: 63  TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI-QNP 121
            + AC++   AA    +H   +R G  +   V+N I+  Y     L    R F EI +  
Sbjct: 238 VINACSS---AATARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKERR 294

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D  SWTT +SA  + G                       I  C +         LFREM 
Sbjct: 295 DHVSWTTMISAFAEFGR----------------------IKRCVQ---------LFREML 323

Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV-NALITMYFNCGNV 239
              VR +  +  +V++ C  A  ++ GR +H  V         S+V  AL+ MY  CG++
Sbjct: 324 LEGVRANEVTLITVVNACAGASAIKEGRWIHDCVIGYQLERSSSMVATALLDMYGKCGSL 383

Query: 240 VDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
             A ++F E +    D +S+  ++   A  G    A   F  M +  +RP ++TFVSV++
Sbjct: 384 EVAARIFGELEQP--DVVSWTSIIAATAQNGDGSSAARLFCAMQLEGVRPVDVTFVSVVA 441

Query: 300 AC 301
           AC
Sbjct: 442 AC 443


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 191/623 (30%), Positives = 321/623 (51%), Gaps = 20/623 (3%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D Y  ++ +    + G ++ A +VF K+  + + ++  +I+     G+    I LF  + 
Sbjct: 61  DGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRIL 120

Query: 182 KLDVRRDNYSFASVLSVCDAG-LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           +  +  D   F SVLS C +   L  GR +H    ++G      V +AL++MY  CG++ 
Sbjct: 121 QEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLR 180

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA  +F   + ++ D + +N M+   +  G   EAL  F  ML   + P  +TFVSV  A
Sbjct: 181 DANALFGHLERHL-DVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKA 239

Query: 301 CLC-PRV-GYQV---HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
           C   P +   QV   HA   ++G  +   V+ A +  Y+ CG+ID A   FA + E++ V
Sbjct: 240 CSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAV 299

Query: 356 SWNTMISTYAQRNLGRS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
           SW +MI+ + Q  +G   A+  +  M   G+ P   T  + L     + +  ++ A    
Sbjct: 300 SWTSMIAAFTQ--IGHLLAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQE 357

Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV----- 469
            G++T++ +   L+ AYA+ +  + A ++F   S R    W+  +   ++  +       
Sbjct: 358 IGVVTDVAIVTDLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRR 414

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK-MSLGNAM 528
              + +   +   + PD      AL +CA +++L  G+QIH  V  +  + + ++LGNA+
Sbjct: 415 STFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAI 474

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
           +++Y +CG L  +   F+ M  +D ISWNA++SA AQHG  ++    F+AM   G    +
Sbjct: 475 VSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEG-FDAE 533

Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
           +  F  +LSAC+HAGLV  G   F +M  D+G +PA +H  CM+DLLGR G L +A  ++
Sbjct: 534 RIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIV 593

Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
            +  +   +  W AL  AC  +G+   GR  A  +LE   D  + YV L NIY+AAG W+
Sbjct: 594 QAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWD 653

Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
           +AA +R+++   G+ K PG S I
Sbjct: 654 DAAAVRKIMADLGLRKIPGVSSI 676



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 140/613 (22%), Positives = 245/613 (39%), Gaps = 52/613 (8%)

Query: 18  KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
           K ++L   +  A +SR GH   A+ LF +I     +  D     + L+AC++    A G 
Sbjct: 91  KSIVLWTVLISAYVSR-GHSAAAIALFHRI-LQEGIALDAIVFVSVLSACSSEEFLAAGR 148

Query: 78  QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKM 136
            +H  A+ AGL     VA+ ++S+Y     L     +F  ++ + DV  W   ++A ++ 
Sbjct: 149 LIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQN 208

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G    A E+F +M    +P                                D  +F SV 
Sbjct: 209 GSPREALEIFYRMLQLGIPP-------------------------------DLVTFVSVF 237

Query: 197 SVCDAGLLEFGRQL---HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
             C +       Q+   H+ + ++G    V V  AL+  Y  CG +  A K F E     
Sbjct: 238 KACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPER- 296

Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQ 313
            + +S+  M+     +G +  A+  F  ML+  + P+  T  + +  C   RV   V A 
Sbjct: 297 -NAVSWTSMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAI 354

Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK--DIVSWNTMISTYAQRNLGR 371
           A + G     ++    +  Y+ C   ++A  +F+  +E   D      MI+ YAQ    R
Sbjct: 355 AQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRR 414

Query: 372 SAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT-NIQVSNAL 427
           S    +      GI PD   + + L   AS   +     IHA V  +  +  ++ + NA+
Sbjct: 415 STFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAI 474

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           +S Y +   ++ A   F  M  R+ I+WN +++    +G        F  +L      + 
Sbjct: 475 VSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAER 534

Query: 488 YTLSVALSSCARISSLRHG-KQIHGYVLKNNLISKMSLGNAMITLYAKCGDL-DCSLRVF 545
                 LS+CA    ++ G +        + ++        M+ L  + G L D    V 
Sbjct: 535 IAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQ 594

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ-ATFTAVLSACSHAGL 604
            M +  D  +W AL+ A   +G+ +       A + V  ++ D  A + A+ +  S AG 
Sbjct: 595 AMPVPPDAATWMALMGACRIYGDTERGRF---AAERVLELRADHTAAYVALCNIYSAAGR 651

Query: 605 VDDGTRIFDSMVN 617
            DD   +   M +
Sbjct: 652 WDDAAAVRKIMAD 664


>gi|302809912|ref|XP_002986648.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
 gi|300145536|gb|EFJ12211.1| hypothetical protein SELMODRAFT_41458 [Selaginella moellendorffii]
          Length = 623

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 204/655 (31%), Positives = 321/655 (49%), Gaps = 59/655 (9%)

Query: 64  LAACANLRNAAFGNQLHAYALRAGLKAYPH---VANTILSLYKNARDLVSVKRVFSEIQN 120
           L ACA L+  A G ++HA+ L +   +      V N ++++Y     +   + VF+ +++
Sbjct: 9   LQACARLKALAQGQRIHAHILSSHSSSGSSSTLVLNHLINMYGKCGRVEEARAVFASMEH 68

Query: 121 PDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           P++ SW T ++A    G    A  VF  M                               
Sbjct: 69  PNLVSWNTIIAAHAAGGDGRGALAVFRAM------------------------------Q 98

Query: 181 HKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
            +  V  D  SF SV + C  G     R +H+ V   GF   V +  +LITMY  CG++ 
Sbjct: 99  LEASVVPDRVSFTSVANAC--GSAREARIIHASVAARGFLDDVIIGTSLITMYAKCGSIE 156

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA 300
           DA  VF+       + +S+N M+ G +  G   + L  FR ML   ++P+ +T + V++A
Sbjct: 157 DARLVFDSMAER--NEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNA 214

Query: 301 CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL-QEKDIVSWNT 359
           C           QA + G E   +V NA I M++  G +D A  IFA +   +D++SWN 
Sbjct: 215 C----SSLAQLRQADECGVEEEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNV 270

Query: 360 MISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN- 415
           M++ YA    G  A++   +M+  G  PD  T+ + L +    EMVE    IH  + +  
Sbjct: 271 MMAGYANAGRGDEAVVLLRQMEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQS 330

Query: 416 ------GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPV 469
                  + TN  V  +L S YA+   I +A  +F  M  RN+++WN +I  +  +G   
Sbjct: 331 RDTPALSLRTNAVVGCSLCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRAR 390

Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
             L  F  +    ++PD  TL   L +CA     R G Q+HG+ L+  L S  +L NA +
Sbjct: 391 LALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLRSA-ALDNAAV 449

Query: 530 TLYAKCGDLDCSLRVFNMM-IEKDTI-SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKP 587
            +YAK G +  +  VF  M  ++ TI SW+A+++AYA  G  +EA   F AMQ  G ++P
Sbjct: 450 NMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREG-VRP 508

Query: 588 DQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
           +  T  ++L ACSHAG++  G   F SM  DYG  P E+H  C++D+LGRAG++++A R+
Sbjct: 509 NHVTLISILGACSHAGMLQAGCSCFASMAADYGVWPREEHTGCVVDMLGRAGWVEQAHRL 568

Query: 648 I--NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE-QDKPSVYVLLSN 699
           +  +       +  W A+  AC+  G+   G  +A  L+ R  Q   + YV LSN
Sbjct: 569 VQRSGAGGGGDAQAWMAVLGACSQQGDTLRGTCVASSLISRHPQAAAAAYVALSN 623



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 265/535 (49%), Gaps = 46/535 (8%)

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-L 283
           V+N LI MY  CG V +A  VF   +    + +S+N ++   A+ G    AL  FR M L
Sbjct: 42  VLNHLINMYGKCGRVEEARAVFASMEHP--NLVSWNTIIAAHAAGGDGRGALAVFRAMQL 99

Query: 284 VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
            AS+ P  ++F SV +AC   R    +HA     GF     +  + ITMY+ CG I++A 
Sbjct: 100 EASVVPDRVSFTSVANACGSAREARIIHASVAARGFLDDVIIGTSLITMYAKCGSIEDAR 159

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFI 402
           ++F  + E++ VSWN M+S Y+Q   G   +  +  M   G++P+  T   ++ A S   
Sbjct: 160 LVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACSSLA 219

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLING 461
           ++ +         G+   + V NA I+ +AK   + +A  IF +M + R++I+WN ++ G
Sbjct: 220 QLRQADEC-----GVEEEVAVRNACINMHAKRGDVDRAAAIFASMVAARDVISWNVMMAG 274

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG-YVLKNNLIS 520
           +   G   + +    ++      PD  T    L++C +   + HG+ IHG  VL++    
Sbjct: 275 YANAGRGDEAVVLLRQMEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQSRDTP 334

Query: 521 KMSL------GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
            +SL      G ++ ++YA+CG +D +  VF  M +++ +SWNA+I AYAQHG  + A++
Sbjct: 335 ALSLRTNAVVGCSLCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRARLALA 394

Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
            F  MQ  G +KPD  T  +VL AC+ AG    G+++    +       A D+ +  +++
Sbjct: 395 VFGGMQQHG-VKPDAITLISVLDACAGAGDARRGSQVHGWSLQLQLRSAALDNAA--VNM 451

Query: 635 LGRAGYLDEAERVINSQHIQARSD-NWWALFSACAAHGNLRLG-RIIAGLLLEREQDKPS 692
             ++G +  A  V  +   Q R+  +W A+ +A A  G+     R+     ++RE  +P+
Sbjct: 452 YAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHA--MQREGVRPN 509

Query: 693 VYVLLSNIYAAA-------------------GLW---EEAANIRELLKRTGVIKQ 725
              L+S + A +                   G+W   E    + ++L R G ++Q
Sbjct: 510 HVTLISILGACSHAGMLQAGCSCFASMAADYGVWPREEHTGCVVDMLGRAGWVEQ 564



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 231/501 (46%), Gaps = 57/501 (11%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  +A  +  G  + AL +F  +     + PD  S ++   AC + R A       
Sbjct: 71  LVSWNTIIAAHAAGGDGRGALAVFRAMQLEASVVPDRVSFTSVANACGSAREA------- 123

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
                            I+     AR  +            DV   T+ ++   K G ++
Sbjct: 124 ----------------RIIHASVAARGFLD-----------DVIIGTSLITMYAKCGSIE 156

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
            A  VFD M +R+   +NAM++G +++G+    + LFR M +  V+ +  +   V++ C 
Sbjct: 157 DARLVFDSMAERNEVSWNAMLSGYSQHGHGAQLLHLFRAMLQGGVQPNAVTLLPVVNACS 216

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
           +  L   RQ      + G    V+V NA I M+   G+V  A  +F        D IS+N
Sbjct: 217 S--LAQLRQ----ADECGVEEEVAVRNACINMHAKRGDVDRAAAIFASMVAAR-DVISWN 269

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS 317
           VMM G A+ GR +EA++  R M      P  +T+V+ ++AC    +   G  +H + +  
Sbjct: 270 VMMAGYANAGRGDEAVVLLRQMEQHGFHPDRVTYVNFLNACDKAEMVEHGRSIHGRIVLQ 329

Query: 318 GFE--AYTSVSNAAI-----TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
             +  A +  +NA +     +MY+ CG IDEA  +FA ++++++VSWN MI  YAQ    
Sbjct: 330 SRDTPALSLRTNAVVGCSLCSMYARCGSIDEAAAVFAGMEQRNVVSWNAMIGAYAQHGRA 389

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNAL 427
           R A+  +  MQ  G++PD  T  S+L   A +G       +H +  +   + +  + NA 
Sbjct: 390 RLALAVFGGMQQHGVKPDAITLISVLDACAGAGDARRGSQVHGW-SLQLQLRSAALDNAA 448

Query: 428 ISAYAKNERIKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
           ++ YAK+ R+  A ++F  M    R I++W+ ++  +   G   +  + F  +    +RP
Sbjct: 449 VNMYAKSGRVAAAREVFEAMDAQRRTIMSWSAMVAAYAGVGHAEEAFRLFHAMQREGVRP 508

Query: 486 DEYTLSVALSSCARISSLRHG 506
           +  TL   L +C+    L+ G
Sbjct: 509 NHVTLISILGACSHAGMLQAG 529


>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
 gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  301 bits (771), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 170/511 (33%), Positives = 278/511 (54%), Gaps = 12/511 (2%)

Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
           NA+++MY  CG  VDA KVF+E      D +S+   + G AS G   EA+  FR +L   
Sbjct: 13  NAVMSMYARCGREVDAIKVFDEIAE--PDVVSWTERI-GTASDGH--EAVELFRIVLSLG 67

Query: 287 LRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEAC 343
           L  +E T ++V+S     +    G Q+ A   K+G+    SVSNA ++MY  CG+I +AC
Sbjct: 68  LDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDAC 127

Query: 344 MIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSG 400
            +F  +  +D VSWN++IS  ++      A+  + +M+ + ++P   T  S+L   ++S 
Sbjct: 128 RVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSN 187

Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
             + V  IH+ V   G + ++ + + LI+AY +   + ++ ++F  +   N++  NT+I 
Sbjct: 188 NTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMIT 247

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
            F+  G+    L  +  +     + D  T S+ L +C+ I+ ++ G+ +H  VLK     
Sbjct: 248 TFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQ 307

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              + +++I +Y KCG +  + + F         +WNA++  YA HG  +E    F  M 
Sbjct: 308 DSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMS 367

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G I+PD+ T+  VLS+C H GLV +     DSM   +G IP  +H +CM+DLLGR G 
Sbjct: 368 QFG-IEPDEITYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGL 426

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNI 700
           L++A++ I+   IQ     W  L SAC  HG++ LGR+ A  LLE   +  S Y+LLSN+
Sbjct: 427 LEDAKKTIDHMPIQPDVHIWQILLSACNIHGHVELGRVAARKLLEIHPENESAYILLSNL 486

Query: 701 YAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           YA+ G+W     +R+ +K   + K+PG SWI
Sbjct: 487 YASVGMWNAVGRLRKEMKEKNLRKEPGSSWI 517



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 224/484 (46%), Gaps = 45/484 (9%)

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
           H +N ++S+Y      V   +VF EI  PDV SWT  +                      
Sbjct: 10  HFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI---------------------- 47

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDAGLLEFGRQLH 211
                     G   +G+E   + LFR +  L +  + Y+  +VLS +     L  G+Q+ 
Sbjct: 48  ----------GTASDGHE--AVELFRIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQ 95

Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
           +L  K+G+  +VSV NAL++MY  CG + DAC+VF      + D +S+N ++   +  G 
Sbjct: 96  ALCHKTGYFQVVSVSNALVSMYGKCGQICDACRVFYNM--IIRDSVSWNSLISACSENGF 153

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
           V +AL  F  M   SL+P+  T  S++ A       +   Q+H+  +K GF    S+ + 
Sbjct: 154 VNQALEVFYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISC 213

Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
            IT Y  C  +DE+  +FA + + ++V  NTMI+T+ +      A+  Y  + S+  + D
Sbjct: 214 LITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVD 273

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
             TF  +L +   I  +++   +H+ V   G   +  V +++I  Y K   I QA + F 
Sbjct: 274 SRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFR 333

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
           + S  ++  WN ++ G+  +G   +    F+++    + PDE T    LSSC     ++ 
Sbjct: 334 SSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEITYLGVLSSCCHGGLVKE 393

Query: 506 GKQIHGYVLK-NNLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAY 563
            +     + + + +I  +     MI L  + G L D    + +M I+ D   W  L+SA 
Sbjct: 394 ARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDHMPIQPDVHIWQILLSAC 453

Query: 564 AQHG 567
             HG
Sbjct: 454 NIHG 457



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 183/349 (52%), Gaps = 9/349 (2%)

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
           SNA ++MY+ CG+  +A  +F  + E D+VSW   I T +    G  A+  +  + S+G+
Sbjct: 12  SNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIGTASD---GHEAVELFRIVLSLGL 68

Query: 386 RPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
             +E+T  ++L+  G   F+   + I A     G    + VSNAL+S Y K  +I  A +
Sbjct: 69  DVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMYGKCGQICDACR 128

Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
           +F+NM  R+ ++WN+LI+    NGF  Q L+ F ++    L+P  +TL+  L + +  ++
Sbjct: 129 VFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELSLQPTIHTLASILEAVSNSNN 188

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
            +   QIH  V+K   +  +S+ + +IT Y +C  +D S RVF  + + + +  N +I+ 
Sbjct: 189 TKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHLNTMITT 248

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           + + G   +A++ ++ +  + R K D  TF+ +L ACS    +  G R   S+V   GF 
Sbjct: 249 FVRAGYYTDALALYQTIWSLHR-KVDSRTFSIILKACSAITDMQLG-RAVHSLVLKTGFD 306

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
                 S ++D+  + G + +AE+   S  + + +  W A+    A HG
Sbjct: 307 QDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLA-AWNAMMMGYAHHG 354



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 211/471 (44%), Gaps = 47/471 (9%)

Query: 35  GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
           GH  +A+ LF +I  S  L  + Y+L   L+    ++    G Q+ A   + G      V
Sbjct: 53  GH--EAVELF-RIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSV 109

Query: 95  ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
           +N ++S+Y     +    RVF  +   D  SW + +SAC++ G V+ A EV         
Sbjct: 110 SNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEV--------- 160

Query: 155 PVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQLHSL 213
                                 F +M +L ++   ++ AS+L +V ++   +   Q+HSL
Sbjct: 161 ----------------------FYQMRELSLQPTIHTLASILEAVSNSNNTKQVIQIHSL 198

Query: 214 VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE 273
           V K GF   VS+++ LIT Y  C ++ ++ +VF E       H+  N M+      G   
Sbjct: 199 VVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEIDKVNLVHL--NTMITTFVRAGYYT 256

Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAI 330
           +AL  ++ +     +    TF  ++ AC      ++G  VH+  +K+GF+  + V ++ I
Sbjct: 257 DALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRAVHSLVLKTGFDQDSFVESSVI 316

Query: 331 TMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEF 390
            +Y  CG I +A   F       + +WN M+  YA     +     + +M   GI PDE 
Sbjct: 317 DIYCKCGSIGQAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEVFDLFNKMSQFGIEPDEI 376

Query: 391 TFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHN 446
           T+  +L+S    G + E    + +   ++GII +++    +I    +   ++ A +   +
Sbjct: 377 TYLGVLSSCCHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRVGLLEDAKKTIDH 436

Query: 447 MSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           M  + ++  W  L++   ++G    G     +LL  E+ P+  +  + LS+
Sbjct: 437 MPIQPDVHIWQILLSACNIHGHVELGRVAARKLL--EIHPENESAYILLSN 485



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 160/328 (48%), Gaps = 42/328 (12%)

Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGL 472
           F+ G  +++  SNA++S YA+  R   A ++F  ++  ++++W   I G   +G   + +
Sbjct: 3   FLRG--SSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERI-GTASDGH--EAV 57

Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLY 532
           + F  +L   L  +EYTL   LS    +  L  GKQI     K      +S+ NA++++Y
Sbjct: 58  ELFRIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMY 117

Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
            KCG +  + RVF  MI +D++SWN+LISA +++G   +A+  F  M+++  ++P   T 
Sbjct: 118 GKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRELS-LQPTIHTL 176

Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV----- 647
            ++L A S++       +I  S+V   GF+     +SC++   GR   +DE++RV     
Sbjct: 177 ASILEAVSNSNNTKQVIQI-HSLVVKCGFMFDVSMISCLITAYGRCNSMDESKRVFAEID 235

Query: 648 -----------------------------INSQHIQARSDNWWALFSACAAHGNLRLGRI 678
                                        I S H +  S  +  +  AC+A  +++LGR 
Sbjct: 236 KVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSAITDMQLGRA 295

Query: 679 IAGLLLEREQDKPS-VYVLLSNIYAAAG 705
           +  L+L+   D+ S V   + +IY   G
Sbjct: 296 VHSLVLKTGFDQDSFVESSVIDIYCKCG 323



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 112/273 (41%), Gaps = 51/273 (18%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+ LN  +    R+G+Y DAL L+  I S H+ K D  + S  L AC+ + +   G  +H
Sbjct: 239 LVHLNTMITTFVRAGYYTDALALYQTIWSLHR-KVDSRTFSIILKACSAITDMQLGRAVH 297

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           +  L+ G      V ++++ +Y                                K G + 
Sbjct: 298 SLVLKTGFDQDSFVESSVIDIY-------------------------------CKCGSIG 326

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENG-YEDIGIGLFREMHKLDVRRDNYSFASVL-SV 198
            A + F       L  +NAM+ G   +G Y+++   LF +M +  +  D  ++  VL S 
Sbjct: 327 QAEKAFRSSSMNSLAAWNAMMMGYAHHGCYQEV-FDLFNKMSQFGIEPDEITYLGVLSSC 385

Query: 199 CDAGLLEFGR-------QLHSLVTK-SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           C  GL++  R       +LH ++     ++C++ ++  +       G + DA K  +   
Sbjct: 386 CHGGLVKEARHYLDSMFELHGIIPHLEHYACMIDLLGRV-------GLLEDAKKTIDHMP 438

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
                HI + +++      G VE   +  R +L
Sbjct: 439 IQPDVHI-WQILLSACNIHGHVELGRVAARKLL 470


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 303/552 (54%), Gaps = 13/552 (2%)

Query: 192 FASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVS-VVNALITMYFNCGNVVDACKVFEEA 249
            AS+L  C  AG L  GR LH+ +  SG +   + + N LITMY +C ++  A ++F   
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 250 KGYVCDHISYNVMMDGLASV---GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
                + +S+  ++ GL+          A    R   VA  R +  +     +A   P  
Sbjct: 83  PRR--NAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLP 140

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+H   ++ GF+    V++    MYS CG + EAC +F ++ +KD V+W  MI  YA+
Sbjct: 141 GAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 200

Query: 367 RNLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQ 422
                +A+L++ +M+  G +  D+  F S+L++SG ++   + + IH  V   G    + 
Sbjct: 201 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVA 260

Query: 423 VSNALISAYAKNERIKQAYQIFH-NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
           V NALI  YAK+  ++ A ++   +    N+++  ++I+G++      + L  + EL   
Sbjct: 261 VRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 320

Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
            + P+E+T S  +  CA  + L  G Q+H  V+K +LI    +G+ ++ +Y KCG +  S
Sbjct: 321 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLS 380

Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
           +++FN +  +  I+WNA+I+ +AQHG G+EA+  F  M   G I+P+   F ++L+ACSH
Sbjct: 381 MQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG-IRPNHIAFVSLLTACSH 439

Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           AGLVD+G + F SM   +G  P E+H SC++D  GRAG LDEA + I+   I+  +  W 
Sbjct: 440 AGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWC 499

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           +L  AC   G+  LG + A  L++ E     ++V LS IYA+ G WE+   +R+L++ + 
Sbjct: 500 SLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDSR 559

Query: 722 VIKQPGCSWIGS 733
           + K PG SW+ S
Sbjct: 560 IKKLPGFSWVDS 571



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 190/375 (50%), Gaps = 19/375 (5%)

Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRRDNYSF 192
           +K G +  AC VFD+MP +D   + AMI G  +NG  +  +  FR+M +   V  D + F
Sbjct: 168 SKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVF 227

Query: 193 ASVLSVCDAGLLEFG---RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-E 248
            SVLS   +G L+ G   + +H  VTK+GF   V+V NALI MY    +V  A +V + +
Sbjct: 228 CSVLSA--SGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKID 285

Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV-- 306
             G+  + +S   M+DG      VEEAL+ + ++    + P+E TF S++  C    +  
Sbjct: 286 PGGW--NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLE 343

Query: 307 -GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
            G Q+HAQ +K+     + V +  + MY  CG I  +  +F  ++ +  ++WN +I+ +A
Sbjct: 344 QGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFA 403

Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNI 421
           Q   GR AI A+  M   GIRP+   F SLL +   +G + E ++  ++    +GI    
Sbjct: 404 QHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKE 463

Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLM 480
           +  + +I  Y +  R+ +AY+    M  + N   W +L+    + G    G      L+ 
Sbjct: 464 EHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLM- 522

Query: 481 SELRPDEYTLSVALS 495
            +L P    + V+LS
Sbjct: 523 -KLEPGNTGIHVSLS 536



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 473 QHFSELLMSELRPDEYT---LSVALSSCARISSLRHGKQIHG-YVLKNNLISKMSLGNAM 528
           +++ + L     PD  T   L+  L SC R   LR G+ +H   VL     +   L N +
Sbjct: 3   KYWGQRLWRPPAPDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHL 62

Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
           IT+Y+ C DL  +LR+F  M  ++ +SW  L+S  +Q+
Sbjct: 63  ITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQN 100



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/163 (22%), Positives = 80/163 (49%), Gaps = 12/163 (7%)

Query: 38  QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
           ++AL ++V++     ++P+ ++ S+ +  CA       G QLHA  ++  L     V +T
Sbjct: 308 EEALVIYVELRR-QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGST 366

Query: 98  ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PD 151
           ++ +Y     +    ++F+EI+     +W   ++   + GH   A + FD+M      P+
Sbjct: 367 LVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPN 426

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLF---REMHKLDVRRDNYS 191
                + +++T C+  G  D G+  F   +E H ++ + ++YS
Sbjct: 427 H--IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYS 467



 Score = 39.3 bits (90), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 60  LSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEI 118
           L++ L +C    +   G  LHA  + +G  A    +AN ++++Y +  DL S  R+F+ +
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 119 QNPDVYSWTTFLSACTK 135
              +  SWTT +S  ++
Sbjct: 83  PRRNAVSWTTLVSGLSQ 99


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 277/516 (53%), Gaps = 10/516 (1%)

Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
           V V  +L+ MY   G V DA +VF+       +  S++ M+ G A+    EEA   FR M
Sbjct: 47  VYVCTSLLNMYCKLGIVSDARRVFDGMPQR--NSFSWSTMVAGYAAEKCSEEAFDLFRLM 104

Query: 283 LV-ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK 338
           L       SE    +V+SA   P    +G Q+H   +K G   + SV N+ +TMY+  G 
Sbjct: 105 LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGC 164

Query: 339 IDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLA 397
           +  A  +F   +E++ ++W+ MI+ YAQ     SA+  + +M + G  P EFTF G L A
Sbjct: 165 MGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNA 224

Query: 398 SS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
           SS  G + + +  H  +   G    I V +AL+  YAK   I  A + F  +   +I+ W
Sbjct: 225 SSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLW 284

Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
             +++G + NG   + L  ++ +    + P + T++  L +CA I++L  GKQ+H  ++K
Sbjct: 285 TAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK 344

Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
             L     +G+A+ T+Y+KCG+L+  + VF  + ++D I+WN++IS ++Q+G G  A+  
Sbjct: 345 YGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDL 404

Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
           F+ M+  G I PD  TF  +L ACSH GLVD G   F  M  DYG  P  DH +CM+D+L
Sbjct: 405 FEEMKMEGTI-PDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDIL 463

Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
            RAG L EA+  I S  I   +  W  +  AC +  +  +G      L+E      S Y+
Sbjct: 464 SRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYI 523

Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           LLSNIYA+   W +   +R L++  GV K PGCSW+
Sbjct: 524 LLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWV 559



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 215/456 (47%), Gaps = 22/456 (4%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-----CTENGYEDIGIGL 176
           +VY  T+ L+   K+G V  A  VFD MP R+   ++ M+ G     C+E  ++     L
Sbjct: 46  NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFD-----L 100

Query: 177 FREM-HKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           FR M  +    +  +   +VLS     L L  G Q+H L+ K G    VSV N+L+TMY 
Sbjct: 101 FRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 160

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
             G +  A  VFE ++    + I+++ M+ G A  G  + A+  F  M  A   P+E TF
Sbjct: 161 KAGCMGAAFHVFESSRER--NSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTF 218

Query: 295 VSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
           V V++A        VG Q H   +K GFE    V +A + MY+ CG I +A   F +L E
Sbjct: 219 VGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYE 278

Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MI 408
            DIV W  M+S + Q      A+  Y  M   GI P + T  S L +   I  +E    +
Sbjct: 279 VDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQL 338

Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
           H  +   G+     V +AL + Y+K   ++    +F  +  R++I WN++I+GF  NG  
Sbjct: 339 HTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCG 398

Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNA 527
              L  F E+ M    PD  T    L +C+ +  +  G +    + K+  L  ++     
Sbjct: 399 NGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYAC 458

Query: 528 MITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISA 562
           M+ + ++ G L +    + ++ I+  T  W  ++ A
Sbjct: 459 MVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 494



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 37/276 (13%)

Query: 28  LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
           +   +++G    A+ +F Q+H++    P  ++    L A ++L   A G Q H   ++ G
Sbjct: 187 ITGYAQNGEADSAVSMFSQMHAA-GFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLG 245

Query: 88  LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
            +   +V + ++ +Y                                K G +  A E FD
Sbjct: 246 FEVQIYVKSALVDMY-------------------------------AKCGCIADAKEGFD 274

Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LE 205
           ++ + D+ ++ AM++G  +NG  +  + L+  M K  +     + AS L  C AG+  LE
Sbjct: 275 QLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRAC-AGIAALE 333

Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
            G+QLH+ + K G      V +AL TMY  CGN+ D   VF        D I++N ++ G
Sbjct: 334 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDR--DVIAWNSIISG 391

Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            +  G    AL  F +M +    P  +TF++++ AC
Sbjct: 392 FSQNGCGNGALDLFEEMKMEGTIPDNITFINILCAC 427



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 11/202 (5%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G +++AL L+ ++     + P   ++++ L ACA +     G QLH   ++ GL    
Sbjct: 293 QNGEHEEALTLYARM-DKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGA 351

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-D 151
            V + + ++Y    +L     VF  I + DV +W + +S  ++ G  + A ++F++M  +
Sbjct: 352 PVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 411

Query: 152 RDLP---VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS-FASVLSVCDAGLL 204
             +P    +  ++  C+  G  D G   F  M K   L  R D+Y+    +LS   AG+L
Sbjct: 412 GTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILS--RAGML 469

Query: 205 EFGRQLHSLVTKSGFSCLVSVV 226
           +  +     +T    +CL  +V
Sbjct: 470 KEAKDFIESITIDHGTCLWRIV 491


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 182/579 (31%), Positives = 299/579 (51%), Gaps = 12/579 (2%)

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
           D  ++N +I G  + G  +  +  +R M     R D ++F  V+  C   G LE GR  H
Sbjct: 71  DAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAH 130

Query: 212 SLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
           S   + G     V   N+L+  Y   G V DA +VF+     V D +++N M+DG  S G
Sbjct: 131 SAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMP--VRDIVTWNSMVDGYVSNG 188

Query: 271 RVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVS 326
               AL  FR+M     ++   +  ++ ++AC        G +VHA  ++ G E    V 
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + + MY  CG I  A  +FA +  + +V+WN MI  YA       A   +++M++ G +
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQ 308

Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            +  T  +LLA+    E       +H +V  +  + ++ +  AL+  Y+K  ++K +  I
Sbjct: 309 VEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETI 368

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
           F  M+ + +++WN +I  ++      + +  F ELL   L PD +T+S  + +   +  L
Sbjct: 369 FGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLL 428

Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
           R  +Q+H Y+++ +      + NA++ +YA+CGD+  S ++F+ M  KD ISWN +I  Y
Sbjct: 429 RQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGY 488

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
           A HG+GK A+  F  M+  G ++P+++TF +VL+ACS +G+ D+G   F+ M  DYG IP
Sbjct: 489 AIHGQGKIALEMFSEMKSNG-LQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIP 547

Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
             +H  CM DLLGRAG L E  + I S  I      W +L +A     ++ +    A  +
Sbjct: 548 QIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERI 607

Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
            E E D    YV+LS++YA AG WE+   IR  +   G+
Sbjct: 608 FELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGL 646



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 154/577 (26%), Positives = 270/577 (46%), Gaps = 50/577 (8%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKR 113
           +PD ++    +  CA L     G   H+ A+R GL                         
Sbjct: 104 RPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGL------------------------- 138

Query: 114 VFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIG 173
           V SE     VY+  + L+   K+G V  A  VFD MP RD+  +N+M+ G   NG   + 
Sbjct: 139 VGSE-----VYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALA 193

Query: 174 IGLFREMHK-LDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
           +  FREMH+ L V+ D     + L+ C  D+ L++ GR++H+ V + G    V V  +L+
Sbjct: 194 LDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQ-GREVHAYVIRHGLEQDVKVGTSLL 252

Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
            MY  CG +  A  +F          +++N M+ G A  G  EEA   F  M     +  
Sbjct: 253 DMYCKCGAIASAEGMFATMPSRTV--VTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVE 310

Query: 291 ELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
            +T +++++AC        G  VH    +S F  +  +  A + MYS  GK+  +  IF 
Sbjct: 311 VVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFG 370

Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEM 404
           ++  K +VSWN MI+ Y  + +   AI  +LE+ +  + PD FT  +++ +    G +  
Sbjct: 371 QMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQ 430

Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
              +H+++       N  V+NA++  YA+   +  + +IF  M+ +++I+WNT+I G+ +
Sbjct: 431 CRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAI 490

Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN--LISKM 522
           +G     L+ FSE+  + L+P+E T    L++C+ +S +     I   +++ +  +I ++
Sbjct: 491 HGQGKIALEMFSEMKSNGLQPNESTFVSVLTACS-VSGMADEGWIQFNLMQRDYGIIPQI 549

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGEGKEAVSCFKAMQD 581
                M  L  + GDL   L+    +    T   W +L++A     +   A     A + 
Sbjct: 550 EHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAE---YAAER 606

Query: 582 VGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVN 617
           +  ++ D      +LS+  + AG  +D  RI  SM+ 
Sbjct: 607 IFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMME 643



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 177/397 (44%), Gaps = 53/397 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL  F ++H   +++ D   +   LAAC        G ++HAY +R GL+    V  ++L
Sbjct: 193 ALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLL 252

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y                                K G +  A  +F  MP R +  +N 
Sbjct: 253 DMY-------------------------------CKCGAIASAEGMFATMPSRTVVTWNC 281

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC---DAGLLEFGRQLHSLVTK 216
           MI G   NG  +     F +M     + +  +  ++L+ C   ++ L  +GR +H  VT+
Sbjct: 282 MIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL--YGRSVHGYVTR 339

Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           S F   V +  AL+ MY   G V  +  +F +        +S+N M+          EA+
Sbjct: 340 SQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTL--VSWNNMIAAYMYKEMYNEAI 397

Query: 277 IRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
             F ++L   L P   T  +V+ A +     R   Q+H+  ++  +   T V+NA + MY
Sbjct: 398 TLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMY 457

Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
           + CG +  +  IF ++  KD++SWNT+I  YA    G+ A+  + EM+S G++P+E TF 
Sbjct: 458 ARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFV 517

Query: 394 SLL--------ASSGFIEMVEMIHAFVFINGIITNIQ 422
           S+L        A  G+I+   M   +    GII  I+
Sbjct: 518 SVLTACSVSGMADEGWIQFNLMQRDY----GIIPQIE 550



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 41/281 (14%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSS-HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
           N  +   + +G  ++A   FVQ+ +  H++  ++ +    LAACA   ++ +G  +H Y 
Sbjct: 280 NCMIGGYALNGCPEEAFDCFVQMKAEGHQV--EVVTAINLLAACAQTESSLYGRSVHGYV 337

Query: 84  LRAGLKAYPHVA--NTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
            R+  +  PHV     +L +Y     + S + +F ++ N  + SW   ++A         
Sbjct: 338 TRS--QFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAA--------- 386

Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCD 200
              ++ +M       YN  IT             LF E+    +  D ++ ++V+ +   
Sbjct: 387 --YMYKEM-------YNEAIT-------------LFLELLNQPLYPDYFTMSAVVPAFVL 424

Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
            GLL   RQ+HS + +  +     V NA++ MY  CG+VV + K+F++  G   D IS+N
Sbjct: 425 LGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK--DVISWN 482

Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
            ++ G A  G+ + AL  F +M    L+P+E TFVSV++AC
Sbjct: 483 TIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTAC 523



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 5/150 (3%)

Query: 37  YQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVAN 96
           Y +A+ LF+++  +  L PD +++S  + A   L       Q+H+Y +R        V N
Sbjct: 393 YNEAITLFLEL-LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTN 451

Query: 97  TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL-- 154
            ++ +Y    D+VS +++F ++   DV SW T +      G    A E+F +M    L  
Sbjct: 452 AVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQP 511

Query: 155 --PVYNAMITGCTENGYEDIGIGLFREMHK 182
               + +++T C+ +G  D G   F  M +
Sbjct: 512 NESTFVSVLTACSVSGMADEGWIQFNLMQR 541


>gi|449496714|ref|XP_004160205.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11290-like [Cucumis sativus]
          Length = 616

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 185/550 (33%), Positives = 290/550 (52%), Gaps = 14/550 (2%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
               +S+C  + LL+FG Q+HS + K GFS    +  AL+ MY  C ++ DA KVF+E  
Sbjct: 71  LTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISDAHKVFDEMS 130

Query: 251 GYVCDHI-SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---V 306
              C  + ++N ++ G    G    A+  F +ML   + P+  +    +  C   +   +
Sbjct: 131 ---CPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDL 187

Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
           G Q+HA ++K  F +   V    I MYS C  + ++  +F  +  K++ +W +MIS YA+
Sbjct: 188 GSQLHAMSLKLRFSSNVVVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTSMISGYAR 247

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQV 423
             L   A+    EM  + + P+  T+ SLL+S       +  + IH  +   G  +N  +
Sbjct: 248 NQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYI 307

Query: 424 SNALISAYAKNERIKQAY-QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
           +  L++AY++     + Y ++  N+   + I+WN +I GF   G   + L+ F ++   +
Sbjct: 308 AVTLVTAYSECCGSLEDYRKVCSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREK 367

Query: 483 LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSL 542
              D +T +    +    S+L  GKQIHG V K      +S+ N ++++YA+ G +  S 
Sbjct: 368 FDVDFFTFTSIFKAIGMTSALEEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSK 427

Query: 543 RVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHA 602
            VF+MM E D ISWN+L+S  A HG G+EA+  F+ M+    IKPD  +F AVL+ACSH 
Sbjct: 428 MVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTC-IKPDNTSFLAVLTACSHV 486

Query: 603 GLVDDGTRIFDSMVNDYGFIPAE-DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
           GL+D G   F  M N     P + +H + ++DL GRAG L EAE  I S  I+     + 
Sbjct: 487 GLLDKGLEYFKLMRNSELVEPPKLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYK 546

Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
           AL SAC  HGN  +    A  LLE     P+ Y++LSN     G W++AA+IR L+   G
Sbjct: 547 ALLSACLIHGNKDIAIRTAKKLLELYPYDPATYIMLSNALGRDGYWDDAASIRRLMSNRG 606

Query: 722 VIKQPGCSWI 731
           V K+PG SW+
Sbjct: 607 VKKEPGFSWM 616



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 264/578 (45%), Gaps = 46/578 (7%)

Query: 51  HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVS 110
           H   P    L+ T++ C       FG Q+H+  ++ G    P++   ++ +Y     +  
Sbjct: 62  HGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNPYIFTALVDMYGKCWSISD 121

Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYE 170
             +VF E+  P V +W                               N+++TG  + GY 
Sbjct: 122 AHKVFDEMSCPSVVTW-------------------------------NSLVTGYLQAGYP 150

Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
            + + LF EM K  +    +S +  L  C      + G QLH++  K  FS  V V   L
Sbjct: 151 LMAVSLFLEMLKKGIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNVVVGTGL 210

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY  C N+ D+ +VF+       +  ++  M+ G A      EA+   R+ML  +L P
Sbjct: 211 IDMYSKCCNLQDSRRVFDIMLNK--NVFTWTSMISGYARNQLPHEAMXLMREMLHLNLEP 268

Query: 290 SELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSS-CGKIDEACMI 345
           + +T+ S++S+  CPR      Q+H + +  G+E+   ++   +T YS  CG +++   +
Sbjct: 269 NGMTYNSLLSSFSCPRHFDKCKQIHCRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKV 328

Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
            + ++  D +SWN +I+ +    +G  A+  +++M+      D FTF S+  + G    +
Sbjct: 329 CSNIRMSDQISWNAVIAGFTNLGIGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL 388

Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E    IH  V+  G   N+ V N L+S YA++  I+ +  +F  M+  ++I+WN+L++G 
Sbjct: 389 EEGKQIHGLVYKTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGC 448

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
             +G   + +  F ++  + ++PD  +    L++C+ +  L  G +    +  + L+   
Sbjct: 449 AYHGCGEEAIDLFEKMRRTCIKPDNTSFLAVLTACSHVGLLDKGLEYFKLMRNSELVEPP 508

Query: 523 SLGN--AMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
            L +   ++ L+ + G L +    + ++ IE     + AL+SA   HG    A+   K +
Sbjct: 509 KLEHYATLVDLFGRAGKLYEAEAFIESIPIEPGISIYKALLSACLIHGNKDIAIRTAKKL 568

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
            ++    P  AT+  + +A    G  DD   I   M N
Sbjct: 569 LELYPYDP--ATYIMLSNALGRDGYWDDAASIRRLMSN 604



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 178/381 (46%), Gaps = 43/381 (11%)

Query: 33  RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
           ++G+   A+ LF+++     ++P  +SLS  L  C+ L+    G+QLHA +L+    +  
Sbjct: 146 QAGYPLMAVSLFLEMLKK-GIEPTPFSLSGGLVGCSQLQKGDLGSQLHAMSLKLRFSSNV 204

Query: 93  HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
            V   ++ +Y    +L   +RVF  + N +V++WT+                        
Sbjct: 205 VVGTGLIDMYSKCCNLQDSRRVFDIMLNKNVFTWTS------------------------ 240

Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLH 211
                  MI+G   N      + L REM  L++  +  ++ S+LS        +  +Q+H
Sbjct: 241 -------MISGYARNQLPHEAMXLMREMLHLNLEPNGMTYNSLLSSFSCPRHFDKCKQIH 293

Query: 212 SLVTKSGFSCLVSVVNALITMYFN-CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
             +   G+     +   L+T Y   CG++ D  KV    +  + D IS+N ++ G  ++G
Sbjct: 294 CRIITEGYESNNYIAVTLVTAYSECCGSLEDYRKVCSNIR--MSDQISWNAVIAGFTNLG 351

Query: 271 RVEEALIRFRDMLVASLRPSELTFVSV-----MSACLCPRVGYQVHAQAMKSGFEAYTSV 325
             EEAL  F  M          TF S+     M++ L    G Q+H    K+G+    SV
Sbjct: 352 IGEEALECFIQMRREKFDVDFFTFTSIFKAIGMTSAL--EEGKQIHGLVYKTGYTLNLSV 409

Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
            N  ++MY+  G I ++ M+F+ + E D++SWN+++S  A    G  AI  + +M+   I
Sbjct: 410 QNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAIDLFEKMRRTCI 469

Query: 386 RPDEFTFGSLLASSGFIEMVE 406
           +PD  +F ++L +   + +++
Sbjct: 470 KPDNTSFLAVLTACSHVGLLD 490



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 9/162 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +  G  ++AL  F+Q+    K   D ++ ++   A         G Q+H    
Sbjct: 341 NAVIAGFTNLGIGEEALECFIQMRR-EKFDVDFFTFTSIFKAIGMTSALEEGKQIHGLVY 399

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + G      V N ++S+Y  +  +   K VFS +   D+ SW + LS C   G  + A +
Sbjct: 400 KTGYTLNLSVQNGLVSMYARSGAIRDSKMVFSMMNEHDLISWNSLLSGCAYHGCGEEAID 459

Query: 145 VFDKM------PDRDLPVYNAMITGCTENGYEDIGIGLFREM 180
           +F+KM      PD     + A++T C+  G  D G+  F+ M
Sbjct: 460 LFEKMRRTCIKPDNT--SFLAVLTACSHVGLLDKGLEYFKLM 499



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 1/149 (0%)

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
           LL    V  +Q   +LL     P    L+  +S C + + L  G Q+H  ++K       
Sbjct: 44  LLQTHNVVDIQFLVQLLRHGSPPTPPILTKTISICTKSTLLDFGIQVHSTIIKLGFSLNP 103

Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            +  A++ +Y KC  +  + +VF+ M     ++WN+L++ Y Q G    AVS F  M   
Sbjct: 104 YIFTALVDMYGKCWSISDAHKVFDEMSCPSVVTWNSLVTGYLQAGYPLMAVSLFLEMLKK 163

Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
           G I+P   + +  L  CS     D G+++
Sbjct: 164 G-IEPTPFSLSGGLVGCSQLQKGDLGSQL 191


>gi|302775788|ref|XP_002971311.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
 gi|300161293|gb|EFJ27909.1| hypothetical protein SELMODRAFT_61689 [Selaginella moellendorffii]
          Length = 604

 Score =  301 bits (771), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 192/601 (31%), Positives = 322/601 (53%), Gaps = 29/601 (4%)

Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
           + D Y     +    K G+V+ A  VF ++ DR++  +  ++  CTENG  ++ + LFR 
Sbjct: 13  DQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDRNVFSWTILMDACTENGLSELTLELFRR 72

Query: 180 MHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVS-----VVNALITMY 233
           M    +R D  ++  VL  C +   LE GRQ+ +L+     SC  S     V+ +L+ +Y
Sbjct: 73  MLLEGIRPDRVAYLGVLKACSELRYLEEGRQVENLLVSG--SCFPSSLDAAVLTSLLNLY 130

Query: 234 FNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGLAS---VGRVEEALIRFRDMLVASLR 288
            +CG++ +A +VFE    K  VC    +N M+   A     GR  + L  F+ ML+  + 
Sbjct: 131 ASCGSLENARRVFESFHEKDLVC----WNSMLAAYAKHEKTGR--QTLEFFQKMLLEGVA 184

Query: 289 PSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
            + ++F  V+ AC  P +  Q   +H Q   SG  A + ++ A + MYS CG++  A  +
Sbjct: 185 ANVVSFTCVVGACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGRLGSAWEL 244

Query: 346 FARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA---SSGF 401
           F R+  K  +VSWN++++ +AQR      +  +  +Q  G++P   T  S+L    S+  
Sbjct: 245 FQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLGGCCSTQA 304

Query: 402 IEMVEMIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
           + +VE I+  V   G I+ ++ +  AL+++     ++  A  +F+ ++  N  +WNT+I 
Sbjct: 305 LRIVEHIYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYRLNRWNAASWNTMIA 364

Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
           G++ +GF +Q L    E+ +  ++P+  T    + +C+ ++ L + K +H  +  + +  
Sbjct: 365 GYVQHGFDLQALHLLYEMDLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHERISASKVGL 424

Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
              LG A++++YA C  L+ S RVF  +  +DT+SWNA+I+AYA+ G   + +  F+ M 
Sbjct: 425 DTVLGTAIVSMYANCDSLEDSRRVFESLDLRDTVSWNAVIAAYAEQGHAYQVLESFRCMI 484

Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
             G +KPD  TF  VL ACSHAG V+    +F+S+  D+  +PA  H  C++DLLGRAG+
Sbjct: 485 HQG-LKPDNDTFIFVLHACSHAGSVEQACDLFNSITRDHNLLPAIQHYVCVIDLLGRAGW 543

Query: 641 LDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSV-YVLLSN 699
           L+ A  +IN    Q  S  W  L  AC  +G+   G   AG +   EQ +    YVLLSN
Sbjct: 544 LENAHELINRMPYQPNSLAWSTLLGACGMYGDTDRGTHAAGQVTTIEQGQHGASYVLLSN 603

Query: 700 I 700
           I
Sbjct: 604 I 604



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 17/421 (4%)

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R  H  + + G      + N L+ MY  CG V +A  VF+  K    +  S+ ++MD   
Sbjct: 1   RAAHRELQRLGIDQDTYLGNLLVQMYGKCGYVEEAMAVFQRIKDR--NVFSWTILMDACT 58

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTS 324
             G  E  L  FR ML+  +RP  + ++ V+ AC   R    G QV    + SG    +S
Sbjct: 59  ENGLSELTLELFRRMLLEGIRPDRVAYLGVLKACSELRYLEEGRQVE-NLLVSGSCFPSS 117

Query: 325 VSNAAIT----MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ-RNLGRSAILAYLE 379
           +  A +T    +Y+SCG ++ A  +F    EKD+V WN+M++ YA+    GR  +  + +
Sbjct: 118 LDAAVLTSLLNLYASCGSLENARRVFESFHEKDLVCWNSMLAAYAKHEKTGRQTLEFFQK 177

Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNER 436
           M   G+  +  +F  ++ +    E+ E   +IH  +  +G++ +  ++ AL++ Y+K  R
Sbjct: 178 MLLEGVAANVVSFTCVVGACSRPELSEQGTVIHEQITCSGLVADSFLAAALVNMYSKCGR 237

Query: 437 IKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
           +  A+++F  +  + ++++WN+++          + L+ F  L +  L+P   TL   L 
Sbjct: 238 LGSAWELFQRVDVKMSLVSWNSILAAHAQRADLTKVLEIFGMLQLEGLKPSGVTLISVLG 297

Query: 496 SCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
            C    +LR  + I+  V +   IS  + LG A++T    CG L  +  +F  +   +  
Sbjct: 298 GCCSTQALRIVEHIYERVAQEGEISHDLFLGTALMTSLCDCGKLADAESLFYRLNRWNAA 357

Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
           SWN +I+ Y QHG   +A+     M D+  IKP+  TF  ++ ACS   ++ +   + + 
Sbjct: 358 SWNTMIAGYVQHGFDLQALHLLYEM-DLEGIKPNVVTFLGIVDACSSLAVLGNAKAVHER 416

Query: 615 M 615
           +
Sbjct: 417 I 417


>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
          Length = 804

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 206/698 (29%), Positives = 351/698 (50%), Gaps = 51/698 (7%)

Query: 53  LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVA---NTILSLYKNARDLV 109
           ++ D Y+ S  L ACA  R    G  +HA+ LR   ++ P  A   N++L+LY +     
Sbjct: 101 VRSDHYTYSAALTACARSRRLRLGRSVHAHMLRRA-RSLPDTAVLRNSLLNLYAS----- 154

Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
                                S   +   VD    +FD MP R++  +N +     + G 
Sbjct: 155 ---------------------SVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGR 193

Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCL--VSVVN 227
               + LF  M +   R    SF ++     A    +  QL+ L+ K G   +  + VV+
Sbjct: 194 PQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPFQLYGLLVKYGVEYINDLFVVS 253

Query: 228 ALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
           + I M+   G+V  A +VF+ A     +   +N M+ G    G+  EA+  F  +L +  
Sbjct: 254 SAIDMFSEFGDVQSARRVFDRAAKKNTE--VWNTMITGYVQNGQFSEAIDLFSKILGSRE 311

Query: 288 RPSEL-TFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV-SNAAITMYSSCGKIDEA 342
            P ++ TF+S ++A    +   +G Q+H   +K        +  NA + MYS CG +  A
Sbjct: 312 VPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTA 371

Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS--- 399
             +F RL EKDIV+WNTM++ + Q +     +L   EMQ  G   D  T  ++L++S   
Sbjct: 372 FDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNT 431

Query: 400 GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNT 457
           G +++ +  H ++  +GI     + + LI  YAK+ R++ A ++F +   + R+ +TWN 
Sbjct: 432 GDLQIGKQAHGYLIRHGI-EGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNA 490

Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS-LRHGKQIHGYVLKN 516
           +I G+  +G P + +  F  +L + L P   TL+  L +C  +   +  GKQIH + ++ 
Sbjct: 491 MIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRR 550

Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
            L + + +G A+I +Y+KCG++  +  VF  M  K T+++  +IS   QHG GK+A++ F
Sbjct: 551 CLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALF 610

Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLG 636
            +MQ+ G +KPD  TF + +SAC+++GLVD+G  ++ SM + +G      H  C+ DLL 
Sbjct: 611 NSMQEKG-LKPDAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLA 668

Query: 637 RAGYLDEAERVINSQHIQAR-SDNWWALFSACAAHGNLRLGRIIAGLLL--EREQDKPSV 693
           +AG ++EA   I     +      W +L ++C A G   L +++   LL  E++      
Sbjct: 669 KAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGY 728

Query: 694 YVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            VLLS + AA   W  A ++R+ ++  G+ K+ G SWI
Sbjct: 729 SVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 166/649 (25%), Positives = 303/649 (46%), Gaps = 69/649 (10%)

Query: 135 KMGHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGI---GLFREMHKLDVRRDN 189
           K G +D+A  +  +   R  P    NA++    +   ++  +    L     +  VR D+
Sbjct: 46  KQGRLDHARRLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAARPPVRSDH 105

Query: 190 YSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV--NALITMY-----FNCGNVVD 241
           Y++++ L+ C  +  L  GR +H+ + +   S   + V  N+L+ +Y     +    V  
Sbjct: 106 YTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDV 165

Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
             ++F+       + +S+N +       GR +EAL  F  ML    RP+ ++FV++  A 
Sbjct: 166 VRRLFDAMPKR--NVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAA 223

Query: 302 LC--PRVGYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
           +   P   +Q++   +K G E      V ++AI M+S  G +  A  +F R  +K+   W
Sbjct: 224 VADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVW 283

Query: 358 NTMISTYAQRNLGRSAILAYLE-MQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVF 413
           NTMI+ Y Q      AI  + + + S  +  D  TF S L +   S  + + + +H ++ 
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYL- 342

Query: 414 INGIITNIQV--SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
           I G+   + V   NAL+  Y++   ++ A+ +F  +  ++I+TWNT++  F+ N F ++G
Sbjct: 343 IKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEG 402

Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
           L    E+  S    D  TL+  LS+ +    L+ GKQ HGY++++  I    L + +I +
Sbjct: 403 LLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHG-IEGEGLESYLIDM 461

Query: 532 YAKCGDLDCSLRVFNMM--IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
           YAK G ++ + RVF+     ++D ++WNA+I+ Y Q G+ ++A+  F+AM + G ++P  
Sbjct: 462 YAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAG-LEPTS 520

Query: 590 ATFTAVLSACSHAG----------------LVDDGTRIFDSMVNDY---GFIPAEDHL-- 628
            T  +VL AC   G                 +D    +  ++++ Y   G I   +++  
Sbjct: 521 VTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFG 580

Query: 629 ----------SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
                     + M+  LG+ G+  +A  + NS   +    +     SA +A      G +
Sbjct: 581 GMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACN--YSGLV 638

Query: 679 IAGLLLEREQDK------PSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
             GL L R  D       P  +  ++++ A AG  EEA    E L   G
Sbjct: 639 DEGLALYRSMDSFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEG 687



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 212/471 (45%), Gaps = 50/471 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +    ++G + +A+ LF +I  S ++  D+ +  + L A +  ++ + G QLH Y +
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 343

Query: 85  RAGLKAYPHV-ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
           +   +  P +  N ++ +Y    ++ +   +F  +   D+ +W                 
Sbjct: 344 KGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTW----------------- 386

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAG 202
                         N M+T   +N ++  G+ L  EM K     D+ +  +VLS   + G
Sbjct: 387 --------------NTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTG 432

Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
            L+ G+Q H  + + G      + + LI MY   G V  A +VF+  K    D +++N M
Sbjct: 433 DLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAM 491

Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP-----RVGYQVHAQAMKS 317
           + G    G+ E+A++ FR ML A L P+ +T  SV+ AC  P       G Q+H  A++ 
Sbjct: 492 IAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC-DPVGGGVYSGKQIHCFAVRR 550

Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
             +    V  A I MYS CG+I  A  +F  +  K  V++ TMIS   Q   G+ A+  +
Sbjct: 551 CLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALF 610

Query: 378 LEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKN 434
             MQ  G++PD  TF S +++   SG ++    ++  +   GI    Q    +    AK 
Sbjct: 611 NSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATPQHHCCVADLLAKA 670

Query: 435 ERIKQAYQIFHNMSPRN--IITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
            R+++AY+    +      +  W     G LL     QG Q  ++L+  +L
Sbjct: 671 GRVEEAYEFIEGLGEEGNFVAIW-----GSLLASCKAQGKQELAKLVTKKL 716


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 197/746 (26%), Positives = 373/746 (50%), Gaps = 43/746 (5%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +  +++A+ +  ++     ++P+  +    +  C ++ +   G+ LH
Sbjct: 205 LISWNAMVSGYSLNECFREAVEMLQEMQQG-GMRPNASTFVGIVGMCGSVGDRDVGDSLH 263

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+AL+ G+     + + ++++Y    DL S + VF      D+ S+ + +SA  +     
Sbjct: 264 AFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHHIWK 323

Query: 141 YACEVFDKMP----DRDLPVYNAMITGCTE----NGYEDIG------------------I 174
            A E+F  M       +L    +++  C++    N  E +                   +
Sbjct: 324 EAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMIIKLGLAEHVSVASALV 383

Query: 175 GLFREMHKLD---------VRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVS 224
            ++ ++ KLD         V  D  +  +V+S C     L   + +H+   ++ F    S
Sbjct: 384 SMYSKLGKLDSSLLLFCCCVAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHS 443

Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
           V+NAL+ MY +C ++  +  +F++ +  +   IS+N M+ G A +G  +  LI F  M  
Sbjct: 444 VMNALLAMYADCRDISTSHTLFQKMEVRML--ISWNTMISGFAEIGDSDTCLILFCQMFH 501

Query: 285 ASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE 341
             ++   +T + ++S+   P    VG  VH+ A+KSG  +  S++NA ITMY++CG ++ 
Sbjct: 502 EEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEA 561

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
              +F     ++ +++N ++S Y + N+    +  + +M     +P+  T  +LL     
Sbjct: 562 GQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVCQS 621

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
               + IH++   N       +  + +  Y++   I+   +IF  +  RN+I WN  ++ 
Sbjct: 622 QLQGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSA 681

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK 521
            +        +  F  +L   +RPD  T+   +S+C+++ +      I   +L+    + 
Sbjct: 682 CVQCKQADMVVDCFKHMLFLNVRPDAVTMLALISACSQLGNAYFAACIMAVILQKGFSTN 741

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
           + + NA+I  +++CG +  +  +F+  +EKD+++W A+I+AY+ HG G+ A+  F  M D
Sbjct: 742 ILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMMID 801

Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL 641
            G + PD  TF ++LSAC+H GLV+ G  +F S+  DYG  P  +H +CM+DLLGR G+L
Sbjct: 802 SG-VDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYACMVDLLGRTGHL 860

Query: 642 DEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIY 701
           DEA  V+ S   +   +   +L  AC  HGN ++G  I  LL++ E  K   YV+LSNIY
Sbjct: 861 DEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIKSEYGKSRSYVMLSNIY 920

Query: 702 AAAGLWEEAANIRELLKRTGVIKQPG 727
           A+AG W +   +R  ++  G+ K  G
Sbjct: 921 ASAGKWSDCEQLRLDMEAKGLRKNVG 946



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 174/707 (24%), Positives = 306/707 (43%), Gaps = 109/707 (15%)

Query: 17  SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
           S+  +  LN+++   S  G +++ LHL+ ++        D ++    + AC  +     G
Sbjct: 102 SRPAVYSLNLAVRCFSDHGFHRELLHLYRELCC---FGSDNFTFPPVIRACTAVSCLRLG 158

Query: 77  NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
            ++H   LR G      V   +L LY                                K 
Sbjct: 159 REMHCRVLRTGHGGNVGVQTALLDLY-------------------------------AKA 187

Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
           G +D +  VFD M  RDL  +NAM++G + N      + + +EM +  +R +  +F  ++
Sbjct: 188 GQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIV 247

Query: 197 SVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
            +C + G  + G  LH+   K G     S+ +ALITMY    ++  +  VF+     V D
Sbjct: 248 GMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHP--VKD 305

Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHA 312
            +S+N M+         +EA   FR M   ++RP+ +T VSV+ +C        G  VH 
Sbjct: 306 LVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHG 365

Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
             +K G   + SV++A ++MYS  GK+D + ++F                          
Sbjct: 366 MIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLFC------------------------- 400

Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALIS 429
                       + PD  T  ++++   +   + M + IHA+   N   +   V NAL++
Sbjct: 401 ----------CCVAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLA 450

Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
            YA    I  ++ +F  M  R +I+WNT+I+GF   G     L  F ++   E++ D  T
Sbjct: 451 MYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVT 510

Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMI 549
           L   +SS +       G+ +H   +K+   S +SL NA+IT+YA CG ++   ++F+   
Sbjct: 511 LIGLISSFSVPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCC 570

Query: 550 EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS--------H 601
            ++TI++NAL+S Y ++    + +  F  M +    KP+  T   +L  C         H
Sbjct: 571 SRNTITYNALMSGYRKNNISAKILPLFYQMVENDE-KPNLVTLLNLLPVCQSQLQGKCIH 629

Query: 602 AGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYL------------DEAE 645
           +  V + TR    +F S +  Y      ++ S +  L+G    +             +A+
Sbjct: 630 SYAVRNFTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGARNLIVWNAFLSACVQCKQAD 689

Query: 646 RVINS-QH---IQARSD--NWWALFSACAAHGNLRLGRIIAGLLLER 686
            V++  +H   +  R D     AL SAC+  GN      I  ++L++
Sbjct: 690 MVVDCFKHMLFLNVRPDAVTMLALISACSQLGNAYFAACIMAVILQK 736



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 175/377 (46%), Gaps = 18/377 (4%)

Query: 278 RFRDMLVASLRP-SELTFVSVMSACLCPRVGY------QVHAQAMKSGFEAYTSVSNAAI 330
           ++R    AS  P SE T + V++  L  R  Y      ++HA    +G    T V    +
Sbjct: 23  QYRAKSFASSSPTSETTPLKVLTGLL--RDAYSLKCLRELHAHLAVAGAIQDTFVVTGLV 80

Query: 331 TMYSSCGKIDEACMIFARL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
             Y   GK   A ++FA        + S N  +  ++     R  +  Y E+   G   D
Sbjct: 81  ERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFSDHGFHRELLHLYRELCCFG--SD 138

Query: 389 EFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
            FTF  ++ +   +  + +   +H  V   G   N+ V  AL+  YAK  +I  + ++F 
Sbjct: 139 NFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQIDVSRRVFD 198

Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
            M  R++I+WN +++G+ LN    + ++   E+    +RP+  T    +  C  +     
Sbjct: 199 CMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDV 258

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G  +H + LK  +I+  SL +A+IT+YA   DL  S  VF++   KD +S+N++ISAY Q
Sbjct: 259 GDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQ 318

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           H   KEA   F+ M  V  ++P+  T  +VL +CS    ++ G  +   M+   G     
Sbjct: 319 HHIWKEAFEIFRLMHCVA-VRPNLVTVVSVLPSCSDFFGINHGESVH-GMIIKLGLAEHV 376

Query: 626 DHLSCMLDLLGRAGYLD 642
              S ++ +  + G LD
Sbjct: 377 SVASALVSMYSKLGKLD 393


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 171/512 (33%), Positives = 269/512 (52%), Gaps = 40/512 (7%)

Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAM 315
           +N M  G A       AL  +  M+   L P+  +F  ++ +C   +    G Q+H   +
Sbjct: 33  WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92

Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR--------------------------- 348
           K G++    V+ + I+MY+  G++++A  +F R                           
Sbjct: 93  KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152

Query: 349 ----LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
               +  KD+VSWN MIS Y +    + A+  Y +M    ++PDE T  +++   A SG 
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212

Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
           IE+   +H+++  +G  +NI++ N LI  Y+K   ++ A  +F  ++ +++I+WNTLI G
Sbjct: 213 IELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGG 272

Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK--NNLI 519
                   + L  F E+L S   P++ T+   L +CA + ++  G+ IH Y+ K    + 
Sbjct: 273 HTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVT 332

Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
           +  SL  ++I +YAKCGD++ + +VF+ M+ +   SWNA+I  +A HG+   A   F  M
Sbjct: 333 NASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKM 392

Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
           +  G I PD  TF  +LSACSH+G++D G  IF SM  DY   P  +H  CM+DLLG  G
Sbjct: 393 RKNG-IDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG 451

Query: 640 YLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSN 699
              EA+ +I +  ++     W +L  AC  H N+ LG   A  L++ E + P  YVLLSN
Sbjct: 452 LFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSN 511

Query: 700 IYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           IYA AG W++ A IR LL   G+ K PGCS I
Sbjct: 512 IYATAGRWDQVAKIRTLLNDKGIKKAPGCSSI 543



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 257/528 (48%), Gaps = 47/528 (8%)

Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
           + YA  +F+ + + +L ++N M  G   N      + L+  M  L +  ++YSF  +L  
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 199 C--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE-------- 248
           C     L+E G+Q+H  V K G+   + V  +LI+MY   G + DA KVF+         
Sbjct: 75  CAKSKALIE-GQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133

Query: 249 ---------AKGY------------VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
                    ++GY            V D +S+N M+ G       +EAL  ++DM+  ++
Sbjct: 134 YTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNV 193

Query: 288 RPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
           +P E T V+V+SAC       +G Q+H+     GF +   + N  I +YS CG+++ AC 
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACG 253

Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGF 401
           +F  L +KD++SWNT+I  +   NL + A+L + EM   G  P++ T  S+L   A  G 
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313

Query: 402 IEMVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLI 459
           I++   IH ++   + G+     +  +LI  YAK   I+ A Q+F +M  R++ +WN +I
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMI 373

Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
            GF ++G        FS++  + + PD+ T    LS+C+    L  G+ I   + ++  I
Sbjct: 374 FGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKI 433

Query: 520 S-KMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
           + K+     MI L   CG   +    +  M +E D + W +L+ A   H   +   S   
Sbjct: 434 TPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGES--- 490

Query: 578 AMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSMVNDYGFIPA 624
             Q++ +I+P+      +LS   + AG  D   +I  +++ND G   A
Sbjct: 491 YAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKI-RTLLNDKGIKKA 537



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 197/375 (52%), Gaps = 11/375 (2%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL L+V +  S  L P+ YS    L +CA  +    G Q+H + L+ G     +V  +++
Sbjct: 49  ALKLYVCM-ISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLI 107

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
           S+Y     L    +VF    +  V S+T  ++     G+++ A ++FD++  +D+  +NA
Sbjct: 108 SMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNA 167

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG 218
           MI+G  E       + L+++M K +V+ D  +  +V+S C  +G +E GRQLHS +   G
Sbjct: 168 MISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG 227

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALI 277
           F   + +VN LI +Y  CG V  AC +F+  AK    D IS+N ++ G   +   +EAL+
Sbjct: 228 FGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKK---DVISWNTLIGGHTHMNLYKEALL 284

Query: 278 RFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK--SGFEAYTSVSNAAITM 332
            F++ML +   P+++T +SV+ AC       +G  +H    K   G    +S+  + I M
Sbjct: 285 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDM 344

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           Y+ CG I+ A  +F  +  + + SWN MI  +A      +A   + +M+  GI PD+ TF
Sbjct: 345 YAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 404

Query: 393 GSLLASSGFIEMVEM 407
             LL++     M+++
Sbjct: 405 VGLLSACSHSGMLDL 419



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 188/368 (51%), Gaps = 41/368 (11%)

Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS--- 398
           A  IF  +QE +++ WNTM   +A  +   +A+  Y+ M S+G+ P+ ++F  LL S   
Sbjct: 18  AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77

Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR------- 450
               IE  + IH  V   G   ++ V+ +LIS YA+N R++ A+++F   S R       
Sbjct: 78  SKALIEG-QQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTA 136

Query: 451 ------------------------NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPD 486
                                   ++++WN +I+G++      + L+ + +++ + ++PD
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPD 196

Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
           E T+   +S+CA+  S+  G+Q+H ++  +   S + + N +I LY+KCG+++ +  +F 
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256

Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
            + +KD ISWN LI  +      KEA+  F+ M   G   P+  T  +VL AC+H G +D
Sbjct: 257 GLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE-SPNDVTMLSVLPACAHLGAID 315

Query: 607 DGTRIFDSMVND--YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALF 664
            G R     +N    G   A   L+ ++D+  + G ++ A++V +S   ++ S +W A+ 
Sbjct: 316 IG-RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS-SWNAMI 373

Query: 665 SACAAHGN 672
              A HG 
Sbjct: 374 FGFAMHGK 381


>gi|296085462|emb|CBI29194.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 206/688 (29%), Positives = 339/688 (49%), Gaps = 78/688 (11%)

Query: 54  KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH--VANTILSLYKNARDLVSV 111
           + D  SL+  ++A A L   +FG  +H + ++ G K   H    N+++SLY   RD+ + 
Sbjct: 212 QADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAA 271

Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
           + +F E++  D+ SW                               NAM+ G   N    
Sbjct: 272 EILFKEMKYKDIVSW-------------------------------NAMLDGLALNQRIW 300

Query: 172 IGIGLFREMHKLD-VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNAL 229
               L  EM  L  V+ D+ +   ++ +C +  LL  GR +H L  +       SV N+L
Sbjct: 301 EAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSL 360

Query: 230 ITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRP 289
           I MY  C +V  A                +N         G   EA   FR +L +  + 
Sbjct: 361 IDMYSKCKDVKRA---------------EHN---------GHSREAQHLFRQLLQSYSQC 396

Query: 290 SELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
           S  T ++++ +C      + G  +H   +K GF       N+ + MY +CG +  AC  F
Sbjct: 397 SLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDL-VAC--F 453

Query: 347 ARLQE----KDIVSWNTMISTYAQRNLGRSAILAY-LEMQSVGIRPDEFTFGSLLASSGF 401
           + LQ      DIV WNT+++   Q      A+ A+ L  Q   +  D     +++++ G 
Sbjct: 454 SLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGN 513

Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
           +E++     +H       + ++I+V NALI+ Y +   I+ A  IF     RN+ +WN +
Sbjct: 514 LELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCM 573

Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
           I+ F  N    + L+ F  +   E  P+E T+   LS+C ++  LRHGKQIHG+V+++ L
Sbjct: 574 ISAFSQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRL 630

Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
                +  A+  +Y+ CG LD + ++F    E+   +WN++ISA+  H  G +A+  F  
Sbjct: 631 QGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHE 690

Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
           M++ G  +P ++TF ++LSACSH+GLV++G   + +M+  +      +H  CM+D+LGRA
Sbjct: 691 MRECG-TRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRA 749

Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
           G L EA   I     Q     W AL SAC+ HG+L++GR +A LL E E +    Y+ LS
Sbjct: 750 GRLGEAYEFIRQMPTQPEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLS 809

Query: 699 NIYAAAGLWEEAANIRELLKRTGVIKQP 726
           N+Y AAG W++A  +R +++  G +K+P
Sbjct: 810 NMYVAAGRWKDAVELRRIIQDKG-LKKP 836



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 169/646 (26%), Positives = 297/646 (45%), Gaps = 76/646 (11%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           A++LFV++     +  D  +L   ++A +++ N   G  LH  + + GL +   + N ++
Sbjct: 98  AVNLFVEL-MGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALI 156

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            +Y    +L S                    S C           VF  M  RD+  +N+
Sbjct: 157 DMYAKCGELSS--------------------SEC-----------VFGGMEYRDIISWNS 185

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSG 218
           M+ GC  N Y    +  F++M     + DN S    +S     G L FG+ +H    K G
Sbjct: 186 MMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLG 245

Query: 219 FSCLV--SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEAL 276
           +  +   S  N+LI++Y  C ++  A  +F+E K    D +S+N M+DGLA   R+ EA 
Sbjct: 246 YKDISHNSFENSLISLYSQCRDIQAAEILFKEMK--YKDIVSWNAMLDGLALNQRIWEAF 303

Query: 277 IRFRDM-LVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITM 332
               +M L+  ++P  +T V ++  C   +  R G  VH   ++       SV+N+ I M
Sbjct: 304 DLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDM 363

Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
           YS C  +  A       + + +  +  ++ +Y+Q +L  S +LA L        P     
Sbjct: 364 YSKCKDVKRAEHNGHSREAQHL--FRQLLQSYSQCSL--STLLAIL--------PS---- 407

Query: 393 GSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRN 451
                SS F++  E IH +    G   N    N+L+  Y     +   + +   +S   +
Sbjct: 408 ---CDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAAD 464

Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL----SSCARISSLRHGK 507
           I+ WNT++ G   NG   + L+ F+  LM +  PD    SVAL    S+C  +  L  G 
Sbjct: 465 IVCWNTVMAGCTQNGHFWEALKAFN--LMRQ-DPDVCHDSVALFNVISACGNLELLFAGG 521

Query: 508 QIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHG 567
            +HG  LK  + S + + NA+IT+Y +CG+++ +  +F     ++  SWN +ISA++Q+ 
Sbjct: 522 SLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNK 581

Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDH 627
           +G+ A+  F  ++     +P++ T   +LSAC+  G++  G +I   ++     +     
Sbjct: 582 DGRRALELFCHIE----FEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSR--LQGNSF 635

Query: 628 LSCML-DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
           +S  L D+    G LD A ++  S   ++ +  W ++ SA   H N
Sbjct: 636 VSAALEDMYSNCGRLDTAFQIFQSSPERSVAA-WNSMISAFGFHSN 680



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 220/478 (46%), Gaps = 58/478 (12%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
           +GH ++A HLF Q+  S+  +  + +L   L +C +     FG  +H + L+ G    P 
Sbjct: 376 NGHSREAQHLFRQLLQSYS-QCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPL 434

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQN----PDVYSWTTFLSACTKMGHVDYACEVFDKM 149
             N+++ +Y N  DLV+    FS +Q      D+  W T ++ CT+ GH   A + F+ M
Sbjct: 435 AVNSLMLMYINCGDLVA---CFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLM 491

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
             R  P                            DV  D+ +  +V+S C +  LL  G 
Sbjct: 492 --RQDP----------------------------DVCHDSVALFNVISACGNLELLFAGG 521

Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGL 266
            LH L  K+     + V NALITMY  CG + +A  +F    G+ C+    S+N M+   
Sbjct: 522 SLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF----GFSCNRNLCSWNCMISAF 577

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
           +       AL  F  +      P+E+T V ++SAC      R G Q+H   ++S  +  +
Sbjct: 578 SQNKDGRRALELFCHI---EFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNS 634

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            VS A   MYS+CG++D A  IF    E+ + +WN+MIS +   + G  AI  + EM+  
Sbjct: 635 FVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMREC 694

Query: 384 GIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
           G RP + TF SLL++   SG + E +      + +  +  + +    ++    +  R+ +
Sbjct: 695 GTRPTKSTFISLLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGE 754

Query: 440 AYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
           AY+    M  +     W  L++    +G    G +  +ELL  EL P+     ++LS+
Sbjct: 755 AYEFIRQMPTQPEPGVWGALLSACSYHGDLKMG-REVAELLF-ELEPENVGYYISLSN 810



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 158/629 (25%), Positives = 263/629 (41%), Gaps = 66/629 (10%)

Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
           T+ L+A ++      +  +FD++  RD+ ++NAMIT   EN    + + LF E+    V 
Sbjct: 52  TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 111

Query: 187 RDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
            D+ +   V+S     G L  GR LH +  K+G      + NALI MY  CG +  +  V
Sbjct: 112 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 171

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
           F   +    D IS+N MM G A     +++L  F+ M  +S +   ++    +SA     
Sbjct: 172 FGGMEYR--DIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG 229

Query: 304 -PRVGYQVHAQAMKSGFE--AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
               G  +H   +K G++  ++ S  N+ I++YS C  I  A ++F  ++ KDIVSWN M
Sbjct: 230 ELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAM 289

Query: 361 ISTYAQRNLGRSAILAYLEMQSVG-IRPDEFT---FGSLLASSGFIEMVEMIHAFVFING 416
           +   A       A     EMQ +G ++PD  T      L A    +     +H       
Sbjct: 290 LDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRRE 349

Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
           +  +  V+N+LI  Y+K + +K+A                        NG   +    F 
Sbjct: 350 MGLDFSVTNSLIDMYSKCKDVKRAEH----------------------NGHSREAQHLFR 387

Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
           +LL S  +    TL   L SC     L+ G+ IH + LK    +     N+++ +Y  CG
Sbjct: 388 QLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCG 447

Query: 537 DL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
           DL  C   +  +    D + WN +++   Q+G   EA+  F  M+    +  D      V
Sbjct: 448 DLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNV 507

Query: 596 LSACSH-----AG----------LVDDGTRIFDSMVNDYGFIPAEDH------------- 627
           +SAC +     AG          L++   R+ ++++  YG     ++             
Sbjct: 508 ISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNL 567

Query: 628 --LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG-LLL 684
              +CM+    +      A  +      +        + SAC   G LR G+ I G ++ 
Sbjct: 568 CSWNCMISAFSQNKDGRRALELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIR 627

Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANI 713
            R Q    V   L ++Y+  G  + A  I
Sbjct: 628 SRLQGNSFVSAALEDMYSNCGRLDTAFQI 656



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 5/306 (1%)

Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
           H  A K G  A+   S + +T YS       +  +F  +  +D++ WN MI+   +    
Sbjct: 36  HCLAFKMGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCF 95

Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
             A+  ++E+   G+  D  T   ++++S   G +    ++H   F  G++++  + NAL
Sbjct: 96  GVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNAL 155

Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
           I  YAK   +  +  +F  M  R+II+WN+++ G   N +P + L +F ++  S  + D 
Sbjct: 156 IDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADN 215

Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNL--ISKMSLGNAMITLYAKCGDLDCSLRVF 545
            +L+ A+S+ A +  L  G+ IHG+ +K     IS  S  N++I+LY++C D+  +  +F
Sbjct: 216 VSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILF 275

Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
             M  KD +SWNA++   A +    EA      MQ +G ++PD  T   ++  C+   L+
Sbjct: 276 KEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLL 335

Query: 606 DDGTRI 611
            +G  +
Sbjct: 336 REGRAV 341



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 37/278 (13%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +A  +++GH+ +AL  F  +     +  D  +L   ++AC NL     G  LH  AL
Sbjct: 469 NTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLAL 528

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           +  +++   V N ++++Y    ++ + + +F                         ++C 
Sbjct: 529 KTLMESDIRVQNALITMYGRCGEIENARIIFG------------------------FSC- 563

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
                 +R+L  +N MI+  ++N      + LF     ++   +  +   +LS C   G+
Sbjct: 564 ------NRNLCSWNCMISAFSQNKDGRRALELFCH---IEFEPNEITIVGILSACTQLGV 614

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
           L  G+Q+H  V +S       V  AL  MY NCG +  A ++F+ +        ++N M+
Sbjct: 615 LRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSV--AAWNSMI 672

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
                     +A+  F +M     RP++ TF+S++SAC
Sbjct: 673 SAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSAC 710


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 282/554 (50%), Gaps = 15/554 (2%)

Query: 188 DNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           D+ +F      C AGL     GR +H     +GF     V NALI+MY +CG+V  A  V
Sbjct: 107 DHLTFPFAAKAC-AGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F   +      +S+N ++ G    G  E AL  F +M    +     T VSV+ AC   +
Sbjct: 166 FGAMRNRTV--VSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAK 223

Query: 306 ---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
               G  VH      G   Y +V NA I MY  C  +++A  +F   + +KD+VSW  MI
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283

Query: 362 STYAQRNLGRSAILAYLEMQSVGIR-PDEFTFGSLLASSGFI---EMVEMIHAFVFINGI 417
             Y   +    AI    +M   G   P+  T   LL++   +   +  +  HA     G+
Sbjct: 284 GAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGL 343

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            ++I V  ALI AYA+  ++K         S R   TWN  ++G+ ++G   + ++ F  
Sbjct: 344 KSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKR 402

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           ++   +RPD  T++  L + A  + L+ GK IH ++L    +    +   +I +Y+K GD
Sbjct: 403 MIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGD 462

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           LD +  +F  + EKD ++W  +I+ Y+ HG  + A+  +  M + G  KP+  T   +L 
Sbjct: 463 LDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGG-KPNTVTIATLLY 521

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSHAG++D+G ++F  M N +G +P  +H SC++D+LGRAG ++EA R+I     +  +
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPST 581

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W AL  AC  H N+  G + A  L + + +    YVLL NIYAAA  W +  ++R ++
Sbjct: 582 SVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMM 641

Query: 718 KRTGVIKQPGCSWI 731
              G++K+PG S +
Sbjct: 642 VERGLLKEPGSSLV 655



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 233/517 (45%), Gaps = 55/517 (10%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           ACA LR    G  +H  AL AG     +V N ++S+Y +  D+ + + VF  ++N  V S
Sbjct: 117 ACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVS 176

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W   ++ C K G+ + A EVF +M                    + +GI           
Sbjct: 177 WNAVIAGCVKNGYAERALEVFGEM------------------AADGVGI----------- 207

Query: 186 RRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             D  +  SVL  C  A  L  GR +H LV   G    V+V NALI MY  C ++ DA +
Sbjct: 208 --DRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARR 265

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLC 303
           VF+  K +  D +S+  M+       R  EA+     ML++ +  P+ +T V ++SAC  
Sbjct: 266 VFDHCK-HDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACAS 324

Query: 304 PRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
              G      HA  ++ G ++  +V  A I  Y+ CGK+    +   R   +   +WN  
Sbjct: 325 MPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAA 383

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           +S Y      + AI  +  M +  +RPD  T  S+L   A S  ++  + IH F+   G 
Sbjct: 384 LSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGF 443

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + + +++  LI  Y+K   +  A+ +F  +  ++++ W T+I G+ ++G     +  +  
Sbjct: 444 LRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDR 503

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHG-------KQIHGYVLKNNLISKMSLGNAMIT 530
           ++ S  +P+  T++  L +C+    +  G       + +HG +      S       ++ 
Sbjct: 504 MVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS------CLVD 557

Query: 531 LYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
           +  + G ++ + R+  +M  E  T  W AL+ A   H
Sbjct: 558 MLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 240/515 (46%), Gaps = 32/515 (6%)

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
             SG       ++ L  +Y  CG    A  +  +         S N ++     +G   E
Sbjct: 37  LTSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFS-NSLLRSYTGLGCHRE 95

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAIT 331
           AL  +  M         LTF     AC   R+G     VH +A+ +GF   T V NA I+
Sbjct: 96  ALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALIS 151

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY SCG +  A  +F  ++ + +VSWN +I+   +      A+  + EM + G+  D  T
Sbjct: 152 MYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRAT 211

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF-HNM 447
             S+L   A +  +     +H  V   G+   + V NALI  Y K   ++ A ++F H  
Sbjct: 212 VVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCK 271

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHG 506
             +++++W  +I  ++LN    + +    ++LMS    P+  T+   LS+CA + S +H 
Sbjct: 272 HDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHA 331

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI---SWNALISAY 563
           K  H   ++  L S +++  A+I  YA+CG     +++  + +E+ +    +WNA +S Y
Sbjct: 332 KCTHALCIRLGLKSDIAVETALIDAYARCG----KMKLMRLTLERGSWRAETWNAALSGY 387

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
              G  K+A+  FK M     ++PD AT  ++L A + +  + +G  I   ++   GF+ 
Sbjct: 388 TVSGREKKAIELFKRMI-AESVRPDSATMASILPAYAESADLKEGKNIHCFLLT-LGFLR 445

Query: 624 AEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           + +  + ++D+  +AG LD A  +   +  + + A    W  + +  + HG+ R   ++ 
Sbjct: 446 STEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA----WTTIIAGYSIHGHARTAILLY 501

Query: 681 GLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANI 713
             ++E    KP+   + + +YA   AG+ +E   +
Sbjct: 502 DRMVE-SGGKPNTVTIATLLYACSHAGMIDEGIKV 535



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 12/213 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +L+  + SG  + A+ LF ++  +  ++PD  ++++ L A A   +   G  +H + L
Sbjct: 381 NAALSGYTVSGREKKAIELFKRM-IAESVRPDSATMASILPAYAESADLKEGKNIHCFLL 439

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G      +A  ++ +Y  A DL +   +F  +   DV +WTT ++  +  GH   A  
Sbjct: 440 TLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAIL 499

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLS 197
           ++D+M +     +      ++  C+  G  D GI +F++M   H L    ++YS   V  
Sbjct: 500 LYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS-CLVDM 558

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
           +  AG +E   + H L+    F    SV  AL+
Sbjct: 559 LGRAGRIE---EAHRLIQDMPFEPSTSVWGALL 588


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 281/554 (50%), Gaps = 15/554 (2%)

Query: 188 DNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
           D+ +F      C AGL     GR +H     +GF     V NALI+MY +CG+V  A  V
Sbjct: 107 DHLTFPFAAKAC-AGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAV 165

Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR 305
           F   +      +S+N ++ G    G  E AL  F +M    +     T VSV+ AC   +
Sbjct: 166 FGAMRNRTV--VSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAK 223

Query: 306 ---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI 361
               G  VH      G   Y +V NA I MY  C  +++A  +F   + +KD+VSW  MI
Sbjct: 224 DLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMI 283

Query: 362 STYAQRNLGRSAILAYLEMQSVGIR-PDEFTFGSLLASSGFI---EMVEMIHAFVFINGI 417
             Y   +    AI    +M   G   P+  T   LL++   +   +  +  HA     G+
Sbjct: 284 GAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGL 343

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
            ++I V  ALI AYA+  ++K         S R   TWN  ++G+ ++G   + ++ F  
Sbjct: 344 KSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELFKR 402

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
           ++   +RPD  T++  L + A  + L+ GK IH ++L    +    +   +I +Y+K GD
Sbjct: 403 MIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGD 462

Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
           LD +  +F  + EKD ++W  +I+ Y  HG  + A+  +  M + G  KP+  T   +L 
Sbjct: 463 LDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGG-KPNTVTIATLLY 521

Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARS 657
           ACSHAG++D+G ++F  M N +G +P  +H SC++D+LGRAG ++EA R+I     +  +
Sbjct: 522 ACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPST 581

Query: 658 DNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
             W AL  AC  H N+  G + A  L + + +    YVLL NIYAAA  W +  ++R ++
Sbjct: 582 SVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMM 641

Query: 718 KRTGVIKQPGCSWI 731
              G++K+PG S +
Sbjct: 642 VERGLLKEPGSSLV 655



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 233/517 (45%), Gaps = 55/517 (10%)

Query: 66  ACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYS 125
           ACA LR    G  +H  AL AG     +V N ++S+Y +  D+ + + VF  ++N  V S
Sbjct: 117 ACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVS 176

Query: 126 WTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDV 185
           W   ++ C K G+ + A EVF +M                    + +GI           
Sbjct: 177 WNAVIAGCVKNGYAERALEVFGEM------------------AADGVGI----------- 207

Query: 186 RRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
             D  +  SVL  C  A  L  GR +H LV   G    V+V NALI MY  C ++ DA +
Sbjct: 208 --DRATVVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARR 265

Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLC 303
           VF+  K +  D +S+  M+       R  EA+     ML++ +  P+ +T V ++SAC  
Sbjct: 266 VFDHCK-HDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACAS 324

Query: 304 PRVGYQ---VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
              G      HA  ++ G ++  +V  A I  Y+ CGK+    +   R   +   +WN  
Sbjct: 325 MPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAA 383

Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
           +S Y      + AI  +  M +  +RPD  T  S+L   A S  ++  + IH F+   G 
Sbjct: 384 LSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGF 443

Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
           + + +++  LI  Y+K   +  A+ +F  +  ++++ W T+I G+ ++G     +  +  
Sbjct: 444 LRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDR 503

Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHG-------KQIHGYVLKNNLISKMSLGNAMIT 530
           ++ S  +P+  T++  L +C+    +  G       + +HG +      S       ++ 
Sbjct: 504 MVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS------CLVD 557

Query: 531 LYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQH 566
           +  + G ++ + R+  +M  E  T  W AL+ A   H
Sbjct: 558 MLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLH 594



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 131/515 (25%), Positives = 239/515 (46%), Gaps = 32/515 (6%)

Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEE 274
             SG       ++ L  +Y  CG    A  +  +         S N ++     +G   E
Sbjct: 37  LTSGHLLRYHGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFS-NSLLRSYTGLGCHRE 95

Query: 275 ALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMKSGFEAYTSVSNAAIT 331
           AL  +  M         LTF     AC   R+G     VH +A+ +GF   T V NA I+
Sbjct: 96  ALAVYSAMRAF----DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALIS 151

Query: 332 MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFT 391
           MY SCG +  A  +F  ++ + +VSWN +I+   +      A+  + EM + G+  D  T
Sbjct: 152 MYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRAT 211

Query: 392 FGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF-HNM 447
             S+L   A +  +     +H  V   G+   + V NALI  Y K   ++ A ++F H  
Sbjct: 212 VVSVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCK 271

Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRPDEYTLSVALSSCARISSLRHG 506
             +++++W  +I  ++LN    + +    ++LMS    P+  T+   LS+CA + S +H 
Sbjct: 272 HDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKHA 331

Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI---SWNALISAY 563
           K  H   ++  L S +++  A+I  YA+CG     +++  + +E+ +    +WNA +S Y
Sbjct: 332 KCTHALCIRLGLKSDIAVETALIDAYARCG----KMKLMRLTLERGSWRAETWNAALSGY 387

Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
              G  K+A+  FK M     ++PD AT  ++L A + +  + +G  I   ++   GF+ 
Sbjct: 388 TVSGREKKAIELFKRMI-AESVRPDSATMASILPAYAESADLKEGKNIHCFLLT-LGFLR 445

Query: 624 AEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
           + +  + ++D+  +AG LD A  +   +  + + A    W  + +    HG+ R   ++ 
Sbjct: 446 STEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVA----WTTIIAGYGIHGHARTAILLY 501

Query: 681 GLLLEREQDKPSVYVLLSNIYAA--AGLWEEAANI 713
             ++E    KP+   + + +YA   AG+ +E   +
Sbjct: 502 DRMVE-SGGKPNTVTIATLLYACSHAGMIDEGIKV 535



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 12/213 (5%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N +L+  + SG  + A+ LF ++  +  ++PD  ++++ L A A   +   G  +H + L
Sbjct: 381 NAALSGYTVSGREKKAIELFKRM-IAESVRPDSATMASILPAYAESADLKEGKNIHCFLL 439

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
             G      +A  ++ +Y  A DL +   +F  +   DV +WTT ++     GH   A  
Sbjct: 440 TLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAIL 499

Query: 145 VFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREM---HKLDVRRDNYSFASVLS 197
           ++D+M +     +      ++  C+  G  D GI +F++M   H L    ++YS   V  
Sbjct: 500 LYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYS-CLVDM 558

Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALI 230
           +  AG +E   + H L+    F    SV  AL+
Sbjct: 559 LGRAGRIE---EAHRLIQDMPFEPSTSVWGALL 588


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/534 (33%), Positives = 280/534 (52%), Gaps = 17/534 (3%)

Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
            R LH L   +G++    V +AL  +YF      DA KVF+       D I +N ++ GL
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPS--PDTILWNTLLAGL 190

Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT 323
                  EA +R  D     +RP   T  S + A        +G  VH   +K G   + 
Sbjct: 191 PG-SEALEAFVRMVD--AGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHE 247

Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
            V    +++YS CG +D A  +F R+   D+V++N +IS Y+   +  S++  + E+ + 
Sbjct: 248 HVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTAS 307

Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
           G RP+  T  +++   +  G   +   +HAFV    +  +  VS AL + Y +   ++ A
Sbjct: 308 GWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESA 367

Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL--RPDEYTLSVALSSCA 498
             IF  M  + + +WN +I+G+  NG     +  F   LM EL  +P+  T+S  LS+CA
Sbjct: 368 RSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQ--LMQELNVQPNPITISSTLSACA 425

Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
            + +L  GK +H  + K  L   + +  A+I +YAKCG +  +  +F+ M  K+ +SWNA
Sbjct: 426 HLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNA 485

Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
           +IS Y  HG+G EA+  +K M D  RI P  +TF +V+ ACSH GLVD+G ++F  M N+
Sbjct: 486 MISGYGLHGQGAEALKLYKDMLD-ARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNE 544

Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN-WWALFSACAAHGNLRLGR 677
           Y   P  +H +CM+DLLGRAG L+EA  +I+     A     W AL  AC  H N  L +
Sbjct: 545 YRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAK 604

Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
           + +  L E + +    YVLLSN+Y +   + EAA +R+  K   ++K PGC+ I
Sbjct: 605 LASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLI 658



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 175/376 (46%), Gaps = 41/376 (10%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  LA L  S    +AL  FV++  + +++PD  +L+++L A A   + A G  +H Y +
Sbjct: 184 NTLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGV 239

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           + GL  + HV   ++SLY                               +K G +D A  
Sbjct: 240 KCGLAEHEHVVTGLMSLY-------------------------------SKCGDMDSAQF 268

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
           +FD+M + DL  YNA+I+G + NG  +  + LF+E+     R ++ +  +V+ V    G 
Sbjct: 269 LFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGH 328

Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
               R LH+ V K+       V  AL T+Y    ++  A  +F+       +  S+N M+
Sbjct: 329 ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTME--SWNAMI 386

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
            G A  G  E A+  F+ M   +++P+ +T  S +SAC       +G  VH    K   E
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
               V  A I MY+ CG I EA  IF R+  K++VSWN MIS Y     G  A+  Y +M
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM 506

Query: 381 QSVGIRPDEFTFGSLL 396
               I P   TF S++
Sbjct: 507 LDARILPTSSTFLSVI 522



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 35/282 (12%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++  S +G  + ++ LF ++ +S   +P+  +L   +   +   +      LH
Sbjct: 278 LVAYNALISGYSVNGMVESSVELFKELTAS-GWRPNSSTLVAVIPVYSPFGHELLARCLH 336

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
           A+ ++A L A   V+  + +LY    D+ S + +F                         
Sbjct: 337 AFVVKARLDADALVSTALTTLYCRLNDMESARSIF------------------------- 371

Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
                 D M ++ +  +NAMI+G  +NG  ++ + LF+ M +L+V+ +  + +S LS C 
Sbjct: 372 ------DAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACA 425

Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
             G L  G+ +H +++K      V V+ ALI MY  CG++ +A  +F+       + +S+
Sbjct: 426 HLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNK--NVVSW 483

Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
           N M+ G    G+  EAL  ++DML A + P+  TF+SV+ AC
Sbjct: 484 NAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYAC 525



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 90/193 (46%), Gaps = 35/193 (18%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  ++  +++G  + A+ LF Q+     ++P+  ++S+TL+ACA+L   + G  +H    
Sbjct: 383 NAMISGYAQNGLTEMAVALF-QLMQELNVQPNPITISSTLSACAHLGALSLGKWVH---- 437

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFS-EIQNPDVYSWTTFLSACTKMGHVDYAC 143
                                       R+ S E    +VY  T  +    K G +  A 
Sbjct: 438 ----------------------------RIISKEKLELNVYVMTALIDMYAKCGSIAEAR 469

Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AG 202
            +FD+M ++++  +NAMI+G   +G     + L+++M    +   + +F SV+  C   G
Sbjct: 470 SIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGG 529

Query: 203 LLEFGRQLHSLVT 215
           L++ G+++  ++T
Sbjct: 530 LVDEGQKVFRVMT 542


>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
          Length = 583

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/590 (30%), Positives = 309/590 (52%), Gaps = 13/590 (2%)

Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFG 207
           MP+RD  V+NA+I G + NGYE     LF  M +        +  ++L  C   G +  G
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
           R +H +  KSG      V NALI+ Y  C  +  A  +F E K      +S+N M+   +
Sbjct: 61  RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK--STVSWNTMIGAYS 118

Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ-VHAQAMKSGFEAYTSVS 326
             G  EEA+  F++M   ++  S +T ++++SA     V ++ +H   +K G     SV 
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSA----HVSHEPLHCLVVKCGMVNDISVV 174

Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
            + +  YS CG +  A  ++A  ++  IV   +++S YA++     A++ + + + + ++
Sbjct: 175 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 234

Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
            D      +L     S  I++   +H +   +G+ T   V N LI+ Y+K + ++    +
Sbjct: 235 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 294

Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISS 502
           F  +    +I+WN++I+G + +G      + F +++++  L PD  T++  L+ C+++  
Sbjct: 295 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 354

Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
           L  GK++HGY L+NN  ++  +  A+I +YAKCG+   +  VF  +    T +WN++IS 
Sbjct: 355 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 414

Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
           Y+  G    A+SC+  M++ G +KPD+ TF  VLSAC+H G VD+G   F +M+ ++G  
Sbjct: 415 YSLSGLQHRALSCYLEMREKG-LKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGIS 473

Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
           P   H + M+ LLGRA    EA  +I    I+  S  W AL SAC  H  L +G  +A  
Sbjct: 474 PTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARK 533

Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
           +   +     +YVL+SN+YA   +W++   +R ++K  G     G S IG
Sbjct: 534 MFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQIG 583



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 239/554 (43%), Gaps = 50/554 (9%)

Query: 25  NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
           N  +   SR+G+  DA  LF+ +       P   +L   L  C      + G  +H  A 
Sbjct: 10  NALICGYSRNGYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68

Query: 85  RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
           ++GL+    V N ++S Y    +L S + +F E+++    SW T + A ++ G  + A  
Sbjct: 69  KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128

Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
           VF  M ++++ +                                  S  +++++  A + 
Sbjct: 129 VFKNMFEKNVEI----------------------------------SPVTIINLLSAHVS 154

Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMM 263
                LH LV K G    +SVV +L+  Y  CG +V A +++  AK    D I     ++
Sbjct: 155 H--EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ---DSIVGLTSIV 209

Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
              A  G ++ A++ F       ++   +  V ++  C       +G  +H  A+KSG  
Sbjct: 210 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 269

Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
             T V N  ITMYS    ++    +F +LQE  ++SWN++IS   Q     +A   + +M
Sbjct: 270 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 329

Query: 381 Q-SVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
             + G+ PD  T  SLLA       + + + +H +   N       V  ALI  YAK   
Sbjct: 330 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 389

Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
             QA  +F ++      TWN++I+G+ L+G   + L  + E+    L+PDE T    LS+
Sbjct: 390 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 449

Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT--LYAKCGDLDCSLRVFNMMIEKDTI 554
           C     +  GK     ++K   IS      A++   L   C   +    ++ M I+ D+ 
Sbjct: 450 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 509

Query: 555 SWNALISAYAQHGE 568
            W AL+SA   H E
Sbjct: 510 VWGALLSACIIHRE 523



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)

Query: 21  LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
           L+  N  ++   +SG    A  +F Q+  +  L PD  ++++ LA C+ L     G +LH
Sbjct: 303 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 362

Query: 81  AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG--H 138
            Y LR   +    V   ++ +Y    + V  + VF  I+ P   +W + +S  +  G  H
Sbjct: 363 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQH 422

Query: 139 VDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
              +C  E+ +K    D   +  +++ C   G+ D G   FR M K
Sbjct: 423 RALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 468


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 295/586 (50%), Gaps = 85/586 (14%)

Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
           LI  Y   G++  + K+F +    + D + YN M+   +       A+  F DM   + R
Sbjct: 85  LIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFR 144

Query: 289 PSELTFVSVMSACLC----PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGK------ 338
           P   TF SV+ A        +   Q+H   +KSG    TSV NA I+ Y  C        
Sbjct: 145 PDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQS 204

Query: 339 ---IDEACMIFARLQEKDI-------------------------------VSWNTMISTY 364
              + EA  +F  +  +D                                V+WN MIS Y
Sbjct: 205 SSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGY 264

Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITN- 420
           A R L   A   + +M    I+ DEFTF S++   A++G   + + +HA+ F+  +    
Sbjct: 265 AHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAY-FLKTVANPA 323

Query: 421 ----IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL-----------LN 465
               + V+NALI+ Y K  ++  A +IF+ M  R++++WN +++G++            N
Sbjct: 324 PDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFN 383

Query: 466 --------------------GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
                               GF  + L+ F+ + +    P +Y  + A+ SC+ + SL+H
Sbjct: 384 EMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKH 443

Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
           G+Q+H  V++    S +S GNA+IT+YA+CG +D +  +F  M   D ISWNA+I+A  Q
Sbjct: 444 GRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQ 503

Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
           HG+G +A+  F+ M   G I PD+ +F  V+SACSHAGLV +G + FDSM N YG  P E
Sbjct: 504 HGQGTQAIELFEEMLKEG-ILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDE 562

Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
           +H + ++DLL RAG   EA+ V+ S   +  +  W AL + C  HGN+ LG   A  L E
Sbjct: 563 EHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFE 622

Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
            +      YVLLSN+YA AG W + A +R+L++  GV K+PGCSWI
Sbjct: 623 LKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 165/630 (26%), Positives = 282/630 (44%), Gaps = 101/630 (16%)

Query: 74  AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
           +    +HA+ + +G +   H+ N ++ +Y  +  L   + +F EI  PD+ + TT ++A 
Sbjct: 30  SLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAY 89

Query: 134 TKMGHVDYACEVFDKMP--DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
           +  G +  + ++F   P   RD   YNAMIT  + N      I LF +M + + R DNY+
Sbjct: 90  SAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYT 149

Query: 192 FASVLSVCD--AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN---------VV 240
           F SVL      A   +  +QLH  V KSG   + SV+NALI+ Y  C           + 
Sbjct: 150 FTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMA 209

Query: 241 DACKVFEEAK------------GYVCDH-----------------ISYNVMMDGLASVGR 271
           +A K+F+E              GYV ++                 +++N M+ G A  G 
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGL 269

Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKS----GFEAYTS 324
             EA   FR M+++ ++  E TF SV+S C    C R+G ++HA  +K+      +    
Sbjct: 270 YLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMP 329

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY-------------------- 364
           V+NA IT Y  CGK+D A  IF ++ E+D+VSWN ++S Y                    
Sbjct: 330 VNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKN 389

Query: 365 -----------AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHA 410
                      AQ      A+  +  M+  G  P ++ F G++++ S  G ++    +HA
Sbjct: 390 ILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHA 449

Query: 411 FVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
            V   G  +++   NALI+ YA+   +  A+ +F NM   + I+WN +I     +G   Q
Sbjct: 450 QVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQ 509

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            ++ F E+L   + PD  +    +S+C+    ++ G++        + +  +   N    
Sbjct: 510 AIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYF------DSMHNVYGVNPDEE 563

Query: 531 LYAKCGDLDCSLRVF--------NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
            YA+  DL C    F        +M  E     W AL++    HG     +   +A + +
Sbjct: 564 HYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGI---EAAERL 620

Query: 583 GRIKPDQ-ATFTAVLSACSHAGLVDDGTRI 611
             +KP    T+  + +  + AG  +D  ++
Sbjct: 621 FELKPQHDGTYVLLSNMYAVAGQWNDMAKV 650



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 229/510 (44%), Gaps = 57/510 (11%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANL-RNAAFGNQLHAYALRAGLKAYPHVANTI 98
           A+ LF  +   +  +PD Y+ ++ L A A +        QLH   +++G      V N +
Sbjct: 131 AIELFCDMQRDN-FRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNAL 189

Query: 99  LSLYKNARD---------LVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
           +S Y              +   +++F E+ N D  SWTT ++   K   +D A E  +  
Sbjct: 190 ISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGT 249

Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
             +    +NAMI+G    G       +FR+M    ++ D ++F SV+SVC +AG    G+
Sbjct: 250 SKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGK 309

Query: 209 QLHSLVTKS----GFSCLVSVVNALITMYFNCGNVVDACKVF------------------ 246
           ++H+   K+         + V NALIT Y+ CG V  A ++F                  
Sbjct: 310 EMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGY 369

Query: 247 ------EEAKGYVCDH-----ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFV 295
                 +EAK +  +      +S+ +M+ GLA +G  EEAL  F  M +    P +  F 
Sbjct: 370 VNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFA 429

Query: 296 SVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEK 352
             + +C      + G Q+HAQ ++ G+E+  S  NA ITMY+ CG +D A  +F  +   
Sbjct: 430 GAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCV 489

Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFV 412
           D +SWN MI+   Q   G  AI  + EM   GI PD  +F +++++     +V+    + 
Sbjct: 490 DAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYF 549

Query: 413 ----FINGIITNIQVSNALISAYAKNERIKQAYQIFHNM--SPRNIITWNTLINGFLLNG 466
                + G+  + +    +I    +  +  +A ++  +M   P   I W  L+ G  ++G
Sbjct: 550 DSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPI-WEALLAGCRIHG 608

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSS 496
               G++    L   EL+P      V LS+
Sbjct: 609 NIDLGIEAAERLF--ELKPQHDGTYVLLSN 636


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/563 (30%), Positives = 295/563 (52%), Gaps = 30/563 (5%)

Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAK 250
           +  +L  C + G L   + LH  + K+G    + V  +L+ +Y  CGN  DA  +F+E  
Sbjct: 81  YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140

Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VG 307
               + +++  ++ G     +   AL  F +ML     PS+ T   ++SAC+      +G
Sbjct: 141 EK--NVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLG 198

Query: 308 YQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ- 366
            QVH   +K G  + TS+ N+   +Y+  G ++     F R+ +K++++W TMIS  A+ 
Sbjct: 199 KQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAED 258

Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQV 423
            N     +  +L+M    + P+EFT  S+++  G    + + + +  F F  G  TN+ V
Sbjct: 259 ENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPV 318

Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL-------------NGFPVQ 470
            N+ +  Y +    ++A ++F  M   ++ITWN +I+GF                GF  Q
Sbjct: 319 KNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGF--Q 376

Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
            L+ F +L+ S ++PD +T S  LS C+ + +L  G+QIH   +K   +S + + +A++ 
Sbjct: 377 ALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVN 436

Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
           +Y KCG ++ + + F  M  +  ++W ++IS Y+QHG   +A+  F+ M   G  KP++ 
Sbjct: 437 MYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG-AKPNEI 495

Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
           TF ++LSACS+AGLV++  R FD M N+Y   P  DH  CM+D+  R G LD+A   I  
Sbjct: 496 TFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKR 555

Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
           +  +     W +L + C +HGN+ L    A  LLE +      YVLL N+Y + G W + 
Sbjct: 556 KGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLLNMYISTGRWRDV 615

Query: 711 ANIRELLKRT--GVIKQPGCSWI 731
           A +R+L K    G+++    SWI
Sbjct: 616 ARVRKLSKHEDLGILRDR--SWI 636



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/487 (26%), Positives = 236/487 (48%), Gaps = 26/487 (5%)

Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
           D++  T+ ++   + G+   A  +FD+MP++++  + A+ITG T N    + + +F EM 
Sbjct: 112 DIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEML 171

Query: 182 KLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
           KL     +Y+   +LS C A   ++ G+Q+H    K G + + S+ N+L  +Y   GN+ 
Sbjct: 172 KLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLE 231

Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLAS-VGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
              + F+       + I++  M+   A      E  L  F DML   + P+E T  SVMS
Sbjct: 232 SGIRAFKRIPDK--NVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMS 289

Query: 300 AC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVS 356
            C   L   +G QV     K G      V N+ + +Y   G+ +EA  +F  +++  +++
Sbjct: 290 LCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVIT 349

Query: 357 WNTMISTYAQ-----------RNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
           WN MIS +AQ           R+ G  A+  + ++    ++PD FTF S+L   ++   +
Sbjct: 350 WNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMAL 409

Query: 403 EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
           E  E IHA     G ++++ V++AL++ Y K   I+ A + F  M  R ++TW ++I+G+
Sbjct: 410 EQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGY 469

Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISK- 521
             +G P   +Q F +++++  +P+E T    LS+C+    +    +    +     I   
Sbjct: 470 SQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPL 529

Query: 522 MSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
           M     MI ++ + G LD +         E +   W++L++    HG  + A   F A  
Sbjct: 530 MDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELA---FYAAD 586

Query: 581 DVGRIKP 587
            +  +KP
Sbjct: 587 RLLELKP 593



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 210/445 (47%), Gaps = 59/445 (13%)

Query: 40  ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
           AL +FV++    +  P  Y+L   L+AC    N   G Q+H Y ++ G  +   + N++ 
Sbjct: 163 ALEVFVEMLKLGRY-PSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLC 221

Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
            LY  + +L S  R F  I + +V +WTT +SAC +                        
Sbjct: 222 RLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAE------------------------ 257

Query: 160 MITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSG 218
                 +  Y ++G+ LF +M K +V  + ++  SV+S+C   L +  G+Q+     K G
Sbjct: 258 ------DENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIG 311

Query: 219 FSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV--------- 269
            +  + V N+ + +Y   G   +A ++FEE +      I++N M+ G A +         
Sbjct: 312 CATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSV--ITWNAMISGFAQIMDSAKDDLH 369

Query: 270 --GRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
              R  +AL  FRD++ ++++P   TF S++S C   +    G Q+HAQ +K+GF +   
Sbjct: 370 ARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVV 429

Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
           V++A + MY+ CG I+ A   F  +  + +V+W +MIS Y+Q      AI  + +M   G
Sbjct: 430 VNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAG 489

Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS------NALISAYAKNERIK 438
            +P+E TF SLL++  +  +VE   A  + + +     +         +I  + +  R+ 
Sbjct: 490 AKPNEITFVSLLSACSYAGLVE--EAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLD 547

Query: 439 QAYQIF--HNMSPRNIITWNTLING 461
            AY         P   I W++L+ G
Sbjct: 548 DAYAFIKRKGFEPNEAI-WSSLVAG 571



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 36/247 (14%)

Query: 32  SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
           +RS  +Q AL +F  +  S  +KPD+++ S+ L+ C+ +     G Q+HA  ++ G  + 
Sbjct: 370 ARSRGFQ-ALKIFRDLVRS-AMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSD 427

Query: 92  PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
             V + ++++Y     +    + F E+    + +WT+                       
Sbjct: 428 VVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTS----------------------- 464

Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFG-RQ 209
                   MI+G +++G     I LF +M     + +  +F S+LS C  AGL+E   R 
Sbjct: 465 --------MISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRY 516

Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
              +  +     L+     +I M+   G + DA   F + KG+  +   ++ ++ G  S 
Sbjct: 517 FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDA-YAFIKRKGFEPNEAIWSSLVAGCRSH 575

Query: 270 GRVEEAL 276
           G +E A 
Sbjct: 576 GNMELAF 582


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 168/505 (33%), Positives = 280/505 (55%), Gaps = 16/505 (3%)

Query: 237 GNVVDACKVFEEAKG---YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
           G++  A K+F + +    ++C     N M+ G A      EA+  +  M+   +     T
Sbjct: 59  GDLNYARKLFTQMQNPDPFIC-----NTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYT 113

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
           +  V++AC      ++G + H + +K+GF +   V NA I  Y +CG    AC +F    
Sbjct: 114 YPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDEST 173

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV-GIRPDEFTFGSLL---ASSGFIEMVE 406
            +D+V+WN MI+ +  + L   A     EM  +  +RPDE T  SL+   A  G +E  +
Sbjct: 174 VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGK 233

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
            +H++    G+  N++V+NA++  Y K + I+ A ++F+ +  +++++W ++++G   +G
Sbjct: 234 FLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSG 293

Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
           +  + L  F ++ ++++  DE TL   LS+CA+  +L  GK IH  + K  +   + L  
Sbjct: 294 YFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLET 353

Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
           A++ +YAKCG +D +L+VF  M  ++  +WNALI   A HG G++A+S F  M+   ++ 
Sbjct: 354 ALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEH-DKLM 412

Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
           PD  TF A+L ACSHAGLVD+G  +F +M N +   P  +H  C++DLL RA  +D+A  
Sbjct: 413 PDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALA 472

Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
            I +  I+A S  W  L  AC + G+  L   I   ++E E D    YV+LSN+YA    
Sbjct: 473 FIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQ 532

Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
           W+ A  +R+ +K  G+ K PGCSWI
Sbjct: 533 WDHALKLRKQMKNKGIEKTPGCSWI 557



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 248/497 (49%), Gaps = 29/497 (5%)

Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC--TENGYEDIGIG 175
           + NP   S      A +  G ++YA ++F +M + D  + N MI G   ++N YE   + 
Sbjct: 40  LHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYE--AVS 97

Query: 176 LFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYF 234
           L+  M +  V  DNY++  VL+ C   G ++ GR+ H  V K+GF   + V+NALI  Y 
Sbjct: 98  LYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYH 157

Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELT 293
           NCG+   AC VF+E+   V D +++N+M++   + G  E+A     +M  + +LRP E+T
Sbjct: 158 NCGSFGCACDVFDEST--VRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVT 215

Query: 294 FVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            VS++ AC        G  +H+ + + G +    V+NA + MY  C  I+ A  +F R++
Sbjct: 216 MVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIR 275

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
           EKD++SW +M+S  A+    + A+  + +MQ   I  DE T   +L   A +G ++  + 
Sbjct: 276 EKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKY 335

Query: 408 IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGF 467
           IH  +    I  ++ +  AL+  YAK   I  A Q+F  M  RN+ TWN LI G  ++G 
Sbjct: 336 IHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGH 395

Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN--NLISKMSLG 525
               +  F ++   +L PD+ T    L +C+    +  G  +    +KN   +  +M   
Sbjct: 396 GEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMF-QAMKNKFQIEPRMEHY 454

Query: 526 NAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
             ++ L  +   +D +L  + NM I+ +++ W  L+ A    G        F   + +GR
Sbjct: 455 GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGH-------FDLAEKIGR 507

Query: 585 ----IKPDQATFTAVLS 597
               ++PD      +LS
Sbjct: 508 RVIELEPDSCGRYVMLS 524



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 204/477 (42%), Gaps = 47/477 (9%)

Query: 56  DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
           D Y+    LAACA L     G + H   L+ G  +   V N ++  Y N           
Sbjct: 110 DNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNC---------- 159

Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
                       +F  AC          +VFD+   RD+  +N MI      G  +    
Sbjct: 160 -----------GSFGCAC----------DVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198

Query: 176 LFREMHKLD-VRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMY 233
           L  EM KLD +R D  +  S++  C   G LE G+ LHS   + G    + V NA++ MY
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMY 258

Query: 234 FNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
             C ++  A +VF   +    D +S+  M+ GLA  G  +EAL  F+ M +  +   E+T
Sbjct: 259 CKCDDIESAQEVFNRIREK--DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316

Query: 294 FVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ 350
            V V+SAC        G  +H    K        +  A + MY+ CG ID A  +F R++
Sbjct: 317 LVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR 376

Query: 351 EKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFI-EMVE 406
            +++ +WN +I   A    G  AI  + +M+   + PD+ TF +LL +   +G + E + 
Sbjct: 377 VRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLA 436

Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLN 465
           M  A      I   ++    ++    +  ++  A     NM  + N + W TL+ G   +
Sbjct: 437 MFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL-GACRS 495

Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSC-ARISSLRHGKQIHGYVLKNNLISK 521
           G      +     ++ EL PD     V LS+  A +S   H  ++    +KN  I K
Sbjct: 496 GGHFDLAEKIGRRVI-ELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQ-MKNKGIEK 550



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 164/363 (45%), Gaps = 45/363 (12%)

Query: 34  SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
            G  + A  L  ++     L+PD  ++ + + ACA L N   G  LH+Y+   GL     
Sbjct: 190 KGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLR 249

Query: 94  VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
           V N IL +Y    D+ S + VF+ I+  DV SWT+ LS   K G+   A  +F KM    
Sbjct: 250 VNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKM---- 305

Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHS 212
                                    +++K+++  D  +   VLS C   G L+ G+ +H 
Sbjct: 306 -------------------------QLNKIEL--DEITLVGVLSACAQTGALDQGKYIHL 338

Query: 213 LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRV 272
           L+ K   +C + +  AL+ MY  CG++  A +VF   +  V +  ++N ++ GLA  G  
Sbjct: 339 LIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR--VRNVFTWNALIGGLAMHGHG 396

Query: 273 EEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHA----QAMKSGFEAYTSVSN- 327
           E+A+  F  M    L P ++TF++++  C C   G         QAMK+ F+    + + 
Sbjct: 397 EDAISLFDQMEHDKLMPDDVTFIALL--CACSHAGLVDEGLAMFQAMKNKFQIEPRMEHY 454

Query: 328 -AAITMYSSCGKIDEACMIFARLQEK-DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
              + +     K+D+A      +  K + V W T++   A R+ G   +   +  + + +
Sbjct: 455 GCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLG--ACRSGGHFDLAEKIGRRVIEL 512

Query: 386 RPD 388
            PD
Sbjct: 513 EPD 515


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.135    0.402 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,675,353,010
Number of Sequences: 23463169
Number of extensions: 421683155
Number of successful extensions: 1240593
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7111
Number of HSP's successfully gapped in prelim test: 4438
Number of HSP's that attempted gapping in prelim test: 973275
Number of HSP's gapped (non-prelim): 74354
length of query: 733
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 583
effective length of database: 8,839,720,017
effective search space: 5153556769911
effective search space used: 5153556769911
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 81 (35.8 bits)