BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004733
(733 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/729 (54%), Positives = 530/729 (72%), Gaps = 10/729 (1%)
Query: 8 ATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAAC 67
+ IA NS T LL LN L L+RSG ++AL LF +H L+PD YS+S +
Sbjct: 12 SAIAENSTT----LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTA 67
Query: 68 ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWT 127
+LR+ FG Q+H YA+R+GL + HV+NT+LSLY+ +L S+K+ F EI PDVYSWT
Sbjct: 68 RHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWT 127
Query: 128 TFLSACTKMGHVDYACEVFDKMPDRD-LPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
T LSA K+G ++YA EVFDKMP+RD + ++NAMITGC E+GY + + LFREMHKL VR
Sbjct: 128 TLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVR 187
Query: 187 RDNYSFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF 246
D + FA++LS+CD G L+FG+Q+HSLV K+GF SVVNALITMYFNC VVDAC VF
Sbjct: 188 HDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVF 247
Query: 247 EEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV 306
EE V D +++NV++DGLA R +E+L+ FR ML ASLRP++LTFVSVM +C C +
Sbjct: 248 EETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
G+QVH A+K+G+E YT VSNA +TMYSS A +F L+EKD+V+WNTMIS+Y Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
LG+SA+ Y M +G++PDEFTFGSLLA+S ++++EM+ A + G+ + I++SNA
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNA 426
Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR-- 484
LISAY+KN +I++A +F +N+I+WN +I+GF NGFP +GL+ FS LL SE+R
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
PD YTLS LS C SSL G Q H YVL++ + +GNA+I +Y++CG + SL V
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
FN M EKD +SWN+LISAY++HGEG+ AV+ +K MQD G++ PD ATF+AVLSACSHAGL
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 605 VDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV--INSQHIQARSDNWWA 662
V++G IF+SMV +G I DH SC++DLLGRAG+LDEAE + I+ + I +R D WWA
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWA 666
Query: 663 LFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
LFSACAAHG+L+LG+++A LL+E+E+D PSVYV LSNIYA AG+W+EA R + G
Sbjct: 667 LFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGA 726
Query: 723 IKQPGCSWI 731
+KQ GCSW+
Sbjct: 727 MKQRGCSWM 735
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/711 (31%), Positives = 373/711 (52%), Gaps = 42/711 (5%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
++ LS++ +A+ LF ++ + P Y+ S+ L+AC + + G QLH L+ G
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVL-GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 88 LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
+ +V N ++SLY + +L+S + +FS
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFS------------------------------- 347
Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
M RD YN +I G ++ GY + + LF+ MH + D+ + AS++ C A G L
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
G+QLH+ TK GF+ + AL+ +Y C ++ A F E + V + + +NVM+
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE--VENVVLWNVMLVAY 465
Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYT 323
+ + + FR M + + P++ T+ S++ C+ +G Q+H+Q +K+ F+
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
V + I MY+ GK+D A I R KD+VSW TMI+ Y Q N A+ + +M
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 384 GIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
GIR DE + +++ ++ + + IHA ++G +++ NAL++ Y++ +I+++
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
Y F + I WN L++GF +G + L+ F + + + +T A+ + +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
++++ GKQ+H + K S+ + NA+I++YAKCG + + + F + K+ +SWNA+I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
+AY++HG G EA+ F M ++P+ T VLSACSH GLVD G F+SM ++YG
Sbjct: 766 NAYSKHGFGSEALDSFDQMIH-SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
P +H C++D+L RAG L A+ I I+ + W L SAC H N+ +G A
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
LLE E + + YVLLSN+YA + W+ R+ +K GV K+PG SWI
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 318/645 (49%), Gaps = 53/645 (8%)
Query: 39 DALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG--NQLHAYALRAGLKAYPHVAN 96
+ LFV++ S + P+ + S L AC + AF Q+HA L GL+ V N
Sbjct: 169 EVFGLFVRM-VSENVTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCN 226
Query: 97 TILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
++ LY ++ G VD A VFD + +D
Sbjct: 227 PLIDLY-------------------------------SRNGFVDLARRVFDGLRLKDHSS 255
Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVT 215
+ AMI+G ++N E I LF +M+ L + Y+F+SVLS C LE G QLH LV
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
K GFS V NAL+++YF+ GN++ A +F D ++YN +++GL+ G E+A
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR--DAVTYNTLINGLSQCGYGEKA 373
Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITM 332
+ F+ M + L P T S++ AC G Q+HA K GF + + A + +
Sbjct: 374 MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNL 433
Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
Y+ C I+ A F + +++V WN M+ Y + R++ + +MQ I P+++T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 393 GSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
S+L + G +E+ E IH+ + N V + LI YAK ++ A+ I +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
+++++W T+I G+ F + L F ++L +R DE L+ A+S+CA + +L+ G+QI
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 510 HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG 569
H + S + NA++TLY++CG ++ S F D I+WNAL+S + Q G
Sbjct: 614 HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 570 KEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS 629
+EA+ F M G I + TF + + A S + G ++ +++ G+ + +
Sbjct: 674 EEALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCN 731
Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHG 671
++ + + G + +AE+ Q ++ + N W A+ +A + HG
Sbjct: 732 ALISMYAKCGSISDAEK----QFLEVSTKNEVSWNAIINAYSKHG 772
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 169/597 (28%), Positives = 286/597 (47%), Gaps = 24/597 (4%)
Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA 201
A +VFD+MP+R + +N MI GLF M +V + +F+ VL C
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 202 GLLEFG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
G + F Q+H+ + G V N LI +Y G V A +VF+ + + DH S+
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR--LKDHSSW 256
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMK 316
M+ GL+ EA+ F DM V + P+ F SV+SAC +G Q+H +K
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
GF + T V NA +++Y G + A IF+ + ++D V++NT+I+ +Q G A+
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 377 YLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAK 433
+ M G+ PD T SL+ ++ G + + +HA+ G +N ++ AL++ YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 434 NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVA 493
I+ A F N++ WN ++ + L + F ++ + E+ P++YT
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 494 LSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
L +C R+ L G+QIH ++K N + + +I +YAK G LD + + KD
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
+SW +I+ Y Q+ +A++ F+ M D G I+ D+ T +SAC+ + +G +I
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSACAAHG 671
GF + ++ L R G ++E+ + + +A DN W AL S G
Sbjct: 616 QACVS-GFSSDLPFQNALVTLYSRCGKIEES--YLAFEQTEA-GDNIAWNALVSGFQQSG 671
Query: 672 NLRLG-RIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
N R+ + + RE + + S + AA+ E AN+++ + VI + G
Sbjct: 672 NNEEALRVF--VRMNREGIDNNNFTFGSAVKAAS----ETANMKQGKQVHAVITKTG 722
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 232/473 (49%), Gaps = 13/473 (2%)
Query: 185 VRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDA 242
+R ++ + +L C G L+ GR+LHS + K G + L Y G++ A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 243 CKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL 302
KVF+E ++N M+ LAS + E F M+ ++ P+E TF V+ AC
Sbjct: 140 FKVFDEMPERTI--FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 303 CPRVGY----QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWN 358
V + Q+HA+ + G T V N I +YS G +D A +F L+ KD SW
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 359 TMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFIN 415
MIS ++ AI + +M +GI P + F S+L++ IE +E+ +H V
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 416 GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHF 475
G ++ V NAL+S Y + A IF NMS R+ +T+NTLING G+ + ++ F
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 476 SELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKC 535
+ + L PD TL+ + +C+ +L G+Q+H Y K S + A++ LYAKC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 536 GDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAV 595
D++ +L F ++ + WN ++ AY + + + F+ MQ + I P+Q T+ ++
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSI 496
Query: 596 LSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
L C G ++ G +I ++ F S ++D+ + G LD A ++
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKT-NFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N ++ +SG+ ++AL +FV+++ + + ++ + + A + N G Q+HA
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNR-EGIDNNNFTFGSAVKAASETANMKQGKQVHAVIT 719
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G + V N ++S+Y + ++ F E+ + SW ++A +K G A +
Sbjct: 720 KTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALD 779
Query: 145 VFDKMPDRDLPVYNAMITG----CTENGYEDIGIGLFREMH 181
FD+M ++ + + G C+ G D GI F M+
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/710 (32%), Positives = 374/710 (52%), Gaps = 42/710 (5%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
L SR G Q+A LF+ IH ++ D S+ L A L + FG QLH ++ G
Sbjct: 65 LFGFSRDGRTQEAKRLFLNIHRLG-MEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 88 LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
V +++ Y + ++VF D
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVF-------------------------------D 152
Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEF 206
+M +R++ + +I+G N D + LF M + ++++FA+ L V + G+
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
G Q+H++V K+G + V N+LI +Y CGNV A +F++ + V +++N M+ G
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE--VKSVVTWNSMISGY 270
Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYT 323
A+ G EAL F M + +R SE +F SV+ C R Q+H +K GF
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
++ A + YS C + +A +F + ++VSW MIS + Q + A+ + EM+
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 383 VGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
G+RP+EFT+ +L + I E +HA V + V AL+ AY K ++++A +
Sbjct: 391 KGVRPNEFTYSVILTALPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAK 449
Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI-S 501
+F + ++I+ W+ ++ G+ G ++ F EL ++P+E+T S L+ CA +
Sbjct: 450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 509
Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
S+ GKQ HG+ +K+ L S + + +A++T+YAK G+++ + VF EKD +SWN++IS
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
YAQHG+ +A+ FK M+ ++K D TF V +AC+HAGLV++G + FD MV D
Sbjct: 570 GYAQHGQAMKALDVFKEMKK-RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKI 628
Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
P ++H SCM+DL RAG L++A +VI + A S W + +AC H LGR+ A
Sbjct: 629 APTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAE 688
Query: 682 LLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
++ + + + YVLLSN+YA +G W+E A +R+L+ V K+PG SWI
Sbjct: 689 KIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 171/595 (28%), Positives = 291/595 (48%), Gaps = 33/595 (5%)
Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV--- 198
A +FDK P RD Y +++ G + +G LF +H+L + D F+SVL V
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 199 -CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
CD FGRQLH K GF VSV +L+ Y N D KVF+E K + +
Sbjct: 106 LCDE---LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER--NVV 160
Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
++ ++ G A +E L F M +P+ TF + + V G QVH
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
+K+G + VSN+ I +Y CG + +A ++F + + K +V+WN+MIS YA L A+
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 375 LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
+ M+ +R E +F S++ A+ + E +H V G + + + AL+ AY
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
+K + A ++F + N+++W +I+GFL N + + FSE+ +RP+E+T
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
SV L++ IS ++H V+K N ++G A++ Y K G ++ + +VF+ + +
Sbjct: 401 SVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
KD ++W+A+++ YAQ GE + A+ F + G IKP++ TF+++L+ C+ +
Sbjct: 457 KDIVAWSAMLAGYAQTGETEAAIKMFGELTK-GGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAH 670
F + S +L + + G ++ AE V Q + +W ++ S A H
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574
Query: 671 GNLRLGRIIAGLLLEREQDKPSVY---VLLSNIYAA---AGLWEEAANIRELLKR 719
G+ + L + +E K V V ++AA AGL EE +++ R
Sbjct: 575 -----GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 196/365 (53%), Gaps = 10/365 (2%)
Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-- 298
+A +F+++ G D SY ++ G + GR +EA F ++ + F SV+
Sbjct: 45 NAHNLFDKSPGR--DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 299 SACLCPRV-GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
SA LC + G Q+H Q +K GF SV + + Y + +F ++E+++V+W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS---LLASSGFIEMVEMIHAFVFI 414
T+IS YA+ ++ + ++ MQ+ G +P+ FTF + +LA G +H V
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
NG+ I VSN+LI+ Y K +++A +F ++++TWN++I+G+ NG ++ L
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
F + ++ +R E + + + CA + LR +Q+H V+K + ++ A++ Y+K
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342
Query: 535 CGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFT 593
C + +LR+F + + +SW A+IS + Q+ +EAV F M+ G ++P++ T++
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYS 401
Query: 594 AVLSA 598
+L+A
Sbjct: 402 VILTA 406
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 146/291 (50%), Gaps = 5/291 (1%)
Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
S ++ A +F + +D S+ +++ +++ + A +L + +G+ D F S
Sbjct: 39 SSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 395 LLASSGFI--EMV-EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN 451
+L S + E+ +H G + ++ V +L+ Y K K ++F M RN
Sbjct: 99 VLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERN 158
Query: 452 IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHG 511
++TW TLI+G+ N + L F + +P+ +T + AL A G Q+H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 512 YVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
V+KN L + + N++I LY KCG++ + +F+ K ++WN++IS YA +G E
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
A+ F +M+ + ++ +++F +V+ C++ + ++ S+V YGF+
Sbjct: 279 ALGMFYSMR-LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK-YGFL 327
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/706 (32%), Positives = 381/706 (53%), Gaps = 64/706 (9%)
Query: 53 LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSV 111
+KPD Y+ L A A+L++ G Q+HA+ + G VANT+++LY+ D +V
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG-CTENGYE 170
+VF D++ +R+ +N++I+ C+ +E
Sbjct: 153 YKVF-------------------------------DRISERNQVSWNSLISSLCSFEKWE 181
Query: 171 DIGIGLFREMHKLDVRRDNYSFASVLSVCD-----AGLLEFGRQLHSLVTKSGFSCLVSV 225
+ + FR M +V +++ SV++ C GL+ G+Q+H+ + G +
Sbjct: 182 -MALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM-MGKQVHAYGLRKG-ELNSFI 238
Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
+N L+ MY G + + + G D +++N ++ L ++ EAL R+M++
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGR--DLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 286 SLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDE 341
+ P E T SV+ AC R G ++HA A+K+G + + V +A + MY +C ++
Sbjct: 297 GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLS 356
Query: 342 ACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ-SVGIRPDEFTFGSLLAS-- 398
+F + ++ I WN MI+ Y+Q + A+L ++ M+ S G+ + T ++ +
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 399 -SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
SG E IH FV G+ + V N L+ Y++ +I A +IF M R+++TWNT
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 458 LINGFLLNGFPVQGLQHFSELLMSE-----------LRPDEYTLSVALSSCARISSLRHG 506
+I G++ + L ++ E L+P+ TL L SCA +S+L G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 507 KQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQH 566
K+IH Y +KNNL + +++G+A++ +YAKCG L S +VF+ + +K+ I+WN +I AY H
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 567 GEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAED 626
G G+EA+ + M G +KP++ TF +V +ACSH+G+VD+G RIF M DYG P+ D
Sbjct: 597 GNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSD 655
Query: 627 HLSCMLDLLGRAGYLDEAERVINSQHIQ-ARSDNWWALFSACAAHGNLRLGRIIAGLLLE 685
H +C++DLLGRAG + EA +++N ++ W +L A H NL +G I A L++
Sbjct: 656 HYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ 715
Query: 686 REQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
E + S YVLL+NIY++AGLW++A +R +K GV K+PGCSWI
Sbjct: 716 LEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWI 761
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 197/387 (50%), Gaps = 13/387 (3%)
Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYT-SVSN 327
+ EA++ + DM+V ++P F +++ A + +G Q+HA K G+ + +V+N
Sbjct: 78 LREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVAN 137
Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
+ +Y CG +F R+ E++ VSWN++IS+ A+ A+ M + P
Sbjct: 138 TLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEP 197
Query: 388 DEFTFGSLLASSGFIEMVE------MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
FT S++ + + M E +HA+ G + + + N L++ Y K ++ +
Sbjct: 198 SSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSK 256
Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
+ + R+++TWNT+++ N ++ L++ E+++ + PDE+T+S L +C+ +
Sbjct: 257 VLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLE 316
Query: 502 SLRHGKQIHGYVLKNNLISKMS-LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
LR GK++H Y LKN + + S +G+A++ +Y C + RVF+ M ++ WNA+I
Sbjct: 317 MLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMI 376
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
+ Y+Q+ KEA+ F M++ + + T V+ AC +G I +V G
Sbjct: 377 AGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK-RG 435
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERV 647
+ ++D+ R G +D A R+
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 142/269 (52%), Gaps = 9/269 (3%)
Query: 350 QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM-- 407
Q + W ++ + + NL R A+L Y++M +GI+PD + F +LL + ++ +E+
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 408 -IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
IHA V+ G + ++ V+N L++ Y K Y++F +S RN ++WN+LI+
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSF 177
Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI---SSLRHGKQIHGYVLKNNLISKM 522
L+ F +L + P +TL +++C+ + L GKQ+H Y L+ ++
Sbjct: 178 EKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF 237
Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV 582
+ N ++ +Y K G L S + +D ++WN ++S+ Q+ + EA+ + M
Sbjct: 238 II-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE 296
Query: 583 GRIKPDQATFTAVLSACSHAGLVDDGTRI 611
G ++PD+ T ++VL ACSH ++ G +
Sbjct: 297 G-VEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 139/280 (49%), Gaps = 27/280 (9%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ--LHAY 82
N +A S++ H ++AL LF+ + S L + +++ + AC +R+ AF + +H +
Sbjct: 373 NAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC--VRSGAFSRKEAIHGF 430
Query: 83 ALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
++ GL V NT++ +Y + R+F ++++ D+ +W T ++ H + A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDA 490
Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA- 201
+ KM + + V ++ ++ ++ + ++L C A
Sbjct: 491 LLLLHKMQNLERKVSKG--------------------ASRVSLKPNSITLMTILPSCAAL 530
Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
L G+++H+ K+ + V+V +AL+ MY CG + + KVF++ + I++NV
Sbjct: 531 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK--NVITWNV 588
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
++ G +EA+ R M+V ++P+E+TF+SV +AC
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/649 (33%), Positives = 347/649 (53%), Gaps = 11/649 (1%)
Query: 91 YPHVANTILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
Y H A +L + ++L + VF + + T +S + G VD A VF+ +
Sbjct: 36 YEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPI 95
Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
+ +Y+ M+ G + D + F M DV Y+F +L VC D L G+
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
++H L+ KSGFS + + L MY C V +A KVF+ D +S+N ++ G +
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER--DLVSWNTIVAGYSQ 213
Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSV 325
G AL + M +L+PS +T VSV+ A R VG ++H AM+SGF++ ++
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 273
Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
S A + MY+ CG ++ A +F + E+++VSWN+MI Y Q + A+L + +M G+
Sbjct: 274 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 386 RPDEFT-FGSLLASS--GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQ 442
+P + + G+L A + G +E IH G+ N+ V N+LIS Y K + + A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
+F + R +++WN +I GF NG P+ L +FS++ ++PD +T +++ A +S
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
H K IHG V+++ L + + A++ +YAKCG + + +F+MM E+ +WNA+I
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
Y HG GK A+ F+ MQ G IKP+ TF +V+SACSH+GLV+ G + F M +Y
Sbjct: 514 YGTHGFGKAALELFEEMQK-GTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 623 PAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGL 682
+ DH M+DLLGRAG L+EA I ++ + + A+ AC H N+ A
Sbjct: 573 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 632
Query: 683 LLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
L E D +VLL+NIY AA +WE+ +R + R G+ K PGCS +
Sbjct: 633 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/589 (24%), Positives = 275/589 (46%), Gaps = 52/589 (8%)
Query: 23 KLNI----SLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
KLN+ L ++ AL FV++ ++P +Y+ + L C + G +
Sbjct: 98 KLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD-DVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 79 LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
+H +++G + ++Y R + ++VF + D+ SW T
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNT---------- 206
Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
++ G ++NG + + + + M + +++ + SVL
Sbjct: 207 ---------------------IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 199 CDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
A L+ G+++H +SGF LV++ AL+ MY CG++ A ++F+ + +
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER--NVV 303
Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQA 314
S+N M+D +EA++ F+ ML ++P++++ + + AC G +H +
Sbjct: 304 SWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLS 363
Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
++ G + SV N+ I+MY C ++D A +F +LQ + +VSWN MI +AQ A+
Sbjct: 364 VELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDAL 423
Query: 375 LAYLEMQSVGIRPDEFTFGSL---LASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
+ +M+S ++PD FT+ S+ +A + IH V + + N+ V+ AL+ Y
Sbjct: 424 NYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
AK I A IF MS R++ TWN +I+G+ +GF L+ F E+ ++P+ T
Sbjct: 484 AKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFL 543
Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN--AMITLYAKCGDLDCSLRVFNMMI 549
+S+C+ + G + Y++K N ++S+ + AM+ L + G L+ + M
Sbjct: 544 SVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 550 EKDTIS-WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
K ++ + A++ A H K KA + + + PD + +L+
Sbjct: 603 VKPAVNVYGAMLGACQIH---KNVNFAEKAAERLFELNPDDGGYHVLLA 648
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 229/494 (46%), Gaps = 49/494 (9%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L+ N +A S++G + AL + V+ LKP ++ + L A + LR + G ++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEM-VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
YA+R+G + +++ ++ +Y L + +++F
Sbjct: 260 GYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF------------------------- 294
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
D M +R++ +N+MI +N + +F++M V+ + S L C
Sbjct: 295 ------DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
D G LE GR +H L + G VSVVN+LI+MY C V A +F + + +S+
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL--VSW 406
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ---VHAQAMK 316
N M+ G A GR +AL F M +++P T+VSV++A + + +H M+
Sbjct: 407 NAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR 466
Query: 317 SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
S + V+ A + MY+ CG I A +IF + E+ + +WN MI Y G++A+
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALEL 526
Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVS----NALISAYA 432
+ EMQ I+P+ TF S++++ +VE ++ +I++S A++
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYT 489
+ R+ +A+ M + + + G +L + +F+E + EL PD+
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVN----VYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 490 LSVALSSCARISSL 503
V L++ R +S+
Sbjct: 643 YHVLLANIYRAASM 656
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 243/741 (32%), Positives = 391/741 (52%), Gaps = 55/741 (7%)
Query: 5 RITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLF--VQIHSSHKLKPDIYSLST 62
+I AT + S E L+ N + +L +S Y++AL F Q +SS K++ Y +
Sbjct: 17 QILATSSVVSTIKTEELM--NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--S 72
Query: 63 TLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPD 122
+ AC++ R+ A G ++H + L + K + N ILS+Y
Sbjct: 73 LICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG------------------- 113
Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
K G + A EVFD MP+R+L Y ++ITG ++NG I L+ +M +
Sbjct: 114 ------------KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ 161
Query: 183 LDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
D+ D ++F S++ C D GL G+QLH+ V K S + NALI MY
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGL---GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSV 297
+ DA +VF + D IS++ ++ G + +G EAL ++ML P+E F S
Sbjct: 219 MSDASRVFYGIP--MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 298 MSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
+ AC L P G Q+H +KS + MY+ CG ++ A +F +++ D
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVE--MIHAF 411
SWN +I+ A A+ + +M+S G PD + SLL A + + + + IH++
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM-SPRNIITWNTLINGFLLNGFPVQ 470
+ G + ++ V N+L++ Y + + +F + + + ++WNT++ L + PV+
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVE 456
Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
L+ F +L+SE PD T+ L C ISSL+ G Q+H Y LK L + + N +I
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLID 516
Query: 531 LYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQA 590
+YAKCG L + R+F+ M +D +SW+ LI YAQ G G+EA+ FK M+ G I+P+
Sbjct: 517 MYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG-IEPNHV 575
Query: 591 TFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
TF VL+ACSH GLV++G +++ +M ++G P ++H SC++DLL RAG L+EAER I+
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 651 QHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEA 710
++ W L SAC GN+ L + A +L+ + + +VLL +++A++G WE A
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 711 ANIRELLKRTGVIKQPGCSWI 731
A +R +K+ V K PG SWI
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWI 716
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/716 (31%), Positives = 370/716 (51%), Gaps = 47/716 (6%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N L SG+ ++A+ L S K D +L + L CA+ ++ G ++ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLC---VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
G ++ + + +Y N DL RVF E++ W ++ K G D++
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSG- 178
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV-LSVCDAGL 203
IGLF++M V D+Y+F+ V S
Sbjct: 179 ----------------------------SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
+ G QLH + KSGF SV N+L+ Y V A KVF+E D IS+N ++
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER--DVISWNSII 268
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
+G S G E+ L F MLV+ + T VSV + C R +G VH+ +K+ F
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFS 328
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
N + MYS CG +D A +F + ++ +VS+ +MI+ YA+ L A+ + EM
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
+ GI PD +T ++L A ++ + +H ++ N + +I VSNAL+ YAK +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSM 448
Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR--PDEYTLSVALS 495
++A +F M ++II+WNT+I G+ N + + L F+ LL+ E R PDE T++ L
Sbjct: 449 QEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN-LLLEEKRFSPDERTVACVLP 507
Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
+CA +S+ G++IHGY+++N S + N+++ +YAKCG L + +F+ + KD +S
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
W +I+ Y HG GKEA++ F M+ G I+ D+ +F ++L ACSH+GLVD+G R F+ M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWRFFNIM 626
Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
++ P +H +C++D+L R G L +A R I + I + W AL C H +++L
Sbjct: 627 RHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKL 686
Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+A + E E + YVL++NIYA A WE+ +R+ + + G+ K PGCSWI
Sbjct: 687 AEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWI 742
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 249/498 (50%), Gaps = 12/498 (2%)
Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQ 209
DR + N + E+G + + L K D+ D + SVL +C D+ L+ G++
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKE 115
Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
+ + + +GF ++ + L MY NCG++ +A +VF+E K + + +N++M+ LA
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK--IEKALFWNILMNELAKS 173
Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSV---MSACLCPRVGYQVHAQAMKSGFEAYTSVS 326
G ++ F+ M+ + + TF V S+ G Q+H +KSGF SV
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
N+ + Y ++D A +F + E+D++SWN++I+ Y L + +++M GI
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE 293
Query: 387 PDEFTFGSLLA---SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
D T S+ A S I + +H+ + N L+ Y+K + A +
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAV 353
Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
F MS R+++++ ++I G+ G + ++ F E+ + PD YT++ L+ CAR L
Sbjct: 354 FREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLL 413
Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
GK++H ++ +N+L + + NA++ +YAKCG + + VF+ M KD ISWN +I Y
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
+++ EA+S F + + R PD+ T VL AC+ D G I ++ + G+
Sbjct: 474 SKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN-GYFS 532
Query: 624 AEDHLSCMLDLLGRAGYL 641
+ ++D+ + G L
Sbjct: 533 DRHVANSLVDMYAKCGAL 550
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 157/591 (26%), Positives = 283/591 (47%), Gaps = 51/591 (8%)
Query: 19 ELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQ 78
E L NI + L++SG + ++ LF ++ SS ++ D Y+ S + ++LR+ G Q
Sbjct: 158 EKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHGGEQ 216
Query: 79 LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH 138
LH + L++G V N++++ Y + + S ++VF E+ DV SW
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISW------------ 264
Query: 139 VDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV 198
N++I G NG + G+ +F +M + D + SV +
Sbjct: 265 -------------------NSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 199 C-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
C D+ L+ GR +HS+ K+ FS N L+ MY CG++ A VF E +
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV--V 363
Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQA 314
SY M+ G A G EA+ F +M + P T +V++ C R+ G +VH
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 315 MKS--GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
++ GF+ + VSNA + MY+ CG + EA ++F+ ++ KDI+SWNT+I Y++
Sbjct: 424 KENDLGFDIF--VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 373 AI-LAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
A+ L L ++ PDE T +L AS + IH ++ NG ++ V+N+L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
YAK + A+ +F +++ +++++W +I G+ ++GF + + F+++ + + DE
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLR-VFN 546
+ L +C+ + G + + I A ++ + A+ GDL + R + N
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIEN 661
Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
M I D W AL+ H + K A K + V ++P+ + +++
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAE---KVAEKVFELEPENTGYYVLMA 709
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust.
Identities = 229/711 (32%), Positives = 367/711 (51%), Gaps = 39/711 (5%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N +A R+ +Y LF ++ + KPD Y+ S+ LAACA+L FG + A +
Sbjct: 220 NTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACASLEKLRFGKVVQARVI 278
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G + DV+ T + K GH+ A E
Sbjct: 279 KCGAE--------------------------------DVFVCTAIVDLYAKCGHMAEAME 306
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
VF ++P+ + + M++G T++ + +F+EM V +N + SV+S C +
Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSM 366
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
+ Q+H+ V KSGF SV ALI+MY G++ + +VFE+ +I NVM+
Sbjct: 367 VCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNI-VNVMI 425
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYT 323
+ + +A+ F ML LR E + S++S C +G QVH +KSG
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
+V ++ T+YS CG ++E+ +F + KD W +MIS + + R AI + EM
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 384 GIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
G PDE T ++L +S + + IH + GI + + +AL++ Y+K +K A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
Q++ + + ++ ++LI+G+ +G G F +++MS D + +S L + A
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
G Q+H Y+ K L ++ S+G++++T+Y+K G +D + F+ + D I+W ALI
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
++YAQHG+ EA+ + M++ G KPD+ TF VLSACSH GLV++ +SMV DYG
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKG-FKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYG 784
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
P H CM+D LGR+G L EAE IN+ HI+ + W L +AC HG + LG++ A
Sbjct: 785 IEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAA 844
Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+E E Y+ LSNI A G W+E R+L+K TGV K+PG S +
Sbjct: 845 KKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 189/712 (26%), Positives = 348/712 (48%), Gaps = 59/712 (8%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
NI ++ + ++++L F ++H + + S + ++AC+ L+ F + + +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHF-LGFEANEISYGSVISACSALQAPLFSELVCCHTI 177
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G Y V + ++ ++ +VF + + +VY W T ++ + + +Y
Sbjct: 178 KMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALR--NQNYGA- 234
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
VFD LF EM + D+Y+++SVL+ C A L
Sbjct: 235 VFD----------------------------LFHEMCVGFQKPDSYTYSSVLAAC-ASLE 265
Query: 204 -LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
L FG+ + + V K G V V A++ +Y CG++ +A +VF +S+ VM
Sbjct: 266 KLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV--VSWTVM 322
Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGF 319
+ G AL F++M + + + T SV+SAC P + QVHA KSGF
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARL---QEKDIVSWNTMISTYAQRNLGRSAILA 376
+SV+ A I+MYS G ID + +F L Q ++IV N MI++++Q AI
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRL 440
Query: 377 YLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
+ M G+R DEF+ SLL+ + + + +H + +G++ ++ V ++L + Y+K
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
++++Y++F + ++ W ++I+GF G+ + + FSE+L PDE TL+ L+
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
C+ SL GK+IHGY L+ + M LG+A++ +Y+KCG L + +V++ + E D +S
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
++LIS Y+QHG ++ F+ M G D +++L A + + G ++ + +
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSG-FTMDSFAISSILKAAALSDESSLGAQV-HAYI 678
Query: 617 NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALFSACAAHGNL 673
G S +L + + G +D+ + IN + A W AL ++ A HG
Sbjct: 679 TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA----WTALIASYAQHGKA 734
Query: 674 RLGRIIAGLLLER--EQDKPSVYVLLSNIYAAAGLWEEAA-NIRELLKRTGV 722
+ L+ E+ + DK + +LS + GL EE+ ++ ++K G+
Sbjct: 735 NEALQVYNLMKEKGFKPDKVTFVGVLSAC-SHGGLVEESYFHLNSMVKDYGI 785
Score = 222 bits (566), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 177/623 (28%), Positives = 306/623 (49%), Gaps = 36/623 (5%)
Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
DV+ + LS + G + A ++FD +P D+ N MI+G ++ + + F +MH
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 182 KLDVRRDNYSFASVLSVCDAGLLEFGRQL---HSLVTKSGFSCLVSVVNALITMYFNCGN 238
L + S+ SV+S C A +L H++ K G+ V +ALI ++
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTI--KMGYFFYEVVESALIDVFSKNLR 200
Query: 239 VVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM 298
DA KVF ++ + +N ++ G F +M V +P T+ SV+
Sbjct: 201 FEDAYKVFRDSLS--ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVL 258
Query: 299 SACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
+AC R G V A+ +K G E V A + +Y+ CG + EA +F+R+ +V
Sbjct: 259 AACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVV 317
Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFV 412
SW M+S Y + N SA+ + EM+ G+ + T S++++ G MV +HA+V
Sbjct: 318 SWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Query: 413 FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP---RNIITWNTLINGFLLNGFPV 469
F +G + V+ ALIS Y+K+ I + Q+F ++ +NI+ N +I F + P
Sbjct: 378 FKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPG 435
Query: 470 QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMI 529
+ ++ F+ +L LR DE+++ LS + L GKQ+HGY LK+ L+ +++G+++
Sbjct: 436 KAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLF 492
Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
TLY+KCG L+ S ++F + KD W ++IS + ++G +EA+ F M D G PD+
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG-TSPDE 551
Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
+T AVL+ CS + G I + G D S ++++ + G L A +V +
Sbjct: 552 STLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV---LLSNIYAAAGL 706
+ + + +L S + H G I G LL R+ + +S+I AA L
Sbjct: 611 -RLPELDPVSCSSLISGYSQH-----GLIQDGFLLFRDMVMSGFTMDSFAISSILKAAAL 664
Query: 707 WEEA---ANIRELLKRTGVIKQP 726
+E+ A + + + G+ +P
Sbjct: 665 SDESSLGAQVHAYITKIGLCTEP 687
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/712 (31%), Positives = 370/712 (51%), Gaps = 51/712 (7%)
Query: 35 GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANL--RNAAFGNQLHAYALRAGLKAYP 92
G Y+++L +F++ + K P+ Y LS+ + AC+ L R QL ++ +++G
Sbjct: 124 GIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF---- 179
Query: 93 HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
+ DVY T + K G++DYA VFD +P++
Sbjct: 180 ---------------------------DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEK 212
Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLH 211
+ MI+GC + G + + LF ++ + +V D Y ++VLS C LE G+Q+H
Sbjct: 213 STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIH 272
Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
+ + + G S++N LI Y CG V+ A K+F + IS+ ++ G
Sbjct: 273 AHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK--NIISWTTLLSGYKQNAL 330
Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNA 328
+EA+ F M L+P S++++C G QVHA +K+ + V+N+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG-----RSAILAYLEMQSV 383
I MY+ C + +A +F D+V +N MI Y++ LG A+ + +M+
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR--LGTQWELHEALNIFRDMRFR 448
Query: 384 GIRPDEFTFGSLLASSGFIE---MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
IRP TF SLL +S + + + IH +F G+ +I +ALI Y+ +K +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
+F M ++++ WN++ G++ + L F EL +S RPDE+T + +++ +
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
+S++ G++ H +LK L + NA++ +YAKCG + + + F+ +D + WN++I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
S+YA HGEGK+A+ + M G I+P+ TF VLSACSHAGLV+DG + F+ M+ +G
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEG-IEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FG 686
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
P +H CM+ LLGRAG L++A +I + + W +L S CA GN+ L A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746
Query: 681 GLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWIG 732
+ + + + +LSNIYA+ G+W EA +RE +K GV+K+PG SWIG
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIG 798
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 170/620 (27%), Positives = 303/620 (48%), Gaps = 29/620 (4%)
Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
D Y ++ ++ G + YA +VF+KMP+R+L ++ M++ C +G + + +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 182 KLDVRRDN---YSFASVLSVCDAGLLEFGR----QLHSLVTKSGFSCLVSVVNALITMYF 234
+ R+D+ Y +S + C +GL GR QL S + KSGF V V LI Y
Sbjct: 138 R--TRKDSPNEYILSSFIQAC-SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194
Query: 235 NCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF 294
GN+ A VF+ +++ M+ G +GR +L F ++ ++ P
Sbjct: 195 KDGNIDYARLVFDALPEK--STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYIL 252
Query: 295 VSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
+V+SAC + P + G Q+HA ++ G E S+ N I Y CG++ A +F +
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMI 408
K+I+SW T++S Y Q L + A+ + M G++PD + S+L S + + +
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
HA+ + + V+N+LI YAK + + A ++F + +++ +N +I G+ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 469 V---QGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
+ L F ++ +RP T L + A ++SL KQIHG + K L + G
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
+A+I +Y+ C L S VF+ M KD + WN++ + Y Q E +EA++ F +Q + R
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ-LSRE 551
Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
+PD+ TF +++A + V G F + G + +LD+ + G ++A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 646 RVINSQHIQARSDN--WWALFSACAAHGNLRLG-RIIAGLLLEREQDKPSVYVLLSNIYA 702
+ +S A D W ++ S+ A HG + +++ ++ E + +V + + +
Sbjct: 611 KAFDS---AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACS 667
Query: 703 AAGLWEEAANIRELLKRTGV 722
AGL E+ EL+ R G+
Sbjct: 668 HAGLVEDGLKQFELMLRFGI 687
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 218/427 (51%), Gaps = 20/427 (4%)
Query: 187 RDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
R FA +L + LL + +H + G + N LI +Y G +V A KV
Sbjct: 42 RGRREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKV 101
Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VASLRPSELTFVSVMSAC--L 302
FE+ + +S++ M+ G EE+L+ F + P+E S + AC L
Sbjct: 102 FEKMPER--NLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL 159
Query: 303 CPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNT 359
R + +Q+ + +KSGF+ V I Y G ID A ++F L EK V+W T
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTT 219
Query: 360 MISTYAQRNLGRS--AILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFI 414
MIS + +GRS ++ + ++ + PD + ++L++ F+E + IHA +
Sbjct: 220 MISGCVK--MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR 277
Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
G+ + + N LI +Y K R+ A+++F+ M +NII+W TL++G+ N + ++
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK 534
F+ + L+PD Y S L+SCA + +L G Q+H Y +K NL + + N++I +YAK
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAK 397
Query: 535 CGDLDCSLRVFNMMIEKDTISWNALISAYAQHG---EGKEAVSCFKAMQDVGRIKPDQAT 591
C L + +VF++ D + +NA+I Y++ G E EA++ F+ M+ I+P T
Sbjct: 398 CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR-FRLIRPSLLT 456
Query: 592 FTAVLSA 598
F ++L A
Sbjct: 457 FVSLLRA 463
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 213/445 (47%), Gaps = 52/445 (11%)
Query: 34 SGHYQDALH-----LFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGL 88
SG+ Q+ALH LF + S LKPD+Y+ S+ L +CA+L FG Q+HAY ++A L
Sbjct: 323 SGYKQNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANL 381
Query: 89 KAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
+V N+++ +Y L ++ VFD
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARK-------------------------------VFDI 410
Query: 149 MPDRDLPVYNAMITGCTENGYE---DIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE 205
D+ ++NAMI G + G + + +FR+M +R +F S+L A L
Sbjct: 411 FAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA-SASLTS 469
Query: 206 FG--RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
G +Q+H L+ K G + + +ALI +Y NC + D+ VF+E K V D + +N M
Sbjct: 470 LGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK--VKDLVIWNSMF 527
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFE 320
G EEAL F ++ ++ RP E TF ++++A ++G + H Q +K G E
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
++NA + MY+ CG ++A F +D+V WN++IS+YA G+ A+ +M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 381 QSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
S GI P+ TF +L++ +G +E + GI + ++S + R+
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRL 707
Query: 438 KQAYQIFHNMSPRN-IITWNTLING 461
+A ++ M + I W +L++G
Sbjct: 708 NKARELIEKMPTKPAAIVWRSLLSG 732
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 165/308 (53%), Gaps = 7/308 (2%)
Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
VH Q + G E T +SN I +YS G + A +F ++ E+++VSW+TM+S +
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 370 GRSAILAYLEM-QSVGIRPDEFTFGSLLASSGFIE-----MVEMIHAFVFINGIITNIQV 423
+++ +LE ++ P+E+ S + + ++ MV + +F+ +G ++ V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
LI Y K+ I A +F + ++ +TW T+I+G + G LQ F +L+ +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
PD Y LS LS+C+ + L GKQIH ++L+ L SL N +I Y KCG + + +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
+FN M K+ ISW L+S Y Q+ KEA+ F +M G +KPD +++L++C+
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCASLH 364
Query: 604 LVDDGTRI 611
+ GT++
Sbjct: 365 ALGFGTQV 372
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 503 LRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISA 562
L + +HG ++ L L N +I LY++ G + + +VF M E++ +SW+ ++SA
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI---FDSMVNDY 619
HG +E++ F + P++ ++ + ACS GL G + S +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKS 177
Query: 620 GFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
GF + ++D + G +D A V ++ + + W + S C G
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGCVKMG 228
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 221/730 (30%), Positives = 374/730 (51%), Gaps = 58/730 (7%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L + N +++ SR+ Y + L F+++ S+ L PD ++ + ACA + + G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
++ GL V N ++S Y G V
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTH-------------------------------GFVT 239
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD----VRRDNYSFASVL 196
A ++FD MP+R+L +N+MI ++NG+ + L EM + + D + +VL
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 197 SVC----DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
VC + GL G+ +H K + + NAL+ MY CG + +A +F+
Sbjct: 300 PVCAREREIGL---GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVA--SLRPSELTFVSVMSAC----LCPRV 306
+ +S+N M+ G ++ G R ML ++ E+T ++ + C P +
Sbjct: 357 --NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
++H ++K F V+NA + Y+ CG + A +F ++ K + SWN +I +AQ
Sbjct: 415 K-ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQV 423
N R ++ A+L+M+ G+ PD FT SLL++ ++ + + +H F+ N + ++ V
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
+++S Y + +F M +++++WNT+I G+L NGFP + L F ++++ +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
+ ++ +C+ + SLR G++ H Y LK+ L + ++I +YAK G + S +
Sbjct: 594 QLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSK 653
Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
VFN + EK T SWNA+I Y HG KEA+ F+ MQ G PD TF VL+AC+H+G
Sbjct: 654 VFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSG 712
Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN--WW 661
L+ +G R D M + +G P H +C++D+LGRAG LD+A RV+ ++ + +D W
Sbjct: 713 LIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVV-AEEMSEEADVGIWK 771
Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
+L S+C H NL +G +A L E E +KP YVLLSN+YA G WE+ +R+ +
Sbjct: 772 SLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMS 831
Query: 722 VIKQPGCSWI 731
+ K GCSWI
Sbjct: 832 LRKDAGCSWI 841
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 279/575 (48%), Gaps = 30/575 (5%)
Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
+ ++N DV T ++ G D + VFD + ++L +NA+I+ + N D +
Sbjct: 114 TRLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLE 172
Query: 176 LFREM-HKLDVRRDNYSFASVLSVCDAGLLEFGRQL--HSLVTKSGFSCLVSVVNALITM 232
F EM D+ D++++ V+ C AG+ + G L H LV K+G V V NAL++
Sbjct: 173 TFIEMISTTDLLPDHFTYPCVIKAC-AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV----ASLR 288
Y G V DA ++F+ + +S+N M+ + G EE+ + +M+ +
Sbjct: 232 YGTHGFVTDALQLFDIMPER--NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM 289
Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
P T V+V+ C R +G VH A+K + ++NA + MYS CG I A MI
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349
Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG--IRPDEFTFGSLLA---SSG 400
F K++VSWNTM+ ++ +M + G ++ DE T + +
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 409
Query: 401 FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
F+ ++ +H + + N V+NA +++YAK + A ++FH + + + +WN LI
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
G + P L ++ +S L PD +T+ LS+C+++ SLR GK++HG++++N L
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
+ + ++++LY CG+L +F+ M +K +SWN +I+ Y Q+G A+ F+ M
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTR----IFDSMVNDYGFIPAEDHLSCMLDLLG 636
G I+ + V ACS + G ++ D FI ++D+
Sbjct: 590 LYG-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS-----LIDMYA 643
Query: 637 RAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
+ G + ++ +V N + + +W A+ HG
Sbjct: 644 KNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHG 677
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 247/797 (30%), Positives = 403/797 (50%), Gaps = 98/797 (12%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAA--FGNQLH----- 80
++ SR+G +++AL +F++ + + Y+ + L AC + + FG Q+H
Sbjct: 74 VSGYSRNGEHKEAL-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 81 -AYALRA--------------GLKAYPHVA------------NTILSLYKNARDLVSVKR 113
+YA+ A G Y A N+I+S+Y A D S R
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 114 VFSEIQ----------------------NPDV-------------------YSWTTFLSA 132
+FS +Q PDV + + +SA
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSA 252
Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKL-DVRRDNY- 190
K G + YA +VF++M R+ N ++ G + + LF +M+ + DV ++Y
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 191 ----SFASVLSVCDAGLLEFGRQLHSLVTKSGF-SCLVSVVNALITMYFNCGNVVDACKV 245
SF + GL + GR++H V +G +V + N L+ MY CG++ DA +V
Sbjct: 313 ILLSSFPEYSLAEEVGLKK-GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
F D +S+N M+ GL G EA+ R++ M + P T +S +S+C
Sbjct: 372 FYFMTDK--DSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLK 429
Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
++G Q+H +++K G + SVSNA +T+Y+ G ++E IF+ + E D VSWN++I
Sbjct: 430 WAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIG 489
Query: 363 TYA--QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGI 417
A +R+L A++ +L Q G + + TF S+L++ F E+ + IH N I
Sbjct: 490 ALARSERSLPE-AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548
Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFS 476
NALI+ Y K + +IF M+ R + +TWN++I+G++ N + L
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVW 608
Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
+L + R D + + LS+ A +++L G ++H ++ L S + +G+A++ +Y+KCG
Sbjct: 609 FMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCG 668
Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
LD +LR FN M +++ SWN++IS YA+HG+G+EA+ F+ M+ G+ PD TF VL
Sbjct: 669 RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVL 728
Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
SACSHAGL+++G + F+SM + YG P +H SCM D+LGRAG LD+ E I ++
Sbjct: 729 SACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPN 788
Query: 657 SDNWWALFSACA-AHG-NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIR 714
W + AC A+G LG+ A +L + E + YVLL N+YAA G WE+ R
Sbjct: 789 VLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKAR 848
Query: 715 ELLKRTGVIKQPGCSWI 731
+ +K V K+ G SW+
Sbjct: 849 KKMKDADVKKEAGYSWV 865
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/479 (30%), Positives = 247/479 (51%), Gaps = 25/479 (5%)
Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
R HS + K+ V + N LI Y G+ V A KVF+E C +S+ ++ G +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC--VSWACIVSGYS 78
Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-----LCPRVGYQVHAQAMKSGFEAY 322
G +EAL+ RDM+ + ++ FVSV+ AC + G Q+H K +
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 323 TSVSNAAITMYSSC-GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
VSN I+MY C G + A F ++ K+ VSWN++IS Y+Q RSA + MQ
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 382 SVGIRPDEFTFGSLLASS-----GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
G RP E+TFGSL+ ++ + ++E I + +G++T++ V + L+SA+AK+
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL-LMSELRPDEYTL---SV 492
+ A ++F+ M RN +T N L+ G + + + + F ++ M ++ P+ Y + S
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
S A L+ G+++HG+V+ L+ M +GN ++ +YAKCG + + RVF M +K
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK 378
Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
D++SWN++I+ Q+G EAV +K+M+ I P T + LS+C+ G +I
Sbjct: 379 DSVSWNSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS--QHIQARSDNWWALFSACA 668
+ G + ++ L GYL+E ++ +S +H Q +W ++ A A
Sbjct: 438 HGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV---SWNSIIGALA 492
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 160/577 (27%), Positives = 289/577 (50%), Gaps = 32/577 (5%)
Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
R++ + DVY ++A + G A +VFD+MP R+ + +++G + NG
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVCD----AGLLEFGRQLHSLVTKSGFSCLVSVVNA 228
+ R+M K + + Y+F SVL C G+L FGRQ+H L+ K ++ V N
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGIL-FGRQIHGLMFKLSYAVDAVVSNV 144
Query: 229 LITMYFNC-GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASL 287
LI+MY+ C G+V A F + + V + +S+N ++ + G A F M
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIE--VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 288 RPSELTFVS-VMSACLCP----RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
RP+E TF S V +AC R+ Q+ KSG V + ++ ++ G + A
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 343 CMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS-VGIRPDEFTFGSLLASSGF 401
+F +++ ++ V+ N ++ ++ G A +++M S + + P+ + LL+S
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPE 320
Query: 402 IEMVE--------MIHAFVFINGIIT-NIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
+ E +H V G++ + + N L++ YAK I A ++F+ M+ ++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
++WN++I G NG ++ ++ + + ++ P +TL +LSSCA + + G+QIHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEG-KE 571
LK + +S+ NA++TLYA+ G L+ ++F+ M E D +SWN++I A A+ E
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCM 631
AV CF Q G+ K ++ TF++VLSA S + G +I + + A + +
Sbjct: 501 AVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE-NAL 558
Query: 632 LDLLGRAGYLDEAERVINSQHIQARSDN--WWALFSA 666
+ G+ G +D E++ + + R DN W ++ S
Sbjct: 559 IACYGKCGEMDGCEKIFS--RMAERRDNVTWNSMISG 593
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 209/477 (43%), Gaps = 52/477 (10%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N + L ++G + +A+ + + H + P ++L ++L++CA+L+ A G Q+H +L
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRR-HDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G+ V+N +++LY L +++FS + D SW + + A +
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR--------- 493
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
+R LP + F + + + +F+SVLS +
Sbjct: 494 -----SERSLPE----------------AVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
E G+Q+H L K+ + + NALI Y CG +D C+ D++++N M+
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGE-MDGCEKIFSRMAERRDNVTWNSMI 591
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFE 320
G + +AL ML R + +V+SA G +VHA ++++ E
Sbjct: 592 SGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLE 651
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
+ V +A + MYS CG++D A F + ++ SWN+MIS YA+ G A+ + M
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Query: 381 QSVG-IRPDEFTFGSLLAS--------SGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
+ G PD TF +L++ GF M ++ G+ I+ + +
Sbjct: 712 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSY----GLAPRIEHFSCMADVL 767
Query: 432 AKNERIKQAYQIFHNMSPR-NIITWNTLINGFL-LNGFPVQGLQHFSELLMSELRPD 486
+ + + M + N++ W T++ NG + + +E+L +L P+
Sbjct: 768 GRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLF-QLEPE 823
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 235/724 (32%), Positives = 380/724 (52%), Gaps = 60/724 (8%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N+ ++ + G A+ F + S +K +L + L+A + N G +HA A+
Sbjct: 296 NVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ GL + +V ++++S+Y S C KM + A +
Sbjct: 355 KLGLASNIYVGSSLVSMY----------------------------SKCEKM---EAAAK 383
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
VF+ + +++ +NAMI G NG + LF +M D+++F S+LS C A
Sbjct: 384 VFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHD 443
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD--HISYNV 261
LE G Q HS++ K + + V NAL+ MY CG + DA ++FE +CD ++++N
Sbjct: 444 LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER----MCDRDNVTWNT 499
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
++ EA F+ M + + S + AC G QVH ++K G
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
+ ++ I MYS CG I +A +F+ L E +VS N +I+ Y+Q NL A++ +
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQ 618
Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSN-------ALISAY 431
EM + G+ P E TF +++ + E + + F +G IT S+ +L+ Y
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQF---HGQITKRGFSSEGEYLGISLLGMY 675
Query: 432 AKNERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
+ + +A +F +S P++I+ W +++G NGF + L+ + E+ + PD+ T
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Query: 491 SVALSSCARISSLRHGKQIHGYV--LKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
L C+ +SSLR G+ IH + L ++L S N +I +YAKCGD+ S +VF+ M
Sbjct: 736 VTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTS--NTLIDMYAKCGDMKGSSQVFDEM 793
Query: 549 IEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
+ + +SWN+LI+ YA++G ++A+ F +M+ I PD+ TF VL+ACSHAG V D
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGKVSD 852
Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
G +IF+ M+ YG DH++CM+DLLGR GYL EA+ I +Q+++ + W +L AC
Sbjct: 853 GRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGAC 912
Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
HG+ G I A L+E E S YVLLSNIYA+ G WE+A +R++++ GV K PG
Sbjct: 913 RIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPG 972
Query: 728 CSWI 731
SWI
Sbjct: 973 YSWI 976
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 171/618 (27%), Positives = 281/618 (45%), Gaps = 79/618 (12%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N L+ S G L FV + +++ P+ ++ S L+ CA N FG Q+H +
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ GL+ + ++ +Y + +RVF I +P+ WT S K G + A
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
VF++M RD E H R D+ +F +V
Sbjct: 248 VFERM--RD-------------------------EGH----RPDHLAFVTV--------- 267
Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMD 264
I Y G + DA +F E D +++NVM+
Sbjct: 268 -------------------------INTYIRLGKLKDARLLFGEMSS--PDVVAWNVMIS 300
Query: 265 GLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEA 321
G G A+ F +M +S++ + T SV+SA +G VHA+A+K G +
Sbjct: 301 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 360
Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
V ++ ++MYS C K++ A +F L+EK+ V WN MI YA + +++M+
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 382 SVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
S G D+FTF SLL A+S +EM H+ + + N+ V NAL+ YAK ++
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
A QIF M R+ +TWNT+I ++ + + F + + + D L+ L +C
Sbjct: 481 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
+ L GKQ+H +K L + G+++I +Y+KCG + + +VF+ + E +S NA
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
LI+ Y+Q+ +EAV F+ M G + P + TF ++ AC + GT+ F +
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRG-VNPSEITFATIVEACHKPESLTLGTQ-FHGQITK 657
Query: 619 YGFIPAEDHLSCMLDLLG 636
GF ++L + LLG
Sbjct: 658 RGFSSEGEYLG--ISLLG 673
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 251/522 (48%), Gaps = 45/522 (8%)
Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
K V YA + FD + ++D+ +N+M++ + G + F + + + + ++F+
Sbjct: 107 KCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI 165
Query: 195 VLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
VLS C +EFGRQ+H + K G AL+ MY C + DA +VFE ++
Sbjct: 166 VLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE----WI 221
Query: 254 CDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVH 311
D + + + G G EEA++ F M RP L FV+V
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV-------------- 267
Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
I Y GK+ +A ++F + D+V+WN MIS + +R
Sbjct: 268 ------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCET 309
Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALI 428
AI + M+ ++ T GS+L++ G + +++ +HA G+ +NI V ++L+
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLV 369
Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
S Y+K E+++ A ++F + +N + WN +I G+ NG + ++ F ++ S D++
Sbjct: 370 SMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDF 429
Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
T + LS+CA L G Q H ++K L + +GNA++ +YAKCG L+ + ++F M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
++D ++WN +I +Y Q EA FK M G I D A + L AC+H + G
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCG-IVSDGACLASTLKACTHVHGLYQG 548
Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINS 650
++ V G S ++D+ + G + +A +V +S
Sbjct: 549 KQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 209/449 (46%), Gaps = 40/449 (8%)
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
L G+ +HS G + NA++ +Y C V A K F+ + D ++N M+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK---DVTAWNSML 132
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFE 320
+S+G+ + L F + + P++ TF V+S C G Q+H +K G E
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
+ A + MY+ C +I +A +F + + + V W + S Y + L A+L + M
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
+ G RPD F + +I+ Y + ++K A
Sbjct: 253 RDEGHRPDHLAFVT--------------------------------VINTYIRLGKLKDA 280
Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
+F MS +++ WN +I+G G +++F + S ++ TL LS+ +
Sbjct: 281 RLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIV 340
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
++L G +H +K L S + +G++++++Y+KC ++ + +VF + EK+ + WNA+I
Sbjct: 341 ANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
YA +GE + + F M+ G D TFT++LS C+ + ++ G++ F S++
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKK 458
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
+ ++D+ + G L++A ++
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFE 487
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 187/455 (41%), Gaps = 82/455 (18%)
Query: 302 LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
L R+G VH++++ G ++ + NA + +Y+ C ++ A F L EKD+ +WN+M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGII 418
S Y+ + +++ + I P++FTF +L++ +E IH + G+
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
N AL+ YAK +RI A ++F + N + W L +G++ G P + + F +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
RPD +++ R+ L+ + +
Sbjct: 253 RDEGHRPDHLAFVTVINTYIRLGKLKDARLL----------------------------- 283
Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
F M D ++WN +IS + + G A+ F M+ +K ++T +VLSA
Sbjct: 284 ------FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK-SSVKSTRSTLGSVLSA 336
Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
+D G + + G S ++ + + ++ A +V + ++ ++D
Sbjct: 337 IGIVANLDLGLVVHAEAIK-LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA--LEEKND 393
Query: 659 NWW------------------------------------ALFSACAAHGNLRLGRIIAGL 682
+W +L S CAA +L +G +
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 683 LLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRE 715
+++++ K +++V L ++YA G E+A I E
Sbjct: 454 IIKKKLAK-NLFVGNALVDMYAKCGALEDARQIFE 487
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 224/660 (33%), Positives = 339/660 (51%), Gaps = 60/660 (9%)
Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVY--NAMITGCTENGYEDIGIGLFREMHKLDVR 186
+S +G + +A + + P D VY N++I +NG + + LF MH L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 187 RDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
DNY+F V C + + G H+L +GF V V NAL+ MY C ++ DA KV
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACL-- 302
F+E V D +S+N +++ A +G+ + AL F M RP +T V+V+ C
Sbjct: 185 FDEMS--VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM- 360
+G Q+H A+ S V N + MY+ CG +DEA +F+ + KD+VSWN M
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 361 ----------------------------------ISTYAQRNLGRSAILAYLEMQSVGIR 386
IS YAQR LG A+ +M S GI+
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 387 PDEFTFGSLL---ASSGFIEMVEMIHAFVFI-------NGIITNIQVSNALISAYAKNER 436
P+E T S+L AS G + + IH + NG V N LI YAK ++
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 437 IKQAYQIFHNMSP--RNIITWNTLINGFLLNGFPVQGLQHFSELLMS--ELRPDEYTLSV 492
+ A +F ++SP R+++TW +I G+ +G + L+ SE+ + RP+ +T+S
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
AL +CA +++LR GKQIH Y L+N + + + N +I +YAKCG + + VF+ M+ K
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAK 542
Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
+ ++W +L++ Y HG G+EA+ F M+ +G K D T VL ACSH+G++D G
Sbjct: 543 NEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 612 FDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHG 671
F+ M +G P +H +C++DLLGRAG L+ A R+I ++ W A S C HG
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 672 NLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+ LG A + E + Y LLSN+YA AG W++ IR L++ GV K+PGCSW+
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 169/630 (26%), Positives = 269/630 (42%), Gaps = 97/630 (15%)
Query: 41 LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
L+LF +HS PD Y+ AC + + G HA +L G + V N +++
Sbjct: 112 LYLFGLMHSL-SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVA 170
Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
+Y R L ++VF E+ DV SW + + + K+G A E+F +M +
Sbjct: 171 MYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE-------- 222
Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGF 219
GC R DN + +VL C + G G+QLH S
Sbjct: 223 -FGC---------------------RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
+ V N L+ MY CG + +A VF V D +S+N M+ G + +GR E+A+ F
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMS--VKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 280 -----------------------------------RDMLVASLRPSELTFVSVMSACLCP 304
R ML + ++P+E+T +SV+S C
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASV 378
Query: 305 RV---GYQVHAQAM-------KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARL--QEK 352
G ++H A+ K+G V N I MY+ C K+D A +F L +E+
Sbjct: 379 GALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEM--QSVGIRPDEFTFGSLL---ASSGFIEMVEM 407
D+V+W MI Y+Q A+ EM + RP+ FT L AS + + +
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 408 IHAFVFINGI-ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
IHA+ N + VSN LI YAK I A +F NM +N +TW +L+ G+ ++G
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
+ + L F E+ + D TL V L +C+ + G + Y + + +S G
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVFGVSPGP 615
Query: 527 ----AMITLYAKCGDLDCSLRVF-NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
++ L + G L+ +LR+ M +E + W A +S H GK + + A +
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIH--GKVELGEYAAEKI 673
Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
++T + + ++AG D TRI
Sbjct: 674 TELASNHDGSYTLLSNLYANAGRWKDVTRI 703
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 209/449 (46%), Gaps = 22/449 (4%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
++ N + + ++ G + AL +F ++ + +PD +L L CA+L + G QLH
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
+A+ + + V N ++ +Y + VFS + DV SW ++ +++G +
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
A +F+KM + D+ ++A I+G + G +G+ R+M ++ + + SVL
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 197 SVC-DAGLLEFGRQLHSL-------VTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEE 248
S C G L G+++H + K+G V+N LI MY C V A +F+
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 249 AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV--ASLRPSELTFVSVMSAC---LC 303
D +++ VM+ G + G +AL +M RP+ T + AC
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 304 PRVGYQVHAQAMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
R+G Q+HA A+++ A VSN I MY+ CG I +A ++F + K+ V+W ++++
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMT 552
Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM-VEMIHAFVFINGII 418
Y G A+ + EM+ +G + D T +L + SG I+ +E + + G+
Sbjct: 553 GYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVS 612
Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNM 447
+ L+ + R+ A ++ M
Sbjct: 613 PGPEHYACLVDLLGRAGRLNAALRLIEEM 641
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 157/334 (47%), Gaps = 26/334 (7%)
Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRN--IITWNTLI 459
I V++IH + GI+T + +++ LIS Y + A + P + + WN+LI
Sbjct: 41 ISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 460 NGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI 519
+ NG + L F + PD YT +C ISS+R G+ H L I
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAM 579
S + +GNA++ +Y++C L + +VF+ M D +SWN++I +YA+ G+ K A+ F M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTR-----IFDSMVNDYGFIPAEDHLSCMLDL 634
+ +PD T VL C+ G G + + M+ + F+ +C++D+
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM-FVG-----NCLVDM 273
Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL----EREQDK 690
+ G +DEA V ++ ++ +W A+ + G ++GR + L + E+ K
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVV-SWNAMVA-----GYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 691 PSVYVLLSNI--YAAAGLWEEAANIRELLKRTGV 722
V + I YA GL EA + + +G+
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 358 bits (919), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 218/714 (30%), Positives = 361/714 (50%), Gaps = 41/714 (5%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N +++ R+G AL + ++ + PD+ + + AC L+N
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLC-FGVSPDVSTFPCLVKACVALKN------------ 153
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
K +++T+ SL + + V+ ++ + A + G +D +
Sbjct: 154 ---FKGIDFLSDTVSSLGMDCNEFVA----------------SSLIKAYLEYGKIDVPSK 194
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
+FD++ +D ++N M+ G + G D I F M + + +F VLSVC + LL
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
+ G QLH LV SG S+ N+L++MY CG DA K+F D +++N M+
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR--ADTVTWNCMI 312
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVM-SACLCPRVGY--QVHAQAMKSGFE 320
G G +EE+L F +M+ + + P +TF S++ S + Y Q+H M+
Sbjct: 313 SGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSIS 372
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
+++A I Y C + A IF++ D+V + MIS Y L ++ + +
Sbjct: 373 LDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWL 432
Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERI 437
V I P+E T S+L G + +++ +H F+ G + A+I YAK R+
Sbjct: 433 VKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRM 492
Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
AY+IF +S R+I++WN++I + P + F ++ +S + D ++S ALS+C
Sbjct: 493 NLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC 552
Query: 498 ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWN 557
A + S GK IHG+++K++L S + + +I +YAKCG+L ++ VF M EK+ +SWN
Sbjct: 553 ANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 558 ALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN 617
++I+A HG+ K+++ F M + I+PDQ TF ++S+C H G VD+G R F SM
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 618 DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGR 677
DYG P ++H +C++DL GRAG L EA + S + W L AC H N+ L
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 678 IIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+ + L++ + YVL+SN +A A WE +R L+K V K PG SWI
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 166/320 (51%), Gaps = 11/320 (3%)
Query: 289 PSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
P L+ + + AC P R G QVHA + + + + MY+ CG + +
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 346 FARL--QEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE 403
F RL + I WN++IS++ + L A+ Y +M G+ PD TF L+ + ++
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALK 152
Query: 404 M---VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
++ + V G+ N V+++LI AY + +I ++F + ++ + WN ++N
Sbjct: 153 NFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLN 212
Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
G+ G ++ FS + M ++ P+ T LS CA + G Q+HG V+ + +
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
+ S+ N+++++Y+KCG D + ++F MM DT++WN +IS Y Q G +E+++ F M
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 581 DVGRIKPDQATFTAVLSACS 600
G + PD TF+++L + S
Sbjct: 333 SSG-VLPDAITFSSLLPSVS 351
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 215/619 (34%), Positives = 319/619 (51%), Gaps = 76/619 (12%)
Query: 188 DNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
D+ FA +L C L + R +H+ V KSGFS + + N LI Y CG++ D +V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 246 FEEAK-----------------GYVC------------DHISYNVMMDGLASVGRVEEAL 276
F++ G++ D ++N M+ G A R EEAL
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 277 IRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMY 333
F M +E +F SV+SAC G QVH+ KS F + + +A + MY
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 334 SSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFG 393
S CG +++A +F + ++++VSWN++I+ + Q A+ + M + PDE T
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITN-IQVSNALISAYAKNERIKQAYQIFHN--- 446
S++ AS I++ + +H V N + N I +SNA + YAK RIK+A IF +
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Query: 447 ----------------------------MSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
M+ RN+++WN LI G+ NG + L F L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI------SKMSLGNAMITLY 532
+ P Y+ + L +CA ++ L G Q H +VLK+ + +GN++I +Y
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 533 AKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATF 592
KCG ++ VF M+E+D +SWNA+I +AQ+G G EA+ F+ M + G KPD T
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITM 496
Query: 593 TAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQH 652
VLSAC HAG V++G F SM D+G P DH +CM+DLLGRAG+L+EA+ +I
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 653 IQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAAN 712
+Q S W +L +AC H N+ LG+ +A LLE E YVLLSN+YA G WE+ N
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 713 IRELLKRTGVIKQPGCSWI 731
+R+ +++ GV KQPGCSWI
Sbjct: 617 VRKSMRKEGVTKQPGCSWI 635
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 158/570 (27%), Positives = 280/570 (49%), Gaps = 58/570 (10%)
Query: 52 KLKPDIYSLSTT------LAACANLR-NAAFGNQLHAYALRAGLKAYPHVANTILSLYKN 104
KL D+ S + + L +C + +A + +HA +++G + N ++ Y
Sbjct: 8 KLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSK 67
Query: 105 ARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGC 164
L ++VF ++ ++Y+W + ++ TK+G +D A +F MP+RD +N+M++G
Sbjct: 68 CGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGF 127
Query: 165 TENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCL 222
++ + + F MHK + YSFASVLS C +GL + G Q+HSL+ KS F
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSAC-SGLNDMNKGVQVHSLIAKSPFLSD 186
Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM 282
V + +AL+ MY CGNV DA +VF+E + +S+N ++ G EAL F+ M
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDR--NVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 283 LVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG-FEAYTSVSNAAITMYSSCGK 338
L + + P E+T SV+SAC +VG +VH + +K+ +SNA + MY+ C +
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 339 IDEACMI-------------------------------FARLQEKDIVSWNTMISTYAQR 367
I EA I F ++ E+++VSWN +I+ Y Q
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 368 NLGRSAILAYLEMQSVGIRPDEFTFGSLLASS--------GFIEMVEMI-HAFVFINGII 418
A+ + ++ + P ++F ++L + G V ++ H F F +G
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 419 TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSEL 478
+I V N+LI Y K +++ Y +F M R+ ++WN +I GF NG+ + L+ F E+
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM-SLGNAMITLYAKCGD 537
L S +PD T+ LS+C + G+ + ++ ++ + M+ L + G
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 538 LDCSLRVFNMM-IEKDTISWNALISAYAQH 566
L+ + + M ++ D++ W +L++A H
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 185/422 (43%), Gaps = 72/422 (17%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N ++ ++ ++AL F +H + + YS ++ L+AC+ L + G Q+H+
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNE-YSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
++ + ++ + ++ +Y ++ +RVF E+ + +V SW
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSW------------------ 221
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
N++IT +NG + +F+ M + V D + ASV+S C +
Sbjct: 222 -------------NSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 204 LEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEEAK------------ 250
++ G+++H V K+ + + NA + MY C + +A +F+
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 251 GYVC-----------------DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELT 293
GY + +S+N ++ G G EEAL F + S+ P+ +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 294 FVSVMSACLC---PRVGYQVHAQAMKSGFEAYTS------VSNAAITMYSSCGKIDEACM 344
F +++ AC +G Q H +K GF+ + V N+ I MY CG ++E +
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
+F ++ E+D VSWN MI +AQ G A+ + EM G +PD T +L++ G
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGF 508
Query: 405 VE 406
VE
Sbjct: 509 VE 510
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 180/381 (47%), Gaps = 35/381 (9%)
Query: 31 LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG-LK 89
++G +AL +F Q+ +++PD +L++ ++ACA+L G ++H ++ L+
Sbjct: 228 FEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 90 AYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM 149
++N + +Y + + +F + +V + T+ +S A +F KM
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 150 PDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGR 208
+R++ +NA+I G T+NG + + LF + + V +YSFA++L C D L G
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 209 QLHSLVTKSGFSCL------VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
Q H V K GF + V N+LI MY CG V + VF + C +S+N M
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC--VSWNAM 464
Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
+ G A G EAL FR+ML + +P +T + V+SAC HA ++ G +
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC--------GHAGFVEEGRHYF 516
Query: 323 TSVSN----AAITMYSSC--------GKIDEA-CMIFARLQEKDIVSWNTMIST-YAQRN 368
+S++ A + + +C G ++EA MI + D V W ++++ RN
Sbjct: 517 SSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRN 576
Query: 369 --LGRSAILAYLEMQSVGIRP 387
LG+ LE++ P
Sbjct: 577 ITLGKYVAEKLLEVEPSNSGP 597
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 72/342 (21%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
++ N +A +++G ++AL LF + + P YS + L ACA+L G Q H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLL-KRESVCPTHYSFANILKACADLAELHLGMQAH 409
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
+ L+ G K F + D++ + + K G V+
Sbjct: 410 VHVLKHGFK-------------------------FQSGEEDDIFVGNSLIDMYVKCGCVE 444
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
VF KM +RD +NAMI G +NGY + + LFREM + + D+ + VLS C
Sbjct: 445 EGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACG 504
Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
AG +E GR S +T+ F + D Y
Sbjct: 505 HAGFVEEGRHYFSSMTRD----------------FGVAPLRD----------------HY 532
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMK 316
M+D L G +EEA +M ++P + + S+++AC R +G V + ++
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEM---PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 317 ---SGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIV 355
S Y +SN MY+ GK ++ + ++++ +
Sbjct: 590 VEPSNSGPYVLLSN----MYAELGKWEDVMNVRKSMRKEGVT 627
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 223/708 (31%), Positives = 377/708 (53%), Gaps = 43/708 (6%)
Query: 31 LSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
S++G + +AL + ++ S K+ PD Y+ + + ACA L +A G+ ++ L G ++
Sbjct: 81 FSKNGLFPEALEFYGKLRES-KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 91 YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP 150
V N ++ +Y ++MG + A +VFD+MP
Sbjct: 140 DLFVGNALVDMY-------------------------------SRMGLLTRARQVFDEMP 168
Query: 151 DRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAGLLEFGRQ 209
RDL +N++I+G + +GY + + ++ E+ + D+++ +SVL + + +++ G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
LH KSG + +V V N L+ MY DA +VF+E V D +SYN M+ G +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMD--VRDSVSYNTMICGYLKL 286
Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVS 326
VEE++ F + L +P LT SV+ AC R + ++ +K+GF ++V
Sbjct: 287 EMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
N I +Y+ CG + A +F ++ KD VSWN++IS Y Q A+ + M + +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 387 PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
D T+ L++ S + ++ +H+ +GI ++ VSNALI YAK + + +I
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
F +M + +TWNT+I+ + G GLQ +++ SE+ PD T V L CA +++
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 504 RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAY 563
R GK+IH +L+ S++ +GNA+I +Y+KCG L+ S RVF M +D ++W +I AY
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Query: 564 AQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIP 623
+GEG++A+ F M+ G I PD F A++ ACSH+GLVD+G F+ M Y P
Sbjct: 586 GMYGEGEKALETFADMEKSG-IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
Query: 624 AEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLL 683
+H +C++DLL R+ + +AE I + I+ + W ++ AC G++ ++ +
Sbjct: 645 MIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRI 704
Query: 684 LEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+E D P +L SN YAA W++ + IR+ LK + K PG SWI
Sbjct: 705 IELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWI 752
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 169/673 (25%), Positives = 316/673 (46%), Gaps = 59/673 (8%)
Query: 60 LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
+S L++ +NL ++HA + GL + + ++ Y + R+ S VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
P +++ ++N++I ++NG + + +
Sbjct: 67 ------------------------------PAKNVYLWNSIIRAFSKNGLFPEALEFYGK 96
Query: 180 MHKLDVRRDNYSFASVLSVCDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
+ + V D Y+F SV+ C AGL E G ++ + GF + V NAL+ MY G
Sbjct: 97 LRESKVSPDKYTFPSVIKAC-AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMG 155
Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
+ A +VF+E V D +S+N ++ G +S G EEAL + ++ + + P T SV
Sbjct: 156 LLTRARQVFDEMP--VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSV 213
Query: 298 MSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
+ A L + G +H A+KSG + V+N + MY + +A +F + +D
Sbjct: 214 LPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDS 273
Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMIHAF 411
VS+NTMI Y + + ++ +LE +PD T S+L + G + + + I+ +
Sbjct: 274 VSYNTMICGYLKLEMVEESVRMFLENLD-QFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
+ G + V N LI YAK + A +F++M ++ ++WN++I+G++ +G ++
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEA 392
Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITL 531
++ F +++ E + D T + +S R++ L+ GK +H +K+ + +S+ NA+I +
Sbjct: 393 MKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDM 452
Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
YAKCG++ SL++F+ M DT++WN +ISA + G+ + M+ + PD AT
Sbjct: 453 YAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK-SEVVPDMAT 511
Query: 592 FTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQ 651
F L C+ G I ++ +G+ + ++++ + G L+ + RV
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFER- 569
Query: 652 HIQARSD--NWWALFSACAAHGNLRLGRIIAGLLLEREQDK--PSVYVLLSNIYAA--AG 705
+R D W + A +G G + E+ P V ++ IYA +G
Sbjct: 570 --MSRRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 706 LWEEAANIRELLK 718
L +E E +K
Sbjct: 625 LVDEGLACFEKMK 637
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/599 (24%), Positives = 273/599 (45%), Gaps = 78/599 (13%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L+ N ++ S G+Y++AL ++ ++ +S + PD +++S+ L A NL G LH
Sbjct: 172 LVSWNSLISGYSSHGYYEEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
+AL++G+ + V N ++++Y R +RVF E+ D S+ T + K+ V+
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
+ +F + D+ P D + +SVL C
Sbjct: 291 ESVRMFLENLDQFKP--------------------------------DLLTVSSVLRACG 318
Query: 201 -AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHIS 258
L + +++ + K+GF +V N LI +Y CG+++ A VF + C D +S
Sbjct: 319 HLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME---CKDTVS 375
Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTF---VSVMSACLCPRVGYQVHAQAM 315
+N ++ G G + EA+ F+ M++ + +T+ +SV + + G +H+ +
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
KSG SVSNA I MY+ CG++ ++ IF+ + D V+WNT+IS + + +
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
+M+ + PD TF L AS + + IH + G + +Q+ NALI Y+
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYS 555
Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
K ++ + ++F MS R+++TW +I + + G + L+ F+++ S + PD
Sbjct: 556 KCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIA 615
Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
+ +C+ + G ++ M T Y + MIE
Sbjct: 616 IIYACSHSGLVDEG---------------LACFEKMKTHYK-----------IDPMIEH- 648
Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
+ ++ ++ + +A +AM IKPD + + +VL AC +G ++ R+
Sbjct: 649 ---YACVVDLLSRSQKISKAEEFIQAMP----IKPDASIWASVLRACRTSGDMETAERV 700
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 217/734 (29%), Positives = 359/734 (48%), Gaps = 62/734 (8%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N L+ ++G ++ +FV + ++ D + + L C+ L + + G Q+H +
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
R G A+ +L +Y + V RVF I + SW+
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS----------------- 250
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
A+I GC +N + + F+EM K++ +ASVL C A
Sbjct: 251 --------------AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
L G QLH+ KS F+ V A + MY C N+ DA +F+ ++ + SYN M+
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL--NRQSYNAMI 354
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
G + +AL+ F ++ + L E++ V AC + G Q++ A+KS
Sbjct: 355 TGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
V+NAAI MY C + EA +F ++ +D VSWN +I+ + Q G + ++ M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 381 QSVGIRPDEFTFGSLLA--SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
I PDEFTFGS+L + G + IH+ + +G+ +N V +LI Y+K I+
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 439 QAYQI-------------------FHNMSPRNI-ITWNTLINGFLLNGFPVQGLQHFSEL 478
+A +I HN + + ++WN++I+G+++ F+ +
Sbjct: 535 EAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
+ + PD++T + L +CA ++S GKQIH V+K L S + + + ++ +Y+KCGDL
Sbjct: 595 MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDL 654
Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
S +F + +D ++WNA+I YA HG+G+EA+ F+ M + IKP+ TF ++L A
Sbjct: 655 HDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRA 713
Query: 599 CSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSD 658
C+H GL+D G F M DYG P H S M+D+LG++G + A +I +A
Sbjct: 714 CAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV 773
Query: 659 NWWALFSACAAH-GNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELL 717
W L C H N+ + LL + S Y LLSN+YA AG+WE+ +++R +
Sbjct: 774 IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Query: 718 KRTGVIKQPGCSWI 731
+ + K+PGCSW+
Sbjct: 834 RGFKLKKEPGCSWV 847
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/703 (26%), Positives = 340/703 (48%), Gaps = 53/703 (7%)
Query: 57 IYSLSTT-----LAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
+ S+STT CA G Q HA+ + +G + V N +L +Y N+RD VS
Sbjct: 43 VNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA 102
Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
VF ++ DV SW ++ +K + A F+ MP RD+ +N+M++G +NG
Sbjct: 103 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 162
Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE---FGRQLHSLVTKSGFSCLVSVVNA 228
I +F +M + + D +FA +L VC LE G Q+H +V + G V +A
Sbjct: 163 KSIEVFVDMGREGIEFDGRTFAIILKVC--SFLEDTSLGMQIHGIVVRVGCDTDVVAASA 220
Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
L+ MY V++ +VF+ + +S++ ++ G + AL F++M +
Sbjct: 221 LLDMYAKGKRFVESLRVFQGIPEK--NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
Query: 289 PSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
S+ + SV+ +C R+G Q+HA A+KS F A V A + MY+ C + +A ++
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV 405
F + + S+N MI+ Y+Q G A+L + + S G+ DE + + + ++ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 406 E---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF 462
I+ + + ++ V+NA I Y K + + +A+++F M R+ ++WN +I
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 463 LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKM 522
NG + L F +L S + PDE+T L +C SL +G +IH ++K+ + S
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNS 517
Query: 523 SLGNAMITLYAKCGDLDCSLRV--------------------FNMMIEKDTISWNALISA 562
S+G ++I +Y+KCG ++ + ++ N +++ +SWN++IS
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 563 YAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFI 622
Y + ++A F M ++G I PD+ T+ VL C++ G +I ++ +
Sbjct: 578 YVMKEQSEDAQMLFTRMMEMG-ITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE--L 634
Query: 623 PAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
++ ++ S ++D+ + G L ++ R++ + ++ W A+ A HG A
Sbjct: 635 QSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEE----AI 689
Query: 682 LLLER---EQDKPSVYVLLSNIYAAA--GLWEEAANIRELLKR 719
L ER E KP+ +S + A A GL ++ ++KR
Sbjct: 690 QLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKR 732
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 8/181 (4%)
Query: 18 KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
+E+ + N ++ +DA LF ++ + PD ++ +T L CANL +A G
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMME-MGITPDKFTYATVLDTCANLASAGLGK 623
Query: 78 QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
Q+HA ++ L++ ++ +T++ +Y DL + +F + D +W + G
Sbjct: 624 QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHG 683
Query: 138 HVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNY 190
+ A ++F++M ++ + +++ C G D G+ F M + LD + +Y
Sbjct: 684 KGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Query: 191 S 191
S
Sbjct: 744 S 744
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 40/242 (16%)
Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
V +F++ L S CA+ +L GKQ H +++ + + N +
Sbjct: 30 VPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCL 89
Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ-------- 580
+ +Y D + VF+ M +D +SWN +I+ Y++ + +A S F M
Sbjct: 90 LQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWN 149
Query: 581 --------------------DVGR--IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVN- 617
D+GR I+ D TF +L CS G +I +V
Sbjct: 150 SMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV 209
Query: 618 --DYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHI-QARSDNWWALFSACAAHGNLR 674
D + A S +LD+ + E+ RV Q I + S +W A+ + C + L
Sbjct: 210 GCDTDVVAA----SALLDMYAKGKRFVESLRVF--QGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 675 LG 676
L
Sbjct: 264 LA 265
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 353 bits (906), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 218/612 (35%), Positives = 332/612 (54%), Gaps = 16/612 (2%)
Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD-VRR 187
FL+ + G++ A VF KM +R+L +N ++ G + GY D + L+ M + V+
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 188 DNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKV 245
D Y+F VL C G+ L G+++H V + G+ + VVNALITMY CG+V A +
Sbjct: 195 DVYTFPCVLRTC-GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 246 FEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC-- 303
F+ D IS+N M+ G G E L F M S+ P +T SV+SAC
Sbjct: 254 FDRMPRR--DIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 304 -PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMIS 362
R+G +HA + +GF SV N+ MY + G EA +F+R++ KDIVSW TMIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 363 TYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIIT 419
Y L AI Y M ++PDE T ++L A+ G ++ +H +I+
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLIS 431
Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
+ V+N LI+ Y+K + I +A IFHN+ +N+I+W ++I G LN + L ++
Sbjct: 432 YVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK 491
Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
M+ L+P+ TL+ AL++CARI +L GK+IH +VL+ + L NA++ +Y +CG ++
Sbjct: 492 MT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMN 550
Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
+ FN +KD SWN L++ Y++ G+G V F M R++PD+ TF ++L C
Sbjct: 551 TAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVK-SRVRPDEITFISLLCGC 608
Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
S + +V G F M DYG P H +C++DLLGRAG L EA + I +
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
W AL +AC H + LG + A + E ++ Y+LL N+YA G W E A +R ++K
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 720 TGVIKQPGCSWI 731
G+ GCSW+
Sbjct: 728 NGLTVDAGCSWV 739
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 261/522 (50%), Gaps = 23/522 (4%)
Query: 163 GCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVTKSGFSC 221
G NG + + L M +L V D F +++ +C+ E G +++S+ S S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 222 LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRD 281
V + NA + M+ GN+VDA VF K + S+NV++ G A G +EA+ +
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVF--GKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 282 ML-VASLRPSELTFVSVMSACL-CPRV--GYQVHAQAMKSGFEAYTSVSNAAITMYSSCG 337
ML V ++P TF V+ C P + G +VH ++ G+E V NA ITMY CG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 338 KIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLA 397
+ A ++F R+ +DI+SWN MIS Y + + + + M+ + + PD T S+++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 398 SSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
+ + + IHA+V G +I V N+L Y ++A ++F M ++I++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
W T+I+G+ N P + + + + ++PDE T++ LS+CA + L G ++H +
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAI 425
Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
K LIS + + N +I +Y+KC +D +L +F+ + K+ ISW ++I+ + EA+
Sbjct: 426 KARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALI 485
Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI----FDSMVNDYGFIPAEDHLSC 630
+ M+ ++P+ T TA L+AC+ G + G I + V F+P +
Sbjct: 486 FLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP-----NA 538
Query: 631 MLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
+LD+ R G ++ A NSQ S W L + + G
Sbjct: 539 LLDMYVRCGRMNTAWSQFNSQKKDVTS--WNILLTGYSERGQ 578
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 262/558 (46%), Gaps = 43/558 (7%)
Query: 17 SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
S+ L N+ + ++ G++ +A+ L+ ++ +KPD+Y+ L C + + A G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 77 NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
++H + +R G + V N ++++Y D+ S + +F + D+ SW
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW---------- 265
Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
NAMI+G ENG G+ LF M L V D + SV+
Sbjct: 266 ---------------------NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 197 SVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
S C+ G GR +H+ V +GF+ +SV N+L MY N G+ +A K+F + D
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK--D 362
Query: 256 HISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHA 312
+S+ M+ G ++A+ +R M S++P E+T +V+SAC G ++H
Sbjct: 363 IVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHK 422
Query: 313 QAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRS 372
A+K+ +Y V+N I MYS C ID+A IF + K+++SW ++I+ N
Sbjct: 423 LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFE 482
Query: 373 AILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALIS 429
A++ +L + ++P+ T + LA+ G + + IHA V G+ + + NAL+
Sbjct: 483 ALI-FLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLD 541
Query: 430 AYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYT 489
Y + R+ A+ F N +++ +WN L+ G+ G ++ F ++ S +RPDE T
Sbjct: 542 MYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEIT 600
Query: 490 LSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM- 548
L C++ +R G + + + ++ L + G+L + + M
Sbjct: 601 FISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP 660
Query: 549 IEKDTISWNALISAYAQH 566
+ D W AL++A H
Sbjct: 661 VTPDPAVWGALLNACRIH 678
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 352 bits (903), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 207/688 (30%), Positives = 361/688 (52%), Gaps = 20/688 (2%)
Query: 61 STTLAACANLRNAAFGN-----QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVF 115
S TLA LR + ++ A ++ G +N I+ + + ++V+
Sbjct: 12 SRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVY 71
Query: 116 SEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIG 175
E+ + + S T +S K G V A ++FD MPDR + + ++ N + D
Sbjct: 72 DEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFK 131
Query: 176 LFREMHKLD--VRRDNYSFASVLSVCDAGLLEFG-RQLHSLVTKSGFSC--LVSVVNALI 230
LFR+M + D+ +F ++L C+ + + Q+H+ K GF ++V N L+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 231 TMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
Y + AC +FEE D +++N ++ G G E++ F M + +PS
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEK--DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 291 ELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
+ TF V+ A + +G Q+HA ++ +GF SV N + YS ++ E M+F
Sbjct: 250 DFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD 309
Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEM 404
+ E D VS+N +IS+Y+Q + +++ + EMQ +G F F ++L A+ ++M
Sbjct: 310 EMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
+H + + + V N+L+ YAK E ++A IF ++ R ++W LI+G++
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
G GL+ F+++ S LR D+ T + L + A +SL GKQ+H +++++ + +
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 525 GNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGR 584
G+ ++ +YAKCG + +++VF M +++ +SWNALISA+A +G+G+ A+ F M + G
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG- 548
Query: 585 IKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
++PD + VL+ACSH G V+ GT F +M YG P + H +CMLDLLGR G EA
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 645 ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDK-PSVYVLLSNIYAA 703
E++++ + W ++ +AC H N L A L E+ + + YV +SNIYAA
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
AG WE+ ++++ ++ G+ K P SW+
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Score = 209 bits (531), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 268/554 (48%), Gaps = 59/554 (10%)
Query: 32 SRSGHYQDALHLFVQI-HSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKA 90
+R+ H+ +A LF Q+ SS PD + +T L C + Q+HA+A++ G
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDT 180
Query: 91 YPH--VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDK 148
P V+N +L Y R L D AC +F++
Sbjct: 181 NPFLTVSNVLLKSYCEVRRL-------------------------------DLACVLFEE 209
Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF-- 206
+P++D +N +ITG ++G I LF +M + + +++F+ VL GL +F
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV-VGLHDFAL 268
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
G+QLH+L +GFS SV N ++ Y V++ +F+E D +SYNV++
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPEL--DFVSYNVVISSY 326
Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMS--ACLCP-RVGYQVHAQAMKSGFEAYT 323
+ + E +L FR+M F +++S A L ++G Q+H QA+ + ++
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
V N+ + MY+ C +EA +IF L ++ VSW +IS Y Q+ L + + + +M+
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 384 GIRPDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERIKQA 440
+R D+ TF ++L AS+ F ++ + +HAF+ +G + N+ + L+ YAK IK A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 441 YQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI 500
Q+F M RN ++WN LI+ NG + F++++ S L+PD ++ L++C+
Sbjct: 507 VQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHC 566
Query: 501 SSLRHGKQ-------IHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKD 552
+ G + I+G K + M+ L + G + ++ + M E D
Sbjct: 567 GFVEQGTEYFQAMSPIYGITPKKKHYA------CMLDLLGRNGRFAEAEKLMDEMPFEPD 620
Query: 553 TISWNALISAYAQH 566
I W+++++A H
Sbjct: 621 EIMWSSVLNACRIH 634
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 201/450 (44%), Gaps = 45/450 (10%)
Query: 22 LKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHA 81
+ N + + G Y +++HLF+++ S +P ++ S L A L + A G QLHA
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 82 YALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDY 141
++ G V N IL Y ++ + +F
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLF-------------------------- 308
Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CD 200
D+MP+ D YN +I+ ++ + + FREM + R N+ FA++LS+ +
Sbjct: 309 -----DEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN 363
Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
L+ GRQLH + ++ V N+L+ MY C +A +F+ +S+
Sbjct: 364 LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT--VSWT 421
Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKS 317
++ G G L F M ++LR + TF +V+ A +G Q+HA ++S
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481
Query: 318 GFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAY 377
G + + MY+ CG I +A +F + +++ VSWN +IS +A G +AI A+
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 378 LEMQSVGIRPDEFT-FGSLLASS--GFIEM-VEMIHAFVFINGIITNIQVSNALISAYAK 433
+M G++PD + G L A S GF+E E A I GI + ++ +
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 434 NERIKQAYQIFHNM--SPRNIITWNTLING 461
N R +A ++ M P I+ W++++N
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIM-WSSVLNA 630
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 214/694 (30%), Positives = 364/694 (52%), Gaps = 48/694 (6%)
Query: 53 LKP-DIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
++P D + S+ L +C R+ G +HA + ++ + N+++SLY + D
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
+ VF E + RD+ ++AM+ NG E
Sbjct: 117 EDVF----------------------------ETMRRFGKRDVVSWSAMMACYGNNGREL 148
Query: 172 IGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSG-FSCLVSVVNAL 229
I +F E +L + ++Y + +V+ C ++ + GR + K+G F V V +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 230 ITMYFNCGNVVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
I M+ N + A KVF++ + +++ +M+ +G EA+ F DM+++
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSEL--NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFE 266
Query: 289 PSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSC---GKIDEA 342
+ T SV SAC +G Q+H+ A++SG V + + MY+ C G +D+
Sbjct: 267 SDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDC 324
Query: 343 CMIFARLQEKDIVSWNTMISTYAQR-NLGRSAILAYLEMQSVG-IRPDEFTFGSLLASSG 400
+F R+++ ++SW +I+ Y + NL AI + EM + G + P+ FTF S + G
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 401 FI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNT 457
+ + + + F G+ +N V+N++IS + K++R++ A + F ++S +N++++NT
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 458 LINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNN 517
++G N Q + SE+ EL +T + LS A + S+R G+QIH V+K
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 518 LISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFK 577
L + NA+I++Y+KCG +D + RVFN M ++ ISW ++I+ +A+HG + F
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 578 AMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGR 637
M + G +KP++ T+ A+LSACSH GLV +G R F+SM D+ P +H +CM+DLL R
Sbjct: 565 QMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCR 623
Query: 638 AGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLL 697
AG L +A IN+ QA W AC H N LG++ A +LE + ++P+ Y+ L
Sbjct: 624 AGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQL 683
Query: 698 SNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
SNIYA AG WEE+ +R +K ++K+ GCSWI
Sbjct: 684 SNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 219/473 (46%), Gaps = 46/473 (9%)
Query: 35 GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
G ++A+ F+ + S + D ++LS+ +ACA L N + G QLH++A+R+GL V
Sbjct: 248 GFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDV 304
Query: 95 ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDL 154
+++ +Y + C+ G VD +VFD+M D +
Sbjct: 305 ECSLVDMY----------------------------AKCSADGSVDDCRKVFDRMEDHSV 336
Query: 155 PVYNAMITGCTEN-GYEDIGIGLFREM-HKLDVRRDNYSFASVLSVC-DAGLLEFGRQLH 211
+ A+ITG +N I LF EM + V ++++F+S C + G+Q+
Sbjct: 337 MSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
K G + SV N++I+M+ + DA + FE + +SYN +DG
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK--NLVSYNTFLDGTCRNLN 454
Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNA 328
E+A ++ L S TF S++S R G Q+H+Q +K G V NA
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
I+MYS CG ID A +F ++ ++++SW +MI+ +A+ + + +M G++P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 389 EFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
E T+ ++L++ + +V ++ + I ++ ++ + + A++
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 445 HNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
+ M + +++ W T + ++ G ++L EL P+E + LS+
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKIL--ELDPNEPAAYIQLSN 685
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 347 bits (891), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/587 (33%), Positives = 325/587 (55%), Gaps = 10/587 (1%)
Query: 142 ACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCD 200
A ++FD+M D ++N MI G T G + + M V+ D +++ V+ SV
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 201 AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYN 260
LE G+++H++V K GF V V N+LI++Y G DA KVFEE D +S+N
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER--DIVSWN 200
Query: 261 VMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKS 317
M+ G ++G +L+ F++ML +P + +S + AC P++G ++H A++S
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRS 260
Query: 318 GFE-AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILA 376
E V + + MYS G++ A IF + +++IV+WN MI YA+ A L
Sbjct: 261 RIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLC 320
Query: 377 YLEM-QSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
+ +M + G++PD T +LL +S +E IH + G + ++ + ALI Y +
Sbjct: 321 FQKMSEQNGLQPDVITSINLLPASAILEG-RTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
++K A IF M+ +N+I+WN++I ++ NG L+ F EL S L PD T++ L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 496 SCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS 555
+ A SL G++IH Y++K+ S + N+++ +YA CGDL+ + + FN ++ KD +S
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
WN++I AYA HG G+ +V F M R+ P+++TF ++L+ACS +G+VD+G F+SM
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESM 558
Query: 616 VNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRL 675
+YG P +H CMLDL+GR G A+R + + W +L +A H ++ +
Sbjct: 559 KREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITI 618
Query: 676 GRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
A + + E D YVLL N+YA AG WE+ I+ L++ G+
Sbjct: 619 AEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGI 665
Score = 179 bits (453), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 145/596 (24%), Positives = 283/596 (47%), Gaps = 47/596 (7%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N+ + + G Y +A+ + ++ + +K D ++ + + A + + G ++HA +
Sbjct: 99 NVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVI 157
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G + +V N+++SLY K+G A +
Sbjct: 158 KLGFVSDVYVCNSLISLY-------------------------------MKLGCAWDAEK 186
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGL 203
VF++MP+RD+ +N+MI+G G + LF+EM K + D +S S L C
Sbjct: 187 VFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYS 246
Query: 204 LEFGRQLHSLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNV 261
+ G+++H +S V V+ +++ MY G V A ++F G + +I ++NV
Sbjct: 247 PKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF---NGMIQRNIVAWNV 303
Query: 262 MMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFE 320
M+ A GRV +A + F+ M + L+P +T ++++ A G +H AM+ GF
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE-GRTIHGYAMRRGFL 362
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
+ + A I MY CG++ A +IF R+ EK+++SWN++I+ Y Q SA+ + E+
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 381 QSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERI 437
+ PD T S+L A S + IHA++ + +N + N+L+ YA +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDL 482
Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
+ A + F+++ +++++WN++I + ++GF + FSE++ S + P++ T + L++C
Sbjct: 483 EDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAAC 542
Query: 498 ARISSLRHGKQIHGYVLKNNLISK-MSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS- 555
+ + G + + + I + M+ L + G+ + R M T
Sbjct: 543 SISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARI 602
Query: 556 WNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
W +L++A H + ++ F A Q + + +L+ + AG +D RI
Sbjct: 603 WGSLLNASRNHKD--ITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRI 656
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 7/256 (2%)
Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
+ +A + ++ A Q+F M+ + WN +I GF G ++ +Q +S ++ + ++ D
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADT 130
Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
+T + S A ISSL GK+IH V+K +S + + N++I+LY K G + +VF
Sbjct: 131 FTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEE 190
Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
M E+D +SWN++IS Y G+G ++ FK M G KPD+ + + L ACSH
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKM 249
Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
G I V ++ +LD+ + G + AER+ N IQ R+ W + C
Sbjct: 250 GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQ-RNIVAWNVMIGC 307
Query: 668 AAHGNLRLGRIIAGLL 683
A R GR+ L
Sbjct: 308 YA----RNGRVTDAFL 319
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/615 (33%), Positives = 331/615 (53%), Gaps = 23/615 (3%)
Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSF 192
C ++G +A ++FD+MP+R++ +N++I+G T+ G+ + + LF E + +++ D +++
Sbjct: 95 CRELG---FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 193 ASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
A L C L+ G LH LV +G S V ++N LI MY CG + A +F+
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 252 YVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV----- 306
D +S+N ++ G VG EE L M L + SV+ AC C +
Sbjct: 212 R--DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC-CINLNEGFI 268
Query: 307 --GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
G +H K G E V A + MY+ G + EA +F+ + K++V++N MIS +
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 365 AQRN-----LGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFING 416
Q + A +++MQ G+ P TF +L +++ +E IHA + N
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 417 IITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
++ + +ALI YA + Q F + S ++I +W ++I+ + N F
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFR 448
Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
+L S +RP+EYT+S+ +S+CA ++L G+QI GY +K+ + + S+ + I++YAK G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
++ + +VF + D +++A+IS+ AQHG EA++ F++M+ G IKP+Q F VL
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG-IKPNQQAFLGVL 567
Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
AC H GLV G + F M NDY P E H +C++DLLGR G L +AE +I S Q
Sbjct: 568 IACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDH 627
Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
W AL S+C + + +G+ +A L+E E + YVLL NIY +G+ A +REL
Sbjct: 628 PVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVREL 687
Query: 717 LKRTGVIKQPGCSWI 731
++ GV K+P SWI
Sbjct: 688 MRDRGVKKEPALSWI 702
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/560 (23%), Positives = 243/560 (43%), Gaps = 53/560 (9%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
++ N ++ ++ G Y+ A+ LF++ ++ LK D ++ + L C + G LH
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREAN-LKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
+ GL + N ++ +Y S C G +D
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMY----------------------------SKC---GKLD 200
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
A +FD+ +RD +N++I+G G + + L +MH+ + Y+ SVL C
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260
Query: 200 ---DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
+ G +E G +H K G + V AL+ MY G++ +A K+F +
Sbjct: 261 INLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK--NV 318
Query: 257 ISYNVMMDGLASVGRV-----EEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GY 308
++YN M+ G + + EA F DM L PS TF V+ AC + G
Sbjct: 319 VTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Query: 309 QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRN 368
Q+HA K+ F++ + +A I +Y+ G ++ FA ++DI SW +MI + Q
Sbjct: 379 QIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNE 438
Query: 369 LGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSN 425
SA + ++ S IRP+E+T ++++ + E I + +GI V
Sbjct: 439 QLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKT 498
Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
+ IS YAK+ + A Q+F + ++ T++ +I+ +G + L F + ++P
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKP 558
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNN--LISKMSLGNAMITLYAKCGDL-DCSL 542
++ L +C + G + + +KN+ + ++ L + G L D
Sbjct: 559 NQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAEN 617
Query: 543 RVFNMMIEKDTISWNALISA 562
+ + + ++W AL+S+
Sbjct: 618 LILSSGFQDHPVTWRALLSS 637
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 205/445 (46%), Gaps = 46/445 (10%)
Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
+G H +KS + N + MY C ++ A +F R+ E++I+S+N++IS Y
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQ 422
Q A+ +LE + ++ D+FT+ L G +++ E++H V +NG+ +
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVF 184
Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE 482
+ N LI Y+K ++ QA +F R+ ++WN+LI+G++ G + L +++
Sbjct: 185 LINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDG 244
Query: 483 LRPDEYTLSVALSSCA---RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
L Y L L +C + G IH Y K + + + A++ +YAK G L
Sbjct: 245 LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLK 304
Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGE-----GKEAVSCFKAMQDVGRIKPDQATFTA 594
++++F++M K+ +++NA+IS + Q E EA F MQ G ++P +TF+
Sbjct: 305 EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG-LEPSPSTFSV 363
Query: 595 VLSACSHAGLVDDGTRI--------FDS-------MVNDYGFI-PAEDHLSC-------- 630
VL ACS A ++ G +I F S ++ Y + ED + C
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQD 423
Query: 631 ------MLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAG 681
M+D + L+ A R + S HI+ + SACA L G I G
Sbjct: 424 IASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQG 483
Query: 682 LLLEREQDK-PSVYVLLSNIYAAAG 705
++ D SV ++YA +G
Sbjct: 484 YAIKSGIDAFTSVKTSSISMYAKSG 508
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 134/266 (50%), Gaps = 25/266 (9%)
Query: 397 ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
A SG + + ++ H + + + + + N L++ Y K + A Q+F M RNII++N
Sbjct: 58 AKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFN 117
Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
+LI+G+ GF Q ++ F E + L+ D++T + AL C L G+ +HG V+ N
Sbjct: 118 SLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN 177
Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
L ++ L N +I +Y+KCG LD ++ +F+ E+D +SWN+LIS Y + G +E ++
Sbjct: 178 GLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLL 237
Query: 577 KAMQDVGRIKPDQATFTAVLSACS---HAGLVDDGTRI----------FDSMVNDYGFIP 623
M G + +VL AC + G ++ G I FD +V
Sbjct: 238 AKMHRDG-LNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR------ 290
Query: 624 AEDHLSCMLDLLGRAGYLDEAERVIN 649
+ +LD+ + G L EA ++ +
Sbjct: 291 -----TALLDMYAKNGSLKEAIKLFS 311
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
D + + A+ S+ GK HG+++K++L + L N ++ +Y KC +L + ++F
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
+ M E++ IS+N+LIS Y Q G ++A+ F ++ +K D+ T+ L C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEARE-ANLKLDKFTYAGALGFCGERCDL 164
Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA 644
D G + +V G ++ ++D+ + G LD+A
Sbjct: 165 DLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQA 202
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 360/688 (52%), Gaps = 59/688 (8%)
Query: 56 DIYSLSTTLAAC-ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRV 114
D +L L AC +L+ G Q+H ++ +G ++ V+N ++ +Y+ A
Sbjct: 77 DEVTLCLALKACRGDLKR---GCQIHGFSTTSGFTSFVCVSNAVMGMYRKA--------- 124
Query: 115 FSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGI 174
G D A +F+ + D D+ +N +++G +N I +
Sbjct: 125 ----------------------GRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIAL 159
Query: 175 GLFREMHKLDVRRDNYSFASVLSVC--DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITM 232
M V D +++++ LS C G L G QL S V K+G + V N+ ITM
Sbjct: 160 NFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL-LGLQLQSTVVKTGLESDLVVGNSFITM 218
Query: 233 YFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVE-EALIRFRDMLVASLRPSE 291
Y G+ A +VF+E D IS+N ++ GL+ G EA++ FRDM+ +
Sbjct: 219 YSRSGSFRGARRVFDEMS--FKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDH 276
Query: 292 LTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
++F SV++ C ++ Q+H +K G+E+ V N ++ YS CG ++ +F +
Sbjct: 277 VSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQ 336
Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE-- 406
+ E+++VSW TMIS+ A+ +L M+ G+ P+E TF L+ + E ++
Sbjct: 337 MSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Query: 407 -MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
IH G ++ V N+ I+ YAK E ++ A + F +++ R II+WN +I+GF N
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQN 451
Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS--SLRHGKQIHGYVLKNNLISKMS 523
GF + L+ F +E P+EYT L++ A S++ G++ H ++LK L S
Sbjct: 452 GFSHEALKMFLSA-AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPV 510
Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
+ +A++ +YAK G++D S +VFN M +K+ W ++ISAY+ HG+ + ++ F M
Sbjct: 511 VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIK-E 569
Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
+ PD TF +VL+AC+ G+VD G IF+ M+ Y P+ +H SCM+D+LGRAG L E
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
AE +++ ++ +C HGN+++G +A L +E + + YV + NIYA
Sbjct: 630 AEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAE 689
Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
W++AA IR+ +++ V K+ G SWI
Sbjct: 690 KEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 137/512 (26%), Positives = 250/512 (48%), Gaps = 51/512 (9%)
Query: 38 QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
Q AL+ V++ S+ + D ++ ST L+ C G QL + ++ GL++ V N+
Sbjct: 156 QIALNFVVRMKSA-GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNS 214
Query: 98 ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
+++Y + +RVF E+ D+ SW + LS ++ G
Sbjct: 215 FITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF------------------ 256
Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTK 216
G+E + I FR+M + V D+ SF SV++ C L+ RQ+H L K
Sbjct: 257 ----------GFEAVVI--FRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIK 304
Query: 217 SGFSCLVSVVNALITMYFNCGNVVDACK-VFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
G+ L+ V N L++ Y CG V++A K VF + + +S+ M+ ++A
Sbjct: 305 RGYESLLEVGNILMSRYSKCG-VLEAVKSVFHQMSER--NVVSWTTMIS-----SNKDDA 356
Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITM 332
+ F +M + P+E+TFV +++A C + G ++H +K+GF + SV N+ IT+
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL 416
Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
Y+ +++A F + ++I+SWN MIS +AQ A+ +L + + P+E+TF
Sbjct: 417 YAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTF 475
Query: 393 GSLLASSGFIEMV-----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNM 447
GS+L + F E + + HA + G+ + VS+AL+ YAK I ++ ++F+ M
Sbjct: 476 GSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
Query: 448 SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
S +N W ++I+ + +G + F +++ + PD T L++C R + G
Sbjct: 536 SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGY 595
Query: 508 QIHGYVLK-NNLISKMSLGNAMITLYAKCGDL 538
+I +++ NL + M+ + + G L
Sbjct: 596 EIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRL 627
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 217/699 (31%), Positives = 348/699 (49%), Gaps = 60/699 (8%)
Query: 52 KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSV 111
+L P +L L + RN G +H +R G AN +++ Y L
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 112 KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYED 171
+F+ I DV SW N++ITG ++NG
Sbjct: 69 HSIFNAIICKDVVSW-------------------------------NSLITGYSQNG--- 94
Query: 172 IGIG-------LFREMHKLDVRRDNYSFASVLSVCDAGLLE--FGRQLHSLVTKSGFSCL 222
GI LFREM D+ + Y+ A + ++ L GRQ H+LV K
Sbjct: 95 -GISSSYTVMQLFREMRAQDILPNAYTLAGIFKA-ESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 223 VSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY--NVMMDGLASVGRVEEALIRFR 280
+ V +L+ MY G V D KVF Y+ + +Y + M+ G A+ GRVEEA+ F
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVF----AYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 281 DMLVASLRPSELTFV-----SVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
L S+ +V S ++A + +G Q+H +K+G + ++SNA +TMYS
Sbjct: 209 LFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK 268
Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF-GS 394
C ++EAC +F +++ ++W+ M++ Y+Q A+ + M S GI+P E+T G
Sbjct: 269 CESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGV 328
Query: 395 LLASSG--FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
L A S ++E + +H+F+ G ++ + AL+ YAK + A + F + R++
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
W +LI+G++ N + L + + + + P++ T++ L +C+ +++L GKQ+HG+
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 513 VLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEA 572
+K+ ++ +G+A+ T+Y+KCG L+ VF KD +SWNA+IS + +G+G EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML 632
+ F+ M G ++PD TF ++SACSH G V+ G F+ M + G P DH +CM+
Sbjct: 509 LELFEEMLAEG-MEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMV 567
Query: 633 DLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
DLL RAG L EA+ I S +I W L SAC HG LG L+ + S
Sbjct: 568 DLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS 627
Query: 693 VYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
YV LS IY A G + + + ++ GV K+ GCSWI
Sbjct: 628 TYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWI 666
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/584 (25%), Positives = 280/584 (47%), Gaps = 43/584 (7%)
Query: 41 LHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILS 100
+ LF ++ + L P+ Y+L+ A ++L+++ G Q HA ++ +V +++
Sbjct: 103 MQLFREMRAQDIL-PNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVG 161
Query: 101 LYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAM 160
+Y A + +VF+ + + Y+W+T +S G V+ A +VF+
Sbjct: 162 MYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL------------ 209
Query: 161 ITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVTKSGF 219
RE K + +Y F +VLS A + + GRQ+H + K+G
Sbjct: 210 ---------------FLRE--KEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 220 SCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF 279
V++ NAL+TMY C ++ +ACK+F+ + + I+++ M+ G + G EA+ F
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDR--NSITWSAMVTGYSQNGESLEAVKLF 310
Query: 280 RDMLVASLRPSELTFVSVMSAC--LC-PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSC 336
M A ++PSE T V V++AC +C G Q+H+ +K GFE + + A + MY+
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 337 GKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL 396
G + +A F LQE+D+ W ++IS Y Q + A++ Y M++ GI P++ T S+L
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430
Query: 397 ---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNII 453
+S +E+ + +H +G + + +AL + Y+K ++ +F ++++
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 454 TWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYV 513
+WN +I+G NG + L+ F E+L + PD+ T +S+C+ + G +
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 514 LKN-NLISKMSLGNAMITLYAKCGDL-DCSLRVFNMMIEKDTISWNALISAYAQHGEGKE 571
L K+ M+ L ++ G L + + + I+ W L+SA HG+ +
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610
Query: 572 AVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSM 615
V + + +G + +T+ + + G + D R++ M
Sbjct: 611 GVYAGEKLMALG--SRESSTYVQLSGIYTALGRMRDVERVWKHM 652
Score = 119 bits (299), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 35/271 (12%)
Query: 32 SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
S++G +A+ LF ++ S+ +KP Y++ L AC+++ G QLH++ L+ G + +
Sbjct: 298 SQNGESLEAVKLFSRMFSA-GIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 92 PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
++ +Y A L ++ F +Q DV WT+
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTS----------------------- 393
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
+I+G +N + + L+R M + ++ + ASVL C + LE G+Q+
Sbjct: 394 --------LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
H K GF V + +AL TMY CG++ D VF D +S+N M+ GL+ G
Sbjct: 446 HGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNK--DVVSWNAMISGLSHNG 503
Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
+ +EAL F +ML + P ++TFV+++SAC
Sbjct: 504 QGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 16/239 (6%)
Query: 479 LMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDL 538
+EL P TL L+ ++ +L G+ +HG +++ + + N ++ YAKCG L
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 539 DCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDV--GRIKPDQATFTAVL 596
+ +FN +I KD +SWN+LI+ Y+Q+G + + + +++ I P+ T +
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 597 SACS--HAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQ 654
A S + V ++ +G I + + ++ + +AG +++ +V + +
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVD---TSLVGMYCKAGLVEDGLKVF-AYMPE 181
Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLL-EREQDKPSVYV-------LLSNIYAAAG 705
+ W + S A G + + L L E+E+ S YV L + IY G
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLG 240
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 38 QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
++AL L+ ++ ++ + P+ ++++ L AC++L G Q+H + ++ G + +
Sbjct: 405 EEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 463
Query: 98 ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PD 151
+ ++Y L VF N DV SW +S + G D A E+F++M PD
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPD 523
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK---LDVRRDNYS 191
D+ N +I+ C+ G+ + G F M LD + D+Y+
Sbjct: 524 -DVTFVN-IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 335 bits (858), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/622 (32%), Positives = 334/622 (53%), Gaps = 15/622 (2%)
Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
D+Y L + K G + YA +FD+MP RD +N MI+G T G + LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 182 KLDVRRDNYSFASVLS-VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVV 240
+ D YSF+ +L + + G Q+H LV K G+ C V V ++L+ MY C V
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 241 DACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDM-LVASLRPSELTFVSVMS 299
DA + F+E + +S+N ++ G V ++ A M + A++ TF +++
Sbjct: 154 DAFEAFKEISE--PNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 300 ACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIV 355
P + QVHA+ +K G + ++ NA I+ Y+ CG + +A +F L KD++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 356 SWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMV--EMIHAFV 412
SWN+MI+ +++ L SA +++MQ + D +T+ LL A SG + + +H V
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 413 FINGIITNIQVSNALISAYAK--NERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQ 470
G+ +NALIS Y + ++ A +F ++ +++I+WN++I GF G
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 471 GLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT 530
++ FS L SE++ D+Y S L SC+ +++L+ G+QIH K+ +S + +++I
Sbjct: 392 AVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIV 451
Query: 531 LYAKCGDLDCSLRVFNMMIEK-DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
+Y+KCG ++ + + F + K T++WNA+I YAQHG G+ ++ F M + +K D
Sbjct: 452 MYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN-QNVKLDH 510
Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
TFTA+L+ACSH GL+ +G + + M Y P +H + +DLLGRAG +++A+ +I
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
S + C A G + + +A LLE E + YV LS++Y+ WEE
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 710 AANIRELLKRTGVIKQPGCSWI 731
A++++++K GV K PG SWI
Sbjct: 631 KASVKKMMKERGVKKVPGWSWI 652
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 149/608 (24%), Positives = 271/608 (44%), Gaps = 78/608 (12%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N ++ + G +DA LF + S D YS S L A+++ G Q+H +
Sbjct: 70 NTMISGYTSCGKLEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVI 128
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G + +V ++++ +Y + F EI P+ SW ++ ++ + A
Sbjct: 129 KGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFW 188
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
+ M EM K V D +FA +L++ D +
Sbjct: 189 LLGLM-----------------------------EM-KAAVTMDAGTFAPLLTLLDDPMF 218
Query: 205 -EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
+Q+H+ V K G +++ NA+I+ Y +CG+V DA +VF+ G D IS+N M+
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK-DLISWNSMI 277
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
G + E A F M + T+ ++SAC G +H +K G E
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 321 AYTSVSNAAITMYSS--CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
TS +NA I+MY G +++A +F L+ KD++SWN++I+ +AQ+ L A+ +
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
++S I+ D++ F +LL S +++ + IHA +G ++N V ++LI Y+K
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCG 457
Query: 436 RIKQAYQIFHNMSPRN-IITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVAL 494
I+ A + F +S ++ + WN +I G+ +G L FS++ ++ D T + L
Sbjct: 458 IIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAIL 517
Query: 495 SSCARISSLRHGKQI--------------------------HGYVLK-NNLISKMSLGNA 527
++C+ ++ G ++ G V K LI M L
Sbjct: 518 TACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPD 577
Query: 528 MITLYA------KCGDLDCSLRVFNMMIE---KDTISWNALISAYAQHGEGKEAVSCFKA 578
+ L CG+++ + +V N ++E +D ++ +L Y+ + +E S K
Sbjct: 578 PMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKM 637
Query: 579 MQDVGRIK 586
M++ G K
Sbjct: 638 MKERGVKK 645
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 14/300 (4%)
Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
H A+K G + VSN + Y G + A M+F + ++D VSWNTMIS Y
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 370 GRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNA 426
A + M+ G D ++F LL AS ++ E +H V G N+ V ++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-----LLNGFPVQGLQHFSELLMS 481
L+ YAK ER++ A++ F +S N ++WN LI GF + F + GL + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME----MKA 197
Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
+ D T + L+ KQ+H VLK L ++++ NAMI+ YA CG + +
Sbjct: 198 AVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDA 257
Query: 542 LRVFN-MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACS 600
RVF+ + KD ISWN++I+ +++H + A F MQ ++ D T+T +LSACS
Sbjct: 258 KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACS 316
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L+ N + ++ G +DA+ F + SS ++K D Y+ S L +C++L G Q+H
Sbjct: 373 LISWNSIITGFAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
A A ++G + V ++++ +Y + S ++ F +I + H
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK----------------HST 475
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
A +NAMI G ++G + + LF +M +V+ D+ +F ++L+ C
Sbjct: 476 VA--------------WNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 201 -AGLLEFGRQLHSLV 214
GL++ G +L +L+
Sbjct: 522 HTGLIQEGLELLNLM 536
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 334 bits (857), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 290/543 (53%), Gaps = 42/543 (7%)
Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRF----RDM 282
N L+ Y G + + FE+ D +++NV+++G + G V A+ + RD
Sbjct: 76 NNLLLAYSKAGLISEMESTFEKLPDR--DGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDF 133
Query: 283 LVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS-------- 334
R + +T + + S+ +G Q+H Q +K GFE+Y V + + MY+
Sbjct: 134 SANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDA 193
Query: 335 -----------------------SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
+CG I++A +F R EKD VSW MI AQ L +
Sbjct: 194 KKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAK 252
Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALI 428
AI + EM+ G++ D++ FGS+L + G + + + IHA + +I V +ALI
Sbjct: 253 EAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALI 312
Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
Y K + + A +F M +N+++W ++ G+ G + ++ F ++ S + PD Y
Sbjct: 313 DMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHY 372
Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMM 548
TL A+S+CA +SSL G Q HG + + LI +++ N+++TLY KCGD+D S R+FN M
Sbjct: 373 TLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Query: 549 IEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDG 608
+D +SW A++SAYAQ G E + F M G +KPD T T V+SACS AGLV+ G
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKG 491
Query: 609 TRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACA 668
R F M ++YG +P+ H SCM+DL R+G L+EA R IN + W L SAC
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 669 AHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGC 728
GNL +G+ A L+E + P+ Y LLS+IYA+ G W+ A +R ++ V K+PG
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 729 SWI 731
SWI
Sbjct: 612 SWI 614
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 149/548 (27%), Positives = 262/548 (47%), Gaps = 41/548 (7%)
Query: 61 STTLAACANL--RNAA-FGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSE 117
S + C L RN + + +H +RA + N I+ Y + +RVF
Sbjct: 7 SVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDR 66
Query: 118 IQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLF 177
I P+++SW L A +K G + F+K+PDRD +N +I G + +G + +
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 178 REMHK-LDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
M + + ++L + + G + G+Q+H V K GF + V + L+ MY N
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 236 CGNVVDACKVF------------------------EEA----KGYVCDHISYNVMMDGLA 267
G + DA KVF E+A +G D +S+ M+ GLA
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLA 246
Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTS 324
G +EA+ FR+M V L+ + F SV+ AC G Q+HA +++ F+ +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
V +A I MY C + A +F R+++K++VSW M+ Y Q A+ +L+MQ G
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 385 IRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
I PD +T G +++ + +E H +G+I + VSN+L++ Y K I +
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
++F+ M+ R+ ++W +++ + G V+ +Q F +++ L+PD TL+ +S+C+R
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 502 SLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNAL 559
+ G++ + ++ + + MI L+++ G L+ ++R N M D I W L
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 560 ISAYAQHG 567
+SA G
Sbjct: 547 LSACRNKG 554
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 205/411 (49%), Gaps = 12/411 (2%)
Query: 59 SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
+L T L ++ + + G Q+H ++ G ++Y V + +L +Y N + K+VF +
Sbjct: 141 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGL 200
Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
+ + + + + G ++ A ++F M ++D + AMI G +NG I FR
Sbjct: 201 DDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCG 237
EM ++ D Y F SVL C G + G+Q+H+ + ++ F + V +ALI MY C
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 238 NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
+ A VF+ K + +S+ M+ G GR EEA+ F DM + + P T
Sbjct: 320 CLHYAKTVFDRMKQK--NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
+SAC G Q H +A+ SG Y +VSN+ +T+Y CG ID++ +F + +D
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFI 414
VSW M+S YAQ I + +M G++PD T ++++ +VE + +
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 415 ----NGIITNIQVSNALISAYAKNERIKQAYQIFHNMS-PRNIITWNTLIN 460
GI+ +I + +I ++++ R+++A + + M P + I W TL++
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 169/379 (44%), Gaps = 46/379 (12%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
+ L+++G ++A+ F ++ LK D Y + L AC L G Q+HA +R
Sbjct: 242 IKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 88 LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
+ + +V + ++ +Y + L YA VFD
Sbjct: 301 FQDHIYVGSALIDMYCKCKCL-------------------------------HYAKTVFD 329
Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEF 206
+M +++ + AM+ G + G + + +F +M + + D+Y+ +S C + LE
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGL 266
G Q H SG V+V N+L+T+Y CG++ D+ ++F E V D +S+ M+
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN--VRDAVSWTAMVSAY 447
Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAMKSGFEAY 322
A GR E + F M+ L+P +T V+SA C R G Q + + M S +
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA--CSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 323 TSVSNAA--ITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRNLGRSAILAYLE 379
S+ + + I ++S G+++EA + D + W T++S A RN G I +
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS--ACRNKGNLEIGKWAA 563
Query: 380 MQSVGIRPDEFTFGSLLAS 398
+ + P +LL+S
Sbjct: 564 ESLIELDPHHPAGYTLLSS 582
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 148/368 (40%), Gaps = 74/368 (20%)
Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGF-- 462
V+MIH + + N ++ AYA + A ++F + N+ +WN L+ +
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 463 ------------------------LLNGFPVQGLQHFSELLMSELRPD------EYTLSV 492
L+ G+ + GL + + + D TL
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAK------------------ 534
L + + GKQIHG V+K S + +G+ ++ +YA
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 535 -------------CGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQD 581
CG ++ +L++F M EKD++SW A+I AQ+G KEA+ CF+ M+
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 582 VGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRA 638
G +K DQ F +VL AC G +++G +I ++ +DH+ S ++D+ +
Sbjct: 264 QG-LKMDQYPFGSVLPACGGLGAINEGKQIHACIIR----TNFQDHIYVGSALIDMYCKC 318
Query: 639 GYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLS 698
L A+ V + Q +W A+ G I L ++R P Y L
Sbjct: 319 KCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIF-LDMQRSGIDPDHYTLGQ 376
Query: 699 NIYAAAGL 706
I A A +
Sbjct: 377 AISACANV 384
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 491 SVALSSC----ARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
SV + C AR S R+ K IHG +++ + L N ++ YA + RVF+
Sbjct: 7 SVQIKQCIGLGARNQS-RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
+ + + SWN L+ AY++ G E S F+ + D D T+ ++ S +GLV
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD-----RDGVTWNVLIEGYSLSGLVG 120
Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
+ +++M+ D+ L ML L G++ +++
Sbjct: 121 AAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQI 161
Score = 37.0 bits (84), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 8/160 (5%)
Query: 35 GHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHV 94
G + + LF ++ H LKPD +L+ ++AC+ G Q + + + P +
Sbjct: 451 GRAVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKG-QRYFKLMTSEYGIVPSI 508
Query: 95 AN--TILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVD---YACEVFDK 148
+ ++ L+ + L R + + PD WTT LSAC G+++ +A E +
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 149 MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
+ Y + + G D L R M + +V+++
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 219/686 (31%), Positives = 339/686 (49%), Gaps = 34/686 (4%)
Query: 67 CANLRNAAFGNQLHAYALRAGLKAYP----HVANTILSLYKNARDLVSVKRVFSEIQNP- 121
C +R F + A L + P H +L D +S K + +I
Sbjct: 20 CNRIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKG 79
Query: 122 ---DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG--CTENGYEDIGIGL 176
D+++ L+A K G A +FD+MP+R+ + + G C + IGL
Sbjct: 80 SCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDP------IGL 133
Query: 177 FREMHKLDVRRDNYSFASVLSV-CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
+ +H+ + + F S L + E LHS + K G+ V ALI Y
Sbjct: 134 YSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSV 193
Query: 236 CGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV----GRVEEALIRFRDMLVASLRPSE 291
CG+V A VFE G +C I V+ G+ S G E++L M +A P+
Sbjct: 194 CGSVDSARTVFE---GILCKDI---VVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247
Query: 292 LTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFAR 348
TF + + A + VH Q +K+ + V + +Y+ G + +A +F
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 349 LQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MV 405
+ + D+V W+ MI+ + Q A+ ++ M+ + P+EFT S+L + +
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 406 EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLN 465
E +H V G +I VSNALI YAK E++ A ++F +S +N ++WNT+I G+
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 466 GFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLG 525
G + F E L +++ E T S AL +CA ++S+ G Q+HG +K N K+++
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 526 NAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRI 585
N++I +YAKCGD+ + VFN M D SWNALIS Y+ HG G++A+ M+D
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD-C 546
Query: 586 KPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAE 645
KP+ TF VLS CS+AGL+D G F+SM+ D+G P +H +CM+ LLGR+G LD+A
Sbjct: 547 KPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAM 606
Query: 646 RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
++I + W A+ SA N R A +L+ + YVL+SN+YA A
Sbjct: 607 KLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAK 666
Query: 706 LWEEAANIRELLKRTGVIKQPGCSWI 731
W A+IR+ +K GV K+PG SWI
Sbjct: 667 QWANVASIRKSMKEMGVKKEPGLSWI 692
Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 198/437 (45%), Gaps = 43/437 (9%)
Query: 33 RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
+G+++D+L L + + P+ Y+ T L A L F +H L+ P
Sbjct: 224 ENGYFEDSLKLLSCMRMA-GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 93 HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
V +L LY D+ +VF+E+ DV W+
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSF------------------------ 318
Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLH 211
MI +NG+ + + LF M + V + ++ +S+L+ C G G QLH
Sbjct: 319 -------MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLH 371
Query: 212 SLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGR 271
LV K GF + V NALI +Y C + A K+F E + +S+N ++ G ++G
Sbjct: 372 GLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK--NEVSWNTVIVGYENLGE 429
Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNA 328
+A FR+ L + +E+TF S + AC +G QVH A+K+ +VSN+
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
I MY+ CG I A +F ++ D+ SWN +IS Y+ LGR A+ M+ +P+
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 389 EFTFGSLL---ASSGFIEM-VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
TF +L +++G I+ E + + +GI ++ ++ ++ ++ +A ++
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 445 HNMS-PRNIITWNTLIN 460
+ +++ W +++
Sbjct: 610 EGIPYEPSVMIWRAMLS 626
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 58/356 (16%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
+A ++G +A+ LF+++ + + P+ ++LS+ L CA + + G QLH ++ G
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVV-PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 88 LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
+V+N ++ +Y + + ++F+E+ + + SW T +
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV---------------- 422
Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIG-----LFREMHKLDVRRDNYSFASVLSVCDA- 201
GYE++G G +FRE + V +F+S L C +
Sbjct: 423 --------------------GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASL 462
Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
++ G Q+H L K+ + V+V N+LI MY CG++ A VF E + D S+N
Sbjct: 463 ASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME--TIDVASWNA 520
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQ--------VHAQ 313
++ G ++ G +AL M +P+ LTF+ V+S C + Q +
Sbjct: 521 LISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMISTYAQRN 368
++ E YT + + + G++D+A + + E ++ W M+S +N
Sbjct: 581 GIEPCLEHYTCM----VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQN 632
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 330 bits (847), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 201/683 (29%), Positives = 349/683 (51%), Gaps = 46/683 (6%)
Query: 59 SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
S L ACA LR+ G++LH+ ++ G + + N ++S+Y DL + +R+F
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGF 243
Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
Q D ++N++++ + +G + LFR
Sbjct: 244 QEKG------------------------------DAVLWNSILSSYSTSGKSLETLELFR 273
Query: 179 EMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSG-FSCLVSVVNALITMYFNC 236
EMH ++Y+ S L+ CD + G+++H+ V KS S + V NALI MY C
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 237 GNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVS 296
G + A ++ + D +++N ++ G +EAL F DM+ A + E++ S
Sbjct: 334 GKMPQAERILRQMNN--ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTS 391
Query: 297 VMSACLCPRV-----GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE 351
+++A R+ G ++HA +K G+++ V N I MYS C F R+ +
Sbjct: 392 IIAAS--GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD 449
Query: 352 KDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE---MVEMI 408
KD++SW T+I+ YAQ + A+ + ++ + DE GS+L +S ++ +V+ I
Sbjct: 450 KDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEI 509
Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
H + G++ + + N L+ Y K + A ++F ++ +++++W ++I+ LNG
Sbjct: 510 HCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNE 568
Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
+ ++ F ++ + L D L LS+ A +S+L G++IH Y+L+ + S+ A+
Sbjct: 569 SEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 628
Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
+ +YA CGDL + VF+ + K + + ++I+AY HG GK AV F M+ + PD
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPD 687
Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVI 648
+F A+L ACSHAGL+D+G M ++Y P +H C++D+LGRA + EA +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 649 NSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWE 708
+ ++ W AL +AC +H +G I A LLE E P VL+SN++A G W
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 709 EAANIRELLKRTGVIKQPGCSWI 731
+ +R +K +G+ K PGCSWI
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWI 830
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 182/634 (28%), Positives = 308/634 (48%), Gaps = 60/634 (9%)
Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
K G +D A +VFD+MPDR +N MI NG + L+ M V SF +
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPA 187
Query: 195 VLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE--EAK 250
+L C A L + G +LHSL+ K G+ +VNAL++MY ++ A ++F+ + K
Sbjct: 188 LLKAC-AKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 246
Query: 251 GYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVG 307
G D + +N ++ ++ G+ E L FR+M + P+ T VS ++AC ++G
Sbjct: 247 G---DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLG 303
Query: 308 YQVHAQAMKSG-FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
++HA +KS + V NA I MY+ CGK+ +A I ++ D+V+WN++I Y Q
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIE--MVEM-IHAFVFINGIITNIQV 423
+ + A+ + +M + G + DE + S++A+SG + + M +HA+V +G +N+QV
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
N LI Y+K + F M +++I+W T+I G+ N V+ L+ F ++ +
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 484 RPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLR 543
DE L L + + + S+ K+IH ++L+ L+ + + N ++ +Y KC ++ + R
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATR 542
Query: 544 VFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
VF + KD +SW ++IS+ A +G EAV F+ M + G + D +LSA +
Sbjct: 543 VFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETG-LSADSVALLCILSAAASLS 601
Query: 604 LVDDGTRIFDSMVNDYGF-------IPAEDHLSCMLDLLGRAGYLDEAER--------VI 648
++ G I ++ GF + D +C DL D ER +I
Sbjct: 602 ALNKGREIHCYLLRK-GFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 649 NS-----------------QHIQARSDN--WWALFSACAAHGNLRLGRIIAGLL--LERE 687
N+ +H D+ + AL AC+ G L GR G L +E E
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGR---GFLKIMEHE 717
Query: 688 ---QDKPSVYVLLSNIYAAAGLWEEAANIRELLK 718
+ P YV L ++ A EA +++K
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 161/299 (53%), Gaps = 9/299 (3%)
Query: 307 GYQVHAQAMKSGFEAYT--SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
G Q+H++ K+ F ++ ++ + MY CG +D+A +F + ++ +WNTMI Y
Sbjct: 99 GRQLHSRIFKT-FPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAY 157
Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNI 421
SA+ Y M+ G+ +F +LL + + + +H+ + G +
Sbjct: 158 VSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 217
Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWNTLINGFLLNGFPVQGLQHFSELLM 480
+ NAL+S YAKN+ + A ++F + + + WN++++ + +G ++ L+ F E+ M
Sbjct: 218 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 277
Query: 481 SELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL-ISKMSLGNAMITLYAKCGDLD 539
+ P+ YT+ AL++C S + GK+IH VLK++ S++ + NA+I +Y +CG +
Sbjct: 278 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSA 598
+ R+ M D ++WN+LI Y Q+ KEA+ F M G K D+ + T++++A
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAA 395
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/562 (21%), Positives = 231/562 (41%), Gaps = 61/562 (10%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N L++ S SG + L LF ++H + P+ Y++ + L AC A G ++HA L
Sbjct: 253 NSILSSYSTSGKSLETLELFREMHMTGP-APNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 85 RAGLKAYP-HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
++ + +V N ++++Y + +R+ ++ N DV +W
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW----------------- 354
Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD--A 201
N++I G +N + F +M + D S S+++ +
Sbjct: 355 --------------NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
LL G +LH+ V K G+ + V N LI MY C + F + + D IS+
Sbjct: 401 NLLA-GMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAF--LRMHDKDLISWTT 457
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSG 318
++ G A EAL FRD+ + E+ S++ A + + ++H ++ G
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
T + N + +Y C + A +F ++ KD+VSW +MIS+ A A+ +
Sbjct: 518 L-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 379 EMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNE 435
M G+ D +L+++ + + IH ++ G ++ A++ YA
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCG 636
Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
++ A +F + + ++ + ++IN + ++G ++ F ++ + PD + L
Sbjct: 637 DLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLY 696
Query: 496 SCARISSLRHGKQI-----HGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFN---- 546
+C+ L G+ H Y L+ + L G +C + F
Sbjct: 697 ACSHAGLLDEGRGFLKIMEHEYELE-------PWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 547 MMIEKDTISWNALISAYAQHGE 568
M E W AL++A H E
Sbjct: 750 MKTEPTAEVWCALLAACRSHSE 771
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 111/243 (45%), Gaps = 20/243 (8%)
Query: 473 QHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS-LGNAMITL 531
+ F L +SE + L C + ++ G+Q+H + K ++ L ++ +
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM 125
Query: 532 YAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQAT 591
Y KCG LD + +VF+ M ++ +WN +I AY +GE A++ + M+ G + ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG-VPLGLSS 184
Query: 592 FTAVLSACSHAGLVDDGTRIFDSMV----NDYGFIPAEDHLSCMLDLLGRAGYLDEAERV 647
F A+L AC+ + G+ + +V + GFI ++ ++ + + L A R+
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI-----VNALVSMYAKNDDLSAARRL 239
Query: 648 INSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQ----DKPSVYVLLSNIYAA 703
+ + + W ++ S+ + G+ + L L RE P+ Y ++S + A
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTS-----GKSLETLELFREMHMTGPAPNSYTIVSALTAC 294
Query: 704 AGL 706
G
Sbjct: 295 DGF 297
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 207/604 (34%), Positives = 322/604 (53%), Gaps = 20/604 (3%)
Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE-MHKLDVRRDNYSFAS 194
+G+V A FD + +RD+ +N MI+G G I F M + D +F S
Sbjct: 99 LGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPS 158
Query: 195 VLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
VL C + G ++H L K GF V V +LI +Y V +A +F+E V
Sbjct: 159 VLKACRTVI--DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP--VR 214
Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQV 310
D S+N M+ G G +EAL L LR + +T VS++SAC G +
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTI 269
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
H+ ++K G E+ VSN I +Y+ G++ + +F R+ +D++SWN++I Y
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 371 RSAILAYLEMQSVGIRPDEFTF---GSLLASSGFIEMVEMIHAFVFING-IITNIQVSNA 426
AI + EM+ I+PD T S+L+ G I + F G + +I + NA
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA 389
Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS-ELRP 485
++ YAK + A +F+ + ++I+WNT+I+G+ NGF + ++ ++ + E+
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
++ T L +C++ +LR G ++HG +LKN L + + ++ +Y KCG L+ +L +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
+ +++ WN LI+ + HG G++AV FK M D G +KPD TF +LSACSH+GLV
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGLV 568
Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
D+G F+ M DYG P+ H CM+D+ GRAG L+ A + I S +Q + W AL S
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
AC HGN+ LG+I + L E E + +VLLSN+YA+AG WE IR + G+ K
Sbjct: 629 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 726 PGCS 729
PG S
Sbjct: 689 PGWS 692
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 152/587 (25%), Positives = 268/587 (45%), Gaps = 60/587 (10%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N+ ++ R+G+ + + F S L PD + + L AC R GN++H AL
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLAL 177
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ G +VA +++ LY + + N +
Sbjct: 178 KFGFMWDVYVAASLIHLYSR----------YKAVGNARI--------------------- 206
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGL 203
+FD+MP RD+ +NAMI+G ++G + L + + D+ + S+LS C +AG
Sbjct: 207 LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGD 262
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
G +HS K G + V N LI +Y G + D KVF+ + YV D IS+N ++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD--RMYVRDLISWNSII 320
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFV---SVMSACLCPRVGYQVHAQAMKSG-F 319
+ A+ F++M ++ ++P LT + S++S R V ++ G F
Sbjct: 321 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 380
Query: 320 EAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
++ NA + MY+ G +D A +F L D++SWNT+IS YAQ AI Y
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 380 MQSVG-IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
M+ G I ++ T+ S+L + +G + +H + NG+ ++ V +L Y K
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCG 500
Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
R++ A +F+ + N + WNTLI +G + + F E+L ++PD T LS
Sbjct: 501 RLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
Query: 496 SCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDT 553
+C+ + G+ + + + + M+ +Y + G L+ +L+ + +M ++ D
Sbjct: 561 ACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDA 620
Query: 554 ISWNALISAYAQHGE---GKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
W AL+SA HG GK A + + ++P+ + +LS
Sbjct: 621 SIWGALLSACRVHGNVDLGK------IASEHLFEVEPEHVGYHVLLS 661
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 206/453 (45%), Gaps = 46/453 (10%)
Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
+HA+ + S +S + +Y G + A F +Q +D+ +WN MIS Y +
Sbjct: 73 LHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGN 132
Query: 370 GRSAILAY-LEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALI 428
I + L M S G+ PD TF S+L + + IH G + ++ V+ +LI
Sbjct: 133 SSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLI 192
Query: 429 SAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DE 487
Y++ + + A +F M R++ +WN +I+G+ +G + L L + LR D
Sbjct: 193 HLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDS 247
Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
T+ LS+C G IH Y +K+ L S++ + N +I LYA+ G L +VF+
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG---- 603
M +D ISWN++I AY + + A+S F+ M+ + RI+PD T ++ S S G
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQLGDIRA 366
Query: 604 -------------LVDDGT------------RIFDSMVNDYGFIPAEDHLSCMLDLLGRA 638
++D T + DS + ++P D +S + G A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 639 --GYLDEAERVIN----SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPS 692
G+ EA + N I A W ++ AC+ G LR G + G LL +
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL-KNGLYLD 485
Query: 693 VYVL--LSNIYAAAGLWEEAANIRELLKRTGVI 723
V+V+ L+++Y G E+A ++ + R +
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 518
Score = 90.1 bits (222), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 10/254 (3%)
Query: 402 IEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
++ + +HA + ++ I N+ +S L++ Y + A F ++ R++ WN +I+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 462 FLLNGFPVQGLQHFSELLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS 520
+ G + ++ FS ++S L PD T L +C + G +IH LK +
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMW 183
Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQ 580
+ + ++I LY++ + + +F+ M +D SWNA+IS Y Q G KEA++ ++
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR 243
Query: 581 DVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGY 640
+ D T ++LSAC+ AG + G I + +G + ++DL G
Sbjct: 244 AM-----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK-HGLESELFVSNKLIDLYAEFGR 297
Query: 641 LDEAERVINSQHIQ 654
L + ++V + +++
Sbjct: 298 LRDCQKVFDRMYVR 311
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
++L+ K +H ++ + I + + ++ LY G++ + F+ + +D +WN +I
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYG 620
S Y + G E + CF + PD TF +VL AC V DG +I + +G
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKI-HCLALKFG 180
Query: 621 FIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIA 680
F+ + ++ L R + A + + ++ +W A+ S GN + ++
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG-SWNAMISGYCQSGNAKEALTLS 239
Query: 681 GLLLEREQDKPSVYVLLS 698
L R D +V LLS
Sbjct: 240 NGL--RAMDSVTVVSLLS 255
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 18/264 (6%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
++ N ++ +++G +A+ ++ + ++ + + + L AC+ G +LH
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
L+ GL V ++ +Y L +F +I + W T ++ GH +
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 141 YACEVFDKMPDR----DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
A +F +M D D + +++ C+ +G D G F M + +Y L
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM------QTDYGITPSL 588
Query: 197 SVCDAGLLEFGR--QLHS---LVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKG 251
+ +GR QL + + S+ AL++ GN VD K+ E
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLF 647
Query: 252 YV-CDHISYNVMMDGL-ASVGRVE 273
V +H+ Y+V++ + AS G+ E
Sbjct: 648 EVEPEHVGYHVLLSNMYASAGKWE 671
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 338/664 (50%), Gaps = 46/664 (6%)
Query: 79 LHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMG 137
+H L GL+ + +++++Y +D S + VF DVY W + +S +K
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
EVF ++ + + V D+++F +V+
Sbjct: 86 MFHDTLEVFKRLLNCSICV------------------------------PDSFTFPNVIK 115
Query: 198 VCDAGLLEF-GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
A EF GR +H+LV KSG+ C V V ++L+ MY ++ +VF+E D
Sbjct: 116 AYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPER--DV 173
Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQ 313
S+N ++ G E+AL F M + P+ ++ +SAC L G ++H +
Sbjct: 174 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 233
Query: 314 AMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSA 373
+K GFE V++A + MY C ++ A +F ++ K +V+WN+MI Y + +S
Sbjct: 234 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 293
Query: 374 ILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISA 430
+ M G RP + T S+L + S + + IH +V + + +I V+ +LI
Sbjct: 294 VEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDL 353
Query: 431 YAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTL 490
Y K A +F +WN +I+ ++ G + ++ + +++ ++PD T
Sbjct: 354 YFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF 413
Query: 491 SVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIE 550
+ L +C+++++L GKQIH + ++ L + L +A++ +Y+KCG+ + R+FN + +
Sbjct: 414 TSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
Query: 551 KDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTR 610
KD +SW +ISAY HG+ +EA+ F MQ G +KPD T AVLSAC HAGL+D+G +
Sbjct: 474 KDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 611 IFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN---WWALFSAC 667
F M + YG P +H SCM+D+LGRAG L EA +I Q SDN LFSAC
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEII--QQTPETSDNAELLSTLFSAC 590
Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
H LG IA LL+E D S Y++L N+YA+ W+ A +R +K G+ K+PG
Sbjct: 591 CLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPG 650
Query: 728 CSWI 731
CSWI
Sbjct: 651 CSWI 654
Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/489 (25%), Positives = 227/489 (46%), Gaps = 40/489 (8%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N ++ S++ + D L +F ++ + PD ++ + A L G +H +
Sbjct: 75 NSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVV 134
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
++G VA++++ +Y + +VF E+ DV SW T +S + G + A E
Sbjct: 135 KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALE 194
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL- 203
+F +M +G+E ++ S +S C L
Sbjct: 195 LFGRMES---------------SGFEP----------------NSVSLTVAISACSRLLW 223
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
LE G+++H K GF V +AL+ MY C + A +VF++ +++N M+
Sbjct: 224 LERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK--SLVAWNSMI 281
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFE 320
G + G + + M++ RPS+ T S++ AC R G +H ++S
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
A V+ + I +Y CG+ + A +F++ Q+ SWN MIS+Y A+ Y +M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERI 437
SVG++PD TF S+L + + +E IH + + + T+ + +AL+ Y+K
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNE 461
Query: 438 KQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSC 497
K+A++IF+++ +++++W +I+ + +G P + L F E+ L+PD TL LS+C
Sbjct: 462 KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSAC 521
Query: 498 ARISSLRHG 506
+ G
Sbjct: 522 GHAGLIDEG 530
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 18/315 (5%)
Query: 398 SSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR-NIITWN 456
S+ + ++++H + G+ ++ + +LI+ Y + A +F N R ++ WN
Sbjct: 16 STKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWN 75
Query: 457 TLINGFLLNGFPVQGLQHFSELLMSEL-RPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
+L++G+ N L+ F LL + PD +T + + + G+ IH V+K
Sbjct: 76 SLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVK 135
Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
+ + + + ++++ +YAK + SL+VF+ M E+D SWN +IS + Q GE ++A+
Sbjct: 136 SGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALEL 195
Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
F M+ G +P+ + T +SACS ++ G I V GF E S ++D+
Sbjct: 196 FGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMY 253
Query: 636 GRAGYLDEAERVINSQHIQARS-DNWWALFSACAAHGNLR-----LGRIIAGLLLEREQD 689
G+ L+ A V Q + +S W ++ A G+ + L R+I E
Sbjct: 254 GKCDCLEVAREVF--QKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII------EGT 305
Query: 690 KPSVYVLLSNIYAAA 704
+PS L S + A +
Sbjct: 306 RPSQTTLTSILMACS 320
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 14 SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
S T K++ N+ +++ G++ A+ ++ Q+ S +KPD+ + ++ L AC+ L
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAAL 426
Query: 74 AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
G Q+H + L+ + + +L +Y + R+F+ I DV SWT +SA
Sbjct: 427 EKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAY 486
Query: 134 TKMGHVDYACEVFDKMPDRDLP----VYNAMITGCTENGYEDIGIGLFREM 180
G A FD+M L A+++ C G D G+ F +M
Sbjct: 487 GSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/647 (30%), Positives = 339/647 (52%), Gaps = 15/647 (2%)
Query: 96 NTILSLYKNARDLVSVKRVFSEIQ----NPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
NT L +K + + + + ++I D+ T + +G + YA ++F +
Sbjct: 21 NTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQR 80
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVCDAGLLE--FGR 208
D+ ++N ++ G + N + +F + K D++ ++ ++A +S +G + GR
Sbjct: 81 PDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA-SGFRDDRAGR 139
Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
+H G + + + ++ MYF V DA KVF+ D I +N M+ G
Sbjct: 140 VIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK--DTILWNTMISGYRK 197
Query: 269 VGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTS 324
E++ FRD++ S R T + ++ A R+G Q+H+ A K+G ++
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
V I++YS CGKI +F ++ DIV++N MI Y ++ + E+ G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
R T SL+ SG + ++ IH + + +++ VS AL + Y+K I+ A ++F
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLF 377
Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
+++ +WN +I+G+ NG + F E+ SE P+ T++ LS+CA++ +L
Sbjct: 378 DESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALS 437
Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
GK +H V + S + + A+I +YAKCG + + R+F++M +K+ ++WN +IS Y
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
HG+G+EA++ F M + G I P TF VL ACSHAGLV +G IF+SM++ YGF P+
Sbjct: 498 LHGQGQEALNIFYEMLNSG-ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPS 556
Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
H +CM+D+LGRAG+L A + I + I+ S W L AC H + L R ++ L
Sbjct: 557 VKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLF 616
Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
E + D +VLLSNI++A + +AA +R+ K+ + K PG + I
Sbjct: 617 ELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/585 (26%), Positives = 261/585 (44%), Gaps = 51/585 (8%)
Query: 24 LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
N+ + S + +L +F + S LKP+ + + ++A + R+ G +H A
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 84 LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
+ G + + + I+ +Y + ++VF + D W T +S K +
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL-SVCDAG 202
+VF RDL + CT R D + +L +V +
Sbjct: 206 QVF-----RDL-----INESCT--------------------RLDTTTLLDILPAVAELQ 235
Query: 203 LLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVM 262
L G Q+HSL TK+G V+ I++Y CG + +F E + D ++YN M
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRK--PDIVAYNAM 293
Query: 263 MDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAY 322
+ G S G E +L F++++++ R T VS++ + Y +H +KS F ++
Sbjct: 294 IHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSH 353
Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
SVS A T+YS +I+ A +F EK + SWN MIS Y Q L AI + EMQ
Sbjct: 354 ASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQK 413
Query: 383 VGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
P+ T +L A G + + + +H V ++I VS ALI YAK I +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 440 AYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCAR 499
A ++F M+ +N +TWNT+I+G+ L+G + L F E+L S + P T L +C+
Sbjct: 474 ARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 500 ISSLRHGKQIHGYVLKNNLISKMSLGNA------MITLYAKCGDLDCSLRVFNMM-IEKD 552
++ G +I N++I + + M+ + + G L +L+ M IE
Sbjct: 534 AGLVKEGDEIF-----NSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
+ W L+ A H + A + + + + + PD + +LS
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFE---LDPDNVGYHVLLS 630
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 329 bits (843), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/604 (31%), Positives = 319/604 (52%), Gaps = 12/604 (1%)
Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLD--VRRDNYSFAS 194
G++ A +VFDKMP D+ + ++I D + LF M +D V D +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
VL C + + +G LH+ K+ V V ++L+ MY G + +C+VF E
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP--F 171
Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
+ +++ ++ GL GR +E L F +M + TF + AC R G +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
H + GF V+N+ TMY+ CG++ + +F + E+D+VSW ++I Y +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
A+ +++M++ + P+E TF S+ ++ + + E +H V G+ ++ VSN++
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
+ Y+ + A +F M R+II+W+T+I G+ GF +G ++FS + S +P +
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
+ L+ LS ++ + G+Q+H L L ++ +++I +Y+KCG + + +F
Sbjct: 412 FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 548 MIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDD 607
D +S A+I+ YA+HG+ KEA+ F+ VG +PD TF +VL+AC+H+G +D
Sbjct: 472 TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG-FRPDSVTFISVLTACTHSGQLDL 530
Query: 608 GTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSAC 667
G F+ M Y PA++H CM+DLL RAG L +AE++IN + W L AC
Sbjct: 531 GFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIAC 590
Query: 668 AAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPG 727
A G++ GR A +LE + + V L+NIY++ G EEAAN+R+ +K GVIK+PG
Sbjct: 591 KAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
Query: 728 CSWI 731
S I
Sbjct: 651 WSSI 654
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 268/570 (47%), Gaps = 48/570 (8%)
Query: 39 DALHLFVQIHS-SHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
+AL LF + H + PD LS L AC N A+G LHAYA++ L + +V ++
Sbjct: 89 EALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSS 148
Query: 98 ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
+L +YK ++G +D +C VF +MP R+ +
Sbjct: 149 LLDMYK-------------------------------RVGKIDKSCRVFSEMPFRNAVTW 177
Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVT 215
A+ITG G G+ F EM + + D Y+FA L C AGL +++G+ +H+ V
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC-AGLRQVKYGKAIHTHVI 236
Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
GF + V N+L TMY CG + D +FE D +S+ ++ +G+ +A
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSER--DVVSWTSLIVAYKRIGQEVKA 294
Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLC-PRV--GYQVHAQAMKSGFEAYTSVSNAAITM 332
+ F M + + P+E TF S+ SAC R+ G Q+H + G SVSN+ + M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 333 YSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTF 392
YS+CG + A ++F ++ +DI+SW+T+I Y Q G + M+ G +P +F
Sbjct: 355 YSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 393 GSLLASSGFIEMVE---MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSP 449
SLL+ SG + ++E +HA G+ N V ++LI+ Y+K IK+A IF
Sbjct: 415 ASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR 474
Query: 450 RNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
+I++ +ING+ +G + + F + L RPD T L++C L G
Sbjct: 475 DDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHY 534
Query: 510 HGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN-MMIEKDTISWNALISAYAQHG 567
+ + N+ M+ L + G L + ++ N M +KD + W L+ A G
Sbjct: 535 FNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKG 594
Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
+ + +A + + + P AT L+
Sbjct: 595 DIERGR---RAAERILELDPTCATALVTLA 621
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 222/490 (45%), Gaps = 60/490 (12%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
+ L +G Y++ L F ++ S +L D Y+ + L ACA LR +G +H + + G
Sbjct: 181 ITGLVHAGRYKEGLTYFSEMSRSEEL-SDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 88 LKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFD 147
VAN++ ++Y ++ +F + DV SWT+ + A ++G A E F
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 148 KMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEF 206
KM + +P + +FAS+ S C + L +
Sbjct: 300 KMRNSQVP-------------------------------PNEQTFASMFSACASLSRLVW 328
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC-DHISYNVMMDG 265
G QLH V G + +SV N+++ MY CGN+V A +F+ G C D IS++ ++ G
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQ---GMRCRDIISWSTIIGG 385
Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAY 322
G EE F M + +P++ S++S V G QVHA A+ G E
Sbjct: 386 YCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQN 445
Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
++V ++ I MYS CG I EA MIF DIVS MI+ YA+ + AI + +
Sbjct: 446 STVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNA------LISAYAK 433
VG RPD TF S+L + SG +++ F + N + + A ++ +
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDL-----GFHYFNMMQETYNMRPAKEHYGCMVDLLCR 560
Query: 434 NERIKQAYQIFHNMS-PRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
R+ A ++ + MS ++ + W TL+ G +G + +L EL P T +
Sbjct: 561 AGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL--ELDP---TCAT 615
Query: 493 ALSSCARISS 502
AL + A I S
Sbjct: 616 ALVTLANIYS 625
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 317/608 (52%), Gaps = 16/608 (2%)
Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR--RDNYSFAS 194
GH+ YA ++F++MP L YN +I G I +F M V+ D Y++
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
V + ++ G +H + +S F V NAL+ MY N G V A VF+ K
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR- 181
Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
D IS+N M+ G G + +AL+ F M+ S+ T VS++ C + +G V
Sbjct: 182 -DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
H + V NA + MY CG++DEA +F R++ +D+++W MI+ Y +
Sbjct: 241 HKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDV 300
Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNAL 427
+A+ MQ G+RP+ T SL++ G V + +H + + ++I + +L
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSL 360
Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
IS YAK +R+ +++F S + W+ +I G + N L F + ++ P+
Sbjct: 361 ISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
TL+ L + A ++ LR IH Y+ K +S + ++ +Y+KCG L+ + ++FN
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 548 MIEK----DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAG 603
+ EK D + W ALIS Y HG+G A+ F M G + P++ TFT+ L+ACSH+G
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG-VTPNEITFTSALNACSHSG 539
Query: 604 LVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL 663
LV++G +F M+ Y + +H +C++DLLGRAG LDEA +I + + S W AL
Sbjct: 540 LVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Query: 664 FSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI 723
+AC H N++LG + A L E E + YVLL+NIYAA G W++ +R +++ G+
Sbjct: 600 LAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 724 KQPGCSWI 731
K+PG S I
Sbjct: 660 KKPGHSTI 667
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 261/560 (46%), Gaps = 47/560 (8%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQL 79
LL NI + R G Y DA+ +F+++ S K PD Y+ A L++ G +
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 80 HAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHV 139
H LR+ +V N +L++Y N G V
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMN-------------------------------FGKV 168
Query: 140 DYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC 199
+ A +VFD M +RD+ +N MI+G NGY + + +F M V D+ + S+L VC
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 200 -DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
LE GR +H LV + + V NAL+ MY CG + +A VF+ + D I+
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR--DVIT 286
Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAM 315
+ M++G G VE AL R M +RP+ +T S++S C L G +H A+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV 346
Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
+ + + + I+MY+ C ++D +F+ + W+ +I+ Q L A+
Sbjct: 347 RQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALG 406
Query: 376 AYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYA 432
+ M+ + P+ T SLL A+ + IH ++ G ++++ + L+ Y+
Sbjct: 407 LFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 433 KNERIKQAYQIFHNM----SPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEY 488
K ++ A++IF+ + ++++ W LI+G+ ++G LQ F E++ S + P+E
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEI 526
Query: 489 TLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFNM 547
T + AL++C+ + G + ++L++ +++ + ++ L + G LD + +
Sbjct: 527 TFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITT 586
Query: 548 M-IEKDTISWNALISAYAQH 566
+ E + W AL++A H
Sbjct: 587 IPFEPTSTVWGALLAACVTH 606
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 229/460 (49%), Gaps = 17/460 (3%)
Query: 225 VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLV 284
+++ L Y CG++ A K+FEE +SYN+++ G +A+ F M+
Sbjct: 51 ILSTLSVTYALCGHITYARKLFEEMPQ--SSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 285 ASLR--PSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKI 339
++ P T+ V A ++G VH + ++S F V NA + MY + GK+
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 340 DEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASS 399
+ A +F ++ +D++SWNTMIS Y + A++ + M + + D T S+L
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 400 GFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWN 456
G ++ +EM +H V + I+V NAL++ Y K R+ +A +F M R++ITW
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 457 TLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN 516
+ING+ +G L+ + +RP+ T++ +S C + GK +HG+ ++
Sbjct: 289 CMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 517 NLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCF 576
+ S + + ++I++YAKC +D RVF+ + T W+A+I+ Q+ +A+ F
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 577 KAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI-FDSMVNDYGFIPAEDHLSCMLDLL 635
K M+ ++P+ AT ++L A +A L D + + GF+ + D + ++ +
Sbjct: 409 KRMRRED-VEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 636 GRAGYLDEAERVINSQHIQARSDN---WWALFSACAAHGN 672
+ G L+ A ++ N + +S + W AL S HG+
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 207/425 (48%), Gaps = 20/425 (4%)
Query: 310 VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNL 369
+H + G + +S ++T Y+ CG I A +F + + ++S+N +I Y + L
Sbjct: 37 LHCHVITGGRVSGHILSTLSVT-YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGL 95
Query: 370 GRSAILAYLEMQSVGIR--PDEFTFGSLLASSGFIEMVEM---IHAFVFINGIITNIQVS 424
AI ++ M S G++ PD +T+ + ++G ++ +++ +H + + + V
Sbjct: 96 YHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQ 155
Query: 425 NALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELR 484
NAL++ Y +++ A +F M R++I+WNT+I+G+ NG+ L F ++ +
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD 215
Query: 485 PDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRV 544
D T+ L C + L G+ +H V + L K+ + NA++ +Y KCG +D + V
Sbjct: 216 LDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFV 275
Query: 545 FNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGL 604
F+ M +D I+W +I+ Y + G+ + A+ + MQ G ++P+ T +++S C A
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG-VRPNAVTIASLVSVCGDALK 334
Query: 605 VDDGTRIFDSMVND--YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWA 662
V+DG + V Y I E + ++ + + +D RV + + + W A
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIE---TSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSA 390
Query: 663 LFSACAAHGNLRLGRIIAGLL--LEREQDKPSVYVL--LSNIYAAAGLWEEAANIRELLK 718
+ + C + L GL + RE +P++ L L YAA +A NI L
Sbjct: 391 IIAGCVQN---ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 719 RTGVI 723
+TG +
Sbjct: 448 KTGFM 452
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 326 bits (835), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 221/719 (30%), Positives = 349/719 (48%), Gaps = 50/719 (6%)
Query: 59 SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
+LS L C + H YA + GL VA ++++Y + K +F E+
Sbjct: 147 TLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEM 206
Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKM------PDRDLPVYNAMITG--------- 163
DV W L A +MG + A ++ P+ A I+G
Sbjct: 207 PYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVK 266
Query: 164 ----------CTENGYEDIGIG-------------LFREMHKLDVRRDNYSFASVLSVC- 199
+E + + G+ F +M + DV D +F +L+
Sbjct: 267 SFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAV 326
Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
L G+Q+H + K G +++V N+LI MY A VF+ D IS+
Sbjct: 327 KVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSER--DLISW 384
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRVGY----QVHAQAM 315
N ++ G+A G EA+ F +L L+P + T SV+ A G QVH A+
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
K + + VS A I YS + EA ++F R D+V+WN M++ Y Q + G +
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGF---IEMVEMIHAFVFINGIITNIQVSNALISAYA 432
+ M G R D+FT ++ + GF I + +HA+ +G ++ VS+ ++ Y
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 433 KNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSV 492
K + A F ++ + + W T+I+G + NG + FS++ + + PDE+T++
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 493 ALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKD 552
+ + +++L G+QIH LK N + +G +++ +YAKCG +D + +F + +
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Query: 553 TISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIF 612
+WNA++ AQHGEGKE + FK M+ +G IKPD+ TF VLSACSH+GLV + +
Sbjct: 684 ITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGLVSEAYKHM 742
Query: 613 DSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN 672
SM DYG P +H SC+ D LGRAG + +AE +I S ++A + + L +AC G+
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 673 LRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
G+ +A LLE E S YVLLSN+YAAA W+E R ++K V K PG SWI
Sbjct: 803 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWI 861
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 171/670 (25%), Positives = 275/670 (41%), Gaps = 91/670 (13%)
Query: 12 GNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLR 71
GN +S ++ N L+ SG Y L F + S ++ D + LA +
Sbjct: 271 GNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVD 329
Query: 72 NAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLS 131
+ A G Q+H AL+ GL V+N+++++Y R
Sbjct: 330 SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR------------------------- 364
Query: 132 ACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS 191
K G +A VFD M +RDL +N++I G +NG E + LF ++ + ++ D Y+
Sbjct: 365 ---KFG---FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 192 FASVLSVCDA--GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
SVL + L +Q+H K V ALI Y + +A +FE
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER- 477
Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRV 306
+ D +++N MM G + L F M R + T +V C
Sbjct: 478 --HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQ 535
Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
G QVHA A+KSG++ VS+ + MY CG + A F + D V+W TMIS +
Sbjct: 536 GKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 367 RNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE---MIHAFVFINGIITNIQV 423
A + +M+ +G+ PDEFT +L +S + +E IHA + V
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 424 SNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
+L+ YAK I AY +F + NI WN ++ G +G + LQ F ++ +
Sbjct: 656 GTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGI 715
Query: 484 RPDEYTLSVALSSCAR----ISSLRHGKQIHG-YVLK----------------------N 516
+PD+ T LS+C+ + +H + +HG Y +K
Sbjct: 716 KPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAE 775
Query: 517 NLISKMSL---GNAMITLYAKC---GDLDCSLRVFNMMIEKDTISWNALI---SAYAQHG 567
NLI MS+ + TL A C GD + RV ++E + + +A + + YA
Sbjct: 776 NLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAAS 835
Query: 568 EGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGT--------RIFDSMVNDY 619
+ E + + M ++K D + H +VDD + R M+ D
Sbjct: 836 KWDE-MKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDI 894
Query: 620 ---GFIPAED 626
G++P D
Sbjct: 895 KQEGYVPETD 904
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 137/574 (23%), Positives = 254/574 (44%), Gaps = 53/574 (9%)
Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITG---CTENGY 169
R+ + +NP+ + +S +K G + YA VFDKMPDRDL +N+++ +E
Sbjct: 64 RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 170 EDI--GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVV 226
E+I LFR + + V + + +L +C +G + H K G V
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183
Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
AL+ +Y G V + +FEE D + +N+M+ +G EEA+ +
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMP--YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 287 LRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIF 346
L P+E+T R+ ++ +G + N A ++
Sbjct: 242 LNPNEITL----------RLLARISGDDSDAGQVKSFANGNDASSV-------------- 277
Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV- 405
+I+ N +S Y + + + +M + D+ TF +LA++ ++ +
Sbjct: 278 -----SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 406 --EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
+ +H G+ + VSN+LI+ Y K + A +F NMS R++I+WN++I G
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARI-SSLRHGKQIHGYVLKNNLISKM 522
NG V+ + F +LL L+PD+YT++ L + + + L KQ+H + +K N +S
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 523 SLGNAMITLYAKCGDLDCSLRVFNMMIEK---DTISWNALISAYAQHGEGKEAVSCFKAM 579
+ A+I Y++ + ++ ++ E+ D ++WNA+++ Y Q +G + + F M
Sbjct: 453 FVSTALIDAYSR----NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 580 QDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAG 639
G + D T V C ++ G ++ + G+ S +LD+ + G
Sbjct: 509 HKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS-GYDLDLWVSSGILDMYVKCG 566
Query: 640 YLDEAERVINSQHIQARSD-NWWALFSACAAHGN 672
+ A+ +S I D W + S C +G
Sbjct: 567 DMSAAQFAFDS--IPVPDDVAWTTMISGCIENGE 598
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 501 SSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALI 560
S L GK H +L + L N +I++Y+KCG L + RVF+ M ++D +SWN+++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 561 SAYAQHGEG-----KEAVSCFKAM-QDVGRIKPDQATFTAVLSACSHAGLV 605
+AYAQ E ++A F+ + QDV + + T + +L C H+G V
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDV--VYTSRMTLSPMLKLCLHSGYV 161
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 325 bits (834), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 214/696 (30%), Positives = 343/696 (49%), Gaps = 56/696 (8%)
Query: 53 LKPDIYSLSTTLAAC---ANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLV 109
++PD +SLS ++ N R G Q+H + LR L + ++ +Y +
Sbjct: 164 VRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
RVF EI++ ++ ++N MI G +G
Sbjct: 223 DAWRVFVEIEDKS------------------------------NVVLWNVMIVGFGGSGI 252
Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVC----DAGLLEFGRQLHSLVTKSGFSCLVSV 225
+ + L+ V+ + SF L C ++G FGRQ+H V K G V
Sbjct: 253 CESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSG---FGRQIHCDVVKMGLHNDPYV 309
Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHI--SYNVMMDGLASVGRVEEALIRFRDML 283
+L++MY CG V +A VF V D +N M+ A AL F M
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFS----CVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 284 VASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID 340
S+ P T +V+S C + G VHA+ K ++ +++ +A +T+YS CG
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 341 EACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV--GIRPDEFTFGSLLAS 398
+A ++F ++EKD+V+W ++IS + + A+ + +M+ ++PD S+ +
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Query: 399 SGFIEMVEM---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITW 455
+E + +H + G++ N+ V ++LI Y+K + A ++F +MS N++ W
Sbjct: 486 CAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAW 545
Query: 456 NTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLK 515
N++I+ + N P + F+ +L + PD +++ L + + +SL GK +HGY L+
Sbjct: 546 NSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR 605
Query: 516 NNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSC 575
+ S L NA+I +Y KCG + +F M K I+WN +I Y HG+ A+S
Sbjct: 606 LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSL 665
Query: 576 FKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLL 635
F M+ G PD TF +++SAC+H+G V++G IF+ M DYG P +H + M+DLL
Sbjct: 666 FDEMKKAGE-SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 636 GRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYV 695
GRAG L+EA I + I+A S W L SA H N+ LG + A LL E ++ S YV
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 696 LLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
L N+Y AGL EAA + L+K G+ KQPGCSWI
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWI 820
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 198/726 (27%), Positives = 348/726 (47%), Gaps = 76/726 (10%)
Query: 24 LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
+N + L + G Y ALHL+ + S +++ + L AC+ L N ++G +H
Sbjct: 27 INSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSV 86
Query: 84 LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
+ G + P +A +++++Y K G +DYA
Sbjct: 87 VVLGWRYDPFIATSLVNMY-------------------------------VKCGFLDYAV 115
Query: 144 EVFDK-------MPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
+VFD + RD+ V+N+MI G + G+G FR M VR D +S + V+
Sbjct: 116 QVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVV 175
Query: 197 SV-CDAGLL--EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
SV C G E G+Q+H + ++ + ALI MYF G +DA +VF E +
Sbjct: 176 SVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK- 234
Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQV 310
+ + +NVM+ G G E +L + S++ +F + AC G Q+
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
H +K G V + ++MYS CG + EA +F+ + +K + WN M++ YA+ + G
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
SA+ + M+ + PD FT ++++ G + +HA +F I + + +AL
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL 414
Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE--LRP 485
++ Y+K AY +F +M ++++ W +LI+G NG + L+ F ++ + L+P
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKP 474
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
D ++ ++CA + +LR G Q+HG ++K L+ + +G+++I LY+KCG + +L+VF
Sbjct: 475 DSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVF 534
Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
M ++ ++WN++IS Y+++ + ++ F M G I PD + T+VL A S +
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASL 593
Query: 606 DDGTRIFDSMVNDYGF-----IPAEDHL-SCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
G + +G+ IP++ HL + ++D+ + G+ AE + + +Q +S
Sbjct: 594 LKGKSL-------HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIF--KKMQHKSLI 644
Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDK----PSVYVLLSNIYAA--AGLWEEAANI 713
W L +G G I L L E K P LS I A +G EE NI
Sbjct: 645 TWNLM----IYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Query: 714 RELLKR 719
E +K+
Sbjct: 701 FEFMKQ 706
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 164/603 (27%), Positives = 288/603 (47%), Gaps = 49/603 (8%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N+ + SG + +L L++ + ++ +K S + L AC+ N+ FG Q+H +
Sbjct: 241 NVMIVGFGGSGICESSLDLYM-LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
+ GL P+V ++LS+Y +K G V A
Sbjct: 300 KMGLHNDPYVCTSLLSMY-------------------------------SKCGMVGEAET 328
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
VF + D+ L ++NAM+ EN Y + LF M + V D+++ ++V+S C GL
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
+G+ +H+ + K ++ +AL+T+Y CG DA VF+ + D +++ ++
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK--DMVAWGSLI 446
Query: 264 DGLASVGRVEEALIRFRDML--VASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSG 318
GL G+ +EAL F DM SL+P SV +AC R G QVH +K+G
Sbjct: 447 SGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTG 506
Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
V ++ I +YS CG + A +F + +++V+WN+MIS Y++ NL +I +
Sbjct: 507 LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFN 566
Query: 379 EMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
M S GI PD + S+L +S+ + + +H + GI ++ + NALI Y K
Sbjct: 567 LMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCG 626
Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS 495
K A IF M +++ITWN +I G+ +G + L F E+ + PD+ T +S
Sbjct: 627 FSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Query: 496 SCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDT 553
+C + GK I ++ ++ I M M+ L + G L+ + M IE D+
Sbjct: 687 ACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADS 746
Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ-ATFTAVLSACSHAGLVDDGTRIF 612
W L+SA H + + + + + R++P++ +T+ +++ AGL ++ ++
Sbjct: 747 SIWLCLLSASRTHHNVELGI---LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLL 803
Query: 613 DSM 615
M
Sbjct: 804 GLM 806
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 33/204 (16%)
Query: 14 SNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNA 73
++ S E ++ N ++ SR+ + ++ LF + S + PD S+++ L A ++ +
Sbjct: 535 TSMSTENMVAWNSMISCYSRNNLPELSIDLF-NLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 74 AFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSAC 133
G LH Y LR G+ + H+ N ++ +Y
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMY------------------------------- 622
Query: 134 TKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFA 193
K G YA +F KM + L +N MI G +G + LF EM K D+ +F
Sbjct: 623 VKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFL 682
Query: 194 SVLSVCD-AGLLEFGRQLHSLVTK 216
S++S C+ +G +E G+ + + +
Sbjct: 683 SLISACNHSGFVEEGKNIFEFMKQ 706
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/603 (31%), Positives = 315/603 (52%), Gaps = 14/603 (2%)
Query: 133 CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCT-ENGYEDIGIGLFREMHKLDVRRDNYS 191
C K A ++F +M R L +N ++ + E +E++ + F M + + + DN++
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEV-LYHFSHMFRDEEKPDNFT 62
Query: 192 FASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
L C + + +G +H V K + V ++LI MY CG +++A ++F+E
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS-LRPSELTFVSVMSACLC---PR 305
+ D ++++ M+ G G +A+ FR M++AS + P +T ++++SAC R
Sbjct: 123 EK--PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSR 180
Query: 306 VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYA 365
+G VH ++ GF S+ N+ + Y+ EA +F + EKD++SW+T+I+ Y
Sbjct: 181 LGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYV 240
Query: 366 QRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQ 422
Q A+L + +M G P+ T +L A++ +E H G+ T ++
Sbjct: 241 QNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVK 300
Query: 423 VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-S 481
VS AL+ Y K ++AY +F + +++++W LI+GF LNG + ++ FS +L+ +
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN 360
Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCS 541
RPD + L SC+ + L K H YV+K S +G +++ LY++CG L +
Sbjct: 361 NTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Query: 542 LRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSH 601
+VFN + KDT+ W +LI+ Y HG+G +A+ F M +KP++ TF ++LSACSH
Sbjct: 421 SKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSH 480
Query: 602 AGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
AGL+ +G RIF MVNDY P +H + ++DLLGR G LD A +
Sbjct: 481 AGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILG 540
Query: 662 ALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTG 721
L AC H N + +A L E E + Y+L+SN+Y G WE +R +K+ G
Sbjct: 541 TLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRG 600
Query: 722 VIK 724
+ K
Sbjct: 601 IKK 603
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/543 (24%), Positives = 251/543 (46%), Gaps = 44/543 (8%)
Query: 17 SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
+K L + N L +LSR +++ L+ F + + KPD ++L L AC LR +G
Sbjct: 21 TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKACGELREVNYG 79
Query: 77 NQLHAYALR-AGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTK 135
+H + + L + +V ++++ +Y ++ R+F E++ PD+ +W++ +S K
Sbjct: 80 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 136 MGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASV 195
G A E F +M + DV D + ++
Sbjct: 140 NGSPYQAVEFFRRM------------------------------VMASDVTPDRVTLITL 169
Query: 196 LSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVC 254
+S C GR +H V + GFS +S+VN+L+ Y +A +F+
Sbjct: 170 VSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK-- 227
Query: 255 DHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVH 311
D IS++ ++ G EAL+ F DM+ P+ T + V+ AC G + H
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Query: 312 AQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGR 371
A++ G E VS A + MY C +EA +F+R+ KD+VSW +IS + +
Sbjct: 288 ELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 372 SAILAY-LEMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNAL 427
+I + + + RPD +L S GF+E + H++V G +N + +L
Sbjct: 348 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 407
Query: 428 ISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLM-SELRPD 486
+ Y++ + A ++F+ ++ ++ + W +LI G+ ++G + L+ F+ ++ SE++P+
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 487 EYTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVF 545
E T LS+C+ + G +I ++ + L + ++ L + GDLD ++ +
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 546 NMM 548
M
Sbjct: 528 KRM 530
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 322 bits (824), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 298/552 (53%), Gaps = 14/552 (2%)
Query: 191 SFASVLSVCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEA 249
+ S+L VC GL + G Q+H + KSG + N LI MY C + A KVF+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 250 KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV--- 306
+ +S++ +M G G ++ +L F +M + P+E TF + + AC
Sbjct: 68 PER--NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 307 GYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQ 366
G Q+H +K GFE V N+ + MYS CG+I+EA +F R+ ++ ++SWN MI+ +
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 367 RNLGRSAILAYLEMQSVGI--RPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI--IT 419
G A+ + MQ I RPDEFT SLL +S+G I + IH F+ +G +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPS 245
Query: 420 NIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL 479
+ ++ +L+ Y K + A + F + + +I+W++LI G+ G V+ + F L
Sbjct: 246 SATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ 305
Query: 480 MSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLD 539
+ D + LS + A + LR GKQ+ +K + S+ N+++ +Y KCG +D
Sbjct: 306 ELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 540 CSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSAC 599
+ + F M KD ISW +I+ Y +HG GK++V F M I+PD+ + AVLSAC
Sbjct: 366 EAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR-HNIEPDEVCYLAVLSAC 424
Query: 600 SHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDN 659
SH+G++ +G +F ++ +G P +H +C++DLLGRAG L EA+ +I++ I+
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 660 WWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKR 719
W L S C HG++ LG+ + +LL + P+ YV++SN+Y AG W E N REL
Sbjct: 485 WQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNI 544
Query: 720 TGVIKQPGCSWI 731
G+ K+ G SW+
Sbjct: 545 KGLKKEAGMSWV 556
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 251/535 (46%), Gaps = 61/535 (11%)
Query: 59 SLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
+L + L C + G Q+H Y L++G +N ++ +Y R+ +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPL--------- 58
Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFR 178
A +VFD MP+R++ ++A+++G NG + LF
Sbjct: 59 ----------------------MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFS 96
Query: 179 EMHKLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLVTKSGFSCLVSVVNALITMYFN 235
EM + + + ++F++ L C GL LE G Q+H K GF +V V N+L+ MY
Sbjct: 97 EMGRQGIYPNEFTFSTNLKAC--GLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 154
Query: 236 CGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLASVGRVEEALIRFRDMLVASL--RPSE 291
CG + +A KVF + D IS+N M+ G G +AL F M A++ RP E
Sbjct: 155 CGRINEAEKVFRR----IVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE 210
Query: 292 LTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYTS--VSNAAITMYSSCGKIDEACMIF 346
T S++ AC + G Q+H ++SGF +S ++ + + +Y CG + A F
Sbjct: 211 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIE 403
+++EK ++SW+++I YAQ A+ + +Q + + D F S++ A +
Sbjct: 271 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLR 330
Query: 404 MVEMIHAFV--FINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLING 461
+ + A +G+ T+ V N+++ Y K + +A + F M +++I+W +I G
Sbjct: 331 QGKQMQALAVKLPSGLETS--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 388
Query: 462 FLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS- 520
+ +G + ++ F E+L + PDE LS+C+ ++ G+++ +L+ + I
Sbjct: 389 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 448
Query: 521 KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTIS-WNALISAYAQHGE---GKE 571
++ ++ L + G L + + + M K + W L+S HG+ GKE
Sbjct: 449 RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 51/442 (11%)
Query: 34 SGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPH 93
+G + +L LF ++ + P+ ++ ST L AC L G Q+H + L+ G +
Sbjct: 85 NGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVE 143
Query: 94 VANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRD 153
V N+++ +Y +K G ++ A +VF ++ DR
Sbjct: 144 VGNSLVDMY-------------------------------SKCGRINEAEKVFRRIVDRS 172
Query: 154 LPVYNAMITGCTENGYEDIGIGLFREMHKLDV--RRDNYSFASVLSVCDA-GLLEFGRQL 210
L +NAMI G GY + F M + ++ R D ++ S+L C + G++ G+Q+
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Query: 211 HSLVTKSGFSCLVS--VVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
H + +SGF C S + +L+ +Y CG + A K F++ K IS++ ++ G A
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM--ISWSSLILGYAQ 290
Query: 269 VGRVEEALIRFRDM--LVASLRPSEL-TFVSVMSACLCPRVGYQVHAQAMK--SGFEAYT 323
G EA+ F+ + L + + L + + V + R G Q+ A A+K SG E T
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE--T 348
Query: 324 SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSV 383
SV N+ + MY CG +DEA FA +Q KD++SW +I+ Y + LG+ ++ + EM
Sbjct: 349 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 408
Query: 384 GIRPDEFTFGSLLAS---SGFI-EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
I PDE + ++L++ SG I E E+ + +GI ++ ++ + R+K+
Sbjct: 409 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKE 468
Query: 440 AYQIFHNMSPR-NIITWNTLIN 460
A + M + N+ W TL++
Sbjct: 469 AKHLIDTMPIKPNVGIWQTLLS 490
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 32 SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
++ G + +A+ LF ++ + + D ++LS+ + A+ G Q+ A A++
Sbjct: 289 AQEGEFVEAMGLFKRLQELNS-QIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLE 347
Query: 92 PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKM-- 149
V N+++ +Y + ++ F+E+Q DV SWT ++ K G + +F +M
Sbjct: 348 TSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLR 407
Query: 150 --PDRDLPVYNAMITGCTENGYEDIGIGLFR---EMHKLDVRRDNYS 191
+ D Y A+++ C+ +G G LF E H + R ++Y+
Sbjct: 408 HNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 454
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
+ + + G + ++ +F ++ H ++PD L+AC++ G +L + L
Sbjct: 383 TVVITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 85 RA-GLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ-NPDVYSWTTFLSACTKMGHVDYA 142
G+K ++ L A L K + + P+V W T LS C G ++
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 501
Query: 143 CEV 145
EV
Sbjct: 502 KEV 504
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 206/606 (33%), Positives = 303/606 (50%), Gaps = 78/606 (12%)
Query: 199 CDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHIS 258
C + L + RQL +++ ++V+ Y G++ A VFE+A + D +
Sbjct: 60 CKSSELNYARQLFDEISEPDKIARTTMVSG----YCASGDITLARGVFEKAPVCMRDTVM 115
Query: 259 YNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLC----PRVGYQVHAQA 314
YN M+ G + A+ F M +P TF SV++ + Q HA A
Sbjct: 116 YNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAA 175
Query: 315 MKSGFEAYTSVSNAAITMYSSCGK----IDEACMIFARLQEKDIVSW------------- 357
+KSG TSVSNA +++YS C + A +F + EKD SW
Sbjct: 176 LKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 358 -------------------NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-- 396
N MIS Y R + A+ M S GI DEFT+ S++
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 397 -ASSGFIEMVEMIHAFV---------FINGIIT---------------------NIQVSN 425
A++G +++ + +HA+V F N +++ ++ N
Sbjct: 296 CATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWN 355
Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
AL+S Y + I +A IF M +NI++W +I+G NGF +GL+ FS + P
Sbjct: 356 ALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEP 415
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
+Y S A+ SCA + + +G+Q H +LK S +S GNA+IT+YAKCG ++ + +VF
Sbjct: 416 CDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVF 475
Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
M D++SWNALI+A QHG G EAV ++ M G I+PD+ T VL+ACSHAGLV
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLV 534
Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
D G + FDSM Y P DH + ++DLL R+G +AE VI S + ++ W AL S
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
C HGN+ LG I A L + Y+LLSN++AA G WEE A +R+L++ GV K+
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKE 654
Query: 726 PGCSWI 731
CSWI
Sbjct: 655 VACSWI 660
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 171/670 (25%), Positives = 282/670 (42%), Gaps = 126/670 (18%)
Query: 61 STTLAACANLRNAAF--GNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEI 118
+ L C LR + +H + G + H+ N ++ +Y + +L +++F EI
Sbjct: 16 AANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEI 75
Query: 119 QNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD--RDLPVYNAMITGCTENGYEDIGIGL 176
PD + TT +S G + A VF+K P RD +YNAMITG + N I L
Sbjct: 76 SEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINL 135
Query: 177 FREMHKLDVRRDNYSFASVLSVCDAGLLEFGR------QLHSLVTKSGFSCLVSVVNALI 230
F +M + DN++FASVL AGL Q H+ KSG + SV NAL+
Sbjct: 136 FCKMKHEGFKPDNFTFASVL----AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 231 TMYFNCGN----VVDACKVFEE------------AKGYVCDH------------------ 256
++Y C + + A KVF+E GYV +
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQ 313
++YN M+ G + G +EAL R M+ + + E T+ SV+ AC ++G QVHA
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 314 AMKSGFEAYT-SVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY-------- 364
++ E ++ N+ +++Y CGK DEA IF ++ KD+VSWN ++S Y
Sbjct: 312 VLRR--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGE 369
Query: 365 -----------------------AQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGF 401
A+ G + + M+ G P ++ F + S
Sbjct: 370 AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAV 429
Query: 402 IEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTL 458
+ + HA + G +++ NALI+ YAK +++A Q+F M + ++WN L
Sbjct: 430 LGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNAL 489
Query: 459 INGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNL 518
I +G + + + E+L +RPD TL L++C+ + G++
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF-------- 541
Query: 519 ISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKA 578
++M T+Y I + LI + G+ +A S ++
Sbjct: 542 -------DSMETVY---------------RIPPGADHYARLIDLLCRSGKFSDAESVIES 579
Query: 579 MQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCML-DLLGR 637
+ KP + A+LS C G ++ G D + +G IP D +L ++
Sbjct: 580 LP----FKPTAEIWEALLSGCRVHGNMELGIIAADKL---FGLIPEHDGTYMLLSNMHAA 632
Query: 638 AGYLDEAERV 647
G +E RV
Sbjct: 633 TGQWEEVARV 642
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 145/282 (51%), Gaps = 5/282 (1%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L+ N ++ G YQ+AL + ++ SS ++ D ++ + + ACA G Q+H
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
AY LR ++ H N+++SLY + +F ++ D+ SW LS GH+
Sbjct: 310 AYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD 200
A +F +M ++++ + MI+G ENG+ + G+ LF M + +Y+F+ + C
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 201 A-GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
G G+Q H+ + K GF +S NALITMY CG V +A +VF D +S+
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CLDSVSW 486
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
N ++ L G EA+ + +ML +RP +T ++V++AC
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 115/277 (41%), Gaps = 47/277 (16%)
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
+ Y ++ L R +SL+ + +HG ++ + + N +I +Y K +L+ + ++F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 546 NMMIE---------------------------------KDTISWNALISAYAQHGEGKEA 572
+ + E +DT+ +NA+I+ ++ + +G A
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 573 VSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD----SMVNDYGFIPA-EDH 627
++ F M+ G KPD TF +VL+ A + DD + ++ + G+I + +
Sbjct: 133 INLFCKMKHEG-FKPDNFTFASVLAGL--ALVADDEKQCVQFHAAALKSGAGYITSVSNA 189
Query: 628 LSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLERE 687
L + + L + R + + ++ +W + + +G LG LLE
Sbjct: 190 LVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGE----ELLEGM 245
Query: 688 QD--KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGV 722
D K Y + + Y G ++EA + + +G+
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGI 282
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 336/628 (53%), Gaps = 16/628 (2%)
Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
R+ + D T+ L + G++ A +VFD MP RDL ++ +++ C ENG
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK 185
Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
+ +F+ M V D + SV+ C + G L R +H +T+ F ++ N+L+T
Sbjct: 186 ALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLT 245
Query: 232 MYFNCGNVVDACKVFEE-AKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
MY CG+++ + ++FE+ AK + +S+ M+ E+AL F +M+ + + P+
Sbjct: 246 MYSKCGDLLSSERIFEKIAKK---NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 291 ELTFVSVMSACLCP---RVGYQVHAQAMKSGFEA-YTSVSNAAITMYSSCGKIDEACMIF 346
+T SV+S+C R G VH A++ + Y S+S A + +Y+ CGK+ + +
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL 362
Query: 347 ARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIE 403
+ +++IV+WN++IS YA R + A+ + +M + I+PD FT S +++ +G +
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 404 MVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
+ + IH V I +++ V N+LI Y+K+ + A +F+ + R+++TWN+++ GF
Sbjct: 423 LGKQIHGHV-IRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
NG V+ + F + S L +E T + +C+ I SL GK +H ++ + L +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLF 540
Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
A+I +YAKCGDL+ + VF M + +SW+++I+AY HG A+S F M + G
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG 600
Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
KP++ F VLSAC H+G V++G F+ M +G P +H +C +DLL R+G L E
Sbjct: 601 -TKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA 703
A R I A + W +L + C H + + + I L + D Y LLSNIYA
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAE 718
Query: 704 AGLWEEAANIRELLKRTGVIKQPGCSWI 731
G WEE +R +K + + K PG S I
Sbjct: 719 EGEWEEFRRLRSAMKSSNLKKVPGYSAI 746
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/611 (27%), Positives = 300/611 (49%), Gaps = 27/611 (4%)
Query: 127 TTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVR 186
T + + MG D + VF+ P D +Y +I D I L+ + +
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97
Query: 187 RDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACK 244
+ F SVL C L G ++H + K G + +L+ MY GN+ DA K
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 245 VFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL-- 302
VF+ V D ++++ ++ G V +AL F+ M+ + P +T +SV+ C
Sbjct: 158 VFDGMP--VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAEL 215
Query: 303 -CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMI 361
C R+ VH Q + F+ ++ N+ +TMYS CG + + IF ++ +K+ VSW MI
Sbjct: 216 GCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMI 275
Query: 362 STYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGII 418
S+Y + A+ ++ EM GI P+ T S+L+S G I ++ + +H F +
Sbjct: 276 SSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELD 335
Query: 419 TNIQ-VSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
N + +S AL+ YA+ ++ + +S RNI+ WN+LI+ + G +Q L F +
Sbjct: 336 PNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 478 LLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGD 537
++ ++PD +TL+ ++S+C + GKQIHG+V++ + +S + N++I +Y+K G
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGS 454
Query: 538 LDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLS 597
+D + VFN + + ++WN+++ ++Q+G EA+S F M ++ ++ TF AV+
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH-SYLEMNEVTFLAVIQ 513
Query: 598 ACSHAGLVDDGTRIFDSMVNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERVINSQHIQ 654
ACS G ++ G + ++ I L + ++D+ + G L+ AE V + +
Sbjct: 514 ACSSIGSLEKGKWVHHKLI-----ISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 655 ARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAA---AGLWEEAA 711
+ ++ +A HG R+G I+ E V+ N+ +A +G EE
Sbjct: 569 SIVSW-SSMINAYGMHG--RIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Query: 712 NIRELLKRTGV 722
L+K GV
Sbjct: 626 YYFNLMKSFGV 636
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 260/579 (44%), Gaps = 58/579 (10%)
Query: 33 RSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP 92
+G AL +F + ++PD ++ + + CA L +H R
Sbjct: 179 ENGEVVKALRMF-KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 93 HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDR 152
+ N++L++Y DL+S +R+F +I + SWT
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWT------------------------- 272
Query: 153 DLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLH 211
AMI+ + + + F EM K + + + SVLS C GL+ G+ +H
Sbjct: 273 ------AMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 212 SLVTKSGFSC-LVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH--ISYNVMMDGLAS 268
+ S+ AL+ +Y CG + D V V D +++N ++ A
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR----VVSDRNIVAWNSLISLYAH 382
Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC----LCPRVGYQVHAQAMKSGFEAYTS 324
G V +AL FR M+ ++P T S +SAC L P +G Q+H +++ +
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP-LGKQIHGHVIRTDV-SDEF 440
Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
V N+ I MYS G +D A +F +++ + +V+WN+M+ ++Q AI + M
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 385 IRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAY 441
+ +E TF +++ +S G +E + +H + I+G + ++ ALI YAK + A
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAE 559
Query: 442 QIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARIS 501
+F MS R+I++W+++IN + ++G + F++++ S +P+E LS+C
Sbjct: 560 TVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSG 619
Query: 502 SLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDCSLRVFNMM-IEKDTISWNAL 559
S+ GK ++K+ +S S A I L ++ GDL + R M D W +L
Sbjct: 620 SVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Query: 560 ISAYAQHGEGKEAVSCFKAMQ-DVGRIKPDQATFTAVLS 597
++ H + + KA++ D+ I D + +LS
Sbjct: 679 VNGCRIH----QKMDIIKAIKNDLSDIVTDDTGYYTLLS 713
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 211/444 (47%), Gaps = 26/444 (5%)
Query: 294 FVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVS-NAAITMYSSCGKIDEACMIFARLQEK 352
++ + +C R+ Q+HA + +G + I Y+ G D + ++F
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 353 DIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL-ASSGFIEMVEM---I 408
D + +I +L +AI Y + S + +F F S+L A +G E + + +
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKV 123
Query: 409 HAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFP 468
H + G+ + + +L+ Y + + A ++F M R+++ W+TL++ L NG
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 469 VQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAM 528
V+ L+ F ++ + PD T+ + CA + LR + +HG + + +L N++
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 529 ITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPD 588
+T+Y+KCGDL S R+F + +K+ +SW A+IS+Y + ++A+ F M G I+P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-IEPN 302
Query: 589 QATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLS-CMLDLLGRAGYLDEAE-- 645
T +VLS+C GL+ +G + V P + LS +++L G L + E
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRE-LDPNYESLSLALVELYAECGKLSDCETV 361
Query: 646 -RVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLER----EQDKPSVYVLLSNI 700
RV++ ++I A W +L S A G +I L L R ++ KP + L S+I
Sbjct: 362 LRVVSDRNIVA----WNSLISLYAHR-----GMVIQALGLFRQMVTQRIKPDAFTLASSI 412
Query: 701 YAA--AGLWEEAANIRELLKRTGV 722
A AGL I + RT V
Sbjct: 413 SACENAGLVPLGKQIHGHVIRTDV 436
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 206/443 (46%), Gaps = 45/443 (10%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
+++ +R + AL F ++ S ++P++ +L + L++C + G +H +A+R
Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 88 LKA-YPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVF 146
L Y ++ ++ LY L + V + + ++ +W + +S G V A
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQA---- 389
Query: 147 DKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLE 205
+GLFR+M ++ D ++ AS +S C+ AGL+
Sbjct: 390 ---------------------------LGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 206 FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDG 265
G+Q+H V ++ S V N+LI MY G+V A VF + K +++N M+ G
Sbjct: 423 LGKQIHGHVIRTDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSV--VTWNSMLCG 479
Query: 266 LASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAY 322
+ G EA+ F M + L +E+TF++V+ AC G VH + + SG +
Sbjct: 480 FSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL 539
Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQS 382
+ A I MY+ CG ++ A +F + + IVSW++MI+ Y SAI + +M
Sbjct: 540 FT-DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 598
Query: 383 VGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQ 439
G +P+E F ++L++ SG +E + + G+ N + I +++ +K+
Sbjct: 599 SGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 440 AYQIFHNMS-PRNIITWNTLING 461
AY+ M + W +L+NG
Sbjct: 659 AYRTIKEMPFLADASVWGSLVNG 681
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 320 bits (819), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 337/642 (52%), Gaps = 36/642 (5%)
Query: 111 VKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMP-DRDLPV-YNAMITGCTENG 168
+KR + + + + T ++C + V+ A VFD++P R P+ ++ MI N
Sbjct: 26 LKRSLTLSSSTVLVNLTRLYASCNE---VELARHVFDEIPHPRINPIAWDLMIRAYASND 82
Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL--LEFGRQLHSLVTKSGFSCLVSVV 226
+ + + L+ +M VR Y++ VL C AGL ++ G+ +HS V S F+ + V
Sbjct: 83 FAEKALDLYYKMLNSGVRPTKYTYPFVLKAC-AGLRAIDDGKLIHSHVNCSDFATDMYVC 141
Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML-VA 285
AL+ Y CG + A KVF+E D +++N M+ G + + + + F DM +
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKR--DMVAWNAMISGFSLHCCLTDVIGLFLDMRRID 199
Query: 286 SLRPSELTFVSVMSA---CLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEA 342
L P+ T V + A R G VH + GF V + +Y+
Sbjct: 200 GLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK-----SK 254
Query: 343 CMIFARLQ-----EKDIVSWNTMISTYAQRNLGRSAILAYLEM----QSVGIRPDEFTFG 393
C+I+AR +K+ V+W+ MI Y + + + A + +M + P G
Sbjct: 255 CIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIG 312
Query: 394 SLL---ASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
+L A G + +H + G I ++ V N +IS YAK + A++ F + +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 451 NIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIH 510
++I++N+LI G ++N P + + F E+ S +RPD TL L++C+ +++L HG H
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 511 GYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGK 570
GY + + S+ NA++ +Y KCG LD + RVF+ M ++D +SWN ++ + HG GK
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV-NDYGFIPAEDHLS 629
EA+S F +MQ+ G + PD+ T A+LSACSH+GLVD+G ++F+SM D+ IP DH +
Sbjct: 493 EALSLFNSMQETG-VNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYN 551
Query: 630 CMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQD 689
CM DLL RAGYLDEA +N + L SAC + N LG ++ + +
Sbjct: 552 CMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGET 611
Query: 690 KPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
S+ VLLSN Y+AA WE+AA IR + K+ G++K PG SW+
Sbjct: 612 TESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/591 (25%), Positives = 261/591 (44%), Gaps = 58/591 (9%)
Query: 38 QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
+ AL L+ ++ +S ++P Y+ L ACA LR G +H++ + +V
Sbjct: 85 EKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTA 143
Query: 98 ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
++ Y +L +VF E MP RD+ +
Sbjct: 144 LVDFYAKCGELEMAIKVFDE-------------------------------MPKRDMVAW 172
Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYS--FASVLSVCDAGLLEFGRQLHSLVT 215
NAMI+G + + IGLF +M ++D N S ++ AG L G+ +H T
Sbjct: 173 NAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCT 232
Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
+ GFS + V ++ +Y ++ A +VF+ + + ++++ M+ G ++EA
Sbjct: 233 RMGFSNDLVVKTGILDVYAKSKCIIYARRVFD--LDFKKNEVTWSAMIGGYVENEMIKEA 290
Query: 276 LIRFRDML----VASLRPSELTFVSVMSACLCPRV-----GYQVHAQAMKSGFEAYTSVS 326
F ML VA + P + + + C R G VH A+K+GF +V
Sbjct: 291 GEVFFQMLVNDNVAMVTPVAIGLILMG----CARFGDLSGGRCVHCYAVKAGFILDLTVQ 346
Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
N I+ Y+ G + +A F+ + KD++S+N++I+ + + EM++ GIR
Sbjct: 347 NTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIR 406
Query: 387 PDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
PD T +L + + + H + ++G N + NAL+ Y K ++ A ++
Sbjct: 407 PDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRV 466
Query: 444 FHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSL 503
F M R+I++WNT++ GF ++G + L F+ + + + PDE TL LS+C+ +
Sbjct: 467 FDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLV 526
Query: 504 RHGKQIHGYVLKN--NLISKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALI 560
GKQ+ + + N+I ++ N M L A+ G LD + N M E D L+
Sbjct: 527 DEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLL 586
Query: 561 SAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
SA + + K MQ +G + SA A +D RI
Sbjct: 587 SACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSA---AERWEDAARI 634
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 191/440 (43%), Gaps = 42/440 (9%)
Query: 18 KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
K ++ N ++ S D + LF+ + L P++ ++ A G
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 78 QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
+H Y R G V IL +Y ++ ++ +RVF + +W+ + +
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENE 285
Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
+ A EVF +M D AM+T + IGL ++
Sbjct: 286 MIKEAGEVFFQMLVND---NVAMVT--------PVAIGLI-----------------LMG 317
Query: 198 VCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI 257
G L GR +H K+GF ++V N +I+ Y G++ DA + F E + D I
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG--LKDVI 375
Query: 258 SYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQA 314
SYN ++ G R EE+ F +M + +RP T + V++AC G H
Sbjct: 376 SYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYC 435
Query: 315 MKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAI 374
+ G+ TS+ NA + MY+ CGK+D A +F + ++DIVSWNTM+ + LG+ A+
Sbjct: 436 VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL 495
Query: 375 LAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIHAFVFIN----GIITNIQVSNAL 427
+ MQ G+ PDE T ++L++ SG ++ E F ++ +I I N +
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVD--EGKQLFNSMSRGDFNVIPRIDHYNCM 553
Query: 428 ISAYAKNERIKQAYQIFHNM 447
A+ + +AY + M
Sbjct: 554 TDLLARAGYLDEAYDFVNKM 573
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 319 bits (817), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 270/525 (51%), Gaps = 36/525 (6%)
Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
R +HS + C S+ L+ Y + +V A KVF+E + I NVM+
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSYV 116
Query: 268 SVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFEAYTS 324
+ G E + F M ++RP TF V+ AC C +G ++H A K G +
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 325 VSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVG 384
V N ++MY CG + EA ++ + +D+VSWN+++ YAQ A+ EM+SV
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 385 IRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
I D T SLL + ++N N + Y K+ +F
Sbjct: 237 ISHDAGTMASLLPA-------------------VSNTTTENVM---YVKD--------MF 266
Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLR 504
M +++++WN +I ++ N PV+ ++ +S + PD +++ L +C S+L
Sbjct: 267 FKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALS 326
Query: 505 HGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYA 564
GK+IHGY+ + LI + L NA+I +YAKCG L+ + VF M +D +SW A+ISAY
Sbjct: 327 LGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 565 QHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPA 624
G G +AV+ F +QD G + PD F L+ACSHAGL+++G F M + Y P
Sbjct: 387 FSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR 445
Query: 625 EDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLL 684
+HL+CM+DLLGRAG + EA R I ++ W AL AC H + +G + A L
Sbjct: 446 LEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLF 505
Query: 685 EREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCS 729
+ ++ YVLLSNIYA AG WEE NIR ++K G+ K PG S
Sbjct: 506 QLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 244/526 (46%), Gaps = 43/526 (8%)
Query: 98 ILSLYKNARDLVSV-KRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPV 156
+L Y + R L +V R+ E + + A + V A +VFD++P+R++ +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCD-AGLLEFGRQLHSLVT 215
N MI NG+ G+ +F M +VR D+Y+F VL C +G + GR++H T
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167
Query: 216 KSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEA 275
K G S + V N L++MY CG + +A V +E D +S+N ++ G A R ++A
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR--DVVSWNSLVVGYAQNQRFDDA 225
Query: 276 LIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSS 335
L R+M + T S++ A + T+ N MY
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAV-------------------SNTTTEN---VMYVK 263
Query: 336 CGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSL 395
+F ++ +K +VSWN MI Y + + A+ Y M++ G PD + S+
Sbjct: 264 --------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 396 LASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNI 452
L + G + + + IH ++ +I N+ + NALI YAK +++A +F NM R++
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 453 ITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGY 512
++W +I+ + +G + FS+L S L PD L++C+ L G+
Sbjct: 376 VSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKL 435
Query: 513 VLKNNLIS-KMSLGNAMITLYAKCGDLDCSLR-VFNMMIEKDTISWNALISAYAQHGEGK 570
+ + I+ ++ M+ L + G + + R + +M +E + W AL+ A H +
Sbjct: 436 MTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 571 EAVSCFKAMQDVGRIKPDQATFTAVLSAC-SHAGLVDDGTRIFDSM 615
+ A + ++ P+Q+ + +LS + AG ++ T I + M
Sbjct: 496 IGLL---AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 176/361 (48%), Gaps = 18/361 (4%)
Query: 372 SAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAY 431
S+ L LE+ + F G +L + I + +H+ + + + N + L+ AY
Sbjct: 25 SSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAY 84
Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLS 491
A + + A ++F + RN+I N +I ++ NGF +G++ F + +RPD YT
Sbjct: 85 ASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFP 144
Query: 492 VALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEK 551
L +C+ ++ G++IHG K L S + +GN ++++Y KCG L + V + M +
Sbjct: 145 CVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRR 204
Query: 552 DTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRI 611
D +SWN+L+ YAQ+ +A+ + M+ V +I D T ++L A S+ T
Sbjct: 205 DVVSWNSLVVGYAQNQRFDDALEVCREMESV-KISHDAGTMASLLPAVSN-------TTT 256
Query: 612 FDSM-VNDYGFIPAEDHL---SCMLDLLGRAGYLDEAERV---INSQHIQARSDNWWALF 664
+ M V D F + L + M+ + + EA + + + + + + ++
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 665 SACAAHGNLRLGRIIAGLLLEREQDKPSVYV--LLSNIYAAAGLWEEAANIRELLKRTGV 722
AC L LG+ I G +ER++ P++ + L ++YA G E+A ++ E +K V
Sbjct: 317 PACGDTSALSLGKKIHG-YIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDV 375
Query: 723 I 723
+
Sbjct: 376 V 376
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 167/416 (40%), Gaps = 77/416 (18%)
Query: 24 LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
+N+ + + +G Y + + +F + + ++PD Y+ L AC+ G ++H A
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCN-VRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 84 LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTF-------------L 130
+ GL + V N ++S+Y L + V E+ DV SW + L
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 131 SACTKMGHVD------------------------YACEVFDKMPDRDLPVYNAMITGCTE 166
C +M V Y ++F KM + L +N MI +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMK 286
Query: 167 NGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSV 225
N + L+ M D S SVL C D L G+++H + + + +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 226 VNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA 285
NALI MY CG + A VFE K D +S+ M+ GR +A+ F + +
Sbjct: 347 ENALIDMYAKCGCLEKARDVFENMKSR--DVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 286 SLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDE-ACM 344
L P + FV+ ++AC HA ++ G + +++ Y +++ ACM
Sbjct: 405 GLVPDSIAFVTTLAAC--------SHAGLLEEGRSCFKLMTDH----YKITPRLEHLACM 452
Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAIL--AYLEMQSVGIRPDEFTFGSLLAS 398
+ D+ LGR+ + AY +Q + + P+E +G+LL +
Sbjct: 453 V-------DL--------------LGRAGKVKEAYRFIQDMSMEPNERVWGALLGA 487
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 113/285 (39%), Gaps = 68/285 (23%)
Query: 18 KELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGN 77
K+ L+ N+ + ++ +A+ L+ ++ + +PD S+++ L AC + + G
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGK 329
Query: 78 QLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG 137
++H Y R L + N ++ +Y L + VF +++ DV SWT +SA
Sbjct: 330 KIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA----- 384
Query: 138 HVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS 197
Y GC + LF ++ + D+ +F + L+
Sbjct: 385 -------------------YGFSGRGCD-------AVALFSKLQDSGLVPDSIAFVTTLA 418
Query: 198 VCD-AGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDH 256
C AGLLE GR L+T D K+ + C
Sbjct: 419 ACSHAGLLEEGRSCFKLMT-------------------------DHYKITPRLEHLAC-- 451
Query: 257 ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
M+D L G+V+EA +DM S+ P+E + +++ AC
Sbjct: 452 -----MVDLLGRAGKVKEAYRFIQDM---SMEPNERVWGALLGAC 488
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 315 bits (808), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 298/533 (55%), Gaps = 14/533 (2%)
Query: 210 LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASV 269
+H +GF + + + LI +Y G+V A K+F+ D +S+ M+ +
Sbjct: 35 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR--DVVSWTAMISRFSRC 92
Query: 270 GRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVS 326
G +AL+ F++M ++ ++ T+ SV+ +C C + G Q+H K V
Sbjct: 93 GYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVR 152
Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
+A +++Y+ CGK++EA + F ++E+D+VSWN MI Y ++ + M + G +
Sbjct: 153 SALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKK 212
Query: 387 PDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQI 443
PD FTFGSLL +S + E+V +H G + + +L++AY K + A+++
Sbjct: 213 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 272
Query: 444 FHNMSPRNIITWNTLINGF-LLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISS 502
R++++ LI GF N F +++ + + DE +S L C I+S
Sbjct: 273 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 332
Query: 503 LRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALIS 561
+ G+QIHG+ LK++ I ++LGN++I +YAK G+++ ++ F M EKD SW +LI+
Sbjct: 333 VTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIA 392
Query: 562 AYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGF 621
Y +HG ++A+ + M+ RIKP+ TF ++LSACSH G + G +I+D+M+N +G
Sbjct: 393 GYGRHGNFEKAIDLYNRMEH-ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGI 451
Query: 622 IPAEDHLSCMLDLLGRAGYLDEAERVINSQH--IQARSDNWWALFSACAAHGNLRLGRII 679
E+HLSC++D+L R+GYL+EA +I S+ + S W A AC HGN++L ++
Sbjct: 452 EAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVA 511
Query: 680 AGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVI-KQPGCSWI 731
A LL E KP Y+ L+++YAA G W+ A N R+L+K +G K PG S +
Sbjct: 512 ATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 564
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/446 (26%), Positives = 228/446 (51%), Gaps = 15/446 (3%)
Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
K G V +A ++FD++ RD+ + AMI+ + GY + LF+EMH+ DV+ + +++ S
Sbjct: 60 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 119
Query: 195 VLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
VL C D G L+ G Q+H V K + + V +AL+++Y CG + +A F+ K
Sbjct: 120 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKER- 178
Query: 254 CDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQV 310
D +S+N M+DG + + + F+ ML +P TF S++ A + C + ++
Sbjct: 179 -DLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSEL 237
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
H A+K GF +++ + + Y CG + A + +++D++S +I+ ++Q+N
Sbjct: 238 HGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNC 297
Query: 371 RS-AILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFINGIIT-NIQVSN 425
S A + +M + + DE S+L I V + IH F + I ++ + N
Sbjct: 298 TSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN 357
Query: 426 ALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP 485
+LI YAK+ I+ A F M +++ +W +LI G+ +G + + ++ + ++P
Sbjct: 358 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 417
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVL-KNNLISKMSLGNAMITLYAKCGDLDCS--- 541
++ T LS+C+ G +I+ ++ K+ + ++ + +I + A+ G L+ +
Sbjct: 418 NDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYAL 477
Query: 542 LRVFNMMIEKDTISWNALISAYAQHG 567
+R ++ + +W A + A +HG
Sbjct: 478 IRSKEGIVSLSSSTWGAFLDACRRHG 503
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 219/477 (45%), Gaps = 46/477 (9%)
Query: 17 SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
SK ++ ++ SR G++ DAL LF ++H +K + ++ + L +C +L G
Sbjct: 75 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKEG 133
Query: 77 NQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKM 136
Q+H + V + +LSLY + C KM
Sbjct: 134 MQIHGSVEKGNCAGNLIVRSALLSLY----------------------------ARCGKM 165
Query: 137 GHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVL 196
+ A FD M +RDL +NAMI G T N D LF+ M + D ++F S+L
Sbjct: 166 ---EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 222
Query: 197 SVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCD 255
LE +LH L K GF +++ +L+ Y CG++ +A K+ E K D
Sbjct: 223 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKR--D 280
Query: 256 HISYNVMMDGLASVGR-VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVH 311
+S ++ G + +A F+DM+ + E+ S++ C +G Q+H
Sbjct: 281 LLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIH 340
Query: 312 AQAMKSGFEAY-TSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
A+KS + ++ N+ I MY+ G+I++A + F ++EKD+ SW ++I+ Y +
Sbjct: 341 GFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNF 400
Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLAS---SGFIEMVEMIH-AFVFINGIITNIQVSNA 426
AI Y M+ I+P++ TF SLL++ +G E+ I+ + +GI + +
Sbjct: 401 EKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSC 460
Query: 427 LISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSEL 483
+I A++ +++AY + S I++ ++ G L+ G S++ ++L
Sbjct: 461 IIDMLARSGYLEEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQL 515
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Query: 407 MIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNG 466
+IH NG +N+Q+ + LI Y K +K A ++F +S R++++W +I+ F G
Sbjct: 34 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 93
Query: 467 FPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGN 526
+ L F E+ +++ +++T L SC + L+ G QIHG V K N + + +
Sbjct: 94 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 153
Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
A+++LYA+CG ++ + F+ M E+D +SWNA+I Y + + S F+ M G+ K
Sbjct: 154 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-K 212
Query: 587 PDQATFTAVLSA 598
PD TF ++L A
Sbjct: 213 PDCFTFGSLLRA 224
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 315 bits (806), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 224/785 (28%), Positives = 380/785 (48%), Gaps = 117/785 (14%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRA 86
+++L ++G ++AL L ++ + ++ P+IY L C R+ + G Q+HA L+
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYG--EILQGCVYERDLSTGKQIHARILKN 99
Query: 87 G-LKAYPHVANTILSLYKNARDLVSVKRV-FSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
G A T L ++ D + + V FS+++ +V+SW + ++G CE
Sbjct: 100 GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIG----LCE 155
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GL 203
+ G F EM + ++ DN+ +V C A
Sbjct: 156 --------------GALMG-------------FVEMLENEIFPDNFVVPNVCKACGALKW 188
Query: 204 LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMM 263
FGR +H V KSG V V ++L MY CG + DA KVF+E + +++N +M
Sbjct: 189 SRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR--NAVAWNALM 246
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFE 320
G G+ EEA+ F DM + P+ +T + +SA G Q HA A+ +G E
Sbjct: 247 VGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME 306
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
+ + + Y G I+ A M+F R+ EKD+V+WN +IS Y Q+ L AI M
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLM 366
Query: 381 QSVGIRPDEFTFGSLLASSGFIEMVEM---------IHAF-------------------- 411
+ ++ D T +L++++ E +++ H+F
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 412 -----VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMS----PRNIITWN------ 456
VF + + ++ + N L++AYA++ +A ++F+ M P N+ITWN
Sbjct: 427 VDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSL 486
Query: 457 -----------------------------TLINGFLLNGFPVQGLQHFSELLMSELRPDE 487
T++NG + NG + + ++ S LRP+
Sbjct: 487 LRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 488 YTLSVALSSCARISSLRHGKQIHGYVLKN-NLISKMSLGNAMITLYAKCGDLDCSLRVFN 546
++++VALS+CA ++SL G+ IHGY+++N S +S+ +++ +YAKCGD++ + +VF
Sbjct: 547 FSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFG 606
Query: 547 MMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVD 606
+ + NA+ISAYA +G KEA++ +++++ VG +KPD T T VLSAC+HAG ++
Sbjct: 607 SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG-LKPDNITITNVLSACNHAGDIN 665
Query: 607 DGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSA 666
IF +V+ P +H M+DLL AG ++A R+I + + +L ++
Sbjct: 666 QAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVAS 725
Query: 667 CAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQP 726
C L ++ LLE E + YV +SN YA G W+E +RE++K G+ K+P
Sbjct: 726 CNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKP 785
Query: 727 GCSWI 731
GCSWI
Sbjct: 786 GCSWI 790
Score = 206 bits (523), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/565 (26%), Positives = 274/565 (48%), Gaps = 22/565 (3%)
Query: 157 YNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL-LEFGRQLHSLVT 215
Y ++ +NG + L EM ++R + +L C L G+Q+H+ +
Sbjct: 38 YFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARIL 97
Query: 216 KSG--FSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDGLASVGR 271
K+G ++ + L+ Y C DA ++ E +K V + S+ ++ +G
Sbjct: 98 KNGDFYARNEYIETKLVIFYAKC----DALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGL 153
Query: 272 VEEALIRFRDMLVASLRPSELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNA 328
E AL+ F +ML + P +V AC R G VH +KSG E V+++
Sbjct: 154 CEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASS 213
Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
MY CG +D+A +F + +++ V+WN ++ Y Q AI + +M+ G+ P
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 389 EFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
T + L++S G +E + HA +NG+ + + +L++ Y K I+ A +F
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
M ++++TWN +I+G++ G + + + +L+ D TL+ +S+ AR +L+
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
GK++ Y ++++ S + L + ++ +YAKCG + + +VF+ +EKD I WN L++AYA+
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453
Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAE 625
G EA+ F MQ G + P+ T+ ++ + G VD+ +F M G IP
Sbjct: 454 SGLSGEALRLFYGMQLEG-VPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNL 511
Query: 626 DHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWAL---FSACAAHGNLRLGRIIAGL 682
+ M++ + + G +EA + N +++ SACA +L +GR I G
Sbjct: 512 ISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGY 571
Query: 683 LLEREQDKP--SVYVLLSNIYAAAG 705
++ Q S+ L ++YA G
Sbjct: 572 IIRNLQHSSLVSIETSLVDMYAKCG 596
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 52/342 (15%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N+ ++ + G +DA+++ Q+ KLK D +L+T ++A A N G ++ Y +
Sbjct: 344 NLIISGYVQQGLVEDAIYM-CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCI 402
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSA------------ 132
R ++ +A+T++ +Y +V K+VF D+ W T L+A
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 133 -----------------------CTKMGHVDYACEVFDKMPDR----DLPVYNAMITGCT 165
+ G VD A ++F +M +L + M+ G
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMV 522
Query: 166 ENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS-GFSCLV 223
+NG + I R+M + +R + +S LS C L GR +H + ++ S LV
Sbjct: 523 QNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLV 582
Query: 224 SVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDML 283
S+ +L+ MY CG++ A KVF +K Y +S N M+ A G ++EA+ +R +
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVF-GSKLYSELPLS-NAMISAYALYGNLKEAIALYRSLE 640
Query: 284 VASLRPSELTFVSVMSACLCPRVGYQVHAQAMKSGFEAYTSV 325
L+P +T +V+SAC HA + E +T +
Sbjct: 641 GVGLKPDNITITNVLSAC--------NHAGDINQAIEIFTDI 674
>sp|Q9SVH0|PP329_ARATH Pentatricopeptide repeat-containing protein At4g20770
OS=Arabidopsis thaliana GN=PCMP-E35 PE=3 SV=2
Length = 774
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 209/725 (28%), Positives = 358/725 (49%), Gaps = 89/725 (12%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N ++ L R G + AL ++ ++ L P ++L++ L+AC+ + + FG + H A+
Sbjct: 107 NNMISVLVRKGFEEKALVVYKRMVCDGFL-PSRFTLASVLSACSKVLDGVFGMRCHGVAV 165
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGH-VDYAC 143
+ GL V N +LS+Y K G VDY
Sbjct: 166 KTGLDKNIFVGNALLSMY-------------------------------AKCGFIVDYGV 194
Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSV----- 198
VF+ + + Y A+I G + +FR M + V+ D+ +++LS+
Sbjct: 195 RVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPRE 254
Query: 199 -CDAGLL----EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYV 253
CD+ E G+Q+H L + GF + + N+L+ +Y ++ A +F E
Sbjct: 255 GCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEV- 313
Query: 254 CDHISYNVMMDGLASVGRVE---EALIRFRDMLVASLRPSELTFVSVMSACLCPRVGYQV 310
+ +S+N+M+ G R + E L R RD + +P+E+T +SV+ AC
Sbjct: 314 -NVVSWNIMIVGFGQEYRSDKSVEFLTRMRD---SGFQPNEVTCISVLGACF-------- 361
Query: 311 HAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLG 370
G ++ IF+ + + + +WN M+S Y+
Sbjct: 362 ------------------------RSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHY 397
Query: 371 RSAILAYLEMQSVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNAL 427
AI + +MQ ++PD+ T +L+S F+E + IH V I N + + L
Sbjct: 398 EEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 428 ISAYAKNERIKQAYQIFHN-MSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSE-LRP 485
I+ Y++ E+++ + IF + ++ +I WN++I+GF N + L F + + L P
Sbjct: 458 IAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCP 517
Query: 486 DEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVF 545
+E + + LSSC+R+ SL HG+Q HG V+K+ +S + A+ +Y KCG++D + + F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 546 NMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLV 605
+ ++ K+T+ WN +I Y +G G EAV ++ M G KPD TF +VL+ACSH+GLV
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE-KPDGITFVSVLTACSHSGLV 636
Query: 606 DDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFS 665
+ G I SM +G P DH C++D LGRAG L++AE++ + ++ S W L S
Sbjct: 637 ETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLS 696
Query: 666 ACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQ 725
+C HG++ L R +A L+ + + YVLLSN Y++ W+++A ++ L+ + V K
Sbjct: 697 SCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT 756
Query: 726 PGCSW 730
PG SW
Sbjct: 757 PGQSW 761
Score = 249 bits (637), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 166/607 (27%), Positives = 296/607 (48%), Gaps = 52/607 (8%)
Query: 60 LSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQ 119
L++ L + R G +H + +R G+K+ ++ N +L LY D ++VF E+
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 120 NPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFRE 179
DVYSW FL+ K+G + ACEVFD MP+RD+ +N MI+ G+E+ + +++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 180 MHKLDVRRDNYSFASVLSVCDAGLLE-FGRQLHSLVTKSGFSCLVSVVNALITMYFNCGN 238
M ++ ASVLS C L FG + H + K+G + V NAL++MY CG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 239 VVD-ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
+VD +VFE + +SY ++ GLA +V EA+ FR M ++ + ++
Sbjct: 189 IVDYGVRVFESLSQP--NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNI 246
Query: 298 MSACLCPR-------------VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACM 344
+S PR +G Q+H A++ GF ++N+ + +Y+ ++ A +
Sbjct: 247 LSIS-APREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305
Query: 345 IFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEM 404
IFA + E ++VSWN MI + Q ++ M+ G +P+E T S+L
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLG------- 358
Query: 405 VEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLL 464
A ++ ++ +IF ++ ++ WN +++G+
Sbjct: 359 -------------------------ACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 465 NGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSL 524
+ + +F ++ L+PD+ TLSV LSSCAR+ L GKQIHG V++ + +
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHI 453
Query: 525 GNAMITLYAKCGDLDCSLRVFNMMI-EKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
+ +I +Y++C ++ S +F+ I E D WN++IS + + +A+ F+ M
Sbjct: 454 VSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTA 513
Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
+ P++ +F VLS+CS + G R F +V G++ + + D+ + G +D
Sbjct: 514 VLCPNETSFATVLSSCSRLCSLLHG-RQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDS 572
Query: 644 AERVINS 650
A + ++
Sbjct: 573 ARQFFDA 579
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 179/382 (46%), Gaps = 22/382 (5%)
Query: 327 NAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIR 386
NA +T G + EAC +F + E+D+VSWN MIS ++ A++ Y M G
Sbjct: 76 NAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFL 135
Query: 387 PDEFTFGSLL-ASSGFIEMV--EMIHAFVFINGIITNIQVSNALISAYAKNERI-KQAYQ 442
P FT S+L A S ++ V H G+ NI V NAL+S YAK I +
Sbjct: 136 PSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVR 195
Query: 443 IFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALS------S 496
+F ++S N +++ +I G ++ +Q F + ++ D LS LS
Sbjct: 196 VFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREG 255
Query: 497 CARISSL---RHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDT 553
C +S + GKQIH L+ + L N+++ +YAK D++ + +F M E +
Sbjct: 256 CDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNV 315
Query: 554 ISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD 613
+SWN +I + Q ++V M+D G +P++ T +VL AC +G V+ G RIF
Sbjct: 316 VSWNIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETGRRIFS 374
Query: 614 SMVNDYGFIPAEDHLSCMLDLLGRAGYLDEA---ERVINSQHIQARSDNWWALFSACAAH 670
S+ P+ + ML + +EA R + Q+++ + S+CA
Sbjct: 375 SIPQ-----PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARL 429
Query: 671 GNLRLGRIIAGLLLEREQDKPS 692
L G+ I G+++ E K S
Sbjct: 430 RFLEGGKQIHGVVIRTEISKNS 451
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 311 bits (797), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 191/569 (33%), Positives = 308/569 (54%), Gaps = 19/569 (3%)
Query: 174 IGLFREMHKLDVRRDNYSFASVLSVCDAGLLEF--GRQLHSLVTKSGFSCLVSVVNALIT 231
I + H ++ +AS+L C+ + F G Q H+ V KSG +V N+L++
Sbjct: 46 IRILNSTHSSEIPATPKLYASLLQTCNK-VFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 232 MYFNCG-NVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPS 290
+YF G + + +VF+ +V D IS+ MM G + +AL F +M+ L +
Sbjct: 105 LYFKLGPGMRETRRVFDGR--FVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN 162
Query: 291 ELTFVSVMSACLC---PRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFA 347
E T S + AC R+G H + GFE +S+ +Y + +A +F
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 348 RLQEKDIVSWNTMISTYAQRNLGRSAI-LAYLEMQSVGIRPDEFTFGSLLASSGFIEMVE 406
+ E D++ W ++S +++ +L A+ L Y + G+ PD TFG++L + G + ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 407 M---IHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFL 463
IH + NGI +N+ V ++L+ Y K +++A Q+F+ MS +N ++W+ L+ G+
Sbjct: 283 QGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYC 342
Query: 464 LNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMS 523
NG + ++ F E+ +L Y L +CA ++++R GK+IHG ++ +
Sbjct: 343 QNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVI 398
Query: 524 LGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVG 583
+ +A+I LY K G +D + RV++ M ++ I+WNA++SA AQ+G G+EAVS F M G
Sbjct: 399 VESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKG 458
Query: 584 RIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDE 643
IKPD +F A+L+AC H G+VD+G F M YG P +H SCM+DLLGRAG +E
Sbjct: 459 -IKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEE 517
Query: 644 AERVINSQHIQARSDNWWALFSACAAHGNL-RLGRIIAGLLLEREQDKPSVYVLLSNIYA 702
AE ++ + + W L CAA+ + R+ IA ++E E YVLLSN+Y
Sbjct: 518 AENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYK 577
Query: 703 AAGLWEEAANIRELLKRTGVIKQPGCSWI 731
A G +A NIR+L+ R GV K G SWI
Sbjct: 578 AIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/513 (25%), Positives = 229/513 (44%), Gaps = 58/513 (11%)
Query: 6 ITATIAGNSNTSKELLLKLNISLANLSRSGHYQDALHLFVQIHSSH-KLKPDIYSLSTTL 64
+T +I+ ++ T + +L+L + G +A+ + HSS P +Y+ + L
Sbjct: 18 LTPSISSSAPTKQSRILEL-------CKLGQLTEAIRILNSTHSSEIPATPKLYA--SLL 68
Query: 65 AACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLY-KNARDLVSVKRVFSEIQNPDV 123
C + + G Q HA+ +++GL+ +V N++LSLY K + +RVF D
Sbjct: 69 QTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDA 128
Query: 124 YSWTTFLSA-CTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
SWT+ +S T HV A EV F EM
Sbjct: 129 ISWTSMMSGYVTGKEHVK-ALEV-------------------------------FVEMVS 156
Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
+ + ++ +S + C + G + GR H +V GF + + L +Y VD
Sbjct: 157 FGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVD 216
Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSA 300
A +VF+E D I + ++ + EEAL F M L P TF +V++A
Sbjct: 217 ARRVFDEMP--EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 301 CLCPR---VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSW 357
C R G ++H + + +G + V ++ + MY CG + EA +F + +K+ VSW
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 358 NTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAFVFI 414
+ ++ Y Q AI + EM+ D + FG++L + + V + IH
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
Query: 415 NGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQH 474
G N+ V +ALI Y K+ I A +++ MS RN+ITWN +++ NG + +
Sbjct: 391 RGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSF 450
Query: 475 FSELLMSELRPDEYTLSVALSSCARISSLRHGK 507
F++++ ++PD + L++C + G+
Sbjct: 451 FNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 224/481 (46%), Gaps = 50/481 (10%)
Query: 40 ALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTIL 99
AL +FV++ S L + ++LS+ + AC+ L G H + G + +++T+
Sbjct: 147 ALEVFVEM-VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLA 205
Query: 100 SLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNA 159
LY R+ V +RVF D+MP+ D+ + A
Sbjct: 206 YLYGVNREPVDARRVF-------------------------------DEMPEPDVICWTA 234
Query: 160 MITGCTENGYEDIGIGLFREMHK-LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKS 217
+++ ++N + +GLF MH+ + D +F +VL+ C + L+ G+++H + +
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 218 GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALI 277
G V V ++L+ MY CG+V +A +VF + +S++ ++ G G E+A+
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKK--NSVSWSALLGGYCQNGEHEKAIE 352
Query: 278 RFRDMLVASLRPSELTFVSVMSAC---LCPRVGYQVHAQAMKSGFEAYTSVSNAAITMYS 334
FR+M L F +V+ AC R+G ++H Q ++ G V +A I +Y
Sbjct: 353 IFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYG 408
Query: 335 SCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGS 394
G ID A +++++ +++++WN M+S AQ G A+ + +M GI+PD +F +
Sbjct: 409 KSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIA 468
Query: 395 LLASSGFIEMV-EMIHAFVFIN---GIITNIQVSNALISAYAKNERIKQAYQIFHNMSPR 450
+L + G MV E + FV + GI + + +I + ++A + R
Sbjct: 469 ILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR 528
Query: 451 NIIT-WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQI 509
N + W L+ N + + ++ +M EL P +Y +S L S + RHG +
Sbjct: 529 NDASLWGVLLGPCAANADASRVAERIAKRMM-ELEP-KYHMSYVLLSNMYKAIGRHGDAL 586
Query: 510 H 510
+
Sbjct: 587 N 587
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/615 (30%), Positives = 322/615 (52%), Gaps = 13/615 (2%)
Query: 123 VYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
VY T+ L+ K G V A +FD+MP+RD V+NA+I G + NGYE LF M +
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 183 LDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVD 241
+ ++L C G + GR +H + KSG V NALI+ Y C +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 242 ACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC 301
A +F E K +S+N M+ + G EEA+ F++M ++ S +T ++++SA
Sbjct: 205 AEVLFREMKDK--STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA- 261
Query: 302 LCPRVGYQ-VHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTM 360
V ++ +H +K G SV + + YS CG + A ++A ++ IV ++
Sbjct: 262 ---HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 361 ISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFIEMVEMIHAFVFINGI 417
+S YA++ A++ + + + + ++ D +L S I++ +H + +G+
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 418 ITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSE 477
T V N LI+ Y+K + ++ +F + +I+WN++I+G + +G + F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 478 LLMSE-LRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCG 536
++++ L PD T++ L+ C+++ L GK++HGY L+NN ++ + A+I +YAKCG
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCG 498
Query: 537 DLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVL 596
+ + VF + T +WN++IS Y+ G A+SC+ M++ G +KPD+ TF VL
Sbjct: 499 NEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG-LKPDEITFLGVL 557
Query: 597 SACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQAR 656
SAC+H G VD+G F +M+ ++G P H + M+ LLGRA EA +I I+
Sbjct: 558 SACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPD 617
Query: 657 SDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIREL 716
S W AL SAC H L +G +A + + +YVL+SN+YA +W++ +R +
Sbjct: 618 SAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNM 677
Query: 717 LKRTGVIKQPGCSWI 731
+K G G S I
Sbjct: 678 MKDNGYDGYLGVSQI 692
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 244/519 (47%), Gaps = 20/519 (3%)
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLLEFG---R 208
RDL +++++ C I +FR++ + + ++++ + L F
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 209 QLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLAS 268
Q+ + +TKSG V V +L+ +Y G V A +F+E D + +N ++ G +
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPER--DTVVWNALICGYSR 128
Query: 269 VGRVEEALIRFRDMLVASLRPSELTFVSVMSAC-LCPRV--GYQVHAQAMKSGFEAYTSV 325
G +A F ML PS T V+++ C C V G VH A KSG E + V
Sbjct: 129 NGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQV 188
Query: 326 SNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGI 385
NA I+ YS C ++ A ++F +++K VSWNTMI Y+Q L AI + M +
Sbjct: 189 KNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNV 248
Query: 386 RPDEFTFGSLLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFH 445
T +LL++ E +H V G++ +I V +L+ AY++ + A +++
Sbjct: 249 EISPVTIINLLSAH---VSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 446 NMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRH 505
+ +I+ ++++ + G + +FS+ ++ D L L C + S +
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 506 GKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQ 565
G +HGY +K+ L +K + N +IT+Y+K D++ L +F + E ISWN++IS Q
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQ 425
Query: 566 HGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFD-SMVNDYGFIPA 624
G A F M G + PD T ++L+ CS ++ G + ++ N++
Sbjct: 426 SGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF----E 481
Query: 625 EDHLSC--MLDLLGRAGYLDEAERVINSQHIQARSDNWW 661
++ C ++D+ + G +AE V S I+A W
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKS--IKAPCTATW 518
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/554 (25%), Positives = 239/554 (43%), Gaps = 50/554 (9%)
Query: 25 NISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYAL 84
N + SR+G+ DA LF+ + P +L L C + G +H A
Sbjct: 120 NALICGYSRNGYECDAWKLFI-VMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 85 RAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACE 144
++GL+ V N ++S Y +L S + +F E+++ SW T + A ++ G + A
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 145 VFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGLL 204
VF M ++++ + S +++++ A +
Sbjct: 239 VFKNMFEKNVEI----------------------------------SPVTIINLLSAHVS 264
Query: 205 EFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHI-SYNVMM 263
LH LV K G +SVV +L+ Y CG +V A +++ AK D I ++
Sbjct: 265 H--EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQ---DSIVGLTSIV 319
Query: 264 DGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR---VGYQVHAQAMKSGFE 320
A G ++ A++ F ++ + V ++ C +G +H A+KSG
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 321 AYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEM 380
T V N ITMYS ++ +F +LQE ++SWN++IS Q +A + +M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 381 Q-SVGIRPDEFTFGSLLASSG---FIEMVEMIHAFVFINGIITNIQVSNALISAYAKNER 436
+ G+ PD T SLLA + + + +H + N V ALI YAK
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGN 499
Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
QA +F ++ TWN++I+G+ L+G + L + E+ L+PDE T LS+
Sbjct: 500 EVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSA 559
Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMIT--LYAKCGDLDCSLRVFNMMIEKDTI 554
C + GK ++K IS A++ L C + ++ M I+ D+
Sbjct: 560 CNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSA 619
Query: 555 SWNALISAYAQHGE 568
W AL+SA H E
Sbjct: 620 VWGALLSACIIHRE 633
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 4/166 (2%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
L+ N ++ +SG A +F Q+ + L PD ++++ LA C+ L G +LH
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH 472
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMG--H 138
Y LR + V ++ +Y + V + VF I+ P +W + +S + G H
Sbjct: 473 GYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQH 532
Query: 139 VDYAC--EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHK 182
+C E+ +K D + +++ C G+ D G FR M K
Sbjct: 533 RALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIK 578
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 309 bits (791), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 191/565 (33%), Positives = 296/565 (52%), Gaps = 42/565 (7%)
Query: 207 GRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---EEA---------KGYVC 254
G+ LH+L KS + + N + +Y CG + A F EE K Y
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 255 DH-----------------ISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
D +SYN ++ G A A++ F+ M T +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 298 MSACLCPRVGY--QVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQE-KDI 354
++AC C RV Q+H ++ GF++Y+SV+NA +T YS G + EA +F + E +D
Sbjct: 147 IAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDE 205
Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAF 411
VSWN+MI Y Q G A+ Y EM G + D FT S+L + ++ + H
Sbjct: 206 VSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGK 265
Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAY---QIFHNMSPRNIITWNTLINGFLLNG-F 467
+ G N V + LI Y+K Y ++F + +++ WNT+I+G+ +N
Sbjct: 266 LIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Query: 468 PVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGN 526
+ ++ F ++ RPD+ + S+C+ +SS KQIHG +K+++ S ++S+ N
Sbjct: 326 SEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNN 385
Query: 527 AMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIK 586
A+I+LY K G+L + VF+ M E + +S+N +I YAQHG G EA+ ++ M D G I
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG-IA 444
Query: 587 PDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAER 646
P++ TF AVLSAC+H G VD+G F++M + P +H SCM+DLLGRAG L+EAER
Sbjct: 445 PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAER 504
Query: 647 VINSQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGL 706
I++ + S W AL AC H N+ L A L+ + + YV+L+N+YA A
Sbjct: 505 FIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARK 564
Query: 707 WEEAANIRELLKRTGVIKQPGCSWI 731
WEE A++R+ ++ + K+PGCSWI
Sbjct: 565 WEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 246/512 (48%), Gaps = 21/512 (4%)
Query: 71 RNAAFGNQLHAYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFL 130
R+ G LHA +++ + + +++N ++LY L + F + P+V+S+ +
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 131 SACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNY 190
A K + A ++FD++P D YN +I+G + + LF+ M KL D +
Sbjct: 82 KAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGF 141
Query: 191 SFASVLSVCDAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVF---E 247
+ + +++ C ++ +QLH GF SV NA +T Y G + +A VF +
Sbjct: 142 TLSGLIAAC-CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMD 200
Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPR-- 305
E + D +S+N M+ +AL +++M+ + T SV++A
Sbjct: 201 ELR----DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 306 -VGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKID---EACMIFARLQEKDIVSWNTMI 361
G Q H + +K+GF + V + I YS CG D ++ +F + D+V WNTMI
Sbjct: 257 IGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMI 316
Query: 362 STYA-QRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGI 417
S Y+ L A+ ++ +MQ +G RPD+ +F + ++ + + IH + I
Sbjct: 317 SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHI 376
Query: 418 ITN-IQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFS 476
+N I V+NALIS Y K+ ++ A +F M N +++N +I G+ +G + L +
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQ 436
Query: 477 ELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLIS-KMSLGNAMITLYAKC 535
+L S + P++ T LS+CA + G++ + + I + + MI L +
Sbjct: 437 RMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRA 496
Query: 536 GDLDCSLRVFNMMIEKD-TISWNALISAYAQH 566
G L+ + R + M K +++W AL+ A +H
Sbjct: 497 GKLEEAERFIDAMPYKPGSVAWAALLGACRKH 528
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 141/300 (47%), Gaps = 43/300 (14%)
Query: 53 LKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANTILSLYKN---ARDLV 109
K D+++L++ L A +L + G Q H ++AG HV + ++ Y +
Sbjct: 236 FKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMY 295
Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTEN-G 168
++VF EI +PD+ W N MI+G + N
Sbjct: 296 DSEKVFQEILSPDLVVW-------------------------------NTMISGYSMNEE 324
Query: 169 YEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGF-SCLVSVV 226
+ + FR+M ++ R D+ SF V S C + +Q+H L KS S +SV
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 227 NALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVAS 286
NALI++Y+ GN+ DA VF+ + +S+N M+ G A G EAL+ ++ ML +
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPEL--NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 287 LRPSELTFVSVMSACL-CPRVGY-QVHAQAMKSGFEAYTSVSNAA--ITMYSSCGKIDEA 342
+ P+++TFV+V+SAC C +V Q + MK F+ + + I + GK++EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 105/250 (42%), Gaps = 68/250 (27%)
Query: 54 KPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYP-HVANTILSLYKNARDLVSVK 112
+PD S +AC+NL + + Q+H A+++ + + V N ++SLY
Sbjct: 342 RPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLY---------- 391
Query: 113 RVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDI 172
K G++ A VFD+MP+ + +N MI G ++G+
Sbjct: 392 ---------------------YKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTE 430
Query: 173 GIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQLHSLVTKSGFSCLVSVVNALIT 231
+ L++ M + + +F +VLS C G ++ G++
Sbjct: 431 ALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE---------------------- 468
Query: 232 MYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSE 291
YFN + + K+ EA+ Y C M+D L G++EEA RF D + +P
Sbjct: 469 -YFN--TMKETFKIEPEAEHYSC-------MIDLLGRAGKLEEAE-RFIDAM--PYKPGS 515
Query: 292 LTFVSVMSAC 301
+ + +++ AC
Sbjct: 516 VAWAALLGAC 525
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 308 bits (789), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 203/717 (28%), Positives = 354/717 (49%), Gaps = 48/717 (6%)
Query: 24 LNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYA 83
N + +LS G ++ L F + ++KL PD ++ + L ACA+L+ +FG +H
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSM-LANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQV 72
Query: 84 LRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYAC 143
L G + ++++++++LY K G + +A
Sbjct: 73 LVNGFSSDFYISSSLVNLY-------------------------------AKFGLLAHAR 101
Query: 144 EVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL 203
+VF++M +RD+ + AMI + G L EM ++ + +LS G+
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLS----GV 157
Query: 204 LEFGRQ--LHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
LE + LH GF C ++V+N+++ +Y C +V DA +F++ + D +S+N
Sbjct: 158 LEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR--DMVSWNT 215
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS--ACLCP-RVGYQVHAQAMKSG 318
M+ G ASVG + E L M LRP + TF + +S +C +G +H Q +K+G
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275
Query: 319 FEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYL 378
F+ + A ITMY CGK + + + + KD+V W MIS + A++ +
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 379 EMQSVGIRPDEFTFGSLLASS---GFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNE 435
EM G S++AS G ++ +H +V +G + N+LI+ YAK
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 436 RIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRP-DEYTLSVAL 494
+ ++ IF M+ R++++WN +I+G+ N + L F E+ ++ D +T+ L
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 495 SSCARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTI 554
+C+ +L GK IH V+++ + + A++ +Y+KCG L+ + R F+ + KD +
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 555 SWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDS 614
SW LI+ Y HG+G A+ + G ++P+ F AVLS+CSH G+V G +IF S
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSG-MEPNHVIFLAVLSSCSHNGMVQQGLKIFSS 574
Query: 615 MVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
MV D+G P +HL+C++DLL RA +++A + + D + AC A+G
Sbjct: 575 MVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTE 634
Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
+ II ++E + YV L + +AA W++ + ++ G+ K PG S I
Sbjct: 635 VEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKI 691
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/479 (22%), Positives = 206/479 (43%), Gaps = 50/479 (10%)
Query: 21 LLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLH 80
++ N ++ + G+ + L L ++ L+PD + +L+ + + G LH
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 81 AYALRAGLKAYPHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVD 140
++ G H+ ++++Y + RV I N DV WT +S ++G +
Sbjct: 269 CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAE 328
Query: 141 YACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC- 199
A L V++ M+ ++ E I ASV++ C
Sbjct: 329 KA-----------LIVFSEMLQSGSDLSSEAI--------------------ASVVASCA 357
Query: 200 DAGLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISY 259
G + G +H V + G++ +N+LITMY CG++ + +FE D +S+
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNER--DLVSW 415
Query: 260 NVMMDGLASVGRVEEALIRFRDMLVASLRPSE-LTFVSVMSACLCP---RVGYQVHAQAM 315
N ++ G A + +AL+ F +M +++ + T VS++ AC VG +H +
Sbjct: 416 NAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVI 475
Query: 316 KSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAIL 375
+S + V A + MYS CG ++ A F + KD+VSW +I+ Y G A+
Sbjct: 476 RSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALE 535
Query: 376 AYLEMQSVGIRPDEFTFGSLLASSGFIEMVE----MIHAFVFINGIITNIQVSNALISAY 431
Y E G+ P+ F ++L+S MV+ + + V G+ N + ++
Sbjct: 536 IYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLL 595
Query: 432 AKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDE 487
+ +RI+ A++ + R I + G +L+ G +++ M EL+P +
Sbjct: 596 CRAKRIEDAFKFYKENFTRPSID----VLGIILDACRANGKTEVEDIICEDMIELKPGD 650
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 315/620 (50%), Gaps = 20/620 (3%)
Query: 122 DVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMH 181
D+ T +S G+ A VFD++P+ D ++ M+ N + L+ +
Sbjct: 75 DISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 182 KLDVRRDNYSFASVLSVC-DAGLLEFGRQLH-SLVTKSGFSCLVSVVNALITMYFNCGNV 239
K R D+ F+ L C + L+ G+++H LV F +V + L+ MY CG +
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV--LTGLLDMYAKCGEI 192
Query: 240 VDACKVFEEA--KGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSV 297
A KVF + + VC + M+ G EE L+ F M ++ +E T+ ++
Sbjct: 193 KSAHKVFNDITLRNVVC----WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTL 248
Query: 298 MSACL---CPRVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDI 354
+ AC G H +KSG E + + + + MY CG I A +F D+
Sbjct: 249 IMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDL 308
Query: 355 VSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLLASSGFIEMVEM---IHAF 411
V W MI Y A+ + +M+ V I+P+ T S+L+ G IE +E+ +H
Sbjct: 309 VMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGL 368
Query: 412 VFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQG 471
GI + V+NAL+ YAK + + A +F S ++I+ WN++I+GF NG +
Sbjct: 369 SIKVGIW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 472 LQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLI--SKMSLGNAMI 529
L F + + P+ T++ S+CA + SL G +H Y +K + S + +G A++
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 530 TLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQ 589
YAKCGD + +F+ + EK+TI+W+A+I Y + G+ ++ F+ M + KP++
Sbjct: 488 DFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ-KPNE 546
Query: 590 ATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDLLGRAGYLDEAERVIN 649
+TFT++LSAC H G+V++G + F SM DY F P+ H +CM+D+L RAG L++A +I
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606
Query: 650 SQHIQARSDNWWALFSACAAHGNLRLGRIIAGLLLEREQDKPSVYVLLSNIYAAAGLWEE 709
IQ + A C H LG I+ +L+ D S YVL+SN+YA+ G W +
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQ 666
Query: 710 AANIRELLKRTGVIKQPGCS 729
A +R L+K+ G+ K G S
Sbjct: 667 AKEVRNLMKQRGLSKIAGHS 686
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 147/559 (26%), Positives = 257/559 (45%), Gaps = 51/559 (9%)
Query: 51 HKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT-ILSLYKNARDLV 109
H + D S L AC L++ G ++H ++ + ++ +V T +L +Y ++
Sbjct: 136 HGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK--VPSFDNVVLTGLLDMYAKCGEIK 193
Query: 110 SVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGY 169
S +VF++I +V WT+ MI G +N
Sbjct: 194 SAHKVFNDITLRNVVCWTS-------------------------------MIAGYVKNDL 222
Query: 170 EDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQLHSLVTKSGFSCLVSVVNA 228
+ G+ LF M + +V + Y++ +++ C L G+ H + KSG +V +
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 229 LITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLR 288
L+ MY CG++ +A +VF E D + + M+ G G V EAL F+ M ++
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSH--VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 289 PSELTFVSVMSACLCP---RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMI 345
P+ +T SV+S C +G VH ++K G T+V+NA + MY+ C + +A +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYV 399
Query: 346 FARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPDEFTFGSLL---ASSGFI 402
F EKDIV+WN++IS ++Q A+ + M S + P+ T SL AS G +
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 403 EMVEMIHAFVFINGII--TNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLIN 460
+ +HA+ G + +++ V AL+ YAK + A IF + +N ITW+ +I
Sbjct: 460 AVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIG 519
Query: 461 GFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKN-NLI 519
G+ G + L+ F E+L + +P+E T + LS+C + GK+ + K+ N
Sbjct: 520 GYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFT 579
Query: 520 SKMSLGNAMITLYAKCGDLDCSLRVFNMM-IEKDTISWNALISAYAQHGEGKEAVSCFKA 578
M+ + A+ G+L+ +L + M I+ D + A + H K
Sbjct: 580 PSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 579 MQDVGRIKPDQATFTAVLS 597
M D + PD A++ ++S
Sbjct: 640 MLD---LHPDDASYYVLVS 655
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/511 (24%), Positives = 246/511 (48%), Gaps = 27/511 (5%)
Query: 208 RQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLA 267
RQ H ++T +G +S+ L+++Y G DA VF++ D + VM+
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP--DFYLWKVMLR-CY 117
Query: 268 SVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEAYT 323
+ + +++ D+L+ R ++ F + AC + G ++H Q +K
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK-----VP 172
Query: 324 SVSNAAIT----MYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLE 379
S N +T MY+ CG+I A +F + +++V W +MI+ Y + +L ++ +
Sbjct: 173 SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNR 232
Query: 380 MQSVGIRPDEFTFGSLLASSGFIEMV---EMIHAFVFINGIITNIQVSNALISAYAKNER 436
M+ + +E+T+G+L+ + + + + H + +GI + + +L+ Y K
Sbjct: 233 MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGD 292
Query: 437 IKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSS 496
I A ++F+ S +++ W +I G+ NG + L F ++ E++P+ T++ LS
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 497 CARISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISW 556
C I +L G+ +HG +K I ++ NA++ +YAKC + VF M EKD ++W
Sbjct: 353 CGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 411
Query: 557 NALISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMV 616
N++IS ++Q+G EA+ F M + P+ T ++ SAC+ G + G+ + V
Sbjct: 412 NSIISGFSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 617 NDYGFIPAED-HL-SCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLR 674
GF+ + H+ + +LD + G ++ R+I + + W A+ G+
Sbjct: 471 K-LGFLASSSVHVGTALLDFYAKCGD-PQSARLIFDTIEEKNTITWSAMIGGYGKQGD-T 527
Query: 675 LGRIIAGLLLEREQDKPSVYVLLSNIYAAAG 705
+G + + ++Q KP+ S I +A G
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTS-ILSACG 557
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 217/475 (45%), Gaps = 58/475 (12%)
Query: 38 QDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAYPHVANT 97
++ L LF ++ ++ L + Y+ T + AC L G H +++G++ + +
Sbjct: 224 EEGLVLFNRMRENNVLGNE-YTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 98 ILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPDRDLPVY 157
+L +Y D+ + +RVF+E + D+ WT + T G V+ A
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEA--------------- 327
Query: 158 NAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDAGL---LEFGRQLHSLV 214
+ LF++M ++++ + + ASVLS C GL LE GR +H L
Sbjct: 328 ----------------LSLFQKMKGVEIKPNCVTIASVLSGC--GLIENLELGRSVHGLS 369
Query: 215 TKSGFSCLVSVVNALITMYFNCGNVVDACKVFE-EAKGYVCDHISYNVMMDGLASVGRVE 273
K G +V NAL+ MY C DA VFE E++ D +++N ++ G + G +
Sbjct: 370 IKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEK---DIVAWNSIISGFSQNGSIH 425
Query: 274 EALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTS--VSNA 328
EAL F M S+ P+ +T S+ SAC VG +HA ++K GF A +S V A
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 329 AITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRPD 388
+ Y+ CG A +IF ++EK+ ++W+ MI Y ++ ++ + EM +P+
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 389 EFTFGSLLASSGFIEMV----EMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIF 444
E TF S+L++ G MV + + + + ++ A+ ++QA I
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 445 HNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELL---MSELRPDEYTLSVALSS 496
M I + G L+G + E++ M +L PD+ + V +S+
Sbjct: 606 EKMP----IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 150/318 (47%), Gaps = 14/318 (4%)
Query: 395 LLASSGFIEMVEMIHAFVFINGIITNIQVSNALISAYAKNERIKQAYQIFHNMSPRNIIT 454
LL+ I+ + H + NG++ +I ++ L+S Y K A +F + +
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 455 WNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCARISSLRHGKQIHGYVL 514
W ++ + LN V+ ++ + L+ R D+ S AL +C + L +GK+IH ++
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 515 KNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNALISAYAQHGEGKEAVS 574
K + L ++ +YAKCG++ + +VFN + ++ + W ++I+ Y ++ +E +
Sbjct: 170 KVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 575 CFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVNDYGFIPAEDHLSCMLDL 634
F M++ + ++ T+ ++ AC+ + G +V G + ++ +LD+
Sbjct: 229 LFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS-GIELSSCLVTSLLDM 286
Query: 635 LGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGN----LRLGRIIAGLLLEREQDK 690
+ G + A RV N +H W A+ +G+ L L + + G+ + K
Sbjct: 287 YVKCGDISNARRVFN-EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-----EIK 340
Query: 691 PSVYVLLSNIYAAAGLWE 708
P+ V ++++ + GL E
Sbjct: 341 PNC-VTIASVLSGCGLIE 357
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 166/386 (43%), Gaps = 59/386 (15%)
Query: 32 SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
+ +G +AL LF ++ ++KP+ ++++ L+ C + N G +H +++ G+
Sbjct: 319 THNGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD- 376
Query: 92 PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
+VAN ++ +Y K VF D+ +W +
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS----------------------- 413
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVCDA-GLLEFGRQL 210
+I+G ++NG + LF M+ V + + AS+ S C + G L G L
Sbjct: 414 --------IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 211 HSLVTKSGF--SCLVSVVNALITMYFNCGNVVDACKVFE--EAKGYVCDHISYNVMMDGL 266
H+ K GF S V V AL+ Y CG+ A +F+ E K + I+++ M+ G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEK----NTITWSAMIGGY 521
Query: 267 ASVGRVEEALIRFRDMLVASLRPSELTFVSVMSACLCPRV---GYQVHAQAMKS-GFEAY 322
G +L F +ML +P+E TF S++SAC + G + + K F
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPS 581
Query: 323 TSVSNAAITMYSSCGKIDEACMIFARLQ-EKDIVSWNTMI---STYAQRNLGRSAILAYL 378
T + M + G++++A I ++ + D+ + + +++ +LG I L
Sbjct: 582 TKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKML 641
Query: 379 EMQSVGIRPDEFTF----GSLLASSG 400
++ PD+ ++ +L AS G
Sbjct: 642 DLH-----PDDASYYVLVSNLYASDG 662
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 122/287 (42%), Gaps = 39/287 (13%)
Query: 17 SKELLLKLNISLANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFG 76
S++ ++ N ++ S++G +AL LF +++S + P+ ++++ +ACA+L + A G
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNS-ESVTPNGVTVASLFSACASLGSLAVG 462
Query: 77 NQLHAYALRAGLKAYP--HVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACT 134
+ LHAY+++ G A HV +L Y D S + +F I+ + +W+
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWS------- 515
Query: 135 KMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFAS 194
AMI G + G + LF EM K + + +F S
Sbjct: 516 ------------------------AMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTS 551
Query: 195 VLSVCD-AGLLEFGRQLHSLVTKS-GFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGY 252
+LS C G++ G++ S + K F+ ++ M G + A + E+
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMP-I 610
Query: 253 VCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMS 299
D + + G R + I + ML L P + ++ ++S
Sbjct: 611 QPDVRCFGAFLHGCGMHSRFDLGEIVIKKML--DLHPDDASYYVLVS 655
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 306 bits (784), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 291/533 (54%), Gaps = 17/533 (3%)
Query: 209 QLHSLVTKSG-FSCLVSVVNALITMYFNCGNVVDACKVFEE--AKGYVCDHISYNVMMDG 265
Q+H+ V +G S+ LI G + A KVF+E +G YN M+
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSV----YNSMIV- 89
Query: 266 LASVGRVEEALIRFRDMLVA-SLRPSELTFVSVMSACLCPRV---GYQVHAQAMKSGFEA 321
+ S G+ + ++R D ++A ++P TF + ACL V G V +A+ G++
Sbjct: 90 VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 322 YTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQ 381
V ++ + +Y CGK+DEA ++F ++ ++D++ W TM++ +AQ A+ Y EMQ
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 382 SVGIRPDEFTFGSLLASSGFI---EMVEMIHAFVFINGIITNIQVSNALISAYAKNERIK 438
+ G D LL +SG + +M +H +++ G+ N+ V +L+ YAK I+
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 439 QAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMSELRPDEYTLSVALSSCA 498
A ++F M + ++W +LI+GF NG + + E+ +PD TL L +C+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 499 RISSLRHGKQIHGYVLKNNLISKMSLGNAMITLYAKCGDLDCSLRVFNMMIEKDTISWNA 558
++ SL+ G+ +H Y+LK +++ +++ A++ +Y+KCG L S +F + KD + WN
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 559 LISAYAQHGEGKEAVSCFKAMQDVGRIKPDQATFTAVLSACSHAGLVDDGTRIFDSMVND 618
+IS Y HG G+E VS F M + I+PD ATF ++LSA SH+GLV+ G F M+N
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTE-SNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447
Query: 619 YGFIPAEDHLSCMLDLLGRAGYLDEAERVINSQHIQARSDNWWALFSACAAHGNLRLGRI 678
Y P+E H C++DLL RAG ++EA +INS+ + W AL S C H NL +G I
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDI 507
Query: 679 IAGLLLEREQDKPSVYVLLSNIYAAAGLWEEAANIRELLKRTGVIKQPGCSWI 731
A +L+ D + L+SN +A A W+E A +R+L++ + K PG S I
Sbjct: 508 AANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAI 560
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 219/447 (48%), Gaps = 12/447 (2%)
Query: 129 FLSACTKMGHVDYACEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRD 188
+++C ++G + YA +VFD++P R + VYN+MI + D + L+ +M ++ D
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 189 NYSFASVLSVCDAGL-LEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFE 247
+ +F + C +GL LE G + G+ V V ++++ +Y CG + +A +F
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF- 174
Query: 248 EAKGYVCDHISYNVMMDGLASVGRVEEALIRFRDMLVASLRPSELTFVSVMSAC---LCP 304
K D I + M+ G A G+ +A+ +R+M + + ++ A
Sbjct: 175 -GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDT 233
Query: 305 RVGYQVHAQAMKSGFEAYTSVSNAAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTY 364
++G VH ++G V + + MY+ G I+ A +F+R+ K VSW ++IS +
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Query: 365 AQRNLGRSAILAYLEMQSVGIRPDEFTF-GSLLASS--GFIEMVEMIHAFVFINGIITNI 421
AQ L A A +EMQS+G +PD T G L+A S G ++ ++H ++ ++ +
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV 353
Query: 422 QVSNALISAYAKNERIKQAYQIFHNMSPRNIITWNTLINGFLLNGFPVQGLQHFSELLMS 481
+ AL+ Y+K + + +IF ++ ++++ WNT+I+ + ++G + + F ++ S
Sbjct: 354 -TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 482 ELRPDEYTLSVALSSCARISSLRHGKQIHGYVLKNNLISKMSLGNA-MITLYAKCGDLDC 540
+ PD T + LS+ + + G+ ++ I +I L A+ G ++
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 541 SLRVFNMMIEKDTIS-WNALISAYAQH 566
+L + N + + W AL+S H
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINH 499
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 191/443 (43%), Gaps = 52/443 (11%)
Query: 32 SRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAGLKAY 91
SR + + L L+ Q+ + K++PD + + T+ AC + G + A+ G K
Sbjct: 92 SRGKNPDEVLRLYDQM-IAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 92 PHVANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYACEVFDKMPD 151
V +++L+LY K G +D A +F KM
Sbjct: 151 VFVCSSVLNLY-------------------------------MKCGKMDEAEVLFGKMAK 179
Query: 152 RDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLSVC-DAGLLEFGRQL 210
RD+ + M+TG + G + +REM RD +L D G + GR +
Sbjct: 180 RDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 211 HSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNVMMDGLASVG 270
H + ++G V V +L+ MY G + A +VF ++ +S+ ++ G A G
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVF--SRMMFKTAVSWGSLISGFAQNG 297
Query: 271 RVEEALIRFRDMLVASLRPSELTFVSVMSACL---CPRVGYQVHAQAMKSGFEAYTSVSN 327
+A +M +P +T V V+ AC + G VH +K + +
Sbjct: 298 LANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-AT 356
Query: 328 AAITMYSSCGKIDEACMIFARLQEKDIVSWNTMISTYAQRNLGRSAILAYLEMQSVGIRP 387
A + MYS CG + + IF + KD+V WNTMIS Y G+ + +L+M I P
Sbjct: 357 ALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEP 416
Query: 388 DEFTFGSLLAS---SGFIEMVEMIHAF-VFINGIITNIQVSNA----LISAYAKNERIKQ 439
D TF SLL++ SG +E + H F V IN IQ S LI A+ R+++
Sbjct: 417 DHATFASLLSALSHSGLVEQGQ--HWFSVMINKY--KIQPSEKHYVCLIDLLARAGRVEE 472
Query: 440 AYQIFHNMSPRNIIT-WNTLING 461
A + ++ N + W L++G
Sbjct: 473 ALDMINSEKLDNALPIWVALLSG 495
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 115/285 (40%), Gaps = 81/285 (28%)
Query: 28 LANLSRSGHYQDALHLFVQIHSSHKLKPDIYSLSTTLAACANLRNAAFGNQLHAYALRAG 87
++ +++G A V++ S +PD+ +L L AC+ + + G +H Y L+
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSL-GFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKR- 347
Query: 88 LKAYPHV-----ANTILSLYKNARDLVSVKRVFSEIQNPDVYSWTTFLSACTKMGHVDYA 142
HV A ++ +Y L S + +F + D+ W T +S
Sbjct: 348 -----HVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISC---------- 392
Query: 143 CEVFDKMPDRDLPVYNAMITGCTENGYEDIGIGLFREMHKLDVRRDNYSFASVLS-VCDA 201
G NG E + LF +M + ++ D+ +FAS+LS + +
Sbjct: 393 -------------------YGIHGNGQEV--VSLFLKMTESNIEPDHATFASLLSALSHS 431
Query: 202 GLLEFGRQLHSLVTKSGFSCLVSVVNALITMYFNCGNVVDACKVFEEAKGYVCDHISYNV 261
GL+E G+ S+ +++ K+ K YVC
Sbjct: 432 GLVEQGQHWFSV-------------------------MINKYKIQPSEKHYVC------- 459
Query: 262 MMDGLASVGRVEEALIRFRDMLVASLRPSELT-FVSVMSACLCPR 305
++D LA GRVEEAL DM+ + + L +V+++S C+ R
Sbjct: 460 LIDLLARAGRVEEAL----DMINSEKLDNALPIWVALLSGCINHR 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,916,049
Number of Sequences: 539616
Number of extensions: 10038334
Number of successful extensions: 33089
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 21867
Number of HSP's gapped (non-prelim): 2632
length of query: 733
length of database: 191,569,459
effective HSP length: 125
effective length of query: 608
effective length of database: 124,117,459
effective search space: 75463415072
effective search space used: 75463415072
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)