Query 004738
Match_columns 732
No_of_seqs 403 out of 2142
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 04:13:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004738.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004738hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbk_A DNA repair and telomere 100.0 4.1E-81 1.4E-85 695.4 40.5 391 5-404 69-472 (472)
2 4fbw_A DNA repair protein RAD3 100.0 2E-81 6.7E-86 691.7 37.2 391 6-405 7-410 (417)
3 3t1i_A Double-strand break rep 100.0 6.8E-80 2.3E-84 682.0 38.3 392 5-405 25-423 (431)
4 1ii7_A MRE11 nuclease; RAD50, 100.0 2.5E-33 8.4E-38 298.5 28.1 284 13-374 1-310 (333)
5 3av0_A DNA double-strand break 100.0 2.9E-32 9.8E-37 296.5 34.0 278 8-371 16-301 (386)
6 2q8u_A Exonuclease, putative; 100.0 1.6E-30 5.5E-35 276.5 27.6 259 9-321 15-290 (336)
7 3tho_B Exonuclease, putative; 100.0 7E-31 2.4E-35 285.6 22.4 250 13-320 1-271 (379)
8 3d03_A Phosphohydrolase; glyce 99.8 1.2E-19 4.1E-24 183.9 13.2 242 13-316 1-264 (274)
9 3ib7_A ICC protein; metallopho 99.8 3.9E-19 1.3E-23 185.3 14.3 243 8-313 21-282 (330)
10 1uf3_A Hypothetical protein TT 99.8 4.2E-18 1.4E-22 167.7 14.5 202 11-309 4-227 (228)
11 2yvt_A Hypothetical protein AQ 99.7 9.4E-18 3.2E-22 169.6 12.1 44 11-66 4-47 (260)
12 1z2w_A Vacuolar protein sortin 99.7 2E-16 6.8E-21 155.6 13.6 72 244-321 116-188 (192)
13 2a22_A Vacuolar protein sortin 99.7 3.8E-16 1.3E-20 156.7 15.6 100 217-322 112-213 (215)
14 2xmo_A LMO2642 protein; phosph 99.6 4.1E-15 1.4E-19 162.9 20.5 249 8-310 35-333 (443)
15 2kkn_A Uncharacterized protein 99.6 6E-15 2.1E-19 144.6 12.3 52 244-309 127-178 (178)
16 2nxf_A Putative dimetal phosph 99.6 3.6E-14 1.2E-18 145.8 16.9 87 10-131 3-100 (322)
17 1s3l_A Hypothetical protein MJ 99.6 1.2E-14 4.2E-19 143.7 11.8 163 11-304 24-187 (190)
18 1ute_A Protein (II purple acid 99.5 1.9E-13 6.4E-18 140.2 17.7 254 10-320 4-300 (313)
19 1su1_A Hypothetical protein YF 99.4 1.5E-12 5.1E-17 130.2 17.2 177 10-318 23-203 (208)
20 3qfm_A SAPH, putative uncharac 99.4 2.3E-12 8E-17 133.9 15.6 208 8-309 7-229 (270)
21 3ck2_A Conserved uncharacteriz 99.4 1E-12 3.5E-17 127.2 11.6 89 219-316 78-168 (176)
22 1nnw_A Hypothetical protein; s 99.3 2.8E-12 9.6E-17 129.7 11.4 71 12-131 1-76 (252)
23 3rl5_A Metallophosphoesterase 99.3 2.6E-11 9E-16 128.4 15.5 202 8-298 55-291 (296)
24 3rqz_A Metallophosphoesterase; 99.3 1E-11 3.5E-16 126.4 9.7 54 11-82 2-55 (246)
25 1xm7_A Hypothetical protein AQ 99.2 1.3E-11 4.6E-16 121.1 7.8 81 12-131 1-84 (195)
26 3tgh_A Glideosome-associated p 99.2 7.4E-11 2.5E-15 127.2 13.7 262 11-321 2-305 (342)
27 1xzw_A Purple acid phosphatase 99.0 8.6E-09 2.9E-13 112.9 18.1 78 9-132 123-205 (426)
28 2qfp_A Purple acid phosphatase 99.0 3.7E-09 1.3E-13 115.6 14.3 78 9-132 116-198 (424)
29 3ive_A Nucleotidase; structura 98.8 1.4E-08 4.8E-13 114.4 12.1 217 11-276 5-254 (509)
30 1hp1_A 5'-nucleotidase; metall 98.8 3.3E-08 1.1E-12 111.3 14.4 204 10-259 6-233 (516)
31 2wdc_A SOXB, sulfur oxidation 98.8 2.1E-08 7.2E-13 114.6 12.1 186 38-276 105-307 (562)
32 2z1a_A 5'-nucleotidase; metal- 98.8 2.7E-08 9.2E-13 113.2 12.4 201 9-259 26-244 (552)
33 3qfk_A Uncharacterized protein 98.6 2.3E-07 7.9E-12 104.9 13.9 218 9-276 16-266 (527)
34 4h2g_A 5'-nucleotidase; dimer, 98.6 1.4E-07 4.8E-12 107.2 10.4 57 9-65 22-87 (546)
35 3ztv_A NAD nucleotidase, NADN; 98.5 2.3E-07 7.9E-12 106.3 9.3 57 9-65 9-75 (579)
36 3jyf_A 2',3'-cyclic nucleotide 98.4 3.3E-06 1.1E-10 90.9 16.5 54 11-64 7-65 (339)
37 3gve_A YFKN protein; alpha-bet 98.4 1.9E-06 6.6E-11 92.7 13.8 57 9-65 8-69 (341)
38 1g5b_A Serine/threonine protei 98.0 2.2E-06 7.4E-11 85.5 2.4 46 9-66 9-55 (221)
39 3c9f_A 5'-nucleotidase; 2',3'- 97.9 1.3E-05 4.6E-10 91.5 7.3 58 7-64 10-73 (557)
40 1t71_A Phosphatase, conserved 97.8 0.00011 3.7E-09 77.4 12.9 191 11-273 3-203 (281)
41 2qjc_A Diadenosine tetraphosph 97.8 9.5E-06 3.2E-10 83.8 4.8 43 12-66 18-61 (262)
42 2dfj_A Diadenosinetetraphospha 97.7 1.6E-05 5.6E-10 83.2 4.3 53 13-81 1-54 (280)
43 4h1s_A 5'-nucleotidase; hydrol 97.6 0.00018 6.1E-09 81.2 11.5 54 12-65 3-65 (530)
44 1t70_A Phosphatase; crystal, X 97.5 0.00062 2.1E-08 70.6 12.4 185 13-273 1-193 (255)
45 3e0j_A DNA polymerase subunit 97.4 0.00053 1.8E-08 76.9 10.6 54 9-65 197-258 (476)
46 2z72_A Protein-tyrosine-phosph 97.3 0.00021 7.3E-09 76.6 6.5 78 10-131 68-153 (342)
47 2yeq_A Apased, PHOD, alkaline 97.3 0.0061 2.1E-07 69.1 18.1 43 10-65 114-156 (527)
48 2z06_A Putative uncharacterize 97.2 0.0032 1.1E-07 65.2 13.6 186 13-273 1-190 (252)
49 2ie4_C PP2A-alpha;, serine/thr 97.0 0.00084 2.9E-08 71.4 7.3 74 12-132 49-122 (309)
50 1wao_1 Serine/threonine protei 97.0 0.0012 4E-08 73.2 8.2 74 11-131 211-285 (477)
51 1fjm_A Protein serine/threonin 96.9 0.0014 4.8E-08 70.3 7.2 72 13-131 57-128 (330)
52 3h63_A Serine/threonine-protei 96.7 0.0031 1.1E-07 67.3 8.7 75 10-131 57-132 (315)
53 3icf_A PPT, serine/threonine-p 96.7 0.0038 1.3E-07 67.1 8.7 50 11-72 62-112 (335)
54 3e7a_A PP-1A, serine/threonine 96.6 0.0026 8.8E-08 67.5 7.2 72 13-131 56-127 (299)
55 1aui_A Calcineurin, serine/thr 96.4 0.0041 1.4E-07 70.3 7.2 73 12-131 82-154 (521)
56 3ll8_A Serine/threonine-protei 96.4 0.0045 1.5E-07 67.1 7.2 54 13-82 70-123 (357)
57 3flo_A DNA polymerase alpha su 93.0 0.17 5.7E-06 56.6 7.8 51 10-67 145-196 (460)
58 1b34_A Protein (small nuclear 81.7 0.3 1E-05 44.9 0.2 14 585-598 102-115 (119)
59 1b34_A Protein (small nuclear 75.3 0.58 2E-05 42.9 0.0 15 584-598 97-111 (119)
60 1g5b_A Serine/threonine protei 62.3 3.6 0.00012 40.3 2.5 30 244-277 177-206 (221)
61 3tnj_A Universal stress protei 46.0 35 0.0012 30.3 6.1 19 40-58 98-116 (150)
62 3w01_A Heptaprenylglyceryl pho 45.4 35 0.0012 34.7 6.7 15 45-59 30-44 (235)
63 3vzx_A Heptaprenylglyceryl pho 39.3 33 0.0011 34.7 5.3 16 44-59 24-39 (228)
64 3hv2_A Response regulator/HD d 39.3 37 0.0013 30.0 5.2 58 5-63 7-70 (153)
65 1mjh_A Protein (ATP-binding do 38.7 66 0.0023 28.8 6.9 12 117-128 150-161 (162)
66 1jmv_A USPA, universal stress 34.4 59 0.002 28.3 5.7 22 39-60 90-111 (141)
67 2dum_A Hypothetical protein PH 31.1 95 0.0033 28.1 6.7 16 116-131 146-161 (170)
68 3fdx_A Putative filament prote 30.4 73 0.0025 27.7 5.6 21 39-59 94-114 (143)
69 2pjk_A 178AA long hypothetical 30.2 76 0.0026 30.5 6.0 28 34-61 63-91 (178)
70 3j21_Z 50S ribosomal protein L 26.1 76 0.0026 27.4 4.8 21 40-60 20-40 (99)
71 3cpq_A 50S ribosomal protein L 25.1 61 0.0021 28.7 4.0 22 40-61 26-47 (110)
72 3men_A Acetylpolyamine aminohy 24.6 1.4E+02 0.0047 32.3 7.4 46 35-80 275-327 (362)
73 3hdg_A Uncharacterized protein 24.1 2E+02 0.0069 24.3 7.2 54 10-63 5-63 (137)
74 3s3t_A Nucleotide-binding prot 24.0 1.2E+02 0.004 26.5 5.7 19 40-58 96-115 (146)
75 2xzm_U Ribosomal protein L7AE 22.8 1.5E+02 0.0051 27.1 6.2 24 40-63 29-52 (126)
76 3pzy_A MOG; ssgcid, seattle st 22.7 1.8E+02 0.006 27.5 7.0 24 38-61 53-76 (164)
77 2qjc_A Diadenosine tetraphosph 22.1 83 0.0028 31.7 4.8 45 245-301 196-240 (262)
78 3cqj_A L-ribulose-5-phosphate 21.9 2.8E+02 0.0095 27.4 8.7 54 29-83 99-153 (295)
79 1w41_A 50S ribosomal protein L 20.5 91 0.0031 27.0 4.1 21 40-60 21-41 (101)
80 3q9b_A Acetylpolyamine amidohy 20.2 1.5E+02 0.005 31.8 6.4 47 35-81 257-310 (341)
81 2gm3_A Unknown protein; AT3G01 20.1 1E+02 0.0036 28.0 4.7 15 116-130 153-167 (175)
82 4hwg_A UDP-N-acetylglucosamine 20.1 1.4E+02 0.0048 31.8 6.4 27 37-63 80-106 (385)
No 1
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=100.00 E-value=4.1e-81 Score=695.41 Aligned_cols=391 Identities=45% Similarity=0.820 Sum_probs=347.2
Q ss_pred CCcCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhcc
Q 004738 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCL 84 (732)
Q Consensus 5 ~~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~ 84 (732)
....+.++|||||+||+|||+...+..++.+.+.+|+++++.|.+++||+||++|||||...|+..++..+++.|++||+
T Consensus 69 ~~~~~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~ 148 (472)
T 4fbk_A 69 GSAGSENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCL 148 (472)
T ss_dssp ----CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred cCCCCCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcc
Confidence 34456789999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCcc
Q 004738 85 NDRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVG 163 (732)
Q Consensus 85 gd~p~~~e~lSd~~~~F-~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~ 163 (732)
||+||+||+|+|+..+| .+.|.+|||||||.+++||||+|+||||.+.+.+..+++++|..+|++++||... ..+
T Consensus 149 g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~----~~d 224 (472)
T 4fbk_A 149 GDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----END 224 (472)
T ss_dssp SSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCS----CSS
T ss_pred cCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcc----cCC
Confidence 99999999999999999 5789999999999999999999999999999877678999999999999999853 346
Q ss_pred ceeEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCC
Q 004738 164 EITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243 (732)
Q Consensus 164 ~i~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp 243 (732)
++.+.|+++++|.++++|||+||++++++.+++.+ ..+.+++|... ..+||||+|+|+++.++++.+++++.+++
T Consensus 225 ~i~~~pv~l~kg~~~valyGl~y~~d~rl~r~~~e-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yipe~ll~ 299 (472)
T 4fbk_A 225 NIVVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQ 299 (472)
T ss_dssp SEEECCEEEEETTEEEEEEECCCCCHHHHHHHHHT-TCEEEEEESTT----GGGEEEEEEEESCSCCSSTTSSCCGGGSC
T ss_pred ceeEEEEEEEeCCceEEEEecCCCchhhhhhhhhh-hhhhhhCcccc----cCCceEEEEecCCccCCCccccCChhhhh
Confidence 88999999999999999999999999999988876 45777766421 25799999999999988777899999999
Q ss_pred cCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEECCCCCcEEEEEEEec
Q 004738 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILK 323 (732)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI~L~ 323 (732)
.++|||||||+|.+++.+...+..+.+++||||+++++++++|.++|+|+||+|+++.+++++|||.++|||++++|+|+
T Consensus 300 ~g~DyValGH~H~~~~~~~~~~~~g~~ivyPGS~~~~s~~e~E~~~kg~~lveI~~~~v~ve~I~L~t~Rpf~~~~i~L~ 379 (472)
T 4fbk_A 300 DFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILS 379 (472)
T ss_dssp TTCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCGGGCSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGG
T ss_pred cCCCEEEecCcccceeeecccCCCCeEEEECCCccccccCccCCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEEe
Confidence 99999999999999886544445568999999999999998888899999999999999999999999999999999999
Q ss_pred cCCCCCC--CCHhHHHHHHHHHHHHHHHHhhhhccc---------cccCCCCeEEEEEEeec-ccccChhhhhhHHhhcc
Q 004738 324 DEADIDP--DDQNSILEHLDKVVRNLIERSSKKTVN---------RSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKV 391 (732)
Q Consensus 324 ~~~~~~~--~~~~ei~~~l~~~Ve~li~~a~~~~~~---------~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~g~V 391 (732)
+..++.+ ++.++|.++|.++|++||++|++++.. ..++++|||||||+||| |+++||+||||+|+|+|
T Consensus 380 ~~~~~~~~~~~~~~v~~~l~~~v~~~i~~a~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~f~~~v 459 (472)
T 4fbk_A 380 EVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRV 459 (472)
T ss_dssp GCSSCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHGGGTTTC
T ss_pred cccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCcEEEEEEEecCCCcccCHhHHhhhhCCcc
Confidence 9876654 368899999999999999999886532 34689999999999997 99999999999999999
Q ss_pred cCccceEEEeecc
Q 004738 392 ANPQDILIFSKSS 404 (732)
Q Consensus 392 ANp~dil~f~k~~ 404 (732)
|||+|||+|||+|
T Consensus 460 anp~d~~~f~~~~ 472 (472)
T 4fbk_A 460 ANATDVVQFYLKK 472 (472)
T ss_dssp SCSSCSEEEECCC
T ss_pred cChhheeEEEeCc
Confidence 9999999999753
No 2
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=100.00 E-value=2e-81 Score=691.73 Aligned_cols=391 Identities=45% Similarity=0.817 Sum_probs=336.5
Q ss_pred CcCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccC
Q 004738 6 REDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (732)
Q Consensus 6 ~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~g 85 (732)
...+.++|||||+||+|||+...+..++.+.+.+|+++++.|++++||+||++|||||...|+..++..+++.|++||+|
T Consensus 7 ~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g 86 (417)
T 4fbw_A 7 ELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLG 86 (417)
T ss_dssp ---CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBS
T ss_pred CCCCCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhccc
Confidence 34567889999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceeeechhhhhc-ccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccc
Q 004738 86 DRPVQFQVVSDQAVNF-QNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGE 164 (732)
Q Consensus 86 d~p~~~e~lSd~~~~F-~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~ 164 (732)
|+||+||+|||++.+| .+.|.+|||||||++++||||+|+||||.+.+.+..+++++|..+|++++||... ..++
T Consensus 87 ~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~----~~~~ 162 (417)
T 4fbw_A 87 DKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVP----ENDN 162 (417)
T ss_dssp SCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC-------C
T ss_pred CCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcc----cCCc
Confidence 9999999999999999 5789999999999999999999999999999877678999999999999999853 3467
Q ss_pred eeEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCc
Q 004738 165 ITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (732)
Q Consensus 165 i~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~ 244 (732)
+.+.|+++++|.++++|||+||++++++.+++.+ ..+.+++|... ..+||||+|+||++.++++.+++++.+++.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~d~rl~r~~~~-~~v~~~~p~~~----~~~~~nIlvlH~~~~~~~~~~yip~~l~~~ 237 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVRDERLYHSFRE-NKVKFLRPDLY----RDEWFNLLTVHQNHSAHTPTSYLPESFIQD 237 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEEEEESTT----TTTSEEEEEEESCSSCSSSSSSCCGGGSCT
T ss_pred eeEEeEEEEecCceEEEEeccCCchhhhhhhhhh-hhhhhcCcccc----cCCceEEEEecCCccCCCCcccCchhHhhc
Confidence 8899999999999999999999999999988876 46777766421 368999999999999887788999999999
Q ss_pred CCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEECCCCCcEEEEEEEecc
Q 004738 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILKD 324 (732)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI~L~~ 324 (732)
++|||||||+|.+++.+...+..+.+++||||+++++++++|.++|+|+||+|+++.+++++|||.++|||++.+|+|++
T Consensus 238 ~~DyvalGH~H~~~~~~~~~~~~g~~i~~PGS~~~~s~~e~E~~~kg~~lvei~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 238 FYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp TCSEEEEESCCSCEEEEEEETTTTEEEEECCCSSCSSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEecCccccceeccccCCCCEEEEECCCCCcCCCccccCCCCEEEEEEEECCEEEEEEEECCCcccEEEEEEEeec
Confidence 99999999999998765444455689999999999999987788999999999999999999999999999999999999
Q ss_pred CCCCCC--CCHhHHHHHHHHHHHHHHHHhhhhccc---------cccCCCCeEEEEEEeec-ccccChhhhhhHHhhccc
Q 004738 325 EADIDP--DDQNSILEHLDKVVRNLIERSSKKTVN---------RSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVA 392 (732)
Q Consensus 325 ~~~~~~--~~~~ei~~~l~~~Ve~li~~a~~~~~~---------~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~g~VA 392 (732)
..++.+ .+.++|.++|.++|++||++|++++.. ..++++|||||||+||| |+++||+||||+|+||||
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~~f~~~~~~~va 397 (417)
T 4fbw_A 318 VSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVA 397 (417)
T ss_dssp CTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCTTSCCCCCCEEEEEEECTTTCCCCCHHHHHHTTTTTCS
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccCCCceeEEEEEecCCccccCHHHHHHhhccccc
Confidence 876654 368899999999999999999886532 34688999999999996 999999999999999999
Q ss_pred CccceEEEeeccc
Q 004738 393 NPQDILIFSKSSK 405 (732)
Q Consensus 393 Np~dil~f~k~~~ 405 (732)
||+|||+|||+|+
T Consensus 398 n~~d~~~~~~~~~ 410 (417)
T 4fbw_A 398 NATDVVQFYLKKV 410 (417)
T ss_dssp CTTCSEEEECC--
T ss_pred ChHHeeeeeeccC
Confidence 9999999998654
No 3
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-80 Score=681.97 Aligned_cols=392 Identities=50% Similarity=0.861 Sum_probs=334.9
Q ss_pred CCcCCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhcc
Q 004738 5 PREDIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCL 84 (732)
Q Consensus 5 ~~~~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~ 84 (732)
......++|||||+||+|||+...+..++.+.+.+|+++++.|.+++||+||++|||||...|+..++..++++|++||+
T Consensus 25 ~~~~~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 25 DALDDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCM 104 (431)
T ss_dssp --CCGGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHB
T ss_pred cCCCCCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhc
Confidence 34467789999999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeeechhhhhcc-cccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCcc
Q 004738 85 NDRPVQFQVVSDQAVNFQ-NKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVG 163 (732)
Q Consensus 85 gd~p~~~e~lSd~~~~F~-~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~ 163 (732)
||+||+||+|||++++|. +.|..+||+|||.+++||||+|+||||++.+.+.++++++|+.+|+++|||+.. .++
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~l~~~~lL~~~glv~~fg~~~----~~e 180 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADALCALDILSCAGFVNHFGRSM----SVE 180 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTTBCHHHHHHHHTSEEECCCCC----CSS
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccccCHHHHhccCCcEEEECCcC----ccc
Confidence 999999999999999998 479999999999999999999999999999888899999999999999999852 356
Q ss_pred ceeEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCC
Q 004738 164 EITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLP 243 (732)
Q Consensus 164 ~i~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp 243 (732)
.+.+.|+++++|.++++|||+||++++++.++|.. ..+.++.|... .++|+||+|+|+++...+...++++.+++
T Consensus 181 ~i~~~Pv~l~~g~~~valyGl~~~~~~~l~~~~~~-~~v~~~~p~~~----~~~~~~Ilv~H~~~~~~g~~~~ip~~l~~ 255 (431)
T 3t1i_A 181 KIDISPVLLQKGSTKIALYGLGSIPDERLYRMFVN-KKVTMLRPKED----ENSWFNLFVIHQNRSKHGSTNFIPEQFLD 255 (431)
T ss_dssp CEEECCEEEEETTEEEEEEEECCCCHHHHHHHHHT-TCEEECCCSSC----GGGEEEEEEECSCCSCSSSSSSCCGGGSC
T ss_pred ceeeEEEEEecCCEeEEEEeCCCCCHHHHhhhhcc-ccceeeccccc----CCCceEEEEECCCccCCCccccCCHhHhh
Confidence 78889999999999999999999999999988865 35777776421 25799999999998766677889999999
Q ss_pred cCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEECCCCCcEEEEEEEec
Q 004738 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEIILK 323 (732)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI~L~ 323 (732)
.++|||+|||+|.+++.+...+..+++++||||++++||+++|.++|+|+||+|+++.+++++|||.++|||++.+|+|+
T Consensus 256 ~~~Dyv~lGH~H~~~~~~~~~~~~~~~i~yPGS~~~~s~~e~E~~~k~~~lvei~~~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 256 DFIDLVIWGHEHECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp TTCCEEEECSCCSCEEEEEECTTTCCEEEECCCSSCCSCCHHHHSCCEEEEEEEETTEEEEEEEECSSSCCEEEEEEEGG
T ss_pred CCCCEEEecccccccccccccCCCCEEEEeCCCCcccCcCcccCCCCEEEEEEEECCEEEEEEEECCCcceEEEEEEEEe
Confidence 99999999999999876544444568999999999999998778899999999999999999999999999999999999
Q ss_pred cCCCC----CCCCHhHHHHHHHHHHHHHHHHhhhhcc-ccccCCCCeEEEEEEeec-ccccChhhhhhHHhhcccCccce
Q 004738 324 DEADI----DPDDQNSILEHLDKVVRNLIERSSKKTV-NRSELKLPLVRIKVDYSG-FMTINPQRFGQKYVGKVANPQDI 397 (732)
Q Consensus 324 ~~~~~----~~~~~~ei~~~l~~~Ve~li~~a~~~~~-~~~~~~~PLiRLrVd~sg-~~~~n~~rfgq~f~g~VANp~di 397 (732)
+..++ .+++.++|.++|.++|++||++|++++. ...++++|||||||+||| |+++||+||||+|+|+||||+||
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~plirl~v~~~~~~~~~n~~rf~~~~~~~van~~d~ 415 (431)
T 3t1i_A 336 NHPDIFNPDNPKVTQAIQSFCLEKIEEMLENAERERLGNSHQPEKPLVRLRVDYSGGFEPFSVLRFSQKFVDRVANPKDI 415 (431)
T ss_dssp GCTTTCCSSCTTHHHHHHHHHHHHHHHHHHHHHHHTTTCSSSCSSCEEEEEEECTTTCCCCCSHHHHHHHTTTCSCSSSS
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEEEecCCCCccCHHHHHHhhCCcccChHHe
Confidence 87543 3456789999999999999999987653 345789999999999998 99999999999999999999999
Q ss_pred EEEeeccc
Q 004738 398 LIFSKSSK 405 (732)
Q Consensus 398 l~f~k~~~ 405 (732)
|+|+|+++
T Consensus 416 ~~~~~~~~ 423 (431)
T 3t1i_A 416 IHFFRHRE 423 (431)
T ss_dssp EEEEC---
T ss_pred EEEEEecc
Confidence 99998654
No 4
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=100.00 E-value=2.5e-33 Score=298.49 Aligned_cols=284 Identities=26% Similarity=0.351 Sum_probs=195.8
Q ss_pred cEEEEEcCCCCCCCC-CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004738 13 VRILVATDCHLGYME-KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (732)
Q Consensus 13 mRILh~SD~HLG~~e-~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~ 91 (732)
|||+|+||+|+|+.. ..+.|.++.+.+|+++++.|++++||+||++|||||...|+..++..+.++|.++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~-------- 72 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPK-------- 72 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHH--------
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHH--------
Confidence 899999999999864 34567788889999999999999999999999999998898888888888887752
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeE----
Q 004738 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV---- 167 (732)
Q Consensus 92 e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i---- 167 (732)
..++|||+|+||||.+.+. .++.++|...|+|++++...-.- ....+..
T Consensus 73 ------------------------~~~~~v~~v~GNHD~~~~~--~~~~~~l~~~g~v~vl~~~~~~~-~~~~~~~~~~~ 125 (333)
T 1ii7_A 73 ------------------------EHSIPVFAIEGNHDRTQRG--PSVLNLLEDFGLVYVIGMRKEKV-ENEYLTSERLG 125 (333)
T ss_dssp ------------------------TTTCCEEEECCTTTCCSSS--CCHHHHHHHTTSCEECEEESSCC-CSSSEEEEECT
T ss_pred ------------------------HCCCcEEEeCCcCCCccCC--cCHHHHHHHcCCcEEeccccccc-ccceeeecccC
Confidence 3478999999999997543 35678899999888887421000 0001111
Q ss_pred -EEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHh-hcChhhhhhccCCCceEEEEEcccCCCCC---C--ccccccc
Q 004738 168 -YPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQ-WMRPEAQEECQVSDWFNILVLHQNRVKTN---P--KNAINEH 240 (732)
Q Consensus 168 -~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~-~l~P~~~~~~~~~~~fnILvlHqn~~~~~---~--~~~I~e~ 240 (732)
.|+++......++|||++|.....+.... ..+. .+. .+..||+|+|+++.+.. . ...+...
T Consensus 126 ~~~~~~~~~~~~v~i~g~~~~~~~~~~~~~---~~l~~~~~---------~~~~~Ill~H~~~~~~~~~~~~~~~~~~~~ 193 (333)
T 1ii7_A 126 NGEYLVKGVYKDLEIHGMKYMSSAWFEANK---EILKRLFR---------PTDNAILMLHQGVREVSEARGEDYFEIGLG 193 (333)
T ss_dssp TSCEEEEEEETTEEEEEECCCCHHHHHSST---THHHHHCC---------CCSSEEEEEECCBHHHHHTTTCCCCSBCGG
T ss_pred CCceeeccCcCCEEEEecCCcCHHHHHHHH---HHHHHhhC---------CCCCeEEEEcCChhhcccccccccceecHH
Confidence 12222211146899999997655432210 0011 111 23359999999875321 1 1223344
Q ss_pred cCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccC--------------ccCCCeEEEEEEeCCeeEEEE
Q 004738 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG--------------ESKPKHVLLLEIKENQYRPTK 306 (732)
Q Consensus 241 lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~eg--------------E~~~Kgv~LLeI~~~~~~ve~ 306 (732)
.++.+||||||||+|.+++. ...+..++||||+.+++|+|. +..+|||++|+ .+++++
T Consensus 194 ~l~~~~dyvalGH~H~~q~~----~~~~~~i~ypGS~~~~~~~E~~~~~~~~G~~~~p~~~~~kg~~lv~----~~~~~~ 265 (333)
T 1ii7_A 194 DLPEGYLYYALGHIHKRYET----SYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVE----DFKPRF 265 (333)
T ss_dssp GSCTTCSEEEEESCSSCEEE----EETTEEEEECCCSSCCSGGGCSEEEEECSSSEEEEECCCCEEEEEE----TTEEEE
T ss_pred HCCccCCEEEccccccceec----CCCCceEEEcCCCeecccchhccccccccccccccccCCCeEEEEe----cCceeE
Confidence 55678999999999998653 222468999999999999873 23489999999 378999
Q ss_pred EECCCCCcEEEEEEEeccCCCCCCCCHhHHHHHHHHHHHHHHHHhhhhccccccCCCCeEEEEEEeec
Q 004738 307 IPLTSVRPFEYTEIILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVDYSG 374 (732)
Q Consensus 307 IpL~tvRpf~~~eI~L~~~~~~~~~~~~ei~~~l~~~Ve~li~~a~~~~~~~~~~~~PLiRLrVd~sg 374 (732)
+||.+ |||+..++. . +.+++ .+.+++++.. ..+.+++||++.+..
T Consensus 266 i~l~~-r~~~~~~i~--~-------~~~~l----~~~~~~~~~~---------~~~~~~v~v~l~~~~ 310 (333)
T 1ii7_A 266 VEIKV-RPFIDVKIK--G-------SEEEI----RKAIKRLIPL---------IPKNAYVRLNIGWRK 310 (333)
T ss_dssp EECCC-CCEEEEEEE--E-------CHHHH----HHHHHHHGGG---------SCTTCEEEEEEEESS
T ss_pred EECCC-CceEEEEec--C-------CHHHH----HHHHHHHhhc---------CCCCcEEEEEEEecC
Confidence 99998 999876664 1 12223 3334433321 124689999998764
No 5
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=100.00 E-value=2.9e-32 Score=296.54 Aligned_cols=278 Identities=22% Similarity=0.316 Sum_probs=192.5
Q ss_pred CCCCccEEEEEcCCCCCCCCCc-hhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCC
Q 004738 8 DIANTVRILVATDCHLGYMEKD-EIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (732)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d-~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd 86 (732)
....+|||+|+||+|+|....+ ..|..+.+.+|+++++.|++++||+||++|||||...|+..++..++++|+++.
T Consensus 16 ~~~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~--- 92 (386)
T 3av0_A 16 PRGSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLH--- 92 (386)
T ss_dssp --CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHH---
T ss_pred cCCCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH---
Confidence 3467899999999999976443 346677889999999999999999999999999999998888778888887762
Q ss_pred CCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCcccee
Q 004738 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEIT 166 (732)
Q Consensus 87 ~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~ 166 (732)
..++|||+|+||||.+......++..+|... +++|+.
T Consensus 93 -----------------------------~~~~pv~~v~GNHD~~~~~~~~~~~~~l~~~--v~~l~~------------ 129 (386)
T 3av0_A 93 -----------------------------ENNIKVYIVAGNHEMPRRLGEESPLALLKDY--VKILDG------------ 129 (386)
T ss_dssp -----------------------------HTTCEEEECCCGGGSCSSTTSCCGGGGGTTT--CEECSE------------
T ss_pred -----------------------------hcCCcEEEEcCCCCCCccccccCHHHHHHHH--eEEcCC------------
Confidence 2478999999999998765433444555443 666643
Q ss_pred EEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCcc-ccccccCCcC
Q 004738 167 VYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKN-AINEHFLPRF 245 (732)
Q Consensus 167 i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~-~I~e~lLp~~ 245 (732)
.++.+. +...+.|+|++|........+. ..+.++.+.. ..+.++|+++|++..+..+.. .+....++.
T Consensus 130 -~~v~~~-~~~~v~i~gl~~~~~~~~~~~~---~~l~~l~~~~-----~~~~~~Ill~H~~~~~~~~~~~~~~~~~l~~- 198 (386)
T 3av0_A 130 -KDVINV-NGEEIFICGTYYHKKSKREEML---DKLKNFESEA-----KNYKKKILMLHQGINPYIPLDYELEHFDLPK- 198 (386)
T ss_dssp -EEEEEE-TTEEEEEEEECCCCSTTHHHHH---HHHHHHHHHH-----HTCSSEEEEECCCCTTTSSSSCSSCGGGSCC-
T ss_pred -CcEEEe-CCCCEEEEeCCCCCHHHHHHHH---HHHHHhhhhc-----ccCCCEEEEECcCccccCCCCcccCHHHhhh-
Confidence 123332 3467999999997643222221 1122222211 136799999999875432211 133334555
Q ss_pred CCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCcc---CCCeEEEEEEeC---CeeEEEEEECCCCCcEEEEE
Q 004738 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGES---KPKHVLLLEIKE---NQYRPTKIPLTSVRPFEYTE 319 (732)
Q Consensus 246 ~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~---~~Kgv~LLeI~~---~~~~ve~IpL~tvRpf~~~e 319 (732)
+|||++||+|.++.. +..+..++||||+.++++.+.+. .+|+|++|++++ +.++++++++ ..||| .+
T Consensus 199 ~d~v~~GH~H~~~~~----~~~~~~i~ypGS~~~~~~~e~~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l-~~r~~--~~ 271 (386)
T 3av0_A 199 FSYYALGHIHKRILE----RFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDI-ECREF--VE 271 (386)
T ss_dssp CSEEEECSCCSCEEE----ECSSSEEEECCCSSCCSGGGTHHHHHHCSEEEEEECCSSSCCGGGEEEEEC-CCCCE--EE
T ss_pred CCeEEccCCCCCccc----cCCCceEEECCcccccCcchhccccCCCCEEEEEEEecCcCCCceEEEEEC-Cccee--EE
Confidence 999999999997432 22346899999999999975321 579999999988 6789999999 57998 56
Q ss_pred EEeccCCCCCCCCHhHHHHHHHHHHHHHHHHhhhhccccccCCCCeEEEEEE
Q 004738 320 IILKDEADIDPDDQNSILEHLDKVVRNLIERSSKKTVNRSELKLPLVRIKVD 371 (732)
Q Consensus 320 I~L~~~~~~~~~~~~ei~~~l~~~Ve~li~~a~~~~~~~~~~~~PLiRLrVd 371 (732)
+.+.+. +++.+ ++++... ..+.++|||+|.
T Consensus 272 ~~~~~~--------~~~~~--------~~~~~~~------~~~~~~v~l~l~ 301 (386)
T 3av0_A 272 VNIKDK--------KSFNE--------AVNKIER------CKNKPVVFGKIK 301 (386)
T ss_dssp EEECSH--------HHHHH--------HHHHHTS------SSSCCEEEEEEE
T ss_pred EeCCCh--------hhHHH--------HHHHHHh------CCCCcEEEEEEE
Confidence 654431 23322 2222211 235789999999
No 6
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.97 E-value=1.6e-30 Score=276.53 Aligned_cols=259 Identities=22% Similarity=0.262 Sum_probs=173.9
Q ss_pred CCCccEEEEEcCCCCC----CCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCC-CCCCCCCChhHHHHHHHHHHHhc
Q 004738 9 IANTVRILVATDCHLG----YMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGD-LFHENKPSRSTLVKAIEILRRHC 83 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG----~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGD-LFh~~kPs~~tl~~~~elLr~l~ 83 (732)
...+|||||+|||||| ....+..|.++...+|+++++.|++++||+||++|| |||...|+..++..+.++|+++.
T Consensus 15 ~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 15 NLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp TCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHH
Confidence 4578999999999999 444455677788899999999999999999999999 99999999887777788887752
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCC-ceEEccceeecCCCc
Q 004738 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN-LVNYFGKMVLGGSGV 162 (732)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~g-lVn~FGk~~l~~~~~ 162 (732)
.. +|||+|+||||.+. .. ....++...| ++++++...
T Consensus 95 --------------------------------~~-~pv~~i~GNHD~~~-~~--~~~~~l~~~g~nv~v~~~~~------ 132 (336)
T 2q8u_A 95 --------------------------------RT-APVVVLPGNHDWKG-LK--LFGNFVTSISSDITFVMSFE------ 132 (336)
T ss_dssp --------------------------------HH-SCEEECCC-------CH--HHHHHHHHHCSSEEECCSSS------
T ss_pred --------------------------------hc-CCEEEECCCCCccc-cc--cHHHHHHhcCCEEEEEeccc------
Confidence 22 89999999999876 32 2234555444 477776531
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcCh--hhHhhcChhhhhhccCCCceEEEEEcccCCCCCC---c---
Q 004738 163 GEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTP--HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP---K--- 234 (732)
Q Consensus 163 ~~i~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~--~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~---~--- 234 (732)
.+ .|+.+. ...+.+||++|.....+...+... ..+.++...........+.++|+++|++..+... .
T Consensus 133 -~~--~~~~~~--~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~ 207 (336)
T 2q8u_A 133 -PV--DVEAKR--GQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQG 207 (336)
T ss_dssp -CE--EEECTT--SCEEEEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------
T ss_pred -cc--CceEEe--CCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccch
Confidence 11 133332 346999999998764432211110 0122221111100002467999999998765321 1
Q ss_pred --cccccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCC-eeEEEEEECCC
Q 004738 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKEN-QYRPTKIPLTS 311 (732)
Q Consensus 235 --~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~-~~~ve~IpL~t 311 (732)
..++..+++.++|||++||+|.++.. .+ +..++||||+.++++++. ..+|+|++|+++++ .++++++|+..
T Consensus 208 ~~~~v~~~l~~~~~d~v~~GH~H~~~~~----~~-~~~i~y~GS~~~~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~ 281 (336)
T 2q8u_A 208 REIIINRALIPSVVDYAALGHIHSFREI----QK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERIDASP 281 (336)
T ss_dssp CCCEECGGGSCTTSSEEEEESCSSCEEE----EE-TTEEEECCCSSCCSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC
T ss_pred hhcccCHHHccccCCEEEEccccCceEe----CC-CccEEECCCCcCCCcccc-CCCCEEEEEEEeCCCccEEEEEECCC
Confidence 12445667778999999999997653 22 247999999999999752 34899999999976 48999999998
Q ss_pred CCcEEEEEEE
Q 004738 312 VRPFEYTEII 321 (732)
Q Consensus 312 vRpf~~~eI~ 321 (732)
|||...++.
T Consensus 282 -r~~~~~~~~ 290 (336)
T 2q8u_A 282 -LPLKTLYYK 290 (336)
T ss_dssp -CCEEEEEEE
T ss_pred -EEEEEeecc
Confidence 999977763
No 7
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.97 E-value=7e-31 Score=285.58 Aligned_cols=250 Identities=23% Similarity=0.322 Sum_probs=174.9
Q ss_pred cEEEEEcCCCCCCC----CCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCC-CCCCCChhHHHHHHHHHHHhccCCC
Q 004738 13 VRILVATDCHLGYM----EKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLF-HENKPSRSTLVKAIEILRRHCLNDR 87 (732)
Q Consensus 13 mRILh~SD~HLG~~----e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLF-h~~kPs~~tl~~~~elLr~l~~gd~ 87 (732)
|||||+||||||.. ..+..+..+...+|+++++.+.+++||+||++|||| |...|+..++..+.+.|.++.
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~---- 76 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMM---- 76 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHH----
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHH----
Confidence 89999999999987 555567778889999999999999999999999999 778888887777777777652
Q ss_pred CcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhh--hCCceEEccceeecCCCccce
Q 004738 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS--ACNLVNYFGKMVLGGSGVGEI 165 (732)
Q Consensus 88 p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~--~~glVn~FGk~~l~~~~~~~i 165 (732)
.. +|||+|+||||... +..+..+. .+..+.++..
T Consensus 77 ----------------------------~~-~~v~~i~GNHD~~~----~~~~~~~~~~~~~~~~~~~~----------- 112 (379)
T 3tho_B 77 ----------------------------RT-APVVVLPGNQDWKG----LKLFGNFVTSISSDITFVMS----------- 112 (379)
T ss_dssp ----------------------------HH-SCEEECCCTTSCTT----HHHHHHHHHTTCSSEEECCS-----------
T ss_pred ----------------------------hC-CCEEEEcCCCcccc----CccccccccccCCcceeecc-----------
Confidence 23 89999999999532 11122221 1234444322
Q ss_pred eEEEEEEee-CCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhh----hhccCCCceEEEEEcccCCCCCC----c--
Q 004738 166 TVYPILIRK-GSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQ----EECQVSDWFNILVLHQNRVKTNP----K-- 234 (732)
Q Consensus 166 ~i~Pvll~k-G~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~----~~~~~~~~fnILvlHqn~~~~~~----~-- 234 (732)
..|+.+.. .+..+.|||++|.........+.. ....|+..... ... ..+.++|+|+|+.+.+..+ .
T Consensus 113 -~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~-~~~~~~I~l~H~~v~g~~~~~~se~~ 189 (379)
T 3tho_B 113 -FEPVDVEAKRGQKVRILPFPYPDESEALRKNEG-DFRFFLESRLNKLYEEAL-KKEDFAIFMGHFTVEGLAGYAGIEQG 189 (379)
T ss_dssp -SCCEEEECTTCCEEEEEEECCCCCC----CHHH-HHHHHHHHHHHHHHHHHH-TCSSEEEEEEESCBSCCCC-------
T ss_pred -cceEEEEcCCCCEEEEEECCCCCHHHHhhhhcc-chHHHHHHHHHHHHHHhc-CCCCCeEEEEeccccCCccCCCCccc
Confidence 13555553 334799999999865332221111 11222211110 001 2578999999999876433 1
Q ss_pred --cccccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCe-eEEEEEECCC
Q 004738 235 --NAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQ-YRPTKIPLTS 311 (732)
Q Consensus 235 --~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~-~~ve~IpL~t 311 (732)
..++..+++.++||||+||+|.++ .+.+ +.+++||||+++++|+|. ..+|+|++|++++++ +++++|| ..
T Consensus 190 ~~~~v~~~~~~~~~dyvalGH~H~~q----~~~~-~~~i~y~GS~~~~~f~E~-~~~k~~~lv~~~~~~~~~v~~i~-~~ 262 (379)
T 3tho_B 190 REIIINRALIPSVVDYAALGHIHSFR----EIQK-QPLTIYPGSLIRIDFGEE-ADEKGAVFVELKRGEPPRYERID-AS 262 (379)
T ss_dssp CSCCBCGGGSCTTSSEEEEESCSSCE----EEEE-TTEEEECCCSSCCSGGGS-SSCCEEEEEECCSSSCCEEEEEE-CC
T ss_pred cccccCHHHcCcCCCEEEcccccCCe----EeCC-CCcEEecCCCCCCCcccc-cCCCEEEEEEEcCCCcceEEEeC-CC
Confidence 134566778899999999999974 3433 258999999999999862 458999999998654 7999999 77
Q ss_pred CCcEEEEEE
Q 004738 312 VRPFEYTEI 320 (732)
Q Consensus 312 vRpf~~~eI 320 (732)
.|||...++
T Consensus 263 ~r~~~~~~~ 271 (379)
T 3tho_B 263 PLPLKTLYY 271 (379)
T ss_dssp CCCEEEEEC
T ss_pred CeeeEEEEc
Confidence 899986665
No 8
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.81 E-value=1.2e-19 Score=183.93 Aligned_cols=242 Identities=17% Similarity=0.218 Sum_probs=140.6
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~ 90 (732)
|||+|+||+|++..........+...+|+++++.+.+. ++|+||++|||++...+ ..+..+.++|+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~---------- 68 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP--EEYQVARQILG---------- 68 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH--HHHHHHHHHHT----------
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHH----------
Confidence 79999999999964332222256778999999999886 68999999999987643 23333344332
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeEEEE
Q 004738 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (732)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i~Pv 170 (732)
..++|+|+|+||||..... ...|... ++... .. .+... .
T Consensus 69 -------------------------~l~~p~~~v~GNHD~~~~~-----~~~~~~~----~~~~~---~~-~~~~~---~ 107 (274)
T 3d03_A 69 -------------------------SLNYPLYLIPGNHDDKALF-----LEYLQPL----CPQLG---SD-ANNMR---C 107 (274)
T ss_dssp -------------------------TCSSCEEEECCTTSCHHHH-----HHHHGGG----SGGGC---SC-GGGCC---E
T ss_pred -------------------------hcCCCEEEECCCCCCHHHH-----HHHhhhh----hcCcc---cC-CCceE---E
Confidence 2368999999999975321 1223221 11000 00 00000 1
Q ss_pred EEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCc--c--ccc-----ccc
Q 004738 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--N--AIN-----EHF 241 (732)
Q Consensus 171 ll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~--~--~I~-----e~l 241 (732)
.+.. ..+.++|+...........+. ...+.|+...... ..+...|+++|++....... . .+. ..+
T Consensus 108 ~~~~--~~~~~i~ld~~~~~~~~~~~~-~~~~~wl~~~l~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~ 181 (274)
T 3d03_A 108 AVDD--FATRLLFIDSSRAGTSKGWLT-DETISWLEAQLFE---GGDKPATIFMHHPPLPLGNAQMDPIACENGHRLLAL 181 (274)
T ss_dssp EECS--SSSEEEECCCCCTTCSSBCCC-HHHHHHHHHHHHH---HTTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHH
T ss_pred EEEe--CCEEEEEEeCCCCCCCCCeeC-HHHHHHHHHHHHh---CCCCCEEEEECCCCcccCCcccCcccCcCHHHHHHH
Confidence 1222 246677776542110000011 1234555433221 13568999999986543210 0 010 123
Q ss_pred CC-c-CCCEEEeCcccccccCCcccCCCCceEecCCCCccccccc------CccCCCeEEEEEEeCCeeEEEEEEC---C
Q 004738 242 LP-R-FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIE------GESKPKHVLLLEIKENQYRPTKIPL---T 310 (732)
Q Consensus 242 Lp-~-~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~e------gE~~~Kgv~LLeI~~~~~~ve~IpL---~ 310 (732)
+. . .+|+|++||+|..+.. ...+ ...+++||+.....+.. ....+++|.++++.++.+.++.+++ .
T Consensus 182 l~~~~~v~~vl~GH~H~~~~~--~~~g-~~~~~~pg~~~~~~~~~~~~~~~~~~~~~gy~i~~i~~~~~~~~~~~~~~~~ 258 (274)
T 3d03_A 182 VERFPSLTRIFCGHNHSLTMT--QYRQ-ALISTLPGTVHQVPYCHADTDPYYDLSPASCLMHRQVGEQWVSYQHSLAHYA 258 (274)
T ss_dssp HHHCTTEEEEEECSSSSCEEE--EETT-EEEEECCCSSCBCCCCSSCCSCEEBCCCCEEEEEEEETTEEEEEEEECSCCS
T ss_pred HHhCCCceEEEeCCCCCchhh--eECC-EEEEEcCCcceeeccCCCccccccccCCCceEEEEEeCCcEEEEEEecCCCC
Confidence 32 2 5899999999997653 2222 25788999986544321 1235789999999998888888777 3
Q ss_pred CCCcEE
Q 004738 311 SVRPFE 316 (732)
Q Consensus 311 tvRpf~ 316 (732)
.++||.
T Consensus 259 ~~~~f~ 264 (274)
T 3d03_A 259 GPWLYD 264 (274)
T ss_dssp CCEECC
T ss_pred CCCCcc
Confidence 455654
No 9
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.79 E-value=3.9e-19 Score=185.26 Aligned_cols=243 Identities=16% Similarity=0.161 Sum_probs=141.8
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccC
Q 004738 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLN 85 (732)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e--~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~g 85 (732)
.....|||+|+||+|++..........+....|+++++.+.+ .+||+||++|||++...+ ..+..+.++|+.+.
T Consensus 21 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~--~~~~~~~~~l~~l~-- 96 (330)
T 3ib7_A 21 HPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP--AAYRKLRGLVEPFA-- 96 (330)
T ss_dssp SCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH--HHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH--HHHHHHHHHHHHHH--
Confidence 445689999999999987654433344678899999999988 899999999999997654 34445555555431
Q ss_pred CCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccce
Q 004738 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (732)
Q Consensus 86 d~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i 165 (732)
...++|||+|+||||.... ....+.... ..++..
T Consensus 97 -----------------------------~~~~~pv~~v~GNHD~~~~-----~~~~~~~~~--~~~~~~---------- 130 (330)
T 3ib7_A 97 -----------------------------AQLGAELVWVMGNHDDRAE-----LRKFLLDEA--PSMAPL---------- 130 (330)
T ss_dssp -----------------------------HHHTCEEEECCCTTSCHHH-----HHHHHHCCC--CCCSCC----------
T ss_pred -----------------------------hhcCCCEEEeCCCCCCHHH-----HHHHhcccc--cccCCc----------
Confidence 0237899999999997421 111221111 001100
Q ss_pred eEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCc--cc-------
Q 004738 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPK--NA------- 236 (732)
Q Consensus 166 ~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~--~~------- 236 (732)
...+..++ +.++++...........+ ....+.|+...... ......|+++|+........ ..
T Consensus 131 ---~~~~~~~~--~~~i~lds~~~~~~~~~~-~~~q~~wl~~~l~~---~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~ 201 (330)
T 3ib7_A 131 ---DRVCMIDG--LRIIVLDTSVPGHHHGEI-RASQLGWLAEELAT---PAPDGTILALHHPPIPSVLDMAVTVELRDQA 201 (330)
T ss_dssp ---CEEEEETT--EEEEECCCCCTTCCSBCC-CHHHHHHHHHHTTS---CCTTCEEEECSSCSSCCSSGGGGGGSBSCHH
T ss_pred ---ceEEEeCC--EEEEEecCCCCCCCCCcc-CHHHHHHHHHHHHh---cccCCeEEEEECCCCCCCccccccccccCHH
Confidence 01122222 233333321100000000 01234555433211 12334899999876543210 00
Q ss_pred -cccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCccccc-------ccCccCCCeEEEEEEeCCeeEEEEEE
Q 004738 237 -INEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSL-------IEGESKPKHVLLLEIKENQYRPTKIP 308 (732)
Q Consensus 237 -I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~-------~egE~~~Kgv~LLeI~~~~~~ve~Ip 308 (732)
+.+.+....+|+|++||+|..... ... +..+++|||+..... ..++..+++|.+|+|.++++.+++++
T Consensus 202 ~l~~~l~~~~v~~v~~GH~H~~~~~--~~~--g~~~~~~gs~~~~~~~~~~~g~~~~~~~~~gy~iv~i~~~~~~~~~v~ 277 (330)
T 3ib7_A 202 ALGRVLRGTDVRAILAGHLHYSTNA--TFV--GIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIP 277 (330)
T ss_dssp HHHHHHTTSSEEEEEECSSSSCEEE--EET--TEEEEECCCSSCEECTTSCTTCCCEESCSCEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHhccCceEEEECCCCCcccc--eEC--CEEEEecCcceeccCCCCCCcceeccCCCCceEEEEEECCCeEEEEec
Confidence 111223357999999999997642 222 467788888763211 01124578999999999999999999
Q ss_pred CCCCC
Q 004738 309 LTSVR 313 (732)
Q Consensus 309 L~tvR 313 (732)
+....
T Consensus 278 ~~~~~ 282 (330)
T 3ib7_A 278 LGGGE 282 (330)
T ss_dssp CSCCC
T ss_pred cCCCC
Confidence 87533
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.76 E-value=4.2e-18 Score=167.65 Aligned_cols=202 Identities=16% Similarity=0.211 Sum_probs=115.6
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~ 90 (732)
.+|||+|+||+|+++ ..|+++++.+.++++|+||++|||++...+ ...+..+++.|.
T Consensus 4 ~~mri~~iSD~H~~~------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~-~~~~~~~~~~l~---------- 60 (228)
T 1uf3_A 4 TVRYILATSNPMGDL------------EALEKFVKLAPDTGADAIALIGNLMPKAAK-SRDYAAFFRILS---------- 60 (228)
T ss_dssp CCCEEEEEECCTTCH------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCC-HHHHHHHHHHHG----------
T ss_pred ceEEEEEEeeccCCH------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCC-HHHHHHHHHHHH----------
Confidence 469999999999973 357888998888899999999999987643 233333333332
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhh--------CCceEEccceeecCCCc
Q 004738 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSA--------CNLVNYFGKMVLGGSGV 162 (732)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~--------~glVn~FGk~~l~~~~~ 162 (732)
..++|||+|+||||.+.. +.+.. ++.....+.
T Consensus 61 -------------------------~~~~pv~~v~GNHD~~~~-------~~~~~~~~~~~~~~~~~~l~~~-------- 100 (228)
T 1uf3_A 61 -------------------------EAHLPTAYVPGPQDAPIW-------EYLREAANVELVHPEMRNVHET-------- 100 (228)
T ss_dssp -------------------------GGCSCEEEECCTTSCSHH-------HHHHHHHHHHHHCTTEEECBTS--------
T ss_pred -------------------------hcCCcEEEECCCCCchhH-------HHHHhhhhhhccCcceEEcccc--------
Confidence 236899999999998642 12211 122221111
Q ss_pred cceeEEEEEEeeCCeeEEEEecCCCc-------HHHHHhh--hcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCC
Q 004738 163 GEITVYPILIRKGSTAVALYGLGNIR-------DERLNRM--FQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNP 233 (732)
Q Consensus 163 ~~i~i~Pvll~kG~t~vaLyGLg~ir-------derL~~~--f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~ 233 (732)
.+.+ + ..+.++|+++.. ++.+.+. +......+|+.. ..+..+|++.|++......
T Consensus 101 ------~~~~--~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~il~~H~p~~~~~~ 164 (228)
T 1uf3_A 101 ------FTFW--R-GPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWE-------LKDYPKIFLFHTMPYHKGL 164 (228)
T ss_dssp ------EEEE--T-TTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-------SCSCCEEEEESSCBCBTTT
T ss_pred ------eEee--C-CCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHh-------CCCCCeEEEEccCcccCCc
Confidence 1111 1 135666665321 1110000 000000122221 1235899999998653211
Q ss_pred c----cccccccC-CcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEE
Q 004738 234 K----NAINEHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIP 308 (732)
Q Consensus 234 ~----~~I~e~lL-p~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~Ip 308 (732)
. ..+ ..++ ...+|||++||+|..+ ... + +..+++|||.. ..+|+++++++ .+++++.
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~GH~H~~~---~~~-~-~~~~in~Gs~~----------~~~~~i~~~~~--~~~~~~~ 226 (228)
T 1uf3_A 165 NEQGSHEV-AHLIKTHNPLLVLVAGKGQKH---EML-G-ASWVVVPGDLS----------EGEYSLLDLRA--RKLETGN 226 (228)
T ss_dssp BTTSBHHH-HHHHHHHCCSEEEECCSSCEE---EEE-T-TEEEEECCBGG----------GTEEEEEETTT--TEEEEEE
T ss_pred cccCHHHH-HHHHHHhCCCEEEEcccccCc---ccc-C-CceEEEecccC----------CCceEEEEecc--eEeeecc
Confidence 0 011 1122 3469999999999432 122 2 46789999863 35799999875 5566555
Q ss_pred C
Q 004738 309 L 309 (732)
Q Consensus 309 L 309 (732)
+
T Consensus 227 v 227 (228)
T 1uf3_A 227 V 227 (228)
T ss_dssp C
T ss_pred c
Confidence 4
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.73 E-value=9.4e-18 Score=169.63 Aligned_cols=44 Identities=9% Similarity=0.288 Sum_probs=38.0
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENK 66 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~k 66 (732)
.+|||+|+||+|+++. .|+++++.+.+.+||+||++|||++...
T Consensus 4 ~~mri~~iSDlH~~~~------------~~~~~l~~~~~~~~D~vi~~GDl~~~~~ 47 (260)
T 2yvt_A 4 MPRKVLAIKNFKERFD------------LLPKLKGVIAEKQPDILVVVGNILKNEA 47 (260)
T ss_dssp CCCEEEEEECCTTCGG------------GHHHHHHHHHHHCCSEEEEESCCCCCHH
T ss_pred ceEEEEEEeecCCChH------------HHHHHHHHHHhcCCCEEEECCCCCCccC
Confidence 4699999999999842 4788888888899999999999999753
No 12
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.68 E-value=2e-16 Score=155.60 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=51.6
Q ss_pred cCCCEEEeCcccccccCCcccCCCCceEecCCCCccc-ccccCccCCCeEEEEEEeCCeeEEEEEECCCCCcEEEEEEE
Q 004738 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVAT-SLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEII 321 (732)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vat-S~~egE~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI~ 321 (732)
..+|+|++||+|..... .. .+..+++|||.... ...+ ...+++|++|+++++.++++.+++..-+ +....++
T Consensus 116 ~~~d~vi~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~il~~~~~~~~~~~~~~~~~~-~~v~~~~ 188 (192)
T 1z2w_A 116 FDVDILISGHTHKFEAF--EH--ENKFYINPGSATGAYNALE-TNIIPSFVLMDIQASTVVTYVYQLIGDD-VKVERIE 188 (192)
T ss_dssp HSSSEEECCSSCCCEEE--EE--TTEEEEECCCTTCCCCSSC-SCCCCEEEEEEEETTEEEEEEEEEETTE-EEEEEEE
T ss_pred cCCCEEEECCcCcCccE--eE--CCEEEEECCcccccCCCCC-cCCCCcEEEEEEECCEEEEEEEEccCCE-EEEEEEE
Confidence 46899999999997542 22 24689999998542 2111 2346899999999999999999997654 4444444
No 13
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.68 E-value=3.8e-16 Score=156.72 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=63.6
Q ss_pred CceEEEEEcccCCCCC-CccccccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCccc-ccccCccCCCeEEE
Q 004738 217 DWFNILVLHQNRVKTN-PKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVAT-SLIEGESKPKHVLL 294 (732)
Q Consensus 217 ~~fnILvlHqn~~~~~-~~~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vat-S~~egE~~~Kgv~L 294 (732)
+.++|+++|+...... ....+...+....+|||++||+|.+... .. .+..+++|||.... ...+ ...+++|++
T Consensus 112 ~~~~i~l~Hg~~~~~~~~~~~l~~~~~~~~~d~vl~GHtH~~~~~--~~--~~~~~inpGS~~~~~~~~~-~~~~~~y~i 186 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVF--EK--NGKLFLNPGTATGAFSALT-PDAPPSFML 186 (215)
T ss_dssp TTEEEEEECSTTSSSTTCHHHHHHHHHHHTCSEEEECSSCCCEEE--EE--TTEEEEECCCSSCCCCTTS-TTCCCEEEE
T ss_pred CCeEEEEEcCCccCCCCCHHHHHHHHhhcCCCEEEECCcCCCccE--ee--CCEEEEECCcccccCCCCC-CCCCCcEEE
Confidence 3478999997542210 0111111111346999999999997542 22 24689999998542 2111 234689999
Q ss_pred EEEeCCeeEEEEEECCCCCcEEEEEEEe
Q 004738 295 LEIKENQYRPTKIPLTSVRPFEYTEIIL 322 (732)
Q Consensus 295 LeI~~~~~~ve~IpL~tvRpf~~~eI~L 322 (732)
|++.++.++++.+++..-+ +.+..++.
T Consensus 187 l~i~~~~i~~~~~~~~~~~-~~v~~~~~ 213 (215)
T 2a22_A 187 MALQGNKVVLYVYDLRDGK-TNVAMSEF 213 (215)
T ss_dssp EEEETTEEEEEEEEEETTE-EEEEEEEE
T ss_pred EEEeCCcEEEEEEEecCCe-EEEEEEEe
Confidence 9999999999999997643 55555543
No 14
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.65 E-value=4.1e-15 Score=162.95 Aligned_cols=249 Identities=19% Similarity=0.175 Sum_probs=135.1
Q ss_pred CCCCccEEEEEcCCCCCCCCCc---h-----------hchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHH
Q 004738 8 DIANTVRILVATDCHLGYMEKD---E-----------IRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLV 73 (732)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d---~-----------~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~ 73 (732)
....+|||+|+||+|++..... . .........|+.+++.+.+.+||+||++|||++...+ ....
T Consensus 35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~--~~~~ 112 (443)
T 2xmo_A 35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK--TSHE 112 (443)
T ss_dssp CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH--HHHH
T ss_pred cCCCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH--HHHH
Confidence 3457799999999999854210 0 0011357789999999999999999999999987643 2334
Q ss_pred HHHHHHHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCC------------chH--
Q 004738 74 KAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDN------------LSA-- 139 (732)
Q Consensus 74 ~~~elLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~------------lsa-- 139 (732)
.+.+.|+.+. ..++||++|+||||....... +++
T Consensus 113 ~~~~~l~~l~--------------------------------~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~ 160 (443)
T 2xmo_A 113 ELAKKLTQVE--------------------------------KNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD 160 (443)
T ss_dssp HHHHHHHHHH--------------------------------HTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHH
T ss_pred HHHHHHHHHH--------------------------------hCCCeEEEECCcCCCCCccccccCCcccccccccCHHH
Confidence 4455555431 237899999999998653211 011
Q ss_pred -HHhhhhCCceEEccceeecCCCccceeEEEEEEeeCCeeEEEEecCCCcHH--HH------HhhhcChhhHhhcChhhh
Q 004738 140 -VDILSACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDE--RL------NRMFQTPHAVQWMRPEAQ 210 (732)
Q Consensus 140 -ldiL~~~glVn~FGk~~l~~~~~~~i~i~Pvll~kG~t~vaLyGLg~irde--rL------~~~f~~~~~v~~l~P~~~ 210 (732)
..++...|+...+... .... +..+. ....+.|+|+...... .. ...+. ...+.|+.....
T Consensus 161 ~~~~~~~~~~~~~~~~~------~~~~---~y~~~-~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~-~~ql~wL~~~L~ 229 (443)
T 2xmo_A 161 FSKIYSDFGYEDAISSD------EFSL---SYLAA-PSSKVWLLMLDTAIYKTNMQQGNPTTEGGLT-AGTLDWIKESSA 229 (443)
T ss_dssp HHHHTCCCCCTTCSEEC------SSSS---CEEEC-SBSSEEEEECCCBCCTTHHHHTSCCCCBCCC-HHHHHHHHHHHH
T ss_pred HHHHhhhcChhhhhccC------CCCc---eEEEe-cCCCEEEEEeeCCCcCcccccCCCCcCCccC-HHHHHHHHHHHH
Confidence 1111111111100000 0000 11111 1123455555432100 00 00000 123455543321
Q ss_pred hhccCCCceEEEEEcccCCCCCCc---cc-cc-----cccC-CcCCCEEEeCcccccccCCcc-cCCCCceEecCCCCcc
Q 004738 211 EECQVSDWFNILVLHQNRVKTNPK---NA-IN-----EHFL-PRFLDFVVWGHEHECLIDPQE-VPGMGFHLTQPGSSVA 279 (732)
Q Consensus 211 ~~~~~~~~fnILvlHqn~~~~~~~---~~-I~-----e~lL-p~~~DyVa~GH~H~~~i~Pq~-~~~~g~~I~yPGS~va 279 (732)
. .+..+...|+++|++....... .+ +. ..++ ...+|+|++||+|........ ..+.+..++.+||...
T Consensus 230 ~-~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~~~~~~~~~g~~~~~i~~gs~~~ 308 (443)
T 2xmo_A 230 L-AKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSV 308 (443)
T ss_dssp H-HHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTCCEEEECSSCSCEEEEEECTTSCEEEEEECCCTTS
T ss_pred H-HHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCCeEEEECCcccCchhhcccCCCCceEEEEcCcccc
Confidence 1 1123567899999987543210 01 10 1122 247999999999997653211 1233467788888532
Q ss_pred cccccCccCCCeEEEEEEeCCe--eEEEEEECC
Q 004738 280 TSLIEGESKPKHVLLLEIKENQ--YRPTKIPLT 310 (732)
Q Consensus 280 tS~~egE~~~Kgv~LLeI~~~~--~~ve~IpL~ 310 (732)
.+.+|.++++.++. ++++.+.+.
T Consensus 309 --------~p~~y~il~i~~~~~~~~~~~~~l~ 333 (443)
T 2xmo_A 309 --------FPHKYGNITYSAKNKNFTYQSQKLD 333 (443)
T ss_dssp --------TTCEEEEEEEETTTTEEEEEEEECC
T ss_pred --------CCCCeEEEEEeCCCceEEEEEEEEe
Confidence 36799999999876 566655554
No 15
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.58 E-value=6e-15 Score=144.57 Aligned_cols=52 Identities=23% Similarity=0.293 Sum_probs=42.2
Q ss_pred cCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEEC
Q 004738 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPL 309 (732)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~IpL 309 (732)
..+|++++||+|.+.+. .. .+..+++|||... .+|++|+++++.+++++++|
T Consensus 127 ~~~d~vi~GHtH~~~~~--~~--~~~~~iNpGS~~~----------~sy~il~~~~~~~~~~~~~l 178 (178)
T 2kkn_A 127 EKPQVILFGHTHEPEDT--VK--AGVRFLNPGSLAE----------GSYAVLELDGGEVRFELKTL 178 (178)
T ss_dssp SCCSEEECCSCSSCCEE--EE--TTEEEECCCCTTT----------TEEEEEEEETTEEEEEEEEC
T ss_pred cCCCEEEECccCCCCeE--Ee--CCEEEEECCCCCC----------CeEEEEEECCCEEEEEEEeC
Confidence 56899999999997653 22 2578999999743 68999999999999998875
No 16
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.57 E-value=3.6e-14 Score=145.80 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=62.6
Q ss_pred CCccEEEEEcCCCCCCCCCch-------hchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCC----hhHHHHHHHH
Q 004738 10 ANTVRILVATDCHLGYMEKDE-------IRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPS----RSTLVKAIEI 78 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~-------~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs----~~tl~~~~el 78 (732)
...|||+|+||+|++...... ....+.+..|+++++.+.+.++|+||++|||++...+. ...+..+++.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 357999999999999753211 12345677899999999889999999999999875311 2333334444
Q ss_pred HHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 79 LRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 79 Lr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
|.+ .++|||+|+||||..
T Consensus 83 l~~-----------------------------------~~~p~~~v~GNHD~~ 100 (322)
T 2nxf_A 83 LDA-----------------------------------CSVDVHHVWGNHEFY 100 (322)
T ss_dssp HHT-----------------------------------TCSEEEECCCHHHHH
T ss_pred HHh-----------------------------------cCCcEEEecCCCCcc
Confidence 332 368999999999984
No 17
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.56 E-value=1.2e-14 Score=143.69 Aligned_cols=163 Identities=18% Similarity=0.280 Sum_probs=102.7
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~ 90 (732)
++|||+++||+|.. +.+|+++++.+.+.++|+|+++||+++ | .+++.|++
T Consensus 24 g~m~i~~iSD~Hg~------------~~~l~~~l~~~~~~~~D~ii~~GDl~~---~------~~~~~l~~--------- 73 (190)
T 1s3l_A 24 GHMKIGIMSDTHDH------------LPNIRKAIEIFNDENVETVIHCGDFVS---L------FVIKEFEN--------- 73 (190)
T ss_dssp --CEEEEECCCTTC------------HHHHHHHHHHHHHSCCSEEEECSCCCS---T------HHHHHGGG---------
T ss_pred CCeEEEEEeeCCCC------------HHHHHHHHHHHhhcCCCEEEECCCCCC---H------HHHHHHHh---------
Confidence 35999999999931 457889999988899999999999986 2 23343322
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeEEEE
Q 004738 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI 170 (732)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i~Pv 170 (732)
.++||++|+||||..... .... |... +++.+
T Consensus 74 --------------------------l~~~~~~V~GNhD~~~~~----~~~~---------~~~~-----~~~~l----- 104 (190)
T 1s3l_A 74 --------------------------LNANIIATYGNNDGERCK----LKEW---------LKDI-----NEENI----- 104 (190)
T ss_dssp --------------------------CSSEEEEECCTTCCCHHH----HHHH---------HHHH-----CTTCE-----
T ss_pred --------------------------cCCCEEEEeCCCcchHHH----HHHH---------hccc-----Chhhh-----
Confidence 257999999999975310 0011 1110 00000
Q ss_pred EEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCc-CCCEE
Q 004738 171 LIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR-FLDFV 249 (732)
Q Consensus 171 ll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~-~~DyV 249 (732)
...+ ..+ ..+.++|+++|+.... +.+.+... .+||+
T Consensus 105 -----------~~~~-----------------~~~---------~~~~~~ill~Hg~~~~------l~~~~~~~~~~d~v 141 (190)
T 1s3l_A 105 -----------IDDF-----------------ISV---------EIDDLKFFITHGHHQS------VLEMAIKSGLYDVV 141 (190)
T ss_dssp -----------EESE-----------------EEE---------EETTEEEEEEESCCHH------HHHHHHHHSCCSEE
T ss_pred -----------cccc-----------------eEE---------eeCCcEEEEECCChHH------HHHHHHhcCCCCEE
Confidence 0000 000 0145799999986321 22223333 79999
Q ss_pred EeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEE
Q 004738 250 VWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRP 304 (732)
Q Consensus 250 a~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~v 304 (732)
++||+|..++. .. .+..+++|||... . . ..+.+|+|+++.++.+++
T Consensus 142 l~GHtH~~~~~--~~--~~~~~iNpGs~~~--r-~--~~~~~y~il~~~~~~v~~ 187 (190)
T 1s3l_A 142 IYGHTHERVFE--EV--DDVLVINPGECCG--Y-L--TGIPTIGILDTEKKEYRE 187 (190)
T ss_dssp EEECSSCCEEE--EE--TTEEEEECCCSSC--T-T--TSCCEEEEEETTTTEEEE
T ss_pred EECCCCCcceE--EE--CCEEEEECCcccc--c-C--CCCCEEEEEEcCCCcEEE
Confidence 99999998653 22 2468999999765 2 1 246899999998775443
No 18
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.52 E-value=1.9e-13 Score=140.21 Aligned_cols=254 Identities=14% Similarity=0.190 Sum_probs=129.2
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~ 89 (732)
.+.|||+|+||+|++....- .........+.+.+.+.+.+||+||++||++.........-....+.+..+
T Consensus 4 ~~~~~~~~isD~h~~~~~~~--~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~------- 74 (313)
T 1ute_A 4 TPILRFVAVGDWGGVPNAPF--HTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDV------- 74 (313)
T ss_dssp CCCEEEEEECSCCCCSSTTS--SCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTT-------
T ss_pred CCceEEEEEcccCCCCCccc--cCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHH-------
Confidence 46899999999999853210 001112233444455667899999999999765321110000122222211
Q ss_pred ceeeechhhhhcccccCccccCCCCCCC-CCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeEE
Q 004738 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNV-GLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVY 168 (732)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNyedpn~n~-~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i~ 168 (732)
+.. ... ++|+|+|+||||...... ..+......... .+.. .. .
T Consensus 75 ---------------~~~-------~~l~~~p~~~v~GNHD~~~~~~--~~~~~~~~~~~~-~~~~------~~-----y 118 (313)
T 1ute_A 75 ---------------FSD-------PSLRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRW-NFPS------PY-----Y 118 (313)
T ss_dssp ---------------SCS-------GGGTTCCEEECCCHHHHHSCHH--HHHHGGGTSTTE-ECCS------SS-----E
T ss_pred ---------------cCc-------hhhcCCCEEEECCCCccCCCcc--ccccccccCCCc-cCcc------cc-----e
Confidence 000 013 689999999999754211 111111100000 0110 00 0
Q ss_pred EEEEe--eCCeeEEEEecCCCc-----------------HHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCC
Q 004738 169 PILIR--KGSTAVALYGLGNIR-----------------DERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRV 229 (732)
Q Consensus 169 Pvll~--kG~t~vaLyGLg~ir-----------------derL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~ 229 (732)
...+. .+...+.+++|.... ...+. ...+.|+...... ....+.|+++|.+..
T Consensus 119 ~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~-----~~q~~wL~~~L~~---~~~~~~iv~~H~p~~ 190 (313)
T 1ute_A 119 RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALA-----RTQLAWIKKQLAA---AKEDYVLVAGHYPVW 190 (313)
T ss_dssp EEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHH-----HHHHHHHHHHHHH---CCCSEEEEECSSCSS
T ss_pred EEEEecCCCCceEEEEEEEChHHhCcCccccccccCCccccchH-----HHHHHHHHHHHHh---CCCCeEEEEECCCCc
Confidence 01111 111355666664211 01111 1345676544321 234689999999876
Q ss_pred CCCCc---ccccc---c-cCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccc---------------cccCc-
Q 004738 230 KTNPK---NAINE---H-FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATS---------------LIEGE- 286 (732)
Q Consensus 230 ~~~~~---~~I~e---~-lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS---------------~~egE- 286 (732)
..... ..+.. . +....+|+|++||+|..... . ...+..++.+||.-... |..++
T Consensus 191 ~~~~~~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~--~-~~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (313)
T 1ute_A 191 SIAEHGPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL--Q-DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAE 267 (313)
T ss_dssp CCSSSCCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE--E-CTTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCT
T ss_pred cCCCCCCcHHHHHHHHHHHHHcCCcEEEECChhhhhhc--c-CCCCceEEEECCCcCcCccccccccCCCcccceeccCc
Confidence 43221 11111 1 22346999999999975432 1 12245667777754321 10011
Q ss_pred cCCCeEEEEEEeCCeeEEEEEECCCCCcEEEEEE
Q 004738 287 SKPKHVLLLEIKENQYRPTKIPLTSVRPFEYTEI 320 (732)
Q Consensus 287 ~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI 320 (732)
....+|.+|+|.++.+.++++.+.. +++...+|
T Consensus 268 ~~~~gy~~l~v~~~~~~~~~~~~~g-~~~~~~~l 300 (313)
T 1ute_A 268 NSLGGFAYVEITPKEMSVTYIEASG-KSLFKTKL 300 (313)
T ss_dssp TSCCEEEEEEECSSCEEEEEEETTS-CEEEEEEE
T ss_pred CCCCceEEEEEEcCEEEEEEEcCCC-cEEEEEEe
Confidence 1237999999999899999999854 65553333
No 19
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=99.45 E-value=1.5e-12 Score=130.18 Aligned_cols=177 Identities=18% Similarity=0.264 Sum_probs=108.2
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCC--hh--HHHHHHHHHHHhccC
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPS--RS--TLVKAIEILRRHCLN 85 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs--~~--tl~~~~elLr~l~~g 85 (732)
..||||+++||+|++ +..|+++++.+.+.++|+|+++||+++..... .. ....++++|+++
T Consensus 23 ~~mmki~~iSD~H~~------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~--- 87 (208)
T 1su1_A 23 NAMMKLMFASDIHGS------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--- 87 (208)
T ss_dssp --CCEEEEECCCTTB------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT---
T ss_pred cccEEEEEEEcCCCC------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhc---
Confidence 446999999999975 35788999998888999999999999864311 00 123455666542
Q ss_pred CCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccce
Q 004738 86 DRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEI 165 (732)
Q Consensus 86 d~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i 165 (732)
++||++|+||||.... .++.. |...
T Consensus 88 --------------------------------~~~v~~V~GNHD~~~~-------~~~~~------~~~~---------- 112 (208)
T 1su1_A 88 --------------------------------AHKVIAVRGNCDSEVD-------QMLLH------FPIT---------- 112 (208)
T ss_dssp --------------------------------GGGEEECCCTTCCHHH-------HHHSS------SCCC----------
T ss_pred --------------------------------CCceEEEECCCchHHH-------Hhhhh------cccc----------
Confidence 3699999999996321 11110 1100
Q ss_pred eEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCcC
Q 004738 166 TVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRF 245 (732)
Q Consensus 166 ~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~ 245 (732)
+ . .. ++ .-+..+|+++|+..... ..++ . +. .
T Consensus 113 ---~------~--~~-----------------------~~---------~~~g~~i~l~Hg~~~~~---~~l~-~-~~-~ 143 (208)
T 1su1_A 113 ---A------P--WQ-----------------------QV---------LLEKQRLFLTHGHLFGP---ENLP-A-LN-Q 143 (208)
T ss_dssp ---C------S--EE-----------------------EE---------ECSSCEEEEECSSSSBT---TBCC-C-CC-T
T ss_pred ---C------c--eE-----------------------EE---------EECCcEEEEECCCCCCc---chhh-h-hc-C
Confidence 0 0 00 00 01346899999865321 1121 1 12 3
Q ss_pred CCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCeeEEEEEECCCCCcEEEE
Q 004738 246 LDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQYRPTKIPLTSVRPFEYT 318 (732)
Q Consensus 246 ~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~ 318 (732)
.|+|++||+|.+... .. .+..+++|||...-. ...+.+|++++. + .++.+.+.. .++...
T Consensus 144 ~d~vi~GHtH~~~~~--~~--~~~~~iNpGs~~~pr----~~~~~sy~il~~--~--~~~~~~~~~-~~~~~~ 203 (208)
T 1su1_A 144 NDVLVYGHTHLPVAE--QR--GEIFHFNPGSVSIPK----GGNPASYGMLDN--D--VLSVIALND-QSIIAQ 203 (208)
T ss_dssp TCEEECCSSCCCEEE--EE--TTEEEEECCCSSCCC----TTCCCEEEEEET--T--EEEEEETTT-CCEEEE
T ss_pred CCEEEECCcccCccE--Ee--CCEEEEECCCCcCCC----CCCCCEEEEEEC--C--eEEEEEeCC-CEEEEE
Confidence 499999999997653 22 246899999975321 123578999984 3 466667753 355433
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.41 E-value=2.3e-12 Score=133.92 Aligned_cols=208 Identities=17% Similarity=0.170 Sum_probs=113.4
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCC
Q 004738 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDR 87 (732)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~ 87 (732)
...+++||+++||+|.. +.+|+++++.+...++|.|+++|||++....+. .++++|+++
T Consensus 7 ~~~~~~~i~~iSDiHg~------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~~----~~~~~l~~~----- 65 (270)
T 3qfm_A 7 HHMDMTKIALLSDIHGN------------TTALEAVLADARQLGVDEYWLLGDILMPGTGRR----RILDLLDQL----- 65 (270)
T ss_dssp ----CEEEEEECCCTTC------------HHHHHHHHHHHHHTTCCEEEECSCCSSSSSCSH----HHHHHHHTS-----
T ss_pred ccccccEEEEEecCCCC------------HHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH----HHHHHHHcc-----
Confidence 45789999999999954 457899999999999999999999998753332 456666531
Q ss_pred CcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeE
Q 004738 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITV 167 (732)
Q Consensus 88 p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i 167 (732)
.|+++|.||||.... ..+... . .|.... ...
T Consensus 66 -------------------------------~~~~~v~GNhD~~~~-------~~~~~~--~-~~~~~~-------~~~- 96 (270)
T 3qfm_A 66 -------------------------------PITARVLGNWEDSLW-------HGVRKE--L-DSTRPS-------QRY- 96 (270)
T ss_dssp -------------------------------CEEEECCCHHHHHHH-------HHHTTC--S-CTTSHH-------HHH-
T ss_pred -------------------------------CCEEEEcCChHHHHH-------Hhhccc--c-CCCcHH-------HHH-
Confidence 279999999996421 111100 0 000000 000
Q ss_pred EEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcC--hhhhhhccCCCceEEEEEcccCCCCCCcccc--------
Q 004738 168 YPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMR--PEAQEECQVSDWFNILVLHQNRVKTNPKNAI-------- 237 (732)
Q Consensus 168 ~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~--P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I-------- 237 (732)
+. ...-|-......+ .+.|+. |.... -.-+.++|+++|+...... ..++
T Consensus 97 ----~~----~~~~~~~~~L~~~----------~~~~L~~LP~~~~--~~~~g~~i~lvHg~p~~~~-~~~~~~~~~~~~ 155 (270)
T 3qfm_A 97 ----LL----RQCQYVLEEISLE----------EIEVLHNQPLQIH--RQFGDLTVGISHHLPDKNW-GRELIHTGKQEE 155 (270)
T ss_dssp ----HH----HHHHHHHTTSCHH----------HHHHHHSCCSEEE--EEETTEEEEEESSBTTBSS-SSTTSTTCCHHH
T ss_pred ----HH----HHHHHHHHHcCHH----------HHHHHHhCCCceE--EEECCcEEEEEECCCCCCC-CceecCCCcHHH
Confidence 00 0000101111122 123332 11100 0124678999997532110 0111
Q ss_pred -ccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccC---ccCCCeEEEEEEeCCe-eEEEEEEC
Q 004738 238 -NEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEG---ESKPKHVLLLEIKENQ-YRPTKIPL 309 (732)
Q Consensus 238 -~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~eg---E~~~Kgv~LLeI~~~~-~~ve~IpL 309 (732)
.+.+....+|++++||+|.+... .. ..+..+++|||.-.-..... ......|+||++.+++ ++++++.+
T Consensus 156 l~~~~~~~~~d~~i~GHtH~~~~~--~~-~~~~~~iNpGSvg~pr~~~~~~~~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 156 FDRLVTHPPCDIAVYGHIHQQLLR--YG-TGGQLIVNPGSIGQPFFLDAQLRKDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp HHHTTTTTTCSEEECCSSCSEEEE--EC-TTSCEEEEECCSSSCCCSSTTGGGCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred HHHHhcccCCCEEEECCcCchHhe--ec-cCCEEEEECCCccCCCCCCccccCCCCCEEEEEEecCCCceEEEEEEe
Confidence 11122357999999999986542 21 23568999999744222100 0125789999999875 56666544
No 21
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.40 E-value=1e-12 Score=127.25 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=57.0
Q ss_pred eEEEEEcccCCCCC-CccccccccCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCC-CeEEEEE
Q 004738 219 FNILVLHQNRVKTN-PKNAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKP-KHVLLLE 296 (732)
Q Consensus 219 fnILvlHqn~~~~~-~~~~I~e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~-Kgv~LLe 296 (732)
.+|+++|+...... ....+.+.+....+|++++||+|..... .. .+..+++|||..... . ..+ .+|++++
T Consensus 78 ~~i~~~Hg~~~~~~~~~~~l~~~~~~~~~d~vi~GHtH~~~~~--~~--~~~~~inpGs~~~~~--~--~~~~~~y~il~ 149 (176)
T 3ck2_A 78 TKIIQTHGHLFDINFNFQKLDYWAQEEEAAICLYGHLHVPSAW--LE--GKILFLNPGSISQPR--G--TIRECLYARVE 149 (176)
T ss_dssp EEEEEECSGGGTTTTCSHHHHHHHHHTTCSEEECCSSCCEEEE--EE--TTEEEEEECCSSSCC--T--TCCSCCEEEEE
T ss_pred eEEEEECCCccCCCCCHHHHHHHHHhcCCCEEEECCcCCCCcE--EE--CCEEEEECCCCCcCC--C--CCCCCeEEEEE
Confidence 56777777543211 1111111122356999999999997652 22 246899999975322 1 233 7999999
Q ss_pred EeCCeeEEEEEECCCCCcEE
Q 004738 297 IKENQYRPTKIPLTSVRPFE 316 (732)
Q Consensus 297 I~~~~~~ve~IpL~tvRpf~ 316 (732)
++++.+.++.+++.. +++.
T Consensus 150 ~~~~~~~v~~~~~~~-~~~~ 168 (176)
T 3ck2_A 150 IDDSYFKVDFLTRDH-EVYP 168 (176)
T ss_dssp ECSSEEEEEEECTTS-CBCT
T ss_pred EcCCEEEEEEEEECC-EEcc
Confidence 998889999999863 4443
No 22
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.35 E-value=2.8e-12 Score=129.71 Aligned_cols=71 Identities=20% Similarity=0.204 Sum_probs=52.5
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHH---hc--CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCC
Q 004738 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAE---QK--EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLND 86 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~---e~--~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd 86 (732)
||||+++||+|.. +.+|+++++.+. .. ++|+||++|||++.. |... .+++.|+++.
T Consensus 1 mm~i~~isD~H~~------------~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g-~~~~---~~~~~l~~l~--- 61 (252)
T 1nnw_A 1 MVYVAVLANIAGN------------LPALTAALSRIEEMREEGYEIEKYYILGNIVGLF-PYPK---EVIEVIKDLT--- 61 (252)
T ss_dssp -CEEEEEECCTTC------------HHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSS-SCHH---HHHHHHHHHH---
T ss_pred CcEEEEEeecCCC------------HHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCC-CCHH---HHHHHHHhhH---
Confidence 6999999999964 346778888777 77 899999999999865 3222 3555665541
Q ss_pred CCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 87 RPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 87 ~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
...||++|+||||..
T Consensus 62 ------------------------------~~~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 62 ------------------------------KKENVKIIRGKYDQI 76 (252)
T ss_dssp ------------------------------HHSCEEEECCHHHHH
T ss_pred ------------------------------hhcCeeEEecchHHH
Confidence 125799999999964
No 23
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.29 E-value=2.6e-11 Score=128.40 Aligned_cols=202 Identities=14% Similarity=0.058 Sum_probs=110.3
Q ss_pred CCCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCC
Q 004738 8 DIANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDR 87 (732)
Q Consensus 8 ~~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~ 87 (732)
...+.|||+++||+|..... | .-.++|+||++|||++... ...+..++++|+++
T Consensus 55 ~~~~~mri~~iSD~H~~~~~------------l-------~i~~~D~vi~aGDl~~~g~--~~e~~~~~~~L~~l----- 108 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG------------I-------QMPYGDILLHTGDFTELGL--PSEVKKFNDWLGNL----- 108 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT------------C-------CCCSCSEEEECSCCSSSCC--HHHHHHHHHHHHTS-----
T ss_pred CCCCCeEEEEEeeCCCCcch------------h-------ccCCCCEEEECCcccCCCC--HHHHHHHHHHHHhC-----
Confidence 45677999999999998532 1 1147999999999999764 34556677777643
Q ss_pred CcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhh-----------------------
Q 004738 88 PVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS----------------------- 144 (732)
Q Consensus 88 p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~----------------------- 144 (732)
...|+|+|+||||...... .++.+.
T Consensus 109 -----------------------------~~~~v~~V~GNHD~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (296)
T 3rl5_A 109 -----------------------------PYEYKIVIAGNHELTFDKE---FMADLVKQDYYRFPSVSKLKPEDFDNVQS 156 (296)
T ss_dssp -----------------------------CCSEEEECCCTTCGGGCHH---HHHHHTTSCGGGSHHHHTCCHHHHTTTGG
T ss_pred -----------------------------CCCeEEEEcCCcccccchh---hhhhhhcccccccccccccccchhhhHhh
Confidence 1247999999999854211 111110
Q ss_pred -hCCceEEccceeecCCCccceeEEEEEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEE
Q 004738 145 -ACNLVNYFGKMVLGGSGVGEITVYPILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILV 223 (732)
Q Consensus 145 -~~glVn~FGk~~l~~~~~~~i~i~Pvll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILv 223 (732)
..|.+++-+ .-+.+ + .+.|||.++...-. ...|... ....+..... .......||+
T Consensus 157 l~~~~~~L~~--------------~~~~i--~--Gl~i~Gsp~tP~~~-~~~f~~~-~~~~~~~~~~---~ip~~~dILv 213 (296)
T 3rl5_A 157 LLTNSIYLQD--------------SEVTV--K--GFRIYGAPWTPWFN-GWGFNLP-RGQSLLDKWN---LIPEGTDILM 213 (296)
T ss_dssp GCTTSEECSS--------------EEEEE--T--TEEEEEECCBCC---CCTTBCC-TTHHHHHHHT---TSCTTCSEEE
T ss_pred hcCCeEEecC--------------CcEEE--C--CEEEEEecCCCCCC-CcCCCcc-hHHHHHHHHh---hCCCCCeEEE
Confidence 011111111 11222 1 37889987643211 1112110 0000000000 1235679999
Q ss_pred EcccCCCCCCc----------cccccccC-CcCCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeE
Q 004738 224 LHQNRVKTNPK----------NAINEHFL-PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHV 292 (732)
Q Consensus 224 lHqn~~~~~~~----------~~I~e~lL-p~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv 292 (732)
.|++..+.... ..+-+.++ ....+|+++||+|..... ... .+..+++|||.-. .. ..-...
T Consensus 214 TH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~-~~~--g~t~vvNpGs~~~-~~----~~~n~p 285 (296)
T 3rl5_A 214 THGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGT-MTD--GYTTYINASTCTV-SF----QPTNPP 285 (296)
T ss_dssp ESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEE-EEC--SSCEEEECBCSCT-TS----CCCSCC
T ss_pred ECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCce-EEE--CCEEEEECCcCCc-Cc----CCCCCC
Confidence 99987654211 01112232 456999999999997532 122 2468999999632 22 122334
Q ss_pred EEEEEe
Q 004738 293 LLLEIK 298 (732)
Q Consensus 293 ~LLeI~ 298 (732)
+++++.
T Consensus 286 ~v~dl~ 291 (296)
T 3rl5_A 286 IIFDLP 291 (296)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 666653
No 24
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.26 E-value=1e-11 Score=126.38 Aligned_cols=54 Identities=30% Similarity=0.388 Sum_probs=40.7
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHh
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l 82 (732)
++|||+++||+|.. +.+|+++++.+. ++|.|+++|||++... .. ..+++.|+.+
T Consensus 2 ~~mri~~isDiHg~------------~~~l~~~l~~~~--~~d~ii~~GDl~~~g~-~~---~~~~~~l~~~ 55 (246)
T 3rqz_A 2 NAMRILIISDVHAN------------LVALEAVLSDAG--RVDDIWSLGDIVGYGP-RP---RECVELVRVL 55 (246)
T ss_dssp CCCCEEEECCCTTC------------HHHHHHHHHHHC--SCSEEEECSCCSSSSS-CH---HHHHHHHHHH
T ss_pred CCcEEEEEeecCCC------------HHHHHHHHHhcc--CCCEEEECCCcCCCCC-CH---HHHHHHHHhc
Confidence 57999999999943 346778887765 9999999999998763 32 2456666653
No 25
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.22 E-value=1.3e-11 Score=121.09 Aligned_cols=81 Identities=15% Similarity=0.049 Sum_probs=54.7
Q ss_pred ccEEEEEcCCCCCCCCCchhch-hcHHHHHHHHHHHHHh--cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCC
Q 004738 12 TVRILVATDCHLGYMEKDEIRR-HDSFEAFEEICSIAEQ--KEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~-~Ds~~aFeeIl~~A~e--~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p 88 (732)
.|||+++||+|+|+......+. .+....++.+++.+.+ .++|+|+++|||++.. +... .++++|+++
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-~~~~---~~~~~l~~l------ 70 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-NDKN---EYLRIWKAL------ 70 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-CCTT---SHHHHHHHS------
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-hhHH---HHHHHHHHC------
Confidence 4899999999999753211111 1112245667777776 4899999999999875 3322 355666543
Q ss_pred cceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 89 ~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
..|+++|+||||..
T Consensus 71 -----------------------------~~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 71 -----------------------------PGRKILVMGNHDKD 84 (195)
T ss_dssp -----------------------------SSEEEEECCTTCCC
T ss_pred -----------------------------CCCEEEEeCCCCCc
Confidence 34899999999974
No 26
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.21 E-value=7.4e-11 Score=127.19 Aligned_cols=262 Identities=12% Similarity=0.087 Sum_probs=131.2
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcc
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQ 90 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~ 90 (732)
..+||++++|+|.|+.. .....+.+...+.+.++||||++||+|+....+... .+..+.+..
T Consensus 2 ~~l~f~~igD~g~g~~~--------q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d-~~~~~~f~~--------- 63 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKG--------QILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLND-PAWKNLYED--------- 63 (342)
T ss_dssp CCEEEEECCSCBSCCHH--------HHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTC-THHHHHTTT---------
T ss_pred ceEEEEEEecCCCCCch--------HHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCcc-HHHHHHHHH---------
Confidence 35899999999998532 233456777888899999999999999874322110 011112211
Q ss_pred eeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhh---hCCc----------eEEccceee
Q 004738 91 FQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILS---ACNL----------VNYFGKMVL 157 (732)
Q Consensus 91 ~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~---~~gl----------Vn~FGk~~l 157 (732)
+ |..++...++|+|+|+||||...... +.++.-. ..+- -....++.+
T Consensus 64 -----------------~-~~~~~~~~~~P~~~vlGNHD~~~~~~--aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~ 123 (342)
T 3tgh_A 64 -----------------V-YSEEKGDMYMPFFTVLGTRDWTGNYN--AQLLKGQGIYIEKNGETSIEKDADATNYPKWIM 123 (342)
T ss_dssp -----------------T-SCCGGGTTCSEEEECCCHHHHTSCHH--HHHHHHHC---------------CCCSSCEEEC
T ss_pred -----------------H-hhhhhhhhCCCEEEeCCCCccCCCch--HhhhhhhcccccccccccccccccccCCCCccC
Confidence 1 11111235899999999999864321 1111110 0000 000111111
Q ss_pred cCCCcc---ceeE--EEEEEeeC--CeeEEEEecCCCc-------HHHHHhhhcChhhHhhcChhhhhhccCCCceEEEE
Q 004738 158 GGSGVG---EITV--YPILIRKG--STAVALYGLGNIR-------DERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILV 223 (732)
Q Consensus 158 ~~~~~~---~i~i--~Pvll~kG--~t~vaLyGLg~ir-------derL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILv 223 (732)
++.-+. .+.+ .|.....| +..+.++.|.... ...-..... .++.||..... ...+.|++
T Consensus 124 P~~yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~--~Ql~WLe~~L~-----~~~~~IV~ 196 (342)
T 3tgh_A 124 PNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWN--DLKSQLSVAKK-----IADFIIVV 196 (342)
T ss_dssp SSSSEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHH--HHHHHHHHHHH-----HCSEEEEE
T ss_pred CcceEEEEEEeeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHH--HHHHHHHHhhc-----cCCcEEEE
Confidence 110000 0000 01111122 2346666664421 000011111 35677765442 24578999
Q ss_pred EcccCCCCCCc---cccccc----cCCcCCCEEEeCcccccccCCcccCCCCceEecCCCCcc-cc--cccC-----ccC
Q 004738 224 LHQNRVKTNPK---NAINEH----FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVA-TS--LIEG-----ESK 288 (732)
Q Consensus 224 lHqn~~~~~~~---~~I~e~----lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~va-tS--~~eg-----E~~ 288 (732)
.|.+....+.. ..+... +...++|+|++||.|..... ... +...+..|+.-. .. .... ...
T Consensus 197 ~HhP~~~~~~~~~~~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~--~~~--g~~~iv~Ga~g~~~~~~~~~~~~s~f~~~ 272 (342)
T 3tgh_A 197 GDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNMEVI--EDN--DMAHITCGSGSMSQGKSGMKNSKSLFFSS 272 (342)
T ss_dssp CSSCSSCSSTTCCCHHHHHHTHHHHHHTTCCEEEECSSSSEEEE--EET--TEEEEEECCSSCCCCCCSSCCTTEEEEEC
T ss_pred ECCCCCCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCcceeEE--eeC--CcEEEEeCccccccccCCCCCCcceeecC
Confidence 99987643321 111111 22357999999999987542 112 223333333211 10 0000 025
Q ss_pred CCeEEEEEEeCCeeEEEEEECCCCCcEEEEEEE
Q 004738 289 PKHVLLLEIKENQYRPTKIPLTSVRPFEYTEII 321 (732)
Q Consensus 289 ~Kgv~LLeI~~~~~~ve~IpL~tvRpf~~~eI~ 321 (732)
+.||.++++.++.+.++.+....-+.+...+|.
T Consensus 273 ~~Gf~~l~v~~~~l~~~~~~~~~G~vld~~~i~ 305 (342)
T 3tgh_A 273 DIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLN 305 (342)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTTEEEEEEEEE
T ss_pred CCcEEEEEEECCEEEEEEEECCCCcEEEEEEEE
Confidence 789999999999999999984444555444443
No 27
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=98.99 E-value=8.6e-09 Score=112.90 Aligned_cols=78 Identities=19% Similarity=-0.000 Sum_probs=51.2
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hhHHHHHHHHHHHhc
Q 004738 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLlaGDLFh~~kPs---~~tl~~~~elLr~l~ 83 (732)
....+||++++|+|.++. ...+ ++.+.+. ++|+||++||++...... ........+.|+.+
T Consensus 123 ~~~~~~f~~~gD~~~~~~---------~~~~----l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l- 188 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHD---------SNTT----LTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERS- 188 (426)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHHH----HHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCc---------hHHH----HHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHH-
Confidence 457899999999998731 1223 3333444 899999999999754321 12222233444432
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004738 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (732)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~ 132 (732)
...+|+|+++||||...
T Consensus 189 --------------------------------~~~~P~~~v~GNHD~~~ 205 (426)
T 1xzw_A 189 --------------------------------VAYQPWIWTAGNHEIDY 205 (426)
T ss_dssp --------------------------------HTTSCEECCCCGGGCCC
T ss_pred --------------------------------HhcCCEEEecccccccc
Confidence 24789999999999864
No 28
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=98.97 E-value=3.7e-09 Score=115.55 Aligned_cols=78 Identities=18% Similarity=0.040 Sum_probs=51.1
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCCC---hhHHHHHHHHHHHhc
Q 004738 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK--EVDFVLLGGDLFHENKPS---RSTLVKAIEILRRHC 83 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~--~VD~VLlaGDLFh~~kPs---~~tl~~~~elLr~l~ 83 (732)
....|||++++|+|+++. .+. +++.+.+. ++|+||++||++...... ........++|+.+
T Consensus 116 ~~~~~~f~~igD~~~~~~---------~~~----~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~- 181 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFD---------SNT----TLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS- 181 (424)
T ss_dssp TTCCEEEEEECSCTTBHH---------HHH----HHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeCCCCCC---------hHH----HHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH-
Confidence 457899999999999742 122 34444444 899999999999864321 11222233334332
Q ss_pred cCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004738 84 LNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (732)
Q Consensus 84 ~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~ 132 (732)
...+|+|++.||||...
T Consensus 182 --------------------------------~~~~P~~~v~GNHD~~~ 198 (424)
T 2qfp_A 182 --------------------------------VAYQPWIWTAGNHEIEF 198 (424)
T ss_dssp --------------------------------HTTSCEEECCCHHHHCC
T ss_pred --------------------------------HhcCCeEeecCCccccc
Confidence 23589999999999753
No 29
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.81 E-value=1.4e-08 Score=114.39 Aligned_cols=217 Identities=18% Similarity=0.192 Sum_probs=110.1
Q ss_pred CccEEEEEcCCCCCCCCCch------hchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChhHH---HHHHHHHH
Q 004738 11 NTVRILVATDCHLGYMEKDE------IRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTL---VKAIEILR 80 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~------~R~~Ds~~aFeeIl~~A~e~~VD~VLl-aGDLFh~~kPs~~tl---~~~~elLr 80 (732)
..++|||++|+|-.....+. ....-.+..+..+++.++++.++.|++ +||+|+.. ....+ ...+++|.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~--~~~~~~~g~~~~~~ln 82 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP--YISSLTKGKAIIDIMN 82 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS--HHHHTTTTHHHHHHHT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc--hhhhhcCChHHHHHHH
Confidence 46999999999944332211 011113667888888899999999888 99999853 11111 11222221
Q ss_pred HhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceee-cC
Q 004738 81 RHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVL-GG 159 (732)
Q Consensus 81 ~l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l-~~ 159 (732)
..+.. +++.||||.-.|...+ .+.+...++- +++.... ..
T Consensus 83 -----------------------------------~lg~D-~~tlGNHEfd~G~~~l--~~~l~~~~~p-~l~aNv~~~~ 123 (509)
T 3ive_A 83 -----------------------------------TMPFD-AVTIGNHEFDHGWDNT--LLQLSQAKFP-IVQGNIFYQN 123 (509)
T ss_dssp -----------------------------------TSCCS-EECCCGGGGTTCHHHH--HHHHTTCSSC-BCCCSEEETT
T ss_pred -----------------------------------hcCCc-EEeecccccccCHHHH--HHHHhhCCCC-EEEEEEEECC
Confidence 12333 4567999976553322 2334443321 1111000 00
Q ss_pred CCccceeEEE-EEEeeCCeeEEEEecCCCc-------HHHHH-hhhcCh-hhHhhcChhhhhhccCCCceEEEEEcccCC
Q 004738 160 SGVGEITVYP-ILIRKGSTAVALYGLGNIR-------DERLN-RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRV 229 (732)
Q Consensus 160 ~~~~~i~i~P-vll~kG~t~vaLyGLg~ir-------derL~-~~f~~~-~~v~~l~P~~~~~~~~~~~fnILvlHqn~~ 229 (732)
.+ ..+-..| +++..++.+|+|.|+-... ..... -.|.++ ..++...++. .....+-|++.|....
T Consensus 124 ~~-~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~L----k~~~D~iIvl~H~G~~ 198 (509)
T 3ive_A 124 SS-KSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDEL----KGKVDLTVALIHEGVP 198 (509)
T ss_dssp SC-CBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGCTTEEECCHHHHHHHHHHHH----TTTCSEEEEEEECSSC
T ss_pred CC-CccCcCCeEEEEECCEEEEEEecccCcccccccccccCCCCEEcCHHHHHHHHHHHH----HhcCCEEEEEeccCcC
Confidence 00 0000123 3456788999999983210 00000 011111 0011111111 1124688999999754
Q ss_pred CCCCcc---c----cc-----cccCCcCCCEEEeCcccccccCCcccCCCCceEecCCC
Q 004738 230 KTNPKN---A----IN-----EHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (732)
Q Consensus 230 ~~~~~~---~----I~-----e~lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS 276 (732)
...... . .. ...+ .++|+|+.||.|.....|..+. +..|+|||+
T Consensus 199 ~~~~~~~~~~~~~~~~~d~~la~~~-~giDlIlgGHtH~~~~~~~~~~--~~~ivqag~ 254 (509)
T 3ive_A 199 ARQSSMGGTDVRRALDKDIQTASQV-KGLDILITGHAHVGTPEPIKVG--NTLILSTDS 254 (509)
T ss_dssp CCCCCC---CCCCCCHHHHHHHHHC-SSCCEEEEESSCCCCSSCEEET--TEEEECCCS
T ss_pred CccccccccccccccchHHHHHhcC-CCCcEEEeCCcCccCCCCeeeC--CEEEEecCh
Confidence 321100 0 00 0122 3599999999998765555443 467888876
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.80 E-value=3.3e-08 Score=111.27 Aligned_cols=204 Identities=16% Similarity=0.189 Sum_probs=98.1
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh----cCC-CEEEEcCCCCCCCCCChhH---HHHHHHHHHH
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ----KEV-DFVLLGGDLFHENKPSRST---LVKAIEILRR 81 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e----~~V-D~VLlaGDLFh~~kPs~~t---l~~~~elLr~ 81 (732)
...|+|||++|+|..+..... ..-.+..+..+++.+++ .++ ++||.+||+|+.. | ... ....+++|..
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~--~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~-~-~~~~~~~~~~~~~ln~ 81 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEY--GEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGV-P-ESDLQDAEPDFRGMNL 81 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTT--SCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSC-H-HHHTTTTHHHHHHHHH
T ss_pred ceEEEEEEecccccCccCCCC--CCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCc-c-hhhhcCCcHHHHHHhc
Confidence 456999999999987543211 11123344455554443 356 7999999999743 2 111 1133444443
Q ss_pred hccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCC
Q 004738 82 HCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSG 161 (732)
Q Consensus 82 l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~ 161 (732)
+ + +.+++.||||...+...+ ...+...++ .+++...... .
T Consensus 82 l-----------------------------------g-~d~~~~GNHEfd~g~~~l--~~~~~~~~~-~~l~aNv~~~-~ 121 (516)
T 1hp1_A 82 V-----------------------------------G-YDAMAIGNHEFDNPLTVL--RQQEKWAKF-PLLSANIYQK-S 121 (516)
T ss_dssp H-----------------------------------T-CCEEECCGGGGSSCHHHH--HHHHHHCSS-CEECSSEEET-T
T ss_pred c-----------------------------------C-CCEEeeccccccCCHHHH--HHHHhhCCC-CEEEeEEEEC-C
Confidence 2 3 236789999986653221 133444332 1111100000 0
Q ss_pred ccceeEEE-EEEeeCCeeEEEEecCCCcHHHHH-------hhhcCh-hhHhhcChhhhhhccCCCceEEEEEcccCCCCC
Q 004738 162 VGEITVYP-ILIRKGSTAVALYGLGNIRDERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTN 232 (732)
Q Consensus 162 ~~~i~i~P-vll~kG~t~vaLyGLg~irderL~-------~~f~~~-~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~ 232 (732)
.+.-.+.| .++..++.+|+|.|+....-..+. -.|.++ ..++...++... .....+.|++.|.......
T Consensus 122 ~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~v~~l~~--~~~~d~iI~l~H~g~~~~~ 199 (516)
T 1hp1_A 122 TGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQ--TEKPDIIIAATHMGHYDNG 199 (516)
T ss_dssp TTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEECCHHHHHHHHHHHHHH--HTCCSEEEEEEESCCCGGG
T ss_pred CCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEEeCHHHHHHHHHHHHHh--cCCCCEEEEEecCCccCCC
Confidence 00001223 345678899999998432100000 001110 001111111110 0135689999998763211
Q ss_pred --Ccc-----ccccccCCcCCCEEEeCccccccc
Q 004738 233 --PKN-----AINEHFLPRFLDFVVWGHEHECLI 259 (732)
Q Consensus 233 --~~~-----~I~e~lLp~~~DyVa~GH~H~~~i 259 (732)
+.+ .+...+-...+|+|+.||.|..+.
T Consensus 200 ~~~~~~~~~~~la~~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 200 EHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp CCTTSCCCHHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred cccccCchHHHHHHhCCCCceeEEECCCCCcccc
Confidence 000 111122223599999999998653
No 31
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.78 E-value=2.1e-08 Score=114.61 Aligned_cols=186 Identities=17% Similarity=0.210 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHhc--C--CC-EEEEcCCCCCCCCCChhHH---HHHHHHHHHhccCCCCcceeeechhhhhcccccCccc
Q 004738 38 EAFEEICSIAEQK--E--VD-FVLLGGDLFHENKPSRSTL---VKAIEILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVN 109 (732)
Q Consensus 38 ~aFeeIl~~A~e~--~--VD-~VLlaGDLFh~~kPs~~tl---~~~~elLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lN 109 (732)
..+..+++.++++ + +| +||.+||+|+... ...+ ..++++|+.+
T Consensus 105 arla~~v~~~r~~~~~~gpd~Lll~~GD~~~gs~--~~~~~~g~~~~~~ln~l--------------------------- 155 (562)
T 2wdc_A 105 GALTALIRDQKARVEAEGGKALVLDGGDTWTNSG--LSLLTRGEAVVRWQNLV--------------------------- 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECSCCSSSSH--HHHHHTTHHHHHHHHHH---------------------------
T ss_pred HHHHHHHHHHHhhhhcCCCCEEEEeCCCCCCcch--hhhhhCCHHHHHHHHhh---------------------------
Confidence 3455677777665 4 89 8999999998542 1111 2344555442
Q ss_pred cCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeEEEE-EEeeCCeeEEEEecCCCc
Q 004738 110 YEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYPI-LIRKGSTAVALYGLGNIR 188 (732)
Q Consensus 110 yedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i~Pv-ll~kG~t~vaLyGLg~ir 188 (732)
+.+++ + ||||...+...+ ...+...+. .+++..... ...+.-.+.|. ++..++.+|+|.|+-...
T Consensus 156 --------g~d~~-~-GNHEfd~G~~~l--~~~l~~~~~-p~L~aNv~~-~~~~~~~~~py~i~e~~G~kIgiiG~~~~~ 221 (562)
T 2wdc_A 156 --------GVDHM-V-SHWEWTLGRERV--EELLGLFRG-EFLSYNIVD-DLFGDPLFPAYRIHRVGPYALAVVGASYPY 221 (562)
T ss_dssp --------TCCEE-C-CSGGGGGCHHHH--HHHHHHCCS-EECCSSCEE-TTTCCBSSCSEEEEEETTEEEEEEEECCTT
T ss_pred --------CCcEE-e-cchhcccCHHHH--HHHHHhCCC-CEEEEEEEe-cCCCCcccCCeEEEEECCeEEEEEeeccCc
Confidence 45665 6 999975543222 234444442 222210000 00011112343 456778999999985432
Q ss_pred HHHHH-------hhhcCh-hhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCcCCCEEEeCcccccccC
Q 004738 189 DERLN-------RMFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDFVVWGHEHECLID 260 (732)
Q Consensus 189 derL~-------~~f~~~-~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~~DyVa~GH~H~~~i~ 260 (732)
-.... -.|... ..++...+.... ....+.|++.|..... ...+... + .++|+|+.||.|.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~---d~~la~~-~-~giDlIlgGHtH~~~~~ 293 (562)
T 2wdc_A 222 VKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQL---DAALAER-I-RGIDLILSGHTHDLTPR 293 (562)
T ss_dssp HHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHH---HHHHHTT-S-SSCCEEEECSSCCCCSS
T ss_pred ccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcc---hHHHHhc-C-CCCcEEEeCCCCCCCcc
Confidence 11100 001110 011111111110 1346889999986321 0011111 2 46999999999998765
Q ss_pred CcccCCCCceEecCCC
Q 004738 261 PQEVPGMGFHLTQPGS 276 (732)
Q Consensus 261 Pq~~~~~g~~I~yPGS 276 (732)
|..+ + +..|+++|+
T Consensus 294 ~~~~-~-~t~vvqag~ 307 (562)
T 2wdc_A 294 PWRV-G-KTWIVAGSA 307 (562)
T ss_dssp CEEE-T-TEEEEECCS
T ss_pred CEEE-C-CEEEEecCc
Confidence 5443 2 467888887
No 32
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.76 E-value=2.7e-08 Score=113.20 Aligned_cols=201 Identities=16% Similarity=0.150 Sum_probs=103.2
Q ss_pred CCCccEEEEEcCCCCCCCCCch-hch----hcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCChhHH---HHHHHHH
Q 004738 9 IANTVRILVATDCHLGYMEKDE-IRR----HDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSRSTL---VKAIEIL 79 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~-~R~----~Ds~~aFeeIl~~A~e~~VD-~VLlaGDLFh~~kPs~~tl---~~~~elL 79 (732)
....++|||++|+|........ .+. .-.+..+..+++.++++.+| +||.+||+|+... ...+ ...+++|
T Consensus 26 ~~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~--~~~~~~~~~~~~~l 103 (552)
T 2z1a_A 26 GGFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTL--YFNQYRGLADRYFM 103 (552)
T ss_dssp --CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSH--HHHHHTTHHHHHHH
T ss_pred CCeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcH--HHHHhCCcHHHHHH
Confidence 4567999999999965432200 000 11356778888888888898 8899999998642 1111 1233333
Q ss_pred HHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecC
Q 004738 80 RRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGG 159 (732)
Q Consensus 80 r~l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~ 159 (732)
.. .+. .+++.||||...+...+ ...+...+. .+++......
T Consensus 104 n~-----------------------------------lg~-d~~~lGNHEfd~g~~~l--~~~l~~~~~-~~L~aNv~~~ 144 (552)
T 2z1a_A 104 HR-----------------------------------LRY-RAMALGNHEFDLGPGPL--ADFLKGARF-KVVSANVDAS 144 (552)
T ss_dssp HH-----------------------------------TTC-CEEECCGGGGTTCHHHH--HHHHTTCCS-EEECTTEECT
T ss_pred Hh-----------------------------------cCC-CccccccccccCCHHHH--HHHHhhCCC-CEEEEEEecC
Confidence 32 122 36788999986653222 234544443 2222110000
Q ss_pred CCccce--eEEE-EEEeeCCeeEEEEecCCCcHHHHHh-----hhcCh-hhHhhcChhhhhhccCCCceEEEEEcccCCC
Q 004738 160 SGVGEI--TVYP-ILIRKGSTAVALYGLGNIRDERLNR-----MFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQNRVK 230 (732)
Q Consensus 160 ~~~~~i--~i~P-vll~kG~t~vaLyGLg~irderL~~-----~f~~~-~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~ 230 (732)
+...+ .+.| +++..++.+|+|.|+-...-..+.. .|.++ ..++...+.... ....+.|++.|.....
T Consensus 145 -~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~ 220 (552)
T 2z1a_A 145 -REPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE 220 (552)
T ss_dssp -TCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH
T ss_pred -CCcccccccCCeEEEEECCEEEEEEEecccchhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcch
Confidence 00000 1234 2456678899999985432111100 01110 001111111110 1356889999986321
Q ss_pred CCCccccccccCCcCCCEEEeCccccccc
Q 004738 231 TNPKNAINEHFLPRFLDFVVWGHEHECLI 259 (732)
Q Consensus 231 ~~~~~~I~e~lLp~~~DyVa~GH~H~~~i 259 (732)
...+... + .++|+|+.||.|..+.
T Consensus 221 ---d~~la~~-~-~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 221 ---DLKLARR-L-VGVQVIVGGHSHTLLG 244 (552)
T ss_dssp ---HHHHHTT-C-SSCCEEEECSSCCCBS
T ss_pred ---HHHHHHh-C-CCccEEEeCCcCcccc
Confidence 0001111 2 4699999999999764
No 33
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.61 E-value=2.3e-07 Score=104.90 Aligned_cols=218 Identities=19% Similarity=0.277 Sum_probs=110.1
Q ss_pred CCCccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCCCCChhHH-------HHHH
Q 004738 9 IANTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHENKPSRSTL-------VKAI 76 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLlaGDLFh~~kPs~~tl-------~~~~ 76 (732)
....++|||++|+|-.+...+.. ...-.+..+..+++.++++.++ ++|.+||+|+.. |-...+ ...+
T Consensus 16 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs-~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 16 QGSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGS-PFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp --CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSS-HHHHHHHHTTCSSHHHH
T ss_pred CCCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCc-HHHHHHhhcccCcchHH
Confidence 34679999999999654332210 1112356778888888888887 667799999854 211111 2344
Q ss_pred HHHHHhccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEcccee
Q 004738 77 EILRRHCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMV 156 (732)
Q Consensus 77 elLr~l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~ 156 (732)
++|.. .+.. +++.||||.-.+...+ .+.+...++- +++...
T Consensus 95 ~~ln~-----------------------------------lg~D-~~t~GNHefd~G~~~l--~~~~~~~~~p-~l~aNv 135 (527)
T 3qfk_A 95 DFYNR-----------------------------------MAFD-FGTLGNHEFNYGLPYL--KDTLRRLNYP-VLCANI 135 (527)
T ss_dssp HHHHH-----------------------------------TCCC-EECCCGGGGTTCHHHH--HHHHHHCSSC-BCCSSE
T ss_pred HHHHh-----------------------------------cCCc-EEeccccccccCHHHH--HHHHHhCCCC-EEEeEe
Confidence 44443 2444 4568999976554322 2334433321 111100
Q ss_pred ecCCCccceeEEE-EEEeeCCeeEEEEecCCCc------HHHHHh-hhcCh-hhHhhcChhhhhhccCCCceEEEEEccc
Q 004738 157 LGGSGVGEITVYP-ILIRKGSTAVALYGLGNIR------DERLNR-MFQTP-HAVQWMRPEAQEECQVSDWFNILVLHQN 227 (732)
Q Consensus 157 l~~~~~~~i~i~P-vll~kG~t~vaLyGLg~ir------derL~~-~f~~~-~~v~~l~P~~~~~~~~~~~fnILvlHqn 227 (732)
... + ..+-..| +++..++.+|+|.|+-... ...... .|.++ ..++...++..+ ...+-|++.|..
T Consensus 136 ~~~-g-~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~~----~~D~iIvl~H~G 209 (527)
T 3qfk_A 136 YEN-D-STLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKR----HADIIVVCYHGG 209 (527)
T ss_dssp EET-T-EESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECCHHHHHHHHHHHHHH----HCSEEEEEEECC
T ss_pred eeC-C-CCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcCHHHHHHHHHHHHHh----CCCEEEEEeCcC
Confidence 000 0 0000123 3456788999999984321 110000 11111 001111111111 245889999986
Q ss_pred CCCCC----Cccccc-c----ccC---CcCCCEEEeCcccccccCCcccCCCCceEecCCC
Q 004738 228 RVKTN----PKNAIN-E----HFL---PRFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGS 276 (732)
Q Consensus 228 ~~~~~----~~~~I~-e----~lL---p~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS 276 (732)
..... +...+. + .+. ..++|+|+.||.|..+. ..+. +..|++||+
T Consensus 210 ~~~d~~~~~~~~~~~~e~~~~~la~~~~~giDlIlgGHtH~~~~--~~v~--~~~ivqag~ 266 (527)
T 3qfk_A 210 FEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIA--ERFK--QTAVIQPGT 266 (527)
T ss_dssp CSBCTTTCCBSSCCSSSCCHHHHHHHHGGGCSEEECCSSCCEEE--EEET--TEEEEEECS
T ss_pred cccccccCccccccccchHHHHHHHhcCCCCcEEEECCCCcccc--eEEC--CEEEeccCh
Confidence 54211 000000 0 122 25799999999999763 3332 467888887
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.56 E-value=1.4e-07 Score=107.20 Aligned_cols=57 Identities=16% Similarity=0.115 Sum_probs=39.8
Q ss_pred CCCccEEEEEcCCCCCCCCCchhc--------hhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCC
Q 004738 9 IANTVRILVATDCHLGYMEKDEIR--------RHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHEN 65 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R--------~~Ds~~aFeeIl~~A~e~~V-D~VLlaGDLFh~~ 65 (732)
..-.++|||++|+|..+...+... ..-.+..+..+++.++++.+ ++||.+||+|+..
T Consensus 22 ~~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~ 87 (546)
T 4h2g_A 22 DPWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT 87 (546)
T ss_dssp -CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS
T ss_pred CceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCc
Confidence 445799999999996554332110 11135677888888888777 5999999999865
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.47 E-value=2.3e-07 Score=106.25 Aligned_cols=57 Identities=21% Similarity=0.215 Sum_probs=39.3
Q ss_pred CCCccEEEEEcCCCCCCCCCch---hc------hhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004738 9 IANTVRILVATDCHLGYMEKDE---IR------RHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~---~R------~~Ds~~aFeeIl~~A~e~~VD-~VLlaGDLFh~~ 65 (732)
..-.++|||++|+|-.+...+. .. ..-.+..+..+++.++++.++ ++|.+||+|+..
T Consensus 9 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs 75 (579)
T 3ztv_A 9 KAVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGT 75 (579)
T ss_dssp CCEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSS
T ss_pred CceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCc
Confidence 3456999999999954433210 00 001266778888888888887 889999999864
No 36
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=98.43 E-value=3.3e-06 Score=90.86 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=37.8
Q ss_pred CccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCC
Q 004738 11 NTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHE 64 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLlaGDLFh~ 64 (732)
-.++|||++|+|-.+...+.. ...-.+..+..+++.++++.++ ++|.+||+|+.
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qG 65 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQG 65 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSS
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCC
Confidence 469999999999765443211 0112356677788888888877 66889999974
No 37
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.40 E-value=1.9e-06 Score=92.65 Aligned_cols=57 Identities=19% Similarity=0.265 Sum_probs=38.0
Q ss_pred CCCccEEEEEcCCCCCCCCCchh----chhcHHHHHHHHHHHHHhcCCC-EEEEcCCCCCCC
Q 004738 9 IANTVRILVATDCHLGYMEKDEI----RRHDSFEAFEEICSIAEQKEVD-FVLLGGDLFHEN 65 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~----R~~Ds~~aFeeIl~~A~e~~VD-~VLlaGDLFh~~ 65 (732)
..-.++|||++|+|-.+...+.. ...-.+..+..+++.++++.++ ++|.+||+|...
T Consensus 8 ~~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~~~llld~GD~~qGs 69 (341)
T 3gve_A 8 PQVHLSILATTDIHANMMDYDYYSDKETADFGLARTAQLIQKHREQNPNTLLVDNGDLIQGN 69 (341)
T ss_dssp CEEEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred CceEEEEEEEeccCCCccCccccCCCccccCCHHHHHHHHHHHHhcCCCEEEEecCccCCCc
Confidence 34569999999999665443211 0111356677778888887777 456799999754
No 38
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.96 E-value=2.2e-06 Score=85.50 Aligned_cols=46 Identities=17% Similarity=0.162 Sum_probs=36.7
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCC
Q 004738 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENK 66 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLlaGDLFh~~k 66 (732)
...+|||+++||+|-. +.+|+++++.+... ++|.|+++||+++...
T Consensus 9 ~~~~~~i~visDiHg~------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~ 55 (221)
T 1g5b_A 9 GSKYRNIWVVGDLHGC------------YTNLMNKLDTIGFDNKKDLLISVGDLVDRGA 55 (221)
T ss_dssp GGGCSCEEEECCCTTC------------HHHHHHHHHHHTCCTTTCEEEECSCCSSSSS
T ss_pred CCCCceEEEEEcCCCC------------HHHHHHHHHHccCCCCCCEEEEeCCccCCCC
Confidence 3457999999999932 45688888877653 7999999999999763
No 39
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.88 E-value=1.3e-05 Score=91.50 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=35.2
Q ss_pred cCCCCccEEEEEcCCCCCCCCCch---hch-hcHHHHHHHHHHH-HHhcCCCE-EEEcCCCCCC
Q 004738 7 EDIANTVRILVATDCHLGYMEKDE---IRR-HDSFEAFEEICSI-AEQKEVDF-VLLGGDLFHE 64 (732)
Q Consensus 7 ~~~~~~mRILh~SD~HLG~~e~d~---~R~-~Ds~~aFeeIl~~-A~e~~VD~-VLlaGDLFh~ 64 (732)
......++|||++|+|-....... ... .-.+..|-..++. +.++++|. +|.+||+|+.
T Consensus 10 ~~~~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~G 73 (557)
T 3c9f_A 10 NLTWNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDG 73 (557)
T ss_dssp CCCCCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSS
T ss_pred CCCceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCC
Confidence 345668999999999986543210 000 0113444444443 23577884 7999999975
No 40
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.85 E-value=0.00011 Score=77.36 Aligned_cols=191 Identities=14% Similarity=0.142 Sum_probs=100.1
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~ 89 (732)
..||||+++|+| |+. -...+...+...+++ ++|++++.||-+-...+-.. ...+.|..
T Consensus 3 ~~m~ilf~GDv~-G~~---------G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~~~---~~~~~ln~-------- 61 (281)
T 1t71_A 3 NSIKFIFLGDVY-GKA---------GRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGLSL---KHYEFLKE-------- 61 (281)
T ss_dssp CCCEEEEECEEB-HHH---------HHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSCCH---HHHHHHHH--------
T ss_pred ceEEEEEECCcC-ChH---------HHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCcCH---HHHHHHHh--------
Confidence 469999999999 542 233455566666554 78999998887755544322 34444443
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCce---EEccceeecCCCcccee
Q 004738 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLV---NYFGKMVLGGSGVGEIT 166 (732)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glV---n~FGk~~l~~~~~~~i~ 166 (732)
.++-++.+ |||+.-.+.+ .++.|.....+ || .. ..... . .
T Consensus 62 ---------------------------~G~Da~Tl-GNHefD~g~~---~~~~l~~~~~v~~aN~-p~---~~~~~-~-~ 104 (281)
T 1t71_A 62 ---------------------------AGVNYITM-GNHTWFQKLD---LAVVINKKDLVRPLNL-DT---SFAFH-N-L 104 (281)
T ss_dssp ---------------------------HTCCEEEC-CTTTTCCGGG---HHHHTTCTTEECBSCB-CT---TSTTT-T-S
T ss_pred ---------------------------cCCCEEEE-ccCcccCCcc---HHHHhhhcCEEeeccC-Cc---ccccc-c-C
Confidence 25556555 9999877622 12233221111 11 00 00000 0 0
Q ss_pred EEE-EEEeeCCeeEEEEecC----CCcHHHHHhhhcChh-hHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccc
Q 004738 167 VYP-ILIRKGSTAVALYGLG----NIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEH 240 (732)
Q Consensus 167 i~P-vll~kG~t~vaLyGLg----~irderL~~~f~~~~-~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~ 240 (732)
..| .++..++.+|+|.|+- ++. -.|.++. .++.+.+. ..-.+-|++.|.... .....-..
T Consensus 105 g~g~~I~e~~G~kIgVIgl~g~~~f~~-----~~~~~pf~~a~~~v~~------~~~diIIv~~H~g~t---~Ek~~la~ 170 (281)
T 1t71_A 105 GQGSLVFEFNKAKIRITNLLGTSVPLP-----FKTTNPFKVLKELILK------RDCDLHIVDFHAETT---SEKNAFCM 170 (281)
T ss_dssp SBSEEEEECSSCEEEEEEEECTTSCCS-----SCBCCHHHHHHHHHTT------CCCSEEEEEEECSCH---HHHHHHHH
T ss_pred CCCeEEEEECCEEEEEEEeeccccccC-----ccccCHHHHHHHHHhh------cCCCEEEEEeCCCch---HHHHHHHH
Confidence 012 3456778899998862 221 0111110 11111011 124588999996421 11001112
Q ss_pred cCCcCCCEEEeCcccccccCCcccCCCCceEec
Q 004738 241 FLPRFLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (732)
Q Consensus 241 lLp~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~y 273 (732)
.++..+|+|+-||.|.....|+.+++...++..
T Consensus 171 ~~dg~VD~VvGgHTHv~t~d~~il~~gt~~i~d 203 (281)
T 1t71_A 171 AFDGYVTTIFGTHTHVPSADLRITPKGSAYITD 203 (281)
T ss_dssp HHTTTSSEEEEESSSSCCTTCEECTTSCEEESC
T ss_pred hCCCCeEEEEeCCCCcCCCceEEecCCcEEEec
Confidence 356679999999999988776665443333443
No 41
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.85 E-value=9.5e-06 Score=83.77 Aligned_cols=43 Identities=26% Similarity=0.399 Sum_probs=35.0
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCC
Q 004738 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENK 66 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLlaGDLFh~~k 66 (732)
.+||+++||+| |. +..|+++++.+....+ |.||++||+++...
T Consensus 18 ~~~i~visDiH-g~-----------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~ 61 (262)
T 2qjc_A 18 TGRVIIVGDIH-GC-----------RAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP 61 (262)
T ss_dssp CSCEEEECCCT-TC-----------HHHHHHHHHHHTCCTTTSEEEECSCCSSSSS
T ss_pred CCeEEEEeCCC-CC-----------HHHHHHHHHHHhccCCCCEEEEecCCCCCCC
Confidence 35999999999 42 3578889888877665 99999999999763
No 42
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.72 E-value=1.6e-05 Score=83.16 Aligned_cols=53 Identities=17% Similarity=0.227 Sum_probs=39.1
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHH
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ-KEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e-~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~ 81 (732)
|||++++|+|-. +..|.++++.+.. .++|.|+++||++|....+. .++++|..
T Consensus 1 M~i~vigDiHG~------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~----~~l~~l~~ 54 (280)
T 2dfj_A 1 MATYLIGDVHGC------------YDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL----DVLRYVKS 54 (280)
T ss_dssp -CEEEECCCCSC------------HHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH----HHHHHHHH
T ss_pred CeEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH----HHHHHHHh
Confidence 789999999954 3467888877765 57899999999999764443 35566654
No 43
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.64 E-value=0.00018 Score=81.23 Aligned_cols=54 Identities=19% Similarity=0.227 Sum_probs=35.5
Q ss_pred ccEEEEEcCCCCCCCCCch--------hchhcHHHHHHHHHHHHHhcCCCE-EEEcCCCCCCC
Q 004738 12 TVRILVATDCHLGYMEKDE--------IRRHDSFEAFEEICSIAEQKEVDF-VLLGGDLFHEN 65 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~--------~R~~Ds~~aFeeIl~~A~e~~VD~-VLlaGDLFh~~ 65 (732)
.++|||++|+|--....+. ....-.+..+-.+++.+++++++. +|.+||+|..+
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs 65 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGT 65 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSS
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccch
Confidence 3799999999954432211 001113566777778888888875 55699999864
No 44
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.51 E-value=0.00062 Score=70.63 Aligned_cols=185 Identities=15% Similarity=0.111 Sum_probs=97.6
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~e 92 (732)
||||++.|+= |.. -+.++...+...+++. |++|+.|+-+-...+-.. ...+.|..
T Consensus 1 m~ilf~GDv~-g~~---------G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~----------- 55 (255)
T 1t70_A 1 MRVLFIGDVF-GQP---------GRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALE----------- 55 (255)
T ss_dssp CEEEEECCBB-HHH---------HHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHH-----------
T ss_pred CEEEEEeccC-ChH---------HHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHh-----------
Confidence 8999999985 422 1346677888887777 998876664433333222 23344433
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCC--c---eEEc-cceeecCCCcccee
Q 004738 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACN--L---VNYF-GKMVLGGSGVGEIT 166 (732)
Q Consensus 93 ~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~g--l---Vn~F-Gk~~l~~~~~~~i~ 166 (732)
.++-++.+ |||+.-.+ + -++.|.... . .||- ... .+
T Consensus 56 ------------------------~G~Da~Tl-GNHefD~~-~---l~~~l~~~~~~~~~~aN~~~~~~------pg--- 97 (255)
T 1t70_A 56 ------------------------AGAGCLTL-GNHAWHHK-D---IYPMLSEDTYPIVRPLNYADPGT------PG--- 97 (255)
T ss_dssp ------------------------HTCSEEEC-CTTTTSST-T---HHHHHHTTCSCEECCSCCCCTTC------SS---
T ss_pred ------------------------CCCCEEEe-ccccccCc-h---HHHHHhhCCCcEEEEeccCCCCC------CC---
Confidence 35666666 99998754 2 123444333 1 1221 100 00
Q ss_pred EEE-EEEeeCCeeEEEEecCCCcHHHHHhhhcChh-hHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCc
Q 004738 167 VYP-ILIRKGSTAVALYGLGNIRDERLNRMFQTPH-AVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPR 244 (732)
Q Consensus 167 i~P-vll~kG~t~vaLyGLg~irderL~~~f~~~~-~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~ 244 (732)
.| .++..++.+|++.|+--.. -+ ..|.++. .++.+.++. .-.+-|++.|.... .....-..+++.
T Consensus 98 -~g~~I~~~~G~kIgVigl~g~~--~~-~~~~~p~~~~~~~v~~l------~~d~IIv~~H~e~t---~Ek~~la~~~dg 164 (255)
T 1t70_A 98 -VGWRTFDVNGEKLTVVNLLGRV--FM-EAVDNPFRTMDALLERD------DLGTVFVDFHAEAT---SEKEAMGWHLAG 164 (255)
T ss_dssp -CSEEEEECSSSEEEEEEEECCT--TS-CCCSCHHHHHHHHTTCS------SCCEEEEEEECSCH---HHHHHHHHHHTT
T ss_pred -CCeEEEEECCEEEEEEEeecCc--Cc-ccccCHHHHHHHHHHHh------CCCEEEEEeCCCCh---HHHHHHHHhCCC
Confidence 12 3456778899998862110 00 0122221 111111111 23578999996321 110001124556
Q ss_pred CCCEEEeCcccccccCCcccCCCCceEec
Q 004738 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQ 273 (732)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~g~~I~y 273 (732)
.+|+|+-||.|.....|+.+++...++..
T Consensus 165 ~vd~VvGgHTHv~~~d~~il~~gt~~i~d 193 (255)
T 1t70_A 165 RVAAVIGTHTHVPTADTRILKGGTAYQTD 193 (255)
T ss_dssp SSSEEEEESSCSCBSCCEEETTTEEEESC
T ss_pred CeEEEEeCCCCcCCCceEEcCCCeEEEEc
Confidence 79999999999988776655442233443
No 45
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=97.38 E-value=0.00053 Score=76.86 Aligned_cols=54 Identities=15% Similarity=0.209 Sum_probs=36.2
Q ss_pred CCCccEEEEEcCCCCCCCCCchhchhcHHHHHHH-HH-------HHHHhcCCCEEEEcCCCCCCC
Q 004738 9 IANTVRILVATDCHLGYMEKDEIRRHDSFEAFEE-IC-------SIAEQKEVDFVLLGGDLFHEN 65 (732)
Q Consensus 9 ~~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFee-Il-------~~A~e~~VD~VLlaGDLFh~~ 65 (732)
....-+|+++||+|+|..... ....++.|-+ +. +.....++..||+|||+++..
T Consensus 197 ~~~~~~ialVSGL~igs~~~~---~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~ 258 (476)
T 3e0j_A 197 LDTDRFVLLVSGLGLGGGGGE---SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHS 258 (476)
T ss_dssp CSSCCEEEEECCCCBTSSCHH---HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-
T ss_pred CCCCCEEEEECCcccCCCccc---chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccc
Confidence 345679999999999965321 1234555533 32 133457899999999999875
No 46
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=97.33 E-value=0.00021 Score=76.58 Aligned_cols=78 Identities=15% Similarity=0.244 Sum_probs=52.3
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHh--------cCCCEEEEcCCCCCCCCCChhHHHHHHHHHHH
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQ--------KEVDFVLLGGDLFHENKPSRSTLVKAIEILRR 81 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e--------~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~ 81 (732)
...|||++++|+|-. +..|.++++.+.. .++|.+|+.||++|...-+.. ++.+|..
T Consensus 68 ~~~~~i~vigDiHG~------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e----vl~~l~~ 131 (342)
T 2z72_A 68 LGIKKVVALSDVHGQ------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE----VLWFMYQ 131 (342)
T ss_dssp CCCCEEEEECCCTTC------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH----HHHHHHH
T ss_pred cCCCCEEEEECCCCC------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH----HHHHHHH
Confidence 346899999999943 3457777776542 158999999999998754443 4455544
Q ss_pred hccCCCCcceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 82 HCLNDRPVQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 82 l~~gd~p~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+.. ++ ...+.+|++|.||||..
T Consensus 132 l~~------------~~----------------~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 132 LDQ------------QA----------------RDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHH------------HH----------------HHTTCEEEECCCHHHHH
T ss_pred HHH------------HH----------------hhCCCeEEEEecCCcHH
Confidence 310 00 01245799999999963
No 47
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=97.28 E-value=0.0061 Score=69.07 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=30.3
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHEN 65 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~ 65 (732)
...+||++++|.|..... +.++..|. +.++||||+.||++-..
T Consensus 114 ~~~~rfa~~sc~~~~~g~---------~~~~~~ia----~~~~D~vlhlGD~iY~d 156 (527)
T 2yeq_A 114 VPQMTFAFASCQQYEHGY---------YTAYKHMA----KEKLDLVFHLGDYIYEY 156 (527)
T ss_dssp CCCEEEEEECCCCGGGCC---------CHHHHHHT----TSCCSEEEECSCSSCCC
T ss_pred CCCeEEEEEecCCCCCCc---------cHHHHHHH----hcCCCEEEecCCcccCC
Confidence 367999999999862111 23444443 47999999999998554
No 48
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.22 E-value=0.0032 Score=65.18 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=98.7
Q ss_pred cEEEEEcCC--CCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEE-cCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004738 13 VRILVATDC--HLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLL-GGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (732)
Q Consensus 13 mRILh~SD~--HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLl-aGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~ 89 (732)
||||++.|+ |-| +.++...+...+++. |+||+ +||.|+..-.+. ...+.|.+
T Consensus 1 m~ilfiGDi~g~~G------------~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~~----~~~~~l~~-------- 55 (252)
T 2z06_A 1 MRVLFIGDVMAEPG------------LRAVGLHLPDIRDRY-DLVIANGENAARGKGLDR----RSYRLLRE-------- 55 (252)
T ss_dssp CEEEEECCBCHHHH------------HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCCH----HHHHHHHH--------
T ss_pred CEEEEEEecCCccc------------HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcCH----HHHHHHHh--------
Confidence 899999998 444 446778888888777 98776 556666653332 23333433
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCCCCCCchHHHhhhhCCceEEccceeecCCCccceeEEE
Q 004738 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGEITVYP 169 (732)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~g~~~lsaldiL~~~glVn~FGk~~l~~~~~~~i~i~P 169 (732)
.++-++ ..|||..-.+ + .++.|.....+. ...++. +.. ..|
T Consensus 56 ---------------------------~G~D~~-T~GNHefD~~-~---l~~~l~~~~~vr---paN~~~-~~p---g~~ 96 (252)
T 2z06_A 56 ---------------------------AGVDLV-SLGNHAWDHK-E---VYALLESEPVVR---PLNYPP-GTP---GKG 96 (252)
T ss_dssp ---------------------------HTCCEE-ECCTTTTSCT-T---HHHHHHHSSEEC---CTTSCS-SCS---SCS
T ss_pred ---------------------------CCCCEE-EeccEeeECc-h---HHHHhccCCceE---eecCCC-CCC---CCC
Confidence 366665 5599998765 2 223343222110 000000 000 012
Q ss_pred -EEEeeCCeeEEEEecCCCcHHHHHhhhcChhhHhhcChhhhhhccCCCceEEEEEcccCCCCCCccccccccCCcCCCE
Q 004738 170 -ILIRKGSTAVALYGLGNIRDERLNRMFQTPHAVQWMRPEAQEECQVSDWFNILVLHQNRVKTNPKNAINEHFLPRFLDF 248 (732)
Q Consensus 170 -vll~kG~t~vaLyGLg~irderL~~~f~~~~~v~~l~P~~~~~~~~~~~fnILvlHqn~~~~~~~~~I~e~lLp~~~Dy 248 (732)
.++.+++.+|++.|+--.. -+ ..|.++ +..+.... +... -.+-|+++|.... .....-..+++..+|+
T Consensus 97 ~~i~~~~G~kIgVi~l~g~~--~~-~~~~~p--f~~~~~~v-~~lk--~d~IIv~~H~g~t---sek~~la~~~dg~Vd~ 165 (252)
T 2z06_A 97 FWRLEVGGESLLFVQVMGRI--FM-DPLDDP--FRALDRLL-EEEK--ADYVLVEVHAEAT---SEKMALAHYLDGRASA 165 (252)
T ss_dssp EEEEEETTEEEEEEEEECCT--TS-CCCCCH--HHHHHHHH-HHCC--CSEEEEEEECSCH---HHHHHHHHHHBTTBSE
T ss_pred eEEEEECCEEEEEEEccccc--Cc-cccCCH--HHHHHHHH-HHhC--CCEEEEEeCCCcH---HHHHHHHHhCCCCeEE
Confidence 3456788899988762110 00 012222 11111111 1111 4578999997421 0000111245567999
Q ss_pred EEeCcccccccCCcccCCCCceEec
Q 004738 249 VVWGHEHECLIDPQEVPGMGFHLTQ 273 (732)
Q Consensus 249 Va~GH~H~~~i~Pq~~~~~g~~I~y 273 (732)
|+-||.|....+|+.+++...++.+
T Consensus 166 VvGgHTHv~t~d~~il~~gt~~itd 190 (252)
T 2z06_A 166 VLGTHTHVPTLDATRLPKGTLYQTD 190 (252)
T ss_dssp EEEESSCSCBSCCEECTTSCEEESC
T ss_pred EEcCCCCcCCCccEEcCCCcEeecC
Confidence 9999999988877766543344454
No 49
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=97.03 E-value=0.00084 Score=71.38 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=53.3
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004738 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~ 91 (732)
.++|.+++|+|-- +..|.++++.+.....+.+|+.||++|...-+.. ++.+|..+.
T Consensus 49 ~~~i~viGDIHG~------------~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk-------- 104 (309)
T 2ie4_C 49 RCPVTVCGDVHGQ------------FHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE----TVTLLVALK-------- 104 (309)
T ss_dssp CSSEEEECCCTTC------------HHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH----HHHHHHHHH--------
T ss_pred cCCEEEEecCCCC------------HHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH----HHHHHHHHH--------
Confidence 3789999999943 4467888887766677889999999998755544 455555432
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCCC
Q 004738 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDPA 132 (732)
Q Consensus 92 e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p~ 132 (732)
+ ...-.|+++.||||...
T Consensus 105 ----------------~-------~~p~~v~~lrGNHE~~~ 122 (309)
T 2ie4_C 105 ----------------V-------RYRERITILRGNHESRQ 122 (309)
T ss_dssp ----------------H-------HCTTTEEECCCTTSSTT
T ss_pred ----------------h-------hCCCcEEEEeCCCCHHH
Confidence 0 11336999999999864
No 50
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.98 E-value=0.0012 Score=73.22 Aligned_cols=74 Identities=20% Similarity=0.199 Sum_probs=51.9
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcC-CCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCc
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKE-VDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPV 89 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~-VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~ 89 (732)
..|||++++|+|-- +..|.++++.+.... .|.+|+.||++|...-+.. ++.+|..+.
T Consensus 211 ~~~~~~vigDiHG~------------~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~e----~~~~l~~l~------ 268 (477)
T 1wao_1 211 ETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE----VILTLFGFK------ 268 (477)
T ss_dssp SSCEEEEECBCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH----HHHHHHHHH------
T ss_pred CCcceEEEeCCCCC------------HHHHHHHHHHcCCCCCcCeEEEeccccCCCcchHH----HHHHHHHHH------
Confidence 46899999999943 446777777765443 4569999999998765554 444444331
Q ss_pred ceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 90 QFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 90 ~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+ ...-+|++|.||||..
T Consensus 269 ------------------~-------~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 269 ------------------L-------LYPDHFHLLRGNHETD 285 (477)
T ss_dssp ------------------H-------HSTTTEEEECCTTSSH
T ss_pred ------------------h-------hCCCceEeecCCccHH
Confidence 0 1245799999999964
No 51
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.85 E-value=0.0014 Score=70.33 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=52.8
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~e 92 (732)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-|.. ++.+|..+.
T Consensus 57 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk--------- 111 (330)
T 1fjm_A 57 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE----TICLLLAYK--------- 111 (330)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH----HHHHHHHHH---------
T ss_pred CceEEecCCCCC------------HHHHHHHHHHhCCCCcceEEeCCCcCCCCCChHH----HHHHHHHhh---------
Confidence 679999999944 4567888887766677889999999998755554 455555431
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 93 ~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+ ...-.|+++.||||..
T Consensus 112 ---------------~-------~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 112 ---------------I-------KYPENFFLLRGNHECA 128 (330)
T ss_dssp ---------------H-------HSTTTEEECCCTTSSH
T ss_pred ---------------h-------hcCCceEEecCCchHh
Confidence 0 1134699999999975
No 52
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.73 E-value=0.0031 Score=67.26 Aligned_cols=75 Identities=20% Similarity=0.186 Sum_probs=51.7
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCC
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRP 88 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p 88 (732)
...+||.+++|+|-- +..|.++++.+..... +.+|+.||++|...-+.. ++.+|..+.
T Consensus 57 p~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e----vl~lL~~lk----- 115 (315)
T 3h63_A 57 KETEKITVCGDTHGQ------------FYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVE----VILTLFGFK----- 115 (315)
T ss_dssp CTTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHHH----HHHHHHHHH-----
T ss_pred CCCceEEEEecCCCC------------HHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChHH----HHHHHHHhh-----
Confidence 346899999999965 4567777776654433 459999999998865554 344444431
Q ss_pred cceeeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 89 VQFQVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 89 ~~~e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+ ...-.|+++.||||..
T Consensus 116 -------------------~-------~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 116 -------------------L-------LYPDHFHLLRGNHETD 132 (315)
T ss_dssp -------------------H-------HSTTTEEEECCTTSSH
T ss_pred -------------------h-------hcCCcEEEEecCcccc
Confidence 0 1123699999999964
No 53
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.0038 Score=67.13 Aligned_cols=50 Identities=20% Similarity=0.155 Sum_probs=37.7
Q ss_pred CccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCC-CEEEEcCCCCCCCCCChhHH
Q 004738 11 NTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEV-DFVLLGGDLFHENKPSRSTL 72 (732)
Q Consensus 11 ~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~V-D~VLlaGDLFh~~kPs~~tl 72 (732)
..|||.+++|+|-- +..|.++++.+..... +.+|+.||++|...-+..++
T Consensus 62 ~~~ri~viGDIHG~------------~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~evl 112 (335)
T 3icf_A 62 PDVKISVCGDTHGQ------------FYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVA 112 (335)
T ss_dssp TTCEEEEECCCTTC------------HHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHHHH
T ss_pred cCceEEEEecCCCC------------HHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHHHH
Confidence 67999999999986 4467777777654433 46999999999886665533
No 54
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.64 E-value=0.0026 Score=67.46 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=53.2
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCccee
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQFQ 92 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~e 92 (732)
++|.+++|+|-- +..|.++++.+.....+.+|+.||++|...-+.. ++.+|..+.
T Consensus 56 ~~i~viGDIHG~------------~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~e----vl~lL~~lk--------- 110 (299)
T 3e7a_A 56 APLKICGDIHGQ------------YYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE----TICLLLAYK--------- 110 (299)
T ss_dssp SSEEEECBCTTC------------HHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH----HHHHHHHHH---------
T ss_pred CCEEEEecCCCC------------HHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHH----HHHHHHHHH---------
Confidence 579999999976 4578888888777778889999999998865554 444444431
Q ss_pred eechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 93 VVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 93 ~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+ ...-.|+++.||||..
T Consensus 111 ---------------~-------~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 111 ---------------I-------KYPENFFLLRGNHECA 127 (299)
T ss_dssp ---------------H-------HSTTTEEECCCTTSSH
T ss_pred ---------------h-------hCCCcEEEEecCchhh
Confidence 0 1133599999999974
No 55
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.40 E-value=0.0041 Score=70.32 Aligned_cols=73 Identities=18% Similarity=0.167 Sum_probs=52.4
Q ss_pred ccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHhccCCCCcce
Q 004738 12 TVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRHCLNDRPVQF 91 (732)
Q Consensus 12 ~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l~~gd~p~~~ 91 (732)
.++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.. ++.+|..+.
T Consensus 82 ~~pI~VIGDIHGq------------~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E----vl~lL~aLk-------- 137 (521)
T 1aui_A 82 DAPVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE----CVLYLWALK-------- 137 (521)
T ss_dssp CSSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH----HHHHHHHHH--------
T ss_pred ccceeeccCCCCC------------HHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH----HHHHHHHHh--------
Confidence 3679999999954 4567788876555567999999999998865654 445554432
Q ss_pred eeechhhhhcccccCccccCCCCCCCCCcEEEEcCCCCCC
Q 004738 92 QVVSDQAVNFQNKFGHVNYEDPHFNVGLPVFSIHGNHDDP 131 (732)
Q Consensus 92 e~lSd~~~~F~~~f~~lNyedpn~n~~IPVf~I~GNHD~p 131 (732)
+ ...-.|++|.||||..
T Consensus 138 ----------------~-------~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 138 ----------------I-------LYPKTLFLLRGNHECR 154 (521)
T ss_dssp ----------------H-------HSTTTEEECCCTTSSH
T ss_pred ----------------h-------hCCCeEEEecCCccHH
Confidence 0 1133599999999975
No 56
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.39 E-value=0.0045 Score=67.14 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=41.2
Q ss_pred cEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCChhHHHHHHHHHHHh
Q 004738 13 VRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFHENKPSRSTLVKAIEILRRH 82 (732)
Q Consensus 13 mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh~~kPs~~tl~~~~elLr~l 82 (732)
++|.+++|+|-- +..|.++++.+.....|.+|+.||++|...-+.+ ++.+|..+
T Consensus 70 ~pi~ViGDIHG~------------~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~E----vl~lL~~l 123 (357)
T 3ll8_A 70 APVTVCGDIHGQ------------FFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE----CVLYLWAL 123 (357)
T ss_dssp SSEEEECCCTTC------------HHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHHH----HHHHHHHH
T ss_pred ccceeeccCCCC------------HHHHHHHHHhcCCCCCcEEEECCCccCCCcChHH----HHHHHHHh
Confidence 579999999976 4467788887777778999999999999865554 44445443
No 57
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=93.04 E-value=0.17 Score=56.63 Aligned_cols=51 Identities=12% Similarity=0.258 Sum_probs=41.1
Q ss_pred CCccEEEEEcCCCCCCCCCchhchhcHHHHHHHHHHHHHhc-CCCEEEEcCCCCCCCCC
Q 004738 10 ANTVRILVATDCHLGYMEKDEIRRHDSFEAFEEICSIAEQK-EVDFVLLGGDLFHENKP 67 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e~d~~R~~Ds~~aFeeIl~~A~e~-~VD~VLlaGDLFh~~kP 67 (732)
...++|+++|.-+-..... .|+-|+++++.+.+. +||++|+.|.+.|...|
T Consensus 145 ~~~l~ivvAsGPyT~sdnl-------~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp 196 (460)
T 3flo_A 145 GSSLKVIVTCGPYFANDNF-------SLELLQEFIDSINNEVKPHVLIMFGPFIDITHP 196 (460)
T ss_dssp SSCEEEEEEESCCSCSSCC-------CCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCH
T ss_pred CCCcEEEEEeCCccCCCcc-------ChHHHHHHHHHHHhccCCCEEEEecCcccccCc
Confidence 3679999999988765322 256789999998885 89999999999988754
No 58
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=81.70 E-value=0.3 Score=44.85 Aligned_cols=14 Identities=100% Similarity=1.880 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCC
Q 004738 585 RGRGRGRGRGRGRG 598 (732)
Q Consensus 585 ~~~~~~~~~~~~~~ 598 (732)
||||||||||||||
T Consensus 102 ~grgrgrg~gr~~~ 115 (119)
T 1b34_A 102 RGRGRGRGRGRGRG 115 (119)
T ss_dssp --------------
T ss_pred CcCCCCCCCCCCCC
Confidence 33444444444443
No 59
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=75.26 E-value=0.58 Score=42.94 Aligned_cols=15 Identities=93% Similarity=1.730 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCCC
Q 004738 584 TRGRGRGRGRGRGRG 598 (732)
Q Consensus 584 ~~~~~~~~~~~~~~~ 598 (732)
++|+|+|||||||||
T Consensus 97 ~~~~g~grgrgrg~g 111 (119)
T 1b34_A 97 GRGRGRGRGRGRGRG 111 (119)
T ss_dssp ---------------
T ss_pred CCCCCCcCCCCCCCC
Confidence 345555555555555
No 60
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=62.31 E-value=3.6 Score=40.27 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=22.5
Q ss_pred cCCCEEEeCcccccccCCcccCCCCceEecCCCC
Q 004738 244 RFLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSS 277 (732)
Q Consensus 244 ~~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~ 277 (732)
.+.|+|+.||+|...+ .... +..++.|||.
T Consensus 177 ~~~~~vv~GHth~~~~--~~~~--~~~~in~Gs~ 206 (221)
T 1g5b_A 177 KGADTFIFGHTPAVKP--LKFA--NQMYIDTGAV 206 (221)
T ss_dssp BTSSEEEECSSCCSSC--EEET--TEEECCCCHH
T ss_pred cCCCEEEECCCCCccc--eeeC--CEEEEECCCC
Confidence 4579999999998753 2332 4688999985
No 61
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=46.02 E-value=35 Score=30.25 Aligned_cols=19 Identities=53% Similarity=0.788 Sum_probs=13.4
Q ss_pred HHHHHHHHHhcCCCEEEEc
Q 004738 40 FEEICSIAEQKEVDFVLLG 58 (732)
Q Consensus 40 FeeIl~~A~e~~VD~VLla 58 (732)
.+.|++.|.++++|+|+++
T Consensus 98 ~~~I~~~a~~~~~dliV~G 116 (150)
T 3tnj_A 98 REEIIRIAEQENVDLIVVG 116 (150)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 3567777777777777776
No 62
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=45.40 E-value=35 Score=34.74 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=12.5
Q ss_pred HHHHhcCCCEEEEcC
Q 004738 45 SIAEQKEVDFVLLGG 59 (732)
Q Consensus 45 ~~A~e~~VD~VLlaG 59 (732)
+.+.+...|+|+++|
T Consensus 30 ~~~~~~GtDaI~vGg 44 (235)
T 3w01_A 30 DAICMSQTDAIMIGG 44 (235)
T ss_dssp HHHHTSSCSEEEECC
T ss_pred HHHHHcCCCEEEECC
Confidence 335688999999999
No 63
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=39.32 E-value=33 Score=34.74 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=12.8
Q ss_pred HHHHHhcCCCEEEEcC
Q 004738 44 CSIAEQKEVDFVLLGG 59 (732)
Q Consensus 44 l~~A~e~~VD~VLlaG 59 (732)
++.+.+...|+|+++|
T Consensus 24 ~~~~~~~GtD~i~vGG 39 (228)
T 3vzx_A 24 LEILCESGTDAVIIGG 39 (228)
T ss_dssp HHHHHTSSCSEEEECC
T ss_pred HHHHHHcCCCEEEECC
Confidence 3344688999999999
No 64
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=39.30 E-value=37 Score=30.03 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=34.0
Q ss_pred CCcCCCCccEEEEEcCCCCCCCC------CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004738 5 PREDIANTVRILVATDCHLGYME------KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (732)
Q Consensus 5 ~~~~~~~~mRILh~SD~HLG~~e------~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh 63 (732)
+......+++||++.|...-... .... .-......+++++.+.+..+|+||+-=++-+
T Consensus 7 ~~~~~~~~~~ILivdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~ 70 (153)
T 3hv2_A 7 NVATVTRRPEILLVDSQEVILQRLQQLLSPLPY-TLHFARDATQALQLLASREVDLVISAAHLPQ 70 (153)
T ss_dssp CCCCCCSCCEEEEECSCHHHHHHHHHHHTTSSC-EEEEESSHHHHHHHHHHSCCSEEEEESCCSS
T ss_pred chhhccCCceEEEECCCHHHHHHHHHHhcccCc-EEEEECCHHHHHHHHHcCCCCEEEEeCCCCc
Confidence 33445667899999886532110 0000 0011234567777778889999999766654
No 65
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=38.67 E-value=66 Score=28.82 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=10.0
Q ss_pred CCCcEEEEcCCC
Q 004738 117 VGLPVFSIHGNH 128 (732)
Q Consensus 117 ~~IPVf~I~GNH 128 (732)
..+||++|+..|
T Consensus 150 ~~~pVlvv~~~~ 161 (162)
T 1mjh_A 150 SNKPVLVVKRKN 161 (162)
T ss_dssp CCSCEEEECCCC
T ss_pred CCCCEEEEeCCC
Confidence 579999998765
No 66
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=34.43 E-value=59 Score=28.32 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhcCCCEEEEcCC
Q 004738 39 AFEEICSIAEQKEVDFVLLGGD 60 (732)
Q Consensus 39 aFeeIl~~A~e~~VD~VLlaGD 60 (732)
.-+.|++.|.+.++|+|+++--
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCC
Confidence 3477888888999998888754
No 67
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=31.07 E-value=95 Score=28.05 Aligned_cols=16 Identities=19% Similarity=0.318 Sum_probs=11.8
Q ss_pred CCCCcEEEEcCCCCCC
Q 004738 116 NVGLPVFSIHGNHDDP 131 (732)
Q Consensus 116 n~~IPVf~I~GNHD~p 131 (732)
+..+||++++...+..
T Consensus 146 ~~~~PVlvv~~~~~~~ 161 (170)
T 2dum_A 146 KTKKPVLIIKEVDENE 161 (170)
T ss_dssp HCSSCEEEECCCCCC-
T ss_pred hCCCCEEEEccCCccc
Confidence 3579999999776654
No 68
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=30.41 E-value=73 Score=27.74 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhcCCCEEEEcC
Q 004738 39 AFEEICSIAEQKEVDFVLLGG 59 (732)
Q Consensus 39 aFeeIl~~A~e~~VD~VLlaG 59 (732)
..++|++.|.++++|+|+++-
T Consensus 94 ~~~~I~~~a~~~~~dliV~G~ 114 (143)
T 3fdx_A 94 PKDKILALAKSLPADLVIIAS 114 (143)
T ss_dssp HHHHHHHHHHHTTCSEEEEES
T ss_pred hHHHHHHHHHHhCCCEEEEeC
Confidence 457788888888888888875
No 69
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=30.18 E-value=76 Score=30.50 Aligned_cols=28 Identities=21% Similarity=0.131 Sum_probs=21.0
Q ss_pred hcHHHHHHHHHHHHHhc-CCCEEEEcCCC
Q 004738 34 HDSFEAFEEICSIAEQK-EVDFVLLGGDL 61 (732)
Q Consensus 34 ~Ds~~aFeeIl~~A~e~-~VD~VLlaGDL 61 (732)
.|..+.+.+.+..+.++ ++|+||.+|=+
T Consensus 63 ~Dd~~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 63 PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 45567777777777665 59999999965
No 70
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.14 E-value=76 Score=27.45 Aligned_cols=21 Identities=10% Similarity=0.259 Sum_probs=18.9
Q ss_pred HHHHHHHHHhcCCCEEEEcCC
Q 004738 40 FEEICSIAEQKEVDFVLLGGD 60 (732)
Q Consensus 40 FeeIl~~A~e~~VD~VLlaGD 60 (732)
+++++..++..++-+|++|.|
T Consensus 20 ~~~v~kai~~gka~lViiA~D 40 (99)
T 3j21_Z 20 SNETIRLAKTGGAKLIIVAKN 40 (99)
T ss_dssp HHHHHHHHHHTCCSEEEEECC
T ss_pred HHHHHHHHHcCCccEEEEeCC
Confidence 577888888999999999999
No 71
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=25.13 E-value=61 Score=28.70 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=19.3
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC
Q 004738 40 FEEICSIAEQKEVDFVLLGGDL 61 (732)
Q Consensus 40 FeeIl~~A~e~~VD~VLlaGDL 61 (732)
+++++..++..++-+||+|.|.
T Consensus 26 ~~~v~kai~~gka~lViiA~D~ 47 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNI 47 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTC
T ss_pred HHHHHHHHHcCCceEEEEeCCC
Confidence 5677888888999999999997
No 72
>3men_A Acetylpolyamine aminohydrolase; histone deacetylase; 2.20A {Burkholderia pseudomallei 1710B}
Probab=24.60 E-value=1.4e+02 Score=32.29 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=30.6
Q ss_pred cHHHHHHHHHHHHHhcCCCEEEEc-------CCCCCCCCCChhHHHHHHHHHH
Q 004738 35 DSFEAFEEICSIAEQKEVDFVLLG-------GDLFHENKPSRSTLVKAIEILR 80 (732)
Q Consensus 35 Ds~~aFeeIl~~A~e~~VD~VLla-------GDLFh~~kPs~~tl~~~~elLr 80 (732)
+...+|++++..+.+.+||+||+. ||=+-.-+-+...+.++.+.|+
T Consensus 275 ~yl~~~~~~l~~l~~f~PdlIvvsaG~Da~~~Dplg~l~lt~~~~~~~~~~l~ 327 (362)
T 3men_A 275 AFFERVDDALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIG 327 (362)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEEECSTTBTTCTTCCBCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECcccCcCCCCCCCccCCHHHHHHHHHHHH
Confidence 445789999988889999998873 3333233345666666555554
No 73
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=24.12 E-value=2e+02 Score=24.27 Aligned_cols=54 Identities=13% Similarity=-0.035 Sum_probs=29.9
Q ss_pred CCccEEEEEcCCCCCCCC-----CchhchhcHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004738 10 ANTVRILVATDCHLGYME-----KDEIRRHDSFEAFEEICSIAEQKEVDFVLLGGDLFH 63 (732)
Q Consensus 10 ~~~mRILh~SD~HLG~~e-----~d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaGDLFh 63 (732)
..++|||++.|...-... ......-......+++++.+.+..+|+||+--++-+
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~ 63 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHAPDVIITDIRMPK 63 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHCCSEEEECSSCSS
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccCCCEEEEeCCCCC
Confidence 356899999886532110 000000011223466677777889999999766654
No 74
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=23.99 E-value=1.2e+02 Score=26.48 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=11.4
Q ss_pred HHHHHH-HHHhcCCCEEEEc
Q 004738 40 FEEICS-IAEQKEVDFVLLG 58 (732)
Q Consensus 40 FeeIl~-~A~e~~VD~VLla 58 (732)
.++|++ .|.+.++|+|+++
T Consensus 96 ~~~I~~~~a~~~~~dliV~G 115 (146)
T 3s3t_A 96 KHTIEDYAKQHPEIDLIVLG 115 (146)
T ss_dssp HHHHHHHHHHSTTCCEEEEE
T ss_pred HHHHHHHHHhhcCCCEEEEC
Confidence 355566 5666666666665
No 75
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=22.78 E-value=1.5e+02 Score=27.09 Aligned_cols=24 Identities=25% Similarity=0.289 Sum_probs=19.5
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCCC
Q 004738 40 FEEICSIAEQKEVDFVLLGGDLFH 63 (732)
Q Consensus 40 FeeIl~~A~e~~VD~VLlaGDLFh 63 (732)
..+++..+...++-+||+|.|.-.
T Consensus 29 ~~~v~Kai~~gka~LViiA~D~~p 52 (126)
T 2xzm_U 29 LHEVLRTIEAKQALFVCVAEDCDQ 52 (126)
T ss_dssp HHHHHHHHHHTCCSEEEEESSCCS
T ss_pred HHHHHHHHHcCCceEEEEeCCCCh
Confidence 356777778899999999999753
No 76
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=22.74 E-value=1.8e+02 Score=27.48 Aligned_cols=24 Identities=25% Similarity=0.313 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCC
Q 004738 38 EAFEEICSIAEQKEVDFVLLGGDL 61 (732)
Q Consensus 38 ~aFeeIl~~A~e~~VD~VLlaGDL 61 (732)
+.+.+.+..+.+.++|+||.+|=+
T Consensus 53 ~~i~~al~~a~~~~~DlVittGG~ 76 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVDVILTSGGT 76 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCC
Confidence 777777777766689999999976
No 77
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=22.05 E-value=83 Score=31.67 Aligned_cols=45 Identities=11% Similarity=-0.105 Sum_probs=27.8
Q ss_pred CCCEEEeCcccccccCCcccCCCCceEecCCCCcccccccCccCCCeEEEEEEeCCe
Q 004738 245 FLDFVVWGHEHECLIDPQEVPGMGFHLTQPGSSVATSLIEGESKPKHVLLLEIKENQ 301 (732)
Q Consensus 245 ~~DyVa~GH~H~~~i~Pq~~~~~g~~I~yPGS~vatS~~egE~~~Kgv~LLeI~~~~ 301 (732)
+.++|+.||+|...+. .....+...+.||+.. .....++.+..++
T Consensus 196 g~~~vvfGHt~~~~~~--~~~~~~~i~IDtG~~~----------gG~Lt~l~l~~~~ 240 (262)
T 2qjc_A 196 GPETVVFGHDARRGLQ--EQYKPLAIGLDSRCVY----------GGRLSAAVFPGGC 240 (262)
T ss_dssp CSSEEEECCCGGGCCB--CTTTTTEEECCCBGGG----------TSEEEEEEETTTE
T ss_pred CCCEEEECCCcccccc--ccCCCCEEEeeCcccc----------CCeeEEEEEcCCc
Confidence 5789999999986432 2221135678888742 1245666676553
No 78
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=21.90 E-value=2.8e+02 Score=27.43 Aligned_cols=54 Identities=17% Similarity=0.307 Sum_probs=37.7
Q ss_pred chhchhcHHHHHHHHHHHHHhcCCCEEEEcC-CCCCCCCCChhHHHHHHHHHHHhc
Q 004738 29 DEIRRHDSFEAFEEICSIAEQKEVDFVLLGG-DLFHENKPSRSTLVKAIEILRRHC 83 (732)
Q Consensus 29 d~~R~~Ds~~aFeeIl~~A~e~~VD~VLlaG-DLFh~~kPs~~tl~~~~elLr~l~ 83 (732)
++..+....+.|++.++.|.+.++..|++.| +.+. .......+.++++.|+++|
T Consensus 99 d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~-~~~~~~~~~~~~~~l~~l~ 153 (295)
T 3cqj_A 99 DDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYY-QEANNETRRRFRDGLKESV 153 (295)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSS-SCCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCc-CcCHHHHHHHHHHHHHHHH
Confidence 4445566788999999999999999998764 3321 2234556667777777664
No 79
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=20.55 E-value=91 Score=26.98 Aligned_cols=21 Identities=5% Similarity=0.139 Sum_probs=18.8
Q ss_pred HHHHHHHHHhcCCCEEEEcCC
Q 004738 40 FEEICSIAEQKEVDFVLLGGD 60 (732)
Q Consensus 40 FeeIl~~A~e~~VD~VLlaGD 60 (732)
+++++..++..++-+|++|.|
T Consensus 21 ~~~v~kai~~gka~lViiA~D 41 (101)
T 1w41_A 21 ARKSIQYAKMGGAKLIIVARN 41 (101)
T ss_dssp HHHHHHHHHHTCCSEEEEETT
T ss_pred HHHHHHHHHcCCCcEEEEeCC
Confidence 577888888999999999999
No 80
>3q9b_A Acetylpolyamine amidohydrolase; HDAC, polyamines, arginase fold, deacetylase, hydrolase-HYDR inhibitor complex; HET: B3N; 2.25A {Mycoplana ramosa} PDB: 3q9f_A* 3q9c_A* 3q9e_A*
Probab=20.24 E-value=1.5e+02 Score=31.81 Aligned_cols=47 Identities=9% Similarity=-0.045 Sum_probs=31.3
Q ss_pred cHHHHHHHHHHHHHhcCCCEEEEc-------CCCCCCCCCChhHHHHHHHHHHH
Q 004738 35 DSFEAFEEICSIAEQKEVDFVLLG-------GDLFHENKPSRSTLVKAIEILRR 81 (732)
Q Consensus 35 Ds~~aFeeIl~~A~e~~VD~VLla-------GDLFh~~kPs~~tl~~~~elLr~ 81 (732)
+...+|++++..+.+.+||+||+. ||=+-.-+-+...+.++.+.|+.
T Consensus 257 ~y~~~~~~~l~~l~~f~Pd~ivvsaG~D~~~~Dplg~~~lt~~~~~~~~~~l~~ 310 (341)
T 3q9b_A 257 VWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGRTIAA 310 (341)
T ss_dssp HHHHHHHHHHHHHHHHTCSCEEEEECCTTBTTCTTCCCBBCTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEeCCccccCCCCCCCccCCHHHHHHHHHHHHH
Confidence 445789999988889999998873 34333333456666666665543
No 81
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=20.13 E-value=1e+02 Score=28.00 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=11.4
Q ss_pred CCCCcEEEEcCCCCC
Q 004738 116 NVGLPVFSIHGNHDD 130 (732)
Q Consensus 116 n~~IPVf~I~GNHD~ 130 (732)
+..+||++|+.+...
T Consensus 153 ~a~~pVlvv~~~~~~ 167 (175)
T 2gm3_A 153 HAECPVMTIKRNADE 167 (175)
T ss_dssp HCSSCEEEEECCGGG
T ss_pred CCCCCEEEEcCCcCC
Confidence 357999999977543
No 82
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=20.09 E-value=1.4e+02 Score=31.75 Aligned_cols=27 Identities=26% Similarity=0.250 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCC
Q 004738 37 FEAFEEICSIAEQKEVDFVLLGGDLFH 63 (732)
Q Consensus 37 ~~aFeeIl~~A~e~~VD~VLlaGDLFh 63 (732)
-..+..+.+...+++||+|++.||.+.
T Consensus 80 ~~~~~~l~~~l~~~kPD~Vlv~gd~~~ 106 (385)
T 4hwg_A 80 GLVIEKVDEVLEKEKPDAVLFYGDTNS 106 (385)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCSGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCchH
Confidence 356677777888999999999999763
Done!