Query 004741
Match_columns 732
No_of_seqs 160 out of 283
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 04:18:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2b1e_A Exocyst complex compone 59.3 62 0.0021 36.7 12.5 96 285-383 120-222 (564)
2 3swy_A Cyclic nucleotide-gated 57.0 44 0.0015 24.9 7.0 44 118-161 2-45 (46)
3 2xdj_A Uncharacterized protein 56.8 78 0.0027 26.5 9.5 62 104-165 10-71 (83)
4 2v66_B Nuclear distribution pr 50.3 1.3E+02 0.0046 26.5 10.6 63 100-162 35-100 (111)
5 2d2s_A Exocyst complex compone 49.8 2.1E+02 0.007 28.5 19.6 166 257-455 66-233 (235)
6 4akv_A Sorting nexin-33; trans 48.9 1.4E+02 0.0049 31.9 12.7 180 95-298 183-368 (386)
7 3vmx_A Voltage-gated hydrogen 47.3 78 0.0027 23.7 6.9 31 106-136 3-33 (48)
8 2akf_A Coronin-1A; coiled coil 47.1 26 0.00089 23.3 3.8 28 104-131 3-30 (32)
9 3mq9_A Bone marrow stromal ant 44.1 41 0.0014 36.8 7.6 93 89-182 341-440 (471)
10 2pft_A Exocytosis protein; hel 42.3 2.1E+02 0.0072 32.2 13.4 43 348-396 203-245 (571)
11 3swf_A CGMP-gated cation chann 41.1 67 0.0023 26.3 6.3 47 118-164 4-50 (74)
12 1wrd_A TOM1, target of MYB pro 40.6 54 0.0019 28.5 6.3 56 107-164 43-98 (103)
13 3r2p_A Apolipoprotein A-I; amp 39.5 2.5E+02 0.0085 26.6 11.5 99 100-199 71-171 (185)
14 3a2a_A Voltage-gated hydrogen 35.4 51 0.0017 25.3 4.4 34 103-136 7-40 (58)
15 1ez3_A Syntaxin-1A; three heli 31.9 2.6E+02 0.0087 24.4 10.2 61 100-160 47-116 (127)
16 3p8c_D Wiskott-aldrich syndrom 31.5 65 0.0022 33.2 6.0 65 101-169 30-94 (279)
17 2bez_C E2 glycoprotein; coiled 31.3 2.2E+02 0.0075 23.4 10.3 66 100-165 9-74 (77)
18 3oja_B Anopheles plasmodium-re 31.0 1.8E+02 0.0063 32.4 10.5 21 142-162 561-581 (597)
19 2fji_1 Exocyst complex compone 29.8 5.2E+02 0.018 27.3 23.6 231 451-731 11-250 (399)
20 1wyy_A E2 glycoprotein; membra 25.9 3.9E+02 0.013 24.5 9.8 68 100-167 22-89 (149)
21 2qyw_A Vesicle transport throu 25.2 1.6E+02 0.0053 25.4 6.6 66 98-165 8-75 (102)
22 1i6z_A BAG-family molecular ch 25.2 3.1E+02 0.011 25.0 8.7 29 106-134 17-48 (135)
23 1s94_A S-syntaxin; three helix 23.1 2.1E+02 0.007 26.9 7.7 65 100-164 78-151 (180)
24 1fio_A SSO1 protein; four heli 22.5 2.5E+02 0.0087 26.4 8.3 64 100-164 46-109 (196)
25 1hx1_B BAG-1, BAG-family molec 22.5 60 0.002 28.8 3.3 59 106-172 7-68 (114)
26 3zbh_A ESXA; unknown function, 22.3 3.1E+02 0.011 22.2 10.2 32 97-128 13-44 (99)
27 3o0z_A RHO-associated protein 22.2 4.1E+02 0.014 25.1 9.2 33 99-131 40-72 (168)
28 2d9d_A BAG family molecular ch 22.0 1.1E+02 0.0038 25.5 4.6 72 102-198 9-81 (89)
29 2gd5_A Charged multivesicular 21.6 3.5E+02 0.012 25.4 9.0 68 96-167 10-85 (179)
30 1l8d_A DNA double-strand break 21.6 3.1E+02 0.01 23.4 8.0 76 100-175 10-100 (112)
31 2xhe_B Syntaxin1; exocytosis, 21.6 3.7E+02 0.013 27.0 9.8 60 101-160 86-159 (279)
32 3abh_A Pacsin2, protein kinase 21.5 1.7E+02 0.0059 29.8 7.3 48 129-176 207-262 (312)
33 3m0d_C TNF receptor-associated 21.2 3E+02 0.01 21.6 9.5 40 100-139 6-45 (65)
34 3vem_A Helicase protein MOM1; 20.7 4.4E+02 0.015 23.3 10.2 40 92-133 30-69 (115)
35 2vs0_A Virulence factor ESXA; 20.2 3.4E+02 0.012 21.8 9.4 32 97-128 10-41 (97)
36 3zbh_A ESXA; unknown function, 20.1 2.6E+02 0.0089 22.7 7.0 30 104-133 13-42 (99)
No 1
>2b1e_A Exocyst complex component EXO70; tethering complex, endocytosis/exocytosis complex; 2.00A {Saccharomyces cerevisiae} PDB: 2b7m_A 2pfv_A
Probab=59.33 E-value=62 Score=36.67 Aligned_cols=96 Identities=13% Similarity=0.160 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHhhccCcchHHHHHHhhCCcchhhhhhhhh---hhhhhcCCCCCCCCCchhhhHHHHHHHHHHHHHHHHh
Q 004741 285 LSTMSECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNAD---VRLVLGDQGSQASPSNVARGLASLYKEITDTVRKEAA 361 (732)
Q Consensus 285 ~~~M~~~A~iL~~fngG~s~I~~fV~k~~~Fid~~~~~~~---~~~~l~~~~~~~~~~~~~~~L~~~f~~I~~~v~~e~~ 361 (732)
...++.+|.-+..-..+..|++.|...|-=+++... ... ... ...+ ...........+......+..++..|..
T Consensus 120 l~~L~~Ia~~m~~~g~~~~~~~iY~~~R~~~l~~sL-~~L~~~~k~-~~~~-~~~~~e~~~~~i~~~~~a~~~l~~~E~~ 196 (564)
T 2b1e_A 120 LGALSWILDYFHGNSEGSIIQDILVGERSKLILKCM-AFLEPFAKE-ISTA-KNAPYEKGSSGMNSYTEALLGFIANEKS 196 (564)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH-TTTSTTCC--------------CCSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHH-HHhhhhccc-cccc-cCCchhhhccHHHHHHHHHHHHHHHHHH
Confidence 367888888777775566799999987765555431 100 000 0000 0000111124456777788999999999
Q ss_pred HHhhcCCC----chHHHHHHHHHHHH
Q 004741 362 TITAVFPS----PNYVMSILVQRVLE 383 (732)
Q Consensus 362 iI~~VFp~----p~~Vm~~FvqrIf~ 383 (732)
+++.|||. ...++..+++....
T Consensus 197 L~~~vf~~~~~~~~~~f~~i~~~~l~ 222 (564)
T 2b1e_A 197 LVDDLYSQYTESKPHVLSQILSPLIS 222 (564)
T ss_dssp HHHHHSCTTCTTHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHHHH
Confidence 99999997 23455544444443
No 2
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=56.98 E-value=44 Score=24.90 Aligned_cols=44 Identities=16% Similarity=0.306 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 004741 118 QIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSR 161 (732)
Q Consensus 118 ~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~ 161 (732)
++++|+++||..+..-.-++.+-+.+....-..+-....+||.+
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~KlKqRit~lE~~ 45 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQ 45 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45677777777777777777777776666666666666666654
No 3
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=56.78 E-value=78 Score=26.49 Aligned_cols=62 Identities=13% Similarity=0.128 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcc
Q 004741 104 LFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSV 165 (732)
Q Consensus 104 tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V 165 (732)
.+|..+.-..+..-+++.+++.|..+++.---.=...--++..-.+.--+.|.+||.|++..
T Consensus 10 ~LEr~~~~~~q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~~~ 71 (83)
T 2xdj_A 10 QLERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGG 71 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34444444445556677777777777765433322222233333444456788999999874
No 4
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=50.33 E-value=1.3e+02 Score=26.49 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhHHHHHHHHHHHhhhh
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKT---LAELEKGVDGLFDSFARLDSRI 162 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~---l~~L~~~~~~~~~~f~~Ld~~i 162 (732)
.-+.++..-+..|..-++.+..++.+||+.-...|+.++.. |..+..+++.+++.=-=|++-+
T Consensus 35 ~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El 100 (111)
T 2v66_B 35 KQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESEL 100 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888888888888899999999998888888777654 6666777777777665555544
No 5
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=49.80 E-value=2.1e+02 Score=28.47 Aligned_cols=166 Identities=15% Similarity=0.248 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCcchHHHHHHhhCCcchhhhhhhhhhhhhhcCCCCCC
Q 004741 257 AVANLQDYCNELENRLLSRFDAASQRRELSTMSECAKILSQFNRGTSAMQHYVATRPMFIDVEVMNADVRLVLGDQGSQA 336 (732)
Q Consensus 257 ~~~~Ie~~~e~fE~~LL~eF~~ay~~~D~~~M~~~A~iL~~fngG~s~I~~fV~k~~~Fid~~~~~~~~~~~l~~~~~~~ 336 (732)
...+|+.-...+...|.++.+. ..+....++...-|..+..|..+.+.|.+.|.-.|....-. + +- ..
T Consensus 66 l~~ki~eR~~~L~~~L~~~l~~---~~~~~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~-----l-~~---~g 133 (235)
T 2d2s_A 66 ISLKIEQRREAISSKLSQSILS---SNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQ-----I-GS---VD 133 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT---CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC-----C------CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHH-----h-cc---cC
Confidence 3456667777788888888855 55688999999999999999999999999876544332211 1 11 11
Q ss_pred CCCchhhhH-HHHHHHHHHHHHHHHhHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCcCcHHHHH
Q 004741 337 SPSNVARGL-ASLYKEITDTVRKEAATITAVFPS-PNYVMSILVQRVLEQRVTAILDKLLVKPSLVNLPPMEEGGLLLYL 414 (732)
Q Consensus 337 ~~~~~~~~L-~~~f~~I~~~v~~e~~iI~~VFp~-p~~Vm~~FvqrIf~q~I~~~i~~lL~~a~~~s~~~~~~~~~~~YL 414 (732)
.++.+...+ .-+|.-|..+++ .-..+||+ ....+..||.=..++ +..|+..+=..... + . ..|-
T Consensus 134 d~~~Yi~~Ls~i~Fs~I~~t~~----~f~~~F~~~~~~~~S~lV~Wa~~e-ve~f~~l~~rqv~~-~------~--~l~~ 199 (235)
T 2d2s_A 134 NPTNYLTQLAVIRFQTIKKTVE----DFQDIFKELGAKISSILVDWCSDE-VDNHFKLIDKQLLN-D------E--MLSP 199 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH----HHHHHSTTCCHHHHHHHHHHHHHH-HHHHHHHHHHHTTC------------CCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCCCcccccHHHHHHHHH-HHHHHHHHHHHccC-C------c--cHHH
Confidence 112222222 234555555544 44559998 456677777655443 22222221111100 0 1 1121
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHhhHhhhh
Q 004741 415 RMLAVAYEKTQELARDLRTVGCGDLDIEGVTECLFTSHKEE 455 (732)
Q Consensus 415 r~L~~lY~~t~~lv~~L~~~~~~~~~l~~l~~~lF~~yl~~ 455 (732)
..-..+..-++.|++.| .++.-+++.++.|+++.
T Consensus 200 ----ecv~i~~~~~~~L~~vG---Ld~~~~L~~ll~~~~~~ 233 (235)
T 2d2s_A 200 ----GSIKSSRKQIDGLKAVG---LDFVYKLDEFIKKNSDK 233 (235)
T ss_dssp ----HHHHHHHHHHHGGGGGT---CCCHHHHHHHHHTTGGG
T ss_pred ----HHHHHHHHHHHHHHHcC---CChHHHHHHHHhhhHhh
Confidence 33334555667788876 46888999999998874
No 6
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=48.94 E-value=1.4e+02 Score=31.87 Aligned_cols=180 Identities=12% Similarity=0.163 Sum_probs=89.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhh-hhhcccccccccc
Q 004741 95 FPEVDALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDS-RISSVGQTAAKIG 173 (732)
Q Consensus 95 ~~~~~~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~-~i~~V~~~~v~lG 173 (732)
+.++++....|..-++.|..--.++....+++ +++.+..|++...+|...+..+...|.-+.. .-..++....++|
T Consensus 183 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~---~~r~~~~~~~e~~~l~~~l~~l~~~~~~~~~~~~~~Ls~aL~~l~ 259 (386)
T 4akv_A 183 LQDVEDRVDTFKAFSKKMDDSVLQLSTVASEL---VRKHVGGFRKEFQKLGSAFQAISHSFQMDPPFCSEALNSAISHTG 259 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHTHHHHHHHHHHHHHHHHHHHTTSSGGGSCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHHH
Confidence 33444554555444444444433333333333 3444456777778888888888777754331 2345666777777
Q ss_pred cccccchhhhh--hHHHHHHHHHHHHHHhCCCCCccccCCCCCCchhhHHHHHHHHHHHhhchhhhcccCcccCCCCccc
Q 004741 174 DHLQSADAQRV--TASQTIDLIKYLMEFNSSPGDLMELSPLFSDDSRVAEAASIAEKLRSFAEEDIGRQGIQDMGNANAS 251 (732)
Q Consensus 174 dqLe~~~~~R~--ra~ea~~Li~~~~eF~~~~~~l~~ls~~f~dp~~~~eaA~ii~kL~~la~e~~~~~~~p~~~~~~~~ 251 (732)
+.++.+..--. ...+...|...+.+|... +...-++|.. . . ..+++.....+ .... ++..
T Consensus 260 ~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~l---l~s~Kdll~~---R-~--~aL~k~~ea~k-l~~~------~K~~-- 321 (386)
T 4akv_A 260 RTYEAIGEMFAEQPKNDLFQMLDTLSLYQGL---LSNFPDIIHL---Q-K--GAFAKVKESQR-MSDE------GRMV-- 321 (386)
T ss_dssp HHHHHHHHHHHHGGGTTHHHHHHHHHHHHHH---HHHHHHHHHH---H-H--HHHHHHHHHHH-HHHT------TSSC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH---H-H--HHHHHHHHHHH-HHHh------CCcc--
Confidence 77776653322 223334444444444321 1011112221 0 0 11111111110 0000 0000
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh--ccHH-HHHHHHHHHhhc
Q 004741 252 RGLEVAVANLQDYCNELENRLLSRFDAASQR--RELS-TMSECAKILSQF 298 (732)
Q Consensus 252 ~~~e~~~~~Ie~~~e~fE~~LL~eF~~ay~~--~D~~-~M~~~A~iL~~f 298 (732)
....+.+++-++.+=..+..|.++...+ .|+. .|.+++..-..|
T Consensus 322 ---~~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~ 368 (386)
T 4akv_A 322 ---QDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILF 368 (386)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1234566777788888888888876554 4665 777777766666
No 7
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=47.27 E-value=78 Score=23.73 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 106 KDSCRELIDLRKQIDDRLFNLKKELSVQDSK 136 (732)
Q Consensus 106 e~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~ 136 (732)
+.-|..|+....++-.|+..|+..|...|.+
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQE 33 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQE 33 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 4567889999999999999999999988844
No 8
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=47.06 E-value=26 Score=23.34 Aligned_cols=28 Identities=18% Similarity=0.402 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 104 LFKDSCRELIDLRKQIDDRLFNLKKELS 131 (732)
Q Consensus 104 tFe~~i~eL~~L~~~~~~k~~~Le~~v~ 131 (732)
..|..++.|+..-.++++|+.+||..|.
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~tvq 30 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEETVQ 30 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777777777778888888877664
No 9
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=44.14 E-value=41 Score=36.81 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=61.3
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhh
Q 004741 89 GLAAPLFPEVDALSSLFKDSCRELID-------LRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSR 161 (732)
Q Consensus 89 ~~~~~~~~~~~~li~tFe~~i~eL~~-------L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~ 161 (732)
+...|..|....+...+..++.++.. --++++++++++=.+. ..+.+-+.....|++++.++-..|.+++.+
T Consensus 341 ~~~~p~~p~~~~~~~~~~~~~~~vl~G~~t~eeal~~~~~~i~~~l~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (471)
T 3mq9_A 341 GEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTRITAARDGL-RAVMEARNVTHLLQQELTEAQKGFQDVEAQ 419 (471)
T ss_dssp SEECCCSTTHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCccHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhh-HHHHHhhhHHHHHHHHHHHHhhhHHHHHHH
Confidence 34456677666666666666554422 2223333333332222 234455677888999999999999999999
Q ss_pred hhcccccccccccccccchhh
Q 004741 162 ISSVGQTAAKIGDHLQSADAQ 182 (732)
Q Consensus 162 i~~V~~~~v~lGdqLe~~~~~ 182 (732)
-++...+||.|-+.||.--.+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~ 440 (471)
T 3mq9_A 420 AATANHTVMALMASLDAEKAQ 440 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcchhHHHHHHHHHHHHHH
Confidence 999999999998877754433
No 10
>2pft_A Exocytosis protein; helix-turn-helix, endocytosis-exocytosis complex; 2.25A {Mus musculus}
Probab=42.32 E-value=2.1e+02 Score=32.20 Aligned_cols=43 Identities=12% Similarity=0.295 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 004741 348 LYKEITDTVRKEAATITAVFPSPNYVMSILVQRVLEQRVTAILDKLLVK 396 (732)
Q Consensus 348 ~f~~I~~~v~~e~~iI~~VFp~p~~Vm~~FvqrIf~q~I~~~i~~lL~~ 396 (732)
.+.-+..++..|.++++.||+... -..+|....++-+..++..
T Consensus 203 ~~~~~~~l~~~Er~L~~~vf~~~~------~~~~F~~i~~~~~~~ll~f 245 (571)
T 2pft_A 203 CVSAFVKLAQSEYRLLMEIIPEHH------QKKTFDSLIQDALDGLMLE 245 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCccc------HHHHHHHHHHHHHHHHHHH
Confidence 344455679999999999998732 3457777777776666653
No 11
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=41.06 E-value=67 Score=26.32 Aligned_cols=47 Identities=11% Similarity=0.306 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 004741 118 QIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISS 164 (732)
Q Consensus 118 ~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~ 164 (732)
+++.|+++|+..+..-.-++.+-+.+....-..+-....+||.++..
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKP 50 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 35566666666666666666666666666555555655666655443
No 12
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=40.64 E-value=54 Score=28.48 Aligned_cols=56 Identities=13% Similarity=0.266 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 004741 107 DSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISS 164 (732)
Q Consensus 107 ~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~ 164 (732)
..+.+|..-++..+.|+.+|-..+ ...+....+.++.+.++.++.+|+.+...-..
T Consensus 43 el~~eL~~~c~~~qp~i~~li~~~--~dee~l~~lL~~ND~L~~vl~ry~~~~~~~~~ 98 (103)
T 1wrd_A 43 ELLQELNRTCRAMQQRVLELIPQI--ANEQLTEELLIVNDNLNNVFLRHERFERFRTG 98 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHhcCCCC
Confidence 577888888999999999998865 34447788999999999999999999765543
No 13
>3r2p_A Apolipoprotein A-I; amphipathic alpha-helix, major protein of high density lipop (HDL), lipid binding, plasma, lipid transport; 2.20A {Homo sapiens} PDB: 1gw3_A 1gw4_A
Probab=39.51 E-value=2.5e+02 Score=26.61 Aligned_cols=99 Identities=13% Similarity=0.216 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHhhhhhcccccccccccccc
Q 004741 100 ALSSLFKDSCRELI-DLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSF-ARLDSRISSVGQTAAKIGDHLQ 177 (732)
Q Consensus 100 ~li~tFe~~i~eL~-~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f-~~Ld~~i~~V~~~~v~lGdqLe 177 (732)
.+...+.....+|. .|.++++.=..+|+--+.+......+++.++..++.-..+.+ .++...+...-.+..++++.|.
T Consensus 71 e~~~~l~~~~~~Lr~~l~kdlee~r~~l~P~~~e~~~~~~~~~e~lr~~l~Py~~el~~~~~~~~e~Lr~~L~p~~e~lr 150 (185)
T 3r2p_A 71 EFWDNLEKETEGLRQEMSKDLEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMR 150 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 45555555544433 233444444444444445555556788888888888877766 4666677778888888888886
Q ss_pred cchhhhhhHHHHHHHHHHHHHH
Q 004741 178 SADAQRVTASQTIDLIKYLMEF 199 (732)
Q Consensus 178 ~~~~~R~ra~ea~~Li~~~~eF 199 (732)
.--.++--...+. |..|..++
T Consensus 151 ~~l~~~~e~lk~~-l~Py~ee~ 171 (185)
T 3r2p_A 151 DRARAHVDALRTH-LAPYSDEL 171 (185)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHH-hhhhHHHH
Confidence 4433333333222 34444444
No 14
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=35.40 E-value=51 Score=25.31 Aligned_cols=34 Identities=12% Similarity=0.139 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 103 SLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSK 136 (732)
Q Consensus 103 ~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~ 136 (732)
..=|.-+..|++...++-.|++.|+.+|.+.|.+
T Consensus 7 tRse~q~~kLKq~n~~L~~kv~~Le~~c~e~eQE 40 (58)
T 3a2a_A 7 TRSERQLLRLKQMNVQLAAKIQHLEFSCSEKEQE 40 (58)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346678889999999999999999999887754
No 15
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=31.94 E-value=2.6e+02 Score=24.37 Aligned_cols=61 Identities=5% Similarity=0.190 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHhhHHHHHHHHHHHhh
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQD---------SKHRKTLAELEKGVDGLFDSFARLDS 160 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E---------~~h~~~l~~L~~~~~~~~~~f~~Ld~ 160 (732)
.+-+..+..+.+...+...+..++..|+.++...+ +--...+..|.++|.+++..|+..+.
T Consensus 47 ~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~e~m~~y~~~q~ 116 (127)
T 1ez3_A 47 KTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQS 116 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888999999999999999988876543 22344467899999999999987554
No 16
>3p8c_D Wiskott-aldrich syndrome protein family member 1; actin polymerization, protein binding; 2.29A {Homo sapiens}
Probab=31.49 E-value=65 Score=33.15 Aligned_cols=65 Identities=22% Similarity=0.202 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcccccc
Q 004741 101 LSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTA 169 (732)
Q Consensus 101 li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V~~~~ 169 (732)
-.-+.-..+++|..|.+-..+=-..|..++.. ...++..|+.+++.+......||.....|+-..
T Consensus 30 ~n~tL~gilRQL~dLs~~A~dIF~eL~~e~~~----~~~R~~~L~~RI~~L~~~v~~ld~~~eevSLq~ 94 (279)
T 3p8c_D 30 TNISLANIIRQLSSLSKYAEDIFGELFNEAHS----FSFRVNSLQERVDRLSVSVTQLDPKEEELSLQD 94 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHTCCTTTCCCCTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhcccccccccccchhh
Confidence 35578899999999998888877777776654 356778888888888888888888776665433
No 17
>2bez_C E2 glycoprotein; coiled coil, membrane fusion, severe acute respiratory syndrome, viral protein; 1.6A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1zv8_A 1zvb_A
Probab=31.26 E-value=2.2e+02 Score=23.37 Aligned_cols=66 Identities=11% Similarity=0.182 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcc
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSV 165 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V 165 (732)
.+-..|-.++.....--.-+..-+.+...-|...-..-.+-+.+|...+..+..+++++-.|+..+
T Consensus 9 ~iA~sFN~A~~~i~~g~~tts~AL~kiQdVVN~q~~aL~~L~~qL~~NFgAISssi~dIy~RLd~l 74 (77)
T 2bez_C 9 QIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKV 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhh
Confidence 566789999999888888888888899999999999889999999999999999999888887654
No 18
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=30.98 E-value=1.8e+02 Score=32.36 Aligned_cols=21 Identities=19% Similarity=0.200 Sum_probs=8.2
Q ss_pred HHHHhhHHHHHHHHHHHhhhh
Q 004741 142 AELEKGVDGLFDSFARLDSRI 162 (732)
Q Consensus 142 ~~L~~~~~~~~~~f~~Ld~~i 162 (732)
.++.+.++.+..+.++|+..+
T Consensus 561 ~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 561 AELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 333333333333344443333
No 19
>2fji_1 Exocyst complex component SEC6; exocytosis, tandem helical bundles, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=29.79 E-value=5.2e+02 Score=27.32 Aligned_cols=231 Identities=6% Similarity=0.039 Sum_probs=111.4
Q ss_pred HhhhhhHHHHHHHHHHHHHHH----HHHHHHhhhhccccccccCCCCCccccCCCCccCHHHHHHHHHHHHHHHHHHHhh
Q 004741 451 SHKEEYPEHEQASLRQLYQAK----IEELRSESQQLSESSGTIGRSKGASVASSPQQISVTVVTEFVRWNEEALSRCTLF 526 (732)
Q Consensus 451 ~yl~~Yl~~E~~~L~~~~~~~----l~~~~~~~~~~~~~~~~~~r~~~a~l~~~~~~lS~eva~~il~~~keal~Rc~~l 526 (732)
..+++|++.....+++-+... ...|.++-.. | . ...++.+....+..+.+..++.++||...
T Consensus 11 ~L~~~Y~~~i~~~~~eW~~nil~~E~~~w~~r~~~-----P--------~-~d~~g~~~t~~~~dvfqml~eql~~a~~~ 76 (399)
T 2fji_1 11 TLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERSTP-----P--------H-SDSDGLLFLDGTKTCFQMFTQQVEVAAGT 76 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSC-----C--------E-ECTTSCEECHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----C--------C-cCCCCCeeCCchHHHHHHHHHHHHHHHhC
Confidence 345567777666555555444 4566532110 0 0 11345667778999999999999999987
Q ss_pred hcCchhHHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhh-hcCCchhHHHHHHHhhHHHHHhhcCCCchhh
Q 004741 527 SSQPAALAANV-RAVFTCLLDQVSQYITEGLERARDSLTEAAALRERF-VLGTSVSRRVAAAAASAAEAAAAAGESSFRS 604 (732)
Q Consensus 527 s~~~~~~~~~v-~~IF~~Ll~~lg~hi~~ale~al~~L~~~~~~~~~y-~~~~~~~r~~~~~~~~~~e~~~~~~ep~l~~ 604 (732)
+ .+++...| ...+..|......|.+.--+..-++++. + ..| ..+.+-.+ +. ...+.++.
T Consensus 77 ~--~~~l~~~v~~~~~~~L~~f~~~~~~~l~~~~~~~~~~--~--~~~~~~~~~~~~----------~~---~~~~~~~e 137 (399)
T 2fji_1 77 N--QAKILVGVVERFSDLLTKRQKNWISKISEEIKKQINY--N--HKYDIDPESITP----------ED---ECPGGLVE 137 (399)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H--HTTTTGGGSCCT----------TT---CCCSCHHH
T ss_pred C--CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--c--ccccccccccCc----------cc---cccccHHH
Confidence 6 35444444 3344444433322322221211112210 0 000 00000000 00 01112233
Q ss_pred H-HHhhhhhhHHHHHHHHHHHHHhhhhccCCCCC-C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 004741 605 F-MVAVQRCGSSVAIVQQYFANSISRLLLPVDGA-H-AASCEEMATAMSSAEAAAYKGLQQCIETVMAEVERLLSAEQKP 681 (732)
Q Consensus 605 F-~elV~~~d~I~~miq~~f~~ei~~~l~pl~~~-~-~~~~~~kk~~~~~lE~~v~~GL~~~I~~l~~~v~~iL~t~Qkk 681 (732)
+ ..++|.+......++.+-.+ +.+.... + ..|..+.......+.+-...|++..++.|+..++-.|..
T Consensus 138 ~liA~~Nn~~~~~e~~~~l~~~-----~~~~~~~~~~~~~~~~l~~~~~~f~~l~~~~~~~L~~~if~dl~p~~~~---- 208 (399)
T 2fji_1 138 YLIAVSNDQMKAADYAVAISSK-----YGKLVSKVYEKQITNHLEGTLDGFAEVAQCSSLGLITLMFDDLRKPYQE---- 208 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----HHTTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTHHHHTT----
T ss_pred hhhhhhccHHHHHHHHHHHHHH-----HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 3 44456665544444443322 2232221 1 122223333333444455556666666666666655541
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcccchhHHHHhhhc
Q 004741 682 SDYKSPDDGIAPDHRPTNACTRVVAYLSRVLEAAFTALEGLNKQAFLTEL 731 (732)
Q Consensus 682 tDF~P~~~~~~~~~~pT~aC~~vv~~L~~~~~~l~~sldg~nl~vfl~El 731 (732)
=|.++=. . ++ +...+|.-++.++.-.+..+...+.+.|..++
T Consensus 209 -lft~~W~----~-~~--~v~~i~~ti~dy~~d~~~~L~~~~~~~l~~~~ 250 (399)
T 2fji_1 209 -IFSKTWY----M-GS--QAQQIADTLDEYLLDIKPQMNSVLFVNFIDNV 250 (399)
T ss_dssp -TTSGGGT----T-CC--HHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHH
T ss_pred -hCCchhc----C-Cc--HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 1222111 1 11 77788888888888888888888888877664
No 20
>1wyy_A E2 glycoprotein; membrane fusion, severe acute respiratory syndrome, viral PR; 2.20A {Sars coronavirus} SCOP: h.3.3.1 PDB: 1wnc_A 2fxp_A
Probab=25.90 E-value=3.9e+02 Score=24.54 Aligned_cols=68 Identities=10% Similarity=0.172 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcccc
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQ 167 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V~~ 167 (732)
.+-..|-.++.....--.-+..-..+.+.-|...-..-.+-+.+|...+..+.++++++-.|+..+..
T Consensus 22 ~iA~sFN~A~~~~~~g~~tts~AL~kiQ~VVN~q~~aL~~l~~qL~~nFgAISssi~dIy~rLd~leA 89 (149)
T 1wyy_A 22 QIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEA 89 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 45678999998888888888888889999999999999999999999999999999999988876543
No 21
>2qyw_A Vesicle transport through interaction with T-SNAR homolog; HABC domain, protein transport, endocytosis; 2.00A {Mus musculus} PDB: 2v8s_V
Probab=25.22 E-value=1.6e+02 Score=25.42 Aligned_cols=66 Identities=8% Similarity=0.154 Sum_probs=50.9
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcc
Q 004741 98 VDALS--SLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSV 165 (732)
Q Consensus 98 ~~~li--~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V 165 (732)
+.|+- ..|++--.+...+..++..++.++.......+ -.+.+.+.+..++++-+-.+++|--++++
T Consensus 8 ~~~~~mSelFe~YE~df~~l~~~i~~kl~~i~~~~~~e~--rk~~i~~ie~~ldEA~eLl~qMelE~r~~ 75 (102)
T 2qyw_A 8 AASAASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEE--KKKLVRDFDEKQQEANETLAEMEEELRYA 75 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33444 89999999999999999999998743322222 24458888889999998888988888876
No 22
>1i6z_A BAG-family molecular chaperone regulator-1; triple helix bundle; NMR {Mus musculus} SCOP: a.7.7.1
Probab=25.16 E-value=3.1e+02 Score=24.98 Aligned_cols=29 Identities=31% Similarity=0.337 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
Q 004741 106 KDSCRELIDLRKQIDD---RLFNLKKELSVQD 134 (732)
Q Consensus 106 e~~i~eL~~L~~~~~~---k~~~Le~~v~~~E 134 (732)
+..++.|..+.+.++. +...++.++...|
T Consensus 17 e~~lKkL~dveksv~~~~k~l~~l~~el~~ie 48 (135)
T 1i6z_A 17 EVELKKLKDLEVSAEKIANHLQELNKELSGIQ 48 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666655 4444444443333
No 23
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=23.11 E-value=2.1e+02 Score=26.91 Aligned_cols=65 Identities=2% Similarity=0.172 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSK---------HRKTLAELEKGVDGLFDSFARLDSRISS 164 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~---------h~~~l~~L~~~~~~~~~~f~~Ld~~i~~ 164 (732)
.+-+..+..+.+...+...+..++..|+..+...+.. -......|.++|.+++..|+.+......
T Consensus 78 ~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~~~~~~~~~s~~~Rir~~q~~~L~~kf~~~m~~yq~~q~~y~~ 151 (180)
T 1s94_A 78 QMKEELEELMTDIKRTANKVRGKLKTIELNIEQEEHSNKSSADLRIRKTQYSTISRKFVEVMSDYNTTQIDYRD 151 (180)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777777777777777777777766543221 1223567788888888888877666553
No 24
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=22.52 E-value=2.5e+02 Score=26.38 Aligned_cols=64 Identities=11% Similarity=0.176 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISS 164 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~ 164 (732)
.+-+..+....+...+..++..++..|+..... .+........|...+.+++..|+.+......
T Consensus 46 ~~~~~i~~l~~~i~~~~~~~~~~lk~l~~~~~~-~r~~k~~~~~L~~~f~~~~~~fq~~Q~~~~~ 109 (196)
T 1fio_A 46 HLRHSLDNFVAQATDLQFKLKNEIKSAQRDGIH-DTNKQAQAENSRQRFLKLIQDYRIVDSNYKE 109 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577788888888888888888888888876532 2222233678899999999999887776543
No 25
>1hx1_B BAG-1, BAG-family molecular chaperone regulator-1; protein-protein complex, apoptosis, protein folding, molecul chaperone; 1.90A {Homo sapiens} SCOP: a.7.7.1 PDB: 3fzf_B* 3fzh_B* 3fzk_B* 3fzl_B* 3fzm_B* 3ldq_B* 3m3z_B*
Probab=22.48 E-value=60 Score=28.79 Aligned_cols=59 Identities=22% Similarity=0.332 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHhhhhhccccccccc
Q 004741 106 KDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGV---DGLFDSFARLDSRISSVGQTAAKI 172 (732)
Q Consensus 106 e~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~---~~~~~~f~~Ld~~i~~V~~~~v~l 172 (732)
|..++.|..+.+.++.-..+|+. +.+.+..++++| .-..+.+..||.||..++.-.+++
T Consensus 7 E~~lK~L~~veksv~~~~kkl~~--------~~~el~~iekGFL~kel~~eal~kldKrik~~~E~~MK~ 68 (114)
T 1hx1_B 7 EVELKKLKHLEKSVEKIADQLEE--------LNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMKI 68 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHSCSCHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHcccccHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666666655544444432 233344444443 112355566777776654444443
No 26
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=22.34 E-value=3.1e+02 Score=22.21 Aligned_cols=32 Identities=13% Similarity=0.280 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 97 EVDALSSLFKDSCRELIDLRKQIDDRLFNLKK 128 (732)
Q Consensus 97 ~~~~li~tFe~~i~eL~~L~~~~~~k~~~Le~ 128 (732)
+++..-..|..+-.+|...-..+...+..|..
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~ 44 (99)
T 3zbh_A 13 ELRGVARQYNVESSNVTELIARLDQMSHTLQG 44 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34456666666666666666666666666643
No 27
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=22.24 E-value=4.1e+02 Score=25.13 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 99 DALSSLFKDSCRELIDLRKQIDDRLFNLKKELS 131 (732)
Q Consensus 99 ~~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~ 131 (732)
..-+..+|...+||+.-....+.....|++++.
T Consensus 40 ~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~ 72 (168)
T 3o0z_A 40 SKSISQLESLNRELQERNRILENSKSQTDKDYY 72 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777777777777777776666666654
No 28
>2d9d_A BAG family molecular chaperone regulator 5; triple helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.99 E-value=1.1e+02 Score=25.50 Aligned_cols=72 Identities=10% Similarity=0.138 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhcccccccccccccccchh
Q 004741 102 SSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRKTLAELEKGVDGLFDSFARLDSRISSVGQTAAKIGDHLQSADA 181 (732)
Q Consensus 102 i~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V~~~~v~lGdqLe~~~~ 181 (732)
|+..|..+++...|+.++..-.+ +++.-..+...++.++.+.++++..=| .-+..
T Consensus 9 i~~Ie~v~~r~r~l~~ell~~~~------------~s~~yl~~k~eLq~Li~~LDev~~~~N-------------pcIRe 63 (89)
T 2d9d_A 9 ILKIEKVLKRMREIKNELLQAQN------------PSELYLSSKTELQGLIGQLDEVSLEKN-------------PCIRE 63 (89)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCSC------------TTTHHHHHHHHHHHHHHHHGGGCSCSS-------------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC------------chHHHhhhHHHHHHHHHHHhhcccCCC-------------hHHHH
Confidence 44556666666555554433221 133334555556666665555443222 22344
Q ss_pred hhhhH-HHHHHHHHHHHH
Q 004741 182 QRVTA-SQTIDLIKYLME 198 (732)
Q Consensus 182 ~R~ra-~ea~~Li~~~~e 198 (732)
-|.|| .|++.||.|+.-
T Consensus 64 aRRrAV~EvQ~lit~lDl 81 (89)
T 2d9d_A 64 ARRRAVIEVQTLITYIDL 81 (89)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 46666 599999999873
No 29
>2gd5_A Charged multivesicular BODY protein 3; CHMP3, ESCRT-III, protein transport; 2.80A {Homo sapiens} PDB: 3frv_A
Probab=21.63 E-value=3.5e+02 Score=25.41 Aligned_cols=68 Identities=15% Similarity=0.095 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHhhHHHHHHHHHHHhhhhhcccc
Q 004741 96 PEVDALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSK--------HRKTLAELEKGVDGLFDSFARLDSRISSVGQ 167 (732)
Q Consensus 96 ~~~~~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~--------h~~~l~~L~~~~~~~~~~f~~Ld~~i~~V~~ 167 (732)
|.++.-++....++++|.+-..+++....+++.++...-.+ |.+.+.+..+ ...+|..+..+|+.|+.
T Consensus 10 e~lr~~~~~L~~~~r~Ldr~~~kle~~ekk~~~~Ikka~k~g~~~~aki~Ak~lvr~rk----~~~~l~~~~a~l~~v~~ 85 (179)
T 2gd5_A 10 ELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRK----AVSKLYASKAHMNSVLM 85 (179)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 45567788888888888888888888888887777655433 4444544443 35556666666666654
No 30
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.59 E-value=3.1e+02 Score=23.44 Aligned_cols=76 Identities=13% Similarity=0.232 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HH-HHHHHHHHhhHHHHHHHHHHHhhhhhc
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDS--------------KH-RKTLAELEKGVDGLFDSFARLDSRISS 164 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~--------------~h-~~~l~~L~~~~~~~~~~f~~Ld~~i~~ 164 (732)
.-+......+.+|.....++..++..++..+...+. .| ...+......+..+...+..|..++..
T Consensus 10 ~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~~~g~~CPvCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~ 89 (112)
T 1l8d_A 10 TKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSE 89 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECTTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666777777777777777777666553 11 234555666666666666666666655
Q ss_pred ccccccccccc
Q 004741 165 VGQTAAKIGDH 175 (732)
Q Consensus 165 V~~~~v~lGdq 175 (732)
+-...-.+..+
T Consensus 90 l~~~~~~l~~~ 100 (112)
T 1l8d_A 90 LERELRRIDME 100 (112)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444333333
No 31
>2xhe_B Syntaxin1; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=21.56 E-value=3.7e+02 Score=27.03 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHH-HHHHHhhHHHHHHHHHHHhh
Q 004741 101 LSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQ-------------DSKHRKT-LAELEKGVDGLFDSFARLDS 160 (732)
Q Consensus 101 li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~-------------E~~h~~~-l~~L~~~~~~~~~~f~~Ld~ 160 (732)
+-+..+....+...+-..+..++..|+..+... +..++++ +..|..+|..++..|+.+..
T Consensus 86 ~~~~ie~l~~~i~~~~~~i~~~lk~l~~~~~~~~~~~~~~~~~~~~e~r~~k~~~~~L~~~f~~~~~~Fq~~Q~ 159 (279)
T 2xhe_B 86 LNEKLQDTMARISALGNKIRADLKQIEKENKRAQQEGTFEDGTVSTDLRIRQSQHSSLSRKFVKVMTRYNDVQA 159 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555666666666666666666554321 3344444 45666667777777765443
No 32
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=21.53 E-value=1.7e+02 Score=29.79 Aligned_cols=48 Identities=19% Similarity=0.421 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHhh-hhhccccccccccccc
Q 004741 129 ELSVQDSKHRKTLAELEK-------GVDGLFDSFARLDS-RISSVGQTAAKIGDHL 176 (732)
Q Consensus 129 ~v~~~E~~h~~~l~~L~~-------~~~~~~~~f~~Ld~-~i~~V~~~~v~lGdqL 176 (732)
++...+.+|...|..++. .+-.+++.|+.||. ||..+..........|
T Consensus 207 ~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~Q~lee~Rl~~lk~~l~~~~~~~ 262 (312)
T 3abh_A 207 DVLKTKEKYEKSLKELDQGTPQYMENMEQVFEQCQQFEEKRLRFFREVLLEVQKHL 262 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556555554433 24455666667763 5555444343333333
No 33
>3m0d_C TNF receptor-associated factor 1; trimeric helix coiled coiled, acetylation, alternative splic apoptosis, coiled coil, cytoplasm; 2.80A {Homo sapiens}
Probab=21.23 E-value=3e+02 Score=21.58 Aligned_cols=40 Identities=8% Similarity=0.059 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 100 ALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQDSKHRK 139 (732)
Q Consensus 100 ~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~E~~h~~ 139 (732)
.++..+|.-+..+..+-.-..+.++.+..+++....++..
T Consensus 6 ~~~~~le~kl~~lEnIv~~l~~eve~~~~~lea~~rq~~~ 45 (65)
T 3m0d_C 6 KLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQL 45 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhh
Confidence 5677777777777666666666677777666666655544
No 34
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=20.67 E-value=4.4e+02 Score=23.27 Aligned_cols=40 Identities=23% Similarity=0.314 Sum_probs=26.8
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 92 APLFPEVDALSSLFKDSCRELIDLRKQIDDRLFNLKKELSVQ 133 (732)
Q Consensus 92 ~~~~~~~~~li~tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~ 133 (732)
-|+|+. ||.--.|.-.++-..+.+.-+.+..+|..+|..+
T Consensus 30 ~~~~sD--PL~~ELeRLr~~~d~~~K~HE~kklqLkse~e~E 69 (115)
T 3vem_A 30 FPVFND--PFLHELEKLRRESENSKKTFEEKKSILKAELERK 69 (115)
T ss_dssp ---CCS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466664 8888877777777777777777777776665443
No 35
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=20.21 E-value=3.4e+02 Score=21.85 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 97 EVDALSSLFKDSCRELIDLRKQIDDRLFNLKK 128 (732)
Q Consensus 97 ~~~~li~tFe~~i~eL~~L~~~~~~k~~~Le~ 128 (732)
.++..-..|.....+|...-.++...+..|..
T Consensus 10 ~l~~~A~~~~~~~~~l~~~l~~L~~~~~~L~~ 41 (97)
T 2vs0_A 10 EIRAKSQSYGQGSDQIRQILSDLTRAQGEIAA 41 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44566677777777777777777777776654
No 36
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=20.08 E-value=2.6e+02 Score=22.74 Aligned_cols=30 Identities=7% Similarity=0.052 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004741 104 LFKDSCRELIDLRKQIDDRLFNLKKELSVQ 133 (732)
Q Consensus 104 tFe~~i~eL~~L~~~~~~k~~~Le~~v~~~ 133 (732)
..+.+-.++.....+++..+.+|...+...
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~v~~L 42 (99)
T 3zbh_A 13 ELRGVARQYNVESSNVTELIARLDQMSHTL 42 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666666666666666666654
Done!