Citrus Sinensis ID: 004746

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730--

MLVLVGTMPSLASLVSLGSISVTGTTSCCSESSCCSLVKRVSLTKRNFKGKKRWVCKYSVTTQTTTTTTDFIEQGNGSAVSFDSNTFRGRNSDNDSDGDDNGIVLKPAPRPVLKSLGVKGGASVSGVNSMGWDPSRVGEDSDEEERNKVIESLDEVLEKAEKLETRNESGNVSVNKATLPNVSADTKNGRPMNSVGAKKSKTLKSVWKKGDSVASIQKVVKETPKTKVKKEEPKMGGDMKMESQLNIPPRPVQPPLRPQPKLQTKPSVASTPVIKKPVVLKDVGAGQKLSTIGEADSAVKNKERKPILIDKFASKKPAVDPLISQAVLAPTKPGKGPAGKFKDDYRKKGGPRKRIVDDDDEIPDEEASELIPGAARKGRKWTKASRKAAKLKAAKDAAPVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKKDLFDEEDLDKLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKVRALFDDSGNRVDEAGPSIPVQV

cEEEEccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEcccHHHHHHHHcccccccccccccccccEEEEccccccccHHHHHHHHHcccccccccccccccccEEEEEccccccccEEEccccccHHHHHHHHcccccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHcccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHccccccccCEEEEEEccccccccEEEEEEEccccccccEEEEcccccEEEEEccccccccccccccccEEc

MLVL**TMPSLASL*SL****************CCSLVKRVSLTKRNFKGKKRWVCKYSV*************************************************************************************************************************************************************************************************************************************************************************************************************************************************APVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKK*********KLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKVRALFDDSGNRVDEAGPSIPVQV

xxxxxxxxxxxxxHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

MLVLVGTMPSLASLVSLGSISVTGTTSCCSESSCCSLVKRVSLTKRNFKGKKRWVCKYSVTTQTTTTTTDFIEQGNGSAVSFDSNTFRGRNSDNDSDGDDNGIVLKPAPRPVLKSLGVKGGASVSGVNSMGWDPSRVGEDSDEEExxxxxxxxxxxxxxxxxxxxxNESGNVSVNKATLPNVSADTKNGRPMNSVGAKKSKTLKSVWKKGDSVASIQKVVKETPKTKVKKEEPKMGGDMKMESQLNIPPRPVQPPLRPQPKLQTKPSVASTPVIKKPVVLKDVGAGQKLSTIGEADSAVKNKERKPILIDKFASKKPAVDPLISQAVLAPTKPGKGPAGKFKDDYRKKGGPRKRIVDDDDEIPDEEASELIPGAARKGRKWTKASRKAAKLKAAKDAAPVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKKDLFDEEDLDKLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKVRALFDDSGNRVDEAGPSIPVQV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Translation initiation factor IF-2, chloroplastic	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.	probable	Q9SHI1

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IZY, chain P
Confidence level:very confident
Coverage over the Query: 489-732
View the alignment between query and template
View the model in PyMOL

Template: 1XZP, chain A
Confidence level:very confident
Coverage over the Query: 412-655
View the alignment between query and template
View the model in PyMOL