BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004748
(732 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48626|ZW10_ARATH Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana
GN=ZW10 PE=2 SV=1
Length = 742
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/757 (62%), Positives = 591/757 (78%), Gaps = 47/757 (6%)
Query: 1 MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDF 60
++ LF++INVRDLL+ HDL D T PL+APDLRLLI+RLE HSL+IKSKVQSY+ +HH DF
Sbjct: 4 IDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHHSDF 63
Query: 61 ASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLEL 120
+ LFSLC DTVSRT IS D+SD+L L+S RPID E++ ++DE++ K KE ++K+E L+L
Sbjct: 64 SELFSLCQDTVSRTRLISDDVSDVLQLVSDRPIDVEIRSVVDEITEKTKEVKLKRESLDL 123
Query: 121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVC 180
V AIV I E L+ KEAL++GR RFAAE +RELK LR+G+E EP+ Y LLRKEW C
Sbjct: 124 VNAIVGICEALQETKEALKNGRFRFAAERIRELKVVLRIGEEEDGEPVAYALLRKEWSNC 183
Query: 181 FEE---------------------------LTVDGLDGIELRTVLEAMEVVGILDYGLAK 213
F+E L+V GI L TVLEAMEV+GILDYGLAK
Sbjct: 184 FDEIQEVLAKFMENAVRFELDSSRIRIKYQLSVGETAGIALSTVLEAMEVIGILDYGLAK 243
Query: 214 VADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGI 273
AD K+VI+PAV++ S VE+L +++EA LR+ S D K E+VDG +YSGI
Sbjct: 244 AADSIFKHVITPAVTHASTFAAVEDLCKSAGEVTEATLRLEQSSDHKFEDVDGDAMYSGI 303
Query: 274 IQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHT 333
++VVKFI +C N +W+ FGRLTWPRISELIIS FLSKVVPEDASKLADFQKII+ T
Sbjct: 304 LKVVKFICSSLCFGNVTWIHSFGRLTWPRISELIISKFLSKVVPEDASKLADFQKIIERT 363
Query: 334 SEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQE 393
S+FEAALKE+ F+S+SD ++RLS +AE+VEVHFASRKK EILAKARNLLLQC+F +PQ+
Sbjct: 364 SQFEAALKELNFVSSSD-AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQD 422
Query: 394 STGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAF 453
+A+ +++H+V LLF SERCVV++AASQLM LVH+ L+D+C+SS RVA
Sbjct: 423 ------------IAMRNAKHIVCLLFSSERCVVSEAASQLMNLVHKTLEDVCVSSARVAS 470
Query: 454 EFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSS 513
EFY+AARD+ILLYEA+VPVKLE+QL+G+N+ AVL+HNDCLYL +EILG AFEY + FPSS
Sbjct: 471 EFYNAARDSILLYEAVVPVKLEKQLDGLNEAAVLLHNDCLYLFEEILGLAFEYRASFPSS 530
Query: 514 IKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIE 573
IKE+AVFAD+APRF LMAEE+LQ+Q+ +VI +LREA+D ADGFQNTHQI+QF+SA+FSI+
Sbjct: 531 IKEYAVFADIAPRFKLMAEEVLQKQVHLVISSLREAIDSADGFQNTHQIKQFKSAEFSID 590
Query: 574 QVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIH 633
QVVF L+ VH+IWEP+L P TY +SMC VLESVF RI RDILLLDDMAA+ET +LQ+LI+
Sbjct: 591 QVVFSLKNVHMIWEPVLRPKTYKQSMCAVLESVFRRIARDILLLDDMAADETFELQKLIY 650
Query: 634 LMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWES 693
LML+NLSS+L+S+ + ++ +RPLDD+IPSL K RKLAELLDMPL SIT+AWES
Sbjct: 651 LMLKNLSSVLDSVRSADET-------SRPLDDIIPSLRKTRKLAELLDMPLMSITSAWES 703
Query: 694 GELLSCGFTLSEIEDFIKAIFADSTLRKECLWRIENV 730
GEL C FT +E++DFIKAIF DS LRKECLWRI+ V
Sbjct: 704 GELFRCNFTRTEVQDFIKAIFTDSPLRKECLWRIDEV 740
>sp|O54692|ZW10_MOUSE Centromere/kinetochore protein zw10 homolog OS=Mus musculus GN=Zw10
PE=2 SV=3
Length = 779
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 176/792 (22%), Positives = 342/792 (43%), Gaps = 108/792 (13%)
Query: 22 QTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDL 81
+ L DL ISRL +IK +V + I+ + +F V++ D +S D+
Sbjct: 11 HSGSLEKEDLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPTMQSAQALVTQVDTLSNDI 70
Query: 82 SDI-------------LGLISYRPIDKEVK---------EIIDEVSAKMKE---ARVKKE 116
+ + + + + ++++ + + E S+ ++E A +K+
Sbjct: 71 DQLKSRIETEVCRDLHISTVEFTNLKQQLERDSVVLTLLKQLQEFSSAIEEYNSALAEKK 130
Query: 117 LLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGL---- 172
+ R + E E LK +K R F + L+ L +L V +N ++Y L
Sbjct: 131 YIPAARHLEEAQECLKLLK-----SRKCFDLKMLKSLSMELTVQKQN----ILYHLGEDW 181
Query: 173 --------------------LRKEWLVCFEELTVDGLDGI-ELRTVLEAMEVVGILDYGL 211
L+ E +C E+ + + + + +VL A ++G L L
Sbjct: 182 QKLVVWKFPPAKDTSSLESCLQTELHLCTEQPEKEDMTPLPSISSVLLAFSILGELPTKL 241
Query: 212 AKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYS 271
+ +KY++ P V+ S L+ E+ ++ S+ +E+ ++
Sbjct: 242 KSFGQMLLKYILKPLVTCPS-------LHAVIERQPSSVSICFESLTTDLEHPSPPEAFA 294
Query: 272 GIIQVVKFIHKRICLQNGSWVRCFGRLT------------WPRISELIISNFLSKVVPED 319
I V++ + K++ G++ W +SE +I N L +P +
Sbjct: 295 KIRLVLEVLQKQLLDLPLDADLEIGKVPGIVLAEMLGEGIWEDLSECLIRNCLVYSIPTN 354
Query: 320 ASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKA 379
+SKL ++++II T EFE LKEM F+ D D L +A N+ HFA++K +++ A
Sbjct: 355 SSKLQEYEEIIQSTEEFEKFLKEMRFLKG-DTTD--LLKYARNINSHFANKKCQDVIVAA 411
Query: 380 RNLLLQ-----------CDFAVPQ-ESTGKD------PICK---NDGMAVDSSEHVVDLL 418
RNL+ C A+P S D +CK D ++ +
Sbjct: 412 RNLMTSEIHNTVKIGPDCKEALPDLPSPDADHKLQVQTVCKAQFTDAGNLEPETSLDPQS 471
Query: 419 FMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQL 478
F C +++A +LM+L +Q L + SS + A + +++ R+ L+ +VP + L
Sbjct: 472 FSLPTCRISEAVKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENL 531
Query: 479 EGINQVAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAEEILQR 537
+ Q+A + HN+C+Y++ +L ++ P F D+ P F + E
Sbjct: 532 RKLPQLAAIHHNNCMYIAHHLLTLGHQFRLRLAPILCDGTTTFVDLVPGFRRLGTECFLA 591
Query: 538 QIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNR 597
Q+Q L E L A F N + + +A ++ QV+ L ++ I+W+ +L + Y +
Sbjct: 592 QMQAQKGELLERLSSARSFANMDDEENYSAASKAVRQVLHQLRRLGIVWQDVLPVNIYCK 651
Query: 598 SMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEG 657
+M T+L + + + I L+D++ E+ +L L +++ + L+ N+ K +
Sbjct: 652 AMGTLLNTAIAEMMSRITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSDENKNKKYQE 711
Query: 658 DFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFAD 716
+ + +P F++L +L L+ I W G+ L+ F SE++ I+A+F +
Sbjct: 712 EVPVYVSKWMP----FKELMIMLQASLQEIGDRWADGKGPLATAFPSSEVKALIRALFQN 767
Query: 717 STLRKECLWRIE 728
+ R L +I+
Sbjct: 768 TERRAAALAKIK 779
>sp|Q5RFM4|ZW10_PONAB Centromere/kinetochore protein zw10 homolog OS=Pongo abelii GN=ZW10
PE=2 SV=3
Length = 779
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/570 (24%), Positives = 263/570 (46%), Gaps = 49/570 (8%)
Query: 194 LRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRM 253
+ +VL A V+G L L + +KY++ P S S L+ E ++
Sbjct: 224 ISSVLLAFSVLGELHSKLKSFGQMLLKYILRPLASCPS-------LHAVIESQPNIVIIR 276
Query: 254 VPSVDDKIENVDGKTIYSGIIQVVKFIHKRICL---------QNGSWV---RCFGRLTWP 301
S+ +E +++ I V++ + K++ + S V G + W
Sbjct: 277 FESIMTNLEYPSPSEVFTKIRLVLEVLQKQLLDLPLDTDLENEKTSTVPLAEMLGDMIWE 336
Query: 302 RISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAE 361
+SE +I N L +P ++SKL +++II T EFE ALKEM F+ D D L +A
Sbjct: 337 DLSEYLIKNCLVYSIPTNSSKLQQYEEIIQSTEEFENALKEMRFLKG-DTTD--LLKYAR 393
Query: 362 NVEVHFASRKKTEILAKARNLLLQ-----------CDFAVPQEST----GKDPICK---- 402
N+ HFA++K +++ ARNL+ VP+ T K + K
Sbjct: 394 NINSHFANKKCQDVIVAARNLMTSEIHNTVKIIPDSKINVPELPTPDEDNKLEVQKVSNT 453
Query: 403 --NDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAAR 460
N+ M ++ + F C ++++ +LM+L +Q L + SS + A + +++ R
Sbjct: 454 QYNEVMNLEPENTLDQHSFSLPTCRISESVKKLMELAYQTLLEATTSSDQCAVQLFYSVR 513
Query: 461 DAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHAV 519
+ L+ +VP + L+ + Q+A + HN+C+Y++ +L ++ P A
Sbjct: 514 NIFHLFHDVVPTYHKENLQKLPQLAAIHHNNCMYIAHHLLTLGHQFRLRLAPILCDGTAT 573
Query: 520 FADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFIL 579
F D+ P F + E Q++ L E L A F N + + +A ++ QV+ L
Sbjct: 574 FVDLVPGFRRLGTECFLAQMRAQKGELLERLSSARNFSNMDDEENYSAASKAVRQVLHQL 633
Query: 580 EKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENL 639
+++ I+W+ +L + Y ++M T+L + S + I L+D++ E+ +L L +++
Sbjct: 634 KRLGIVWQDVLPVNIYCKAMGTLLNTAISEVIGKITALEDISTEDGDRLYSLCKTVMDEG 693
Query: 640 SSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLS 698
+ L+ ++ K + + +P F++L +L L+ I W G+ L+
Sbjct: 694 PQVFAPLSEESKNKK----YQEEVPVYVPKWMPFKELMMMLQASLQEIGDRWADGKGPLA 749
Query: 699 CGFTLSEIEDFIKAIFADSTLRKECLWRIE 728
F+ SE++ I+A+F ++ R L +I+
Sbjct: 750 AAFSSSEVKALIRALFQNTERRAAALAKIK 779
>sp|Q4V8C2|ZW10_RAT Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus
GN=Zw10 PE=2 SV=3
Length = 777
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 180/791 (22%), Positives = 333/791 (42%), Gaps = 108/791 (13%)
Query: 22 QTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDL 81
+ L DL ISRL +IK +V + I+ + +F V++ D +S D+
Sbjct: 11 HSGSLEKEDLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPTMQSAQALVTQVDTLSNDI 70
Query: 82 SDILGLISYRPIDKEVKEIIDEVSAKMKEAR------VKKELLELVRAIVEIGERLKGVK 135
+ I ++ + K + R + K+L E AI E L K
Sbjct: 71 DQLKSRIETEVCRDLHISTVEFTNLKQRLERDSVVLNLLKQLQEFSSAIEEYNSAL-AEK 129
Query: 136 EALRDGRLRFAAEE---------------LRELKKDLRVGDENASEPLVYGL-------- 172
+ + RL A+E L+ L +L V +N ++Y L
Sbjct: 130 KYIPAARLLEEAQECLKLLKSKKCFDLKMLKSLSMELTVQKQN----ILYHLGEDWQKLV 185
Query: 173 ----------------LRKEWLVCFEELTVDGLDGIELRTVLEAMEVVGILDYGLAKVAD 216
L+ E +C E+ + + +VL A ++G L L
Sbjct: 186 VWKFPPSKDTSSLESCLQTELHLCTEQPEKEMTPLPSISSVLLAFSILGELPTKLKSFGQ 245
Query: 217 LKIKYVISPAVSYGSPITFVE-----------------ELNPGPEKMSEAILRMVPSVDD 259
+ +KY++ P V+ S +E E P PE A +++V V
Sbjct: 246 MLLKYILKPLVTCPSLHAVIERQPNSVSICFQSLATDSEHPPPPEAF--AKIQLVLEVLQ 303
Query: 260 KIENVDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPED 319
K I +V + + + G + W +S+ +I N L +P +
Sbjct: 304 KQLLDLPLDADLEIGKVPEIVLAEM----------LGEVIWEDLSDCLIRNCLVYSIPTN 353
Query: 320 ASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKA 379
+SKL +++II T EFE +LKEM F+ D D L +A N+ HFA++K +++ A
Sbjct: 354 SSKLQQYEEIIQSTEEFEKSLKEMRFLKG-DTTD--LLKYARNINSHFANKKCQDVIVAA 410
Query: 380 RNLLLQ-----------CDFAVPQ-ESTGKD-----PICK---NDGMAVDSSEHVVDLLF 419
R+L+ C+ +P S D +CK D ++ + F
Sbjct: 411 RHLMTSEIHNTVKIGPDCEETLPDLPSPDADHRLQVQVCKVQFTDAGNLEPETSLDPRSF 470
Query: 420 MSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLE 479
C +++A +LM+L +Q L + SS + A + +++ R+ L+ +VP + L+
Sbjct: 471 SLPTCRISEAVKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENLQ 530
Query: 480 GINQVAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAEEILQRQ 538
+ Q+A + HN+C+Y++ +L ++ S P F D+ P F + E Q
Sbjct: 531 KLPQLAAIHHNNCMYIAHHLLTLGHQFRSRLTPILCDGTTTFVDLVPGFRRLGTECFLAQ 590
Query: 539 IQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRS 598
++ L E L A F N + + +A ++ QV+ L+++ I+W+ +L + Y ++
Sbjct: 591 MRTQKGELLERLSSARSFANMDDEENYSAASKAVRQVLHQLKRLGIVWQDVLPVNIYCKA 650
Query: 599 MCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGD 658
M T+L +V + + I L+D++ E+ +L L +++ + L+ N+ K + +
Sbjct: 651 MGTLLNTVIAEMIGRITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSDENKNKKYQEE 710
Query: 659 FARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADS 717
+ +P F++L +L L+ I W G+ L+ F SE++ I+A+F ++
Sbjct: 711 VPVYVSKWMP----FKELMIMLQASLQEIGDRWADGKGPLATAFPSSEVKALIRALFQNT 766
Query: 718 TLRKECLWRIE 728
R L +I+
Sbjct: 767 ERRAAALAKIK 777
>sp|O43264|ZW10_HUMAN Centromere/kinetochore protein zw10 homolog OS=Homo sapiens GN=ZW10
PE=1 SV=3
Length = 779
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 266/571 (46%), Gaps = 51/571 (8%)
Query: 194 LRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRM 253
+ +VL A V+G L L + +KY++ P S S L+ E ++
Sbjct: 224 ISSVLLAFSVLGELHSKLKSFGQMLLKYILRPLASCPS-------LHAVIESQPNIVIIR 276
Query: 254 VPSVDDKIENVDGKTIYSGIIQVVKFIHKRICL---------QNGSWV---RCFGRLTWP 301
S+ +E +++ I V++ + K++ + S V G + W
Sbjct: 277 FESIMTNLEYPSPSEVFTKIRLVLEVLQKQLLDLPLDTDLENEKTSTVPLAEMLGDMIWE 336
Query: 302 RISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAE 361
+SE +I N L +P ++SKL +++II T EFE ALKEM F+ D D L +A
Sbjct: 337 DLSECLIKNCLVYSIPTNSSKLQQYEEIIQSTEEFENALKEMRFLKG-DTTD--LLKYAR 393
Query: 362 NVEVHFASRKKTEILAKARNLLLQ-----------CDFAVPQESTGKDPICKNDGMAVDS 410
N+ HFA++K +++ ARNL+ VP+ T D K + V +
Sbjct: 394 NINSHFANKKCQDVIVAARNLMTSEIHNTVKIIPDSKINVPELPT-PDEDNKLEVQKVSN 452
Query: 411 SEH--VVDL---------LFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAA 459
+++ V++L F C ++++ +LM+L +Q L + SS + A + +++
Sbjct: 453 TQYHEVMNLEPENTLDQHSFSLPTCRISESVKKLMELAYQTLLEATTSSDQCAVQLFYSV 512
Query: 460 RDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHA 518
R+ L+ +VP + L+ + Q+A + HN+C+Y++ +L ++ P A
Sbjct: 513 RNIFHLFHDVVPTYHKENLQKLPQLAAIHHNNCMYIAHHLLTLGHQFRLRLAPILCDGTA 572
Query: 519 VFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFI 578
F D+ P F + E Q++ L E L A F N + + +A ++ QV+
Sbjct: 573 TFVDLVPGFRRLGTECFLAQMRAQKGELLERLSSARNFSNMDDEENYSAASKAVRQVLHQ 632
Query: 579 LEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLEN 638
L+++ I+W+ +L + Y ++M T+L + S + I L+D++ E+ +L L +++
Sbjct: 633 LKRLGIVWQDVLPVNIYCKAMGTLLNTAISEVIGKITALEDISTEDGDRLYSLCKTVMDE 692
Query: 639 LSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LL 697
+ L+ ++ K + + +P F++L +L L+ I W G+ L
Sbjct: 693 GPQVFAPLSEESKNKK----YQEEVPVYVPKWMPFKELMMMLQASLQEIGDRWADGKGPL 748
Query: 698 SCGFTLSEIEDFIKAIFADSTLRKECLWRIE 728
+ F+ SE++ I+A+F ++ R L +I+
Sbjct: 749 AAAFSSSEVKALIRALFQNTERRAAALAKIK 779
>sp|O44218|ZW10_DROPS Centromere/kinetochore protein zw10 OS=Drosophila pseudoobscura
pseudoobscura GN=mit(1)15 PE=3 SV=2
Length = 718
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 48/430 (11%)
Query: 302 RISELIISNFLSKVVPEDASKLADFQ--KIIDHTSEFEAALKEMMFISASDNKDARLSNF 359
R+ L++++ L VPE + ++Q + + + FE L + I+ D LS F
Sbjct: 332 RMMHLLVNDCLIPAVPE---TMEEYQASTLCEDVAHFEQYLADSFLINPE--VDRGLSQF 386
Query: 360 AENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLF 419
E ++ +R + +L R ++ Q D Q+ P N M V + F
Sbjct: 387 IEQYGTYYRNRLCSRVLESTREII-QRDL---QDMVLVAP--NNQAMDVTGCDP-----F 435
Query: 420 MSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAIL-LYEAIVPVKLERQL 478
+ RC+V+++A MKL+ +IL+ + +L Y VP ++ L
Sbjct: 436 LFPRCMVSRSAQDFMKLMERILRQPTEKPGEDEADPLAGVIGMMLQTYIDEVPKVHKKLL 495
Query: 479 EGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQ 538
E I Q +VL HN+C+Y + + A + FP+ +K M H + Q
Sbjct: 496 ESIPQQSVLFHNNCMYFTHWVAQNANKGIESFPALVKTLQATGTM----HFRVQVTYQTS 551
Query: 539 IQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRS 598
I + ++ E+ + F++ H + + Q + LE + +W+ +L + YN +
Sbjct: 552 I---LMDIMESFE----FESPHTLGT--GPLKLVRQCLRQLELLKNVWQNVLPDNVYNST 602
Query: 599 MCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGD 658
+L + + + R I D++A L LI ++LE L V+Q
Sbjct: 603 FVELLHAFINELVRHIFTQRDISATMASDLSDLIDVVLEKAPKLFRDPHEVHQ------- 655
Query: 659 FARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADS 717
+ S K ++L +++ L+ IT W G L+ + EI I+A+F D+
Sbjct: 656 --------VRSWMKLQQLKTMMNASLKEITELWCKGAGPLTANYKADEIRYLIRALFQDT 707
Query: 718 TLRKECLWRI 727
R + + +I
Sbjct: 708 DRRAKAITQI 717
>sp|Q9W4X9|ZW10_DROME Centromere/kinetochore protein zw10 OS=Drosophila melanogaster
GN=mit(1)15 PE=1 SV=2
Length = 721
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 185/435 (42%), Gaps = 59/435 (13%)
Query: 302 RISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAE 361
++ +L++ L VPE + + + ++ E L + I+ +D L F E
Sbjct: 336 KMLKLLVDECLIPAVPESTEEYQT-STLCEDVAQLEQLLVDSFIINPE--QDRALGQFVE 392
Query: 362 NVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEH---VVDLL 418
E ++ +R +L AR ++ Q D D + V + H V +
Sbjct: 393 KYETYYRNRMYRRVLETAREII-QRDL--------------QDMVLVAPNNHSAEVANDP 437
Query: 419 FMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYH--AARDAILLYEAI--VPVKL 474
F+ RC+++K+A +KL+ +IL+ + ++ + A +I+L+ I VP
Sbjct: 438 FLFPRCMISKSAQDFVKLMDRILRQ---PTDKLGDQEADPIAGVISIMLHTYINEVPKVH 494
Query: 475 ERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEI 534
+ LE I Q AVL HN+C++ + + ++ + S+ A + H +
Sbjct: 495 RKLLESIPQQAVLFHNNCMFFTH----WVAQHANKGIESLAALAKTLQATGQQHFRVQVD 550
Query: 535 LQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFS-IEQVVFILEKVHIIWEPLLLPS 593
Q I + I E F++TH + S + Q + LE + +W +L +
Sbjct: 551 YQSSILMGIMQEFE-------FESTHTLG---SGPLKLVRQCLRQLELLKNVWANVLPET 600
Query: 594 TYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKG 653
YN + C ++ + + + R + L D++A+ +L LI ++L+ +L V Q
Sbjct: 601 VYNATFCELINTFVAELIRRVFTLRDISAQMACELSDLIDVVLQRAPTLFREPNEVVQ-- 658
Query: 654 KTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESG-ELLSCGFTLSEIEDFIKA 712
+ S K ++L +L+ L IT W G L+ + EI+ I+A
Sbjct: 659 -------------VLSWLKLQQLKAMLNASLMEITELWGDGVGPLTASYKSDEIKHLIRA 705
Query: 713 IFADSTLRKECLWRI 727
+F D+ R + + +I
Sbjct: 706 LFQDTDWRAKAITQI 720
>sp|O44219|ZW10_DROGR Centromere/kinetochore protein zw10 OS=Drosophila grimshawi
GN=mit(1)15 PE=3 SV=1
Length = 714
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 199/467 (42%), Gaps = 54/467 (11%)
Query: 270 YSGIIQVVKFIHKRICLQNGSW------VRCFGRLTWPRISELIISNFLSKVVPEDASKL 323
Y + + + + K +C N S G R+ +L++ L +V PE +
Sbjct: 292 YKDVFEHFRLLLKTLCGINSSLNGTQHVFTVIGDHVKERMLQLLLDECLIRV-PETMDEY 350
Query: 324 ADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLL 383
+ + + +EFE L + I+ D L+ F + + ++ +R +LA AR ++
Sbjct: 351 -NSSTLCEDVAEFEHQLVDTFLINPE--LDTTLTEFTKQFDTYYRNRLSERVLATAREII 407
Query: 384 LQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAAS-QLMKLVHQILQ 442
Q D Q+ T P + +A D LLF RC+V+K+A +KL+ ++++
Sbjct: 408 -QRDL---QDMTLVAPSNLSANVASDP------LLF--PRCMVSKSAQVDFVKLMERVVR 455
Query: 443 DICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGF 502
++ + Y VP ++ L+ I Q + L +N+C+YL+ +
Sbjct: 456 QPDKAAEGTPDPLGGVIGLLLDAYINEVPKVHKKLLKSIPQQSALFYNNCMYLTHWVAQH 515
Query: 503 AFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQI 562
+ FPS +K + + HL + Q I + I + E F+N H +
Sbjct: 516 TKDNIDGFPSLVK---ILQSTGNK-HLRVQVSYQESILMDIMSSFE-------FENPHTL 564
Query: 563 QQFESAKFS-IEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMA 621
+A + Q + LE + +W+ + + YN S C +L++ + + + + L D++
Sbjct: 565 G---TAPLRLVRQCLRQLELLKNVWQQVPAENVYNNSFCELLQAFINELVQRVFSLRDIS 621
Query: 622 AEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLD 681
A +L LI ++LE S L + D + S K ++L +++
Sbjct: 622 ATMASELSDLIDVVLEKASILFHD----------KNDVVH-----VRSWLKLQQLKIMMN 666
Query: 682 MPLRSITAAWESG-ELLSCGFTLSEIEDFIKAIFADSTLRKECLWRI 727
L+ + W G L+ + EI+ I+A+F D+ R + + +I
Sbjct: 667 ASLKEFSELWCDGVGPLTANYHADEIKHLIRALFQDTDRRAKAITQI 713
>sp|Q9CHN8|RSMA_LACLA Ribosomal RNA small subunit methyltransferase A OS=Lactococcus
lactis subsp. lactis (strain IL1403) GN=rsmA PE=3 SV=1
Length = 294
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 209 YGLAKVADLKIKYVISPAVSYGSPIT-FVEELNPGPEKMSEAILRMV----PSVDDKIEN 263
YG +A ++Y + +V++ P T F+ P P + AIL+MV P V+ + E
Sbjct: 175 YGSLSIA---VQYYMEASVAFIVPRTVFI----PAP-NVDSAILKMVRREAPLVEVEDEE 226
Query: 264 VDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKL 323
KT++S F+H+R L N FG+ + P I +L+ +S + +A +
Sbjct: 227 WFFKTMHSS------FVHRRKTLMNNLQA-AFGKESKPEIEKLLAQAEISPTIRGEALSI 279
Query: 324 ADFQKIID 331
+F K+ D
Sbjct: 280 EEFAKLAD 287
>sp|B8F9K1|LON_DESAA Lon protease OS=Desulfatibacillum alkenivorans (strain AK-01)
GN=lon PE=3 SV=1
Length = 826
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 102 DEVSAKMKEARVKKELLELVRAIVEIGERLKGVKE---ALRDGRLRFAAEE--LRELKKD 156
DE+S K+ +++++ + R + E+ E+ + +KE +R ++ A+E R+LK+
Sbjct: 236 DEISKSQKDYFLREQMRAINRELGEMDEKTQEIKEYQDKIRKAKMPKEAKEEAERQLKRL 295
Query: 157 LRVGDENASEPLVYGLLRKEWL--VCFEELTVDGLDGIELRTVLEAMEVVGILDYGLAKV 214
++ E P V L +WL V +++ T D LD + +A E++ YGL KV
Sbjct: 296 EQMHPEAGEAPTVRTYL--DWLVEVPWKKATKDTLD------IKKAKEILEEDHYGLEKV 347
Query: 215 ADLKIKYV----ISPAVSYGSPITFVEELNPGPEKMSEAILR 252
D ++Y+ ++P + G + FV G + ++I R
Sbjct: 348 KDRILEYLAVRKLNPKMK-GPILCFVGPPGVGKTSLGKSIAR 388
>sp|A4WH15|SYC_PYRAR Cysteine--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514
/ JCM 11321) GN=cysS PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 69 DTVSRTDEIS-----TDLSDILGLISYRPIDKEVKEIID---EVSAKMKEARVKKELLEL 120
D +SR +S ++DILG++ R + KEV+E + EV AK+++ R + +L +
Sbjct: 388 DKISRNTALSILSQYVKMADILGVLERREVPKEVEEAVKAAVEVRAKLRKER-QYQLADY 446
Query: 121 VRAIVEIGERLKGVKEALRD 140
+R ERL G+ L D
Sbjct: 447 IR------ERLAGIGVELHD 460
>sp|Q6YU51|DXS2_ORYSJ Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2
SV=1
Length = 713
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 146 AAEELRELKKDLRVGDENASEPLVYGLLRK-----EWLVCFEELTVDGLDGIELRTVLEA 200
AAE L+E + V D +PL GL+R+ E LV EE ++ G V
Sbjct: 598 AAEALKEHGIYVTVADARFCKPLDTGLIRELAAEHEVLVTVEEGSIGGFG----SHVAHY 653
Query: 201 MEVVGILDYGLAKVADLKIKYVISP--AVSYGSPITFVEELNPGPEKMSEAILRMV 254
+ + G+LD LK++ + P + +G+P+ +EE P ++ +L ++
Sbjct: 654 LSLSGLLD------GPLKLRSMFLPDRYIDHGAPVDQLEEAGLTPRHIAATVLSLL 703
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 175 KEWLVCFEELTVDGL--DGIELRTVLEAMEVVGILDYGLAKVADLKIKYVISPAVSYGS 231
+E L F+E+ GL DG+ L VL A G++D GL + ++ KY I P + + S
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
>sp|Q7UZI3|SYV_PROMP Valine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=valS PE=3 SV=1
Length = 918
Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 58 QDFASLFSLCNDTVSRTDEISTDLSDILGLISYRP-IDKEVKEIIDEVSAKMKEARVKKE 116
DF +L +L + ++++D+ + IS + IDK KEI+DE AK+KE ++ E
Sbjct: 849 NDFVNLEALKDRLTKDLKKVNSDIETLNKRISNKNFIDKAPKEIVDECFAKLKEGNLQSE 908
Query: 117 LL 118
++
Sbjct: 909 II 910
>sp|Q8ZYD8|SYC_PYRAE Cysteine--tRNA ligase OS=Pyrobaculum aerophilum (strain ATCC 51768
/ IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=cysS PE=3
SV=1
Length = 474
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 25/119 (21%)
Query: 43 LQIKSKVQSYIASHHQDFAS------LFSLCNDTVS----RTDEIS-----------TDL 81
L+ ++S+ A+ DF++ L+ L +S R D+ S +
Sbjct: 348 LEYGKYIESFYAALEDDFSTPQAAQQLYGLARYIISTVLHRIDKASRQTAIDVLTQYVKM 407
Query: 82 SDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRD 140
+DILG++ R I KEV+E+I V EAR + ++ + + ERL G+ L D
Sbjct: 408 ADILGVLERREIPKEVEEVIKAVV----EARARLRREKMYQLADYLRERLAGIGVELHD 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 251,913,718
Number of Sequences: 539616
Number of extensions: 10319516
Number of successful extensions: 32222
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 32127
Number of HSP's gapped (non-prelim): 73
length of query: 732
length of database: 191,569,459
effective HSP length: 125
effective length of query: 607
effective length of database: 124,117,459
effective search space: 75339297613
effective search space used: 75339297613
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)