Query 004750
Match_columns 732
No_of_seqs 313 out of 1663
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 12:17:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004750.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004750hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 1.6E-42 3.5E-47 389.3 46.3 447 3-722 8-472 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-38 3.8E-43 359.1 45.5 442 3-717 13-501 (502)
3 KOG0254 Predicted transporter 100.0 1.5E-38 3.2E-43 361.6 41.6 447 4-724 43-503 (513)
4 PRK10077 xylE D-xylose transpo 100.0 2.3E-37 5E-42 344.3 47.2 436 4-724 10-477 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 2.2E-37 4.8E-42 365.3 49.1 208 2-212 163-381 (742)
6 TIGR00879 SP MFS transporter, 100.0 4.7E-35 1E-39 318.9 40.3 442 3-714 25-480 (481)
7 PF00083 Sugar_tr: Sugar (and 100.0 1.6E-42 3.5E-47 383.2 -21.1 434 9-719 3-451 (451)
8 PRK10642 proline/glycine betai 100.0 1.9E-32 4.1E-37 309.3 46.0 187 5-192 15-219 (490)
9 PRK11551 putative 3-hydroxyphe 100.0 2.4E-31 5.1E-36 290.0 43.7 186 2-191 11-196 (406)
10 TIGR00898 2A0119 cation transp 100.0 5.8E-33 1.3E-37 312.2 31.8 176 27-210 110-288 (505)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8E-32 1.7E-36 297.9 39.1 185 4-190 6-194 (412)
12 PRK11663 regulatory protein Uh 100.0 4.3E-31 9.4E-36 293.4 41.4 183 4-190 21-203 (434)
13 PRK09556 uhpT sugar phosphate 100.0 1.1E-31 2.3E-36 301.0 36.2 185 4-190 27-217 (467)
14 PRK12307 putative sialic acid 100.0 2E-30 4.3E-35 284.4 42.0 168 3-174 15-182 (426)
15 KOG0253 Synaptic vesicle trans 100.0 1.9E-31 4.1E-36 284.9 31.6 442 2-712 74-527 (528)
16 PRK10406 alpha-ketoglutarate t 100.0 6.4E-30 1.4E-34 283.6 45.1 187 3-190 19-223 (432)
17 TIGR00893 2A0114 d-galactonate 100.0 1.6E-30 3.4E-35 275.3 37.3 171 15-189 3-173 (399)
18 TIGR00891 2A0112 putative sial 100.0 7E-30 1.5E-34 274.7 42.8 187 2-191 8-194 (405)
19 COG2271 UhpC Sugar phosphate p 100.0 6.3E-31 1.4E-35 286.9 31.8 406 2-705 25-435 (448)
20 PRK14995 methyl viologen resis 100.0 8.1E-29 1.8E-33 280.4 47.9 185 1-189 1-186 (495)
21 PRK03545 putative arabinose tr 100.0 6.5E-29 1.4E-33 270.8 45.1 182 3-188 6-187 (390)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 1E-29 2.2E-34 269.3 37.3 178 5-188 3-180 (377)
23 PRK09952 shikimate transporter 100.0 3.9E-29 8.4E-34 278.6 42.7 185 3-191 19-225 (438)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 6E-29 1.3E-33 277.7 42.4 184 3-190 26-213 (452)
25 TIGR00903 2A0129 major facilit 100.0 8.6E-29 1.9E-33 271.2 40.7 168 19-191 4-171 (368)
26 PRK03893 putative sialic acid 100.0 2.4E-28 5.1E-33 273.6 43.6 184 3-191 17-200 (496)
27 PRK09705 cynX putative cyanate 100.0 3.2E-28 6.9E-33 267.1 42.6 166 5-176 9-175 (393)
28 COG2814 AraJ Arabinose efflux 100.0 3.9E-28 8.5E-33 266.6 42.9 181 2-186 9-189 (394)
29 KOG0252 Inorganic phosphate tr 100.0 7.4E-31 1.6E-35 287.6 21.0 447 2-722 37-515 (538)
30 TIGR00895 2A0115 benzoate tran 100.0 1.2E-28 2.6E-33 263.5 37.6 187 3-193 14-200 (398)
31 PRK15075 citrate-proton sympor 100.0 9.7E-28 2.1E-32 266.3 42.4 167 4-172 13-199 (434)
32 TIGR00712 glpT glycerol-3-phos 100.0 5E-28 1.1E-32 269.0 35.9 183 4-190 25-211 (438)
33 PRK10091 MFS transport protein 100.0 5.3E-27 1.2E-31 255.7 42.5 177 8-188 5-181 (382)
34 TIGR00711 efflux_EmrB drug res 100.0 4.7E-27 1E-31 261.3 40.8 180 6-189 2-181 (485)
35 TIGR00881 2A0104 phosphoglycer 100.0 1.9E-28 4.2E-33 259.7 28.2 174 13-189 2-175 (379)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 7.8E-28 1.7E-32 268.6 33.0 185 2-190 15-224 (465)
37 PRK10213 nepI ribonucleoside t 100.0 5.6E-26 1.2E-30 249.9 45.6 183 2-188 16-198 (394)
38 PRK15402 multidrug efflux syst 100.0 4.3E-26 9.3E-31 249.6 44.4 184 2-189 9-192 (406)
39 PRK05122 major facilitator sup 100.0 2.6E-26 5.6E-31 250.2 41.2 168 5-176 14-190 (399)
40 PRK10504 putative transporter; 100.0 1.7E-25 3.7E-30 249.6 47.9 178 7-188 11-188 (471)
41 PRK03699 putative transporter; 100.0 2.3E-26 5E-31 251.7 40.1 175 3-180 4-178 (394)
42 PRK10489 enterobactin exporter 100.0 2.1E-26 4.6E-31 253.3 39.0 384 12-717 23-412 (417)
43 TIGR00710 efflux_Bcr_CflA drug 100.0 9.9E-26 2.2E-30 241.8 43.1 179 7-189 6-184 (385)
44 TIGR00900 2A0121 H+ Antiporter 100.0 7.4E-26 1.6E-30 239.2 40.4 166 11-180 4-174 (365)
45 PLN00028 nitrate transmembrane 100.0 4.2E-26 9E-31 257.5 40.5 182 5-189 35-223 (476)
46 PRK12382 putative transporter; 100.0 1E-25 2.2E-30 245.2 41.9 165 7-175 16-189 (392)
47 TIGR00899 2A0120 sugar efflux 100.0 1.3E-25 2.8E-30 240.5 40.8 173 13-189 4-180 (375)
48 KOG0255 Synaptic vesicle trans 100.0 2.3E-26 4.9E-31 261.2 36.7 165 41-211 116-280 (521)
49 PRK03633 putative MFS family t 100.0 2.7E-25 5.8E-30 242.0 43.4 149 1-151 1-149 (381)
50 PRK09874 drug efflux system pr 100.0 3.4E-25 7.4E-30 240.7 42.4 175 9-188 17-196 (408)
51 TIGR00892 2A0113 monocarboxyla 100.0 3.2E-26 7E-31 256.8 35.2 179 3-186 16-195 (455)
52 TIGR00897 2A0118 polyol permea 100.0 5.6E-25 1.2E-29 241.7 43.8 177 7-187 14-195 (402)
53 cd06174 MFS The Major Facilita 100.0 2E-25 4.3E-30 233.4 38.3 346 10-701 3-349 (352)
54 TIGR00883 2A0106 metabolite-pr 100.0 8.7E-26 1.9E-30 240.7 34.6 174 15-189 2-194 (394)
55 PF07690 MFS_1: Major Facilita 100.0 6.6E-26 1.4E-30 238.8 32.5 174 12-189 2-176 (352)
56 PRK15034 nitrate/nitrite trans 100.0 1.4E-24 3E-29 244.6 43.7 181 5-188 33-235 (462)
57 PRK10473 multidrug efflux syst 100.0 2.7E-24 5.8E-29 234.1 44.1 173 12-188 9-181 (392)
58 PRK11102 bicyclomycin/multidru 99.9 4.2E-24 9.1E-29 230.0 40.8 165 20-188 5-169 (377)
59 PRK15403 multidrug efflux syst 99.9 1.7E-23 3.7E-28 231.8 46.0 180 6-189 16-195 (413)
60 PRK11043 putative transporter; 99.9 2.4E-23 5.3E-28 227.3 45.2 176 8-188 8-183 (401)
61 PRK15011 sugar efflux transpor 99.9 1.7E-23 3.7E-28 229.3 42.2 177 8-189 17-198 (393)
62 PRK11010 ampG muropeptide tran 99.9 3.3E-23 7.2E-28 235.2 44.1 175 8-189 14-198 (491)
63 PRK10054 putative transporter; 99.9 1.9E-23 4.1E-28 230.0 40.2 172 12-188 13-185 (395)
64 PRK11652 emrD multidrug resist 99.9 1.1E-22 2.3E-27 221.8 43.5 183 3-189 5-187 (394)
65 PRK11646 multidrug resistance 99.9 1.2E-22 2.7E-27 223.9 43.0 171 12-187 16-187 (400)
66 PRK10133 L-fucose transporter; 99.9 1.3E-22 2.8E-27 227.1 43.4 147 4-152 24-173 (438)
67 PRK11195 lysophospholipid tran 99.9 2E-22 4.3E-27 221.8 42.5 171 10-189 7-177 (393)
68 TIGR00885 fucP L-fucose:H+ sym 99.9 1.6E-22 3.4E-27 224.6 41.5 171 8-180 5-202 (410)
69 COG2223 NarK Nitrate/nitrite t 99.9 1.1E-23 2.4E-28 230.5 31.5 384 3-704 11-401 (417)
70 TIGR00886 2A0108 nitrite extru 99.9 2.9E-23 6.3E-28 221.9 32.8 177 10-189 5-192 (366)
71 KOG1330 Sugar transporter/spin 99.9 1.4E-25 3.1E-30 247.1 15.3 185 1-189 28-213 (493)
72 KOG2532 Permease of the major 99.9 4E-23 8.6E-28 233.4 33.7 152 35-190 67-221 (466)
73 PRK11902 ampG muropeptide tran 99.9 1.3E-21 2.8E-26 214.9 44.3 172 11-189 4-185 (402)
74 PRK08633 2-acyl-glycerophospho 99.9 2.4E-22 5.2E-27 247.2 41.9 168 23-190 27-204 (1146)
75 TIGR00896 CynX cyanate transpo 99.9 3E-22 6.5E-27 215.2 36.6 150 23-176 17-166 (355)
76 TIGR00902 2A0127 phenyl propri 99.9 2.1E-21 4.7E-26 211.9 41.2 157 11-173 9-167 (382)
77 TIGR00889 2A0110 nucleoside tr 99.9 4E-21 8.7E-26 213.6 40.6 175 529-710 227-408 (418)
78 KOG2533 Permease of the major 99.9 1E-22 2.2E-27 231.3 26.8 185 4-190 43-232 (495)
79 PRK09528 lacY galactoside perm 99.9 2.8E-21 6E-26 213.2 37.4 141 557-706 264-405 (420)
80 KOG2504 Monocarboxylate transp 99.9 1.6E-22 3.5E-27 230.8 27.6 182 3-189 43-225 (509)
81 PTZ00207 hypothetical protein; 99.9 6.7E-21 1.4E-25 220.3 40.2 195 3-205 25-227 (591)
82 PRK11128 putative 3-phenylprop 99.9 1.8E-20 3.9E-25 204.5 40.9 154 15-176 13-170 (382)
83 TIGR00792 gph sugar (Glycoside 99.9 2.8E-21 6.1E-26 212.5 34.3 173 14-188 7-197 (437)
84 PRK06814 acylglycerophosphoeth 99.9 5.5E-21 1.2E-25 236.1 40.4 178 7-188 16-197 (1140)
85 TIGR00882 2A0105 oligosacchari 99.9 1.4E-20 3.1E-25 205.7 38.7 172 10-188 6-186 (396)
86 TIGR00901 2A0125 AmpG-related 99.9 2.4E-20 5.2E-25 200.3 34.2 161 22-188 4-181 (356)
87 TIGR02718 sider_RhtX_FptX side 99.9 3.6E-19 7.8E-24 194.3 41.7 175 8-186 3-185 (390)
88 TIGR00805 oat sodium-independe 99.9 1.1E-20 2.3E-25 221.4 27.4 179 7-188 34-283 (633)
89 TIGR00924 yjdL_sub1_fam amino 99.9 8.1E-19 1.8E-23 198.7 41.3 165 9-177 13-184 (475)
90 PF06609 TRI12: Fungal trichot 99.9 1.2E-18 2.6E-23 201.2 43.0 172 10-187 48-220 (599)
91 PF05977 MFS_3: Transmembrane 99.9 2.9E-18 6.3E-23 196.8 42.4 164 10-177 14-182 (524)
92 PRK10207 dipeptide/tripeptide 99.9 1.8E-18 3.9E-23 196.9 38.5 174 8-186 16-194 (489)
93 TIGR00806 rfc RFC reduced fola 99.9 8.3E-19 1.8E-23 196.7 33.1 163 21-189 41-206 (511)
94 COG0738 FucP Fucose permease [ 99.8 2E-17 4.4E-22 180.7 36.7 170 7-178 14-203 (422)
95 PRK09584 tppB putative tripept 99.8 5E-17 1.1E-21 185.4 40.1 162 11-176 26-192 (500)
96 TIGR01301 GPH_sucrose GPH fami 99.8 6.8E-17 1.5E-21 183.4 40.3 172 16-189 14-222 (477)
97 COG2807 CynX Cyanate permease 99.8 3.8E-17 8.3E-22 176.4 36.3 165 9-179 15-180 (395)
98 PRK09669 putative symporter Ya 99.8 1.1E-16 2.3E-21 178.6 35.7 174 12-187 15-206 (444)
99 PRK10429 melibiose:sodium symp 99.8 1.6E-16 3.6E-21 179.2 36.5 178 9-188 9-204 (473)
100 TIGR00788 fbt folate/biopterin 99.8 6.9E-17 1.5E-21 182.8 29.5 175 6-188 26-211 (468)
101 PF11700 ATG22: Vacuole efflux 99.8 6.8E-15 1.5E-19 167.3 43.9 177 524-711 295-474 (477)
102 KOG3764 Vesicular amine transp 99.8 1.6E-18 3.6E-23 188.3 13.8 146 41-188 104-250 (464)
103 PF03825 Nuc_H_symport: Nucleo 99.8 4.8E-15 1E-19 165.1 41.4 171 14-189 10-183 (400)
104 KOG2615 Permease of the major 99.8 5.1E-17 1.1E-21 176.0 22.4 114 41-157 66-179 (451)
105 PRK09848 glucuronide transport 99.7 6.5E-15 1.4E-19 164.4 36.2 130 12-143 14-157 (448)
106 PF13347 MFS_2: MFS/sugar tran 99.7 1.4E-15 2.9E-20 169.0 29.8 159 27-187 23-200 (428)
107 PRK11462 putative transporter; 99.7 2.8E-14 6.1E-19 161.1 38.1 174 12-187 15-206 (460)
108 PRK15462 dipeptide/tripeptide 99.7 6.1E-14 1.3E-18 160.0 40.0 157 16-176 19-180 (493)
109 PF01306 LacY_symp: LacY proto 99.6 2E-13 4.3E-18 152.0 31.9 146 555-709 259-405 (412)
110 KOG2563 Permease of the major 99.6 5.1E-14 1.1E-18 155.9 24.0 186 2-190 41-240 (480)
111 COG2211 MelB Na+/melibiose sym 99.6 4.2E-12 9.1E-17 143.1 35.9 177 10-188 16-210 (467)
112 COG2270 Permeases of the major 99.6 1.1E-12 2.3E-17 144.8 28.8 169 524-711 266-435 (438)
113 PRK10642 proline/glycine betai 99.6 3.5E-13 7.7E-18 152.7 24.7 185 20-209 264-458 (490)
114 TIGR01272 gluP glucose/galacto 99.5 2.9E-12 6.2E-17 137.7 28.4 153 518-689 148-300 (310)
115 KOG4686 Predicted sugar transp 99.5 1.9E-14 4.2E-19 150.7 10.6 143 4-148 42-188 (459)
116 TIGR00880 2_A_01_02 Multidrug 99.5 3.1E-13 6.8E-18 122.8 13.3 138 49-188 4-141 (141)
117 KOG2325 Predicted transporter/ 99.5 6.3E-13 1.4E-17 150.1 17.3 187 2-189 30-233 (488)
118 KOG3626 Organic anion transpor 99.5 5.3E-12 1.1E-16 147.9 24.1 180 6-188 97-345 (735)
119 TIGR00889 2A0110 nucleoside tr 99.4 3.8E-11 8.2E-16 133.9 21.8 162 25-188 227-405 (418)
120 PF03137 OATP: Organic Anion T 99.4 5.3E-14 1.1E-18 162.3 -1.6 144 9-154 6-199 (539)
121 PRK09528 lacY galactoside perm 99.4 2.4E-11 5.3E-16 134.3 19.3 147 41-189 260-407 (420)
122 COG3104 PTR2 Dipeptide/tripept 99.4 8.7E-10 1.9E-14 124.2 31.4 148 28-179 44-200 (498)
123 cd06174 MFS The Major Facilita 99.3 7.6E-11 1.6E-15 123.4 21.1 166 12-181 181-348 (352)
124 TIGR01299 synapt_SV2 synaptic 99.3 1.1E-10 2.4E-15 139.2 24.6 160 528-707 185-357 (742)
125 TIGR00890 2A0111 Oxalate/Forma 99.3 5.3E-11 1.2E-15 126.3 18.8 151 23-177 222-374 (377)
126 TIGR00710 efflux_Bcr_CflA drug 99.3 1.1E-10 2.4E-15 125.5 20.3 170 522-710 17-186 (385)
127 PRK11663 regulatory protein Uh 99.3 1E-10 2.2E-15 130.5 20.7 181 508-707 21-201 (434)
128 TIGR00895 2A0115 benzoate tran 99.3 3.6E-11 7.9E-16 128.8 16.1 166 525-709 32-197 (398)
129 PRK05122 major facilitator sup 99.3 3.6E-10 7.7E-15 123.5 22.8 159 24-188 234-392 (399)
130 PRK15011 sugar efflux transpor 99.3 4.4E-10 9.6E-15 123.5 23.3 155 27-187 237-392 (393)
131 PRK03545 putative arabinose tr 99.3 3E-10 6.5E-15 124.3 21.4 159 531-708 30-188 (390)
132 TIGR00879 SP MFS transporter, 99.3 1.1E-10 2.5E-15 127.4 18.2 179 7-189 285-474 (481)
133 PRK10473 multidrug efflux syst 99.3 2.1E-10 4.6E-15 125.1 20.1 182 510-710 3-184 (392)
134 PF03209 PUCC: PUCC protein; 99.3 3.4E-08 7.4E-13 109.5 36.9 118 32-152 6-145 (403)
135 PRK12382 putative transporter; 99.3 3.9E-10 8.5E-15 123.1 21.6 158 22-185 232-389 (392)
136 TIGR00711 efflux_EmrB drug res 99.3 8.2E-11 1.8E-15 131.3 16.3 179 513-710 5-183 (485)
137 PRK10213 nepI ribonucleoside t 99.3 5.4E-10 1.2E-14 123.4 22.2 158 532-708 42-199 (394)
138 TIGR00893 2A0114 d-galactonate 99.2 1.6E-10 3.5E-15 122.6 16.8 164 527-709 11-174 (399)
139 PRK09874 drug efflux system pr 99.2 4.6E-10 9.9E-15 122.3 20.5 162 23-186 236-399 (408)
140 PRK10054 putative transporter; 99.2 4.4E-10 9.5E-15 124.1 20.6 168 522-708 19-186 (395)
141 PRK11551 putative 3-hydroxyphe 99.2 7.3E-10 1.6E-14 121.2 22.1 154 25-182 239-393 (406)
142 TIGR02332 HpaX 4-hydroxyphenyl 99.2 3.6E-10 7.8E-15 125.5 19.8 182 509-709 7-194 (412)
143 KOG2816 Predicted transporter 99.2 4E-09 8.7E-14 119.9 28.5 176 5-188 21-202 (463)
144 PRK09556 uhpT sugar phosphate 99.2 6.4E-10 1.4E-14 125.3 21.9 168 10-181 262-445 (467)
145 PRK10077 xylE D-xylose transpo 99.2 9E-10 2E-14 123.1 22.6 163 25-189 290-461 (479)
146 PRK14995 methyl viologen resis 99.2 5.2E-10 1.1E-14 127.3 20.8 181 510-709 6-187 (495)
147 PRK10504 putative transporter; 99.2 7.6E-10 1.7E-14 123.9 20.7 175 515-708 15-189 (471)
148 TIGR00899 2A0120 sugar efflux 99.2 1.7E-09 3.7E-14 116.1 22.4 150 31-186 225-374 (375)
149 TIGR00891 2A0112 putative sial 99.2 1E-09 2.2E-14 118.4 20.8 180 510-709 12-193 (405)
150 PLN00028 nitrate transmembrane 99.2 1.6E-09 3.4E-14 122.9 23.3 180 506-706 33-221 (476)
151 PRK03893 putative sialic acid 99.2 9.9E-10 2.1E-14 123.5 20.7 194 494-708 5-198 (496)
152 TIGR00881 2A0104 phosphoglycer 99.2 2E-10 4.3E-15 122.0 13.9 164 526-708 11-175 (379)
153 PRK10489 enterobactin exporter 99.2 1.4E-09 2.9E-14 120.2 20.7 159 26-188 243-402 (417)
154 PRK15403 multidrug efflux syst 99.2 1.4E-09 3E-14 121.0 20.7 152 548-709 45-196 (413)
155 TIGR00900 2A0121 H+ Antiporter 99.2 1.7E-09 3.6E-14 114.6 20.0 163 526-702 15-177 (365)
156 PRK10091 MFS transport protein 99.2 1.4E-09 3.1E-14 118.9 19.9 164 527-709 20-183 (382)
157 PF07690 MFS_1: Major Facilita 99.2 5.6E-10 1.2E-14 117.8 15.8 151 548-708 26-176 (352)
158 PRK03633 putative MFS family t 99.2 3.7E-09 8E-14 115.5 22.6 149 25-180 219-367 (381)
159 PRK12307 putative sialic acid 99.2 1.6E-09 3.5E-14 119.2 19.9 176 513-708 21-196 (426)
160 PRK15402 multidrug efflux syst 99.2 2E-09 4.3E-14 118.3 20.2 151 549-709 43-193 (406)
161 TIGR00883 2A0106 metabolite-pr 99.1 1.8E-09 3.8E-14 115.4 19.0 158 14-175 227-391 (394)
162 PRK11102 bicyclomycin/multidru 99.1 1.5E-09 3.2E-14 117.2 18.1 162 529-709 10-171 (377)
163 TIGR00897 2A0118 polyol permea 99.1 6.3E-09 1.4E-13 114.8 23.0 164 14-183 230-399 (402)
164 TIGR00902 2A0127 phenyl propri 99.1 5.7E-09 1.2E-13 114.3 22.5 152 22-179 221-373 (382)
165 PRK11652 emrD multidrug resist 99.1 3.8E-09 8.1E-14 115.5 20.7 182 508-709 7-188 (394)
166 TIGR00903 2A0129 major facilit 99.1 1.8E-09 3.9E-14 118.8 18.2 163 527-709 8-170 (368)
167 TIGR00892 2A0113 monocarboxyla 99.1 1.8E-09 3.8E-14 121.8 18.0 160 15-178 250-414 (455)
168 COG2814 AraJ Arabinose efflux 99.1 5.5E-09 1.2E-13 116.0 21.3 162 525-705 28-189 (394)
169 PF03092 BT1: BT1 family; Int 99.1 1.2E-08 2.7E-13 114.9 24.6 156 27-187 11-177 (433)
170 TIGR00712 glpT glycerol-3-phos 99.1 2.9E-09 6.3E-14 118.9 18.7 153 550-708 57-210 (438)
171 PRK11646 multidrug resistance 99.1 5.9E-09 1.3E-13 115.4 20.8 164 525-707 25-188 (400)
172 PRK03699 putative transporter; 99.1 7.2E-09 1.6E-13 113.8 21.3 163 13-180 212-375 (394)
173 PRK09705 cynX putative cyanate 99.1 8.7E-09 1.9E-13 113.6 21.8 165 19-189 218-385 (393)
174 TIGR00886 2A0108 nitrite extru 99.1 5.7E-09 1.2E-13 111.8 19.5 167 523-707 14-191 (366)
175 TIGR00880 2_A_01_02 Multidrug 99.1 2.1E-09 4.6E-14 97.5 13.8 135 564-707 7-141 (141)
176 PRK15462 dipeptide/tripeptide 99.1 5.9E-09 1.3E-13 119.4 20.6 174 509-700 9-185 (493)
177 PRK09952 shikimate transporter 99.1 2E-08 4.3E-13 112.6 24.3 156 30-188 275-435 (438)
178 PRK11273 glpT sn-glycerol-3-ph 99.0 3E-08 6.5E-13 111.3 22.6 168 13-184 260-434 (452)
179 TIGR00924 yjdL_sub1_fam amino 99.0 1.4E-08 3E-13 115.6 19.9 164 519-699 19-187 (475)
180 COG2271 UhpC Sugar phosphate p 99.0 6.1E-09 1.3E-13 115.4 16.1 182 507-707 26-209 (448)
181 TIGR00882 2A0105 oligosacchari 99.0 2.4E-08 5.3E-13 109.5 20.9 141 41-183 252-393 (396)
182 PRK15075 citrate-proton sympor 99.0 3.9E-08 8.4E-13 109.8 22.8 143 18-164 250-398 (434)
183 PRK11043 putative transporter; 99.0 3.1E-08 6.6E-13 108.6 21.5 146 548-703 35-180 (401)
184 TIGR00887 2A0109 phosphate:H+ 99.0 1.3E-08 2.8E-13 116.0 19.1 173 13-188 295-491 (502)
185 PRK11128 putative 3-phenylprop 99.0 6.2E-08 1.3E-12 106.1 22.6 146 27-178 226-372 (382)
186 PF05977 MFS_3: Transmembrane 99.0 2.9E-08 6.2E-13 114.7 20.7 155 23-181 235-390 (524)
187 PRK15034 nitrate/nitrite trans 99.0 5.1E-08 1.1E-12 110.9 22.3 188 507-708 31-236 (462)
188 PRK08633 2-acyl-glycerophospho 99.0 2.1E-08 4.5E-13 124.3 20.7 155 30-187 257-412 (1146)
189 TIGR00792 gph sugar (Glycoside 99.0 3.8E-08 8.3E-13 108.6 20.3 113 41-153 255-375 (437)
190 PRK09584 tppB putative tripept 99.0 6.2E-08 1.3E-12 111.1 22.3 168 511-696 23-193 (500)
191 PRK11195 lysophospholipid tran 98.9 3.8E-08 8.1E-13 108.8 19.6 140 555-708 38-177 (393)
192 PRK06814 acylglycerophosphoeth 98.9 4.8E-08 1E-12 121.8 21.4 147 555-708 52-198 (1140)
193 PRK10207 dipeptide/tripeptide 98.9 5.8E-08 1.3E-12 111.1 20.2 168 508-694 13-184 (489)
194 TIGR00894 2A0114euk Na(+)-depe 98.9 1.8E-08 4E-13 112.9 15.0 152 548-707 70-222 (465)
195 PRK11010 ampG muropeptide tran 98.9 1.6E-07 3.5E-12 107.2 22.9 155 28-187 245-404 (491)
196 PF11700 ATG22: Vacuole efflux 98.9 1.7E-07 3.6E-12 107.2 22.7 165 17-187 294-469 (477)
197 TIGR00898 2A0119 cation transp 98.9 5.3E-08 1.2E-12 110.1 17.8 135 49-188 361-497 (505)
198 PRK10406 alpha-ketoglutarate t 98.9 2.8E-07 6E-12 102.8 23.3 157 26-187 263-425 (432)
199 TIGR02718 sider_RhtX_FptX side 98.9 2.2E-07 4.8E-12 101.7 21.4 148 28-179 230-385 (390)
200 COG0477 ProP Permeases of the 98.9 2.6E-07 5.6E-12 92.0 20.0 164 11-176 7-176 (338)
201 PF06609 TRI12: Fungal trichot 98.8 4.9E-08 1.1E-12 113.8 16.0 153 531-704 65-217 (599)
202 PF05631 DUF791: Protein of un 98.8 1.9E-06 4E-11 94.5 27.2 152 31-187 59-218 (354)
203 TIGR00885 fucP L-fucose:H+ sym 98.8 3.2E-07 6.8E-12 102.5 21.1 161 530-706 23-210 (410)
204 PF01770 Folate_carrier: Reduc 98.8 5E-06 1.1E-10 93.1 29.5 159 28-190 26-186 (412)
205 PF06813 Nodulin-like: Nodulin 98.8 3.6E-07 7.9E-12 96.2 18.6 144 4-152 1-151 (250)
206 KOG0569 Permease of the major 98.8 6.7E-07 1.5E-11 102.1 21.9 159 25-188 289-457 (485)
207 TIGR00901 2A0125 AmpG-related 98.8 2.2E-07 4.8E-12 100.0 17.1 118 23-142 226-355 (356)
208 COG2223 NarK Nitrate/nitrite t 98.8 2.4E-07 5.2E-12 102.8 17.4 150 548-706 43-195 (417)
209 PF01306 LacY_symp: LacY proto 98.7 3.9E-07 8.4E-12 102.1 18.8 172 14-190 233-405 (412)
210 KOG1330 Sugar transporter/spin 98.7 9.6E-09 2.1E-13 114.8 5.8 159 547-715 61-220 (493)
211 COG2270 Permeases of the major 98.7 3.9E-07 8.5E-12 101.3 18.1 181 3-188 251-431 (438)
212 TIGR01301 GPH_sucrose GPH fami 98.7 6E-07 1.3E-11 102.7 19.6 189 509-709 4-223 (477)
213 PRK10133 L-fucose transporter; 98.7 1.2E-06 2.7E-11 98.6 21.6 136 526-677 42-177 (438)
214 KOG0255 Synaptic vesicle trans 98.7 1.3E-07 2.9E-12 107.9 13.9 141 555-708 118-258 (521)
215 PRK09848 glucuronide transport 98.7 1.6E-06 3.6E-11 97.0 21.3 126 26-153 248-383 (448)
216 PRK11902 ampG muropeptide tran 98.7 2.7E-06 5.9E-11 93.8 22.5 144 29-180 233-385 (402)
217 TIGR01272 gluP glucose/galacto 98.6 2.5E-06 5.4E-11 91.9 21.0 130 36-172 173-302 (310)
218 TIGR00896 CynX cyanate transpo 98.6 1.3E-06 2.9E-11 94.1 18.9 131 24-159 215-347 (355)
219 TIGR00805 oat sodium-independe 98.6 4.9E-07 1.1E-11 106.8 15.9 160 547-708 61-284 (633)
220 PTZ00207 hypothetical protein; 98.6 2.3E-06 5E-11 100.2 20.8 165 526-707 43-208 (591)
221 PRK10429 melibiose:sodium symp 98.6 4.3E-06 9.3E-11 94.8 20.9 130 23-154 248-389 (473)
222 KOG0254 Predicted transporter 98.6 2.4E-06 5.2E-11 98.1 18.9 140 558-708 92-233 (513)
223 KOG2504 Monocarboxylate transp 98.6 9E-07 1.9E-11 102.1 15.3 168 9-180 301-471 (509)
224 KOG2615 Permease of the major 98.6 3.6E-07 7.9E-12 100.3 11.3 145 555-709 68-218 (451)
225 PRK09669 putative symporter Ya 98.5 4.8E-06 1E-10 93.3 20.4 127 26-154 249-384 (444)
226 PF03825 Nuc_H_symport: Nucleo 98.5 1E-05 2.2E-10 90.7 21.9 172 13-188 214-398 (400)
227 TIGR00806 rfc RFC reduced fola 98.5 6.1E-06 1.3E-10 94.0 20.1 159 528-706 44-204 (511)
228 KOG3098 Uncharacterized conser 98.5 9.2E-05 2E-09 84.3 29.4 105 49-154 56-160 (461)
229 KOG3762 Predicted transporter 98.5 6.1E-07 1.3E-11 102.0 11.4 158 526-702 387-545 (618)
230 PF13347 MFS_2: MFS/sugar tran 98.5 4.3E-06 9.4E-11 93.2 17.9 141 11-154 230-380 (428)
231 KOG2532 Permease of the major 98.5 2.8E-06 6.1E-11 97.0 16.5 153 546-706 65-218 (466)
232 KOG3764 Vesicular amine transp 98.4 7.4E-07 1.6E-11 98.4 9.5 147 556-711 107-254 (464)
233 KOG0253 Synaptic vesicle trans 98.2 6.4E-06 1.4E-10 90.3 11.0 180 2-188 325-522 (528)
234 PF02487 CLN3: CLN3 protein; 98.2 0.0023 4.9E-08 72.0 31.2 134 48-187 64-197 (402)
235 PF06963 FPN1: Ferroportin1 (F 98.2 0.0098 2.1E-07 67.7 36.6 158 497-671 250-410 (432)
236 TIGR00769 AAA ADP/ATP carrier 98.2 0.028 6.2E-07 64.7 42.4 145 7-155 8-188 (472)
237 PF06813 Nodulin-like: Nodulin 98.1 6.2E-05 1.3E-09 79.4 16.0 165 525-705 17-182 (250)
238 PRK11462 putative transporter; 98.1 0.00042 9.2E-09 78.7 23.7 126 26-153 248-382 (460)
239 KOG4686 Predicted sugar transp 98.1 7.9E-05 1.7E-09 79.5 15.2 120 31-154 290-410 (459)
240 KOG0637 Sucrose transporter an 98.1 5.7E-05 1.2E-09 85.0 14.9 144 7-152 33-199 (498)
241 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.003 6.5E-08 75.4 30.2 154 25-180 7-177 (654)
242 COG2807 CynX Cyanate permease 98.1 0.00033 7.1E-09 77.2 20.0 171 4-183 210-383 (395)
243 KOG2816 Predicted transporter 98.1 7.5E-05 1.6E-09 85.4 15.8 137 565-713 72-208 (463)
244 KOG3762 Predicted transporter 98.0 7.4E-05 1.6E-09 85.5 14.9 164 15-182 380-544 (618)
245 TIGR00788 fbt folate/biopterin 98.0 4.5E-05 9.8E-10 86.9 13.4 116 34-151 281-406 (468)
246 COG2211 MelB Na+/melibiose sym 98.0 0.00028 6.1E-09 80.4 19.6 140 14-154 244-392 (467)
247 PF06779 DUF1228: Protein of u 98.0 3.4E-05 7.4E-10 68.3 9.5 81 18-100 4-84 (85)
248 KOG1237 H+/oligopeptide sympor 98.0 0.0028 6.1E-08 74.4 27.6 164 25-195 57-252 (571)
249 COG3104 PTR2 Dipeptide/tripept 98.0 8.6E-05 1.9E-09 84.5 13.9 147 549-703 56-205 (498)
250 KOG2533 Permease of the major 98.0 0.0001 2.2E-09 85.0 14.7 151 549-709 76-232 (495)
251 PF00083 Sugar_tr: Sugar (and 98.0 1.7E-07 3.7E-12 104.2 -8.0 145 556-707 47-194 (451)
252 KOG0252 Inorganic phosphate tr 97.9 6.1E-05 1.3E-09 84.9 11.8 153 553-711 82-252 (538)
253 KOG4332 Predicted sugar transp 97.9 0.00035 7.6E-09 74.1 15.9 92 31-125 62-154 (454)
254 PF05978 UNC-93: Ion channel r 97.9 0.00059 1.3E-08 67.2 16.6 107 48-155 42-148 (156)
255 COG0738 FucP Fucose permease [ 97.8 0.0014 3.1E-08 73.1 18.7 159 13-178 243-402 (422)
256 TIGR00926 2A1704 Peptide:H+ sy 97.5 0.0026 5.7E-08 75.8 18.1 151 549-702 18-180 (654)
257 PF03209 PUCC: PUCC protein; 97.5 0.009 2E-07 67.0 20.6 148 30-179 233-392 (403)
258 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00079 1.7E-08 58.5 9.6 70 12-83 6-75 (77)
259 KOG2325 Predicted transporter/ 97.5 0.0016 3.6E-08 74.6 14.7 149 555-709 71-234 (488)
260 KOG3574 Acetyl-CoA transporter 97.5 0.016 3.4E-07 64.6 21.1 139 9-152 34-189 (510)
261 KOG2563 Permease of the major 97.4 0.0028 6.1E-08 71.7 15.3 122 554-680 78-203 (480)
262 TIGR00939 2a57 Equilibrative N 97.4 0.4 8.8E-06 54.8 32.0 115 555-672 307-427 (437)
263 PF05631 DUF791: Protein of un 97.3 0.014 3E-07 64.6 18.8 152 549-710 64-222 (354)
264 KOG3810 Micronutrient transpor 97.0 0.017 3.7E-07 63.6 15.5 135 53-189 52-186 (433)
265 PF03092 BT1: BT1 family; Int 96.6 0.021 4.4E-07 64.9 12.9 154 548-710 19-181 (433)
266 COG0477 ProP Permeases of the 96.6 0.13 2.9E-06 51.0 17.2 129 557-693 41-174 (338)
267 TIGR00769 AAA ADP/ATP carrier 96.4 0.3 6.5E-06 56.4 20.5 124 555-678 44-190 (472)
268 PF12832 MFS_1_like: MFS_1 lik 96.2 0.024 5.2E-07 49.3 8.2 66 519-594 9-74 (77)
269 PF00854 PTR2: POT family; In 96.1 0.028 6.1E-07 61.9 10.1 104 74-179 2-117 (372)
270 PRK03612 spermidine synthase; 96.0 0.79 1.7E-05 53.6 21.7 158 17-179 25-191 (521)
271 KOG1479 Nucleoside transporter 95.9 1.9 4E-05 48.9 23.1 120 555-677 282-402 (406)
272 KOG3098 Uncharacterized conser 95.9 0.47 1E-05 54.6 18.6 136 11-148 245-404 (461)
273 PF13000 Acatn: Acetyl-coenzym 95.8 1.3 2.8E-05 51.4 21.6 140 10-153 4-175 (544)
274 PF07672 MFS_Mycoplasma: Mycop 95.7 0.33 7.1E-06 51.8 15.5 57 128-184 2-61 (267)
275 PRK03612 spermidine synthase; 95.6 0.9 2E-05 53.1 19.9 50 651-700 143-193 (521)
276 PF05978 UNC-93: Ion channel r 95.5 0.41 8.9E-06 47.3 14.3 105 562-676 44-148 (156)
277 PF06963 FPN1: Ferroportin1 (F 95.4 0.52 1.1E-05 53.9 16.8 141 10-152 262-412 (432)
278 PF02487 CLN3: CLN3 protein; 94.7 0.43 9.3E-06 54.0 13.3 138 8-152 249-391 (402)
279 PF03219 TLC: TLC ATP/ADP tran 94.6 3 6.6E-05 48.5 20.2 142 535-678 41-205 (491)
280 PF01770 Folate_carrier: Reduc 94.6 1.7 3.7E-05 49.4 17.7 146 549-707 35-184 (412)
281 PF03219 TLC: TLC ATP/ADP tran 94.4 13 0.00029 43.3 36.0 147 6-156 24-204 (491)
282 KOG0637 Sucrose transporter an 94.1 0.11 2.3E-06 59.3 6.9 162 500-674 23-200 (498)
283 PF00854 PTR2: POT family; In 94.0 0.29 6.2E-06 54.0 10.1 116 586-703 2-122 (372)
284 COG3202 ATP/ADP translocase [E 93.0 22 0.00048 41.4 33.0 143 9-155 30-207 (509)
285 PF03137 OATP: Organic Anion T 92.4 0.037 8.1E-07 64.7 -0.1 130 547-677 31-201 (539)
286 KOG3626 Organic anion transpor 89.5 3.3 7.2E-05 50.2 12.4 163 547-711 125-349 (735)
287 COG3202 ATP/ADP translocase [E 86.4 74 0.0016 37.3 20.6 113 567-679 74-210 (509)
288 TIGR00939 2a57 Equilibrative N 84.1 8.2 0.00018 44.2 11.4 106 46-152 310-428 (437)
289 PF06779 DUF1228: Protein of u 83.5 7.3 0.00016 34.8 8.3 67 529-605 11-77 (85)
290 KOG1237 H+/oligopeptide sympor 82.9 37 0.00079 40.5 16.4 150 552-702 71-243 (571)
291 KOG1479 Nucleoside transporter 80.1 59 0.0013 37.2 15.9 28 512-539 20-47 (406)
292 PF01733 Nucleoside_tran: Nucl 72.7 1.2 2.5E-05 48.3 0.0 111 560-672 187-303 (309)
293 KOG3880 Predicted small molecu 71.4 39 0.00084 37.6 11.0 136 46-186 65-200 (409)
294 KOG3574 Acetyl-CoA transporter 69.7 56 0.0012 37.4 12.0 84 508-608 30-120 (510)
295 KOG3097 Predicted membrane pro 69.5 28 0.00061 38.9 9.6 72 54-126 69-140 (390)
296 PF02990 EMP70: Endomembrane p 69.0 51 0.0011 38.8 12.4 23 563-585 305-327 (521)
297 COG4262 Predicted spermidine s 65.1 2.5E+02 0.0055 32.0 16.5 95 28-123 29-132 (508)
298 PRK10263 DNA translocase FtsK; 64.9 65 0.0014 41.8 12.7 20 564-583 61-80 (1355)
299 KOG4332 Predicted sugar transp 63.5 84 0.0018 34.5 11.5 134 43-178 282-424 (454)
300 PF13000 Acatn: Acetyl-coenzym 59.8 53 0.0011 38.7 9.9 31 562-592 47-77 (544)
301 PF11947 DUF3464: Protein of u 58.6 27 0.00058 34.7 6.3 88 577-668 56-145 (153)
302 PF01733 Nucleoside_tran: Nucl 58.1 4 8.6E-05 44.2 0.6 105 47-151 186-303 (309)
303 PHA03239 envelope glycoprotein 52.3 1.3E+02 0.0028 34.7 11.2 26 344-369 398-423 (429)
304 PF06027 DUF914: Eukaryotic pr 48.7 1.6E+02 0.0034 32.9 11.1 14 507-520 131-144 (334)
305 PF05297 Herpes_LMP1: Herpesvi 47.4 6.2 0.00014 42.5 0.0 12 698-709 179-190 (381)
306 KOG3880 Predicted small molecu 45.7 65 0.0014 35.9 7.3 140 7-152 252-398 (409)
307 COG5336 Uncharacterized protei 43.1 43 0.00093 31.4 4.7 34 647-680 36-69 (116)
308 PF07760 DUF1616: Protein of u 40.5 2.9E+02 0.0063 29.9 11.5 56 99-157 22-77 (287)
309 COG2274 SunT ABC-type bacterio 39.5 6.3E+02 0.014 31.2 15.2 25 558-582 160-184 (709)
310 COG5336 Uncharacterized protei 36.5 1.1E+02 0.0024 28.7 6.3 39 48-86 47-86 (116)
311 KOG3810 Micronutrient transpor 36.0 1E+02 0.0023 34.9 7.1 96 44-139 272-369 (433)
312 PF01528 Herpes_glycop: Herpes 35.3 4.2E+02 0.0092 30.1 11.9 36 91-126 229-264 (374)
313 PF03547 Mem_trans: Membrane t 34.7 6.6E+02 0.014 27.7 22.4 17 55-71 7-23 (385)
314 COG1230 CzcD Co/Zn/Cd efflux s 34.4 4.5E+02 0.0098 28.9 11.6 24 582-605 84-107 (296)
315 PF10225 DUF2215: Uncharacteri 32.1 4.1E+02 0.0088 28.4 10.7 107 80-188 14-122 (249)
316 PF06912 DUF1275: Protein of u 32.0 5.5E+02 0.012 26.0 20.8 63 47-109 50-123 (209)
317 PF03547 Mem_trans: Membrane t 31.1 2.4E+02 0.0051 31.2 9.2 12 571-582 11-22 (385)
318 KOG1307 K+-dependent Ca2+/Na+ 31.0 3.1E+02 0.0067 32.1 9.9 15 25-39 79-93 (588)
319 COG4769 Predicted membrane pro 28.1 1.5E+02 0.0032 30.0 6.0 55 52-112 82-136 (181)
320 PF12670 DUF3792: Protein of u 26.5 5.3E+02 0.012 24.0 13.9 29 566-594 45-74 (116)
321 KOG4255 Uncharacterized conser 24.9 1.1E+03 0.023 27.0 14.4 97 27-126 32-142 (439)
322 KOG1619 Cytochrome b [Energy p 24.7 8.9E+02 0.019 26.0 15.1 43 594-636 97-147 (245)
323 PF06123 CreD: Inner membrane 24.2 1.2E+03 0.025 27.2 13.2 29 72-100 377-407 (430)
324 PRK11715 inner membrane protei 23.6 1.2E+03 0.026 27.1 13.2 77 17-102 336-415 (436)
325 COG1230 CzcD Co/Zn/Cd efflux s 22.4 1.1E+03 0.023 26.1 16.7 76 3-86 22-100 (296)
326 COG4956 Integral membrane prot 22.4 1.1E+03 0.023 26.4 11.7 21 587-607 80-100 (356)
327 PHA03242 envelope glycoprotein 22.2 6.1E+02 0.013 29.4 10.3 34 92-125 244-277 (428)
328 PF10183 ESSS: ESSS subunit of 21.6 1.4E+02 0.003 27.7 4.3 31 159-189 55-85 (105)
329 PF02632 BioY: BioY family; I 21.3 4.4E+02 0.0096 25.8 8.0 26 49-74 59-84 (148)
330 PF07672 MFS_Mycoplasma: Mycop 21.1 9.3E+02 0.02 26.2 10.9 103 45-148 143-255 (267)
331 PRK10263 DNA translocase FtsK; 20.7 6.3E+02 0.014 33.4 10.9 20 52-71 61-80 (1355)
332 PF06123 CreD: Inner membrane 20.7 1.4E+03 0.029 26.6 13.9 66 65-134 313-383 (430)
333 PF05297 Herpes_LMP1: Herpesvi 20.6 33 0.00072 37.2 0.0 18 685-702 170-187 (381)
334 PF12805 FUSC-like: FUSC-like 20.5 6.9E+02 0.015 26.7 10.0 37 77-113 3-40 (284)
335 TIGR02230 ATPase_gene1 F0F1-AT 20.1 4.5E+02 0.0097 24.4 7.2 39 566-604 54-92 (100)
336 PF06800 Sugar_transport: Suga 20.0 1.1E+03 0.025 25.5 13.6 34 678-711 217-250 (269)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=389.30 Aligned_cols=447 Identities=30% Similarity=0.508 Sum_probs=376.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhCCCCchh----HHHHHHHHHHHHHHHHHHhHHHhhhhh
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIK--------REFHLETEPT----IEGLIVAMSLIGATCITTCSGAIADWL 70 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~--------~~lgl~~s~s----~~gll~Sl~~IG~~Ig~~~~g~LsDrf 70 (732)
+..+..+.++++.+-.|+....+++..+.+. +.+|...++. .++.+++++.+|.++|+++.+.++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445666777777889999888888765433 3345322332 578899999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHH
Q 004750 71 GRRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL 147 (732)
Q Consensus 71 GrRkvLLigllL~aIgslL~a~---a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~i 147 (732)
|||..+++..++..++.+++.+ .+++.+++++|++.|+..|......+.++.|..|++.||.+..+.+++.++|..+
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 9999999998888887777765 5788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhc-ccccHHHHHHHHHhhcCcCchhHHHHHHhhhc
Q 004750 148 AYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVS-KGRMLEAKKVLQSLRGREDVAGEMALLVEGLG 226 (732)
Q Consensus 148 g~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (732)
++....-..+.+...|.+.+.+..+++++.++ .+.++|||||||.. +++.++|++.++.+++.+|++.+..
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e------- 239 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIE------- 239 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHH-------
Confidence 98777777777888999999999999988665 47889999999988 8999999999999998875332221
Q ss_pred cccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCC
Q 004750 227 VGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQ 306 (732)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (732)
T Consensus 240 -------------------------------------------------------------------------------- 239 (485)
T KOG0569|consen 240 -------------------------------------------------------------------------------- 239 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccc
Q 004750 307 GSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMR 386 (732)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (732)
+-++|..+.
T Consensus 240 -------------------------~~~~e~~~~---------------------------------------------- 248 (485)
T KOG0569|consen 240 -------------------------EMLREIEEE---------------------------------------------- 248 (485)
T ss_pred -------------------------HHHHHHHHh----------------------------------------------
Confidence 000000000
Q ss_pred cCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHH
Q 004750 387 HGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALV 466 (732)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~ 466 (732)
T Consensus 249 -------------------------------------------------------------------------------- 248 (485)
T KOG0569|consen 249 -------------------------------------------------------------------------------- 248 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcc-cchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccch
Q 004750 467 SQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAE-PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVL 545 (732)
Q Consensus 467 ~~~~~~~~~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 545 (732)
+.++.+..++.++++ +..++...+++.+...+|++|++++.+|...+++++|+++
T Consensus 249 -----------------------~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~- 304 (485)
T KOG0569|consen 249 -----------------------ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP- 304 (485)
T ss_pred -----------------------ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH-
Confidence 000112456777774 5678889999999999999999999999999999998774
Q ss_pred hcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhccc-chhhHHHHHHHH
Q 004750 546 LSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGS-VVHASISTVSVV 624 (732)
Q Consensus 546 ~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 624 (732)
..+...+...++..++.++++.+++||+|||++++.++.++.+..+++.......... .+..+..+.+++
T Consensus 305 ---------~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~ 375 (485)
T KOG0569|consen 305 ---------EEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF 375 (485)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 6777778888999999999999999999999999999999999988887765544333 234455678889
Q ss_pred HHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhc
Q 004750 625 LYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~ 704 (732)
+|.+.|++|.+|+++.+.+|++|+..|+.+.+++.++.|+.+++....++.+.+..|. ..|++|++.++++.++.++.+
T Consensus 376 ~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~l 454 (485)
T KOG0569|consen 376 LFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYL 454 (485)
T ss_pred HHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999996 799999999999999999999
Q ss_pred cCCCCCChhhhhhhhhcc
Q 004750 705 PETKGMPLEVITEFFAVG 722 (732)
Q Consensus 705 ~et~~~~~~~~~~~~~~~ 722 (732)
||||||+.+|+.+.++++
T Consensus 455 PETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 455 PETKGRTPYEIIEELEKR 472 (485)
T ss_pred cccCCCCHHHHHHHHHhC
Confidence 999999999998888766
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-38 Score=359.07 Aligned_cols=442 Identities=21% Similarity=0.239 Sum_probs=311.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C--CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREF-H--LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~l-g--l~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLig 79 (732)
..+.++++++++.+++++|.+.++.++|.+..++ + ...+..+.+++.+.+.+++.++++++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 4566788899999999999999999999887753 1 111566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004750 80 SVLYFIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 80 llL~aIgslL~a~a~s------~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l 153 (732)
+++.+++.++++++++ ++.++++|++.|++.|..++....++.|++|+++||+++++.+.+..+|.++++.+..
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888765 7899999999999999999999999999999999999999999999999999865554
Q ss_pred HHHh---------------------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHH-HHHHHHHhhcC
Q 004750 154 GMSL---------------------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE-AKKVLQSLRGR 211 (732)
Q Consensus 154 ~~~l---------------------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~-~~~~~~~~~~~ 211 (732)
.... ....+||++|.+.++++++.++ ..+++||||+|+..++|.++ +++.+.+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 3221 0124799999988888877554 46789999999988888743 55444443321
Q ss_pred cCchhHHHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCc
Q 004750 212 EDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDP 291 (732)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 291 (732)
+..+ +.++++
T Consensus 252 ~~~~-------------------------------------~~~~~~--------------------------------- 261 (502)
T TIGR00887 252 KIEA-------------------------------------EPDEVE--------------------------------- 261 (502)
T ss_pred cccc-------------------------------------Cccccc---------------------------------
Confidence 1000 000000
Q ss_pred chhccccccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCccccccccccc
Q 004750 292 LVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIE 371 (732)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (732)
+++
T Consensus 262 -----------------------------------------------------------------------------~~~ 264 (502)
T TIGR00887 262 -----------------------------------------------------------------------------KAS 264 (502)
T ss_pred -----------------------------------------------------------------------------chh
Confidence 000
Q ss_pred ccCCCCCCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeecccc
Q 004750 372 KDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGE 451 (732)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~ 451 (732)
++
T Consensus 265 ~~------------------------------------------------------------------------------ 266 (502)
T TIGR00887 265 TA------------------------------------------------------------------------------ 266 (502)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccchhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccc----hhhHHHHHHHHHHHHHhhhhH
Q 004750 452 DVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPG----VKRALMVGVGIQILQQLSGIN 527 (732)
Q Consensus 452 ~~~~g~~~~~~~~l~~~~~~~~~~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~g~~ 527 (732)
.+..+.++++++++. .++.+ +++.+..+.+....+
T Consensus 267 ----------------------------------------~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~y 305 (502)
T TIGR00887 267 ----------------------------------------VEVPKASWSDFFTHFFKWRHGKHL-LGTAGSWFLLDIAFY 305 (502)
T ss_pred ----------------------------------------ccchhhhHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHHHH
Confidence 000012355665421 22222 222222222223345
Q ss_pred HHHHhHHHHHHHhcccchhcccC-CC-hhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 528 GVLYYTPQILEQAGVGVLLSNLG-IS-SASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 528 ~~~~~~~~~~~~~g~~~~~~~l~-~~-~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
++..|.|.++++.|++....... .. .-........+..++.+++.+++++++||+|||++++.+..++.++++++.+.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 67778999998877652100000 00 00011112334456677889999999999999999888877777766655543
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh------
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS------ 679 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~------ 679 (732)
.... ..+ ..+...+++.++++.+..++.+++++|++|++.|+++.|+++.+.+++++++|++.|++.+.
T Consensus 386 ~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 460 (502)
T TIGR00887 386 YNHL---STH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKG 460 (502)
T ss_pred HHhc---chh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccc
Confidence 2110 001 11222223333445667778888899999999999999999999999999999999999884
Q ss_pred ----hchhHHHHHHHHHHHHHHHHHHHhccCCCCCChhhhhh
Q 004750 680 ----VGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITE 717 (732)
Q Consensus 680 ----~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~ 717 (732)
.++..+|++++++++++.++. +++||||++++||+++
T Consensus 461 ~~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 461 YPTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred ccccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 345568888888888876654 5789999999998865
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=361.64 Aligned_cols=447 Identities=38% Similarity=0.687 Sum_probs=367.5
Q ss_pred hHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCCC---ch--hHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHH
Q 004750 4 AALVAIAAAIGNLLQGWD--NATIAGAVLYIKREFHLET---EP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPML 76 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~--~~~~~~~~~~I~~~lgl~~---s~--s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvL 76 (732)
.....+.+.++.+..+++ .....++.+.+.++..... +. ++.+|+.+...++..++++++|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 455677778888888887 5666777777777542211 22 3559999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004750 77 IVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 77 LigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~ 156 (732)
+++.++..++.+++++++++++++++|++.|+|.|....+.+.+++|..|++.||...++.+...++|..++.+......
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999944433322
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCc--CchhHHHHHHhhhccccccchh
Q 004750 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE--DVAGEMALLVEGLGVGGETSLE 234 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (732)
.. ..+||.++++..+++++..+. .+++||||+|+.++++..++++.+.++++.+ +...+...+.
T Consensus 203 ~~-~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~------------ 268 (513)
T KOG0254|consen 203 KV-YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLK------------ 268 (513)
T ss_pred cC-CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHH------------
Confidence 11 148999999999999998877 8999999999999999999999999988732 2111111000
Q ss_pred hhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccc
Q 004750 235 EYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLF 314 (732)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (732)
++.
T Consensus 269 ----------------------~~~------------------------------------------------------- 271 (513)
T KOG0254|consen 269 ----------------------IKL------------------------------------------------------- 271 (513)
T ss_pred ----------------------HHH-------------------------------------------------------
Confidence 000
Q ss_pred cccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCC
Q 004750 315 PHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGN 394 (732)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (732)
.+|
T Consensus 272 -------------------~~~---------------------------------------------------------- 274 (513)
T KOG0254|consen 272 -------------------LVE---------------------------------------------------------- 274 (513)
T ss_pred -------------------HHh----------------------------------------------------------
Confidence 000
Q ss_pred CCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhh
Q 004750 395 AGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSK 474 (732)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~ 474 (732)
T Consensus 275 -------------------------------------------------------------------------------- 274 (513)
T KOG0254|consen 275 -------------------------------------------------------------------------------- 274 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChh
Q 004750 475 ELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSA 554 (732)
Q Consensus 475 ~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~ 554 (732)
.....++..+++++++..++++++++.++.++|++|++.+.+|.+++++..|... .
T Consensus 275 ---------------~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~---------~ 330 (513)
T KOG0254|consen 275 ---------------AEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS---------D 330 (513)
T ss_pred ---------------hhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC---------c
Confidence 0000112246677777789999999999999999999999999999999987652 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc----cchhhHHHHHHHHHHHHHH
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG----SVVHASISTVSVVLYFCCF 630 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 630 (732)
. ...+.+.++..+++.+++.+++||+|||++++.+...+.++++++......... .....+..+...+++...|
T Consensus 331 ~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f 408 (513)
T KOG0254|consen 331 T--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSF 408 (513)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHH
Confidence 1 455566778888888899999999999999999999999999998876665432 2234567788889999999
Q ss_pred hhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHH-HHHHhccCCCC
Q 004750 631 VMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWI-FVFIKVPETKG 709 (732)
Q Consensus 631 ~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~-~~~~~~~et~~ 709 (732)
..++++++|.+.+|++|.+.|+.+.+++..+.|+.+.+....+..+.+..+....|.++++++.+.++ ++++++||||+
T Consensus 409 ~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 409 AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 99999999999999999999999999999999999999999999888876656788888888888888 89999999999
Q ss_pred CChhhhhhhhhccCC
Q 004750 710 MPLEVITEFFAVGAS 724 (732)
Q Consensus 710 ~~~~~~~~~~~~~~~ 724 (732)
+++|++++.+.++..
T Consensus 489 ~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 489 LTLEEINELFEEGIK 503 (513)
T ss_pred CcHHHHHHHHHcCCc
Confidence 999999998877643
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.3e-37 Score=344.26 Aligned_cols=436 Identities=28% Similarity=0.517 Sum_probs=327.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREF--------HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~l--------gl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkv 75 (732)
...+++++.++.+.+++|...+++..|.+.+++ +. +..+.+++.+++.++..++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 355677778899999999999999999999988 66 78899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH
Q 004750 76 LIVSSVLYFIGGLVMLWS------------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 76 LLigllL~aIgslL~a~a------------~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~ 143 (732)
++++.++.+++.++++++ +.+..++++|++.|++.|..++...+++.|++|+++||+++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999988877753 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH------hhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhH
Q 004750 144 GMFLAYCMVFGMS------LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGE 217 (732)
Q Consensus 144 G~~ig~l~~l~~~------l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
|.+++++...... .....+||+.|++.+++.++..+ ..+++||+|+|+..+++.+++++..++....+.....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999854433221 11346999999998888777554 4678999999987777766655554443322110000
Q ss_pred HHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccc
Q 004750 218 MALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFG 297 (732)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (732)
. ++++
T Consensus 247 ~------------------------------------~~~~--------------------------------------- 251 (479)
T PRK10077 247 L------------------------------------QEIK--------------------------------------- 251 (479)
T ss_pred H------------------------------------HHHH---------------------------------------
Confidence 0 0000
Q ss_pred cccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCC
Q 004750 298 SVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPP 377 (732)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (732)
+
T Consensus 252 --------------------------------------~----------------------------------------- 252 (479)
T PRK10077 252 --------------------------------------H----------------------------------------- 252 (479)
T ss_pred --------------------------------------H-----------------------------------------
Confidence 0
Q ss_pred CCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhh
Q 004750 378 AHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGG 457 (732)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~ 457 (732)
+..+ +
T Consensus 253 -----------------------------------~~~~------------------~---------------------- 257 (479)
T PRK10077 253 -----------------------------------SLDH------------------G---------------------- 257 (479)
T ss_pred -----------------------------------HHHH------------------h----------------------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHH
Q 004750 458 EVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQIL 537 (732)
Q Consensus 458 ~~~~~~~l~~~~~~~~~~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 537 (732)
....+.++. ......+.++....+.+..+++.+.+|.|.++
T Consensus 258 --------------------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 298 (479)
T PRK10077 258 --------------------------------------RKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF 298 (479)
T ss_pred --------------------------------------hhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 000000000 01122333444455666667788889999999
Q ss_pred HHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhH
Q 004750 538 EQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHAS 617 (732)
Q Consensus 538 ~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 617 (732)
++.|.+. ..+.+...+.++..+++.+++++++||+|||++++.+..++.++++++...... ..+..
T Consensus 299 ~~~g~~~----------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~----~~~~~ 364 (479)
T PRK10077 299 KTLGAST----------DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT----QAPGI 364 (479)
T ss_pred HHcCCCC----------chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc----CcccH
Confidence 8766542 334445556778889999999999999999999999988888877776543211 11223
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH------HhhchhHHHHHHHH
Q 004750 618 ISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL------NSVGLAGVFGMYAV 691 (732)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~------~~~g~~~~f~~~~~ 691 (732)
..+..++++..+++.++.+..+.+++|++|++.|+++.|+++.+.++|.++++.+++.+. +..++...|+++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 444 (479)
T PRK10077 365 VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence 344455666666666667788899999999999999999999999999999988887655 46788889999999
Q ss_pred HHHHHHHHHHHhccCCCCCChhhhhhhhhccCC
Q 004750 692 VCVISWIFVFIKVPETKGMPLEVITEFFAVGAS 724 (732)
Q Consensus 692 ~~~i~~~~~~~~~~et~~~~~~~~~~~~~~~~~ 724 (732)
+++++.++.+++.||||++++|++++.++++.+
T Consensus 445 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 477 (479)
T PRK10077 445 MGVLAALFMWKFVPETKGKTLEEMEALWEPETK 477 (479)
T ss_pred HHHHHHHHHHhccccCCCCCHHHHHHHHhhccc
Confidence 888888888888999999999999888866543
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.2e-37 Score=365.26 Aligned_cols=208 Identities=21% Similarity=0.300 Sum_probs=186.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
+..|.++++++++.++.+++...++.++|.+.+++++ +..+.+++.+++.++.+++++++|+++||+|||++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3467888889999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL---- 157 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l---- 157 (732)
+.++++++++++++++.++++|++.|++.|+..++..+++.|++|+++||+++++.+.++.+|.++++.+......
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999998655433221
Q ss_pred -------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCc
Q 004750 158 -------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE 212 (732)
Q Consensus 158 -------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~ 212 (732)
....+||+++++.++++++.+ +.++++||||+|+..+++.+++.+.++++...+
T Consensus 321 ~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 321 SFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 112479999999888777654 557889999999999999999999998887654
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=4.7e-35 Score=318.92 Aligned_cols=442 Identities=36% Similarity=0.628 Sum_probs=322.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------CchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE------TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPML 76 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~------~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvL 76 (732)
+.+...+++.++.++.+++...++++++.+..+++.+ .+..+.+++.+++.++..++++++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 3455666777788899999999999999999998883 2378999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH-
Q 004750 77 IVSSVLYFIGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV- 152 (732)
Q Consensus 77 LigllL~aIgslL~a~a---~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~- 152 (732)
+++.++.+++.+++.+. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999988654 34568999999999999999999999999999999999999999999999999996554
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccc
Q 004750 153 FGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETS 232 (732)
Q Consensus 153 l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (732)
.........+||+.|++.++..++. ++..+++||+|+++..+++.+++++..++....++.....
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 249 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKEL-------------- 249 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHH--------------
Confidence 1133445679999999976665554 4456778999987665555444333322221111000000
Q ss_pred hhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccc
Q 004750 233 LEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRST 312 (732)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (732)
.++.+.
T Consensus 250 ------------------~~~~~~-------------------------------------------------------- 255 (481)
T TIGR00879 250 ------------------LDELEL-------------------------------------------------------- 255 (481)
T ss_pred ------------------HHHHHH--------------------------------------------------------
Confidence 000000
Q ss_pred cccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCcccc
Q 004750 313 LFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQ 392 (732)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (732)
.++. +
T Consensus 256 --------------------~~~~----------------------------~--------------------------- 260 (481)
T TIGR00879 256 --------------------IDIK----------------------------R--------------------------- 260 (481)
T ss_pred --------------------HHHH----------------------------H---------------------------
Confidence 0000 0
Q ss_pred CCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhh
Q 004750 393 GNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALC 472 (732)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~ 472 (732)
+
T Consensus 261 ----------------------~--------------------------------------------------------- 261 (481)
T TIGR00879 261 ----------------------S--------------------------------------------------------- 261 (481)
T ss_pred ----------------------H---------------------------------------------------------
Confidence 0
Q ss_pred hhhhhccCCCCcccCCCCcccccCCChhhhccc--chhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccC
Q 004750 473 SKELLDQNPIGPAMIHPSETAAKGFSWKDLAEP--GVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLG 550 (732)
Q Consensus 473 ~~~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~ 550 (732)
. +...++..++++++. ..+++.++...+..+.+..+.+.+.+|.|.++++.|++
T Consensus 262 -~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------- 317 (481)
T TIGR00879 262 -I----------------EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVS------- 317 (481)
T ss_pred -H----------------HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCC-------
Confidence 0 000000012233321 12455566666666666666677788999988876544
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccc--hhhHHHHHHHHHHHH
Q 004750 551 ISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSV--VHASISTVSVVLYFC 628 (732)
Q Consensus 551 ~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 628 (732)
. ..+.....+..+..+++.++++++.||+|||+++..+..++.++++++.+......... ...+..+...+++..
T Consensus 318 --~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 318 --T-DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred --c-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 3 44555666778888999999999999999999988887777666666553222111100 013344455566667
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
+++.+..+....++.|.+|++.|+++.|+.+.+.++|+++++.+.+.+.+..|+...|++++++++++.++.+++.||+|
T Consensus 395 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 395 FFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 77777778888888999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred CCChhh
Q 004750 709 GMPLEV 714 (732)
Q Consensus 709 ~~~~~~ 714 (732)
+++.++
T Consensus 475 ~~~~~~ 480 (481)
T TIGR00879 475 GRTLEE 480 (481)
T ss_pred CCChhh
Confidence 877653
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.6e-42 Score=383.22 Aligned_cols=434 Identities=38% Similarity=0.628 Sum_probs=340.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHhCCCC-------chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIK--REFHLET-------EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~--~~lgl~~-------s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLig 79 (732)
+++.++.+.+|+|...++...+... ..+..+. +..+.+++.+...+|..+|++++|.++||+|||+.+.++
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~ 82 (451)
T PF00083_consen 3 LIASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS 82 (451)
T ss_pred EeeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 3456777999999999888776554 2333321 123578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004750 80 SVLYFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 80 llL~aIgslL~a~a~---s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~ 156 (732)
.++..++.++.++++ +++.++++|++.|++.|...+....++.|..|+++|++..++.+.+..+|..++.+......
T Consensus 83 ~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 83 ALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999 99999999999999999999999999999999999999999999999999999865543332
Q ss_pred hhc-cchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhh
Q 004750 157 LMT-APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEE 235 (732)
Q Consensus 157 l~~-~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (732)
... ..+||+.+.+.++++++.++ ..+++||||+|+..++|.+++++.++++++.+..+
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~-------------------- 221 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED-------------------- 221 (451)
T ss_pred cccccccccccccccccccccccc-cccccccccceeccccccccccccccccccccccc--------------------
Confidence 111 24699999999999887554 46889999999999999999888877754432100
Q ss_pred hhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccc
Q 004750 236 YIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFP 315 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (732)
T Consensus 222 -------------------------------------------------------------------------------- 221 (451)
T PF00083_consen 222 -------------------------------------------------------------------------------- 221 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCC
Q 004750 316 HFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNA 395 (732)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (732)
+|++|+ -
T Consensus 222 ---------------~~~~~~-----~----------------------------------------------------- 228 (451)
T PF00083_consen 222 ---------------EEIEEI-----K----------------------------------------------------- 228 (451)
T ss_pred ---------------cccccc-----c-----------------------------------------------------
Confidence 000000 0
Q ss_pred CCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhh
Q 004750 396 GEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKE 475 (732)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~ 475 (732)
T Consensus 229 -------------------------------------------------------------------------------- 228 (451)
T PF00083_consen 229 -------------------------------------------------------------------------------- 228 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCCCcccCCCCcccccCCChhhhcccc-hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChh
Q 004750 476 LLDQNPIGPAMIHPSETAAKGFSWKDLAEPG-VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSA 554 (732)
Q Consensus 476 l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~ 554 (732)
.+.++.++++.+++++++.+ .++++++.+.+..++++++.+.+.+|.+.++++.|.+. .
T Consensus 229 -----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~---------~ 288 (451)
T PF00083_consen 229 -----------AEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISN---------S 288 (451)
T ss_pred -----------cccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccc---------c
Confidence 00000000114566777543 46778888888888888888889999999999877653 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHH-HHHHhhcccchhhHHHHHHHHHHHHHHhhc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLV-LSSVIKMGSVVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (732)
...+.+..+..+++.+++.+++||+|||++++.+..++.++.+.+. ................++...++.+++..+
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g 365 (451)
T PF00083_consen 289 ---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLG 365 (451)
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccc
Confidence 3344455677778888889999999999999998888887777665 111111110112334455566677778888
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004750 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLE 713 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~~~ 713 (732)
++++.+.+++|++|++.|+++.+++..++++++++.+.+.+.+.+..+....|++++++++++.++.++++||||++++|
T Consensus 366 ~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ 445 (451)
T PF00083_consen 366 WGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLE 445 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHH
Confidence 89999999999999999999999999999999999999999999888866799999999999999999999999999999
Q ss_pred hhhhhh
Q 004750 714 VITEFF 719 (732)
Q Consensus 714 ~~~~~~ 719 (732)
|++++|
T Consensus 446 ei~~~f 451 (451)
T PF00083_consen 446 EIQEMF 451 (451)
T ss_pred HHHhhC
Confidence 999875
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.9e-32 Score=309.31 Aligned_cols=187 Identities=20% Similarity=0.324 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh--HHHH--HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPT--IEGL--IVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s--~~gl--l~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigl 80 (732)
+.++++++++++++++|...++.+.|.+.++++.+.++. ..+. +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 346677889999999999999999999999997532332 1222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 81 VLYFIGGLVMLWSPNVYV--------LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 81 lL~aIgslL~a~a~s~~l--------LiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
++++++++++++++++.. ++++|+++|++.|+.++...+++.|++|+++||++.++.+.+..+|.+++..+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 888999999999999999999999999999999999999999999998886544
Q ss_pred HHHH--h----hccchhHHHHHHHHHHHHHHHHHHHhhccCCchhh
Q 004750 153 FGMS--L----MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWL 192 (732)
Q Consensus 153 l~~~--l----~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l 192 (732)
.... . ....|||++|++.++++++. ++...++||||+|.
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~ 219 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQ 219 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHH
Confidence 2221 1 23579999999987766653 34456789998864
No 9
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.4e-31 Score=289.96 Aligned_cols=186 Identities=28% Similarity=0.329 Sum_probs=168.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
++.|.+++++++..++++++...++.+.|.+.+++|. ++.+.|++.+++.++..++++++|+++||+|||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 4678899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
+.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++. ......+..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~ 166 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASV--IGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999944 344555667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
+||+.|++.+++.++.+++..+++||+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 999999998887777666666778987653
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.8e-33 Score=312.20 Aligned_cols=176 Identities=30% Similarity=0.493 Sum_probs=157.1
Q ss_pred HHHHHHHHHhCCCCc---hhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 004750 27 GAVLYIKREFHLETE---PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (732)
Q Consensus 27 ~~~~~I~~~lgl~~s---~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R 103 (732)
+..|.+.+++++ + ..+.+++.+++.++..++++++|+++||+|||++++++.++.+++.++++++++++.++++|
T Consensus 110 ~~~~~i~~e~~l--~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDL--VCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecc--eechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 456788899999 6 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 004750 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 104 ~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
++.|++.+..++...+++.|++|+++|+++.++.+.+..+|.+++++.. .... +||+.|++.++++++.+++ .+
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~---~wr~~~~~~~i~~~~~~~~-~~ 261 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA--YFIP---DWRWLQLAVSLPTFLFFLL-SW 261 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH--HHhh---HHHHHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999999999999999999999999999885443 3222 4999999999988876655 47
Q ss_pred hccCCchhhhcccccHHHHHHHHHhhc
Q 004750 184 YLPESPRWLVSKGRMLEAKKVLQSLRG 210 (732)
Q Consensus 184 ~~~esp~~l~~~~~~~~~~~~~~~~~~ 210 (732)
++||||+|+..+++.+++.+.+++..+
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~ 288 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAK 288 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHH
Confidence 899999999999998888877766543
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8e-32 Score=297.86 Aligned_cols=185 Identities=22% Similarity=0.201 Sum_probs=169.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
+|..++.++++++++++|+..++.+.|.+.+++|+ +..+.|++.+++.+++.+++++.|+++||+|||+++.++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 68889999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----hc
Q 004750 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----MT 159 (732)
Q Consensus 84 aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l----~~ 159 (732)
++++++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++++.+.++|.++++........ .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999555433221 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+||++|.+.++++++..++.++++||+|+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 4699999999999888877777788999984
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.3e-31 Score=293.41 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=164.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
++.+.+...+++++..++...++..+|.+.+++|+ +..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 45666778888899999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 004750 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (732)
Q Consensus 84 aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~W 163 (732)
++++++++++++++.+++.|++.|++.|..++...+++.|++|+++|++++++.+.+..+|.++++ .....+.+..+|
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~--~~~~~l~~~~gw 176 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP--LVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHcccH
Confidence 999999999999999999999999999999999999999999999999999999999999999994 444455566799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 164 RLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 164 r~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
|+.|.+.++++++..++.+++++|+|+
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 999999988877766666667888764
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.1e-31 Score=300.99 Aligned_cols=185 Identities=18% Similarity=0.004 Sum_probs=161.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
.+.++.++++++++...++..++.++|.+.+++|+ +..+.|++.+++.+++.++++++|+++||+|||+++.++++++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 55678888999999999999999999999999999 8999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004750 84 FIGGLVMLW-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 84 aIgslL~a~-----a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~ 158 (732)
+++++++++ +++++.+++.|++.|++.+...+...+++.||+|+++||+++++.+.+.++|.++++.+.......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 887776665 589999999999999999999999999999999999999999999999999999996654332221
Q ss_pred -ccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 159 -TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 159 -~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...+||..|.+.++++++..++.+++.+++|+
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 12269999999888888777766667777663
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2e-30 Score=284.41 Aligned_cols=168 Identities=23% Similarity=0.315 Sum_probs=153.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
..+..+..+.++++.++++.....+++|.+.+++|+ ++.+.+++.+++.+++.++++++|+++||+|||++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 445667888899999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.++++++++++++++.++++|++.|++.|..++....++.|++|+++|++++++.+.+..+|.++++ .....+.+..+
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~--~l~~~l~~~~~ 170 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA--YFMPSFAEAYG 170 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH--HHHHHHcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999984 34444556679
Q ss_pred hHHHHHHHHHHH
Q 004750 163 WRLMLGVLFIPS 174 (732)
Q Consensus 163 Wr~~~~i~~~l~ 174 (732)
||++|++..+..
T Consensus 171 w~~~f~i~~~~~ 182 (426)
T PRK12307 171 WRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999998755433
No 15
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-31 Score=284.94 Aligned_cols=442 Identities=19% Similarity=0.209 Sum_probs=327.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
|..|.+.+.+..+++.+.+..-....+.|.+...+|+ +..+..+++...+.+..+++..||.++|++|||+.+.+...
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 3467888999999999999988888899999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
..++..++.+++||+..+.+.|.+.|+|.|+ .|...++-.|..|..+|++.+-+. .++.+|.++...+ ....+...
T Consensus 152 ~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~l--aw~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALL--AWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHH--HHHHHHhh
Confidence 9999999999999999999999999999999 799999999999999999988887 9999999999544 45557778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhhhhhccc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPA 241 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (732)
||||.......+..+.+ ...+++||||||+..++++.++...++++...|...
T Consensus 228 gwr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~q-------------------------- 280 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAA-RFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQ-------------------------- 280 (528)
T ss_pred hHHHHHHHHHhHHHHHH-HHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCC--------------------------
Confidence 99999988887666644 457889999999999999999999999988766321
Q ss_pred cccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccccccccc
Q 004750 242 NDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMF 321 (732)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (732)
-|+-.+..|.+.
T Consensus 281 ------------------------------------------------lplgvl~~s~~~-------------------- 292 (528)
T KOG0253|consen 281 ------------------------------------------------LPLGVLESSAID-------------------- 292 (528)
T ss_pred ------------------------------------------------CCcceeeeehhh--------------------
Confidence 000000000000
Q ss_pred ccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCccc
Q 004750 322 SVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGM 401 (732)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (732)
++|.|.+ |. |
T Consensus 293 ---------------~~e~e~~----~~------~--------------------------------------------- 302 (528)
T KOG0253|consen 293 ---------------RQEQEES----DL------D--------------------------------------------- 302 (528)
T ss_pred ---------------hhhhhhh----ch------h---------------------------------------------
Confidence 0000100 00 0
Q ss_pred ccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCC
Q 004750 402 GIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNP 481 (732)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~~ 481 (732)
T Consensus 303 -------------------------------------------------------------------------------- 302 (528)
T KOG0253|consen 303 -------------------------------------------------------------------------------- 302 (528)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcc----c----chhccc----
Q 004750 482 IGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGV----G----VLLSNL---- 549 (732)
Q Consensus 482 ~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~----~----~~~~~l---- 549 (732)
.++.|..++.+.+..+++.|..++++++.+.+++...++.+. ....+..+++. |. . ....+.
T Consensus 303 ----~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg-~VLlttelfqs-gd~c~~~~r~~p~e~e~~~~c 376 (528)
T KOG0253|consen 303 ----DSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYG-SVLLTTELFQS-GDACPLYNRFLPTELETRANC 376 (528)
T ss_pred ----hhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHhc-cCccccchhcchhHHHhhhcC
Confidence 000111122355778899999999999988888775444222 22222333322 21 0 001111
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHH
Q 004750 550 GISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCC 629 (732)
Q Consensus 550 ~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (732)
..+ ...-.....+.++...+|.++.++++||+|||+++..+++++.++.+.+..... .....++++. +-.
T Consensus 377 ~~s-~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~--------rn~~tvllf~-ara 446 (528)
T KOG0253|consen 377 PLS-VAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--------RNAYTVLLFT-ARA 446 (528)
T ss_pred Ccc-chhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--------cchhHHHHHH-HHH
Confidence 111 234556677889999999999999999999999999988887776665544211 1122222222 223
Q ss_pred HhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 630 FVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 630 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
|..+.....|+|.+|++|+..|+++.|.|+.+.++|+++.|.++ ...+.. ...+..+++++++++.+.+.++=-||||
T Consensus 447 fisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s-~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 447 FISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS-TSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred HHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc-eeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 33355567789999999999999999999999999999999999 444433 3457778888888888877765559999
Q ss_pred CCh
Q 004750 710 MPL 712 (732)
Q Consensus 710 ~~~ 712 (732)
|.+
T Consensus 525 R~l 527 (528)
T KOG0253|consen 525 RSL 527 (528)
T ss_pred CCC
Confidence 864
No 16
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.4e-30 Score=283.61 Aligned_cols=187 Identities=23% Similarity=0.281 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHH---HHHHHHHHHHHHhHHHhhhhhCChHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIV---AMSLIGATCITTCSGAIADWLGRRPMLIV 78 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~-~s~s~~gll~---Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLi 78 (732)
+++.+++.++++++++.+|...++.+.|.+.++++.+ .+..+.+... ++.+++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4556777888999999999999999999999998521 1444444444 44455555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHH
Q 004750 79 SSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYC 150 (732)
Q Consensus 79 gllL~aIgslL~a~a~s~~--------lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l 150 (732)
+.++++++++++++++++. .++++|+++|++.|+.++...+++.|++|+++||++.++.+.+..+|.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 68899999999999999999999999999999999999999998888888854
Q ss_pred HHHHHHh------hccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 151 MVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 151 ~~l~~~l------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
....... ....|||++|++.++++++.+ +....+||+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~ 223 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCch
Confidence 4322211 125699999999888777643 33445677653
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.6e-30 Score=275.34 Aligned_cols=171 Identities=16% Similarity=0.164 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 004750 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~ 94 (732)
+++..+|+..++.+.|.+.+++|. +..+.|++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 456778888999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004750 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (732)
Q Consensus 95 s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~ 174 (732)
+++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++ .......+..+||+.|.+.++++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGG--PLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHH--HHHHHHHHhCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999994 44454556679999999999888
Q ss_pred HHHHHHHHhhccCCc
Q 004750 175 LIYFVLTIFYLPESP 189 (732)
Q Consensus 175 ~i~~~l~~~~~~esp 189 (732)
++..++.+++.||+|
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 159 IIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHhhheecCCC
Confidence 877766666677765
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7e-30 Score=274.72 Aligned_cols=187 Identities=23% Similarity=0.287 Sum_probs=163.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
++.|....++++++++++++...++++.|.+.+++|+ +..+.|++.+++.++..++++++|.++||+|||++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3678888999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
+.+++++++.++++++.+++.|++.|++.+..++...+++.|++|+++|++++++.+.+..+|.++++............
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999995444333222223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
+||+.|.+.+++.++. ++....+||+|++
T Consensus 166 ~w~~~f~~~~~~~~~~-~~~~~~~~~~~~~ 194 (405)
T TIGR00891 166 GWRALFFISILPIIFA-LWLRKNIPEAEDW 194 (405)
T ss_pred cHHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 5999998876655553 3445667887643
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-31 Score=286.90 Aligned_cols=406 Identities=17% Similarity=0.197 Sum_probs=310.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
+.++-+.+.+++++...++.+-.++.+.|++.++.++ |.++.|++.+++.+.|.++-+++|.++||.+.|..+.++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 3577899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
+.++..++++++++.+.+.+..++.|+..|+-.|++...++.|+|+++||...+++++..++|..+.++.........+.
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996665446666677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhhhhhccc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPA 241 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (732)
+||..|++.++++++..++.++.++|+|+-. +-+ ++|+|.-|+.
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~---GLP---------------------------------~ie~~~~d~~ 226 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSE---GLP---------------------------------PIEEYRGDPL 226 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCC---------------------------------CHHHhhcCch
Confidence 9999999999999999999899999998421 100 0111110000
Q ss_pred cccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccccccccc
Q 004750 242 NDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMF 321 (732)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (732)
++
T Consensus 227 e~------------------------------------------------------------------------------ 228 (448)
T COG2271 227 EI------------------------------------------------------------------------------ 228 (448)
T ss_pred hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCccc
Q 004750 322 SVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGM 401 (732)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (732)
+ +||
T Consensus 229 ----------~-~~~----------------------------------------------------------------- 232 (448)
T COG2271 229 ----------Y-EEE----------------------------------------------------------------- 232 (448)
T ss_pred ----------h-hhh-----------------------------------------------------------------
Confidence 0 000
Q ss_pred ccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCC
Q 004750 402 GIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNP 481 (732)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~~ 481 (732)
T Consensus 233 -------------------------------------------------------------------------------- 232 (448)
T COG2271 233 -------------------------------------------------------------------------------- 232 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccCCCCcccccCCChhhhc-ccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHH
Q 004750 482 IGPAMIHPSETAAKGFSWKDLA-EPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLI 560 (732)
Q Consensus 482 ~~~~~~~~s~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 560 (732)
++.+..+.++++ +.-.+.+.++.+++........=++++.|.|.++.+ ..|++...+...+
T Consensus 233 ----------~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e--------~k~~s~~~a~~a~ 294 (448)
T COG2271 233 ----------KENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE--------VKGFSLVKANWAI 294 (448)
T ss_pred ----------ccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------hcCCCHHHHHHHH
Confidence 000001233333 333455666667766666666778999999999988 3455554444444
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc--cchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH-HHhhcccch
Q 004750 561 SGITTLLMLPSIAVAMRLMDIS--GRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC-CFVMGFGPI 637 (732)
Q Consensus 561 ~~i~~~~~l~~~~i~g~l~d~~--grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 637 (732)
..+-+++++|++++||++||+ |||..+.+...+.++..++ .++.. ..+... +..++++.. ++..+...+
T Consensus 295 -~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~---~~w~~---~~~~~~-l~~~~l~~iGf~IyGPqmL 366 (448)
T COG2271 295 -SLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLV---LYWLA---PNGSYL-LDAILLFIIGFLIYGPQML 366 (448)
T ss_pred -HHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHH---HHHcC---CCccHH-HHHHHHHHHHHHHhhHHHH
Confidence 468999999999999999995 7886554333222222222 12211 112222 223333333 333334445
Q ss_pred hhhhhccCCCccchhhHHHHHHHHHHH-HHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhcc
Q 004750 638 PNILCSEIFPTRVRGICIAICALVFWI-GDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi~~~~~~i-g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~ 705 (732)
....+.|..|++.-|++.|+...+.++ |+..+.+..|++.|..||.+.|.++.+.++++.++......
T Consensus 367 iGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 367 IGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 567788999999999999999999999 99999999999999999999999999888888777665554
No 20
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=8.1e-29 Score=280.36 Aligned_cols=185 Identities=17% Similarity=0.170 Sum_probs=171.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004750 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigl 80 (732)
|.+.|.+++.++++.++...|.+.++.++|.+.+++|. +..+.+|+.+.+.+++.++.+++|+++||+|||++++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 67889999999999999999999999999999999999 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004750 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 81 lL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~f-P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~ 159 (732)
+++++++++++++++++.++++|+++|++.+...+.....+.+++ |+++|++++++......+|.++| |..+..+.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~g--p~lgg~l~~ 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFG--PLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhc
Confidence 999999999999999999999999999999999998888887776 78999999999999999999999 666677778
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+|||.|++...++++.+++.++++|+.|
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 889999999998888887777778888764
No 21
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=6.5e-29 Score=270.78 Aligned_cols=182 Identities=19% Similarity=0.205 Sum_probs=157.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
++|..++.+.++.++.........+++|.+.+++|. +..+.|++.+++.+++.++++++|.++||+|||+++..+.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 456556666666666555545556678999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.+++++++.++++++.++++|++.|++.+..++...+++.|++|+++|++++++.+.+..+|.+++ +.....+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig--~~l~~~l~~~~g 161 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG--LPLGRVIGQYLG 161 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH--hhHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 444555566779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
||++|++.++++++..++.++++||.
T Consensus 162 w~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 162 WRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999998887666655556654
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1e-29 Score=269.33 Aligned_cols=178 Identities=20% Similarity=0.195 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~a 84 (732)
|.+++...+..+..+. ...+++.+|++.+++|+ +..+.|++.+++.+++.++++++|.++||+|||+++.++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~ 79 (377)
T TIGR00890 3 WYVLVGTVIMCFTSGY-VYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYG 79 (377)
T ss_pred EEEeHHHHHHHHHhhH-HhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHH
Confidence 4445555555555555 45678899999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 004750 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 85 IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr 164 (732)
++.++++++++++.++++|++.|++.+..++.....+.+++| ++|+++.++...+..+|.++++ +......+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 156 (377)
T TIGR00890 80 LGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILS--PLITSVINLEGVP 156 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHH--HHHHHHHhcccHH
Confidence 999999999999999999999999999998888889999998 6799999999999999988763 2333344566999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 004750 165 LMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 165 ~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+.|++.++++++..++.+++++++
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 157 AAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHheecC
Confidence 999999998888776666666654
No 23
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=3.9e-29 Score=278.59 Aligned_cols=185 Identities=21% Similarity=0.281 Sum_probs=149.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--CCCCchhHHHHHH-----HHHHHHHHHHHHhHHHhhhhhCChH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLY-IKREF--HLETEPTIEGLIV-----AMSLIGATCITTCSGAIADWLGRRP 74 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-I~~~l--gl~~s~s~~gll~-----Sl~~IG~~Ig~~~~g~LsDrfGrRk 74 (732)
+.+.+.+.++++++++++|...++.+.|. +.+++ +. ++. .+++. ++.+++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV--SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 44567788889999999999999988774 55665 55 444 45553 3455667889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHH
Q 004750 75 MLIVSSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMF 146 (732)
Q Consensus 75 vLLigllL~aIgslL~a~a~s~~--------lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ 146 (732)
+++++.++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999986 5888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004750 147 LAYCMVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 147 ig~l~~l~~~l------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
++......... ....+||++|++.+++.++. .+....+||+|+|
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~ 225 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 88544332211 12469999999888776553 3334557788754
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=6e-29 Score=277.65 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=155.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.|.++...++.......++..++..+|++.++ |+ +..+.|++.+++.++++++++++|+++||+|||++++++.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 356666777778888888888888899999988 99 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004750 83 YFIGGLVMLWSP----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 83 ~aIgslL~a~a~----s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~ 158 (732)
.+++++++++++ +++.+++.|++.|++.|..++.....+.+++|+++|++++++.+.+..+|..+++.+ ......
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l-~~~~~~ 181 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL-FLLGMA 181 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH-HHHHHH
Confidence 999998888753 678889999999999999988888899999999999999999999999886543222 111122
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...+||+.|++.++++++..++.++++||+|+
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 23499999999998888877777788888764
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=8.6e-29 Score=271.18 Aligned_cols=168 Identities=19% Similarity=0.146 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHH
Q 004750 19 GWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYV 98 (732)
Q Consensus 19 ~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~l 98 (732)
......+++++|.+.+++|+ +..+.|++.+.+.+++.++++++|+++||+|||+++..+.+....+.+.....++++.
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44556778899999999999 8999999999999999999999999999999998776555544444333333379999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004750 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 99 LiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
++++|++.|++.+.. +.....+.|++|+++|++++++.+.+..+|.++++ .....+.+..+||++|++.++++++..
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~--~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFAL--AAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 999999999999864 56666679999999999999999999999999994 444555667899999999999988888
Q ss_pred HHHHhhccCCchh
Q 004750 179 VLTIFYLPESPRW 191 (732)
Q Consensus 179 ~l~~~~~~esp~~ 191 (732)
++.++++||+|++
T Consensus 159 ~~~~~~lp~~p~~ 171 (368)
T TIGR00903 159 ILVLAALPALPFQ 171 (368)
T ss_pred HHHHHHcCCCCCC
Confidence 7788889998764
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.4e-28 Score=273.61 Aligned_cols=184 Identities=23% Similarity=0.343 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.|.....++++.++++++...+++.+|.+.+++|+ +..+.+++.+.+.+++.++.++.|+++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 356678888999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.+++++++.++++++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+|.+++ +.....+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~--~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVA--AQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999 444455566789
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
||+.|++..+..++ .++....+||++++
T Consensus 173 w~~~f~~~~~~~~~-~~~~~~~~p~~~~~ 200 (496)
T PRK03893 173 WRALFFIGILPIIF-ALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhCCCchhh
Confidence 99999875554443 33334456766543
No 27
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=3.2e-28 Score=267.12 Aligned_cols=166 Identities=17% Similarity=0.245 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~a 84 (732)
|.....++++.+...+. ..+++++|.+.+++|+ +..+.|++.+.+.+++.+++++.|+++||+|||++++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 44455555555554443 6678999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chh
Q 004750 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSW 163 (732)
Q Consensus 85 IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~-~~W 163 (732)
++.++++++++++.++++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+. ..+.+. .+|
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~--~~l~~~~~~w 162 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT--PWLVQHSETW 162 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCH
Confidence 999999999999999999999999999999999999999998 7899999999999989998885443 333444 389
Q ss_pred HHHHHHHHHHHHH
Q 004750 164 RLMLGVLFIPSLI 176 (732)
Q Consensus 164 r~~~~i~~~l~~i 176 (732)
|+.+.+.++..++
T Consensus 163 ~~~~~~~~~~~~~ 175 (393)
T PRK09705 163 YQTLAWWALPAVV 175 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 9988776665544
No 28
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.9e-28 Score=266.63 Aligned_cols=181 Identities=21% Similarity=0.276 Sum_probs=174.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
+..+..++.++++.|..+.....+.+++|.+.+|+|+ +....|++.|.|.+++.++.++...+.||+.||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 3567888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
++.++.+++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+.+++.++| ++++.++.+..
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~ 164 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLF 164 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 88888999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|||+.|++.+.++++.++..+..+|
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988888898
No 29
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=7.4e-31 Score=287.65 Aligned_cols=447 Identities=21% Similarity=0.226 Sum_probs=314.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC-----CchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFH-LE-----TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lg-l~-----~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkv 75 (732)
|+-...++++..+.+.++||..+++.+.|-+...|. -+ .++...+++..+..+|.++|++++|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 455677888999999999999999999988777652 22 245678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004750 76 LIVSSVLYFIGGLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 76 LLigllL~aIgslL~a~a~-------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig 148 (732)
+...++++.++++++++.. -..++.+.|+++|+|.|+-||+..+..+|....++||...+.......+|...|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999777631 246788889999999999999999999999999999999998888888887777
Q ss_pred HHHHHHHHhhc-------------cchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhccccc-HHHHHHHHHhhcCcCc
Q 004750 149 YCMVFGMSLMT-------------APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRM-LEAKKVLQSLRGREDV 214 (732)
Q Consensus 149 ~l~~l~~~l~~-------------~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~-~~~~~~~~~~~~~~~~ 214 (732)
.++.......- ..=||..|.+.+++.+..+. ..+.+|||++|-....+. +.+. ++.
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~~~~a~---~d~------ 266 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYTALVSKKLKQAA---GDM------ 266 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHHHHhhcCHhhhh---hcc------
Confidence 66655544220 12499999999998887654 467799998773111100 0000 000
Q ss_pred hhHHHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchh
Q 004750 215 AGEMALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVT 294 (732)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 294 (732)
++.+.+
T Consensus 267 ---------------------------------------~k~~~~----------------------------------- 272 (538)
T KOG0252|consen 267 ---------------------------------------KKVLSV----------------------------------- 272 (538)
T ss_pred ---------------------------------------cccccc-----------------------------------
Confidence 000000
Q ss_pred ccccccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccC
Q 004750 295 LFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDM 374 (732)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (732)
+.++| . +. +.+.
T Consensus 273 -------------------------------------~~~~~-----~------------------------~~--~~~~ 284 (538)
T KOG0252|consen 273 -------------------------------------DIEAE-----S------------------------TA--ESDV 284 (538)
T ss_pred -------------------------------------ccchh-----h------------------------cc--ccCC
Confidence 00000 0 00 0000
Q ss_pred CCCCCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccc
Q 004750 375 VPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVP 454 (732)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~ 454 (732)
.+|
T Consensus 285 ~~~----------------------------------------------------------------------------- 287 (538)
T KOG0252|consen 285 PPP----------------------------------------------------------------------------- 287 (538)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHH
Q 004750 455 VGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTP 534 (732)
Q Consensus 455 ~g~~~~~~~~l~~~~~~~~~~l~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 534 (732)
++....|..+|..+ .-+.+++.....+..-..++..+.+..
T Consensus 288 --------------------------------------~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s 328 (538)
T KOG0252|consen 288 --------------------------------------SNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQS 328 (538)
T ss_pred --------------------------------------ccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHH
Confidence 00011233333322 234455555555555557888999999
Q ss_pred HHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccch
Q 004750 535 QILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVV 614 (732)
Q Consensus 535 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 614 (732)
.+++..|+.+...+. ...-..+-....+...+.++|..+..+++|++|||++.+.++.++.+..+++...+.-..
T Consensus 329 ~I~~~ig~~~~~~~~-~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~---- 403 (538)
T KOG0252|consen 329 VIFSAIGVIPSANTY-HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE---- 403 (538)
T ss_pred HHHHhhccCCCcchH-HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc----
Confidence 999988766422222 011112333344556677788899999999999999999999999888887776433110
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH-----hhchhHHHHHH
Q 004750 615 HASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN-----SVGLAGVFGMY 689 (732)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~-----~~g~~~~f~~~ 689 (732)
.....+++..+..++..+|.+....++.+|+||+++|+++.|+..+++-+|++++...+.++.+ ..|.+.+|+++
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~ 483 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIIL 483 (538)
T ss_pred ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHH
Confidence 1111222333333444445666667888999999999999999999999999999999999999 78999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChhhhhhhhhcc
Q 004750 690 AVVCVISWIFVFIKVPETKGMPLEVITEFFAVG 722 (732)
Q Consensus 690 ~~~~~i~~~~~~~~~~et~~~~~~~~~~~~~~~ 722 (732)
+++++++.++ .+++||||++++|++++.....
T Consensus 484 ~~~~~~gi~~-T~l~pEtk~~~leei~~e~~~~ 515 (538)
T KOG0252|consen 484 AGCMLLGILF-TLLIPETKGKSLEEISNEEESN 515 (538)
T ss_pred HHHHHHhHhe-eEEeecccccCHHHhcChhhcc
Confidence 9999988655 4568899999999986655443
No 30
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.2e-28 Score=263.55 Aligned_cols=187 Identities=28% Similarity=0.370 Sum_probs=167.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.|.+++.+.+..+..+++....+..+|.+.+++|. +..+.|++.+.+.++..++.++.|+++||+|||+++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 456677777888889999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .....+.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~g 169 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGG--FLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHH--HHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999994 44455566779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchhhh
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLV 193 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~ 193 (732)
||+.|++.++++++..++.++++||+|++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLV 200 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHH
Confidence 9999999877777767677778899876543
No 31
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=9.7e-28 Score=266.34 Aligned_cols=167 Identities=23% Similarity=0.337 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHH-HHHHH-----HHHHHHHHHhHHHhhhhhCChHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGL-IVAMS-----LIGATCITTCSGAIADWLGRRPMLI 77 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gl-l~Sl~-----~IG~~Ig~~~~g~LsDrfGrRkvLL 77 (732)
++.....++++++++.+|+..++.+.|.+.++++. +..+.+. ..+.. .++..++++++|+++||+|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP--AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 56678899999999999999999999999999998 5555443 33322 2223468899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHH
Q 004750 78 VSSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAY 149 (732)
Q Consensus 78 igllL~aIgslL~a~a~s~~--------lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~ 149 (732)
.+++++++++++++++++++ .++++|+++|++.|...+....++.|++|+++|++++++.+.+..+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876 4688999999999999999999999999999999999999988888887775
Q ss_pred HHHHHHHh------hccchhHHHHHHHHH
Q 004750 150 CMVFGMSL------MTAPSWRLMLGVLFI 172 (732)
Q Consensus 150 l~~l~~~l------~~~~~Wr~~~~i~~~ 172 (732)
.+...... ....+||++|++..+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 44333211 246799999987544
No 32
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=5e-28 Score=268.97 Aligned_cols=183 Identities=14% Similarity=0.108 Sum_probs=155.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
++.++...++++.....++..+....|++.+ +|+ +..+.+++.+++.++..++++++|+++||+|||++++++.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 4667777778888888888888888888876 588 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004750 84 FIGGLVMLWS----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 84 aIgslL~a~a----~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~ 159 (732)
+++.+++.+. .+++.+.+.|++.|++.|..++.....+.|++|+++|++++++.+.+..+|..+++...... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~ 180 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAW 180 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHH
Confidence 9988887664 46778888999999999999998999999999999999999999999999998885433222 223
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+||+.|++.++++++..++.++++||+|+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 4589999999999888877777778888764
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=5.3e-27 Score=255.70 Aligned_cols=177 Identities=17% Similarity=0.251 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgs 87 (732)
+....++.++.+.....+.+.+|.+.+++|. +..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 3455667777788888888999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004750 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 88 lL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~ 167 (732)
++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..++ +.....+.+..+||+.|
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~gwr~~f 160 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLG--IPLGTYLSQEFSWRYTF 160 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHh--ccHHHHHhhhccHHHHH
Confidence 9999999999999999999999999989889999999999999999999999999999998 44455556677999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 004750 168 GVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~es 188 (732)
.+.++++++.+++.++++||.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 999988877666656667765
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=4.7e-27 Score=261.32 Aligned_cols=180 Identities=21% Similarity=0.349 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004750 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aI 85 (732)
.+++.+.++.++..++....++++|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 79 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTL 79 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 356677889999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004750 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 86 gslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~ 165 (732)
+.++++++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +.....+.+..+||+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g--~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALG--PTLGGWIIENYHWRW 157 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhh--hccHhHhccCcCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999 455566667789999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCc
Q 004750 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|++.++++++..++.++++||++
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhhHHHHHHHHHHHHHcCCcc
Confidence 999998888877777777777653
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=1.9e-28 Score=259.74 Aligned_cols=174 Identities=21% Similarity=0.187 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh
Q 004750 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~ 92 (732)
+++++..+++..++.++|.+.+++|+ +..+.|++.+++.++..++++++|+++||+|||++++++.++.+++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004750 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 93 a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.. .........+||+.|++.++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPL-VLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHH-HHHHHHhcCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999521 22334456799999999988
Q ss_pred HHHHHHHHHHhhccCCc
Q 004750 173 PSLIYFVLTIFYLPESP 189 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp 189 (732)
++++..++.+++.+|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHheeeCCCc
Confidence 88777766677777765
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=7.8e-28 Score=268.57 Aligned_cols=185 Identities=16% Similarity=0.235 Sum_probs=164.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HhCCCCchhHHHHHHHHHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKR----------------------EFHLETEPTIEGLIVAMSLIGATCI 59 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~----------------------~lgl~~s~s~~gll~Sl~~IG~~Ig 59 (732)
+.+|.++.+++++..+...|+..++.+.+.+.+ ++++ +..+.|++.+.+.+++.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQIII 92 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHHH
Confidence 457889999999999999999999999888876 7788 8999999999999999999
Q ss_pred HHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHH
Q 004750 60 TTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP 137 (732)
Q Consensus 60 ~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a--~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~ 137 (732)
++++|+++||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+..++....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999988887554 56788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 138 QFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 138 ~~~~~~G~~ig~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+..+|.++++ .....+.+. .+||+.|++.++++++..++.+++.+|+|+
T Consensus 173 ~~~~~~g~~i~~--~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 173 TSGFQLGTFIFL--PISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHH--HHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999994 444455566 499999999999888877766666777764
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=5.6e-26 Score=249.93 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=158.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
|+.|..++.+.+..++.........+.+|.+.+++|. ++++.|+..+++.++..+++++.|.++||+|||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 3456666666666666666655666778999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
+.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.++|.+++ +.....+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig--~~l~~~l~~~~ 171 (394)
T PRK10213 94 LLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA--APLGSFLGELI 171 (394)
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 55566666778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+||+.|++.++++++..++.+..+||+
T Consensus 172 gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 172 GWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999998887776554444445654
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=4.3e-26 Score=249.65 Aligned_cols=184 Identities=18% Similarity=0.258 Sum_probs=162.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
++.++..+.+.+..++..+....+.+.+|.+.+++|. +..+.++..+.+.+++.+++++.|.++||+|||++++++.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 3567788888888888899999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
+.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++ +.......+..
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~ 164 (406)
T PRK15402 87 FFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG--PLVGAALIHVL 164 (406)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcc
Confidence 9999999999999999999999999999999889999999999999999999999888888888888 44444455667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+||+.|++.++++++.++..++.+||++
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999988888776665556667653
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=2.6e-26 Score=250.16 Aligned_cols=168 Identities=15% Similarity=0.187 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
..-+..+.+..++..++.....+++|. +.+++|. +..+.|++.+++.+++.++++++|+++||+|||++++++.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 345556777888888888888888886 6789999 8999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhh--------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 84 FIGGLVMLWS--------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 84 aIgslL~a~a--------~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
+++.+++.++ .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g--~~l~~ 169 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG--APLGV 169 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH--HHHHH
Confidence 8776665443 2567899999999999999999999999999999999999999999999999998 55555
Q ss_pred HhhccchhHHHHHHHHHHHHH
Q 004750 156 SLMTAPSWRLMLGVLFIPSLI 176 (732)
Q Consensus 156 ~l~~~~~Wr~~~~i~~~l~~i 176 (732)
.+....+||+.+++..+++++
T Consensus 170 ~l~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 170 LLYHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HHHHcccHHHHHHHHHHHHHH
Confidence 556677999998876665544
No 40
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=1.7e-25 Score=249.61 Aligned_cols=178 Identities=22% Similarity=0.337 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
..++++++.++..++...+++.+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 45667788899999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004750 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 87 slL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~ 166 (732)
.+++.++++++.++++|+++|++.+...+...+++.|++|+++|+.+.++......+|.+++ +.....+.+..+||+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~~~g~l~~~~gw~~~ 166 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG--PALGGLLVEYASWHWI 166 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHhhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 5555566667799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCC
Q 004750 167 LGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~es 188 (732)
|.+...++++..++.....|+.
T Consensus 167 f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 9998888777666666666654
No 41
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=2.3e-26 Score=251.73 Aligned_cols=175 Identities=11% Similarity=0.081 Sum_probs=154.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+++...+.++++.++.+.+...++..+|.+.+++|+ +.++.+++.+.+.+++.++++++|+++||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 456667778889999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.|...+....++.|++|+++|+.++++.+....+|..+++.... .......+
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~-~l~~~~~g 160 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAA-YLLARSIE 160 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999988888888888854332 22234569
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 004750 163 WRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l 180 (732)
||+.|.+.+++.++.+++
T Consensus 161 w~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 161 WYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988877765543
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=2.1e-26 Score=253.28 Aligned_cols=384 Identities=15% Similarity=0.079 Sum_probs=272.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a 91 (732)
.++.++..+......+.+|.+.++++. +..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.++..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHH
Confidence 334555666667778888999999998 889999999999999999999999999999999999988887777666544
Q ss_pred h-----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004750 92 W-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 92 ~-----a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~ 166 (732)
+ .++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|.++| +.....+.+..+|++.
T Consensus 101 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~g~l~~~~~~~~~ 178 (417)
T PRK10489 101 LNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS--PALGGLLIAAGGVAWN 178 (417)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH--HHHHHHHHHHHhhHHH
Confidence 2 56788999999999999999889999999999999999999999999999999999 4445555556689999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhhhhhcccccccc
Q 004750 167 LGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAA 246 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (732)
|++.++..++..+ ..+.+|++|+.. +. .+... .
T Consensus 179 ~~~~~~~~~~~~~-~~~~l~~~~~~~----~~------------~~~~~---~--------------------------- 211 (417)
T PRK10489 179 YGLAAAGTFITLL-PLLRLPALPPPP----QP------------REHPL---R--------------------------- 211 (417)
T ss_pred HHHHHHHHHHHHH-HHHhCCCCCCCC----cc------------cccch---H---------------------------
Confidence 9888777665443 345566543210 00 00000 0
Q ss_pred ccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccccccccccCCC
Q 004750 247 DQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGN 326 (732)
Q Consensus 247 ~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (732)
T Consensus 212 -------------------------------------------------------------------------------- 211 (417)
T PRK10489 212 -------------------------------------------------------------------------------- 211 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCcccccCCc
Q 004750 327 QPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGG 406 (732)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (732)
+
T Consensus 212 ---------~---------------------------------------------------------------------- 212 (417)
T PRK10489 212 ---------S---------------------------------------------------------------------- 212 (417)
T ss_pred ---------H----------------------------------------------------------------------
Confidence 0
Q ss_pred ccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCCCCccc
Q 004750 407 WQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAM 486 (732)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~~~~~~~ 486 (732)
T Consensus 213 -------------------------------------------------------------------------------- 212 (417)
T PRK10489 213 -------------------------------------------------------------------------------- 212 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHH
Q 004750 487 IHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTL 566 (732)
Q Consensus 487 ~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~ 566 (732)
.+..++.+++++..+..++..++.. ....+..+.|.++++ .+|.++.. ..++..+..+
T Consensus 213 --------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~--------~~g~~~~~-~g~~~~~~~~ 270 (417)
T PRK10489 213 --------LLAGFRFLLASPVVGGIALLGGLLT-----MASAVRVLYPALADE--------VWQMGAAQ-IGLLYAAVPL 270 (417)
T ss_pred --------HHHHHHHHHcChHHHHHHHHHHHHH-----HHHhHHHhhHHHHHh--------ccCCChhH-hHHHHHHHHH
Confidence 0001111222222222222211111 123456677888876 23444434 4444556788
Q ss_pred HHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc-cchhhhhhccC
Q 004750 567 LMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF-GPIPNILCSEI 645 (732)
Q Consensus 567 ~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~ 645 (732)
+.+++.++.+++.||.++++.+..+..+..++++.+.+. .+.+. ..+..+..+++.+. .+....++.|.
T Consensus 271 g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (417)
T PRK10489 271 GAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--------PMWIL--AVLCLALFGYLSAISSLLQYTLLQTQ 340 (417)
T ss_pred HHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--------chHHH--HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999877777776666555554443321 01112 22222222333333 23445778999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChhhhhh
Q 004750 646 FPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITE 717 (732)
Q Consensus 646 ~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~~~~~~~ 717 (732)
+|++.|+++.|+++....+|..+++.+.|++.+..|+...++.++++.++..++....+|++|+++.|++++
T Consensus 341 ~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 341 TPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred CCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 999999999999999999999999999999999999998999888888888788888899999998887754
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=9.9e-26 Score=241.75 Aligned_cols=179 Identities=19% Similarity=0.298 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
.+..+.+..++.......+.+.+|.+.+++|. +..+.|++.+.+.++..++++++|+++||+|||+++.++.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 33444444566777888888999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004750 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 87 slL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~ 166 (732)
.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++ .......+..+||++
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~--~~~~~l~~~~~~~~~ 161 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAP--LLGGYILVWLSWHAI 161 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999994 444455566799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCc
Q 004750 167 LGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~esp 189 (732)
|++.++++++..++.+++.||++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988888777766666677653
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=7.4e-26 Score=239.20 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~ 90 (732)
+.++.++..+......+.+|.+..+++. +..+.|++.+++.++..++++++|.++||+|||++++++.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 4466677777778888889999999998 89999999999999999999999999999999999999999999988888
Q ss_pred Hhhh-----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004750 91 LWSP-----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 91 a~a~-----s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~ 165 (732)
.+.+ +++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +.....+.+..+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVG--PGIGGLMYATLGIKW 159 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHH--HHHHHHHHHHhhHHH
Confidence 8877 999999999999999999999999999999999999999999999999999999 444555556679999
Q ss_pred HHHHHHHHHHHHHHH
Q 004750 166 MLGVLFIPSLIYFVL 180 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l 180 (732)
.|++.++..++..++
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 160 AIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998887766654443
No 45
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=4.2e-26 Score=257.47 Aligned_cols=182 Identities=16% Similarity=0.095 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~a 84 (732)
+..+....+..++..++...+.+.+|.+.+++|+ +..+.+++.+.+.+++.++++++|+++||+|||+++.++.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4455555566777777777888899999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhc---
Q 004750 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LMT--- 159 (732)
Q Consensus 85 IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~--l~~--- 159 (732)
++.++++++++++.++++|++.|++.+... ....++.|++|+++||+++++...+..+|..+++....... ...
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999988754 45678999999999999999998777777777644332211 111
Q ss_pred --cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 160 --APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 --~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+||++|++.++++++..++.+++.++.|
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 248999999999988877666555444443
No 46
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=1e-25 Score=245.24 Aligned_cols=165 Identities=15% Similarity=0.178 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aI 85 (732)
.++.+.++.++.........+.+|. +.+++|+ |..+.|++.+++.+++.++++++|+++||+|||++++++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence 4445556666667777777788885 6789999 899999999999999999999999999999999999999888776
Q ss_pred HHHHHHh--------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 004750 86 GGLVMLW--------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (732)
Q Consensus 86 gslL~a~--------a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l 157 (732)
+.+.+.. .++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+...|.+++ +.....+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g--~~~~~~l 171 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG--APLGLLL 171 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH--HHHHHHH
Confidence 6543322 35788999999999999999999999999999999999999999999999999999 4445555
Q ss_pred hccchhHHHHHHHHHHHH
Q 004750 158 MTAPSWRLMLGVLFIPSL 175 (732)
Q Consensus 158 ~~~~~Wr~~~~i~~~l~~ 175 (732)
....+||+.+.+..++.+
T Consensus 172 ~~~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 172 HSHFGFAALALTTMVLPL 189 (392)
T ss_pred HhccChHHHHHHHHHHHH
Confidence 566799988776554433
No 47
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.3e-25 Score=240.48 Aligned_cols=173 Identities=18% Similarity=0.227 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHH-HHHHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIV-SSVLYFIGGLVM 90 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLi-gllL~aIgslL~ 90 (732)
+.+++.++......+.+|. +.+++|. +..+.|++.+++.++..+.++++|.++||+|||+.+++ +.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 4577778888888888885 6788999 89999999999999999999999999999999887654 556666777888
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhh--hhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLL--NTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~--~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~ 168 (732)
+++++++.+++.|++.|.+.+...|...+++.|+.|++.|+.. .++...+.++|.+++ +.....+.+..+||+.|+
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig--~~~~~~l~~~~~~~~~f~ 159 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIG--PPLAFWLALGFGFTVMFL 159 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHh--hhHHHHHHHhcccHHHHH
Confidence 8899999999999999988888888888999999987777654 577788888999999 444555566679999999
Q ss_pred HHHHHHHHHHHHHHhhccCCc
Q 004750 169 VLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 169 i~~~l~~i~~~l~~~~~~esp 189 (732)
+.++++++..++.++++||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 160 TAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 999988877776667788865
No 48
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.3e-26 Score=261.16 Aligned_cols=165 Identities=32% Similarity=0.515 Sum_probs=145.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al 120 (732)
+.....+..+++.+|.++|.+++|.++||+|||+++++++++.+++.+++++++|++.+++.|++.|++.++...+...+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHH
Q 004750 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE 200 (732)
Q Consensus 121 IaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~ 200 (732)
++|++++++|+.+.++ ......|..++ ++....+.. +||+.+++..+++++.+++ +++.||||||+..+++.++
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~--~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLML--PAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHH--HHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHH
Confidence 9999999999999999 55555555555 333333222 9999999999999987665 6667799999999999999
Q ss_pred HHHHHHHhhcC
Q 004750 201 AKKVLQSLRGR 211 (732)
Q Consensus 201 ~~~~~~~~~~~ 211 (732)
+.+.+++..+.
T Consensus 270 a~~~l~~~a~~ 280 (521)
T KOG0255|consen 270 AIKILKKIAKL 280 (521)
T ss_pred HHHHHHHHHhh
Confidence 99888887654
No 49
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=2.7e-25 Score=241.98 Aligned_cols=149 Identities=17% Similarity=0.145 Sum_probs=136.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004750 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigl 80 (732)
|++.-.-+..+.++.++.+...+.+++.+|.+.+++|. +..+.|++.+.+.+++.++++++|+++||+|||+++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~ 78 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS 78 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44444446667788888999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004750 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 81 lL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~ 151 (732)
++.+++.++++++++++.++++|++.|++.+...+...+.+.+..++++|++++++.+.+..+|..+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 149 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLL 149 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999989888888899999999999999999999999999444
No 50
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=3.4e-25 Score=240.66 Aligned_cols=175 Identities=21% Similarity=0.241 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh-----HHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPT-----IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s-----~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
..+.++.++.++......+.+|.+.+++|. +.. ..|++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGV--TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 344667788888888888999999999998 433 3589999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 004750 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (732)
Q Consensus 84 aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~W 163 (732)
+++.+++.++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++......+|.++++ .....+.+..+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~ 171 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP--LAGGLLADSYGL 171 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCH
Confidence 9999998889999999999999999865 4577788899999999999999999999999999994 444555566799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 164 RLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 164 r~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|+.|++.+++.++..++.+++++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999988877776666667765
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=3.2e-26 Score=256.79 Aligned_cols=179 Identities=18% Similarity=0.116 Sum_probs=151.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.|.+++.++++......+...++..+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 357777777777766555666678889999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHH-HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 83 YFIGGLVMLWSPNVYVLLL-ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI-~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
.++++++++++++++.+++ .|++.|++.+...+...+++.++++ ++|++++++.+.+..+|..++ +.....+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~--~~l~~~l~~~~ 170 (455)
T TIGR00892 94 ASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTL--APLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHH--HHHHHHHHHHh
Confidence 9999999999999988865 4799999999877777888899996 789999999999999999998 44555556677
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|||+.|++.++++++..++.+++.+
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999887765554444443
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=5.6e-25 Score=241.69 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
......++.++...........++.+.+++|. +..+.|++.+.+.+++.++++++|+++||+|||+++..+.++.+++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 14 NLLWGYIGVVVFMTGDGLEQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred hhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 33444555555555544455566777789999 8999999999999999999999999999999999999999999888
Q ss_pred HHHHH---h-hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHH-HHHHHHHHHHHhhccc
Q 004750 87 GLVML---W-SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGM-FLAYCMVFGMSLMTAP 161 (732)
Q Consensus 87 slL~a---~-a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~-~ig~l~~l~~~l~~~~ 161 (732)
++++. . .++++.+++.|++.|++.+...+...+.+.+++|+++|++++++.+.+.++|. +++ +.....+.+..
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g--~~~~~~l~~~~ 169 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG--SYYSSYAIPAF 169 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccccc
Confidence 76553 3 35788889999999999988888888899999999999999999999999997 466 33344445556
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccC
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
||+..++......++..++.+++.++
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 170 GEMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCC
Confidence 76655554443333333333344443
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=2e-25 Score=233.35 Aligned_cols=346 Identities=25% Similarity=0.362 Sum_probs=275.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
.+.++.++..++.....+.+|.+.++++. +..+.+++.+...++..++++++|+++||+|||+.+.++.++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 45667788888888999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004750 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i 169 (732)
+.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++ .......+..+||+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~ 158 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGP--LLGGLLAESLGWRWLFLI 158 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999994 444555566689999999
Q ss_pred HHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhhhhhccccccccccc
Q 004750 170 LFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAADQD 249 (732)
Q Consensus 170 ~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (732)
.+++.++..++.. +++ +.
T Consensus 159 ~~~~~~~~~~~~~-~~~------------------------~~------------------------------------- 176 (352)
T cd06174 159 LAILGLLLALLLL-FLL------------------------RL------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHHHH-HHH------------------------HH-------------------------------------
Confidence 8888777655433 222 00
Q ss_pred cchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccccccccccCCCCCC
Q 004750 250 ISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPR 329 (732)
Q Consensus 250 ~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCcccccCCcccc
Q 004750 330 NEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQL 409 (732)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCC
Q 004750 410 AWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHP 489 (732)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~~~~~~~~~~ 489 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHH
Q 004750 490 SETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLML 569 (732)
Q Consensus 490 s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l 569 (732)
.+...+.. +......+....+.|.++++. ++.+. ........+..++.+
T Consensus 177 ------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~ 225 (352)
T cd06174 177 ------------------LLLLALAF----FLLSFGYYGLLTYLPLYLQEV--------LGLSA-AEAGLLLSLFGLGGI 225 (352)
T ss_pred ------------------HHHHHHHH----HHHHhHHHHHHHHHHHHHHHh--------cCCCH-HHHHHHHHHHHHHHH
Confidence 00111111 122223456677888888763 23344 344555667889999
Q ss_pred HHHHHHhhhhhcccchh-HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCc
Q 004750 570 PSIAVAMRLMDISGRRT-LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPT 648 (732)
Q Consensus 570 ~~~~i~g~l~d~~grr~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 648 (732)
++.++.+++.||+|||+ .+..+..+..++.+.+.... +.+...+..++...+.+ ...+....+..|..|+
T Consensus 226 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 296 (352)
T cd06174 226 LGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--------SLALLLVALLLLGFGLG-FAFPALLTLASELAPP 296 (352)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHh-ccchhHHHHHHhhcCH
Confidence 99999999999999999 88888877777776665521 12222233333333333 3456667888999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Q 004750 649 RVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVF 701 (732)
Q Consensus 649 ~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~ 701 (732)
+.|++..|+.+....++..+++.+.+.+.+..+++..|.+.+++++++.++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 297 EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999998888876654
No 54
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=8.7e-26 Score=240.70 Aligned_cols=174 Identities=26% Similarity=0.386 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHH-----HHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAM-----SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl-----~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
.+.+.+|+..++...+++.+++..+.++.+.+++.+. ..++..+++++.|+++||+|||++++++.++.+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4678899999999999988886532245566665543 23333568899999999999999999999999999999
Q ss_pred HHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----
Q 004750 90 MLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL---- 157 (732)
Q Consensus 90 ~a~a~s~~--------lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l---- 157 (732)
+++++++. .+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|.++++........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99988865 478889999999999999999999999999999999999999999999999655433221
Q ss_pred --hccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 158 --MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 158 --~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
....+||+.|.+.+++.++.. +....+||+|
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ 194 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETP 194 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Confidence 135689999988777665533 3334456654
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=6.6e-26 Score=238.85 Aligned_cols=174 Identities=30% Similarity=0.520 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~ 90 (732)
+++.++..+....+.+.+| .+.+++|. +..+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 5677888888888999999 89999999 89999999999999999999999999999999999999999999996666
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+....+|.+++ +.....+.+..+||+.|++.
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~~~~~~~~~~ 157 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILG--PLLGGFLISYFGWRWAFLIS 157 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCCHCHHCCHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcc--cchhhhhhhccccccccccc
Confidence 6768888999999999999999999999999999999999999999999999999999 56666666778999999999
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 004750 171 FIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~esp 189 (732)
++++++.+++..++++++|
T Consensus 158 ~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 158 AILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHCCC---S
T ss_pred cchhhhhhhhHhhhhhhcc
Confidence 9999988776556666543
No 56
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1.4e-24 Score=244.63 Aligned_cols=181 Identities=12% Similarity=0.034 Sum_probs=152.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~-~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
+..+.+..++.++..+....++++.+.+.+ ++|+ +.++.+++.+++.+++.+++++.|++.||+|.|+++.++.+++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 346677778888888888899999998877 8999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--
Q 004750 84 FIGGLVMLWS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-- 156 (732)
Q Consensus 84 aIgslL~a~a-----~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~-- 156 (732)
++.+++++++ ++++.+++.|++.|++ |..++.....+++|+|+++||+++++....+++|..++++......
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999987 8999999999999998 7788999999999999999999999997777777776654332211
Q ss_pred -hh-------------ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 157 -LM-------------TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 157 -l~-------------~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+. ...+||.++++..++.++..++.++++++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 10 134689999888888887776666665553
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=2.7e-24 Score=234.11 Aligned_cols=173 Identities=21% Similarity=0.288 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a 91 (732)
.+..++.........+++|.+.+++|. +..+.++..+.+.++..+++++.|+++||+|||++++++.++.+++.+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 333444444555566789999999999 899999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004750 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++ .......+..+||+.|++.+
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAP--VLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCcChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999988884 44444455679999999999
Q ss_pred HHHHHHHHHHHhhccCC
Q 004750 172 IPSLIYFVLTIFYLPES 188 (732)
Q Consensus 172 ~l~~i~~~l~~~~~~es 188 (732)
+++++..++.++++||+
T Consensus 165 ~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 165 AMGILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 88887777767777775
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=4.2e-24 Score=230.04 Aligned_cols=165 Identities=18% Similarity=0.324 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004750 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (732)
Q Consensus 20 ~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lL 99 (732)
+......+.+|.+.+++|+ +..+.+++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 3445667889999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 100 iI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .....+.+..+||+.|++.++++++..+
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAP--IIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 4445555667999999999888887776
Q ss_pred HHHhhccCC
Q 004750 180 LTIFYLPES 188 (732)
Q Consensus 180 l~~~~~~es 188 (732)
+..+++||+
T Consensus 161 ~~~~~~~~~ 169 (377)
T PRK11102 161 LVFFFIPET 169 (377)
T ss_pred HHHHhCCcc
Confidence 666777765
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=1.7e-23 Score=231.83 Aligned_cols=180 Identities=19% Similarity=0.350 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004750 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aI 85 (732)
.+...+.+..++.........+.+|.+.++++. +..+.++..+++.+++.++++++|+++||+|||++++.+.+++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 16 FFPMALILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 344555666677777888889999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004750 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 86 gslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~ 165 (732)
+++++.++++++.++++|+++|++.+...+...+++.|++|+++|++++++......+|.+++ +..+..+.+..+||+
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~lg~~l~~~~gw~~ 171 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG--PLSGAALMHFVHWKV 171 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcCHHH
Confidence 999999999999999999999999987777788899999999999999999999999999999 444455556679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCc
Q 004750 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|++.+++.++.+++.++++||++
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999888877666566688764
No 60
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2.4e-23 Score=227.30 Aligned_cols=176 Identities=20% Similarity=0.272 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgs 87 (732)
++.+.+..++..+....+.+.+|.+.+++|. +..+.|++.+++.+++.++++++|+++||+|||+++..+.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 3333434455556677778888999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004750 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 88 lL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~ 167 (732)
+++.++++++.+++.|++.|++.+...+...+++.|++|+++++...+.......+|.+++ +.......+..+||+.|
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~g~~~~~ 163 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALA--PLLGAWLLNHFGWQAIF 163 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCChHHHH
Confidence 9999999999999999999999988888888999999999999999988888888888888 44445556667999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 004750 168 GVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~es 188 (732)
++.+++.++..++. ++++|+
T Consensus 164 ~~~~~~~~~~~~~~-~~~~~~ 183 (401)
T PRK11043 164 ATLFAITLLLILPT-LRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHH-HHcCCC
Confidence 99888877765543 344543
No 61
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=1.7e-23 Score=229.28 Aligned_cols=177 Identities=18% Similarity=0.217 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHH-HHHHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPML-IVSSVLYF 84 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~I-G~~Ig~~~~g~LsDrfGrRkvL-LigllL~a 84 (732)
.....++.++.+.....+.+.+|. +.+++|+ +.++.|++.+...+ ++.++.+++++ +||+|||+.+ +.+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHH
Confidence 344555677777777777777765 6788999 89999999876655 55555655555 9999999875 45566666
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchh--hhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 85 IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~R--G~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
++.++.+++++++.+++.+.+.|...+...+...+++.++.+++.| +..+++.+.+.++|.+++ +.....+.+..|
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g--~~i~~~l~~~~g 171 (393)
T PRK15011 94 LACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIG--PPLAYALAMGFS 171 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHh--hHHHHHHHHhcC
Confidence 7777788889998887766655555567778888888898876655 455678888999999999 555666666779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
||+.|++.++++++..++.++++||.|
T Consensus 172 w~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 172 FTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 999999999888887776677788763
No 62
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=3.3e-23 Score=235.19 Aligned_cols=175 Identities=14% Similarity=0.140 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChHH-HHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSV 81 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-----GrRkv-LLigll 81 (732)
...+++..+.+|......++.+|...++.|. +..++|.+ +.....+ ++.+++|.++||+ |||+. ++++.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3445566667888888899999999999999 88898887 4444444 6899999999999 99885 667777
Q ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004750 82 LYFIGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 82 L~aIgslL~a~a---~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~ 158 (732)
+.+++.+++++. .+++.+.+.+++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++ .....+.
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~--~l~~~l~ 167 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG--GLALWLA 167 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 777777777664 46888999999999999999999999999999999999999999999999999994 4444445
Q ss_pred c-cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 159 T-APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 159 ~-~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+ ..|||.+|++.+++.++..+. .+++||++
T Consensus 168 ~~~~GWr~~f~i~a~l~ll~~l~-~~~~~e~~ 198 (491)
T PRK11010 168 DRYLGWQGMYWLMAALLIPCIIA-TLLAPEPT 198 (491)
T ss_pred hcccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 5 469999999999887776544 34577764
No 63
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1.9e-23 Score=229.99 Aligned_cols=172 Identities=15% Similarity=0.188 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~ 90 (732)
.++.++....+....+.+| ++.+++|+ +..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3455556666666666555 66788999 99999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.++++++.++++|++.|.+.+...++..++..|.+|+++|+++.++.....++|.++++.. ...+.. .+|+..|.+.
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l--~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPL--GTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-hccCcHHHHH
Confidence 9999999999999999988888888899999999999999999999999999999999544 444333 5899999988
Q ss_pred HHHHHHHHHHHHhhccCC
Q 004750 171 FIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~es 188 (732)
++++++..++..+++|+.
T Consensus 168 ~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 888777655555556654
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=1.1e-22 Score=221.75 Aligned_cols=183 Identities=19% Similarity=0.249 Sum_probs=159.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.+..+.++.+...+..+......+.+|.+.+++|. ++.+.+++.+++.+++.++++++|+++||+|||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 455566666666667777777888889999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.+...+....++.|++++++|++++++.+.+..+|..++ +.......+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~g 160 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA--PLIGGLLTTLFG 160 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhccC
Confidence 999999999999999999999999999998888888899999999999999999999999999998 444455556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
||+.|++.++++++..++..+++||+|
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999988877776665566777764
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.2e-22 Score=223.86 Aligned_cols=171 Identities=18% Similarity=0.261 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~ 90 (732)
.++.++.......+.+.++ ++.+++|+ +..+.|++.+...++..+..+++|+++||+|||+++.++.++.+++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555 57789999 99999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+|+ .....+. ..+||+.|++.
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~--~l~g~l~-~~g~~~~f~~~ 170 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGA--LLGSWLL-QYDFRLVCATG 170 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HhhHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999994 4444444 56999999998
Q ss_pred HHHHHHHHHHHHhhccC
Q 004750 171 FIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~e 187 (732)
++++++..++..+++||
T Consensus 171 ~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 88777665554555554
No 66
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=1.3e-22 Score=227.13 Aligned_cols=147 Identities=17% Similarity=0.140 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
....++.+++.+++.++.+...++.+|.+++++|+ ++.+.|++.+.+.+++.+++++.|.++||+|||+++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 44555667777888899999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 84 FIGGLVM---LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 84 aIgslL~---a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
+++++++ .++++++.++++|+++|++.|...+....++.|+.|+++|...+++.+.++++|..+++++.
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 46789999999999999999999999999999998888887789999999999999996554
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=2e-22 Score=221.79 Aligned_cols=171 Identities=19% Similarity=0.217 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
...++.++..+....+...++.+.++++. +..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.++++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 34566677676555556666777889998 8889999999999999999999999999999999999999999998888
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004750 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i 169 (732)
+.++++. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++| |..++.+.+. .|+..+.+
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~G--p~lgG~l~~~-~~~~~~~i 158 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLG--TVLGGALADP-HAEAALAV 158 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH-HHHHHHHH
Confidence 7776664 6789999999999999999999999999999999999999999999999 4444544443 47877777
Q ss_pred HHHHHHHHHHHHHhhccCCc
Q 004750 170 LFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 170 ~~~l~~i~~~l~~~~~~esp 189 (732)
.+.+.++. .+..+++||+|
T Consensus 159 ~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 159 CALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHH-HHHHhcCCCCc
Confidence 66554443 34456778764
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=1.6e-22 Score=224.55 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgs 87 (732)
++.+++..++.|+.....++.+|.+++++|+ +..+.|++.+.+.+++.+++++.|++.||+|||+++++++++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4566777888899989999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred HHHHh---hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh------
Q 004750 88 LVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM------ 158 (732)
Q Consensus 88 lL~a~---a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~------ 158 (732)
+++.. .++++.+++.|++.|++.|...+....++.+..|+++|++.+++.+.+.++|..+++.........
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 358999999999999999999999999999999999999999999999999999996554433221
Q ss_pred ------------------ccchhHHHHHHHHHHHHHHHHH
Q 004750 159 ------------------TAPSWRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 159 ------------------~~~~Wr~~~~i~~~l~~i~~~l 180 (732)
+..+||++|.+.+++.++..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1246999999998877765543
No 69
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.1e-23 Score=230.48 Aligned_cols=384 Identities=20% Similarity=0.218 Sum_probs=291.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
.....+++..+...+..+....++++.+.|.+++++ |+.|.+++.++..+..++..++.|.+.||||.|++..++.++
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 345566677777777777788889999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhh---HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004750 83 YFIGGLVMLWSPN---VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 83 ~aIgslL~a~a~s---~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~ 159 (732)
..+.++..+++.+ ++++++.+++.|++ |..+.+...+++.|+|++++|.++++.. .+++|..+.++..... ..
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v--~~ 164 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV--AV 164 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH--HH
Confidence 9999999998754 45999999999997 4555888899999999999999999999 8899999886655433 33
Q ss_pred cch---hHHHHHHHHHHHHHHHHHHHhhccCCchhhhcccccHHHHHHHHHhhcCcCchhHHHHHHhhhccccccchhhh
Q 004750 160 APS---WRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEY 236 (732)
Q Consensus 160 ~~~---Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (732)
..+ ||.+..+..++.++..++.++++.|.|....+.+....
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------------------------------------ 208 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------------------------------------ 208 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch------------------------------------
Confidence 446 99999999998888888888888877632000000000
Q ss_pred hhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccc
Q 004750 237 IIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPH 316 (732)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCC
Q 004750 317 FGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAG 396 (732)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhh
Q 004750 397 EPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKEL 476 (732)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l 476 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhH
Q 004750 477 LDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASA 556 (732)
Q Consensus 477 ~~e~~~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~ 556 (732)
..++.+++ ++-.+.+.+.++..+.++.++..++|.++++ ++|++...+
T Consensus 209 --------------------~~~~~v~~----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~--------~fg~~~~~A 256 (417)
T COG2223 209 --------------------AQLKAVFS----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT--------QFGLSPVTA 256 (417)
T ss_pred --------------------hHHHHHhc----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCCChhhH
Confidence 00111111 1112334445556677888999999999987 677887554
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccc
Q 004750 557 SLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGP 636 (732)
Q Consensus 557 ~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (732)
+ .+.....+.+.+.++++|+++||+|.++.++..+.++.++..++.+...... ........+...+....+.+++.++
T Consensus 257 g-~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~l~l~~~~G~GnGs 334 (417)
T COG2223 257 G-LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG-HGGSFVVFVAVFLALFVFAGLGNGS 334 (417)
T ss_pred H-HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc-cCcchHHHHHHHHHHHHHhccCcch
Confidence 4 4555677888889999999999999999988888888777776665321111 1122233333344445555555555
Q ss_pred hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHhc
Q 004750 637 IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG-LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 637 ~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~ 704 (732)
+. -+++.++|. .-|...|+..+++.+|++.-|..++...+.+| +...|+++..+.+++.+..+...
T Consensus 335 vf-k~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 335 VF-KMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred he-eechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 444666665 47899999999999999999999999999998 88889999999988887766544
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=2.9e-23 Score=221.91 Aligned_cols=177 Identities=22% Similarity=0.159 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
+.+++.++.......+.+.+|. +.+++|+ +..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4556666667777788889994 9999999 899999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh--------c
Q 004750 89 VMLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--------T 159 (732)
Q Consensus 89 L~a~a~-s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~--------~ 159 (732)
++.+++ +++.+++.|++.|++.+. ++....++.|++|+++|++++++......+|..+++......... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998654 566788999999999999999999977777777775443222211 1
Q ss_pred cchhHHHH-HHHHHHHHHHHHHHHhhccCCc
Q 004750 160 APSWRLML-GVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 ~~~Wr~~~-~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+||+.| .+.+++.++..++.+++.+|+|
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 34899999 4446555555555556667665
No 71
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.4e-25 Score=247.05 Aligned_cols=185 Identities=20% Similarity=0.277 Sum_probs=171.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004750 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigl 80 (732)
|++.++.++++++.++++.+|+..+..+++.+.+.||+ +++..|++.+.+.+++.+.+|++|+++|||.||+++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni--~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI--SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC--CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH
Confidence 45667889999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (732)
Q Consensus 81 lL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~ 160 (732)
+++.++.++++++..+|++.++|.+.|+|.+.+.++.+++++|.+|..+|++++++++++..+|..+|.+... .....
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs--~va~~ 183 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGS--VVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeee--eeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999954443 22333
Q ss_pred c-hhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 161 P-SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 161 ~-~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
. .|||.|.+.++++++..++++++++|.+
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 3 3999999999999999999999999864
No 72
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4e-23 Score=233.45 Aligned_cols=152 Identities=24% Similarity=0.407 Sum_probs=138.8
Q ss_pred HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHhh
Q 004750 35 EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLARLLDGFGIGL 112 (732)
Q Consensus 35 ~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~--s~~lLiI~R~l~G~g~G~ 112 (732)
++++ +..+.|++.+.+++|+++++++.|++.||+|.|+++.++.++.+++++++.++. +++.+++.|+++|++.|.
T Consensus 67 ~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 5666 889999999999999999999999999999999999999999999999999865 446779999999999999
Q ss_pred HhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 113 AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 113 ~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
.+|+...+..+|.|++||++..++...+..+|.+++ .+..+.+.+. .||+.+|++.++++++..++.+++..|+|.
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~--mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT--MPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999 5555555555 899999999999999999887788888885
No 73
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=1.3e-21 Score=214.91 Aligned_cols=172 Identities=16% Similarity=0.126 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChH-HHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRP-MLIVSSVLYF 84 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-----GrRk-vLLigllL~a 84 (732)
.+.-++.+|.....+..++|.+.++.|+ +.+++|++..+... .+..+++|+++||+ |||| +++++.++.+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~ 79 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLA 79 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHH
Confidence 3456788899999999999999999999 99999999777775 68999999999999 8875 7888888888
Q ss_pred HHHHHHHhh---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 004750 85 IGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA- 160 (732)
Q Consensus 85 IgslL~a~a---~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~- 160 (732)
++..+..+. .+++.+++..++.+++.+...++..+++.|++|+++|++++++...+..+|.++++. ....+.+.
T Consensus 80 l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~--l~~~l~~~~ 157 (402)
T PRK11902 80 ASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGG--LALWLADRV 157 (402)
T ss_pred HHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhH--HHHHHHhcc
Confidence 887777776 357778888888899899999999999999999999999999999999999999944 33444443
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|||..|++.+++.++..+ ..+++||++
T Consensus 158 ~gw~~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred cCHHHHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 4999999998887766444 345667653
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=2.4e-22 Score=247.21 Aligned_cols=168 Identities=11% Similarity=0.078 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH---hhhhHHHH
Q 004750 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML---WSPNVYVL 99 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a---~a~s~~lL 99 (732)
.....+.+.+..+++.+.+....+++.+++.++++++++++|+++||+|||++++++.++.+++++++. ++++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 333445566777777744556689999999999999999999999999999999998877666555444 35689999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-------cchhHHHHHHHHH
Q 004750 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-------APSWRLMLGVLFI 172 (732)
Q Consensus 100 iI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~-------~~~Wr~~~~i~~~ 172 (732)
+++|++.|++.+...++..+++.|++|+++|++++++.+.+..+|.++++++........ ..+|++.+.+.++
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999955543332210 1245555555544
Q ss_pred HHHHHHHHHHhhccCCch
Q 004750 173 PSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp~ 190 (732)
...+..++..+++||+|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HHHHHHHHHHhcCcCCCC
Confidence 444444444556777653
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.92 E-value=3e-22 Score=215.21 Aligned_cols=150 Identities=19% Similarity=0.312 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004750 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~ 102 (732)
..+++++|.+.+++|+ +.++.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++ .+++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4567889999999999 89999999999999999999999999999999999999998888888777 77889999999
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 004750 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLI 176 (732)
Q Consensus 103 R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i 176 (732)
|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++............+||+.|.+.++++++
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999988888889999997 6899999999999999999985443322211112499999877765443
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=2.1e-21 Score=211.94 Aligned_cols=157 Identities=11% Similarity=-0.009 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH-HHHHHH-H
Q 004750 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV-LYFIGG-L 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll-L~aIgs-l 88 (732)
+.+.++...+..+...|.+|.+.+++|. +..++|++.+++.+...++++++|.++||+||+........ ..++.. .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 5566777777778888999999999999 99999999999999999999999999999998544322221 111222 2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 004750 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (732)
Q Consensus 89 L~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~ 168 (732)
++..+++++.+++.|++.|++.+...|...++..++ .++|+++.+......++|.+++ +.....+.+..|||..|.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g--~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIG--SALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHH--HHHHHHHHHHcChhHHHH
Confidence 344678899999999999999888888888887665 4788999999999999999999 555566677789999998
Q ss_pred HHHHH
Q 004750 169 VLFIP 173 (732)
Q Consensus 169 i~~~l 173 (732)
+.++.
T Consensus 163 ~~~~~ 167 (382)
T TIGR00902 163 ILTAG 167 (382)
T ss_pred HHHHH
Confidence 87655
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=4e-21 Score=213.58 Aligned_cols=175 Identities=10% Similarity=0.137 Sum_probs=118.8
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004750 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
...+.+.++++.|.+... .-+.+. ........+..+..+++.++.++++||+|||++++.+..+..+++.++....
T Consensus 227 ~~~~~~~~~~~~g~~~~~-~~~~~~-~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~-- 302 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEF-ADSFVV-KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD-- 302 (418)
T ss_pred HHHhHHHHHHHhcccccc-cchhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC--
Confidence 345667777765543200 001112 2334444567788889999999999999999999888877766655444310
Q ss_pred hcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHhHHHHHHHhh------c
Q 004750 609 KMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICA-LVFWIGDIIVTYSLPVLLNSV------G 681 (732)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~-~~~~ig~~i~~~~~~~l~~~~------g 681 (732)
......+..++..++.+.+++. ..+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|++.+.. |
T Consensus 303 --~~~~~~~~l~l~~~l~g~~~~~-~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~ 379 (418)
T TIGR00889 303 --PEYFGYALLFLSMIVYGCAFDF-FNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFD 379 (418)
T ss_pred --cchhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCc
Confidence 0000011122223333333332 23444567899999999999999997 567899999999999999984 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004750 682 LAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 682 ~~~~f~~~~~~~~i~~~~~~~~~~et~~~ 710 (732)
|+.+|.+.+++++++.++.++++||+++.
T Consensus 380 ~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 380 WQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 88899999999898888888889988654
No 78
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1e-22 Score=231.34 Aligned_cols=185 Identities=17% Similarity=0.172 Sum_probs=165.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~-~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
.++++..+++.++....+...++.+ +..+.+|.++ ...+.+.+.++|+++++++.+++|.+.||++..+.+....++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~ 120 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGIL 120 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHH
Confidence 3566677777888888887776553 3446688888 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----h
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----M 158 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l----~ 158 (732)
+++..++..+..|++.+++.|++.|+..+..+|+...+++.|+.+++||+.++++.+..++|.++|.++..+... .
T Consensus 121 w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 121 WGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 999988888899999999999999999999999999999999999999999999999999999999888777443 2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004750 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...||||+|++.++++++..++.++++|+.|.
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 34699999999999999999999999999985
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=2.8e-21 Score=213.21 Aligned_cols=141 Identities=10% Similarity=0.076 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccc
Q 004750 557 SLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGP 636 (732)
Q Consensus 557 ~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (732)
...+..+..+...++.++++++.||+|||+.+..+..+..++.+++.+. + +.+..+...++....+.. ..+
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----~---~~~~~~~~~~l~g~~~~~-~~~ 334 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----T---GPLEVSILKLLHAFEVPF-LLV 334 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----c---cHHHHHHHHHHHHHHHHH-HHH
Confidence 3444455677888999999999999999998887777666665554431 1 112222222222222221 122
Q ss_pred hhhhhhccCCCccchhhHHHH-HHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccC
Q 004750 637 IPNILCSEIFPTRVRGICIAI-CALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 637 ~~~~~~~e~~p~~~r~~~~gi-~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~e 706 (732)
....+..|.+|++.++++.+. .+....+|.++++.+.|++.+..||+.+|.+.+++.++..++.++.+++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334667888999999988766 5777899999999999999999999999999998888777666665544
No 80
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.6e-22 Score=230.84 Aligned_cols=182 Identities=18% Similarity=0.156 Sum_probs=162.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.|.|++..++.++...-....++.+.+.+.++++. +.++++|+.++....+.+..++.+.+.||||.|.+.++|.++
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~--s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS--SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC--CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 457788888888777666677778889999999998 788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHH-HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 83 YFIGGLVMLWSPNVYVLLLA-RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~-R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
.+++.++..++++++++++. -++.|+|.|+.+.....++..||+ ++|++++++...+.++|.++- +.+.-.+.+..
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~--~~l~~~l~~~~ 197 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF--PPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH--HHHHHHHHHHh
Confidence 99999999999999988887 789999999999999999998886 779999999999999999998 66667777888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 162 SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
|||+.+++.+.+.+-.++....+.|.+|
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999998887777777777654
No 81
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=6.7e-21 Score=220.34 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=153.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
++|.++++..+...+.+.. ..++.+.|.+++++|+ +..+.+++.++. ....++++++|++.||+|+|++++++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgl--s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNL--TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc--CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5677777666666666554 3456778899999999 889999998874 44567788899999999999999999999
Q ss_pred HHHHHHHHHhh------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004750 83 YFIGGLVMLWS------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 83 ~aIgslL~a~a------~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~ 156 (732)
++++.++++++ ++++.+++.|++.|++.+...+.....+.+|+| ++||++.++...+.++|.++...+.....
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 689999999999999999999999999999997 78999999999999999987533333322
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhccCC--chhhhcccccHHHHHHH
Q 004750 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES--PRWLVSKGRMLEAKKVL 205 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es--p~~l~~~~~~~~~~~~~ 205 (732)
. .+|+..|++.++++++..++.++++++. |+|...++|.++.++..
T Consensus 180 ~---~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~ 227 (591)
T PTZ00207 180 S---DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQ 227 (591)
T ss_pred H---HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHH
Confidence 1 3789999999998888777766666544 34443444444444433
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.90 E-value=1.8e-20 Score=204.48 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCCh----HHHHHHHHHHHHHHHHH
Q 004750 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR----PMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrR----kvLLigllL~aIgslL~ 90 (732)
++......+.+.+.+|.+.+++|. +..+.|++.+++.++..++++++|.++||+||| +.+.++.++. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 555556667888889999999999 999999999999999999999999999999994 3332222222 22233
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
...++++.+++.|++.|++.+...+...+++.++ .++|+++.+....+.++|.+++ +..+..+.+..|||.+|++.
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~ig--p~lgg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIG--SALTGKLVSWFGEQAILWIL 164 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHH--HHHHHHHHHHcChhHHHHHH
Confidence 3457899999999999999998888888887776 3568899999999999999999 66677777778999999887
Q ss_pred HHHHHH
Q 004750 171 FIPSLI 176 (732)
Q Consensus 171 ~~l~~i 176 (732)
++..++
T Consensus 165 ~~~~~~ 170 (382)
T PRK11128 165 TAGVAS 170 (382)
T ss_pred HHHHHH
Confidence 764444
No 83
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=2.8e-21 Score=212.51 Aligned_cols=173 Identities=16% Similarity=0.268 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCCh-HHHHHHHHHHHHHH
Q 004750 14 GNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRR-PMLIVSSVLYFIGG 87 (732)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr----fGrR-kvLLigllL~aIgs 87 (732)
+.+..+.....+.. ..+++.+++|+ ++.+.|++.++..+..++..++.|+++|| +||| +.++++..+.+++.
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVL 84 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHH
Confidence 33444444444444 45678888999 99999999999999999999999999998 6874 56778888888888
Q ss_pred HHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hh
Q 004750 88 LVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LM 158 (732)
Q Consensus 88 lL~a~a~s------~~lLiI~R~l~G~g~G~~~~~~~alIaE~f-P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~--l~ 158 (732)
+++.+.++ ...+++.+++.+++.+...+...++..|.. ++++|+++.++.+.+..+|..++........ ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~ 164 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG 164 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87776653 456677788899988888778888888987 5789999999999998898877754332222 11
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 159 ---TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 159 ---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+..+||+++.+.++++++..++.+++++|.
T Consensus 165 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 165 GGDDKFGWFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 346899999999998888776666666664
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=5.5e-21 Score=236.14 Aligned_cols=178 Identities=11% Similarity=0.116 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHH---HHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIV---SSVL 82 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLi---gllL 82 (732)
+++..+++.+.+++....+..++. .+..+.+.. .....++..+++.+.++++++++|+++||||||+++.. ..++
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~ 94 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAY-NNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIG 94 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccc-hHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHH
Confidence 344455566666666555444433 333344331 23568889999999999999999999999999997533 2222
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
.++..++....++++.++++|+++|++.+...|+..+++.+++|+++|++++++.+++..+|.++| +.+++.+....+
T Consensus 95 ~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ig--p~l~g~l~~~~~ 172 (1140)
T PRK06814 95 IAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLG--TIIGGLATISGN 172 (1140)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHH--HHHHHHHHhccc
Confidence 233233333458999999999999999999999999999999999999999999999999999999 555666667789
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|++.|++.++..++ ..+..+++|++
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 173 FVILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred cHHHHHHHHHHHHH-HHHHHhhCCCC
Confidence 99999554444444 33445556654
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=1.4e-20 Score=205.67 Aligned_cols=172 Identities=15% Similarity=0.113 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
.....+++.......+.+.+|. +.+++|. +..+.|++.+++.+++.++++++|+++||+|||+.++.+++..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3444555666666666777764 5667899 899999999999999999999999999999999999887766655443
Q ss_pred HHH---hh-----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 89 VML---WS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (732)
Q Consensus 89 L~a---~a-----~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~ 160 (732)
... +. .....+++.|++.|++.+...+....+..+..+ +++...+......++|.++++.+ ...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~--~g~l~~- 158 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASI--AGILFS- 158 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHH--Hhhhhc-
Confidence 321 11 123345667888898888888888887777543 34556677778888888888544 343333
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 161 PSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+||++|++.++++++..++.++..||+
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4999999999888887665544444443
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=2.4e-20 Score=200.29 Aligned_cols=161 Identities=17% Similarity=0.158 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChHH-HHHHHHHHHHHHHHHHhh--
Q 004750 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSVLYFIGGLVMLWS-- 93 (732)
Q Consensus 22 ~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-----GrRkv-LLigllL~aIgslL~a~a-- 93 (732)
...+++++|.+.+++|+ +.++.|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34567789999999999 89999999755 444454 99999999998 89887 456777777776677776
Q ss_pred -hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch--------hH
Q 004750 94 -PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS--------WR 164 (732)
Q Consensus 94 -~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~--------Wr 164 (732)
.+.+.+.+..++.+++.+...+...+++.|++|+++|++++++.+.+..+|.++++.. ...+....+ ||
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l--~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSL--ALVLASPEFANTGLITLWG 157 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHH--HHHHhhhcccccccccccH
Confidence 4566677778888999998999999999999999999999999999999999999444 444444556 99
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 004750 165 LMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 165 ~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+|++.+++.++..++.++..||+
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999887777555444456664
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=3.6e-19 Score=194.31 Aligned_cols=175 Identities=12% Similarity=-0.054 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HHHHHHHHHHHHHhH-HHhhhhhCChHHHHHHHHHH-
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLI--VAMSLIGATCITTCS-GAIADWLGRRPMLIVSSVLY- 83 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll--~Sl~~IG~~Ig~~~~-g~LsDrfGrRkvLLigllL~- 83 (732)
.+.++..++.+|.......+.+|.+.++.|. +.+++|++ .+++.+...+.++++ ++..||+||||.+++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 5667778899999999999999999999999 99999997 467788888888888 44799999999876655332
Q ss_pred HHHHHHHH-h--hhh-HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004750 84 FIGGLVML-W--SPN-VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 84 aIgslL~a-~--a~s-~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~ 159 (732)
+++..... + ..+ ...++..-++.++..+...+...++..|..++++++...+....+..+|.+++. .....+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~--~~~~~l~~ 158 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGG--AGTLVLFG 158 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 22222222 1 222 334444556666777777788888899999999999999998888899999994 33444556
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 160 APSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
..+||..|++.+++.++..+..++..|
T Consensus 159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 159 KFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 779999999999888776655433333
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.87 E-value=1.1e-20 Score=221.36 Aligned_cols=179 Identities=17% Similarity=0.206 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
+++...+..+.....++.++.+++.+.++|++ +..+.|++.+.+.++++++.++.+++.||+|||+++.+++++++++
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 34555567788888889999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHhhHhH
Q 004750 87 GLVMLWSP---------------------------------------------------NVYVLLLARLLDGFGIGLAVT 115 (732)
Q Consensus 87 slL~a~a~---------------------------------------------------s~~lLiI~R~l~G~g~G~~~~ 115 (732)
++++++.+ .+..++++|+++|+|.+..++
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 99988753 245678899999999999999
Q ss_pred HHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c-------------------chhHHHHHHHHHHHH
Q 004750 116 LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-A-------------------PSWRLMLGVLFIPSL 175 (732)
Q Consensus 116 ~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~-~-------------------~~Wr~~~~i~~~l~~ 175 (732)
...+++.|++|+++|+++.++.+....+|.++|+++........ . .+|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999965554433211 0 138888988888887
Q ss_pred HHHHHHHhhccCC
Q 004750 176 IYFVLTIFYLPES 188 (732)
Q Consensus 176 i~~~l~~~~~~es 188 (732)
+..++ ++++|+.
T Consensus 272 l~~v~-l~~~p~~ 283 (633)
T TIGR00805 272 LTSIP-FFFFPKA 283 (633)
T ss_pred HHHHH-HHhCccc
Confidence 76654 4555543
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.87 E-value=8.1e-19 Score=198.73 Aligned_cols=165 Identities=10% Similarity=0.081 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHH--hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYI-KRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYF 84 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I-~~~--lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr-fGrRkvLLigllL~a 84 (732)
..+.+..++..+....+.+.+|.+ .++ +|+ +..+.|++.+.+.+++.++.+++|+++|| +|||++++++.++.+
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH
Confidence 444556666666666666666655 455 888 89999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch---hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004750 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 85 IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~---RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~ 161 (732)
++.++.+++++++.++++|++.|++.|...+...+++++++|+++ |+.+.++.+.+.++|.+++ +.....+.+..
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig--~~l~g~l~~~~ 168 (475)
T TIGR00924 91 LGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS--PLLAGVIAENY 168 (475)
T ss_pred HHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH--HHHHHHHHHhc
Confidence 999999998888899999999999999999999999999998754 8889999999999999999 45555566667
Q ss_pred hhHHHHHHHHHHHHHH
Q 004750 162 SWRLMLGVLFIPSLIY 177 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~ 177 (732)
+||+.|.+.++..++.
T Consensus 169 g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIG 184 (475)
T ss_pred ChHHHHHHHHHHHHHH
Confidence 9999999888655543
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.87 E-value=1.2e-18 Score=201.22 Aligned_cols=172 Identities=21% Similarity=0.318 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
..++......+.....+.++++|.+++|- .....|+.+...++.+++.++.|+++|.||||.+++.+.++..+|++.
T Consensus 48 ~~~~~~~~~~~~~~~~a~~l~~I~~diG~---~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv 124 (599)
T PF06609_consen 48 AFSLAVIAAYFVLVLPASILPYINADIGG---SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIV 124 (599)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCC---CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHH
Confidence 34444444555566667788999999995 467788999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004750 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i 169 (732)
++.++|...++++..+.|+|.|.... ....++|..|.|.|+...++.....-+...++ +..........+|||.|++
T Consensus 125 ~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~--~~ia~~~~~~~~WRw~~~~ 201 (599)
T PF06609_consen 125 CATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWIS--PLIAQLFAAHSGWRWIFYI 201 (599)
T ss_pred hhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhccc--HHHHHHhccCCCcchHHHH
Confidence 99999999999999999999888764 45668999999999887776665544444444 3333333445699999999
Q ss_pred HHHHHHHHHHHH-HhhccC
Q 004750 170 LFIPSLIYFVLT-IFYLPE 187 (732)
Q Consensus 170 ~~~l~~i~~~l~-~~~~~e 187 (732)
.++...+.+++. +++.|.
T Consensus 202 ~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 202 FIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 988877665543 444553
No 91
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=2.9e-18 Score=196.76 Aligned_cols=164 Identities=20% Similarity=0.213 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
.++++.++..+...+...+++.+..++.- |+...+++.++..+...+.++++|.++||+.||++++.+-++.++..++
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~--S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTG--SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 34566666677777777777877777765 8999999999999999999999999999999999999998877665554
Q ss_pred HHh-----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 004750 90 MLW-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 90 ~a~-----a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr 164 (732)
.++ ..+.+.+++.-++.|++.+...|+..+++.|..|+++...++++.+...++..++| |..++.+....|-.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG--PalgG~Lva~~G~~ 169 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG--PALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHH
Confidence 443 24778899999999999999999999999999999999999999999999999999 55566655556778
Q ss_pred HHHHHHHHHHHHH
Q 004750 165 LMLGVLFIPSLIY 177 (732)
Q Consensus 165 ~~~~i~~~l~~i~ 177 (732)
++|.+.++..++.
T Consensus 170 ~~f~inalsfl~~ 182 (524)
T PF05977_consen 170 AAFLINALSFLIS 182 (524)
T ss_pred HHHHHHHHHHHHH
Confidence 8888877655443
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.86 E-value=1.8e-18 Score=196.86 Aligned_cols=174 Identities=13% Similarity=0.107 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHH
Q 004750 8 AIAAAIGNLLQGWDNATIA-GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFI 85 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~-~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr-fGrRkvLLigllL~aI 85 (732)
+..+++..+...+...... .+..++.+++|+ +..+.+++.+.+.....+..+++|+++|| +|||++++++.+++++
T Consensus 16 ~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 16 FFMIFFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 3334444444444444333 345677889999 88899999999998888889999999999 9999999999999999
Q ss_pred HHHHHHhhhhHHH-HHHHHHHHHHHHhhHhHHHHHHHHhcCCcc--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 86 GGLVMLWSPNVYV-LLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 86 gslL~a~a~s~~l-LiI~R~l~G~g~G~~~~~~~alIaE~fP~k--~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
++++++++++... ++++|+++|+|.|...+...+++.|.+|++ +|+.+.++++.+.++|.+++ +.....+.+..|
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g--~~l~g~l~~~~g 171 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIS--LSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHH--HHHHHHHHHhhC
Confidence 9999998876444 557899999999999999999999999877 45788999999999999999 555566667779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
||+.|++.++ +++..++.+++.+
T Consensus 172 w~~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 172 YSVTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred hHHHHHHHHH-HHHHHHHHHHHcc
Confidence 9999988655 4443444444443
No 93
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=8.3e-19 Score=196.74 Aligned_cols=163 Identities=12% Similarity=0.180 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCchhH-HHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004750 21 DNATIAGAVLYIKREFHLETEPTI-EGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (732)
Q Consensus 21 ~~~~~~~~~~~I~~~lgl~~s~s~-~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lL 99 (732)
.+..++.+.|++.+++|+ +..+ .|.+.++++.+|+++++++|+++||+|.|+++.++.+.+++.++++++++++..+
T Consensus 41 ~R~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367778899999999999 8888 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH--HHHHHHH
Q 004750 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL--FIPSLIY 177 (732)
Q Consensus 100 iI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~--~~l~~i~ 177 (732)
.+.|++.|++.|+.+ +...++..|+|+++|++++++...+..+|.+++++.... +...|||+.+-.. .+.+.+.
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999544433 3456999866433 3334444
Q ss_pred HHHHHhhccCCc
Q 004750 178 FVLTIFYLPESP 189 (732)
Q Consensus 178 ~~l~~~~~~esp 189 (732)
.++..+++|..+
T Consensus 195 a~~~a~~LP~~~ 206 (511)
T TIGR00806 195 SVFLALFLKRPK 206 (511)
T ss_pred HHHHHHhCCCCc
Confidence 555667888543
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2e-17 Score=180.70 Aligned_cols=170 Identities=19% Similarity=0.155 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
..+++..-+++-|+......+.+|.+++.|++ +..+.+++...++.+|.+.+++.|++.+|+|+|+.+++|+.+++++
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 44555666777888888889999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHH---hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh-----
Q 004750 87 GLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM----- 158 (732)
Q Consensus 87 slL~a---~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~----- 158 (732)
+.++. ...++..++++-|+.|.|.+...+....+++...+++.-...+++.|.+.++|.+++++........
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99885 4568899999999999999999999999999999998888999999999999999996555443331
Q ss_pred ------------ccchhHHHHHHHHHHHHHHH
Q 004750 159 ------------TAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 159 ------------~~~~Wr~~~~i~~~l~~i~~ 178 (732)
....||++|...+...++..
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~ 203 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLA 203 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 11247777777666555544
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=5e-17 Score=185.36 Aligned_cols=162 Identities=14% Similarity=0.189 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr-fGrRkvLLigllL~aIgsl 88 (732)
+++..++..+....+... ..++.+++|+ +..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 334444444444334443 4567789999 88888888888776666667899999999 5999999999999999998
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch--hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004750 89 VMLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI--RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 89 L~a~a~-s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~--RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~ 165 (732)
++++++ +.+.+.++|++.|++.|...+...+++.|++|+++ |+.+.++++.+.++|.+++ +.....+.+..|||+
T Consensus 104 l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g--p~i~g~l~~~~g~~~ 181 (500)
T PRK09584 104 LVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS--MLATPWLAAKYGWSV 181 (500)
T ss_pred HHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH--HHHHHHHHHhhCHHH
Confidence 888864 45667788999999999999999999999998643 4567888899999999999 555555667779999
Q ss_pred HHHHHHHHHHH
Q 004750 166 MLGVLFIPSLI 176 (732)
Q Consensus 166 ~~~i~~~l~~i 176 (732)
.|.+.++..++
T Consensus 182 ~F~i~~i~~~i 192 (500)
T PRK09584 182 AFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHH
Confidence 99987764444
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=6.8e-17 Score=183.35 Aligned_cols=172 Identities=13% Similarity=0.144 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCChHHHHHH-HHHHHHHHHHH
Q 004750 16 LLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRPMLIVS-SVLYFIGGLVM 90 (732)
Q Consensus 16 ~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD----rfGrRkvLLig-llL~aIgslL~ 90 (732)
+-..+..+...+.++++.+++|. +....+++..+..+...+.+++.|.++| |+|||+.++++ .+..+++.++.
T Consensus 14 ~Giq~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll 91 (477)
T TIGR01301 14 AGVQFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILI 91 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 33344455566667778899999 8999999999999999999999999999 59999988775 66666666777
Q ss_pred HhhhhHH-----------------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchh--hhhhhHHHHHHHHHHHHHHHH
Q 004750 91 LWSPNVY-----------------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 91 a~a~s~~-----------------lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~R--G~~~~~~~~~~~~G~~ig~l~ 151 (732)
+++++.. .++++-.+..++.....+...+++.|.+|+++| +.+.++.+.+.++|.++++..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 92 GFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred HhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766543 223333345558888888999999999998865 689999999999999999665
Q ss_pred HHHHHhhcc-------------chhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 152 VFGMSLMTA-------------PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 152 ~l~~~l~~~-------------~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
......... .+.|+.|.+.+++.++..+++.+.++|.|
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 543211111 26789999999988888888888899875
No 97
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.82 E-value=3.8e-17 Score=176.41 Aligned_cols=165 Identities=21% Similarity=0.300 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
..+.+..+----..+.++|+++.|.+++|+ |.+..|+++++..+...+.+++..++..|+|.++.+..++++.+++.+
T Consensus 15 ~gIvlia~NLR~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 15 AGIVLIAFNLRPAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHHHHHHhccchhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 333333333344567778999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHH
Q 004750 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLML 167 (732)
Q Consensus 89 L~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~-~~Wr~~~ 167 (732)
+-... +.+.++..-.+.|.+.+...+..+.++-+.|| ++-+..+++|....++|.++++... ..+..+ .+||..+
T Consensus 93 iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~la--vpla~~~~gW~~aL 168 (395)
T COG2807 93 IRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALA--VPLAQHSGGWRGAL 168 (395)
T ss_pred HHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhh--hHHHHhhccHHHHH
Confidence 98877 78888999999999999999999999999999 5579999999999999999995443 333333 4899999
Q ss_pred HHHHHHHHHHHH
Q 004750 168 GVLFIPSLIYFV 179 (732)
Q Consensus 168 ~i~~~l~~i~~~ 179 (732)
.+.+.++++.++
T Consensus 169 ~~WAl~allAl~ 180 (395)
T COG2807 169 GFWALLALLALL 180 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999888654
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.80 E-value=1.1e-16 Score=178.62 Aligned_cols=174 Identities=14% Similarity=0.170 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCCh-HHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRR-PMLIVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr----fGrR-kvLLigllL~aI 85 (732)
.++.+..+.-...++. +..++.+.+|+ +..+.|++.++..+..++..|+.|.++|| +||| +.++.+.+..++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i 92 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGV 92 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHH
Confidence 3444444443344433 45678888999 99999999999999999999999999998 7874 556677777777
Q ss_pred HHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHH--H
Q 004750 86 GGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGM--S 156 (732)
Q Consensus 86 gslL~a~a~s------~~lLiI~R~l~G~g~G~~~~~~~alIaE~f-P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~--~ 156 (732)
+.++..+.|+ +..+++..++.+.+.....+...++..|+. ++++|++..++-..+..+|..+++...... .
T Consensus 93 ~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 93 VCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7665555442 455666667777777777777788999998 568899999998888888888875433221 1
Q ss_pred hh---ccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004750 157 LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 157 l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
.. ...+|+..+.+.++++++...+.++..+|
T Consensus 173 ~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 173 LGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 11 13589999988888877765554544444
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.80 E-value=1.6e-16 Score=179.19 Aligned_cols=178 Identities=11% Similarity=0.149 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCC-hHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGR-RPMLIVSSVL 82 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD----rfGr-RkvLLigllL 82 (732)
+.-.++.+..++..+.+... ..++.+.+|+ +...+|++..+..+.-++..|++|.++| |+|| |+.++++.+.
T Consensus 9 ~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~ 86 (473)
T PRK10429 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLA 86 (473)
T ss_pred HhhccchhHHhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHH
Confidence 34456666666666666654 4567777899 9999999999999999999999999999 6698 6677778877
Q ss_pred HHHHHHHHHhhh------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 83 YFIGGLVMLWSP------NVYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 83 ~aIgslL~a~a~------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~f-P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
.+++.+++-..+ .+..+++.-++.+++.....+...+++.|.. ++++|.+..++-..+..+|..+.+......
T Consensus 87 ~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 87 NSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777765554433 1344556667778888888888889999998 689999999997777777755553322211
Q ss_pred H--hh---ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 156 S--LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 156 ~--l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
. .. ...+|+....+.+++.++...+.++..+|.
T Consensus 167 ~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 167 VNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 1 11 123688877777777666555555555553
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.78 E-value=6.9e-17 Score=182.78 Aligned_cols=175 Identities=15% Similarity=0.093 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHHHH
Q 004750 6 LVAIAAAIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIVS 79 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~-~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG-----rRkvLLig 79 (732)
.++.+++..++.+|.. ..+.. ..+.+.+++|+ +.++++.+.++..+...+-.+ +|.++||++ ||+.++++
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~ 101 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLS 101 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHH
Confidence 3455666677888988 55544 45566678999 999999999999999988665 999999998 77777777
Q ss_pred HHHHH-HHHHHHHhhhhHHHHH-HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHH---HHHHHHHHHHHHH
Q 004750 80 SVLYF-IGGLVMLWSPNVYVLL-LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTG---CVGMFLAYCMVFG 154 (732)
Q Consensus 80 llL~a-IgslL~a~a~s~~lLi-I~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~---~~G~~ig~l~~l~ 154 (732)
.++.+ ++....+..++...+. +.+++.+++.+...++.-+++.|..+ +++....++.+..+ .+|.++++ ...
T Consensus 102 ~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~--~l~ 178 (468)
T TIGR00788 102 GLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS--LLG 178 (468)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH--HHH
Confidence 76663 4333333345544444 47899999999999999999999998 65655444443333 47888884 444
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 155 MSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 155 ~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+.+.+..+||..|++.+.+.++. .+..++++|.
T Consensus 179 G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 179 GPLLDKTLTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred HHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 45556679999999998887776 3445677775
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=6.8e-15 Score=167.31 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=120.6
Q ss_pred hhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccch--hHHHhhHHHHHHHHHH
Q 004750 524 SGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRR--TLLLSTIPILITSLVV 601 (732)
Q Consensus 524 ~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr--~~~~~~~~~~~i~~~~ 601 (732)
-+.+++......+..+ .+|++..+ ...+..+..+..++|+++.+++.||+|.| ++++.++.+..+..+.
T Consensus 295 dg~~ti~~~~~i~a~~--------~lg~s~~~-l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~ 365 (477)
T PF11700_consen 295 DGVNTIISFAGIYATE--------VLGMSTTQ-LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLY 365 (477)
T ss_pred HHHHHHHHHHHHHHHH--------hcCcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 4677777777777764 45666654 45555667899999999999999999998 6666655554222222
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004750 602 LVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
-.+-.........+.+...+..++++. +..+..+..-++.+|+.|++..+..+|+........++++|.++|.+.+..|
T Consensus 366 g~~G~~~~~~g~~~~~~f~~~a~~~G~-~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 366 GLFGFWPSFFGLKSPWEFWVLAVLIGL-FMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHhhhcccCcccHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111011111011122332223333322 2234456667888999999999999999999999999999999999999987
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004750 682 -LAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 682 -~~~~f~~~~~~~~i~~~~~~~~~~et~~~~ 711 (732)
.+..++...++.+++.++. ..++..|++.
T Consensus 445 ~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred CchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 7778888888877776655 5577666653
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=1.6e-18 Score=188.33 Aligned_cols=146 Identities=20% Similarity=0.249 Sum_probs=137.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al 120 (732)
+.+++|++.+...+...+..++.|.+.||+|+|..+++|++++..+++++++..+++.++++|.++|+|.+...++..++
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcch-hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 121 ISETAPPEI-RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 121 IaE~fP~k~-RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
++|.+|.+. |+.++|+.-.+.++|..+| |+.++.+++..|.+..|+++++++++-..+.++.++.+
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvg--PpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVG--PPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceec--CCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 999999655 7999999999999999999 88888899999999999999999999888766666543
No 103
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=4.8e-15 Score=165.06 Aligned_cols=171 Identities=19% Similarity=0.193 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-ChHHHHHHHHHHHHHHHHHHh
Q 004750 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG-rRkvLLigllL~aIgslL~a~ 92 (732)
-+++.....+...|.++...++.|+ +..++|++.++..+..+++.+++|.++||++ +|+++.+..++.++..++...
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555667778888899999 9999999999999999999999999999987 567777777777777777777
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh--hccchhHHHHHHH
Q 004750 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL--MTAPSWRLMLGVL 170 (732)
Q Consensus 93 a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l--~~~~~Wr~~~~i~ 170 (732)
.++++.+++.-++..+......|...++..+... +++.-.+-.-..+++|-+++.+....... .+..+..+.+++.
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 8889888888888888888888888888888886 34555566677778887777443211111 1112223455555
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 004750 171 FIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~esp 189 (732)
++.+++... ..+.+|+.|
T Consensus 166 ~~~~~ll~~-~~l~lp~~~ 183 (400)
T PF03825_consen 166 AILSLLLAG-FALFLPKTP 183 (400)
T ss_pred HHHHHHHHH-HHHhCCCCc
Confidence 555544332 345577664
No 104
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.76 E-value=5.1e-17 Score=175.99 Aligned_cols=114 Identities=23% Similarity=0.249 Sum_probs=103.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al 120 (732)
+..-.|.+.|.|.+...+.++.+|.++||+|||++++++++..++..++.+.+.|+..++++|++.|+..|.. .+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999977777799999998887 677899
Q ss_pred HHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 004750 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (732)
Q Consensus 121 IaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l 157 (732)
++|.+++++|+++++...+.+++|.++| |..++.+
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilG--PmIGgyl 179 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILG--PMIGGYL 179 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhc--chhhhHH
Confidence 9999999999999999999999999999 4444443
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=6.5e-15 Score=164.39 Aligned_cols=130 Identities=14% Similarity=0.207 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh----CChHHH-HHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL----GRRPML-IVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf----GrRkvL-LigllL~aI 85 (732)
.++.+..........+ +.+++.+.+|+ +..++|++.+...+..++..+++|+++||. |||+.+ +++.+...+
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~ 91 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMI 91 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHH
Confidence 3455555555544444 34577778899 899999999999999999999999999996 777644 556555554
Q ss_pred HHHHHHhhh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHH
Q 004750 86 GGLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 86 gslL~a~a~-------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP-~k~RG~~~~~~~~~~~~ 143 (732)
.+++....+ ....+++.-++.+++.+...+...++..+..+ .++|....++-..+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 92 FSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 444432111 22334455667788888888777777777664 46788887776655444
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=1.4e-15 Score=169.02 Aligned_cols=159 Identities=21% Similarity=0.354 Sum_probs=125.0
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCChH-HHHHHHHHHHHHHHHHHhh-h------
Q 004750 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRP-MLIVSSVLYFIGGLVMLWS-P------ 94 (732)
Q Consensus 27 ~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD----rfGrRk-vLLigllL~aIgslL~a~a-~------ 94 (732)
...+++.+.+|+ ++...|++..+..+..++..|+.|.++| |+|||| .++++.++.+++.+++... |
T Consensus 23 ~~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 456778888899 9999999999999999999999999999 899665 5557778888877777665 4
Q ss_pred -hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhcc---chhHHHH
Q 004750 95 -NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LMTA---PSWRLML 167 (732)
Q Consensus 95 -s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP-~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~--l~~~---~~Wr~~~ 167 (732)
....+.+.-++..++.........++..|..+ .++|.+..+.-+.+..+|.++......... .... .+|+++.
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 22345667777788888888899999999997 578999999999999998865433332222 1111 2799999
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 004750 168 GVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~e 187 (732)
.+.++++++..++.++..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 99999988877777777776
No 107
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=2.8e-14 Score=161.14 Aligned_cols=174 Identities=12% Similarity=0.147 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCCh-HHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRR-PMLIVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr----fGrR-kvLLigllL~aI 85 (732)
.++-+..+.....++. ++.++.+.+|+ ++...|++..+.-+.-++..|+.|.++|| +||| +.++++.+..++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 3444444554455554 45577888899 99999999999999999999999999995 7876 556667777777
Q ss_pred HHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH--
Q 004750 86 GGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-- 156 (732)
Q Consensus 86 gslL~a~a~s------~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP-~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~-- 156 (732)
+.+++-..|. +..+.+.-++..++.........++..|..+ +++|++..++-..+..+|..++++......
T Consensus 93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666554442 3445566677788888888888899999987 899999999999999998877754432221
Q ss_pred hh---ccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004750 157 LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 157 l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
.. ...+|+....+.+++.++...+.++..+|
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 11 11368888877777766655444444444
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.72 E-value=6.1e-14 Score=160.00 Aligned_cols=157 Identities=18% Similarity=0.185 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhh
Q 004750 16 LLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWS 93 (732)
Q Consensus 16 ~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIgslL~a~a 93 (732)
+...+....+...+| ++.+++|+ +..+.+++.+.+.+...++.+++|+++||+ |||++++++.++.+++.++.+..
T Consensus 19 ~~e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~ 96 (493)
T PRK15462 19 IWEYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS 96 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333334444 56677899 899999999999999999999999999999 99999999999999988776653
Q ss_pred h-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004750 94 P-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 94 ~-s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k--~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
. +...+.++..+.+++.|...+...++++|.+|++ +|..+.++...+.++|.+++ |.....+.+..||++.|.+.
T Consensus 97 ~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ia--p~l~g~L~~~~Gw~~~F~ia 174 (493)
T PRK15462 97 EIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIA--PIACGYAQEEYSWAMGFGLA 174 (493)
T ss_pred hcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHH--HHHHHHHHhhhChHHHHHHH
Confidence 3 2233444444555667777787889999999875 79999999999999999999 55555666677999999987
Q ss_pred HHHHHH
Q 004750 171 FIPSLI 176 (732)
Q Consensus 171 ~~l~~i 176 (732)
++..++
T Consensus 175 aigm~l 180 (493)
T PRK15462 175 AVGMIA 180 (493)
T ss_pred HHHHHH
Confidence 664433
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.64 E-value=2e-13 Score=152.03 Aligned_cols=146 Identities=12% Similarity=0.110 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
+.......+..+...+...++.++++|+|.|+.++++..++.+=.++..+.. +.+.....-.+-+.-+.+..
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--------~~~~i~~~klLH~~e~~l~l 330 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--------NPWVISLIKLLHALEFPLLL 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----------SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--------chHHHHHHHHHHHHHHHHHH
Confidence 3344445667888889999999999999999999998888888877766631 22333333344444443333
Q ss_pred cchhhhhhccCCCccchhhHHHHH-HHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 635 GPIPNILCSEIFPTRVRGICIAIC-ALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~-~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
.+. .-|+++.+|+|..++...+. +...++|.++.+.++|.+.|..|++.+|++++++.++..++..+.++..++
T Consensus 331 va~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 331 VAA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 222 35779999999999999986 577899999999999999999999999999999988888887777765544
No 110
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.62 E-value=5.1e-14 Score=155.89 Aligned_cols=186 Identities=16% Similarity=0.186 Sum_probs=148.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigll 81 (732)
+++|+++++.++-++.+++..-.+++.-.+....|+ +....-|+..+|.+.+....+++-|+.|++|-|..++++..
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 589999999999999999988888888888888888 45677789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh------hhHH--HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004750 82 LYFIGGLVMLWS------PNVY--VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 82 L~aIgslL~a~a------~s~~--lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l 153 (732)
+.++++.+-..+ +.++ ....+..+.+++.-..+........-|||+++|..+..+-.++..+|.+++.+++.
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 999999987764 3344 66677888888887777777788889999999999999998888899998866654
Q ss_pred HHHhhc----cchhHH--HHHHHHHHHHHHHHHHHhhccCCch
Q 004750 154 GMSLMT----APSWRL--MLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 154 ~~~l~~----~~~Wr~--~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...-.. ...|-. +|.....++.+.+++..++.++.|+
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~ 240 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPP 240 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 443222 345655 4555555555555666666666553
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.59 E-value=4.2e-12 Score=143.09 Aligned_cols=177 Identities=20% Similarity=0.295 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCC-hHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLY 83 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr----fGr-RkvLLigllL~ 83 (732)
.-.++-+..+.........+. ++.+.+|+ ++...|.+..+.-+.-++.-|+.|.++|| +|| |+.++.+.+..
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 334455555555555444444 67778899 99999999999999999999999999995 785 46677788888
Q ss_pred HHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004750 84 FIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 84 aIgslL~a~a~s------~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP-~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~ 156 (732)
++.+.++-.+++ ....++.-.+.+++.........++..|+.+ ++||....+.-+.+..+|.++.........
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877663 4556667888999999998888899999985 789999999999999999777644332221
Q ss_pred -hh-c---cchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 157 -LM-T---APSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 157 -l~-~---~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.. . ..||+.+-++.+++.++.+.+.++.++|.
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 11 1 34899998888888888777777666664
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.58 E-value=1.1e-12 Score=144.75 Aligned_cols=169 Identities=17% Similarity=0.181 Sum_probs=116.4
Q ss_pred hhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHH
Q 004750 524 SGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLV 603 (732)
Q Consensus 524 ~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~ 603 (732)
-|.+++......+-.. .+|+++ ..-+++.....+..++|+++.|++.||+|-|+++..++.++.+.++...
T Consensus 266 DGv~til~~~~~fg~~--------~~gls~-~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~ 336 (438)
T COG2270 266 DGVNTILAMGGVFGAA--------DLGLSS-TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI 336 (438)
T ss_pred hhHHHHHHHHHHHHHH--------HcCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH
Confidence 3677777777666653 355665 5566677788999999999999999999999888887777766655544
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhch-
Q 004750 604 LSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGL- 682 (732)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~- 682 (732)
+... ...+....+..+.+..+..+..-.+..+++|++..+..+|+.++.++.+.+++|.+.+.+.+.+|-
T Consensus 337 ~~~~---------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 337 FLEG---------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred Hccc---------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 4211 122222222333333345566678889999999999999999999999999999999999988774
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004750 683 AGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 683 ~~~f~~~~~~~~i~~~~~~~~~~et~~~~ 711 (732)
+..+..+.++.+++ ++.+..+|+.+.++
T Consensus 408 r~g~~~i~vll~iG-l~~L~~v~~~~~~~ 435 (438)
T COG2270 408 RAGVLSIIVLLLIG-LLLLLRVKVPGRRE 435 (438)
T ss_pred hhHHHHHHHHHHhh-HhhEEeecCCCCcc
Confidence 33333444444444 33444566554443
No 113
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.57 E-value=3.5e-13 Score=152.75 Aligned_cols=185 Identities=16% Similarity=0.164 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHH-HHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH---HHhhhh
Q 004750 20 WDNATIAGAVLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV---MLWSPN 95 (732)
Q Consensus 20 ~~~~~~~~~~~~I-~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL---~a~a~s 95 (732)
.....+...+|.+ .+.+|. +....+++.+...++..++.+++|+++||+|||+++.++.++..++.+. ...+++
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV 341 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3333344455654 466788 7777788888889999999999999999999999988887654433332 223445
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHH
Q 004750 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPS 174 (732)
Q Consensus 96 ~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~-~~Wr~~~~i~~~l~ 174 (732)
...+++++++.|++.+........++.|.+|++.|+.++++......++..+++.. ...+.+. .+|+.++++..+++
T Consensus 342 ~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i--~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 342 IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTL--AAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchHHHHHHHHHH
Confidence 77788889999998888778888889999999999999987433344444555332 2333332 35788777777776
Q ss_pred HHHHHHHHhhccCCchhhhcc-----cccHHHHHHHHHhh
Q 004750 175 LIYFVLTIFYLPESPRWLVSK-----GRMLEAKKVLQSLR 209 (732)
Q Consensus 175 ~i~~~l~~~~~~esp~~l~~~-----~~~~~~~~~~~~~~ 209 (732)
++.++. .+++||||+|+.++ +|.+|+++.+++++
T Consensus 420 ~i~~~~-~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 420 VIGLIT-GVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHH-HHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 665544 56679999998865 89999999998887
No 114
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.55 E-value=2.9e-12 Score=137.75 Aligned_cols=153 Identities=13% Similarity=0.060 Sum_probs=100.4
Q ss_pred HHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHH
Q 004750 518 QILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILIT 597 (732)
Q Consensus 518 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i 597 (732)
..+.......++..|.+.++.+.. .+|.++.+.+.. ...+..+.++|++++++++||+|+|+++..+..+..+
T Consensus 148 ~~f~yvg~e~~~~~w~~~yl~~~~------~~g~s~~~a~~~-~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~ 220 (310)
T TIGR01272 148 GIFVYVGAEVSAGSFLVNFLSDPH------ALGLPEDQAAHF-TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVL 220 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc------cCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 333333345677889999997521 245666555555 5567889999999999999999999887776665555
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 004750 598 SLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL 677 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~ 677 (732)
+.+++... +.....+.+++++++.+ ...|.......+.+|++ .+++.++. .+..+|+++.|.+.|.+.
T Consensus 221 ~~~l~~~~---------~~~~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 221 LSIGAALT---------HGYVAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHc---------CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 54333221 11122223333333332 33455556667777764 45667775 677899999999999999
Q ss_pred HhhchhHHHHHH
Q 004750 678 NSVGLAGVFGMY 689 (732)
Q Consensus 678 ~~~g~~~~f~~~ 689 (732)
|..|.+.+|++.
T Consensus 289 d~~g~~~a~~v~ 300 (310)
T TIGR01272 289 DCLGIQLAFALP 300 (310)
T ss_pred HhccchHHHHHH
Confidence 999988777633
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.54 E-value=1.9e-14 Score=150.73 Aligned_cols=143 Identities=14% Similarity=0.104 Sum_probs=117.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVL 82 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr-fGrRkvLLigllL 82 (732)
+..++..+++-.+-..++...-+..-.+...+.++ +.++..++-+.+..-..+.++++|++.|| +|.|..-++-++.
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 45566666666666777766655555677777777 77888999999999999999999999996 6888777776677
Q ss_pred HHHHHHHHH---hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004750 83 YFIGGLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 83 ~aIgslL~a---~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig 148 (732)
..++.++++ +.+.+|.+.++||+.|+|.-..-++-..+..-||..|+.+.++|+.....-+|...-
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvN 188 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVN 188 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceee
Confidence 777777765 478999999999999999888878889999999999999999999888888887765
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.49 E-value=3.1e-13 Score=122.78 Aligned_cols=138 Identities=31% Similarity=0.498 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc
Q 004750 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE 128 (732)
Q Consensus 49 ~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k 128 (732)
.+.+.++..++.+++|++.||+|||+.+..+..+..++.++..+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567788999999999999999999999999999999888888899999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 129 IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 129 ~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+|++.+++.+....+|..+++ .......+..+|++.+.+.++++++..++.+++.||+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGP--PLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhH--HhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999994 4445555677999999998888887776666666653
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.48 E-value=6.3e-13 Score=150.13 Aligned_cols=187 Identities=20% Similarity=0.280 Sum_probs=148.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCC-hHHHHHHH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLIVSS 80 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGr-RkvLLigl 80 (732)
+..|..+.++.+..++.+.....+.+..-+..++++.+.+.+..||+.++..++.+++++++|+...|.+. |+.++++.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 35688888888889999988888777655555665554488899999999999999999999999999996 88899999
Q ss_pred HHHHHHHHHHH-h---hh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 81 VLYFIGGLVML-W---SP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 81 lL~aIgslL~a-~---a~-s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
++++++.++.. . .+ ..+.++++|++.|+|.|.. ...-+++++....+.|.++++....+..+|.++|+......
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 99999999883 3 23 5789999999999998777 67789999988888999999998888888888885444333
Q ss_pred Hhhccch-----------hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 156 SLMTAPS-----------WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 156 ~l~~~~~-----------Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.-....| +-.+-++.++++++.+++.+++++|.+
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 2222222 234557888888888888888888864
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.47 E-value=5.3e-12 Score=147.86 Aligned_cols=180 Identities=19% Similarity=0.250 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004750 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aI 85 (732)
..+.++++..+.+++..+.+...+..|.+.|++ +.++.|++.+.+-++..+...+..+..-|.-|-+++-+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i--~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI--SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC--CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 345667777888888888888889999999999 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--------------------h--------------------------------hHHHHHHHHHHHHHHHhhH
Q 004750 86 GGLVMLWS--------------------P--------------------------------NVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 86 gslL~a~a--------------------~--------------------------------s~~lLiI~R~l~G~g~G~~ 113 (732)
+++++++- + -+..++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99998761 1 1236777899999999999
Q ss_pred hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh--cc-----------c----hhHHHHHHHHHHHHH
Q 004750 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--TA-----------P----SWRLMLGVLFIPSLI 176 (732)
Q Consensus 114 ~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~--~~-----------~----~Wr~~~~i~~~l~~i 176 (732)
++...+|+-|...+++-...+++..+...+|.++|.+......-. +. . .|..-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999996665554321 11 1 356666666766666
Q ss_pred HHHHHHhhccCC
Q 004750 177 YFVLTIFYLPES 188 (732)
Q Consensus 177 ~~~l~~~~~~es 188 (732)
..+ .++++|..
T Consensus 335 ~a~-p~f~fPk~ 345 (735)
T KOG3626|consen 335 SAV-PLFFFPKE 345 (735)
T ss_pred HHH-HHHhCccc
Confidence 554 35666644
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.37 E-value=3.8e-11 Score=133.90 Aligned_cols=162 Identities=14% Similarity=0.147 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHhCCCC------chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh----
Q 004750 25 IAGAVLYIKREFHLET------EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP---- 94 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~------s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~---- 94 (732)
.....+...++.+.+. +.+..+.+.++..++.+++.++.|+++||+|+|++++++.++.+++.++.....
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 3344455556666411 236779999999999999999999999999999999999999988876666532
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhcc------chhHHHH
Q 004750 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTA------PSWRLML 167 (732)
Q Consensus 95 s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~------~~Wr~~~ 167 (732)
+++.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|.++++.. .+.+.+. .||+.+|
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l--~G~l~~~~g~~~~~~~~~~f 384 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL--SGVMVEKMFAYGTFDWQTMW 384 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH--HHHHHHHhccccCCchHHHH
Confidence 34667788999999999998999999999999999999999997 6788999999544 4444443 4799999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 004750 168 GVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~es 188 (732)
.+.++++++..++.+++++|+
T Consensus 385 ~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 385 LFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 999999888888888888887
No 120
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.36 E-value=5.3e-14 Score=162.29 Aligned_cols=144 Identities=20% Similarity=0.228 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
+.+++..+++...++.+...+..|.+.|++ +.++.|++.+.+-++..+..++..++.+|..|-+++-+|.++++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~ 83 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSL 83 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHH
Confidence 344555566677788888889999999999 999999999999999999999999999998888999999999999988
Q ss_pred HHHhh------------h--------------------------------------hHHHHHHHHHHHHHHHhhHhHHHH
Q 004750 89 VMLWS------------P--------------------------------------NVYVLLLARLLDGFGIGLAVTLVP 118 (732)
Q Consensus 89 L~a~a------------~--------------------------------------s~~lLiI~R~l~G~g~G~~~~~~~ 118 (732)
++++- . -++.++++.++.|+|....++...
T Consensus 84 l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 84 LFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred HHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 87641 0 136788889999999999999999
Q ss_pred HHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 119 IYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 119 alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
+|+-|..++++-+...|+......+|.++|.+....
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp ------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 999999999999999999999999999999666543
No 121
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.36 E-value=2.4e-11 Score=134.28 Aligned_cols=147 Identities=13% Similarity=0.175 Sum_probs=126.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al 120 (732)
+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++..++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999988888888899999999999999998888888899
Q ss_pred HHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 121 IaE~fP~k~RG~~~~~-~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+.+.+|++.|+...+. .++...+|.+++ +...+.+.+..|||.+|.+.+++.++..++.++.+++.|
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig--~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFL--STLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHH--HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999887655 567788999999 455566677779999999988888776766666666543
No 122
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.36 E-value=8.7e-10 Score=124.23 Aligned_cols=148 Identities=21% Similarity=0.208 Sum_probs=122.4
Q ss_pred HHHHHHHHhC----CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhh--hHHHHH
Q 004750 28 AVLYIKREFH----LETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSP--NVYVLL 100 (732)
Q Consensus 28 ~~~~I~~~lg----l~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIgslL~a~a~--s~~lLi 100 (732)
..-|+..+++ + +.++..-+.+.|..-.-+..+++|+++||+ |+|++++.|.++.++|.++.+.+. +...+.
T Consensus 44 L~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~ 121 (498)
T COG3104 44 LILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLY 121 (498)
T ss_pred HHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHH
Confidence 4457777777 8 666666666666666677889999999996 999999999999999999999884 788899
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCc--chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLAVTLVPIYISETAPP--EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 101 I~R~l~G~g~G~~~~~~~alIaE~fP~--k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
++-++.++|.|..=+...++++|.+|+ .+|-..++++.++.++|..++ |..........||...|...++-..+.+
T Consensus 122 i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~--p~i~~~~~~~~g~~~gF~~aavGm~~gl 199 (498)
T COG3104 122 IGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA--PIITGLLAINYGWHVGFGLAAVGMIIGL 199 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH--HHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999975 347778888999999999999 5555666778899999998887666544
Q ss_pred H
Q 004750 179 V 179 (732)
Q Consensus 179 ~ 179 (732)
+
T Consensus 200 ~ 200 (498)
T COG3104 200 V 200 (498)
T ss_pred H
Confidence 4
No 123
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.35 E-value=7.6e-11 Score=123.40 Aligned_cols=166 Identities=27% Similarity=0.375 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChH-HHHHHHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVLYIKREF-HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRP-MLIVSSVLYFIGGLV 89 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~~l-gl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRk-vLLigllL~aIgslL 89 (732)
.+..++.......+....|.+.++. |. +..+.+++.+...++..++.++++++.||+|||+ .+.++.++..++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3344444555555566667666655 88 8899999999999999999999999999999999 999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004750 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i 169 (732)
..+.++.+.+.+..++.|++.+...+...+++.|..|+++|++.+++.+....+|..++ +.......+..+|++.+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~i~g~l~~~~~~~~~~~~ 336 (352)
T cd06174 259 LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALG--PLLAGLLLDTGGYGGVFLI 336 (352)
T ss_pred HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcccCcchHHHH
Confidence 99988899999999999999999999999999999999999999999999999999999 5555666667899999999
Q ss_pred HHHHHHHHHHHH
Q 004750 170 LFIPSLIYFVLT 181 (732)
Q Consensus 170 ~~~l~~i~~~l~ 181 (732)
.++++++..++.
T Consensus 337 ~~~~~~i~~i~~ 348 (352)
T cd06174 337 LAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHh
Confidence 999888766543
No 124
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.34 E-value=1.1e-10 Score=139.23 Aligned_cols=160 Identities=18% Similarity=0.124 Sum_probs=112.1
Q ss_pred HHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHH
Q 004750 528 GVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~ 607 (732)
.+...+|.+..+. |++....+. +..+..++.+++.++.|+++||+|||+.++.+.++..++.++..+..
T Consensus 185 ~is~ilp~i~~~~---------gls~~~~g~-l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDL---------CIPDSGKGM-LGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ- 253 (742)
T ss_pred HHHHHHHHHHHHh---------CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3455566665554 455544444 45567899999999999999999999999888877776666554421
Q ss_pred hhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------
Q 004750 608 IKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV------- 680 (732)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~------- 680 (732)
..+..++.-++.+++.+ +..+...+++.|.+|++.|+...++..++..+|.++++.+...+....
T Consensus 254 -------s~~~llv~R~l~G~g~g-~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g 325 (742)
T TIGR01299 254 -------GYGFFLFCRLLSGFGIG-GAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMG 325 (742)
T ss_pred -------hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccc
Confidence 12222333333333333 334677889999999999999999999999999999998877766543
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 681 ------GLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 681 ------g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
+|++.+++.++.++++ ++..+++||+
T Consensus 326 ~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPES 357 (742)
T TIGR01299 326 SAYQFHSWRVFVIVCAFPCVFA-IGALTFMPES 357 (742)
T ss_pred cccccccHHHHHHHHHHHHHHH-HHHHHHcCCC
Confidence 4677776666555544 4556678988
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.33 E-value=5.3e-11 Score=126.32 Aligned_cols=151 Identities=18% Similarity=0.132 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHH
Q 004750 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNV--YVLL 100 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~--~lLi 100 (732)
..+....+.+.++++. +..+.+++.+.+.++..++++++|+++||+|||+.+.++.++.+++.++..+.++. ..++
T Consensus 222 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T TIGR00890 222 LLLIGLYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFL 299 (377)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHH
Confidence 3344445666788888 78889999999999999999999999999999999999998888888877766543 3345
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (732)
Q Consensus 101 I~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~ 177 (732)
+..++.|++.+...+....++.|.+|+++|+++.++.+....+|.+++ +.......+..||++.|.+.++++++.
T Consensus 300 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 300 ATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFG--GLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH--HHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 667888999888888888999999999999999999999999999999 455555667779999999888776653
No 126
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.31 E-value=1.1e-10 Score=125.51 Aligned_cols=170 Identities=18% Similarity=0.148 Sum_probs=123.1
Q ss_pred HhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHH
Q 004750 522 QLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVV 601 (732)
Q Consensus 522 ~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~ 601 (732)
...+........|.+.++.| .+..+ ..+...+..++.+++.++.|++.||+|||+.+..+..+..++.+.
T Consensus 17 ~~~~~~~~~~~~p~~~~~~g---------~s~~~-~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 17 GPLGIDMYLPAFPEIAADLS---------TPASI-VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHhcccHHHHHHHhC---------CCHHH-HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 33344445555666666544 44544 445556778999999999999999999999999888777777666
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004750 602 LVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
+.... +.+...+..++.+.+.+ ...+....+..|.+|++.|+++.++.+....+|..+++.+.+.+.+..|
T Consensus 87 ~~~~~--------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 157 (385)
T TIGR00710 87 LALSN--------NIETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS 157 (385)
T ss_pred HHHHc--------cHHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 55421 11122222222222222 2234556778999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004750 682 LAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 682 ~~~~f~~~~~~~~i~~~~~~~~~~et~~~ 710 (732)
|+..|++.++++++..++.++..||++..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 158 WHAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999888888877777777877543
No 127
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.31 E-value=1e-10 Score=130.49 Aligned_cols=181 Identities=14% Similarity=0.096 Sum_probs=128.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 004750 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTL 587 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~ 587 (732)
++..+...++..+..+.....+..+.|.+.++.| ++..+ ..++..+..++..++.++.|+++||+|||++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~s~~~-~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~ 90 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLG---------LSRSD-IGLLATLFYITYGVSKFVSGIVSDRSNARYF 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcC---------CCHHH-HHHHHHHHHHHHHHHHhhhhHHHhhcCCchh
Confidence 4444444444444444444456778888887654 44444 4445556889999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 004750 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDI 667 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~ 667 (732)
+..+..+..++.+++.+.. ..+..++..++...+.+.. .+....++.|.+|++.|+++.++.+....+|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~ 161 (434)
T PRK11663 91 MGIGLIATGIINILFGFSS--------SLWAFALLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA 161 (434)
T ss_pred HHHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9888888777776655421 1112222222233333322 345567789999999999999999999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
+++.+.+++.+..||++.|++.++++++..++..+.+||+
T Consensus 162 ~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 162 LIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999988887776655555566664
No 128
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=3.6e-11 Score=128.80 Aligned_cols=166 Identities=18% Similarity=0.211 Sum_probs=121.4
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004750 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
......++.|.+.++.| .+..+. .++..+..++.+++.++.|+++||+|||+.+..+..+..++.+++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 101 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWG---------LDPVQL-GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL 101 (398)
T ss_pred HHHHHHhhHHHHhhccC---------CCHHHH-HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34556677787777644 444444 44455678889999999999999999999998888777766665544
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004750 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
.. +.+..++..++.+++.+ ...+....+..|.+|++.|+++.++......+|.++++.+.+.+.+..||+.
T Consensus 102 ~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 102 AT--------NVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred cc--------chHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 21 11222222222222222 2345566788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 685 VFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
.|++.++++++..++.+..+||+..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 9998877777777777777887643
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.29 E-value=3.6e-10 Score=123.54 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 004750 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (732)
Q Consensus 24 ~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R 103 (732)
.....++.+.++.+. + ..++..+.+.++..++.++.|++.||+|+|+.+.++.++.+++.++..+.++.+.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T PRK05122 234 TIATFITLYYAARGW--D--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGA 309 (399)
T ss_pred HHHHHHHHHHHHccc--c--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 333444544555565 2 346667788889999999999999999999999999888888888888888888888899
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 004750 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 104 ~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
++.|++.+..++.....+.|.+|+++||++.++++....+|..+++ .......+..||++.|.+.++++++.+++.++
T Consensus 310 ~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~--~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 310 ALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITG--PLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888889999999999999999999999998884 34455566679999999988888876666554
Q ss_pred hccCC
Q 004750 184 YLPES 188 (732)
Q Consensus 184 ~~~es 188 (732)
..++.
T Consensus 388 ~~~~~ 392 (399)
T PRK05122 388 LYRRA 392 (399)
T ss_pred hcccc
Confidence 44433
No 130
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.28 E-value=4.4e-10 Score=123.50 Aligned_cols=155 Identities=19% Similarity=0.194 Sum_probs=123.3
Q ss_pred HHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004750 27 GAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (732)
Q Consensus 27 ~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l 105 (732)
..+| ++.+++|+ +..+.+++.+...++..++.+++|+++||+|||+.+..+.+...+......+.++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3445 56677898 88889998888888888899999999999999998887776666655555556777788888999
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 004750 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (732)
Q Consensus 106 ~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~ 185 (732)
.+++.|...+....+..|.+|. +||.++++.+....+|.++++ ...+.+.+..+|+.+|++.++++++.+++ .+++
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~--~l~G~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAG--SLAGIVAEIWNYHAVFWFALVMIIATLFC-LLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhh
Confidence 9998888878888888999985 599999999999999999994 44455666679999999888877775544 4455
Q ss_pred cC
Q 004750 186 PE 187 (732)
Q Consensus 186 ~e 187 (732)
||
T Consensus 391 ~~ 392 (393)
T PRK15011 391 KD 392 (393)
T ss_pred cC
Confidence 54
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=99.28 E-value=3e-10 Score=124.26 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=116.7
Q ss_pred HhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhc
Q 004750 531 YYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKM 610 (732)
Q Consensus 531 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~ 610 (732)
..+|.+.++ +|.+..+.+.. ...+.+...++.+..|++.||+|||+++..+..+..++.+...+..
T Consensus 30 ~~~~~l~~~---------~~~s~~~~g~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 95 (390)
T PRK03545 30 GLLSDIAQS---------FHMQTAQVGLM-LTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW---- 95 (390)
T ss_pred cchHHHHhH---------cCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc----
Confidence 345665555 45555555544 4567788888889999999999999999999888877776665521
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHH
Q 004750 611 GSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYA 690 (732)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~ 690 (732)
+.+..++..++.+.+. ....+....+..+.+|++.|+.+.|+......+|..++|.+.+.+.+..||++.|++.+
T Consensus 96 ----~~~~l~~~r~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~ 170 (390)
T PRK03545 96 ----NFTVLLISRIGIAFAH-AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIG 170 (390)
T ss_pred ----cHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHH
Confidence 1122222222222222 22345556778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCC
Q 004750 691 VVCVISWIFVFIKVPETK 708 (732)
Q Consensus 691 ~~~~i~~~~~~~~~~et~ 708 (732)
+++++..++.+..+|+.+
T Consensus 171 ~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 171 GGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 988888777776677643
No 132
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.27 E-value=1.1e-10 Score=127.44 Aligned_cols=179 Identities=13% Similarity=0.054 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
..+...+..+........+....|.+.+++|. +..+.++......++..++.+++|+++||+|||+.+.++.++.+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYYSPTIFENAGV--STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33344444444444344455567888889998 6778889999999999999999999999999999999998888887
Q ss_pred HHHHHh-----hh------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 87 GLVMLW-----SP------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 87 slL~a~-----a~------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
.++..+ .+ +...+....++.+.......+....++.|.+|+++|+.++++.+....+|.+++ +....
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~--~~~~~ 440 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIV--GFLFP 440 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 776652 11 222233333333332223346667788999999999999999999999999999 44445
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 156 SLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 156 ~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
...+..+|++.|++.++++++.+++.+++.||++
T Consensus 441 ~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 441 TMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 5556678999999999988887877777788763
No 133
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.27 E-value=2.1e-10 Score=125.14 Aligned_cols=182 Identities=13% Similarity=0.120 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004750 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
|.+.+......++..+.......+|.+.++.|.+ .. ...+...+..++.+++.++.|+++||+|||+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s---------~~-~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~ 72 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNAS---------EA-QLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAI 72 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCC---------HH-HHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHH
Confidence 4455666666667767777778888888876544 43 4445556678888999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 004750 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIV 669 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~ 669 (732)
.+..+..++.+.+.... +.+..++..++.+.+.+ ...+..+.++.|.+|++.|+.+.++.+....++.+++
T Consensus 73 ~~~~~~~i~~~~~~~~~--------~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~ 143 (392)
T PRK10473 73 PGAALFIIASLLCSLAE--------TSSLFLAGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLA 143 (392)
T ss_pred HHHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777666554421 11122222222222222 2234556788999999999999999999999999999
Q ss_pred HhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004750 670 TYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 670 ~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~ 710 (732)
|.+.+.+.+..||+..|++.++++++..++.+..+||++..
T Consensus 144 ~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 144 PVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999988889999999999988888888777778887543
No 134
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.27 E-value=3.4e-08 Score=109.48 Aligned_cols=118 Identities=20% Similarity=0.179 Sum_probs=93.4
Q ss_pred HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHH-HHHHHHHHHHHHHHhh-----h------
Q 004750 32 IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLI-VSSVLYFIGGLVMLWS-----P------ 94 (732)
Q Consensus 32 I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG-----rRkvLL-igllL~aIgslL~a~a-----~------ 94 (732)
+..|+++ .....+.+.++..+. ....+.+|+.+|+.+ ||..++ .|.++.+.+..+..++ .
T Consensus 6 MIvEL~v--pA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGV--PAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhcc--HHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 5678898 788899999988876 557999999999999 775554 5566656555555442 2
Q ss_pred --hH---HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 95 --NV---YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 95 --s~---~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
.+ ....++-++.|+|.+...+...+++.|..|+++|+++.++..+..-+|.+++.+..
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 11 24445577899999999999999999999999999999999999999999995544
No 135
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=3.9e-10 Score=123.09 Aligned_cols=158 Identities=17% Similarity=0.149 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004750 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 22 ~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI 101 (732)
...+....|.+.++.+. + ..++..+.+.++..++++++|++.||+|+|+.+.++..+.+++.++..+.++.+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (392)
T PRK12382 232 FAVIGTFVSLYFASKGW--A--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALA 307 (392)
T ss_pred HhHHHHHHHHHHHhcCC--c--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 33344445555566666 3 3456677788888999999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 004750 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 102 ~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
..++.|++.+..++...+.+.+.+|+++||++.++.+....+|..++ +.....+.+..||++.|.+.+++.++..++.
T Consensus 308 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig--~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 385 (392)
T PRK12382 308 GAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVS--GPLAGMLATSFGYPSVFLAGAISAVLGIIVT 385 (392)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 99999999999888888899999999999999999999999999999 5555666677799999999998887766665
Q ss_pred Hhhc
Q 004750 182 IFYL 185 (732)
Q Consensus 182 ~~~~ 185 (732)
+++.
T Consensus 386 ~~~~ 389 (392)
T PRK12382 386 ILSF 389 (392)
T ss_pred Hhhc
Confidence 5443
No 136
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.26 E-value=8.2e-11 Score=131.31 Aligned_cols=179 Identities=15% Similarity=0.104 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhH
Q 004750 513 VGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTI 592 (732)
Q Consensus 513 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~ 592 (732)
+.+.+..+.............|.+.++.|. +..+ ..+....+.++.+++.++.|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGS---------SLSQ-VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------Chhh-hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 344444444444556677888888887654 3333 445556788999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004750 593 PILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 593 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
.+..++.++..... +.+..++..++.+.+. ....+....+..|.+|++.|+.+.++......+|..++|.+
T Consensus 75 ~~~~~~~~~~~~~~--------~~~~l~~~~~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 75 FAFTLGSLLCGVAP--------NLELMIIFRVIQGFGG-GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHhCcC--------CHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 87777766654421 1122222222222222 23345667788999999999999999999999999999999
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004750 673 LPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 673 ~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~ 710 (732)
.+++.+..||++.|++.+.++++..++..+.+||++..
T Consensus 146 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 146 GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc
Confidence 99999999999999998888888877777777775543
No 137
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.25 E-value=5.4e-10 Score=123.38 Aligned_cols=158 Identities=16% Similarity=0.177 Sum_probs=118.2
Q ss_pred hHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc
Q 004750 532 YTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG 611 (732)
Q Consensus 532 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 611 (732)
.+|.+.++ +|.++.+.+.. ..+..++..++.++.|++.||+|||++++.+..+..++.+...+.
T Consensus 42 ~l~~~~~~---------~g~s~~~~g~~-~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------ 105 (394)
T PRK10213 42 LLTPMAQD---------LGISEGVAGQS-VTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA------ 105 (394)
T ss_pred hHHHHHHH---------cCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH------
Confidence 45555555 45555555544 445778888899999999999999999999988888776665442
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHH
Q 004750 612 SVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAV 691 (732)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~ 691 (732)
.+.+..++.-++.+.+.+. ..+....++.|.+|++.|+.+.++......+|..++|.+.+.+.+..||++.|++.++
T Consensus 106 --~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 182 (394)
T PRK10213 106 --NSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV 182 (394)
T ss_pred --ChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 1122333333333333333 3456667889999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCC
Q 004750 692 VCVISWIFVFIKVPETK 708 (732)
Q Consensus 692 ~~~i~~~~~~~~~~et~ 708 (732)
+++++.++....+||++
T Consensus 183 l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 183 MGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHCCCCC
Confidence 87777666666677764
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.24 E-value=1.6e-10 Score=122.57 Aligned_cols=164 Identities=17% Similarity=0.103 Sum_probs=122.6
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004750 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
..+....|.+.++. |.+..+. .++..+..++.+++.++.|+++||+|||+.+..+..+..++.+++.+..
T Consensus 11 ~~~~~~~~~~~~~~---------g~s~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDL---------GLSAAQY-GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HhhhHhHHHHHHhh---------CCChhhH-HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 44556666666654 4455444 4555678899999999999999999999999888877777766665521
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004750 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
+.+..++..++.+.+.+ ...+....+..|.+|++.|+.+.++......+|..+++.+.+.+.+..+|++.|
T Consensus 81 --------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 151 (399)
T TIGR00893 81 --------AYVSLYILRVLLGAAEA-PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAF 151 (399)
T ss_pred --------CHHHHHHHHHHHHHHHH-hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHH
Confidence 12233333334443333 334556678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004750 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
++.++++++..++.++..||++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 152 IIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHHhhheecCCCC
Confidence 99888888777777666776544
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.24 E-value=4.6e-10 Score=122.29 Aligned_cols=162 Identities=19% Similarity=0.183 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHhCCCCc--hhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 004750 23 ATIAGAVLYIKREFHLETE--PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLL 100 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s--~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLi 100 (732)
..+.+.++.+..+.+.+.+ ....+++.++..++..++.+++|+++||+|||+.+.++.++.+++.++..+.++.+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (408)
T PRK09874 236 GSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344455555454432111 12356677778888899999999999999999999999888888887777778888888
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 101 I~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l 180 (732)
+.+++.|++.+...+...+++.+..|+++||+..++.+....+|..++ +...+.+.+..+|++.|++.+++.++..++
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~g--p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTG--PLMGAAISANYGFRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhh--HHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 555566667789999999999888887766
Q ss_pred HHhhcc
Q 004750 181 TIFYLP 186 (732)
Q Consensus 181 ~~~~~~ 186 (732)
.++..+
T Consensus 394 ~~~~~~ 399 (408)
T PRK09874 394 SWNSLR 399 (408)
T ss_pred HHHHHH
Confidence 554443
No 140
>PRK10054 putative transporter; Provisional
Probab=99.24 E-value=4.4e-10 Score=124.14 Aligned_cols=168 Identities=13% Similarity=0.149 Sum_probs=120.1
Q ss_pred HhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHH
Q 004750 522 QLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVV 601 (732)
Q Consensus 522 ~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~ 601 (732)
...+......++|.++++ .+|++..+.+... .+..+..+++.++.|+++||+|||+.++.+..+..++.+.
T Consensus 19 ~~~g~~~~~~~l~~~l~~--------~~g~s~~~~g~~~-s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~ 89 (395)
T PRK10054 19 LTIGRGATLPFMTIYLSR--------QYSLSVDLIGYAM-TIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA 89 (395)
T ss_pred HHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Confidence 344556667778877765 3456665555554 4567888889999999999999999988888777666655
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004750 602 LVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
+.+.. +.+..++...+...++. ...+....+..|.+|++.|+++.|+.+....+|.+++|.+.+.+.+ .|
T Consensus 90 ~~~~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g 159 (395)
T PRK10054 90 IPLVN--------NVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHHh--------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 54421 11222222222222222 3345566778999999999999999999999999999999998875 78
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 682 LAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 682 ~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
|+.+|++.+++++++.++..+.+|+++
T Consensus 160 ~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 160 INLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999888888877666666666554
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.24 E-value=7.3e-10 Score=121.17 Aligned_cols=154 Identities=16% Similarity=0.113 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~ 104 (732)
+...+|.+.++.|. +..+.+++.+.+.++..++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+..+
T Consensus 239 ~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 239 LLNWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33456777788898 8889999999999999999999999999999999998877777777777777778888888888
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHH
Q 004750 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 105 l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
+.|++.+...+...+++.|.+|+++|+++.++.+....+|.+++ +...+.+.+. .+|...+.+.....++.+++.+
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAG--PLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHH--hhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 99998888889999999999999999999999999999999999 4444444444 3566677666665555444433
No 142
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.24 E-value=3.6e-10 Score=125.52 Aligned_cols=182 Identities=13% Similarity=0.079 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHH
Q 004750 509 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLL 588 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~ 588 (732)
+..++..++.++.+......+.+..|.+.++ +|.+..+.+. ...+..++..++.++.|++.||+|||+++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---------~~~s~~~~g~-~~s~~~~~~~~~~~~~g~l~dr~G~r~~~ 76 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKD---------LGLSATMFGL-AATLFYAAYVICGIPSNIMLAIIGARRWI 76 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhh---------cCCCHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhChHHHH
Confidence 3344444444444444444555566654454 4556555444 45567888999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHH
Q 004750 589 LSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDII 668 (732)
Q Consensus 589 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i 668 (732)
..+..+..++.+...+.. +.+..++.-++.+.+.+ +..+....++.|.+|++.|+.+.++.+....+|.++
T Consensus 77 ~~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 77 AGIMVLWGIASTATMFAT--------GPESLYLLRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877777665521 11222222233333333 233555567799999999999999999999999999
Q ss_pred HHhHHHHHHH------hhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 669 VTYSLPVLLN------SVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 669 ~~~~~~~l~~------~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
++.+.+++.+ ..||+++|++.++.+++..++.++++||++.
T Consensus 148 ~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 148 GLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 9999998875 3599999999888887777777777888764
No 143
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.24 E-value=4e-09 Score=119.87 Aligned_cols=176 Identities=17% Similarity=0.254 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHH----HHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004750 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMS----LIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~----~IG~~Ig~~~~g~LsDrfGrRkvLLigl 80 (732)
..+....++-.+..++.........++....++.+. ....+...... .+...+.++..|.++||+|||..+.+.+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDY-QLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCc-cchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 345556666666667766666666676666666422 22333333333 6777889999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHH--HhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004750 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFG--IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 81 lL~aIgslL~a~a~s~~lLiI~R~l~G~g--~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~ 158 (732)
+...+..+...+.. +| +++ +.|+. .+.......++++|....++|....++......++..++ +.......
T Consensus 100 ~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~--p~~~~~~~ 172 (463)
T KOG2816|consen 100 FGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG--PALGGYLV 172 (463)
T ss_pred HHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH--HHHHHHHH
Confidence 99888888777765 33 333 33332 344567788899999999999999999999999999998 55555555
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
...+.-.+|.+..+..++..+..++++||+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 667888899999998888888888999997
No 144
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=6.4e-10 Score=125.29 Aligned_cols=168 Identities=17% Similarity=0.087 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
.+++..++.......+...+| ++.+++|+ +..+.++..+.+.++..++.+++|+++||+|||+.+.+...+..++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 344445554444444555566 56677999 888999999999999999999999999999999887665544443332
Q ss_pred H--HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH-HHHHHHHHHHHHHhhc------
Q 004750 89 V--MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSLMT------ 159 (732)
Q Consensus 89 L--~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~-G~~ig~l~~l~~~l~~------ 159 (732)
+ ....++.+.+.+++++.|++.............|.+|++.||.+.++.+....+ |.+++ +...+.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~--~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFA--KVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHH--hhhHHHHhccccccc
Confidence 2 223456666778888888755444344446677999999999999999988886 76787 444444445
Q ss_pred ------cchhHHHHHHHHHHHHHHHHHH
Q 004750 160 ------APSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 160 ------~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
..+|+..|.+..+.+++.+++.
T Consensus 418 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 418 PIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred ccccccccChHHHHHHHHHHHHHHHHHH
Confidence 4689999998877777655443
No 145
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.23 E-value=9e-10 Score=123.12 Aligned_cols=163 Identities=15% Similarity=0.104 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hH--HHHH
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NV--YVLL 100 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~--s~--~lLi 100 (732)
+....|.+.+++|. +....++......++..++.+++|+++||+|||++++++.++.+++.+++.... +. ....
T Consensus 290 ~~~~~p~i~~~~g~--~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGA--STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 34456888888998 656666777778888899999999999999999999999999888877765432 11 1222
Q ss_pred HHHHHHHHHHhhH-hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HhhccchhHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLA-VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM----SLMTAPSWRLMLGVLFIPSL 175 (732)
Q Consensus 101 I~R~l~G~g~G~~-~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~----~l~~~~~Wr~~~~i~~~l~~ 175 (732)
++.++.+++.+.. .+....++.|.+|+++|+.++++.+....+|.++++...... ...+..+|++.|++.+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 3344444444432 367789999999999999999999999999998885333221 12345689999998888888
Q ss_pred HHHHHHHhhccCCc
Q 004750 176 IYFVLTIFYLPESP 189 (732)
Q Consensus 176 i~~~l~~~~~~esp 189 (732)
+.+++.+++.||++
T Consensus 448 ~~~~~~~~~~~e~~ 461 (479)
T PRK10077 448 LAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHhccccCC
Confidence 77777777788873
No 146
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.23 E-value=5.2e-10 Score=127.27 Aligned_cols=181 Identities=17% Similarity=0.094 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004750 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
..+..+++..+....-.+.++.-+|.+.++.+. +.. ...+....+.++...+.++.|+++||+|||++++
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~---------s~~-~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~ 75 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA---------SGN-ELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLM 75 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CHh-HHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445555565665555566677788988887554 333 3444555678888889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccC-CCccchhhHHHHHHHHHHHHHHH
Q 004750 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEI-FPTRVRGICIAICALVFWIGDII 668 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~gi~~~~~~ig~~i 668 (732)
.+..+..++.++..+.. +.+..++.-++.+++.+. ..+.......+. .|++.|+++.|+......+|..+
T Consensus 76 ~~~~~~~~~~~~~~~a~--------~~~~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 76 LGGTLFGLASLAAAFSP--------TASWLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877766521 122333333333333332 333333344454 47899999999999999999999
Q ss_pred HHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 669 VTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 669 ~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
+|.+.+++.+..||++.|++...++++..++..+.+|+.++
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999988888887777777887543
No 147
>PRK10504 putative transporter; Provisional
Probab=99.21 E-value=7.6e-10 Score=123.93 Aligned_cols=175 Identities=15% Similarity=0.112 Sum_probs=125.9
Q ss_pred HHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHH
Q 004750 515 VGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPI 594 (732)
Q Consensus 515 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~ 594 (732)
+.+..+........+..++|.+.++.|. +..+.+. ....+.++..++.++.|+++||+|||++++.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------s~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~ 84 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSLGE---------SPLHMHM-VIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVL 84 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCc---------CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 3334444444556677889998887654 4444444 44567788889999999999999999999888777
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHH
Q 004750 595 LITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLP 674 (732)
Q Consensus 595 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~ 674 (732)
..++.+...+. .+.+..++..++.+++.+ ...+....+..|.+|++.|+++.++.+....+|..++|.+.+
T Consensus 85 ~~~~~~~~~~~--------~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 85 FTLGSLFCALS--------GTLNELLLARVLQGVGGA-MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 66666544331 112222333333333333 234555677789999999999999999999999999999999
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 675 VLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 675 ~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.+.+..||++.|.+...+++++.+......|+.+
T Consensus 156 ~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 156 LLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999988888887777776666543
No 148
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.21 E-value=1.7e-09 Score=116.07 Aligned_cols=150 Identities=18% Similarity=0.243 Sum_probs=122.6
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004750 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~ 110 (732)
++.+++|. ++.+.+++.+...+...++.++.|++.||+|||+++.++.++..++.++..+.++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677898 8888999888887778888999999999999999998887776666666666778888888899999999
Q ss_pred hhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 111 G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
+...+....++.|..|+ +++.++++.+....+|..++ +.......+..+|+..|++.++++++..++ .++++
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g--~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 374 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIA--GSVGGILAERWSYHAVYWFAIVMLIVALFC-LLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHH--HHHHHHHHHhccchhHHHHHHHHHHHHHHH-Hheec
Confidence 99888888999999985 56799999999999999999 555555566779999999988887775554 34443
No 149
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.21 E-value=1e-09 Score=118.44 Aligned_cols=180 Identities=10% Similarity=0.102 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004750 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
+.+..+.+..+........+....|.+.++. |.+..+.+. +..+..++.+++.++.|+++||+|||+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~s~~~~g~-~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEF---------GLTTVDAAS-LISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCChhhHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3333444444444434555666667666654 455555444 455678999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 004750 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIV 669 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~ 669 (732)
.+..+..++.+++.+.. +.+..++..++.+.+.+ ...+....+..|.+|++.|+.+.++.+....+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 152 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAP--------GYITMFIARLVIGIGMG-GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVA 152 (405)
T ss_pred HHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHhhhh-hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 88877777666554421 12222233333333333 2334556778999999999999999999999999999
Q ss_pred HhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 670 TYSLPVLLNSVG--LAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 670 ~~~~~~l~~~~g--~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
+.+.+.+.+..+ |+..|++.++..++. ++....+||++.
T Consensus 153 ~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~ 193 (405)
T TIGR00891 153 AQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 999999988776 888887755544444 444556777643
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.20 E-value=1.6e-09 Score=122.92 Aligned_cols=180 Identities=13% Similarity=0.022 Sum_probs=116.2
Q ss_pred chhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccch
Q 004750 506 GVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRR 585 (732)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr 585 (732)
+.++....+.... +...........+.|.+.++. |++..+.+. +.....++.+++.++.|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---------gls~~~~g~-~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISF-FTCFVSTFAAAPLLPIIRDNL---------NLTKSDIGN-AGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHc---------CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3444444444433 333333445556666676654 455545444 45567788889999999999999999
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHH
Q 004750 586 TLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIG 665 (732)
Q Consensus 586 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig 665 (732)
+++..+..+..++.+++.+.. +....++..++.+ ++.+.......+++|.+|++.|+.+.|+.+....+|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~--------s~~~l~~~r~l~G--~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g 171 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVS--------SATGFIAVRFFIG--FSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLG 171 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHH--HHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHH
Confidence 998887777666655554421 1112222222222 222222223446789999999999999999888888
Q ss_pred HHHHHhHHHHHHH---------hhchhHHHHHHHHHHHHHHHHHHHhccC
Q 004750 666 DIIVTYSLPVLLN---------SVGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 666 ~~i~~~~~~~l~~---------~~g~~~~f~~~~~~~~i~~~~~~~~~~e 706 (732)
..+++.+.+.+.. ..||+++|++.++++++..++.+++.++
T Consensus 172 ~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~ 221 (476)
T PLN00028 172 GGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 8888877766543 1489999999998888776666654433
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.19 E-value=9.9e-10 Score=123.52 Aligned_cols=194 Identities=11% Similarity=0.100 Sum_probs=128.2
Q ss_pred ccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHH
Q 004750 494 AKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIA 573 (732)
Q Consensus 494 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~ 573 (732)
+++.++.+..++..++ .+..+.+..+........+....|.+.++. |.+..+.+.+ .....++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~s~~~~~~~-~~~~~~~~~~~~~ 73 (496)
T PRK03893 5 TQNIPWYRHLNRAQWK-AFSAAWLGYLLDGFDFVLITLVLTEVQGEF---------GLTTVQAASL-ISAAFISRWFGGL 73 (496)
T ss_pred CccccccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCCHHHHHHH-HHHHHHHHHHHHH
Confidence 4455666666554444 333343444433334455556667776654 4555555544 4456788889999
Q ss_pred HHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhh
Q 004750 574 VAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGI 653 (732)
Q Consensus 574 i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 653 (732)
+.|+++||+|||++++.+..+..++.+++.+.. +.+..++..++.+++. .+..+....+..|.+|++.|+.
T Consensus 74 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~ 144 (496)
T PRK03893 74 LLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP--------GYWTLFIARLVIGMGM-AGEYGSSATYVIESWPKHLRNK 144 (496)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHH
Confidence 999999999999999988877777776665521 1122222222222222 2334555677899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 654 CIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 654 ~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
+.++......+|.++++.+.+.+.+..||++.|++.++.+++ .++....+||++
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~ 198 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAE 198 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCch
Confidence 999999999999999999999999999999988864443333 333344456653
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.18 E-value=2e-10 Score=122.02 Aligned_cols=164 Identities=14% Similarity=0.073 Sum_probs=119.1
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
...+....|.+.++.| .+..+ ..++..+..++.+++.++.|+++||+|||++++.+..+..++.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~g---------~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIG---------LSKTD-LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred HHhhhhhhHHHHHHhC---------CCHhH-HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 3455666777776654 44444 4455567789999999999999999999999999888887777766653
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH-hHHHHHHHhhchhH
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVT-YSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~-~~~~~l~~~~g~~~ 684 (732)
. +.+..++..++.+.+.+ ...+....+..|.+|++.|+.+.++.+....+|.++++ .+.+.+.+..+|+.
T Consensus 81 ~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 81 T--------SLWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred h--------hHHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 1 11222222222222222 23456667889999999999999999999999999999 46666667789999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC
Q 004750 685 VFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.|++.++++++..++.++..||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCc
Confidence 999888888777777777777654
No 153
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.18 E-value=1.4e-09 Score=120.16 Aligned_cols=159 Identities=18% Similarity=0.108 Sum_probs=135.0
Q ss_pred HHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004750 26 AGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 26 ~~~~~~I~~~-lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~ 104 (732)
...+|.+.++ +|. +....|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3445666565 898 8889999999999999999999999999988888888888888888888888888888888899
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004750 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 105 l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
+.|++.+...+...+++.|.+|++.||+++++......+|..++ +...+.+.+..|++..+.+.+.+.++..++....
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g--~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG--AALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH--HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999988888888999999999999999999999999999999 5555666777788888888887777766666677
Q ss_pred ccCC
Q 004750 185 LPES 188 (732)
Q Consensus 185 ~~es 188 (732)
+++.
T Consensus 399 ~~~~ 402 (417)
T PRK10489 399 LGEL 402 (417)
T ss_pred cccc
Confidence 7766
No 154
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.18 E-value=1.4e-09 Score=120.99 Aligned_cols=152 Identities=16% Similarity=0.148 Sum_probs=113.6
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+++.+....... ..++.++..++.++.|+++||+|||++++.+..+..++.++..+. .+.+..++.-++.+
T Consensus 45 ~~~~~~~~~~~~-~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--------~~~~~l~~~r~l~G 115 (413)
T PRK15403 45 DFNADVSLAPAS-VSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT--------TSMTQFLIARFIQG 115 (413)
T ss_pred HhCCCHHHHHHH-HHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHH
Confidence 456666555444 456778889999999999999999999998877777666655542 11222222223333
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
++.+ ...+....+..|.+|++.++++.++.+....++..++|.+.+.+.+..||++.|++.+++.+++.++.++.+||+
T Consensus 116 i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 116 TSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3222 223445577889999999999999999999999999999999999888999999999988888877767778987
Q ss_pred CC
Q 004750 708 KG 709 (732)
Q Consensus 708 ~~ 709 (732)
+.
T Consensus 195 ~~ 196 (413)
T PRK15403 195 VK 196 (413)
T ss_pred cc
Confidence 54
No 155
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.17 E-value=1.7e-09 Score=114.59 Aligned_cols=163 Identities=13% Similarity=0.028 Sum_probs=116.0
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.......+|.+..+.+ .+.. ...++..+..+..+++.++.|+++||+|||++++.+..+..++.+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~---------~s~~-~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 15 TAITQVALPLYVLAGT---------GSAS-VLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHhh---------ccHH-HHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677776654 3333 44455567789999999999999999999999998887777666665553
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHH
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGV 685 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~ 685 (732)
.... ..+.+..++..++...+.+ ...+....+..|.+|++.|+.+.++.+....+|.+++|.+.+.+.+..||+..
T Consensus 85 ~~~~---~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~ 160 (365)
T TIGR00900 85 ALLG---GLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWA 160 (365)
T ss_pred HHcC---CCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 2211 0112222333333333332 23455567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004750 686 FGMYAVVCVISWIFVFI 702 (732)
Q Consensus 686 f~~~~~~~~i~~~~~~~ 702 (732)
|++.++.++++.++.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 161 IWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 98887777666555443
No 156
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.17 E-value=1.4e-09 Score=118.91 Aligned_cols=164 Identities=13% Similarity=0.105 Sum_probs=120.6
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004750 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
......+|.+.++.| .+..+.+ +......++.+++.++.|+++||+|||+.+..+..+..++.++..+..
T Consensus 20 ~~~~~~l~~~~~~~g---------~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~ 89 (382)
T PRK10091 20 FGIMGVLTELAHDVG---------ISIPAAG-HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS 89 (382)
T ss_pred HHHHhChHHHHHHcC---------CCHHHHh-HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 345556777776654 4444444 445567899999999999999999999999998888877776655421
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004750 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
+.+..++..++.+.+.+. ..+....+..|.+|++.|+.+.++......+|..+++.+.+.+.+..||+++|
T Consensus 90 --------~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f 160 (382)
T PRK10091 90 --------SYLMLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF 160 (382)
T ss_pred --------cHHHHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHH
Confidence 122222333333333332 23444566789999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004750 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
++.++++++..+..++.+||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc
Confidence 99998888777777777887643
No 157
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.16 E-value=5.6e-10 Score=117.82 Aligned_cols=151 Identities=23% Similarity=0.258 Sum_probs=110.9
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++|.+..+.+. +..+..+...++.++.|+++||+|||++++.+..+..++.++..+. .+.+..++..++.+
T Consensus 26 ~~~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~g 96 (352)
T PF07690_consen 26 ELGLSPSQIGL-LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------SNFWLLLIARFLLG 96 (352)
T ss_dssp CSTTTSHCHHH-HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------CCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------hhHHHHhhhccccc
Confidence 34555555454 4556788999999999999999999999999888888884444421 12222333333333
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
.+. ....+....++.|.+|++.|+.+.++.+....+|.++++.+.+.+.+..||+.+|++.+++++++.++...+++++
T Consensus 97 ~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 97 IGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred ccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 333 2345566778899999999999999999999999999999999999888999999999999999877655555544
Q ss_pred C
Q 004750 708 K 708 (732)
Q Consensus 708 ~ 708 (732)
+
T Consensus 176 ~ 176 (352)
T PF07690_consen 176 P 176 (352)
T ss_dssp S
T ss_pred c
Confidence 3
No 158
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.16 E-value=3.7e-09 Score=115.50 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~ 104 (732)
....+|.+.++.|. +..+.|++.+...++..+++++.|++.||+|+|+++..+.++.+++.+... + ......+.+
T Consensus 219 ~~~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~ 293 (381)
T PRK03633 219 LYGLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHH
Confidence 33456777777888 888999999999999999999999999999999999888888777665443 2 233445678
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 004750 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 105 l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l 180 (732)
+.|++.+..+|...+++.|..|+++++.+.+......++|.+++ |...+.+.+..+|++.|.+.+.+.++..++
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ig--p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLG--PSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88888888889999999999998888888888888899999999 566667777789999999988887765543
No 159
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.16 E-value=1.6e-09 Score=119.20 Aligned_cols=176 Identities=18% Similarity=0.170 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhH
Q 004750 513 VGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTI 592 (732)
Q Consensus 513 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~ 592 (732)
+...+..+..........+.+|.+.++. |.+..+ ..+...+..++.+++.++.|+++||+|||++++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~s~~~-~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~ 90 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKADL---------GLTDME-GAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSI 90 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHh---------CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 3333333333334455566666666654 445444 445556788999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004750 593 PILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 593 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
.+..++.++..+.. +.+..++.-++.+.+.+ +..+....++.|.+|++.|+++.++......+|.++++.+
T Consensus 91 ~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l 161 (426)
T PRK12307 91 VAYSVGTGLSGLAS--------GVIMLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYF 161 (426)
T ss_pred HHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHH
Confidence 88888777665531 12222222223222222 2345556778999999999999999999999999999999
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 673 LPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 673 ~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.+.+.+..||++.|++.+...+ ..++.....||++
T Consensus 162 ~~~l~~~~~w~~~f~i~~~~~~-~~~~~~~~~p~~~ 196 (426)
T PRK12307 162 MPSFAEAYGWRAAFFVGLLPVL-LVIYIRARAPESK 196 (426)
T ss_pred HHHHcccCCHHHHHHHHHHHHH-HHHHHHHHCCCCh
Confidence 9999898999999887443332 2223333345543
No 160
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.15 E-value=2e-09 Score=118.29 Aligned_cols=151 Identities=17% Similarity=0.151 Sum_probs=110.7
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
++.+..+.+.. .....++..++.++.|+++||+|||++++.+..+..++.+.+.... +.+..++..++.+.
T Consensus 43 ~~~s~~~~~~~-~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~ 113 (406)
T PRK15402 43 FNAGAEWVPTS-MTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--------SIEQFTLLRFLQGI 113 (406)
T ss_pred hCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHh
Confidence 44555444444 4567888999999999999999999999888877777666554421 11122222222222
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
+.+ ...+....++.|.+|++.|..+.++...+..++..++|.+.+.+.+..||+++|++.+++++++.+..++..||++
T Consensus 114 ~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 114 GLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred Hhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 222 2234556777899999999999999988888999999999999999899999999999888888777777788875
Q ss_pred C
Q 004750 709 G 709 (732)
Q Consensus 709 ~ 709 (732)
.
T Consensus 193 ~ 193 (406)
T PRK15402 193 G 193 (406)
T ss_pred c
Confidence 4
No 161
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.15 E-value=1.8e-09 Score=115.42 Aligned_cols=158 Identities=21% Similarity=0.180 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH--HH
Q 004750 14 GNLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL--VM 90 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~-~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl--L~ 90 (732)
..++.......+...+|.+. +++|. +..+.+++.+...++..++.+++|+++||+|||+.+.++..+..+..+ +.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLM 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444455566555 67888 788899999999999999999999999999999988766555444332 22
Q ss_pred Hh--hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccch-hHHH
Q 004750 91 LW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPS-WRLM 166 (732)
Q Consensus 91 a~--a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~-~~~~~~~G~~ig~l~~l~~~l~~~~~-Wr~~ 166 (732)
.+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++ |.....+.+..+ |++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~--p~~~g~l~~~~g~~~~~ 382 (394)
T TIGR00883 305 ALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFA--PYIAAALVAMTGDWYAI 382 (394)
T ss_pred HHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHH--HHHHHHHHHHcCcchhH
Confidence 22 24667777788999999999999999999999999999999998 456667788888 555555566666 8887
Q ss_pred HHHHHHHHH
Q 004750 167 LGVLFIPSL 175 (732)
Q Consensus 167 ~~i~~~l~~ 175 (732)
++...+.++
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 776665444
No 162
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.14 E-value=1.5e-09 Score=117.23 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=120.2
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004750 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
....+|.+.++. |++..+.+. ...+..++..++.++.|+++||+|||+++..+..+..++.+.+.+..
T Consensus 10 ~~p~~~~~~~~~---------~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-- 77 (377)
T PRK11102 10 YLPALPVIAADF---------GVSAGSVQM-TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-- 77 (377)
T ss_pred HhccHHHHHHHh---------CCCHHHHHH-HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--
Confidence 445566666654 445544444 45567889999999999999999999999988888777777665421
Q ss_pred hcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHH
Q 004750 609 KMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGM 688 (732)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~ 688 (732)
+.+..++..++.+.+.+ ...+....++.|.+|++.|+++.++.+....+|..++|.+.+.+.+..||+..|++
T Consensus 78 ------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 150 (377)
T PRK11102 78 ------TIDQLIYMRFLHGLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWV 150 (377)
T ss_pred ------cHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHH
Confidence 11222222233232222 23345567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCC
Q 004750 689 YAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 689 ~~~~~~i~~~~~~~~~~et~~ 709 (732)
.++++++..++..+.+||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 151 LALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHhCCccCc
Confidence 998888887777777787643
No 163
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.13 E-value=6.3e-09 Score=114.78 Aligned_cols=164 Identities=14% Similarity=0.075 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHH-HHHHHHHHHHHHHHh
Q 004750 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI-VSSVLYFIGGLVMLW 92 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLL-igllL~aIgslL~a~ 92 (732)
..++.......+...+|.+.+++|. +..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+++.+
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 230 VRIINTIGLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555667877788998 7888899999999999999999999999999988764 333333443333322
Q ss_pred -----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004750 93 -----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 93 -----a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~ 167 (732)
.++.+.++++.++.|++.+...+ ....+.|..| ++||++.++.+....+|..++ |.....+.+..||+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~g--p~i~g~l~~~~g~~~~~ 383 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLA--PAIAVLFIGFFGAIGVV 383 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHH--HHHHHHHHhhcchHHHH
Confidence 23567777889999998887655 4556677665 689999999999999999999 55556667778999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 004750 168 GVLFIPSLIYFVLTIF 183 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~ 183 (732)
++.+++.++..++.+|
T Consensus 384 ~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 384 WIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887776665443
No 164
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.13 E-value=5.7e-09 Score=114.34 Aligned_cols=152 Identities=13% Similarity=0.073 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004750 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 22 ~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI 101 (732)
...+....|...+++|. +..+.|++.+...++..++.++++++.||+|+|+.+.++.++.++..++.+++++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 33344455655577998 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 102 ~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
.+++.|+..|...+....++.+. |+++|+...++++ ...++|.+++ +...+.+.+..++ ..|.+.++++++.++
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g--~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIF--TAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999976 5678999999 5555666677786 667777777766443
No 165
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.12 E-value=3.8e-09 Score=115.47 Aligned_cols=182 Identities=12% Similarity=0.061 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 004750 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTL 587 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~ 587 (732)
+|.+++...+..+..+ .........|.+.++. |.+..+. .+...+..++..++.++.|+++||+|||+.
T Consensus 7 ~~~l~~~~~~~~~~~~-~~~~~~p~~~~i~~~~---------~~s~~~~-~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~ 75 (394)
T PRK11652 7 VNLLFMLVLLVAVGQM-AQTIYVPAIADMARDL---------NVREGAV-QAVMAAYLLTYGLSQLFYGPLSDRVGRRPV 75 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHh---------CCCHHHH-HHHHHHHHHHHHHHHHhhhhHHHhcCChHH
Confidence 4444444444443332 2222333456666554 4555444 444556889999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 004750 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDI 667 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~ 667 (732)
++.+..+..++.+..... + +.+..++..++.+++.+ ...+....+..|.++.+.++.+.++.+....++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~---~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (394)
T PRK11652 76 ILVGMSIFILGTLVALFA-----H---SLTVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPL 146 (394)
T ss_pred HHHHHHHHHHHHHHHHHH-----c---cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 988877776666554431 0 11122222222222222 12344456678889989999999999999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
++|.+.+.+.+..||+.+|++.++.+++..++..+.+||++.
T Consensus 147 ~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 147 LAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999999998999999999888777766666667787653
No 166
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=1.8e-09 Score=118.85 Aligned_cols=163 Identities=13% Similarity=0.071 Sum_probs=114.6
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004750 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
..+...+|.+.++. |++..+.+. +...+.++..++.+..|++.||+|||++++.+......+.+. ...
T Consensus 8 ~~~~~~lp~i~~~~---------~~s~~~~g~-~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~-~~~- 75 (368)
T TIGR00903 8 VTFSPVLSLVAEDI---------DVSKEELGL-LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGR-LLD- 75 (368)
T ss_pred HHHHhhHHHHHHHh---------CcCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHH-
Confidence 44556777777764 455544444 455678889999999999999999998766554433332211 110
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004750 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
. .+....++.-++.+.+. +.........+|.+|++.|+++.++......+|..+++.+.+++.+..||+..|
T Consensus 76 ~------~~~~~l~~~R~l~G~g~--~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f 147 (368)
T TIGR00903 76 P------FNYEWLLACQLLAALGQ--PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLI 147 (368)
T ss_pred h------ccHHHHHHHHHHHHhHh--HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 0 01222223333333332 223333445589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004750 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
++.++++++..++.++++||++.
T Consensus 148 ~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 148 IPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999988888888888888643
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.11 E-value=1.8e-09 Score=121.76 Aligned_cols=160 Identities=8% Similarity=0.017 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh--CChHHHHH--HHHHHHHHHHHH
Q 004750 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPMLIV--SSVLYFIGGLVM 90 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf--GrRkvLLi--gllL~aIgslL~ 90 (732)
.++...........+|.+.+++|. +..+.+++.++..++..++++++|+++||. ++|+...+ +.++.+++.+++
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~ 327 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC 327 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 333344433444456666778898 889999999999999999999999999984 33433333 334444555566
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHH
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGV 169 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~-~Wr~~~~i 169 (732)
...++++.+++.+++.|++.+...+...+++.|.+|+++++..+++.+...++|.+++ +...+.+.+.. +|++.|++
T Consensus 328 ~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig--p~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 328 ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIG--PPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcc--ccceeeeehhcCCcchHHHH
Confidence 6678888889999999999999999999999999999999999999999999999999 55555555554 69999999
Q ss_pred HHHHHHHHH
Q 004750 170 LFIPSLIYF 178 (732)
Q Consensus 170 ~~~l~~i~~ 178 (732)
.+++.++..
T Consensus 406 ~~~~~li~~ 414 (455)
T TIGR00892 406 SGSIVVSAG 414 (455)
T ss_pred hhHHHHHHH
Confidence 888766544
No 168
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=5.5e-09 Score=115.98 Aligned_cols=162 Identities=19% Similarity=0.194 Sum_probs=132.3
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004750 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
.-+.+.-.+|.+.++.+ ++..+.++++ .++.++..++.++...+.+|+.||++++..+.+++++.++..+
T Consensus 28 tEfv~~gLLp~iA~dl~---------vs~~~aG~li-s~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al 97 (394)
T COG2814 28 TEFVPVGLLPPIAADLG---------VSEGAAGQLI-TAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL 97 (394)
T ss_pred HHHHHHhchHHHHHHcC---------CCHHHHHHHH-HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777654 5555555555 4689999999999999999999999999999999999988887
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004750 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
... .+..++.=++.....+ .+.++...+..++.|+++|+.++++......+...++.++..++-+..||+.
T Consensus 98 Ap~--------f~~Ll~aR~~~g~a~G-~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 98 APS--------FAVLLLARALAGLAHG-VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred hcc--------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 422 2233333344444333 4556677888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 004750 685 VFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~~~~ 705 (732)
+|+..+++++++.+..+..+|
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999
No 169
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.11 E-value=1.2e-08 Score=114.92 Aligned_cols=156 Identities=19% Similarity=0.289 Sum_probs=117.1
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHHHHHHHHHHHHHHHHhh----hhHH
Q 004750 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIVSSVLYFIGGLVMLWS----PNVY 97 (732)
Q Consensus 27 ~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG-----rRkvLLigllL~aIgslL~a~a----~s~~ 97 (732)
...|++++++|+ ++++...+.++..+... .-+++|.++|-+- ||+-++++.++.+++.+..+.. .+..
T Consensus 11 ~~~~~l~~~l~l--s~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGL--SPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAA 87 (433)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhh
Confidence 456789999999 88998888888777754 4578899999873 4555666776665555555543 3466
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhcCC--cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 004750 98 VLLLARLLDGFGIGLAVTLVPIYISETAP--PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSL 175 (732)
Q Consensus 98 lLiI~R~l~G~g~G~~~~~~~alIaE~fP--~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~ 175 (732)
...+.-++..+|.+...++.-+++.|... ++.||...+.......+|.+++... .+...+..++|..|.+.+++.+
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l--~G~l~~~~~~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLL--SGPLLDSFGPQGVFLISAALPL 165 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh--hhhhhhcCCCeEEehHHHHHHH
Confidence 66677788899999999999999999983 3337788888888888999998433 4555667789999999888877
Q ss_pred HHHHHHHhhccC
Q 004750 176 IYFVLTIFYLPE 187 (732)
Q Consensus 176 i~~~l~~~~~~e 187 (732)
+.++..+++.+|
T Consensus 166 l~~~~~~~~~~e 177 (433)
T PF03092_consen 166 LMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHhhhh
Confidence 766666666665
No 170
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.10 E-value=2.9e-09 Score=118.87 Aligned_cols=153 Identities=16% Similarity=0.097 Sum_probs=107.0
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHH
Q 004750 550 GISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCC 629 (732)
Q Consensus 550 ~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (732)
|++..+. .+...+..++..++.++.|+++||+|||++++.+..+..++.+.+...... ........+..++...+
T Consensus 57 g~s~~~~-g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 57 GFSKGEL-GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAIMFVLLFLNGWF 131 (438)
T ss_pred CCCHhHh-HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHHHHHHHHHHHHH
Confidence 3444444 445557789999999999999999999998888777777666654432100 00111112222233333
Q ss_pred HhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH-hhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 630 FVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN-SVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 630 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.+.. .+.......|.+|++.|+++.++.+....+|+.+++.+.+...+ ..||+.+|++.++++++..++.++++||++
T Consensus 132 ~g~~-~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 132 QGMG-WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred hhcc-hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 3322 23445667899999999999999999999999999988876554 468999999999988887777777777754
No 171
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.09 E-value=5.9e-09 Score=115.39 Aligned_cols=164 Identities=15% Similarity=0.126 Sum_probs=117.7
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004750 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
+.+.+..+++.++.+ ++|.+....+.. ..+..+...+..++.|+++||+|||++++.+..+..++++.+..
T Consensus 25 ~~~~~~~~~~~~~~~--------~~g~s~~~~gl~-~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 25 GFFVVFPLISIRFVD--------QLGWAAVMVGIA-LGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHH--------HhCCcHHHHHHH-HHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 445556667766644 345566555544 44567777778899999999999999999988888887776654
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004750 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
. .+.+...+..++.+++.+ ...+....+..+.+|++.|+++.|+......+|..++|.+.+++. ..||++
T Consensus 96 ~--------~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~ 165 (400)
T PRK11646 96 A--------HEPWLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRL 165 (400)
T ss_pred h--------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 2 112222222222222222 233445677789999999999999999999999999999999998 679999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC
Q 004750 685 VFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~~~~et 707 (732)
.|++.+++++++.++..+.+||.
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcc
Confidence 99988888777766666666764
No 172
>PRK03699 putative transporter; Provisional
Probab=99.09 E-value=7.2e-09 Score=113.84 Aligned_cols=163 Identities=17% Similarity=0.070 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~-~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a 91 (732)
++.++.......+...+|.+. +.+|+ +..+.+++.+.+.++..++.+++|+++||+++|+++.....+.+++.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 333333333334445566544 67899 888999999999999999999999999999999999888877777766766
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004750 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
..++.+.+.+..++.|++.+..++...++..+..| ++++...++......+|.+++ |.....+.+..||+..+++.+
T Consensus 290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~--p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLT--FVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHH--HHHHHHHHHHhCchhhhhhhH
Confidence 77777777778889999988888888888888776 446777888888889999999 555566667789999999888
Q ss_pred HHHHHHHHH
Q 004750 172 IPSLIYFVL 180 (732)
Q Consensus 172 ~l~~i~~~l 180 (732)
++.++.+++
T Consensus 367 ~~~~~~~~~ 375 (394)
T PRK03699 367 GLYAVVFVM 375 (394)
T ss_pred HHHHHHHHH
Confidence 877776554
No 173
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.09 E-value=8.7e-09 Score=113.55 Aligned_cols=165 Identities=21% Similarity=0.250 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh-hHH
Q 004750 19 GWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP-NVY 97 (732)
Q Consensus 19 ~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~-s~~ 97 (732)
......+...+|.+.+++|. +..+.|++.+.+.++..++.+++|++.||+|||+.+.++..+.+++.++..+.+ +..
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 295 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLP 295 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHH
Confidence 33333444556666667888 888999999999999999999999999999999999988888777766555433 222
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Q 004750 98 VLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGVLFIPSL 175 (732)
Q Consensus 98 lLiI~R~l~G~g~G~~~~~~~alIaE~fP-~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~-~Wr~~~~i~~~l~~ 175 (732)
.+ .-++.|++.+...+.......+.++ +++|++..++.+....++..++ +.....+.+.. +|...|.+.++.++
T Consensus 296 ~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~g--p~~~G~l~~~~g~~~~~~~~~~~~~~ 371 (393)
T PRK09705 296 VL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLA--PWFSGVLRSISGNYLMDWAFHALCVV 371 (393)
T ss_pred HH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 22 2356788888888877777777775 6789999999999999999988 44455555554 48888888888888
Q ss_pred HHHHHHHhhccCCc
Q 004750 176 IYFVLTIFYLPESP 189 (732)
Q Consensus 176 i~~~l~~~~~~esp 189 (732)
+..++..++.||++
T Consensus 372 ~~~~~~~~~~~~~~ 385 (393)
T PRK09705 372 GLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHHhccccc
Confidence 77777777888874
No 174
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.08 E-value=5.7e-09 Score=111.85 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=112.0
Q ss_pred hhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHH
Q 004750 523 LSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVL 602 (732)
Q Consensus 523 ~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~ 602 (732)
+.....+..+.|.++++ ++|++..+.+. +..+..++.+++.++.|+++||+|||+.++.+..+..++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKD--------DLGLSTAQLGN-LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHhHHhhhHHHHH--------HhCCCHHHhhH-hhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 33445566777753332 34566655444 4556889999999999999999999999999888888877766
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh---
Q 004750 603 VLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS--- 679 (732)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~--- 679 (732)
.+... +.+..++..++.+.+ .+..+....++.|.+|++.|+.+.++......+|..+++.+.+.+...
T Consensus 85 ~~~~~-------~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 155 (366)
T TIGR00886 85 GLAVQ-------SYSVLLLLRLFIGIA--GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIF 155 (366)
T ss_pred HHHhh-------hHHHHHHHHHHHHHh--chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 55310 111222222222222 223344567789999999999999999988888888888888877653
Q ss_pred -------hchhHHH-HHHHHHHHHHHHHHHHhccCC
Q 004750 680 -------VGLAGVF-GMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 680 -------~g~~~~f-~~~~~~~~i~~~~~~~~~~et 707 (732)
.+|++.| +..+++.++..++.+...+|+
T Consensus 156 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 156 GAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3788888 444555555555555555554
No 175
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.08 E-value=2.1e-09 Score=97.52 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhc
Q 004750 564 TTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCS 643 (732)
Q Consensus 564 ~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (732)
..++.+++.++.+++.||+|||+.+..+..+..++.+.+... .+.+...+..++...+.+ ...+..+.+..
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~ 77 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--------SNITVLIIARFLQGFGAA-FALVAGAALIA 77 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHH-HHHHhHHHHHH
Confidence 456777889999999999999999888777776666554431 112222333333333333 23455667789
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 644 EIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 644 e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
|.+|++.|+++.++.+....+|..+++.+.+.+.+..+|+..+++.+.+++++.++.++..|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999988999999999888888887777777764
No 176
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=5.9e-09 Score=119.39 Aligned_cols=174 Identities=19% Similarity=0.202 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcc-cchhH
Q 004750 509 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDIS-GRRTL 587 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~-grr~~ 587 (732)
+.+...+.......+ .++++..++|.++.+ .+|++..+ +..+..++.+...++.+++|+++||+ |||++
T Consensus 9 ~~l~~l~~~~~~e~f-s~Yg~~~~L~~yL~~--------~lgls~~~-a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYF-SFYGMRALLILYLTN--------QLKYDDNH-AYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------hcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 334444444433333 467788899988876 24555544 44445667788889999999999998 99999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCcc--chhhHHHHHHHHHHHH
Q 004750 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTR--VRGICIAICALVFWIG 665 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~gi~~~~~~ig 665 (732)
++.+..++.++.+++.... .......+.+.+..++.+. ..+...++.+|.+|++ .|.++.++.....++|
T Consensus 79 iliG~il~~lg~lll~~~~-------~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASE-------IHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HHHHHHHHHHHHHHHHHhh-------cchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 9998888887776554310 0011122222222223222 2344457789999986 6999999999999999
Q ss_pred HHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q 004750 666 DIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFV 700 (732)
Q Consensus 666 ~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~ 700 (732)
++++|.+.+++.+..||+..|.+.++..+++.+..
T Consensus 151 ~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 151 SIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998766555554443
No 177
>PRK09952 shikimate transporter; Provisional
Probab=99.08 E-value=2e-08 Score=112.58 Aligned_cols=156 Identities=13% Similarity=0.144 Sum_probs=109.9
Q ss_pred HHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHH
Q 004750 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW---S-PNVYVLLLARLL 105 (732)
Q Consensus 30 ~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~---a-~s~~lLiI~R~l 105 (732)
+++.+++|. +......+..+..+...++.+++|+++||+|||++++.+.++.+++.+.+.. . ++.+.+++..++
T Consensus 275 ~y~~~~~g~--s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 275 NYSTQNLGL--PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 356677888 6665555566666777888999999999999999998887766555443322 1 234444556677
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004750 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 106 ~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
.|++.+...+...+++.|.+|.+.|+...++.. .+..+|..+++............+|+..+...+++.++.++.. +.
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~ 431 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HH
Confidence 788888888888999999999999998888854 4455788888444333222223358988888888777766554 45
Q ss_pred ccCC
Q 004750 185 LPES 188 (732)
Q Consensus 185 ~~es 188 (732)
++|+
T Consensus 432 ~~~~ 435 (438)
T PRK09952 432 MKDN 435 (438)
T ss_pred cccc
Confidence 5664
No 178
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.02 E-value=3e-08 Score=111.32 Aligned_cols=168 Identities=18% Similarity=0.095 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh--CChHHH-HHHHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPML-IVSSVLYFIGGL 88 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~-~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf--GrRkvL-LigllL~aIgsl 88 (732)
+..++.......+...+|.+.+ ++|+ +..+.+++.+++.++..++.+++|+++||+ |||+.. .....+..++.+
T Consensus 260 l~~~~~~~~~~~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 260 IANVFVYLLRYGILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 3333333333344456666554 5788 778899999999999999999999999999 555432 222233333333
Q ss_pred HHHh--hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHH-HHHHHHHHHhhccchhHH
Q 004750 89 VMLW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL-AYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 89 L~a~--a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~i-g~l~~l~~~l~~~~~Wr~ 165 (732)
+..+ ..+.+.++++.++.|.+..........+..|.+|++.||.++++.+....+|..+ + +.......+..||+.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g--~~v~g~l~~~~g~~~ 415 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA--SAIVGYTVDFFGWDG 415 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh--hhhHHHHHHHhcchH
Confidence 2222 2344444555556665443333344456789999999999999998887777654 5 444455566778999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 004750 166 MLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~ 184 (732)
.|++.+..+++.+++.+++
T Consensus 416 ~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 416 GFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888877766555444
No 179
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.01 E-value=1.4e-08 Score=115.59 Aligned_cols=164 Identities=19% Similarity=0.170 Sum_probs=118.0
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHH
Q 004750 519 ILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILIT 597 (732)
Q Consensus 519 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i 597 (732)
.+..-.+++++..++|.++.+.+ .+|++..+.+. +..++.+...++.+++|+++|| +|||++++.+..+..+
T Consensus 19 ~~~~~~~~~~~~~~L~~yl~~~~------~lg~s~~~ag~-~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 19 ELWERFSYYGMQGILAVYLVQQA------GLGFSQEQAFI-IFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC------CCCCCHHHHHH-HHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 33333456777888999887621 25566655554 4556788999999999999999 8999999999988888
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccc---hhhHHHHHHHHHHHHHHHHHhHH
Q 004750 598 SLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRV---RGICIAICALVFWIGDIIVTYSL 673 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~---r~~~~gi~~~~~~ig~~i~~~~~ 673 (732)
+.+++.+.. +.+..++..++ .+.+.+ ..+....+.++.+|++. |+.+.++.+...++|.+++|.+.
T Consensus 92 g~~~~~~~~--------~~~~~~~~~~l--~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 92 GHFMLAMSI--------YPDLIFYGLGT--IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHhcc--------cHhHHHHHHHH--HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 877666521 11122222222 233333 34555677789998754 88899999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHH
Q 004750 674 PVLLNSVGLAGVFGMYAVVCVISWIF 699 (732)
Q Consensus 674 ~~l~~~~g~~~~f~~~~~~~~i~~~~ 699 (732)
+++.+..||+..|.+.++.++++.+.
T Consensus 162 g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999877666555433
No 180
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.01 E-value=6.1e-09 Score=115.38 Aligned_cols=182 Identities=15% Similarity=0.140 Sum_probs=133.4
Q ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 004750 507 VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRT 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~ 586 (732)
++...++++++.....+..=..++.-.|.+.++.| +|.++.+. +.....+.--++-++.|.++||.+.|.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~---------lsk~~lG~-i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGG---------LSKTQLGI-LGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcC---------CCHHHHHH-HHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 34445555554444333333455666677777654 44444444 445577888889999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHH
Q 004750 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGD 666 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~ 666 (732)
.+..++++..+..+++.++.. ..+..++..+-+.+-++++.|. .-.++.-+|++.||+..++-+.++++|+
T Consensus 96 fm~~gLilsai~nil~Gfs~s--------~~~~~~l~~lng~fQg~Gwpp~-~~~i~~Wfsr~eRG~~~siWn~shNiGG 166 (448)
T COG2271 96 FMAFGLILSAIVNILFGFSPS--------LFLFAVLWVLNGWFQGMGWPPC-ARTITHWFSRKERGTWWSIWNTSHNIGG 166 (448)
T ss_pred eehHHHHHHHHHHHHHhhhhH--------HHHHHHHHHHHHHHhcCCCcHH-HHHHHHHcCccccCceEEEehhhhhccc
Confidence 999999999998888888431 1122233333334445555444 4566899999999999999999999999
Q ss_pred HHHHhHH--HHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 667 IIVTYSL--PVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 667 ~i~~~~~--~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
.+.|.+. +++..+.+|+..|++-++++++..+++++.+++|
T Consensus 167 al~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~ 209 (448)
T COG2271 167 ALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDR 209 (448)
T ss_pred chHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999 8998888999999999999999888888877544
No 181
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.01 E-value=2.4e-08 Score=109.46 Aligned_cols=141 Identities=13% Similarity=0.239 Sum_probs=119.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al 120 (732)
+....|++.++..+...++.++.|++.||+|+|+.+.++.++.+++.++..++++.+.+++.+++.|++.+........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999888888887888899988999999999988777777778
Q ss_pred HHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 004750 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 121 IaE~fP~k~RG~~~~~-~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
+.+..+++.++...+. .+....+|.+++ +...+.+.+..||+.+|.+.+++.++...+..+
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~--~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFL--STLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHH--HHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888887766 577889999999 555566666779999999999988876665544
No 182
>PRK15075 citrate-proton symporter; Provisional
Probab=99.01 E-value=3.9e-08 Score=109.75 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH-HH---h
Q 004750 18 QGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV-ML---W 92 (732)
Q Consensus 18 ~~~~~~~~~~~~~~I~~-~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL-~a---~ 92 (732)
.......+....|.+.+ .+|+ +..+.+++...+.++..++.+++|+++||+|||++++++.++.++..+. .. .
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 327 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 33333444455666554 4798 7788889988999999999999999999999999888765544332221 11 1
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccchhH
Q 004750 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 93 a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~-~~~~G~~ig~l~~l~~~l~~~~~Wr 164 (732)
.+++..+.+..++.|++.+...+....++.|.+|++.|+...++... +..++..++ |.....+.+..|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~--p~~~g~i~~~~g~~ 398 (434)
T PRK15075 328 APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFT--PAISTWLIHVTGDK 398 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhH--HHHHHHHHHhcCCc
Confidence 23444444556667777777777777889999999999999998543 344445666 44445555555654
No 183
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=3.1e-08 Score=108.57 Aligned_cols=146 Identities=14% Similarity=0.102 Sum_probs=104.5
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++|.+..+.+. ...+..++..++.++.|+++||+|||++++.+..+..++.+.+.+.. +.+..++..++.+
T Consensus 35 ~~~~s~~~~g~-~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G 105 (401)
T PRK11043 35 DLQTSASAVSA-SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--------SAAQLLVLRFVQA 105 (401)
T ss_pred HHCCCHHHHHH-HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHH
Confidence 34566654444 45567899999999999999999999999888777766665554421 1122222222222
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHh
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIK 703 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 703 (732)
.+.+ ...+....+..|.+|++.++...+..+....++..++|.+.+++.+..||+..|++.+++.++..+..+..
T Consensus 106 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 106 VGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred hhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 2222 12233446678999999899999999888999999999999999999999999998888877776555443
No 184
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=1.3e-08 Score=115.96 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchhH---------HHH-HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTI---------EGL-IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~---------~gl-l~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
+.++...+....+....|.+.++.|.+.+... ... ...+..++..++.+++++++||+|||++++++.++
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~ 374 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFI 374 (502)
T ss_pred HHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHH
Confidence 33333333333333346777788887321100 011 23344556677888999999999999999988888
Q ss_pred HHHHHHHHHhhhh----HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004750 83 YFIGGLVMLWSPN----VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 83 ~aIgslL~a~a~s----~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~ 158 (732)
.+++.++.++..+ ...+.+.-+...++..+..+....+..|.+|.+.|+++.++.+....+|.++++... ....
T Consensus 375 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~--~~l~ 452 (502)
T TIGR00887 375 LTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGF--LYLA 452 (502)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHh--hhhh
Confidence 7777665554321 111111111222222233456677789999999999999999999999999985443 3333
Q ss_pred cc----------chhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 159 TA----------PSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 159 ~~----------~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+. .++...|++.++++++..++ ++++||+
T Consensus 453 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 453 QHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred ccccccccccccccchHHHHHHHHHHHHHHHH-heEeccC
Confidence 31 34566777777777765544 5678998
No 185
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.98 E-value=6.2e-08 Score=106.06 Aligned_cols=146 Identities=13% Similarity=0.062 Sum_probs=118.4
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 004750 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLD 106 (732)
Q Consensus 27 ~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~ 106 (732)
..+|.+.++.|. +..+.|++.+...++..+..++.|++.||+|+|+.+.++.++.+++.++..+.++.+.+++..++.
T Consensus 226 ~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (382)
T PRK11128 226 GFSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH 303 (382)
T ss_pred HHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 334445567888 888899999999999999999999999999999999999999998888888889999999999999
Q ss_pred HHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004750 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 107 G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
|++.+...+....++.+. ++++++.+.++.. ....+|..++ +...+.+.+..++ ..++..+++.++.+
T Consensus 304 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig--~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 304 CGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIM--TVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 999999999999998887 5666788888875 5567777888 5555666677677 46666666655433
No 186
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.97 E-value=2.9e-08 Score=114.71 Aligned_cols=155 Identities=18% Similarity=0.169 Sum_probs=133.5
Q ss_pred HHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004750 23 ATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 23 ~~~~~~~~~I~-~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI 101 (732)
..+...+|.+. +.+|. +....|++.+++.+|.+++.++.+++.+|+++++.+..+.++++++.+..+++++.+..++
T Consensus 235 ~a~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~ 312 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALI 312 (524)
T ss_pred hHHHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 33445577665 46788 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 004750 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 102 ~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
+-++.|++.....+...+.+.+..|++.||++++++++....+..+| ....+.+.+..|-+..+.+.++..++..++.
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lG--sll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLG--SLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998 4455666777788888887776555544443
No 187
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=5.1e-08 Score=110.91 Aligned_cols=188 Identities=14% Similarity=0.041 Sum_probs=120.5
Q ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 004750 507 VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRT 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~ 586 (732)
..++.+....+.+...+.....+....+.+-+. +++++.++.+.+.+ +..+...++.+..|++.||+|.|+
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~--------~~~ls~~q~g~l~a-i~~l~~al~rip~G~l~Dr~G~R~ 101 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKI--------GFNFTTDQLFLLTA-LPSVSGALLRVPYSFMVPIFGGRR 101 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCChH
Confidence 344555555555555544333333333333331 46677776666655 567777788888999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHH
Q 004750 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGD 666 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~ 666 (732)
++..++.+..+..+.+.+.... ...+.+..++.-++.+. +.+..+.....+++.+|++.||++.|+....+.+|.
T Consensus 102 v~~~~~ll~~i~~~~~~~a~~~---~~~s~~~lli~r~l~Gi--gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~ 176 (462)
T PRK15034 102 WTVFSTAILIIPCVWLGIAVQN---PNTPFGIFIVIALLCGF--AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGV 176 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc---cCCCHHHHHHHHHHHHH--HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHH
Confidence 9988888877776655542110 00112222222222222 233445556778999999999999999987888888
Q ss_pred HHHHhHHHHHH-----H-------------hhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 667 IIVTYSLPVLL-----N-------------SVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 667 ~i~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.+++++.+.+. . ..+++.++++++.+.++..++.++++++.+
T Consensus 177 ~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 177 SVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 87777776644 2 334777778888888877777777666543
No 188
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=2.1e-08 Score=124.35 Aligned_cols=155 Identities=21% Similarity=0.221 Sum_probs=125.1
Q ss_pred HHHHHHhCCCCchh-HHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q 004750 30 LYIKREFHLETEPT-IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGF 108 (732)
Q Consensus 30 ~~I~~~lgl~~s~s-~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~ 108 (732)
+++.+.+|+ +.. ..|++.++..++.+++++++|+++||+++++++.++.++.+++.++..+..+.+.++++.++.|+
T Consensus 257 ~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 257 AYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred HHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 456677898 777 89999999999999999999999999999999999988888888888888888888899999999
Q ss_pred HHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004750 109 GIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 109 g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
+.++..+...+++.+.+|++.||.++++.++...+|.++++....... ....++...|++.+.++++..++.++++|+
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS-GLGLSPAGLFYLIALVTLIGTLYTLLLLPD 412 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-HhccCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999999999877744432221 123456667766666555544444444443
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.96 E-value=3.8e-08 Score=108.57 Aligned_cols=113 Identities=19% Similarity=0.336 Sum_probs=95.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHhHHHHH
Q 004750 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-PNVYVLLLARLLDGFGIGLAVTLVPI 119 (732)
Q Consensus 41 s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a-~s~~lLiI~R~l~G~g~G~~~~~~~a 119 (732)
+....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.++..+. .+.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567788888899999999999999999999999999988888887776664 35667777888999999999999999
Q ss_pred HHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004750 120 YISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 120 lIaE~fP-------~k~RG~~~~~~~~~~~~G~~ig~l~~l 153 (732)
+++|..+ ++++|.+.++.++...+|..+++....
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g 375 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVG 375 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998875 556799999999999999999954443
No 190
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.95 E-value=6.2e-08 Score=111.07 Aligned_cols=168 Identities=18% Similarity=0.218 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHH
Q 004750 511 LMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLL 589 (732)
Q Consensus 511 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~ 589 (732)
+...+....+.. .+++.+..+++.++.+ .+|.+.++....... .........+++|++.|| +|||++++
T Consensus 23 ~~~~~~~~~~~~-~~~y~~~~~l~~yl~~--------~lg~s~~~a~~~~~~-~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 23 FYLIFSIELWER-FGYYGLQGIMAVYLVK--------QLGMSEADSITLFSS-FSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 333333333333 3456677788888864 355655554444433 444444445689999999 59999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccc--hhhHHHHHHHHHHHHHH
Q 004750 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRV--RGICIAICALVFWIGDI 667 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ig~~ 667 (732)
.+..+..++.+++.+.. .......+..++.+.+.+. ..+....+..|.+|++. |..+.++.+.+.++|.+
T Consensus 93 ~g~~~~~ig~~l~~~~~-------~~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 93 LGAIVLAIGYALVAWSG-------HDAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred HHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 99888887766665421 0111122222233333222 34455577899998653 45678888999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHH
Q 004750 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVIS 696 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~ 696 (732)
++|.+.+++.+..||+..|++.++..+++
T Consensus 165 ~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 165 FSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 99999999999999999999877544444
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.95 E-value=3.8e-08 Score=108.77 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....++...+.+...+..++.|++.||+|||++++.+..+..++.+.+.... . . ++..++. .......
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~---------~-~-~~~r~l~-G~~~a~~ 105 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI---------H-P-LLAYGLV-GIGAAAY 105 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH---------H-H-HHHHHHH-HHHHHHH
Confidence 3445556678899999999999999999999999999888877665543311 1 1 2222222 2223344
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.|....++.|++|++.|+++.|+.+....++.+++|.+.|++.+.. +...+++.+.+.+++ ++..+.+||.+
T Consensus 106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 5677788899999999999999999999999999999999999854 666665555444444 33445677654
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=4.8e-08 Score=121.75 Aligned_cols=147 Identities=13% Similarity=0.032 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....+...++.+..+++.+++|+++||+|||+++.....+.++...+..+.... +....++...+........+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~------~s~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL------NSVPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHhh
Confidence 445555666778888999999999999999997644333222222221211110 11222222222323333345
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
.+....++.+++|++.|+.++|+.++...+|.+++|.+.|++....||+..|+..+++.++ .+++.+++|+++
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTG 198 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCC
Confidence 6777888899999999999999999999999999999999999999998888444444343 344455566654
No 193
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.92 E-value=5.8e-08 Score=111.15 Aligned_cols=168 Identities=16% Similarity=0.238 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchh
Q 004750 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRT 586 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~ 586 (732)
.+..++.++....-.+ +++++..+++.++.+ .+|.+.... ..+...+........+++|+++|| +|||+
T Consensus 13 p~~~~~~~~~~~~er~-~~y~~~~~l~~yl~~--------~lg~~~~~a-~~i~~~~~~~~~~~~~~~G~laDr~~G~r~ 82 (489)
T PRK10207 13 PRPFFMIFFVELWERF-GYYGVQGILAVFFVK--------QLGFSQEQA-FITFGAFAALVYGLISIGGYVGDHLLGTKR 82 (489)
T ss_pred ChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HcCCCHHHH-HHHHHHHHHHHHHHHhhHHHhhhhccchHH
Confidence 4444454444444333 456666777777765 345555444 444445666677777899999999 99999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccc--hhhHHHHHHHHHH
Q 004750 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRV--RGICIAICALVFW 663 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ 663 (732)
+++.+..+..++.+.+.+... .....++...+ .+.+.+ +.+....++.|.+|++. |+.++++.....+
T Consensus 83 ~~~~g~~~~~~g~~~~~~~~~-------~~~ll~~~~~l--~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~n 153 (489)
T PRK10207 83 TIVLGAIVLAIGYFMTGMSLL-------KPDLIFIALGT--IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSIN 153 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------chhHHHHHHHH--HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHH
Confidence 999999999888877765311 01111122222 223222 34555678899999874 4778999999999
Q ss_pred HHHHHHHhHHHHHHHhhchhHHHHHHHHHHH
Q 004750 664 IGDIIVTYSLPVLLNSVGLAGVFGMYAVVCV 694 (732)
Q Consensus 664 ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~ 694 (732)
+|.+++|.+.|++.+..||++.|++.++..+
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 9999999999999999999999988654333
No 194
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.90 E-value=1.8e-08 Score=112.92 Aligned_cols=152 Identities=13% Similarity=0.037 Sum_probs=111.0
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+++++....+.+.+ .+.++.+++.+++|+++||+|||+.+..+..+..++.++..+.... ..+..++.-++.+
T Consensus 70 ~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILS-SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG------GIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHH-HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc------CchHHHHHHHHHH
Confidence 57788866665554 5789999999999999999999999988877766665554332110 1112222222222
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHHhccC
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS-VGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~~~~~~~~~e 706 (732)
++. ....+....+.+|.+|++.|+++.++......+|.++++.+.+.+.+. .||+.+|.+.++.+++..++.+.+.+|
T Consensus 143 ~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 143 LAQ-GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred Hhc-ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 222 233455667889999999999999999999999999999999999988 499999999888877776666555554
Q ss_pred C
Q 004750 707 T 707 (732)
Q Consensus 707 t 707 (732)
.
T Consensus 222 ~ 222 (465)
T TIGR00894 222 D 222 (465)
T ss_pred C
Confidence 3
No 195
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.89 E-value=1.6e-07 Score=107.25 Aligned_cols=155 Identities=12% Similarity=0.124 Sum_probs=116.7
Q ss_pred HHHHHHHHhCCCCchhHHHHHHH-HHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHH
Q 004750 28 AVLYIKREFHLETEPTIEGLIVA-MSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLLA 102 (732)
Q Consensus 28 ~~~~I~~~lgl~~s~s~~gll~S-l~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~---a~a-~s~~lLiI~ 102 (732)
..|++.+++|. +..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.+++ +.. ++.+.+.+.
T Consensus 245 ~~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 245 TTTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 44566677899 8899999874 6678999999999999999999998877766555544332 222 345555556
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 004750 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 103 R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
-++..++.|...+...++..+..+++.++...++.+....+|..+++ ...+.+.+..||+..|.+.++++++.+++.
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~--~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~- 399 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVG--PVAGWFVEAHGWPTFYLFSVAAAVPGLLLL- 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHHHH-
Confidence 66666666666677788889999999999999999999999988774 345556667799999999888888866544
Q ss_pred hhccC
Q 004750 183 FYLPE 187 (732)
Q Consensus 183 ~~~~e 187 (732)
.++++
T Consensus 400 ~~~~~ 404 (491)
T PRK11010 400 LVCRQ 404 (491)
T ss_pred HHHHh
Confidence 33444
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.89 E-value=1.7e-07 Score=107.25 Aligned_cols=165 Identities=21% Similarity=0.205 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCCh--HHHHHHHHHHHHHHHHHHh--
Q 004750 17 LQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW-- 92 (732)
Q Consensus 17 ~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrR--kvLLigllL~aIgslL~a~-- 92 (732)
.+++ ++.+.....+..+++|+ +..+...+.-+..+..++|++++|++.||+|.| ++++++++++.+..+...+
T Consensus 294 ~dg~-~ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 294 SDGV-NTIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHH-HHHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 3444 35556667778889999 889999999999999999999999999999999 8988888888665555554
Q ss_pred ------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hhHH
Q 004750 93 ------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRL 165 (732)
Q Consensus 93 ------a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~-~Wr~ 165 (732)
..+.+.+.+.-++.|++.|..++...++.++..|+.+.+..+|++.+..-....+||+.. ..+.+.. +-|+
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~--g~i~~~tg~~r~ 448 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLF--GLITDATGSQRY 448 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCCchh
Confidence 567788999999999999999999999999999999999999999999999999995544 3333333 4788
Q ss_pred HHHHHHHHHHHHHHHHHhhccC
Q 004750 166 MLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~~~e 187 (732)
.+..+.++.++.+++ +++++.
T Consensus 449 g~~~l~~lf~~gl~l-l~~v~~ 469 (477)
T PF11700_consen 449 GFLFLLVLFLIGLIL-LFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHHH-Hhhccc
Confidence 888887777776654 355554
No 197
>TIGR00898 2A0119 cation transport protein.
Probab=98.87 E-value=5.3e-08 Score=110.13 Aligned_cols=135 Identities=24% Similarity=0.267 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004750 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNV--YVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 49 ~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~--~lLiI~R~l~G~g~G~~~~~~~alIaE~fP 126 (732)
..+..+..+++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 344556677888999999999999999999999998888887776543 455556677778888888889999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 127 PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 127 ~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+.|+.++++.+....+|.++++.... ....++...+.+.++.+++..++ .+++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY----LGEKWLFLPLVLFGGLALLAGIL-TLFLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH----HHHHHHhhHHHHHHHHHHHHHHH-HHcCcCC
Confidence 999999999999999999999954443 22346677787877777775554 5678887
No 198
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.87 E-value=2.8e-07 Score=102.83 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=96.6
Q ss_pred HHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH--h--hhhHHHHH
Q 004750 26 AGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML--W--SPNVYVLL 100 (732)
Q Consensus 26 ~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a--~--a~s~~lLi 100 (732)
...+|. +.+.+|. +..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . ..+....+
T Consensus 263 ~~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 334554 5566888 778888988888888899999999999999999988777665444332221 1 12222222
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH-HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 101 I~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~-G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
..-++.+++.+...+....++.|++|++.|+.+.++.+....+ ..... +.....+.....|...++..++..++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~--p~~~~~l~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSA--EYVALSLKSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHH--HHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 2223333444444556678899999999999999997765443 22223 22222222222365666666666665554
Q ss_pred HHHhhccC
Q 004750 180 LTIFYLPE 187 (732)
Q Consensus 180 l~~~~~~e 187 (732)
.. +++++
T Consensus 419 ~~-~~l~~ 425 (432)
T PRK10406 419 VS-LMLHR 425 (432)
T ss_pred HH-HHhhh
Confidence 43 34443
No 199
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.86 E-value=2.2e-07 Score=101.75 Aligned_cols=148 Identities=11% Similarity=-0.062 Sum_probs=110.7
Q ss_pred HHHHHHHHhCCCCchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHH
Q 004750 28 AVLYIKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW------SPNVYVLL 100 (732)
Q Consensus 28 ~~~~I~~~lgl~~s~s~~gll~Sl~~I-G~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~------a~s~~lLi 100 (732)
..+.+.+|.|. +..+.|++.....+ ...++.++.|++.||+|+|+++.++.++.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 34555567899 89999999887764 66677899999999999999988877665333332221 12334444
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCc-chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 101 LARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 101 I~R~l~G~g~G~~~~~~~alIaE~fP~-k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
...++.+++.|...+...+.+.+..++ +.++...++.+....+|..++ +...+.+.+..||+..|.+.++++++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g--~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA--SSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 555666777788888888888788776 889999999999999999999 55566667777999999888877666443
No 200
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=2.6e-07 Score=92.03 Aligned_cols=164 Identities=26% Similarity=0.417 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch--hHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~--s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgsl 88 (732)
.....+....+........+.+..+++. +. ...++..+.+.++..++.+++|.++||+|||+.+..+.....++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 84 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSL--SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTL 84 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHH
Confidence 3444555557777777788888888876 44 4789999999999999999999999999999888888876666666
Q ss_pred HHHhhhh--HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc-chhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccchhH
Q 004750 89 VMLWSPN--VYVLLLARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 89 L~a~a~s--~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~-k~RG~~~~~~~~-~~~~G~~ig~l~~l~~~l~~~~~Wr 164 (732)
++.+..+ .+.+++.|++.|++.+...+...+++.|++|. ++|+...++... ...+|..+++............+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T COG0477 85 LLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWR 164 (338)
T ss_pred HHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 7776665 89999999999999999999999999999998 678999888888 5778888885333222211346899
Q ss_pred HHHHHHHHHHHH
Q 004750 165 LMLGVLFIPSLI 176 (732)
Q Consensus 165 ~~~~i~~~l~~i 176 (732)
+.|.+..+....
T Consensus 165 ~~~~~~~~~~~~ 176 (338)
T COG0477 165 AAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHH
Confidence 966655554443
No 201
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.83 E-value=4.9e-08 Score=113.77 Aligned_cols=153 Identities=20% Similarity=0.234 Sum_probs=108.1
Q ss_pred HhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhc
Q 004750 531 YYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKM 610 (732)
Q Consensus 531 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~ 610 (732)
.-++.+..++|-+ ....+++....+...++.++.|+++|.+|||..++.+..+..++.++......
T Consensus 65 ~~l~~I~~diG~~-----------~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~--- 130 (599)
T PF06609_consen 65 SILPYINADIGGS-----------DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN--- 130 (599)
T ss_pred HHHHHHHHhcCCC-----------ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc---
Confidence 3445666665533 23444556688889999999999999999999999999998888887765321
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHH
Q 004750 611 GSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYA 690 (732)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~ 690 (732)
....+....+++.+.+ ...+....++|+.|.+.|..+.++.....-+...+++.+...+....+|||.|++++
T Consensus 131 -----~~~~iag~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~ 203 (599)
T PF06609_consen 131 -----MNTFIAGMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFI 203 (599)
T ss_pred -----HHHHHHHHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHH
Confidence 1233444555555443 333445567999999999988887776555555567777766666679999999998
Q ss_pred HHHHHHHHHHHHhc
Q 004750 691 VVCVISWIFVFIKV 704 (732)
Q Consensus 691 ~~~~i~~~~~~~~~ 704 (732)
+...++.+..+++.
T Consensus 204 i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 204 IWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHHHHh
Confidence 88877766654443
No 202
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.83 E-value=1.9e-06 Score=94.48 Aligned_cols=152 Identities=20% Similarity=0.211 Sum_probs=105.5
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004750 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~ 110 (732)
.+-+++|+ +..+++.+....+...++..++.|.++||+|||+.-++.+++.+++++ +-..++++.++++|++.|++.
T Consensus 59 ~LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 59 ALYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHH
Confidence 34468999 899999999999999999999999999999999999999999999875 455689999999999999999
Q ss_pred hhHhHHHHHHHH-hc----CCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHH
Q 004750 111 GLAVTLVPIYIS-ET----APPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAP--SWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 111 G~~~~~~~alIa-E~----fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~~--~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
...+.+..+++. |. +|++..+...+... ...++-.+++.+..- ...+.. |-..+|....++.++..+++.
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~--~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVAN--VLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHH--HHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 999888877653 43 34444444333333 122222222222221 122222 336777776666666555544
Q ss_pred hhccC
Q 004750 183 FYLPE 187 (732)
Q Consensus 183 ~~~~e 187 (732)
...+|
T Consensus 214 ~~W~E 218 (354)
T PF05631_consen 214 KTWPE 218 (354)
T ss_pred hcccc
Confidence 44444
No 203
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.81 E-value=3.2e-07 Score=102.48 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=110.4
Q ss_pred HHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhh
Q 004750 530 LYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIK 609 (732)
Q Consensus 530 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~ 609 (732)
....|.+.++ +|++..+. .++.....++.+++.++.+++.||+|||++++.+..++.++.+.+......
T Consensus 23 ~~l~~~~~~~---------~~~s~~~~-g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~- 91 (410)
T TIGR00885 23 NPMVPQFQQA---------FTLTAFQA-ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI- 91 (410)
T ss_pred HHHHHHHHHH---------hCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 3555666554 45555554 455567889999999999999999999999999998888887665432110
Q ss_pred cccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh----------
Q 004750 610 MGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS---------- 679 (732)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~---------- 679 (732)
.+.+..++..++.+++.+.. .+..+.+..++.|++.|+...++.+.+..+|..++|.+.+.+...
T Consensus 92 ----~~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 92 ----MNYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred ----ccHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 01122222233333333322 233456677888999999999999999999999999999887532
Q ss_pred ----------------hchhHHHHHHHHHHHHHHHHHH-HhccC
Q 004750 680 ----------------VGLAGVFGMYAVVCVISWIFVF-IKVPE 706 (732)
Q Consensus 680 ----------------~g~~~~f~~~~~~~~i~~~~~~-~~~~e 706 (732)
.+|+.+|++.++++++..++.. ...|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4688899888887776654443 33454
No 204
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.79 E-value=5e-06 Score=93.11 Aligned_cols=159 Identities=15% Similarity=0.194 Sum_probs=120.4
Q ss_pred HHHHHHHH-hCCCCchhHH-HHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004750 28 AVLYIKRE-FHLETEPTIE-GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (732)
Q Consensus 28 ~~~~I~~~-lgl~~s~s~~-gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l 105 (732)
..|++.+. .|+ +..++ .-+.-+..-.+....++...+.|..+.|++++++.+...+..++..+.++...+-+.-+.
T Consensus 26 l~~yL~~~~kn~--T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~ 103 (412)
T PF01770_consen 26 LTPYLTGPDKNF--TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFF 103 (412)
T ss_pred chHHHcCCccCC--CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHH
Confidence 45666665 677 54443 234555566778888999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 004750 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (732)
Q Consensus 106 ~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~ 185 (732)
.|++.+.. ++..+++--..|+++--++.+......-+|.+++.+..-........+.+....+......+ .++..+++
T Consensus 104 yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~-a~~~~~fL 181 (412)
T PF01770_consen 104 YGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL-ALLIALFL 181 (412)
T ss_pred HHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHHc
Confidence 99998775 77888999999999989999998888888888886555444333455666666555443333 33445678
Q ss_pred cCCch
Q 004750 186 PESPR 190 (732)
Q Consensus 186 ~esp~ 190 (732)
|..++
T Consensus 182 P~~~~ 186 (412)
T PF01770_consen 182 PMPKR 186 (412)
T ss_pred CCCCc
Confidence 86543
No 205
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.77 E-value=3.6e-07 Score=96.16 Aligned_cols=144 Identities=17% Similarity=0.126 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
+|+.++...+.....|. ...++..-|.+++.+|+ +.++...+.+...+|..+ .++.|.+.|++|++.++++|.+..
T Consensus 1 rW~~l~a~~~v~~~~Gt-~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGT-TYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLG 76 (250)
T ss_pred ChhhHHHHHHHHHhcCc-ccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHH
Confidence 46666666666666653 45566777899999999 999999999999999876 588999999999999999999999
Q ss_pred HHHHHHHHhh-------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 84 FIGGLVMLWS-------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 84 aIgslL~a~a-------~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
.+|..+...+ ++++.+.+..++.|.+.+...........+.|| ++||.+.++.-.+.+++..+-....
T Consensus 77 ~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~ 151 (250)
T PF06813_consen 77 FVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIY 151 (250)
T ss_pred HHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHH
Confidence 9888776542 467888888888888877777777777788998 5899999999999999998874443
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.76 E-value=6.7e-07 Score=102.07 Aligned_cols=159 Identities=21% Similarity=0.175 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh---h-H----
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP---N-V---- 96 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~---s-~---- 96 (732)
+......+.++.|+ +..+.-+.+....+...++++++.++.||+|||+.+++++.++.+..+++...- + .
T Consensus 289 i~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 289 IFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred eHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33444578888899 888888999999999999999999999999999999999999988887776531 1 1
Q ss_pred -HHHHHHHHHHHHHHhhH-hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004750 97 -YVLLLARLLDGFGIGLA-VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (732)
Q Consensus 97 -~lLiI~R~l~G~g~G~~-~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~ 174 (732)
+..+++.++..++.+.. -|+.+-+.+|.+|++.|..+.++..+...+..++- ......+.+..|= +.|.+..+++
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv--~~~fp~l~~~~g~-~~filF~i~~ 443 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV--GFAFPPLQNVIGP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcc-hhhHHHHHHH
Confidence 12334444444444333 37778889999999999999999888888877776 2223333333343 7788888888
Q ss_pred HHHHHHHHhhccCC
Q 004750 175 LIYFVLTIFYLPES 188 (732)
Q Consensus 175 ~i~~~l~~~~~~es 188 (732)
++.++..++++|||
T Consensus 444 ~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 444 AIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHhCccc
Confidence 88888999999999
No 207
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.76 E-value=2.2e-07 Score=100.01 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHH-HHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh--------
Q 004750 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSL-IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-------- 93 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~-IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a-------- 93 (732)
......+|.+.+++|. +..+.+++.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~--~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T TIGR00901 226 SAATVLTTLFLLDMGF--SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3344455665566888 8889888887655 6778999999999999999999998888887776655543
Q ss_pred ---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHH
Q 004750 94 ---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGC 142 (732)
Q Consensus 94 ---~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~ 142 (732)
++.+.++++.++.+++.+...+...+++.|.+|+++||+..++.+...+
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4567788889999999999999999999999999999999999877654
No 208
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.75 E-value=2.4e-07 Score=102.78 Aligned_cols=150 Identities=17% Similarity=0.235 Sum_probs=120.8
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++++|+.+..++.. +..+.+.+.+++.|++.||+|-|++...+..++++-++.+.+.... +.. ....++-..
T Consensus 43 ~~~LS~~q~~ll~a-iPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~------~~~-~~ll~~gll 114 (417)
T COG2223 43 DFGLSEGQKGLLVA-IPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY------PST-WQLLVIGLL 114 (417)
T ss_pred ccCCCHHHHHHHHH-HHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC------Cch-HHHHHHHHH
Confidence 67888877666654 5778888899999999999999999999988888888877764221 111 334444455
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHhc
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG---LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g---~~~~f~~~~~~~~i~~~~~~~~~ 704 (732)
++++.+..++...++++.+|++.+|.+.|+.. .+++|..+...+.|.+....| |+.+..++....++..+..++.+
T Consensus 115 ~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 115 LGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555666666778899999999999999999 999999999999999999999 99999999998888888888776
Q ss_pred cC
Q 004750 705 PE 706 (732)
Q Consensus 705 ~e 706 (732)
.+
T Consensus 194 ~d 195 (417)
T COG2223 194 ND 195 (417)
T ss_pred CC
Confidence 43
No 209
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.74 E-value=3.9e-07 Score=102.15 Aligned_cols=172 Identities=13% Similarity=0.188 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004750 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS 93 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a 93 (732)
..+-+.+|.+ +......+-++-+. +....|.+.++..+.-++...+..++.+|+|.|+.++++.+++++=.++++++
T Consensus 233 ~~~Y~vfdqq-f~~y~~~~f~~~~~--g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 233 AAIYDVFDQQ-FPIYFASFFQSAGQ--GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHTSSSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHH-HHHHHHHHhccccc--ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh
Confidence 3455666665 32222222222223 45679999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004750 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP-QFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 94 ~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~-~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
++.+.+.+.+.|.|+..+........++++.+|++-.++...+. ++..++|.++. ....+.+.+..|.+.+|++++.
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~--s~~~G~lyd~~G~~~tylimg~ 387 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL--SPLAGYLYDRIGFQHTYLIMGL 387 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH--hhhHHhhHhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999988877666663 67778888887 5556777888999999999999
Q ss_pred HHHHHHHHHHhhccCCch
Q 004750 173 PSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp~ 190 (732)
+.++..++.++.++..++
T Consensus 388 iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 388 IVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHheeeecCCCc
Confidence 988888888888876544
No 210
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.74 E-value=9.6e-09 Score=114.81 Aligned_cols=159 Identities=18% Similarity=0.128 Sum_probs=125.6
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Q 004750 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLY 626 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (732)
.-++++.. ...++..+..+...+++++.|++.||++|++++.+++.+-.++.++..+. .+.|..+++-.+.
T Consensus 61 ~~fni~~s-~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--------~~Fwq~~l~R~~v 131 (493)
T KOG1330|consen 61 TYFNISDS-ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--------NHFWQVLLCRGFV 131 (493)
T ss_pred HhcCCCch-hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--------HHHHHHHHHHHHh
Confidence 34566664 45556777889999999999999999999999999998888887776663 1333333333333
Q ss_pred HHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 004750 627 FCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG-LAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 627 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~~~~~~~~~ 705 (732)
+.+-. ...++...++++.+|...|++.+++.+++..+|..+|-.+...+.++.+ |++.|++.+++.+++.++++++++
T Consensus 132 GiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 132 GIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred ccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 33322 4567778889999999999999999999999999999998888888877 999999999999999999999888
Q ss_pred CCCCCChhhh
Q 004750 706 ETKGMPLEVI 715 (732)
Q Consensus 706 et~~~~~~~~ 715 (732)
|...+..|+.
T Consensus 211 eP~rga~~~~ 220 (493)
T KOG1330|consen 211 EPERGARDEV 220 (493)
T ss_pred Cccccccccc
Confidence 8765444443
No 211
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=3.9e-07 Score=101.30 Aligned_cols=181 Identities=20% Similarity=0.210 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL 82 (732)
++-++.++++-..+.+|.+ +.++....+-..++|+ +..+..++.....+..+++++++|++.||+|.|+++.++.++
T Consensus 251 ~~~i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVN-TILAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred ccchHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH
Confidence 3456666666666777764 5556666677779999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~ 162 (732)
..+.++...+...-..+.++-.+.|++.|+.+...-++..+.+|+++-+..+|+++.+.-.+..+|++.......... +
T Consensus 328 ~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg-~ 406 (438)
T COG2270 328 LSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG-S 406 (438)
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc-c
Confidence 998888877776667777888999999999999999999999999999999999999999999999655544433332 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
-|.-+....++..+.++ .++.+|+.
T Consensus 407 ~r~g~~~i~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 407 SRAGVLSIIVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred hhhHHHHHHHHHHhhHh-hEEeecCC
Confidence 67666666555555443 34555543
No 212
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.71 E-value=6e-07 Score=102.69 Aligned_cols=189 Identities=15% Similarity=0.102 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhh----cccc
Q 004750 509 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMD----ISGR 584 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d----~~gr 584 (732)
++++....+....|++ +.....+++.+++..|.+ . ....++..+..+..++..++.|+++| |+||
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~---------~-~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR 72 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGIP---------H-AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGR 72 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCC---------H-HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence 3444445555555654 445566777788776544 4 45555566788999999999999999 5999
Q ss_pred hhHHHhh-HHHHHHHHHHHHHHHHhh----c--ccchhhH---HHHHHHHHHHHHHhhcccchhhhhhccCCCccch--h
Q 004750 585 RTLLLST-IPILITSLVVLVLSSVIK----M--GSVVHAS---ISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVR--G 652 (732)
Q Consensus 585 r~~~~~~-~~~~~i~~~~~~~~~~~~----~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~ 652 (732)
|+.++.. .+...++++++....... . ......+ ..++.+.+..++..+...| ..++++|++|++.| +
T Consensus 73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~ 151 (477)
T TIGR01301 73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTR 151 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHH
Confidence 9987764 444444444444321100 0 0000111 1112222222233322233 35788999999866 5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHH--HHhh-------------chhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004750 653 ICIAICALVFWIGDIIVTYSLPVL--LNSV-------------GLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 653 ~~~gi~~~~~~ig~~i~~~~~~~l--~~~~-------------g~~~~f~~~~~~~~i~~~~~~~~~~et~~ 709 (732)
.+.++.+....+|+++++.+.+.. .+.. +.+.+|.+-+++.+++.++..+.++|..-
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 799999999999999999988864 2221 56778998888888988888888898753
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.71 E-value=1.2e-06 Score=98.60 Aligned_cols=136 Identities=12% Similarity=0.031 Sum_probs=92.6
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.+....+.|.+-++ +|++..+. .+....+.++..++.++.|+++||+|||++++.+..+..++.+++...
T Consensus 42 ~~~~~~~~p~i~~~---------~~~s~~~~-gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~ 111 (438)
T PRK10133 42 NNLNDILLPQFQQA---------FTLTNFQA-GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA 111 (438)
T ss_pred HHHHHHHHHHHHHH---------hCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677776544 45666444 445567889999999999999999999999999998888888765321
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL 677 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~ 677 (732)
.. ..+.+..++..++.+++.+.. .+..+.+..|..|.+.|....++.+.+..+|..+++.+.+.+.
T Consensus 112 ~~-----a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 112 AE-----IMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred Hh-----cCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 011223333334444444432 2334456678777776666899999999999999998877654
No 214
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.70 E-value=1.3e-07 Score=107.95 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....+...++.++.++|.++.|.++||+|||++++.+..+.+++-++.++. .....+...=++.+.+..+.
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---------~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---------PNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh---------CcHHHHHHHHHHHHhhccch
Confidence 344455667889999999999999999999999999999888888666663 22233333334444444556
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
..+.++++.|+++++.|+.+..+ ..+.+.++.+++...+++.. +|++.+++....+++..++ +++.||++
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 67778899999999999999999 89999999999999999888 8999999988888877665 55555764
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=98.67 E-value=1.6e-06 Score=97.03 Aligned_cols=126 Identities=19% Similarity=0.313 Sum_probs=97.7
Q ss_pred HHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHH
Q 004750 26 AGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLA 102 (732)
Q Consensus 26 ~~~~~~I~~-~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~--s~~lLiI~ 102 (732)
....|++.+ .+|. +....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++.
T Consensus 248 ~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 248 SASSLFYVRYVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred hhhheeeEeeecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 334454433 4565 544445555555677888999999999999999999999998888877776643 56777777
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcc-------hhhhhhhHHHHHHHHHHHHHHHHHH
Q 004750 103 RLLDGFGIGLAVTLVPIYISETAPPE-------IRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 103 R~l~G~g~G~~~~~~~alIaE~fP~k-------~RG~~~~~~~~~~~~G~~ig~l~~l 153 (732)
.++.|+|.+...+...+++.|..|.+ ++|...++.++...+|..++.....
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998754 4599999999999999999855543
No 216
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.67 E-value=2.7e-06 Score=93.80 Aligned_cols=144 Identities=17% Similarity=0.143 Sum_probs=103.1
Q ss_pred HHHHHHHhCCCCchhHHHHHHHHHH-HHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH
Q 004750 29 VLYIKREFHLETEPTIEGLIVAMSL-IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLLAR 103 (732)
Q Consensus 29 ~~~I~~~lgl~~s~s~~gll~Sl~~-IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~---a~a-~s~~lLiI~R 103 (732)
.+.+.+++|+ +..+.|++.+... ++..++.+++|++.||+|+|+.+.++.++.+++.+.. ++. ++.+.+++.-
T Consensus 233 ~~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 233 TTFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 3567777899 8899999886654 5688999999999999999998887777666554433 333 3445544443
Q ss_pred ----HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 104 ----LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 104 ----~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
+..|++.+..++....++.+.+|.+.++ +.+...++|..++. ...+.+.+..||+.+|.+.++++++.++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~--~~~G~l~~~~G~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVG--PTSGYLVEAYGWPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 4566777777888888888888876654 34444456665552 3456667788999999999988877654
Q ss_pred H
Q 004750 180 L 180 (732)
Q Consensus 180 l 180 (732)
+
T Consensus 385 ~ 385 (402)
T PRK11902 385 L 385 (402)
T ss_pred H
Confidence 4
No 217
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.65 E-value=2.5e-06 Score=91.94 Aligned_cols=130 Identities=11% Similarity=0.008 Sum_probs=103.3
Q ss_pred hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhH
Q 004750 36 FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVT 115 (732)
Q Consensus 36 lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~ 115 (732)
+|+ ++.+.++..+.+..+..++.++.+++.||+|+|+++.++.++.+++.++....++... ..+-++.|++.+..+|
T Consensus 173 ~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P 249 (310)
T TIGR01272 173 LGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFP 249 (310)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHH
Confidence 578 8899999999999999999999999999999999998888888877766655544332 3455689999999999
Q ss_pred HHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004750 116 LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 116 ~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
...+...+.+|++ .+.+.++. ....+|.++. |...+.+.+..|.+..|++..+
T Consensus 250 ~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~--P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 250 TIFSLALNALGRH-TSQGSGIL-CLAIVGGAIV--PLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHH--HHHHHHHHHhccchHHHHHHHH
Confidence 9999999988853 56677775 5666888888 5556666677788888875443
No 218
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.65 E-value=1.3e-06 Score=94.09 Aligned_cols=131 Identities=20% Similarity=0.198 Sum_probs=100.3
Q ss_pred HHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004750 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (732)
Q Consensus 24 ~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIgslL~a~a~s~~lLiI~ 102 (732)
.+...+|.+.+++|. +..+.+++.+...++.++++++.|++.||+ +||+.+.++.++.+++.+++.+.++...+. .
T Consensus 215 ~~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 344456777778888 889999999999999999999999999999 566677778788888777777665443332 4
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004750 103 RLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 103 R~l~G~g~G~~~~~~~alIaE~f-P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~ 159 (732)
-++.|++.|..++...+.+.+.. ++++++...++.+....+|.+++ +...+.+.+
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g--p~~~G~l~~ 347 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALG--PLFVGVLHD 347 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 57889999999988877776555 45677888998888888888888 444444443
No 219
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.62 E-value=4.9e-07 Score=106.81 Aligned_cols=160 Identities=14% Similarity=0.042 Sum_probs=109.6
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhh----c------------
Q 004750 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIK----M------------ 610 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~----~------------ 610 (732)
+++++++++.+.+ ...+.++.+++.++.+++.||.|||+++..+.+++.++.+++++..+.. .
T Consensus 61 k~F~lss~~~G~i-~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~ 139 (633)
T TIGR00805 61 RRFKLSTSSSGLI-NGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSS 139 (633)
T ss_pred hhhCCCCCcceee-eehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccc
Confidence 4677887665544 5568899999999999999999999999999999999988876642110 0
Q ss_pred -----c--c---------------c-h--hhHHHHHHHHHHHHHHhh-cccchhhhhhccCCCccchhhHHHHHHHHHHH
Q 004750 611 -----G--S---------------V-V--HASISTVSVVLYFCCFVM-GFGPIPNILCSEIFPTRVRGICIAICALVFWI 664 (732)
Q Consensus 611 -----~--~---------------~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~i 664 (732)
. . . . .....++.+.-+..+++. ...++...++.|.+|++.|+...|+.+....+
T Consensus 140 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~i 219 (633)
T TIGR00805 140 ANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVF 219 (633)
T ss_pred cccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHh
Confidence 0 0 0 0 001111111112222222 23455668889999999999999999999999
Q ss_pred HHHHHHhHHHHHHHhh---------------------c-hhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 665 GDIIVTYSLPVLLNSV---------------------G-LAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 665 g~~i~~~~~~~l~~~~---------------------g-~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
|..+++.+.+++.+.. | |+..|++.+++.++..+. ++++|++.
T Consensus 220 G~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~l 284 (633)
T TIGR00805 220 GPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKAL 284 (633)
T ss_pred hhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCcccc
Confidence 9999999999988643 1 555677777766665544 44566543
No 220
>PTZ00207 hypothetical protein; Provisional
Probab=98.61 E-value=2.3e-06 Score=100.16 Aligned_cols=165 Identities=11% Similarity=0.113 Sum_probs=105.4
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.+.+..+.|.+-++.| ++..+.+.+.. +.... ..+.+++|++.||+|+|++++++..+..++.+++.+.
T Consensus 43 ~y~fsv~s~~L~~~lg---------ls~~~l~~i~s-vg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLISGAMQARYN---------LTQRDLSTITT-VGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHHHHhC---------cCHHHHHHHHH-HHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777787766654 44445444433 22222 2355678999999999999999999999988877764
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
..... ... ...+++.....+++.+ +.+.....+.+.|| +.||.+.|+......+|+++.+.+...++. .+++.
T Consensus 112 ~~~~i---~~s-~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~ 185 (591)
T PTZ00207 112 FQEVI---EGS-VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSA 185 (591)
T ss_pred hcccc---cCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHH
Confidence 22110 011 1222222222222222 22333456688887 679999999999999999876665555554 35777
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC
Q 004750 685 VFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~~~~et 707 (732)
.|++.+++.++..++.+.+++..
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr~p 208 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMRLP 208 (591)
T ss_pred HHHHHHHHHHHHHHHHHhheeCC
Confidence 88888888887777766666433
No 221
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.56 E-value=4.3e-06 Score=94.85 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh-----hhhHH
Q 004750 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-----SPNVY 97 (732)
Q Consensus 23 ~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~-----a~s~~ 97 (732)
.......+++.+.... +....+++.++..++.+++.+++++++||+|+|+.+.++.++.+++.+...+ ..+.+
T Consensus 248 ~~~~~~~~y~~~y~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 248 NIINGFAIYYFTYVIG--DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHhhheeeEEEEECC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3334444555555443 4567778888777889999999999999999999999888776666555432 34566
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 98 VLLLARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 98 lLiI~R~l~G~g~G~~~~~~~alIaE~fP-------~k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
.+++.-++.|++.+...+...+++.|..+ .+..|...++..+..-+|..+++.....
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888999999999999999999966 3445668888888888888888554433
No 222
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.56 E-value=2.4e-06 Score=98.06 Aligned_cols=140 Identities=23% Similarity=0.267 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccch
Q 004750 558 LLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPI 637 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (732)
.++.....++.+++.+++|+++|++|||+.++.+.+...++.++..+.. +....++.-++.+++.+... .+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~-~~ 162 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------SWYQLIVGRILTGLGVGGAS-VL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhccchhhhh-hc
Confidence 4556678899999999999999999999999999999999998888753 12233444445554444333 34
Q ss_pred hhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh--chhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004750 638 PNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV--GLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~--g~~~~f~~~~~~~~i~~~~~~~~~~et~ 708 (732)
..++.+|+.|++.||...++.++...+|..++ ++.+...... +|+..+++..+.+++..+. ++++||+.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 45889999999999999999999998776666 7777777654 8998888888777777776 77888763
No 223
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.56 E-value=9e-07 Score=102.07 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC--ChHHHHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--RRPMLIVSSVLYFIG 86 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG--rRkvLLigllL~aIg 86 (732)
+..+++..+...........+|...++.+. +..+...+.++..+...++.++.|+++|+.. ++.+..+++++.+++
T Consensus 301 l~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 301 LLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 344555555556666666778999999999 8899999999999999999999999999998 456677788888888
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-hHH
Q 004750 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS-WRL 165 (732)
Q Consensus 87 slL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~-Wr~ 165 (732)
.+.++++++++.++....+.|+..|.........+.|..+.++-..+.|+..++.+++..+| +++.+.+.+..+ |..
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g--pPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVG--PPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcC--cccceeeeeccCCeee
Confidence 88899999999999999999999999999888999999999999999999999999999999 666666666555 999
Q ss_pred HHHHHHHHHHHHHHH
Q 004750 166 MLGVLFIPSLIYFVL 180 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l 180 (732)
.|...++..++..++
T Consensus 457 ~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVL 471 (509)
T ss_pred ehhhcChHHHHHHHH
Confidence 999988887776644
No 224
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.55 E-value=3.6e-07 Score=100.26 Aligned_cols=145 Identities=18% Similarity=0.094 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
..+.++...+.+..++.++..|.++||+|||.+++.+++...++.+..+.+.. ...++..=+.+.++. +.
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---------F~afv~aR~l~Gi~k-gn 137 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---------FAAFVLARFLGGIFK-GN 137 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHhhhhcc-Cc
Confidence 56777777889999999999999999999999999999888887777766321 111111112223333 34
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH---hhchhHHHHHHHHHH---HHHHHHHHHhccCCC
Q 004750 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN---SVGLAGVFGMYAVVC---VISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~---~~g~~~~f~~~~~~~---~i~~~~~~~~~~et~ 708 (732)
-.+..++++|+++++.|+.+++..+....+|-++||.++|++.. ..|..+.++....++ .....++..++|||-
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 45566888999999999999999999999999999999999987 344333333222222 222345566789994
Q ss_pred C
Q 004750 709 G 709 (732)
Q Consensus 709 ~ 709 (732)
.
T Consensus 218 ~ 218 (451)
T KOG2615|consen 218 P 218 (451)
T ss_pred c
Confidence 3
No 225
>PRK09669 putative symporter YagG; Provisional
Probab=98.54 E-value=4.8e-06 Score=93.29 Aligned_cols=127 Identities=19% Similarity=0.230 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHH
Q 004750 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW--SPNVYVLLLAR 103 (732)
Q Consensus 26 ~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~--a~s~~lLiI~R 103 (732)
+...+++.++.-- +....+.+.....+..+++.+++++++||+|+|+.+.++.++.+++.+...+ ..+.+.+++..
T Consensus 249 ~~~~~y~~~~~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T PRK09669 249 GGATLYYVNYVLL--RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALN 326 (444)
T ss_pred hhhhheeeeeecC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 3334444443322 3444556666677888889999999999999999999887766654443322 34677778888
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCc-------chhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 104 LLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 104 ~l~G~g~G~~~~~~~alIaE~fP~-------k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
++.|++.+...+...++++|..+. +..|...++......+|..+++.....
T Consensus 327 ~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 327 ILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999862 234667788888888888888554433
No 226
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.52 E-value=1e-05 Score=90.70 Aligned_cols=172 Identities=20% Similarity=0.260 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLYIKREFH-LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~~lg-l~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a 91 (732)
+..++.+...+.+....+...++.| . +....|.+.++..++-++.-.+.+++..|+|.|++++++.+..++=..+++
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~gg~--~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELGGY--SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666666676677777 6 566778887888888888999999999999999999999999999888888
Q ss_pred hh-hhHHHHHH----HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccc----
Q 004750 92 WS-PNVYVLLL----ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAP---- 161 (732)
Q Consensus 92 ~a-~s~~lLiI----~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~-~~~~G~~ig~l~~l~~~l~~~~---- 161 (732)
+. ++.+...+ ...+.|+..|..+.+...++.+.+|++.|+.+.++++. ..++|.++|.... +.+.+..
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig--G~l~~~~g~~~ 369 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG--GWLYDAFGARG 369 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH--HHHHHHhcchh
Confidence 76 44444333 34579999999999999999999999999999999875 4689999995554 4444433
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 162 --SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 162 --~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.|...+.+.+.+.++..++.+++.+|+
T Consensus 370 ~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 370 MFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 455667777776666666656666654
No 227
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.51 E-value=6.1e-06 Score=94.00 Aligned_cols=159 Identities=13% Similarity=0.151 Sum_probs=113.1
Q ss_pred HHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHH
Q 004750 528 GVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~ 607 (732)
...+-.|.+.++ +|++..+....+..+...+-++..+++|++.||+|-|+++..+.+...+..+++.+...
T Consensus 44 n~s~a~p~L~~e---------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTV---------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHH---------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555655554 45666662455556788999999999999999999999998888888777777766311
Q ss_pred hhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHH
Q 004750 608 IKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFG 687 (732)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~ 687 (732)
.....+.-++++.+-+..+ ..+.++...+|++.|+++.|+++....+|.++++++.++ +...||+..+-
T Consensus 115 --------l~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~ 183 (511)
T TIGR00806 115 --------VWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYST 183 (511)
T ss_pred --------HHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHH
Confidence 1233344455555555444 556777899999999999999999999999999999999 55678886554
Q ss_pred H--HHHHHHHHHHHHHHhccC
Q 004750 688 M--YAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 688 ~--~~~~~~i~~~~~~~~~~e 706 (732)
+ +...+.+..++..+++|.
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 3 233334444445556773
No 228
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.51 E-value=9.2e-05 Score=84.28 Aligned_cols=105 Identities=22% Similarity=0.231 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc
Q 004750 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE 128 (732)
Q Consensus 49 ~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k 128 (732)
.++.+....+++++.+.+.|+.|.|..++++.....+..+.+.+ +|-+.+++.-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 67777788999999999999999999999999988887666665 46777888999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 129 IRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 129 ~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
.+.+..++.-...+.+.++|.+....
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999999888888888888555433
No 229
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.50 E-value=6.1e-07 Score=102.04 Aligned_cols=158 Identities=11% Similarity=0.165 Sum_probs=113.8
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
...+.+|+--.+++.+... .-+| ..+.+.-.+-++.-+.++++++|+|+-+++..++++..+=++.+...
T Consensus 387 ~~lv~tFLfWHled~~~~~--~LfG--------v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIK--TLFG--------VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHhhcCCcc--eeee--------ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 3445566666677765221 1223 33444556667777888999999999999988887777666655442
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHH-HHHHHHHHhHHHHHHHhhchhH
Q 004750 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVF-WIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~-~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
.+.|..+..-++-+..++..+..+. .|++.+.||+.|+++.|+..... .+|--+|.+++|.+.+.+|.+.
T Consensus 457 --------~n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~t 527 (618)
T KOG3762|consen 457 --------QNPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGART 527 (618)
T ss_pred --------cCchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHH
Confidence 1345555555555666665554443 67899999999999999988664 7799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004750 685 VFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~ 702 (732)
.|.++++.|++..++...
T Consensus 528 tf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 528 TFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988877665443
No 230
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.49 E-value=4.3e-06 Score=93.20 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~~-lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
+.+..++............+++.++ ++. +...+++..+..++..++.+++++++||+|+|+++..+.++.+++.++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 3444555555555666666766665 454 467788888999999999999999999999999999999999999998
Q ss_pred HHhhh--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc-------chhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 90 MLWSP--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 90 ~a~a~--s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~-------k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
..+.+ +.+.+++.-++.|++.+..++...++++|..+. ++.|...++..+..-+|..++......
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 88876 899999999999999999999999999999873 345888999999988888888654443
No 231
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.48 E-value=2.8e-06 Score=96.98 Aligned_cols=153 Identities=20% Similarity=0.159 Sum_probs=124.2
Q ss_pred hcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Q 004750 546 LSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVL 625 (732)
Q Consensus 546 ~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (732)
...++.++.+.+.+++. ...+.+++.+.++++.||+|-|+++..+..+..++.+++.+..... .+..++.-++
T Consensus 65 ~~~~~ws~~~k~~i~ss-~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~------~~~~~~~R~l 137 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSS-FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG------FYLLLVLRFL 137 (466)
T ss_pred CceecCCHHHHHHHHHH-HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc------chhhHHHHHH
Confidence 34788999888888776 6799999999999999999999999999988888888887754422 2333444455
Q ss_pred HHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHHhc
Q 004750 626 YFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS-VGLAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~~~~~~~~ 704 (732)
-+.+.+..+ |....+++.-.|+..|++..++.....++|.++.-++.|.+.++ .||+.+|.++++++++..++.+.+.
T Consensus 138 qGl~~g~~~-pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 138 QGLGQGVLF-PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred hHHHHhHHH-hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 555555444 44456779999999999999999999999999999999999998 9999999999999988877766665
Q ss_pred cC
Q 004750 705 PE 706 (732)
Q Consensus 705 ~e 706 (732)
.+
T Consensus 217 ~d 218 (466)
T KOG2532|consen 217 SD 218 (466)
T ss_pred cC
Confidence 43
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=7.4e-07 Score=98.37 Aligned_cols=147 Identities=15% Similarity=0.147 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhccc
Q 004750 556 ASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFG 635 (732)
Q Consensus 556 ~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (732)
...++.....+..++.+++.|.++||+|+|..++.++.++..+.+++.+.-. .+..++.-.+=+.+......
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s--------y~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS--------YPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch--------hHHHHHHHHHhhhhHHHHHh
Confidence 3444456688999999999999999999999999999999998888877321 11223333333333332222
Q ss_pred chhhhhhccCCCccc-hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004750 636 PIPNILCSEIFPTRV-RGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 636 ~~~~~~~~e~~p~~~-r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~ 711 (732)
....+.++.+|.+. |+.++|+.-.+..+|.+++|.++|.+.+..|...+|+++++++++...+.++.++.++..+
T Consensus 179 -sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 179 -SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 22356789999877 5999999999999999999999999999999999999999999999999888887766544
No 233
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.23 E-value=6.4e-06 Score=90.33 Aligned_cols=180 Identities=15% Similarity=0.085 Sum_probs=116.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------------C---chhHHHHHHHHHHHHHHHHHHhH
Q 004750 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE---------------T---EPTIEGLIVAMSLIGATCITTCS 63 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~---------------~---s~s~~gll~Sl~~IG~~Ig~~~~ 63 (732)
|+..+.++.+++++.+..+....+..-+-..-...++. . .+-.-.+++ .+.-..|.++.
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllit---slaefPGlLIt 401 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLIT---SLAEFPGLLIT 401 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHH---HHhhCCchhHH
Confidence 45667788888888888877655544332222211110 0 011112222 33456788899
Q ss_pred HHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH
Q 004750 64 GAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 64 g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~ 143 (732)
+++.||+|||+.+...+++++++.++...+.+--...+.-|..-++..+.+.+.++|-.|.+|.+-|+...|.-+...-+
T Consensus 402 ~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI 481 (528)
T KOG0253|consen 402 GVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI 481 (528)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhh
Confidence 99999999999999999999999988877643322222223333344555677788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 144 GMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 144 G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|.++.++++ + ....+-..+..+.+.++++..++..++=-|+
T Consensus 482 ggI~~p~iA--~--~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 482 GGIFSPVIA--M--RAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhhHHH--H--HhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999996554 2 2222334455666666666665554443355
No 234
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.22 E-value=0.0023 Score=72.01 Aligned_cols=134 Identities=15% Similarity=0.160 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc
Q 004750 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (732)
Q Consensus 48 l~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~ 127 (732)
+.-+-.+-..+.-+++.+..+|+.-+.-+.+..++++++.++.+++++++.=+++-.+.+++.|..-.....+. ..+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-HhcCc
Confidence 44444455666667788888998866556667778888899999999999989999999999999888877764 46653
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004750 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 128 k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
...+-++.+.+.+.++|++.-..... ...+-|..+.+...+.++.++..++.+|.
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 24566677777777777544433322 22344777777777666655444444543
No 235
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.21 E-value=0.0098 Score=67.66 Aligned_cols=158 Identities=16% Similarity=0.068 Sum_probs=93.5
Q ss_pred CChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 004750 497 FSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAM 576 (732)
Q Consensus 497 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g 576 (732)
..|+..++.+...+-+-..++++. .++ +...+..|+...|+ ++. ....+-.+..+.++.|+++..
T Consensus 250 ~~w~~Y~~q~vflas~alalLY~T-VLs----f~~lmt~yl~~~G~---------s~~-~igi~R~~gav~Gl~gT~~~p 314 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLYFT-VLS----FGGLMTAYLKSQGY---------SPS-VIGIFRGLGAVFGLLGTWVYP 314 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHHHH-Hhc----CcHHHHHHHHHCCC---------CHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 466777765555555544444443 221 23344455555454 443 344445567888999999999
Q ss_pred hhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH--HHHHHhh-cccchhhhhhccCCCccchhh
Q 004750 577 RLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVL--YFCCFVM-GFGPIPNILCSEIFPTRVRGI 653 (732)
Q Consensus 577 ~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~e~~p~~~r~~ 653 (732)
++.+|+|..+.=+.++..-.+++.......+...... .......++. ...=+|. ++--...-+..|..|++.|++
T Consensus 315 ~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~--~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~ 392 (432)
T PF06963_consen 315 WLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF--SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGA 392 (432)
T ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhH
Confidence 9999999888877777766666665555444322110 1111111111 1111111 222233456689999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 004750 654 CIAICALVFWIGDIIVTY 671 (732)
Q Consensus 654 ~~gi~~~~~~ig~~i~~~ 671 (732)
..|+-+...++...+.-.
T Consensus 393 v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 393 VSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988887766533
No 236
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.18 E-value=0.028 Score=64.66 Aligned_cols=145 Identities=6% Similarity=0.035 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CchhHHHHHHHHHHHHHHHH-HHhHHHhhhhhCChHHHHHHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE---TEPTIEGLIVAMSLIGATCI-TTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~---~s~s~~gll~Sl~~IG~~Ig-~~~~g~LsDrfGrRkvLLigllL 82 (732)
.++.+++..++..+.... +-.+.+.+..+ .....+.++.+...+..++. .++.+++++|++|++++-+....
T Consensus 8 k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 344445555555554433 45567776652 13357888888777776666 89999999999999998887777
Q ss_pred HHHHHHHHHhh--h-----------------------------hHHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchh
Q 004750 83 YFIGGLVMLWS--P-----------------------------NVYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIR 130 (732)
Q Consensus 83 ~aIgslL~a~a--~-----------------------------s~~lLiI~R~l~G~g~G~~~~-~~~alIaE~fP~k~R 130 (732)
+.+..+++++. | +.|...+.-+..-+-.....+ ..+.++.|.++.++-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 77666665543 1 122333334444555555555 778999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 131 GLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 131 G~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
.+..++...+.++|..+++......
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999996555443
No 237
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.14 E-value=6.2e-05 Score=79.45 Aligned_cols=165 Identities=16% Similarity=0.150 Sum_probs=110.4
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004750 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
..+.+..|.|++-++.|+++ .....+.....++..+| ++.|.+.|++|.+.+++++.....++...+.+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq----------~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQ----------SQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred cccchhhhhHHHHHHhCCCH----------HHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999988877764 44555555666777665 78899999999999999999999999988766
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhccc-chhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchh
Q 004750 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFG-PIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLA 683 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~ 683 (732)
...-... .......+++.+..+.+.++. ......+.+.||. .||++.|+.-....+++.+.+.+...+... +..
T Consensus 86 ~~~~~i~---~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~ 160 (250)
T PF06813_consen 86 AVSGRIP---SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPS 160 (250)
T ss_pred HHhCccC---ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChH
Confidence 5432221 112333344444444443332 2333456688985 699999999999999999998888887765 334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 004750 684 GVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 684 ~~f~~~~~~~~i~~~~~~~~~~ 705 (732)
..+++.+....+..+....+++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhee
Confidence 4445555555444444444443
No 238
>PRK11462 putative transporter; Provisional
Probab=98.13 E-value=0.00042 Score=78.74 Aligned_cols=126 Identities=14% Similarity=0.210 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHH
Q 004750 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLAR 103 (732)
Q Consensus 26 ~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~--s~~lLiI~R 103 (732)
+....++.+...- +....+++.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-
T Consensus 248 ~~~~~y~~~y~~g--~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (460)
T PRK11462 248 GGAMMYYVTWILG--TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFI 325 (460)
T ss_pred HhHhhhhhhhhcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 3334455554433 344556777788888999999999999999999987765554444333333322 233444555
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004750 104 LLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 104 ~l~G~g~G~~~~~~~alIaE~fP-------~k~RG~~~~~~~~~~~~G~~ig~l~~l 153 (732)
++.|++.+...+...+++.|..+ .+..|...+...+..-+|..++.....
T Consensus 326 ~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 326 FVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788887777777788887776 333355566666777777777754443
No 239
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.08 E-value=7.9e-05 Score=79.50 Aligned_cols=120 Identities=14% Similarity=0.126 Sum_probs=95.1
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHH
Q 004750 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG-GLVMLWSPNVYVLLLARLLDGFG 109 (732)
Q Consensus 31 ~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg-slL~a~a~s~~lLiI~R~l~G~g 109 (732)
..++.||+ |+...+-+.+....-.++.+++.|.++||+|++.+.+.+..+..+. .....+ +++.=.+...++|+.
T Consensus 290 fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhh
Confidence 57788999 8999999999998889999999999999999998877765554443 333332 333334566778888
Q ss_pred HhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 110 ~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
....-...+..++-..|.++.|.+.++.+...++|.++.+++...
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 877766678888899999999999999999999999998655543
No 240
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.08 E-value=5.7e-05 Score=84.97 Aligned_cols=144 Identities=14% Similarity=0.132 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCChHHH-HHHHH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRRPML-IVSSV 81 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr----fGrRkvL-Ligll 81 (732)
.++..+...+...+....-...++++.+.+|+ +....+.+--...+...+.+++.|..+|| |||||.+ ..+.+
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGv--phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQSLGV--PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHcCC--CcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 33444444444444444445567888899999 66777777777778889999999999995 7877654 45566
Q ss_pred HHHHHHHHHHhhhhH-----------------HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhh-hhhHHHHHHHH
Q 004750 82 LYFIGGLVMLWSPNV-----------------YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGL-LNTLPQFTGCV 143 (732)
Q Consensus 82 L~aIgslL~a~a~s~-----------------~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~-~~~~~~~~~~~ 143 (732)
+.+++.++..++.++ .++++.--|.=++.-......-+++.|....+.+-+ +++.+..+.++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 666777777765433 344444445556666778889999999997666666 99999999999
Q ss_pred HHHHHHHHH
Q 004750 144 GMFLAYCMV 152 (732)
Q Consensus 144 G~~ig~l~~ 152 (732)
|.++|+...
T Consensus 191 GnvLGY~~g 199 (498)
T KOG0637|consen 191 GNVLGYALG 199 (498)
T ss_pred cceeeeecc
Confidence 999995444
No 241
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.07 E-value=0.003 Score=75.38 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHHHHHHHHhhh--------h
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGLVMLWSP--------N 95 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr-fGrRkvLLigllL~aIgslL~a~a~--------s 95 (732)
....+.++...+|+ +.+....+...+....-+..+++|+++|+ +|+++.++++.++..++.++.++.. .
T Consensus 7 ~aiLvlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 7 RTILVLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred HHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 34456677888898 77777778888888888889999999996 6999999999999999988877642 1
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch---hhhhhhHHHHHHHHHHHHHHHHHHHHHh-h----ccchhHHHH
Q 004750 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSL-M----TAPSWRLML 167 (732)
Q Consensus 96 ~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~---RG~~~~~~~~~~~~G~~ig~l~~l~~~l-~----~~~~Wr~~~ 167 (732)
....+++-++..+|.|++-++..+...|.+++++ |-....++..+.++|..++..+...... . ...+|...|
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 2346677788889999999999999999997543 5556666777778887777444332211 1 134799999
Q ss_pred HHHHHHHHHHHHH
Q 004750 168 GVLFIPSLIYFVL 180 (732)
Q Consensus 168 ~i~~~l~~i~~~l 180 (732)
.+.++..++.+++
T Consensus 165 ~i~~i~m~ia~lv 177 (654)
T TIGR00926 165 GVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 9998887776654
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.06 E-value=0.00033 Score=77.19 Aligned_cols=171 Identities=19% Similarity=0.216 Sum_probs=121.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-ChHHHHHHHHH
Q 004750 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVL 82 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfG-rRkvLLigllL 82 (732)
.|.+.+...+.++..+ +.-.-+|.|..|-|+ |..+.|++.+...+..+..++..-.+.+|.. +|+..+..+.+
T Consensus 210 aW~vtLfmGlqS~~~Y----~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYY----IVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHH----HHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 3444444444333333 333447999999999 9999999999999999999999999999765 77777777888
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch-hhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c
Q 004750 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI-RGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-A 160 (732)
Q Consensus 83 ~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~-RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~-~ 160 (732)
+.++.+.+.+.|....+.. -++.|+|.|..++....++.+..+..+ -+...++.|..+.+=..+| |...+.+.+ .
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~G--P~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFG--PWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhh--hhhHhHHHHhc
Confidence 8888888877765433333 489999999999999999998886443 3445555554444444444 333344433 3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHh
Q 004750 161 PSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
.+|+..+...+..+++..++.+.
T Consensus 361 gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHHhh
Confidence 58999998888877776655543
No 243
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.06 E-value=7.5e-05 Score=85.36 Aligned_cols=137 Identities=20% Similarity=0.169 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhcc
Q 004750 565 TLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSE 644 (732)
Q Consensus 565 ~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 644 (732)
++..++.+...|.++||+|||..+......+.+..+++.+-. ++.++ .....+..+...+....+.++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~----------~~~~~--~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG----------YWFFL--LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH----------HHHhh--hcccccchhhhhhhhhhheee
Confidence 677888899999999999999999888888877777766621 22222 222222233344556678899
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004750 645 IFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLE 713 (732)
Q Consensus 645 ~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~~~ 713 (732)
+...+.|...+|+.+...+.+..++|.+.+.+....|+..+|.+-+++.++..++..+++||+...+.+
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999998765543
No 244
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.03 E-value=7.4e-05 Score=85.49 Aligned_cols=164 Identities=18% Similarity=0.181 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 004750 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~ 94 (732)
.++.|.....+...+=.-.++++. .+...|.....-..+-++.-++++++..|+|+-+++.+++.+.++=.+...+..
T Consensus 380 av~mG~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc
Confidence 333444444444445556677776 677888888888888899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 004750 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIP 173 (732)
Q Consensus 95 s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~-~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l 173 (732)
|.|+.+..-+++|+..+.++.+..+|+....|++.|..+.++.+ .+.++|-.+|+++ ++......+=|..|.+.++.
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI--GG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI--GGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh--hhhhheeehhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876 4457777777443 34455667889999999998
Q ss_pred HHHHHHHHH
Q 004750 174 SLIYFVLTI 182 (732)
Q Consensus 174 ~~i~~~l~~ 182 (732)
|++.+++.+
T Consensus 536 cl~~l~~~~ 544 (618)
T KOG3762|consen 536 CLVTLALFI 544 (618)
T ss_pred HHHHHHHHH
Confidence 888776543
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.03 E-value=4.5e-05 Score=86.91 Aligned_cols=116 Identities=13% Similarity=0.137 Sum_probs=100.0
Q ss_pred HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHH
Q 004750 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW----------SPNVYVLLLAR 103 (732)
Q Consensus 34 ~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~----------a~s~~lLiI~R 103 (732)
..+|. ++.+.|++.+...++.+++....+++.+|++.|+++.++.++.+++.+...+ .++.+.++..-
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 45677 8999999999999999999999999999999999999999999888765431 13334555667
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004750 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 104 ~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~ 151 (732)
++.+++.+..+.+...++.+..|++.+|...++.+...++|..+++..
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999543
No 246
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.03 E-value=0.00028 Score=80.44 Aligned_cols=140 Identities=19% Similarity=0.230 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004750 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS 93 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a 93 (732)
.+++........+.+..+..+ +.++.++....+.......+.+++.+++..+++|+|+|+++.++.++.+++.++..+.
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~-y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVT-YVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEE-EEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444444454433 2333366677777777787888889999999999999999999999999999998886
Q ss_pred h--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc-------chhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004750 94 P--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 94 ~--s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~-------k~RG~~~~~~~~~~~~G~~ig~l~~l~ 154 (732)
+ +.+.+++..++.+++.+...+...++++|..+- +.-|...+...++.=+|.+++......
T Consensus 323 ~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 323 PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 788888889999999999999999999888752 334888888888888888888644433
No 247
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.02 E-value=3.4e-05 Score=68.35 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHH
Q 004750 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY 97 (732)
Q Consensus 18 ~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~ 97 (732)
.|..+..+.+.+|.+.++.++ |.++.|++.+..++||.+|.+...++.++..+++.+..++++..+.++.+++..+++
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 478899999999999999999 999999999999999999999999999998889999999999999999999988877
Q ss_pred HHH
Q 004750 98 VLL 100 (732)
Q Consensus 98 lLi 100 (732)
.+.
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 653
No 248
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.00 E-value=0.0028 Score=74.41 Aligned_cols=164 Identities=18% Similarity=0.182 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhhh--------
Q 004750 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPN-------- 95 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIgslL~a~a~s-------- 95 (732)
....+.++..+++. +.....-..+.+.-......+.+++++|-| ||-+++.++.++..++.++..++..
T Consensus 57 ~~nlv~ylt~~~~~--~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 57 VSNLVTYLTLELHA--SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hhHHHHHHHHHhcc--chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 35677899999998 666666677777777778889999999975 8889999998888888665544211
Q ss_pred -----------------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC---cchh---hhhhhHHHHHHHHHHHHHHHHH
Q 004750 96 -----------------VYVLLLARLLDGFGIGLAVTLVPIYISETAP---PEIR---GLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 96 -----------------~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP---~k~R---G~~~~~~~~~~~~G~~ig~l~~ 152 (732)
...+..+..+..+|.|+.-+...++-+|-++ ++++ ...+.++.+..++|..++ ..
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a--~t 212 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA--QT 212 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH--HH
Confidence 1355566677778999999999999999998 3222 245666777788888888 44
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhcc
Q 004750 153 FGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSK 195 (732)
Q Consensus 153 l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~ 195 (732)
.....-++.+|.+-|.+..+...+.+ ++|++-+|.|...+
T Consensus 213 ~~vyiq~~~~w~lgf~i~~~~~~lai---~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 213 VLVYIQDNVGWKLGFGIPTVLNALAI---LIFLPGFPFYRYKK 252 (571)
T ss_pred HHHhhhhcccceeeccHHHHHHHHHH---HHHHcCceeEEeeC
Confidence 34444467899999988877665533 34455555554443
No 249
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.97 E-value=8.6e-05 Score=84.51 Aligned_cols=147 Identities=22% Similarity=0.230 Sum_probs=108.7
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+|++.+++..+++ .++...-...+++||++|| +|+|++++.+.++++++.+++..... .......+.+.+..
T Consensus 56 Lg~~~~~A~~l~~-~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~------~~~~gl~i~L~~I~ 128 (498)
T COG3104 56 LGFDETHATGLFS-AYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSV------SGPGGLYIGLALII 128 (498)
T ss_pred CCcChHhhHHHHH-HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccc------ccccHHHHHHHHHH
Confidence 6678766666555 5666777788999999999 59999999999999999999887430 01122333333444
Q ss_pred HHHhhcccchhhhhhccCCCccc--hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHh
Q 004750 628 CCFVMGFGPIPNILCSEIFPTRV--RGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIK 703 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 703 (732)
++.+ .+=+-+..+..|++|++. |-.+.++.....++|++++|++.+++.+..||...|...++-..++.+..+..
T Consensus 129 iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~ 205 (498)
T COG3104 129 VGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG 205 (498)
T ss_pred hccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 4443 334455567788887632 56677778888899999999999999999999999999988888886665543
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.0001 Score=84.99 Aligned_cols=151 Identities=15% Similarity=0.087 Sum_probs=107.0
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
.++...+.+.+ ..++.++-+++.+.++.+.||++-.+.+..+. ++..++.+.... .++...++.+-++..
T Consensus 76 l~~~~~~l~~~-~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~----~~w~~~~~~~~~-----~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 76 LKLVGNQLGVL-DTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG----ILWGLFGFLTAA-----VHSFPGLIALRFLLG 145 (495)
T ss_pred cchhhhhhhhH-HHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH----HHHHHHHHHHHH-----HhhhHHHHHHHHHHH
Confidence 34444444444 45678889999999999999999444433322 222222211100 134455555555555
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH------HhhchhHHHHHHHHHHHHHHHHHHH
Q 004750 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL------NSVGLAGVFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~------~~~g~~~~f~~~~~~~~i~~~~~~~ 702 (732)
.+-.+..|....+++..+.++.|+.-+|+.++...+|+++++++...+. ...||++.|++-++++++..+++++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 5555555666677799999999999999999999999999999999874 3569999999999999999999999
Q ss_pred hccCCCC
Q 004750 703 KVPETKG 709 (732)
Q Consensus 703 ~~~et~~ 709 (732)
++|+...
T Consensus 226 ~lp~~P~ 232 (495)
T KOG2533|consen 226 FLPDNPS 232 (495)
T ss_pred EecCChh
Confidence 9986543
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.95 E-value=1.7e-07 Score=104.17 Aligned_cols=145 Identities=16% Similarity=0.169 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhccc
Q 004750 556 ASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFG 635 (732)
Q Consensus 556 ~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (732)
...+......++.++|.+++|++.||+|||+.+..+..+..++.++..+.... .+.+...+.-++.+++.+ +..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g-~~~ 120 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIG-GAY 120 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccc-ccc
Confidence 34455567789999999999999999999999999998888888877764210 011222222233333333 234
Q ss_pred chhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh---chhHHHHHHHHHHHHHHHHHHHhccCC
Q 004750 636 PIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV---GLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 636 ~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~---g~~~~f~~~~~~~~i~~~~~~~~~~et 707 (732)
+...+++.|..|++.|+...++.+....+|.+++..+.-.+.+.. +|+..+++.++.+++..+ ...++||+
T Consensus 121 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 121 VVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 455688899999999999999998888888877776655443333 378777776666665544 44668887
No 252
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.94 E-value=6.1e-05 Score=84.88 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=96.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH--HHHH
Q 004750 553 SASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLY--FCCF 630 (732)
Q Consensus 553 ~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 630 (732)
+.....+++.+..++.++|+++.|++.||+|||+++...+++++++-++..+.... ....-....+++| ..++
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~-----~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT-----TSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC-----CCCcchhhHHHHHHHHhhc
Confidence 34566677788899999999999999999999999999998888888755553221 1111222233333 3333
Q ss_pred hhcc-cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHH---HHhh------------chhHHHHHHHHHHH
Q 004750 631 VMGF-GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVL---LNSV------------GLAGVFGMYAVVCV 694 (732)
Q Consensus 631 ~~~~-~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l---~~~~------------g~~~~f~~~~~~~~ 694 (732)
++|- .|+..+.++|....+.||+-.+..-+++.+|...+..+.-.+ ++.. =||..|. ++.+-.
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~g-lg~vpa 235 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFG-LGAVPA 235 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH-HHHHHH
Confidence 3332 678888999999999999888777666655544443333322 2221 1443333 333333
Q ss_pred HHHHHHHHhccCCCCCC
Q 004750 695 ISWIFVFIKVPETKGMP 711 (732)
Q Consensus 695 i~~~~~~~~~~et~~~~ 711 (732)
+..+..-..+|||+..+
T Consensus 236 ~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 236 LLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHhhhcCCcchhHH
Confidence 33344455689998655
No 253
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.00035 Score=74.11 Aligned_cols=92 Identities=21% Similarity=0.353 Sum_probs=69.4
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004750 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~ 110 (732)
++-+.++. ...++|.+....+-...+...+.|-++||-|||+.-+.-++...++ .++-.+|.+-.++++|.|-|++.
T Consensus 62 yLYstYgF--gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 62 YLYSTYGF--GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeehhcCc--cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCCceEEEeehhhhhhHHH
Confidence 34455666 5677777777777777888889999999999999655555555443 33456789999999999999999
Q ss_pred hhHhHHHHHH-HHhcC
Q 004750 111 GLAVTLVPIY-ISETA 125 (732)
Q Consensus 111 G~~~~~~~al-IaE~f 125 (732)
+..+...-++ +.|.-
T Consensus 139 sLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9998887664 45554
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.90 E-value=0.00059 Score=67.19 Aligned_cols=107 Identities=21% Similarity=0.186 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc
Q 004750 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (732)
Q Consensus 48 l~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~ 127 (732)
-.++......+++++...+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+..++....++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 4455566678888889999999999999999999888654443 467788999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004750 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 128 k~RG~~~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
+.|++-.++.-.....+.++|.+.....
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888888888885554443
No 255
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.77 E-value=0.0014 Score=73.14 Aligned_cols=159 Identities=11% Similarity=0.042 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004750 13 IGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~~-lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a 91 (732)
++.++.--....+...++.+..+ .|+ +..+.....+.+..+.++|.+++.++..|+-..|.+.+..++..+-++..+
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~--~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGL--NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 33344333344455556655555 777 889999999999999999999999999999999999999988888888888
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004750 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
+++++..+ .+-++.|+..+..+|...+.-.+..| ++ ....+..-+...+|.++. |...+.+.+..+-+..+.+..
T Consensus 321 l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAii--P~l~G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 321 LIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAII--PPLQGVIADMFGIQLTFLIVP 395 (422)
T ss_pred HhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHH--HHHHHHHHHhhhhHHHHHHHH
Confidence 88885444 45678899999999999999999999 44 444555566777888887 777788888888888888667
Q ss_pred HHHHHHH
Q 004750 172 IPSLIYF 178 (732)
Q Consensus 172 ~l~~i~~ 178 (732)
.+|.++.
T Consensus 396 llc~lyV 402 (422)
T COG0738 396 LLCYLYV 402 (422)
T ss_pred HHHHHHH
Confidence 7777655
No 256
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.54 E-value=0.0026 Score=75.82 Aligned_cols=151 Identities=19% Similarity=0.296 Sum_probs=97.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhh-cccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMD-ISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d-~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+|.+.+.+..++.. +.....+..+++|++.| ++||+++++.+.++..++.+++.+..........+....+ +.+..
T Consensus 18 lg~~~~~A~~i~~~-f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l--~gLaL 94 (654)
T TIGR00926 18 LGFSESTSTVLFHT-FTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL--LGLAL 94 (654)
T ss_pred cCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH--HHHHH
Confidence 34555555555554 45555667778999999 4799999999988888888777663221111011111122 22222
Q ss_pred HHHhhc-ccchhhhhhccCCCcc---chhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------chhHHHHHHHHHHHHH
Q 004750 628 CCFVMG-FGPIPNILCSEIFPTR---VRGICIAICALVFWIGDIIVTYSLPVLLNSV-------GLAGVFGMYAVVCVIS 696 (732)
Q Consensus 628 ~~~~~~-~~~~~~~~~~e~~p~~---~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~-------g~~~~f~~~~~~~~i~ 696 (732)
...|.+ +-+...+...+.++++ .|-..+.+...+.++|+++++.+.+++.+.. +|...|.+.+++.+++
T Consensus 95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 333332 2233445667777643 3667888888899999999999999988554 5888888888888777
Q ss_pred HHHHHH
Q 004750 697 WIFVFI 702 (732)
Q Consensus 697 ~~~~~~ 702 (732)
.++...
T Consensus 175 ~lvf~~ 180 (654)
T TIGR00926 175 LIVFMA 180 (654)
T ss_pred HHHHHH
Confidence 666544
No 257
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.52 E-value=0.009 Score=67.01 Aligned_cols=148 Identities=13% Similarity=0.069 Sum_probs=117.5
Q ss_pred HHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh-hhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q 004750 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-WLGRRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARLL 105 (732)
Q Consensus 30 ~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD-rfGrRkvLLigllL~aIgslL~a~---a~s~~lLiI~R~l 105 (732)
||=.+-||+ +..+...+++....|..++....|++.. |.++++.-.+++.+.+++..+..+ ..+.+.+...-++
T Consensus 233 Pygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 566677899 8999999999999999999999999887 778888888888888777666544 4577899999999
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh-----h---ccchhHHHHHHHHHHHHHH
Q 004750 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-----M---TAPSWRLMLGVLFIPSLIY 177 (732)
Q Consensus 106 ~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l-----~---~~~~Wr~~~~i~~~l~~i~ 177 (732)
.|++.|...+...+.+.+...+++.|..+|.+.....+...++......... . ...++-.+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877776666433332221 1 2246777887777765554
Q ss_pred HH
Q 004750 178 FV 179 (732)
Q Consensus 178 ~~ 179 (732)
+.
T Consensus 391 ~~ 392 (403)
T PF03209_consen 391 LV 392 (403)
T ss_pred HH
Confidence 43
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.50 E-value=0.00079 Score=58.48 Aligned_cols=70 Identities=14% Similarity=0.159 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
..-+++.....+.+.|.+|...++.|+ +..++|++.++..+...++.+++|.++||+|+++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 344555555667777778888888999 9999999999999999999999999999999999887776554
No 259
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.49 E-value=0.0016 Score=74.60 Aligned_cols=149 Identities=12% Similarity=0.007 Sum_probs=102.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccc-hhHHHhhHHHHHHHHHHH-HHHHHhhcccchhhHHHHHHHHHHHHHHhh
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGR-RTLLLSTIPILITSLVVL-VLSSVIKMGSVVHASISTVSVVLYFCCFVM 632 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~gr-r~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (732)
+..+++.+...++.++++++.++...|.+. |+.++.+.++++++.++. .+.+.. +.+..++.+.=+.++++.
T Consensus 71 ~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~------~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 71 TFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP------NGVKYLMLVARILTGVGV 144 (488)
T ss_pred chhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHcCcCc
Confidence 345555666899999999999999999884 555666666666666665 332221 112333334444445555
Q ss_pred cccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------------chhHHHHHHHHHHHHHHHH
Q 004750 633 GFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV-------------GLAGVFGMYAVVCVISWIF 699 (732)
Q Consensus 633 ~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~-------------g~~~~f~~~~~~~~i~~~~ 699 (732)
+.....-.|.+...-.+.|.++++..+..+-+|.++||.+...+.... -+..+-|+.++++++..++
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 555666678888777788889999888888888888887776554321 1455778888889999888
Q ss_pred HHHhccCCCC
Q 004750 700 VFIKVPETKG 709 (732)
Q Consensus 700 ~~~~~~et~~ 709 (732)
+.++++|-..
T Consensus 225 i~~~f~E~~~ 234 (488)
T KOG2325|consen 225 ILFFFKEVYR 234 (488)
T ss_pred HHhheeeccc
Confidence 8888877543
No 260
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.46 E-value=0.016 Score=64.56 Aligned_cols=139 Identities=22% Similarity=0.170 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh-----hhCChHHHHH-HHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-----WLGRRPMLIV-SSVL 82 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD-----rfGrRkvLLi-gllL 82 (732)
..+.+-++++|...+.+. .+|.+.+.-|. |.++.+...-++. -...-++|..+.| |+||||..++ +..+
T Consensus 34 llLl~LYllQGiP~GL~~-~iP~lL~ak~v--Syt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~l 108 (510)
T KOG3574|consen 34 LLLLFLYLLQGIPLGLIG-AIPLLLQAKGV--SYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYL 108 (510)
T ss_pred HHHHHHHHHcCCchhHhh-hhHHHhcCCCc--chhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHH
Confidence 345566889999999888 99999998888 7777766543332 2234568888999 9999986443 3334
Q ss_pred HHHHHHHHHh-----------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004750 83 YFIGGLVMLW-----------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 83 ~aIgslL~a~-----------a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~ 151 (732)
.+..+.+.+. .|+...+...-++.-|..+.--.++-.+...+..+++-|.+.+-..++...|.+++..+
T Consensus 109 lG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 109 LGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 4444444443 24445555556677777777777888888888999999999999999999999988544
Q ss_pred H
Q 004750 152 V 152 (732)
Q Consensus 152 ~ 152 (732)
.
T Consensus 189 f 189 (510)
T KOG3574|consen 189 F 189 (510)
T ss_pred e
Confidence 3
No 261
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.43 E-value=0.0028 Score=71.66 Aligned_cols=122 Identities=21% Similarity=0.212 Sum_probs=87.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhH--HHHHHHHHHH--HH
Q 004750 554 ASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHAS--ISTVSVVLYF--CC 629 (732)
Q Consensus 554 ~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~ 629 (732)
..++.+.+.++.+..++..+.+.|+.||+|-|...+.+..+..++..+=.+........ +.+ +....-.+-. --
T Consensus 78 ~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~--~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 78 SSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPP--LFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccc--cchhhhhHHhHHHHHHhhh
Confidence 36788899999999999999999999999999999999999888887766654432111 222 1111111111 11
Q ss_pred HhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 004750 630 FVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV 680 (732)
Q Consensus 630 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~ 680 (732)
|.+++ +.=+..-.||+++|++|..+......+|..++..+-+.++.+.
T Consensus 156 Fim~l---PskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 156 FILGL---PSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred Hhhcc---ccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22222 2223345699999999999999999999999998888887654
No 262
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.36 E-value=0.4 Score=54.77 Aligned_cols=115 Identities=9% Similarity=0.023 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccch-hHHHhhHHHHHHHHHHHHHHHHhhcc-----cchhhHHHHHHHHHHHH
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRR-TLLLSTIPILITSLVVLVLSSVIKMG-----SVVHASISTVSVVLYFC 628 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr-~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 628 (732)
....+...++.++.++|..+..+..- .++| +.+.+...+=.+.+..+.+. ..... ...+.+..++..++++.
T Consensus 307 ~~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lc-n~~~~~~~p~~~~~d~~~~~~~~l~gl 384 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLC-NYPQRSRLPVFFPGDAYFIILMLLFGF 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHh-cCCccccCCeeecccHHHHHHHHHHHH
Confidence 35556667788999999886654321 2222 12222222222222222222 11110 00122333333333333
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004750 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
..| -.++....+.++..+++.|..+-.+...+-.+|-.+|..+
T Consensus 385 tnG-y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 385 SNG-YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhh-HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 2234555677888888888887777777777776666654
No 263
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.32 E-value=0.014 Score=64.58 Aligned_cols=152 Identities=16% Similarity=0.088 Sum_probs=90.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
+|++..+.+.++.. ..++.++...+.|.+.||+|||+..+...++..++++.... .+..+.++.-++-+.
T Consensus 64 yg~~~~qIa~Lf~~-Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~---------~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 64 YGFSEHQIAILFVA-GFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS---------SNYPVLLLGRVLGGI 133 (354)
T ss_pred cCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc---------cccHHHHHHHHHHHH
Confidence 45555566666654 45667777778899999999999888777777777654322 112233333333333
Q ss_pred HHhhcccchhhhhhcc----CCCccchhhHHHHHH-HHHHHHHHHHHhHHHHHHHhhch--hHHHHHHHHHHHHHHHHHH
Q 004750 629 CFVMGFGPIPNILCSE----IFPTRVRGICIAICA-LVFWIGDIIVTYSLPVLLNSVGL--AGVFGMYAVVCVISWIFVF 701 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e----~~p~~~r~~~~gi~~-~~~~ig~~i~~~~~~~l~~~~g~--~~~f~~~~~~~~i~~~~~~ 701 (732)
...+-+.+.=.=++.| -+|.+..+...+... ....+-.++...+.-++.+..|. ..+|..-.++.+++.+++.
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 3333222211112233 345555555555554 23344556666666666776654 6678877778788877777
Q ss_pred HhccCCCCC
Q 004750 702 IKVPETKGM 710 (732)
Q Consensus 702 ~~~~et~~~ 710 (732)
..-+|..|.
T Consensus 214 ~~W~ENyg~ 222 (354)
T PF05631_consen 214 KTWPENYGD 222 (354)
T ss_pred hcccccCCC
Confidence 777887665
No 264
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.02 E-value=0.017 Score=63.63 Aligned_cols=135 Identities=13% Similarity=0.164 Sum_probs=97.3
Q ss_pred HHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhh
Q 004750 53 LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGL 132 (732)
Q Consensus 53 ~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~ 132 (732)
.-.+.+.-++.=.+.|..--|+++++-.+.......+..+.++.+.+-+.-+..|...+.- .+.++++-+..+++++-+
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHH
Confidence 3445666667778899988899988888888888888889999999999999999877655 677889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 133 LNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 133 ~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+.+......-+|...|...+-.....+..+....=.+ .+.+..+..+..+++|..|
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchh-hHHHHHHHHHHHhhCCCCc
Confidence 9999988888888888544433333333343333322 2333333444556777654
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.61 E-value=0.021 Score=64.88 Aligned_cols=154 Identities=25% Similarity=0.265 Sum_probs=93.3
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcc-----cchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 004750 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDIS-----GRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVS 622 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~-----grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (732)
.+|.++++...+.. +..+--. .-++.|.++|-+ .||.-++++..+..++++.+.+... .. .......
T Consensus 19 ~l~ls~~~~~~~~~-~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~----~~--~s~~~~~ 90 (433)
T PF03092_consen 19 DLGLSPAQLQRLSS-LASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA----SE--SSAAIAV 90 (433)
T ss_pred HcCCCHHHHHHHHH-HHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc----cc--chhhhHH
Confidence 34556655444332 2222222 356888999975 3555555555555444444444211 11 1122222
Q ss_pred HHHHHHHHhhccc-chhhhhhccCC---CccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 004750 623 VVLYFCCFVMGFG-PIPNILCSEIF---PTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWI 698 (732)
Q Consensus 623 ~~~~~~~~~~~~~-~~~~~~~~e~~---p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~ 698 (732)
++++...++..+. ...-.+..|.. |.+ ++.-.+.+..+..+|++++.++.|++.+..+++..|.+.+.+.++..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 3333333333332 23344556655 444 788888999999999999999999999999999999999888888877
Q ss_pred HHHHhccCCCCC
Q 004750 699 FVFIKVPETKGM 710 (732)
Q Consensus 699 ~~~~~~~et~~~ 710 (732)
..++..+|.+.+
T Consensus 170 ~~~~~~~e~~~~ 181 (433)
T PF03092_consen 170 VALFLLEERKVR 181 (433)
T ss_pred HHHHhhhhcccc
Confidence 777777774433
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.60 E-value=0.13 Score=51.00 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhh-ccc
Q 004750 557 SLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVM-GFG 635 (732)
Q Consensus 557 ~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 635 (732)
..+......+...++.++.|++.||.|||+.+..+.....++.+...+... ...+..++.... .+++. ...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~g~~~~~~~ 112 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLL--QGLGGGGLL 112 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHH--HHhhhHHHH
Confidence 344445567777777799999999999997777666553333222222110 011111111111 22222 344
Q ss_pred chhhhhhccCCCc-cchhhHHHHHHH-HHHHHHHHHHhHHHHHHHh--hchhHHHHHHHHHH
Q 004750 636 PIPNILCSEIFPT-RVRGICIAICAL-VFWIGDIIVTYSLPVLLNS--VGLAGVFGMYAVVC 693 (732)
Q Consensus 636 ~~~~~~~~e~~p~-~~r~~~~gi~~~-~~~ig~~i~~~~~~~l~~~--~g~~~~f~~~~~~~ 693 (732)
+....+..|.+|. +.|+...++... ...+|.++++.+.+.+... .+|+..|.......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 5666788899987 668888888888 5777888888777666654 46666555444444
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.37 E-value=0.3 Score=56.39 Aligned_cols=124 Identities=8% Similarity=-0.016 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccch---------------h-h--
Q 004750 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVV---------------H-A-- 616 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------~-~-- 616 (732)
....+.........++..++.+++++|++|++++-......+..++++.+...+..+..+ . .
T Consensus 44 ~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i 123 (472)
T TIGR00769 44 IIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFI 123 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHH
Confidence 334444333333344447888999999999999887777777666666554332211100 0 0
Q ss_pred ----HHHHHHHHHHHHHHhhcccc-hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 004750 617 ----SISTVSVVLYFCCFVMGFGP-IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN 678 (732)
Q Consensus 617 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~ 678 (732)
.+......+..-.++....+ +.|.+.+|++..++-.+-+++..+..++|.++++.+..++.+
T Consensus 124 ~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 124 AILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222222233333333 668899999999999999999999999999999999988774
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.24 E-value=0.024 Score=49.27 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=50.3
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHH
Q 004750 519 ILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPI 594 (732)
Q Consensus 519 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~ 594 (732)
.+..+++...+.-|.|.++++.|++ + ....++..+..+..+++.++.|+++||++|++.++....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~---------~-~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLS---------P-SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCC---------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3344455677888999999987655 3 5566667778899999999999999999999887655433
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.11 E-value=0.028 Score=61.86 Aligned_cols=104 Identities=14% Similarity=0.254 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc---hhhhhhhHHHHHH
Q 004750 74 PMLIVSSVLYFIGGLVMLWS--P-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE---IRGLLNTLPQFTG 141 (732)
Q Consensus 74 kvLLigllL~aIgslL~a~a--~-------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k---~RG~~~~~~~~~~ 141 (732)
|+++++.++..+|.++..++ + +.+.++++-++.++|.|+.=|....+++|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888885443 2 2257888899999999999999999999999865 4566777888999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004750 142 CVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 142 ~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
++|..++. .....+.+..+|.+.|++.++..++.++
T Consensus 82 n~G~~~~~--~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 82 NIGSLFSP--TLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHH--HCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhc--ccchhhccccchhhhhhHHHHHHHHHHH
Confidence 99999984 3344455678999999999887776554
No 270
>PRK03612 spermidine synthase; Provisional
Probab=96.00 E-value=0.79 Score=53.61 Aligned_cols=158 Identities=11% Similarity=-0.007 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH---HHHHHH--
Q 004750 17 LQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF---IGGLVM-- 90 (732)
Q Consensus 17 ~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~a---IgslL~-- 90 (732)
+.|...-..-.+... +.--+|. +...++++.+++.+|.++|+.+++++.++.-++ ...+-+.+.. ++..+.
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~ 101 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYA 101 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 334443333333333 3344676 788999999999999999999998876432222 2221111111 111111
Q ss_pred --HhhhhH-HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004750 91 --LWSPNV-YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 91 --a~a~s~-~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~ 167 (732)
.+...+ ..++..-++.|+..|+..|....+..+... ++-|...|-......+|.++|.+......+ ...|-....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl-p~lG~~~t~ 179 (521)
T PRK03612 102 AFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL-PRLGLIRTA 179 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH-HhcchHHHH
Confidence 111111 223344567788888888887777765432 223455566666777777777555433332 223433334
Q ss_pred HHHHHHHHHHHH
Q 004750 168 GVLFIPSLIYFV 179 (732)
Q Consensus 168 ~i~~~l~~i~~~ 179 (732)
++.+.+.++..+
T Consensus 180 ~~~a~l~~~~a~ 191 (521)
T PRK03612 180 ALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHH
Confidence 444444444443
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.90 E-value=1.9 Score=48.94 Aligned_cols=120 Identities=11% Similarity=0.002 Sum_probs=59.5
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc
Q 004750 555 SASLLISGI-TTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 555 ~~~~~~~~i-~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (732)
....+.... +.+..++|.+...++.+.-.|+....+.+-...+-++.+.-+.. ......+.++.++..++++..-| -
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~-~~v~~~~~~~~~~l~~~lglsnG-Y 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPP-LPVVFESDGWFIFLMSLLGLSNG-Y 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCC-CCceecCchHHHHHHHHHHhccc-h
Confidence 455555555 78888888777777666655554444433333333333222100 00001122233333333222221 2
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 004750 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL 677 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~ 677 (732)
+.++...+.++-.|++.+ .+.|..+.+.-++++....+.+++.
T Consensus 360 ltsl~m~~aPk~v~~~e~-e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEK-EAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred HhhheehhcCCCCChHHH-HHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 344556677788887755 4555555566555555555555543
No 272
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.87 E-value=0.47 Score=54.61 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhh---hhhCChHHHHHHHHHHH
Q 004750 11 AAIGNLLQGWDNATIAGAVLY---IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIA---DWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~---I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~Ls---DrfGrRkvLLigllL~a 84 (732)
+....+..|+.......+.|. .....+.+ +....++..-...+|..++..+.+.++ +++||++.++++.++..
T Consensus 245 L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n-~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~ 323 (461)
T KOG3098|consen 245 LFPFFFYTGLETSFWISIYPTCISFTRKLGSN-TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHL 323 (461)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhhhhccCc-chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHH
Confidence 334444445544444444442 22222221 334445555555566666666677776 56899999999988888
Q ss_pred HHHHHHHhh------------------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHH
Q 004750 85 IGGLVMLWS------------------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMF 146 (732)
Q Consensus 85 IgslL~a~a------------------~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ 146 (732)
++.++.-.. +++...++.-++.|++-+......+.++...+| ++|..+.++.-...+++..
T Consensus 324 ~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 324 IGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHH
Confidence 877766542 246788888999999999999999999999994 7788888888777777776
Q ss_pred HH
Q 004750 147 LA 148 (732)
Q Consensus 147 ig 148 (732)
++
T Consensus 403 v~ 404 (461)
T KOG3098|consen 403 VA 404 (461)
T ss_pred HH
Confidence 65
No 273
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.79 E-value=1.3 Score=51.42 Aligned_cols=140 Identities=16% Similarity=0.148 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhh-----hhhCChHHHHHHH-H
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIA-----DWLGRRPMLIVSS-V 81 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~--lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~Ls-----DrfGrRkvLLigl-l 81 (732)
++.+-++++|...+.....+|.+.++ -+. +.++.|.+.-+.. -+ -.-++|..+. .|+||||..++=. .
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~fSla~~-Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIFSLASY-PF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCC--ChhHheeeeeeec-hh-HHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 45667888999888866788999988 666 7788766432211 11 1223444554 5899998755421 2
Q ss_pred HHHHHHHHHHhhh------------------------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHH
Q 004750 82 LYFIGGLVMLWSP------------------------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP 137 (732)
Q Consensus 82 L~aIgslL~a~a~------------------------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~ 137 (732)
+.++..+..+..- +...+...-++.=+-.+.--.++--+.-.+..+++++.+.+-.
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcq 159 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQ 159 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHH
Confidence 2222222222111 1112222222333333333344445556667888999998888
Q ss_pred HHHHHHHHHHHHHHHH
Q 004750 138 QFTGCVGMFLAYCMVF 153 (732)
Q Consensus 138 ~~~~~~G~~ig~l~~l 153 (732)
.++.+.|.+++....+
T Consensus 160 tvG~~~Gyfls~tvFl 175 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFL 175 (544)
T ss_pred HhHhhhhHHHHHHHHH
Confidence 8888888888854443
No 274
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.74 E-value=0.33 Score=51.84 Aligned_cols=57 Identities=12% Similarity=0.340 Sum_probs=42.3
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHH---HhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004750 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM---SLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 128 k~RG~~~~~~~~~~~~G~~ig~l~~l~~---~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
++|+....+...++++|.++..+|.... .......|++++.+.+++.++-+++.+++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888888999999999997665444 12223479999999999888766654433
No 275
>PRK03612 spermidine synthase; Provisional
Probab=95.56 E-value=0.9 Score=53.12 Aligned_cols=50 Identities=16% Similarity=0.289 Sum_probs=36.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHH-hhchhHHHHHHHHHHHHHHHHH
Q 004750 651 RGICIAICALVFWIGDIIVTYSLPVLLN-SVGLAGVFGMYAVVCVISWIFV 700 (732)
Q Consensus 651 r~~~~gi~~~~~~ig~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~~~~ 700 (732)
-+...|-..++..+|+++|++++++++- ..|.....++++++.+++.+++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3566788888999999999999998775 6776666666665555444433
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.48 E-value=0.41 Score=47.25 Aligned_cols=105 Identities=10% Similarity=-0.069 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhh
Q 004750 562 GITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNIL 641 (732)
Q Consensus 562 ~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (732)
.+......++.++++.+.+++|.|..++++.....+-....... +.+..+...++.+++.+..+.+.. .+
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~---------~~~~l~~~s~l~G~~~a~lW~aqg-~y 113 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP---------NSYTLYPASALLGFGAALLWTAQG-TY 113 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHhhhhHHhhHhhh-HH
Confidence 33445566677788899999999998888776665444433220 233444444555555555454443 45
Q ss_pred hccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHH
Q 004750 642 CSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVL 676 (732)
Q Consensus 642 ~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l 676 (732)
..+...++.+++..++...+...+.++|..+.-.+
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888888899999988888888777776655444
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.42 E-value=0.52 Score=53.90 Aligned_cols=141 Identities=14% Similarity=0.120 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004750 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL 89 (732)
...++..+.++.--.+...+..+...-|+ ++..+|..-++..+..+.+..+..++.+|+|..+.=+++.....++..+
T Consensus 262 las~alalLY~TVLsf~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 262 LASFALALLYFTVLSFGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 34444444444333334444444445599 9999999999999999999999999999999988888777665554444
Q ss_pred HHh---hh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 90 MLW---SP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 90 ~a~---a~-------s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
+.. .+ +...++.+-.+.=+|.=+.-.+..-++-|..|.++||..++.-....++-..+.....
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 332 22 2334444444444444445566777888999999999999998777777666664443
No 278
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.68 E-value=0.43 Score=54.00 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH--H-
Q 004750 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY--F- 84 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~--a- 84 (732)
.+-+++.++.....++.+.+.+..= .++.- ...+.-+...++.+|-.++.--... +--|++.+...+-. .
T Consensus 249 miPL~lVY~aEY~InqGv~~tl~fp-~~~~~--~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~ 321 (402)
T PF02487_consen 249 MIPLFLVYFAEYFINQGVAPTLLFP-NSFFS--PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLV 321 (402)
T ss_pred HHHHHHHHHHHHHHHhchHHHhcCC-ccCCC--HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHH
Confidence 3345566666666666555443211 11221 3456677777788776666432221 22244333332221 1
Q ss_pred --HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 85 --IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 85 --IgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
+....+-+.+++|.+++.-+..|+..|..++-....+.|-.|+++|-.+++..+++-++|..++.+..
T Consensus 322 ~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 322 FLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 12222334688999999999999999999999999999999999999999999999999999986554
No 279
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.57 E-value=3 Score=48.53 Aligned_cols=142 Identities=11% Similarity=0.007 Sum_probs=85.2
Q ss_pred HHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc---
Q 004750 535 QILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG--- 611 (732)
Q Consensus 535 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~--- 611 (732)
.++.+..........|-+. ...+=.....-+.++...+-.++.++++|.++.-..+......+.++++...+..+
T Consensus 41 ~~lR~~KD~lvvt~~gae~--I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lh 118 (491)
T PF03219_consen 41 TILRDLKDTLVVTAQGAEV--IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILH 118 (491)
T ss_pred HHHHHhcCeEEEecCChhH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcC
Confidence 3555655555444443332 22222222233445566678899999999998877776666666666554333111
Q ss_pred cch-----------h-hH-HHHH----HHHHHH--HHHhhcccc-hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHh
Q 004750 612 SVV-----------H-AS-ISTV----SVVLYF--CCFVMGFGP-IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTY 671 (732)
Q Consensus 612 ~~~-----------~-~~-~~~~----~~~~~~--~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~ 671 (732)
.+. + .+ +.++ ..++|. -.++....+ +-|.++.|+++.+.-.+-+++..+..++|.++++.
T Consensus 119 p~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~ 198 (491)
T PF03219_consen 119 PDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQ 198 (491)
T ss_pred CCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00 0000 111222 223222222 45889999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004750 672 SLPVLLN 678 (732)
Q Consensus 672 ~~~~l~~ 678 (732)
+..++.+
T Consensus 199 ~~~~~~~ 205 (491)
T PF03219_consen 199 LTSYFSS 205 (491)
T ss_pred HHHHHHH
Confidence 9888877
No 280
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.56 E-value=1.7 Score=49.44 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=89.2
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004750 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
.|++..+...-+..+.+=+.+...+....+.|.++.|++++.+.+..++..+++.+. -.+..+.+..+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~------------~sv~~mq~~q~ 102 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG------------TSVLAMQLMQF 102 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH------------CcHHHHHHHHH
Confidence 345555555555555666667777788889999999999988887777666665552 12223333333
Q ss_pred HHhhcccc--hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHhc
Q 004750 629 CFVMGFGP--IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG--LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 629 ~~~~~~~~--~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g--~~~~f~~~~~~~~i~~~~~~~~~ 704 (732)
+|++.... ..+.++--..|++..-++.+.+.+..-+|.+++..++-.+....+ +...+.+-.+...++ ++..+++
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a-~~~~~fL 181 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA-LLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHc
Confidence 33333222 223455566788888889999999998898888888877776433 333333333323333 3344456
Q ss_pred cCC
Q 004750 705 PET 707 (732)
Q Consensus 705 ~et 707 (732)
|..
T Consensus 182 P~~ 184 (412)
T PF01770_consen 182 PMP 184 (412)
T ss_pred CCC
Confidence 644
No 281
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.38 E-value=13 Score=43.31 Aligned_cols=147 Identities=10% Similarity=0.091 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004750 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~-~s~s~~gll~Sl~~I-G~~Ig~~~~g~LsDrfGrRkvLLigllL~ 83 (732)
.-.+.+++..++..+..+.. -.+++.+=++ ..+..+..+-....+ +..+...+..++++++++.+++-+....+
T Consensus 24 ~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34455555666665554443 2233222110 023444455443333 44566778899999999999888776666
Q ss_pred HHHHHHHHhh---------hh----------------------HHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchhh
Q 004750 84 FIGGLVMLWS---------PN----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRG 131 (732)
Q Consensus 84 aIgslL~a~a---------~s----------------------~~lLiI~R~l~G~g~G~~~~-~~~alIaE~fP~k~RG 131 (732)
.....++++. ++ .|...+.-++.-+-.....+ ..+.+..|.++.++-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 5555555441 11 12222222222222223333 4678899999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Q 004750 132 LLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 132 ~~~~~~~~~~~~G~~ig~l~~l~~~ 156 (732)
+..++...+.++|.+++........
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865554443
No 282
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.08 E-value=0.11 Score=59.34 Aligned_cols=162 Identities=19% Similarity=0.162 Sum_probs=89.9
Q ss_pred hhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 004750 500 KDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLM 579 (732)
Q Consensus 500 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~ 579 (732)
.+..++...+.++....+....|+. ...=..|++.++.++|+.. . ....+-...-+.+++-.++.|..+
T Consensus 23 ~~~~~ps~~~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvph---------k-~~S~iw~~gPi~G~~vQP~vG~~S 91 (498)
T KOG0637|consen 23 FDLSRPSRLRKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPH---------K-WSSIIWLCGPLSGLLVQPLVGSAS 91 (498)
T ss_pred ccccCCcchHHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCc---------c-cccccccccccccceecccccccc
Confidence 3444444335566666666777774 3445667777888877653 2 222222334566777788999999
Q ss_pred hc----ccchhHHHhhHHHH-HHHHHHHHHHHHhh--c-ccchhhHHHHHHHHHHH-------HHHhhcccchhhhhhcc
Q 004750 580 DI----SGRRTLLLSTIPIL-ITSLVVLVLSSVIK--M-GSVVHASISTVSVVLYF-------CCFVMGFGPIPNILCSE 644 (732)
Q Consensus 580 d~----~grr~~~~~~~~~~-~i~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~e 644 (732)
|| +|||+..+.....+ .++++.+.....+. + ++... ..-...+.++. +......+|. -++..+
T Consensus 92 Drc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~-~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~D 169 (498)
T KOG0637|consen 92 DRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK-PVKPRAIVLFILGFWLLDVANNTLQGPC-RALLAD 169 (498)
T ss_pred cccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc-ccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHH
Confidence 95 78887665544443 44444333322211 1 11111 01111122222 2222223333 367788
Q ss_pred CCCccchhh-HHHHHHHHHHHHHHHHHhHHH
Q 004750 645 IFPTRVRGI-CIAICALVFWIGDIIVTYSLP 674 (732)
Q Consensus 645 ~~p~~~r~~-~~gi~~~~~~ig~~i~~~~~~ 674 (732)
+...+.+.+ +.+...++..+|+.++=...+
T Consensus 170 l~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 170 LARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 888877777 999999999998887744443
No 283
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.02 E-value=0.29 Score=53.97 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=75.7
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHhhcccc-hhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCcc---chhhHHHHHHH
Q 004750 586 TLLLSTIPILITSLVVLVLSSVIKMGSV-VHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTR---VRGICIAICAL 660 (732)
Q Consensus 586 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~---~r~~~~gi~~~ 660 (732)
++++.+.++..++.+++.+......... .......+.+.+ ...|.| +=|...++..|.++++ .|..++.....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~l--ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLAL--IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHH--HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHH--HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHH
Confidence 4667777888888888777655433211 111222233333 333333 3355557778888765 35567777888
Q ss_pred HHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHh
Q 004750 661 VFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIK 703 (732)
Q Consensus 661 ~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~~~~~~~ 703 (732)
+.++|.++++...+++-+..||...|++.++..+++.+.++..
T Consensus 80 ~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999888888886655543
No 284
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=93.01 E-value=22 Score=41.43 Aligned_cols=143 Identities=10% Similarity=0.071 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004750 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~-~s~s~~gll~Sl~~I-G~~Ig~~~~g~LsDrfGrRkvLLigllL~aIg 86 (732)
+.+++..++.++.... +-.+.+.+-+. ..+.....+-+..-+ +..+..++.+++.+++-+.+++-+.+..+...
T Consensus 30 lpl~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~f 105 (509)
T COG3202 30 LPLALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGF 105 (509)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 3444444454554333 34556666542 245667777777777 67888899999999999999998888877777
Q ss_pred HHHHHhh---------hh-----------------------HHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchhhhh
Q 004750 87 GLVMLWS---------PN-----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRGLL 133 (732)
Q Consensus 87 slL~a~a---------~s-----------------------~~lLiI~R~l~G~g~G~~~~-~~~alIaE~fP~k~RG~~ 133 (732)
.+++++. ++ .|...+.-.+.=+-.....+ .......|.+..++-.+.
T Consensus 106 F~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRF 185 (509)
T COG3202 106 FALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRF 185 (509)
T ss_pred HHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Confidence 7777652 11 02222222222222233333 556778899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 004750 134 NTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 134 ~~~~~~~~~~G~~ig~l~~l~~ 155 (732)
.++++.+.+++..++.......
T Consensus 186 y~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 186 YPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986555443
No 285
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.36 E-value=0.037 Score=64.74 Aligned_cols=130 Identities=14% Similarity=0.047 Sum_probs=1.3
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh--hc--c--c--------
Q 004750 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI--KM--G--S-------- 612 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~--~~--~--~-------- 612 (732)
++|++++++. .++...+-++.++..++..++..|..|-+.+-.+.++++++.+++++=... .. . .
T Consensus 31 rRF~l~S~~~-G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~ 109 (539)
T PF03137_consen 31 RRFGLSSSQS-GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSI 109 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccccc
Confidence 4788888654 455566889999999999999999888888888888888888887652111 00 0 0
Q ss_pred ------------------------chhhHHHHHHHHHHHHHHhhcccc---hhhhhhccCCCccchhhHHHHHHHHHHHH
Q 004750 613 ------------------------VVHASISTVSVVLYFCCFVMGFGP---IPNILCSEIFPTRVRGICIAICALVFWIG 665 (732)
Q Consensus 613 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~gi~~~~~~ig 665 (732)
....+..+..+++-.+..|+|..| +..+|+-|.++++.-+..+|+..++..+|
T Consensus 110 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lG 189 (539)
T PF03137_consen 110 SSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILG 189 (539)
T ss_dssp ------------------------------------------SSS-----------------------------------
T ss_pred ccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhcc
Confidence 000111122223333334444433 44578889999999999999999988888
Q ss_pred HHHHHhHHHHHH
Q 004750 666 DIIVTYSLPVLL 677 (732)
Q Consensus 666 ~~i~~~~~~~l~ 677 (732)
-++|=.+++..+
T Consensus 190 Pa~Gf~lg~~~L 201 (539)
T PF03137_consen 190 PALGFLLGSFCL 201 (539)
T ss_dssp ------------
T ss_pred HHHHHHHHHHHH
Confidence 887766666655
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.46 E-value=3.3 Score=50.22 Aligned_cols=163 Identities=13% Similarity=0.039 Sum_probs=103.5
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh---------h----ccc-
Q 004750 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI---------K----MGS- 612 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~---------~----~~~- 612 (732)
+++++++.+ +.++...+-++.++..+...+..-|.-|-+++-.+..++.++.+++.+--.. . ...
T Consensus 125 rRF~i~Ss~-sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 125 RRFKISSSQ-SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhcCCCCCc-ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 367888865 5555566788888888888899999988899999999998888887652111 0 000
Q ss_pred --------------------------chhhHHHHHHHHHHHHHHhhcccc---hhhhhhccCCCccchhhHHHHHHHHHH
Q 004750 613 --------------------------VVHASISTVSVVLYFCCFVMGFGP---IPNILCSEIFPTRVRGICIAICALVFW 663 (732)
Q Consensus 613 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~gi~~~~~~ 663 (732)
....+...+.+++-....|+|-.| +-..|+-|-.-++.-...+|+...+.-
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 011111222333333444444433 445777888888888889999988888
Q ss_pred HHHHHHHhHHHHHHHhh------------------c-hhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004750 664 IGDIIVTYSLPVLLNSV------------------G-LAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 664 ig~~i~~~~~~~l~~~~------------------g-~~~~f~~~~~~~~i~~~~~~~~~~et~~~~ 711 (732)
+|-++|=.+++++.+.+ | |+.-|++.+.+.++..+. +++.|.+..++
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p-~f~fPk~lp~~ 349 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP-LFFFPKELPKS 349 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH-HHhCcccCccc
Confidence 88888877777765421 2 334455555555555444 44567655443
No 287
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.44 E-value=74 Score=37.30 Aligned_cols=113 Identities=8% Similarity=-0.060 Sum_probs=71.1
Q ss_pred HHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhccc-------------chh-h---------HHHHHHH
Q 004750 567 LMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGS-------------VVH-A---------SISTVSV 623 (732)
Q Consensus 567 ~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~-~---------~~~~~~~ 623 (732)
++++..++..++.++..|.++..+.+......++++++..++..+. ... . .++....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 5666677777888888888887766666666665555544321100 000 0 0111222
Q ss_pred HHHHHHHhhcccc-hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 004750 624 VLYFCCFVMGFGP-IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS 679 (732)
Q Consensus 624 ~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~ 679 (732)
.+..-.++....+ +.|....|++..+.-.+-+++.++..+++.+++..+..++.+.
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2222223322222 4567889999999999999999999999999999988887753
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=84.07 E-value=8.2 Score=44.23 Aligned_cols=106 Identities=16% Similarity=0.102 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhhCCh-HHHHHHHHHHHHHHH---HHHh---------hhhHHHHHHHHHHHHHHHhh
Q 004750 46 GLIVAMSLIGATCITTCSGAIADWLGRR-PMLIVSSVLYFIGGL---VMLW---------SPNVYVLLLARLLDGFGIGL 112 (732)
Q Consensus 46 gll~Sl~~IG~~Ig~~~~g~LsDrfGrR-kvLLigllL~aIgsl---L~a~---------a~s~~lLiI~R~l~G~g~G~ 112 (732)
-+...++.++-.+|..+..+.. .-.+| +.+.+..++-.+..- +|.. -++-+..++.-++.|+..|-
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy 388 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGY 388 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhH
Confidence 4566677777777776554321 11223 133333333332222 2221 13557777889999999999
Q ss_pred HhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 113 AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 113 ~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
.....+.+..+..++++|..+..+..++..+|..+|....
T Consensus 389 ~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 389 LGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999985543
No 289
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=83.51 E-value=7.3 Score=34.79 Aligned_cols=67 Identities=22% Similarity=0.204 Sum_probs=51.4
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004750 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
+.-.+|.+.++.++ +. ..+.++.....++-++|.+...++.++.++++.+..++....++.+.+.+.
T Consensus 11 yTplLP~M~~~~~l---------s~-~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 11 YTPLLPLMQADGGL---------SL-SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHhHhHHHHHhcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777776554 44 445555667889999999999999999888888888888888888877774
No 290
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=82.92 E-value=37 Score=40.49 Aligned_cols=150 Identities=18% Similarity=0.148 Sum_probs=90.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHHHHHHHHHHHHhhccc-----------chhhHHH
Q 004750 552 SSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILITSLVVLVLSSVIKMGS-----------VVHASIS 619 (732)
Q Consensus 552 ~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~ 619 (732)
+...++...+. .........+++++++|- +||-+++.++..+..++++++.+......-. .-...-.
T Consensus 71 ~~~~aa~~v~~-f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~ 149 (571)
T KOG1237|consen 71 SGGGAANNVNA-FGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSK 149 (571)
T ss_pred chHHHHHHHHH-HhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcch
Confidence 33344444443 444455567889999995 6999999998888888877776654432110 0011112
Q ss_pred HHHHHHHHHHHhhc-----ccchhhhhhccCCC----ccchh--hHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHH
Q 004750 620 TVSVVLYFCCFVMG-----FGPIPNILCSEIFP----TRVRG--ICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGM 688 (732)
Q Consensus 620 ~~~~~~~~~~~~~~-----~~~~~~~~~~e~~p----~~~r~--~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~ 688 (732)
....++|...+-.+ .-+....+-+|-++ .+.+. .-+.......++|.+++..+..+.-+..||..-|.+
T Consensus 150 ~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i 229 (571)
T KOG1237|consen 150 LQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGI 229 (571)
T ss_pred HHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccH
Confidence 22233333333222 22333455566666 22233 445555666677888888887777788999999998
Q ss_pred HHHHHHHHHHHHHH
Q 004750 689 YAVVCVISWIFVFI 702 (732)
Q Consensus 689 ~~~~~~i~~~~~~~ 702 (732)
..++.+++.++++.
T Consensus 230 ~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 230 PTVLNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHHHHc
Confidence 88888777665544
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=80.13 E-value=59 Score=37.15 Aligned_cols=28 Identities=7% Similarity=-0.162 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHH
Q 004750 512 MVGVGIQILQQLSGINGVLYYTPQILEQ 539 (732)
Q Consensus 512 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 539 (732)
++.+++...-.+.-+|.+..-.+.+.+.
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~ 47 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYR 47 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhh
Confidence 3333333333333456566656655554
No 292
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=72.70 E-value=1.2 Score=48.31 Aligned_cols=111 Identities=9% Similarity=-0.008 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcc-cchhHHHhhHHHHHHHHHHHHHHHHh-hcc--c--chhhHHHHHHHHHHHHHHhhc
Q 004750 560 ISGITTLLMLPSIAVAMRLMDIS-GRRTLLLSTIPILITSLVVLVLSSVI-KMG--S--VVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 560 ~~~i~~~~~l~~~~i~g~l~d~~-grr~~~~~~~~~~~i~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~~~ 633 (732)
...++.++.++|..+..+..-+. .+|.+.. ....=.+.+.++.+.... ..+ . ..+.+..++.+++++...| -
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG-y 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG-Y 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc-h
Confidence 34567889999998888753221 2343332 222222222222222111 100 0 0011222222222222222 2
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004750 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
..++...+.++..+++.|..+-.+...+-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888888777777666666666665543
No 293
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=71.37 E-value=39 Score=37.63 Aligned_cols=136 Identities=11% Similarity=0.046 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC
Q 004750 46 GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (732)
Q Consensus 46 gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~f 125 (732)
|.+.-.-.+-..+..+.+....||+---.-..+..++.+.+.++.+++.+.++-+++-.+..++.|..-....++-+. +
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence 334444445556666677778888653333344556777788888899999988888888888877765555544333 3
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004750 126 PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 126 P~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|+. ..+-++.+.+....+|..--..+......+-|...++...+..+.+...++.++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 321 222233333333344422211111112345566666666555554443333343
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.67 E-value=56 Score=37.44 Aligned_cols=84 Identities=20% Similarity=0.302 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHH--HHHHHHHHHHHHHHHHHhhhhh-----
Q 004750 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASL--LISGITTLLMLPSIAVAMRLMD----- 580 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~--~~~~i~~~~~l~~~~i~g~l~d----- 580 (732)
++.+++..+++..+..- .++..-.|.+++.-+.+. ++.+. +....+.+ -++...++|
T Consensus 30 ~~~illLl~LYllQGiP--~GL~~~iP~lL~ak~vSy---------t~~a~fS~ay~P~sL-----KllWaPiVDs~y~k 93 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIP--LGLIGAIPLLLQAKGVSY---------TSQAIFSFAYWPFSL-----KLLWAPIVDSVYSK 93 (510)
T ss_pred hhhHHHHHHHHHHcCCc--hhHhhhhHHHhcCCCcch---------hhhhhhhhhhhHHHH-----HHHHHhhhHHHHHH
Confidence 45555666666555432 344447888888654432 11111 11112222 234455666
Q ss_pred cccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004750 581 ISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 581 ~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
|+|||+..++-.- ..+++++..+.+.+
T Consensus 94 ~~GrrksWvvp~q-~llG~~mllLs~~v 120 (510)
T KOG3574|consen 94 RFGRRKSWVVPCQ-YLLGLFMLLLSYLV 120 (510)
T ss_pred hhccccceeeehH-HHHHHHHHHHhhCC
Confidence 9999987665432 23344444554444
No 295
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=69.50 E-value=28 Score=38.88 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=55.1
Q ss_pred HHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004750 54 IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 54 IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP 126 (732)
+..+.++++.+.+..++|-|.+++++....... +..=+-+.+..++.+-.+.|++.+..+..--+++++...
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344566667779999999999999887777653 223345788999999999999999988877777766653
No 296
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=68.95 E-value=51 Score=38.77 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhhhhhcccch
Q 004750 563 ITTLLMLPSIAVAMRLMDISGRR 585 (732)
Q Consensus 563 i~~~~~l~~~~i~g~l~d~~grr 585 (732)
.+.+.+.++..+++++-..+|.+
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCC
Confidence 45566666666666666666543
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=65.11 E-value=2.5e+02 Score=32.00 Aligned_cols=95 Identities=18% Similarity=0.106 Sum_probs=62.0
Q ss_pred HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH----HHHHH-Hh----hhhHHH
Q 004750 28 AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI----GGLVM-LW----SPNVYV 98 (732)
Q Consensus 28 ~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aI----gslL~-a~----a~s~~l 98 (732)
++..+...+.- ...-+++++.+.+.....+|+..+-++.|.--.-+.+.+-+++..+ ..+++ .| .++-+.
T Consensus 29 al~tLatyLlG-~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~V 107 (508)
T COG4262 29 ALGTLATYLLG-GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLV 107 (508)
T ss_pred HHHHHHHHhcC-CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHH
Confidence 44455665543 1567899999999999999998887777643322222222222211 11111 22 356678
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHh
Q 004750 99 LLLARLLDGFGIGLAVTLVPIYISE 123 (732)
Q Consensus 99 LiI~R~l~G~g~G~~~~~~~alIaE 123 (732)
+.+.-++.|.-.|.-.|..+.++..
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHH
Confidence 8888999999999999999888876
No 298
>PRK10263 DNA translocase FtsK; Provisional
Probab=64.94 E-value=65 Score=41.83 Aligned_cols=20 Identities=30% Similarity=0.212 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHhhhhhccc
Q 004750 564 TTLLMLPSIAVAMRLMDISG 583 (732)
Q Consensus 564 ~~~~~l~~~~i~g~l~d~~g 583 (732)
...++.+|..++..+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 44555666666666655556
No 299
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=63.53 E-value=84 Score=34.53 Aligned_cols=134 Identities=13% Similarity=0.057 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhhhCCh--HHHHHHHHHHHHHHHHHHh----hh---hHHHHHHHHHHHHHHHhhH
Q 004750 43 TIEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW----SP---NVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 43 s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrR--kvLLigllL~aIgslL~a~----a~---s~~lLiI~R~l~G~g~G~~ 113 (732)
.-.|.+.+.+.+..++|+-+..++..|-..| ..+.+..++.++...+... +| +...-+++-++.-.+.|..
T Consensus 282 iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlf 361 (454)
T KOG4332|consen 282 IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLF 361 (454)
T ss_pred CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhc
Confidence 3468888999999999988888887765544 3333433333333333222 12 2223345556666788899
Q ss_pred hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004750 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 114 ~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
+|..+.+=.++.|.+.|...+.++-+-...=..++ ...........+-|.+|.++....++..
T Consensus 362 wPSimkmRsqyIPEearstimNfFRvPLnifvClv--Lynlh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 362 WPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV--LYNLHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred chHHHHHHHhhCCHHHHhhhhhheechhhHhhhhh--heecccccCccccchhhhhhHHHHHHHH
Confidence 99999999999999999887776543332211111 0000011123466788888777655543
No 300
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=59.84 E-value=53 Score=38.66 Aligned_cols=31 Identities=23% Similarity=0.079 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHhhH
Q 004750 562 GITTLLMLPSIAVAMRLMDISGRRTLLLSTI 592 (732)
Q Consensus 562 ~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~ 592 (732)
..+.+=.+-+.++=.....|+||||..++-+
T Consensus 47 ~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 47 YPFSLKLLWAPIVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred chhHHHHhhhhhhhhhcccccCCcchhhhHH
Confidence 3445545555556666677899998877643
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.64 E-value=27 Score=34.65 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=50.6
Q ss_pred hhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccc--hhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhH
Q 004750 577 RLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSV--VHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGIC 654 (732)
Q Consensus 577 ~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 654 (732)
.++||+-||-.+.++++.. +++..+.++++...... ...++. ++.-+.+|+.+.-.+.|.+.+-...++..|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~-lG~~~f~~~y~l~~~~~~dvP~~~~---~~~S~~~Fg~gllGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTA-LGVAVFVVFYYLKSRQIVDVPPWAV---LLVSLVFFGLGLLGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHhccccccCchHH---HHHHHHHHHHHHHhhhhhhcccccCCCCCCCc
Confidence 4577888887777666654 44445555444433221 222222 22233344444445555555666677878999
Q ss_pred HHHHHHHHHHHHHH
Q 004750 655 IAICALVFWIGDII 668 (732)
Q Consensus 655 ~gi~~~~~~ig~~i 668 (732)
.|+-.+-.+++.+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99888877776544
No 302
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=58.09 E-value=4 Score=44.22 Aligned_cols=105 Identities=20% Similarity=0.179 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH---HHH----------HhhhhHHHHHHHHHHHHHHHhhH
Q 004750 47 LIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG---LVM----------LWSPNVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 47 ll~Sl~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgs---lL~----------a~a~s~~lLiI~R~l~G~g~G~~ 113 (732)
....+|.++-.+|..+.++.-=+-.+++.+.+..++-.+.. ++| .+.++-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877764211113333333322222211 112 11235577788899999999999
Q ss_pred hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004750 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 114 ~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~ 151 (732)
.+..+.+..+..++++|..+..+..++..+|..+|...
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp -HHHH---------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888544
No 303
>PHA03239 envelope glycoprotein M; Provisional
Probab=52.25 E-value=1.3e+02 Score=34.73 Aligned_cols=26 Identities=31% Similarity=0.332 Sum_probs=15.4
Q ss_pred CCCCcCCCCCCCCCcCCccccccccc
Q 004750 344 EYPSDAAGGDSDDNLQSPLISRQTTS 369 (732)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (732)
.+++++..-+.+||.+-+..+||.|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (429)
T PHA03239 398 ARPLDAYADDPRDNIPFERRSREGDA 423 (429)
T ss_pred CCCcccccCCccccCchhhccccCcc
Confidence 34555556666777666666665543
No 304
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=48.74 E-value=1.6e+02 Score=32.93 Aligned_cols=14 Identities=29% Similarity=0.181 Sum_probs=7.5
Q ss_pred hhhHHHHHHHHHHH
Q 004750 507 VKRALMVGVGIQIL 520 (732)
Q Consensus 507 ~~~~~~~~~~~~~~ 520 (732)
+.+..++++++...
T Consensus 131 y~~~~~~gv~i~i~ 144 (334)
T PF06027_consen 131 YSWFHILGVLICIA 144 (334)
T ss_pred hhHHHHHHHHHHHh
Confidence 45555566655443
No 305
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=47.39 E-value=6.2 Score=42.50 Aligned_cols=12 Identities=17% Similarity=0.548 Sum_probs=0.0
Q ss_pred HHHHHhccCCCC
Q 004750 698 IFVFIKVPETKG 709 (732)
Q Consensus 698 ~~~~~~~~et~~ 709 (732)
+++++++.+++.
T Consensus 179 iLIWlY~H~~~~ 190 (381)
T PF05297_consen 179 ILIWLYVHDQRH 190 (381)
T ss_dssp ------------
T ss_pred HHHHHHhcCCCC
Confidence 455666666664
No 306
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=45.66 E-value=65 Score=35.94 Aligned_cols=140 Identities=15% Similarity=0.231 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCC-hHHHH-----HH
Q 004750 7 VAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLI-----VS 79 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~-I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrfGr-RkvLL-----ig 79 (732)
..+=++..++...+-++.....+-. =...+.++ ..+|.=|....+.+|-.++. -+-++=+ +.... .-
T Consensus 252 ~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls-~~sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~v 325 (409)
T KOG3880|consen 252 YMVPLALVYFAEYFINQGLAELLLFPCSHGFSLS-KDSQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFV 325 (409)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhEEeccccCCccc-hhhcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHH
Confidence 4445566667777666665543311 12333332 23456677777776643332 1111111 11111 12
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004750 80 SVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 80 llL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~ 152 (732)
.+++.+.-.+..+.|+++..++.-+.-|+-.|..++-..--+.+-.++++|-.+++.....-++|..++.++.
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 2233334444556899999999999999999999998888888888889999999999999999999885443
No 307
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.11 E-value=43 Score=31.42 Aligned_cols=34 Identities=21% Similarity=0.267 Sum_probs=29.0
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 004750 647 PTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV 680 (732)
Q Consensus 647 p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~ 680 (732)
.++.++.+.++-...-.+++++.....||+.+.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456788888888888999999999999999986
No 308
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=40.54 E-value=2.9e+02 Score=29.86 Aligned_cols=56 Identities=20% Similarity=0.250 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 004750 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (732)
Q Consensus 99 LiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l 157 (732)
.-..|.+.|+-.-. +...++++.-.||++ .....+-....++|..++..+..+..+
T Consensus 22 ~~~lr~~~g~~~vl-f~PGy~l~~~lfp~~--~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFVL-FLPGYALVAALFPRK--HDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHHH-HhccHHHHHHHccCc--CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888876633 366778888899844 334556666777777777656555544
No 309
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=39.53 E-value=6.3e+02 Score=31.19 Aligned_cols=25 Identities=28% Similarity=0.262 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcc
Q 004750 558 LLISGITTLLMLPSIAVAMRLMDIS 582 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~ 582 (732)
.+.+.+..+.++.+.++...++|++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4445566777888888999999986
No 310
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.50 E-value=1.1e+02 Score=28.74 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHH
Q 004750 48 IVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIG 86 (732)
Q Consensus 48 l~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIg 86 (732)
-.+.=+++..+.....||+.||| |.+++.++..++.+.+
T Consensus 47 klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 34445566666667778888886 5666655554444433
No 311
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=36.03 E-value=1e+02 Score=34.92 Aligned_cols=96 Identities=19% Similarity=0.192 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhhCChH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 004750 44 IEGLIVAMSLIGATCITTCSGAIADWLGRRP--MLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI 121 (732)
Q Consensus 44 ~~gll~Sl~~IG~~Ig~~~~g~LsDrfGrRk--vLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alI 121 (732)
--|..-++..+..+++.+..|.+.-.+.|.. .+.++.+..+...+++..+.++|...++-.+.+.-.....++...-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 4466667777788999999999987777663 34445555555666677788888888888888887778888888888
Q ss_pred HhcCCcchhhhhhhHHHH
Q 004750 122 SETAPPEIRGLLNTLPQF 139 (732)
Q Consensus 122 aE~fP~k~RG~~~~~~~~ 139 (732)
++-...+.-|+..|+..+
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 888888888888887543
No 312
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=35.25 E-value=4.2e+02 Score=30.12 Aligned_cols=36 Identities=8% Similarity=0.167 Sum_probs=17.5
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004750 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 91 a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP 126 (732)
++++|+.....--.+..+..=...++.+-++.|.+=
T Consensus 229 ~~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L 264 (374)
T PF01528_consen 229 AIGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVL 264 (374)
T ss_pred HHhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666544443344444433444555555666553
No 313
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=34.71 E-value=6.6e+02 Score=27.65 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=9.1
Q ss_pred HHHHHHHhHHHhhhhhC
Q 004750 55 GATCITTCSGAIADWLG 71 (732)
Q Consensus 55 G~~Ig~~~~g~LsDrfG 71 (732)
...+.....|++..|+|
T Consensus 7 ~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 7 LPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 33444455566666554
No 314
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=34.40 E-value=4.5e+02 Score=28.93 Aligned_cols=24 Identities=21% Similarity=0.157 Sum_probs=13.4
Q ss_pred ccchhHHHhhHHHHHHHHHHHHHH
Q 004750 582 SGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 582 ~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
+|.++.=+.+..+.++.+++..++
T Consensus 84 fGy~R~eiLaa~~nav~Li~~s~~ 107 (296)
T COG1230 84 FGYKRLEILAAFLNALLLIVVSLL 107 (296)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHH
Confidence 455665555555555555555444
No 315
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=32.06 E-value=4.1e+02 Score=28.38 Aligned_cols=107 Identities=14% Similarity=0.277 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH--HHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 004750 80 SVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY--ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (732)
Q Consensus 80 llL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~al--IaE~fP~k~RG~~~~~~~~~~~~G~~ig~l~~l~~~l 157 (732)
.+.+.+|.+++..++....-.++.-..|+..|...+....+ +....| +|.....+...++++|..+-....-....
T Consensus 14 ~~~~v~Gi~Lf~~A~~LS~s~~FyY~sg~~lGv~~s~li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~~~nl~~ 91 (249)
T PF10225_consen 14 VAQFVLGIVLFFLAPSLSRSVLFYYSSGISLGVLASLLILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQLWENLQS 91 (249)
T ss_pred HHHHHHHHHHHHHhHHhccChhHHHhhhHHHHHHHHHHHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHHHHHHHH
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004750 158 MTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 158 ~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+-..-|..+++...+.+++...+...+-|..
T Consensus 92 il~~~~~~v~~yv~~~G~vsf~vcy~~gp~~ 122 (249)
T PF10225_consen 92 ILEEYRIYVLGYVLVVGLVSFAVCYRYGPPV 122 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCCCc
No 316
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=32.01 E-value=5.5e+02 Score=25.95 Aligned_cols=63 Identities=17% Similarity=0.141 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhh---hhhCChHHHHHHHHHHHHHHHHHHh----hhh----HHHHHHHHHHHHHH
Q 004750 47 LIVAMSLIGATCITTCSGAIA---DWLGRRPMLIVSSVLYFIGGLVMLW----SPN----VYVLLLARLLDGFG 109 (732)
Q Consensus 47 ll~Sl~~IG~~Ig~~~~g~Ls---DrfGrRkvLLigllL~aIgslL~a~----a~s----~~lLiI~R~l~G~g 109 (732)
+......+++.+|..+++.+. .+..+|+.....+++.++..++..+ .++ +....+.-+.+|+=
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Q 123 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQ 123 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 333445556667777777772 3344445444444444433333332 233 44455555555553
No 317
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.14 E-value=2.4e+02 Score=31.19 Aligned_cols=12 Identities=17% Similarity=-0.050 Sum_probs=5.7
Q ss_pred HHHHHhhhhhcc
Q 004750 571 SIAVAMRLMDIS 582 (732)
Q Consensus 571 ~~~i~g~l~d~~ 582 (732)
..++.|++.-|.
T Consensus 11 ~ii~~G~~~~~~ 22 (385)
T PF03547_consen 11 LIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHh
Confidence 334445555544
No 318
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=31.00 E-value=3.1e+02 Score=32.12 Aligned_cols=15 Identities=7% Similarity=0.149 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHhCCC
Q 004750 25 IAGAVLYIKREFHLE 39 (732)
Q Consensus 25 ~~~~~~~I~~~lgl~ 39 (732)
+.|.+..|.+.++++
T Consensus 79 FVPSL~vItEkL~iS 93 (588)
T KOG1307|consen 79 FVPSLDVITEKLGIS 93 (588)
T ss_pred ccccHHHHHHHhcCc
Confidence 456677888889983
No 319
>COG4769 Predicted membrane protein [Function unknown]
Probab=28.08 E-value=1.5e+02 Score=30.02 Aligned_cols=55 Identities=11% Similarity=0.039 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhh
Q 004750 52 SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGL 112 (732)
Q Consensus 52 ~~IG~~Ig~~~~g~LsDrfGrRkvLLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~ 112 (732)
+.+..++.+...-++..++|+|.+-+++. +..-++++|+.++++++++.|-..-+
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgi------S~mGaF~hNl~QLivas~Lv~~~~v~ 136 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGI------SVMGAFTHNLGQLIVASFLVFTTSVM 136 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeeh------hhHHHHHHhHHHHHHHHHHHhcchHH
Confidence 34444555566667788899887644442 23345688999999999998754433
No 320
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=26.54 E-value=5.3e+02 Score=24.02 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhhhhh-cccchhHHHhhHHH
Q 004750 566 LLMLPSIAVAMRLMD-ISGRRTLLLSTIPI 594 (732)
Q Consensus 566 ~~~l~~~~i~g~l~d-~~grr~~~~~~~~~ 594 (732)
+..+++.+++|+++- |.++|.++......
T Consensus 45 ~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 45 IIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 334445555555554 45666665444433
No 321
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=24.88 E-value=1.1e+03 Score=26.96 Aligned_cols=97 Identities=8% Similarity=0.031 Sum_probs=45.6
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCChHHHHHHHHHHHHHHHHHHhh---------
Q 004750 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRPMLIVSSVLYFIGGLVMLWS--------- 93 (732)
Q Consensus 27 ~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsD----rfGrRkvLLigllL~aIgslL~a~a--------- 93 (732)
..+|.+.+++.- .-+.-.++.....++.... ++.-.+-. +...-+++.+-+.+..+++++.++-
T Consensus 32 v~lp~lv~elpe--~wslpsyl~vvVqla~lgp-Li~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V~g 108 (439)
T KOG4255|consen 32 VELPLLVKELPE--GWSLPSYLSVVVQLANLGP-LIVTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPVFG 108 (439)
T ss_pred eehhHHHhhcCc--ccccchHHHHHHHHHcchh-HHHHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhhhc
Confidence 346888888764 3334444444444433222 22211111 1122344445555556666666542
Q ss_pred -hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004750 94 -PNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 94 -~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP 126 (732)
..-+.++..-|...+......+....++++.-|
T Consensus 109 ~~hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp 142 (439)
T KOG4255|consen 109 ALHSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPP 142 (439)
T ss_pred CcchHHHHHHHHHHHHHHhhccchhhhhhhhCCh
Confidence 122444444454555555555555566666555
No 322
>KOG1619 consensus Cytochrome b [Energy production and conversion]
Probab=24.74 E-value=8.9e+02 Score=25.99 Aligned_cols=43 Identities=26% Similarity=0.410 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhhccc--------chhhHHHHHHHHHHHHHHhhcccc
Q 004750 594 ILITSLVVLVLSSVIKMGS--------VVHASISTVSVVLYFCCFVMGFGP 636 (732)
Q Consensus 594 ~~~i~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 636 (732)
+.++.+.++++...++.++ +-|+|+.+..+++|..=+..|+..
T Consensus 97 ~~Alvl~i~gl~avf~~hn~~~i~NfySLHSWlGl~~v~ly~~Q~v~GF~t 147 (245)
T KOG1619|consen 97 IIALVLAIIGLCAVFDSHNLVGIANFYSLHSWLGLCVVILYSLQWVFGFFT 147 (245)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCccceeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444433 346788888888887766666544
No 323
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=24.16 E-value=1.2e+03 Score=27.16 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=14.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHh--hhhHHHHH
Q 004750 72 RRPMLIVSSVLYFIGGLVMLW--SPNVYVLL 100 (732)
Q Consensus 72 rRkvLLigllL~aIgslL~a~--a~s~~lLi 100 (732)
+|+.+.++.++.++=.+++.. ..++.+++
T Consensus 377 ~k~~~~~~~~L~~LY~~Ly~lLq~EdyALL~ 407 (430)
T PF06123_consen 377 WKRGLIFAGLLAALYGFLYVLLQSEDYALLM 407 (430)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 455555665555555555443 23444443
No 324
>PRK11715 inner membrane protein; Provisional
Probab=23.65 E-value=1.2e+03 Score=27.12 Aligned_cols=77 Identities=14% Similarity=0.091 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHh--h
Q 004750 17 LQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLW--S 93 (732)
Q Consensus 17 ~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDrf-GrRkvLLigllL~aIgslL~a~--a 93 (732)
+.|.....+-.++..+.++.+. ..+++.+.... ..+++.+++--. ++|+.+.++..+.++=.+++.. +
T Consensus 336 LVGlAl~lFYLLLLSlSEHigF-----~~AYliAa~a~----v~li~~Y~~~vl~~~k~g~~~~~~L~~LYg~Ly~lLq~ 406 (436)
T PRK11715 336 LVGLALVLFYLLLLSLSEHIGF-----TLAYLIAALAC----VLLIGFYLSAVLRSWKRGLLFAAALAALYGVLYGLLQS 406 (436)
T ss_pred HHHHHHHHHHHHHHHHHhhhch-----HHHHHHHHHHH----HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555666666665 22222222222 222233333333 3556666666666665555554 3
Q ss_pred hhHHHHHHH
Q 004750 94 PNVYVLLLA 102 (732)
Q Consensus 94 ~s~~lLiI~ 102 (732)
.++.+++-.
T Consensus 407 EDyALL~GS 415 (436)
T PRK11715 407 EDYALLLGS 415 (436)
T ss_pred hHHHHHHHH
Confidence 345444433
No 325
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=22.39 E-value=1.1e+03 Score=26.08 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh---hCChHHHHHH
Q 004750 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW---LGRRPMLIVS 79 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~~lgl~~s~s~~gll~Sl~~IG~~Ig~~~~g~LsDr---fGrRkvLLig 79 (732)
|+.+..+++.+++++.-...+.+..-+..+.+..++ .....+++.++..+. ++..-.++ ||.||.=+++
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hm--l~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLa 93 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHM--LSDALALLLALIAIK------LARRPATKRFTFGYKRLEILA 93 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHH--HHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHH
Confidence 455555566666666655555555556677777776 434444444333222 22333333 6777765555
Q ss_pred HHHHHHH
Q 004750 80 SVLYFIG 86 (732)
Q Consensus 80 llL~aIg 86 (732)
.++.++.
T Consensus 94 a~~nav~ 100 (296)
T COG1230 94 AFLNALL 100 (296)
T ss_pred HHHHHHH
Confidence 5544443
No 326
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=22.38 E-value=1.1e+03 Score=26.45 Aligned_cols=21 Identities=33% Similarity=0.254 Sum_probs=13.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHH
Q 004750 587 LLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~ 607 (732)
.++.++..+++++++-.+...
T Consensus 80 ~ilf~tiGLiiGLlia~l~~~ 100 (356)
T COG4956 80 TILFGTIGLIIGLLIAVLLSS 100 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 466677777777766555433
No 327
>PHA03242 envelope glycoprotein M; Provisional
Probab=22.25 E-value=6.1e+02 Score=29.39 Aligned_cols=34 Identities=12% Similarity=0.017 Sum_probs=14.8
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC
Q 004750 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (732)
Q Consensus 92 ~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~f 125 (732)
+++|+.....--.+..+..=...++.+-++.|.+
T Consensus 244 ~gNsF~v~~~~~v~~ai~~F~vL~ii~liv~E~v 277 (428)
T PHA03242 244 AANNFHLSLPGTLVCLTAVFALLVVLLLVVVEGV 277 (428)
T ss_pred HhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555543333333333333333444455555554
No 328
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.60 E-value=1.4e+02 Score=27.67 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=25.7
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004750 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+..+|+.+|++...++++.+.+.+.+.||+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4568999999988888888888888898873
No 329
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=21.26 E-value=4.4e+02 Score=25.82 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChH
Q 004750 49 VAMSLIGATCITTCSGAIADWLGRRP 74 (732)
Q Consensus 49 ~Sl~~IG~~Ig~~~~g~LsDrfGrRk 74 (732)
+.-|.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34567788888899999999988764
No 330
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=21.10 E-value=9.3e+02 Score=26.17 Aligned_cols=103 Identities=11% Similarity=0.059 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhh-hhCChHHHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHHHHHhhHh
Q 004750 45 EGLIVAMSLIGATCITTCSGAIAD-WLGRRPMLI----VSSVLYFIGGLVMLW-S----PNVYVLLLARLLDGFGIGLAV 114 (732)
Q Consensus 45 ~gll~Sl~~IG~~Ig~~~~g~LsD-rfGrRkvLL----igllL~aIgslL~a~-a----~s~~lLiI~R~l~G~g~G~~~ 114 (732)
......++..|..+|....|.... .+-||+.+. .+.++.++..++... . .++..+.+.-|+.|++.=+..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 344555666666667666677664 344565444 234444444443211 1 135667777888887765554
Q ss_pred HHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004750 115 TLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 115 ~~~~alIaE~fP~k~RG~~~~~~~~~~~~G~~ig 148 (732)
++....--| ++...+-+..-+.+..+++|.++-
T Consensus 223 ~ViL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHE-YKGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhh-hcCCCcceehhHHHHHHHHHHHHH
Confidence 444333333 333344444555566666666665
No 331
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.72 E-value=6.3e+02 Score=33.44 Aligned_cols=20 Identities=10% Similarity=-0.019 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhHHHhhhhhC
Q 004750 52 SLIGATCITTCSGAIADWLG 71 (732)
Q Consensus 52 ~~IG~~Ig~~~~g~LsDrfG 71 (732)
.+++..+|..+...+.--||
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34444555555555555555
No 332
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=20.67 E-value=1.4e+03 Score=26.63 Aligned_cols=66 Identities=20% Similarity=0.220 Sum_probs=30.1
Q ss_pred HhhhhhCChHH-----HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhh
Q 004750 65 AIADWLGRRPM-----LIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLN 134 (732)
Q Consensus 65 ~LsDrfGrRkv-----LLigllL~aIgslL~a~a~s~~lLiI~R~l~G~g~G~~~~~~~alIaE~fP~k~RG~~~ 134 (732)
++.+.+.++++ +++|+.+...-.++.+++-... |. ....++.+.+......|+.-....++||..+
T Consensus 313 flfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~-F~---~AYliAa~a~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 313 FLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIG-FN---LAYLIAALACIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhc-hH---HHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 45555555544 3344444444444444443221 11 1122333344445555666666666666444
No 333
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.64 E-value=33 Score=37.20 Aligned_cols=18 Identities=11% Similarity=0.604 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004750 685 VFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 685 ~f~~~~~~~~i~~~~~~~ 702 (732)
.||++..+.++.|+++.=
T Consensus 170 L~WL~LFlaiLIWlY~H~ 187 (381)
T PF05297_consen 170 LYWLLLFLAILIWLYVHD 187 (381)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 566666677777877653
No 334
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=20.46 E-value=6.9e+02 Score=26.73 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhH
Q 004750 77 IVSSVLYFIGGLVMLW-SPNVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 77 LigllL~aIgslL~a~-a~s~~lLiI~R~l~G~g~G~~ 113 (732)
+++++++++++++..+ .++.+.+.+.-++.+|+.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 3444445444444443 445556666666666666555
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.12 E-value=4.5e+02 Score=24.39 Aligned_cols=39 Identities=18% Similarity=0.010 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004750 566 LLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 566 ~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
+..++|.+++-||=.+++-...+...++++.+...+...
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n~ 92 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLNA 92 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 333445555556655788766555544444444444433
No 336
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=20.05 E-value=1.1e+03 Score=25.50 Aligned_cols=34 Identities=24% Similarity=0.186 Sum_probs=24.2
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004750 678 NSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 678 ~~~g~~~~f~~~~~~~~i~~~~~~~~~~et~~~~ 711 (732)
+..|....|.+-=...+++.+.-.++++|.|+++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 3567777777666666777777777889988754
Done!