Query 004752
Match_columns 732
No_of_seqs 329 out of 1902
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 12:19:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004752.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004752hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02638 cellulose synthase A 100.0 2E-176 5E-181 1526.7 55.4 711 3-731 253-1061(1079)
2 PLN02436 cellulose synthase A 100.0 6E-176 1E-180 1517.1 55.0 709 4-731 270-1076(1094)
3 PLN02400 cellulose synthase 100.0 3E-176 7E-181 1525.9 53.0 713 1-731 257-1066(1085)
4 PLN02195 cellulose synthase A 100.0 7E-176 2E-180 1512.0 55.1 710 3-731 156-957 (977)
5 PLN02189 cellulose synthase 100.0 2E-175 3E-180 1515.9 55.6 710 3-731 235-1022(1040)
6 PLN02893 Cellulose synthase-li 100.0 1E-172 2E-177 1468.8 58.5 701 2-732 9-734 (734)
7 PLN02915 cellulose synthase A 100.0 2E-173 5E-178 1498.4 53.7 711 4-731 192-1026(1044)
8 PLN02190 cellulose synthase-li 100.0 3E-173 8E-178 1464.0 51.7 698 2-727 6-755 (756)
9 PLN02248 cellulose synthase-li 100.0 6E-173 1E-177 1496.2 52.0 716 4-731 267-1120(1135)
10 PF03552 Cellulose_synt: Cellu 100.0 1E-161 3E-166 1366.4 37.7 622 97-731 1-708 (720)
11 TIGR03030 CelA cellulose synth 100.0 5.5E-73 1.2E-77 669.6 54.3 508 20-710 56-574 (713)
12 PRK11498 bcsA cellulose syntha 100.0 3.6E-73 7.7E-78 668.9 50.7 488 21-709 187-686 (852)
13 PRK05454 glucosyltransferase M 100.0 3.5E-39 7.6E-44 376.5 52.4 360 19-541 40-420 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 6.6E-36 1.4E-40 337.2 40.1 231 91-497 71-306 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 1.1E-36 2.4E-41 319.0 24.1 241 97-493 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 1E-35 2.2E-40 332.9 30.7 257 70-497 29-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 1.3E-33 2.9E-38 315.6 39.7 230 91-497 50-285 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 3.6E-34 7.8E-39 322.6 34.9 282 91-549 45-341 (439)
19 PRK14716 bacteriophage N4 adso 100.0 1.9E-30 4E-35 294.1 39.0 262 91-520 62-353 (504)
20 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.6E-30 3.6E-35 266.7 21.8 227 95-491 1-232 (232)
21 cd06421 CESA_CelA_like CESA_Ce 100.0 3.1E-30 6.6E-35 263.1 22.7 230 95-495 1-234 (234)
22 PRK11234 nfrB bacteriophage N4 100.0 7.4E-28 1.6E-32 283.0 36.1 240 87-496 56-334 (727)
23 cd06427 CESA_like_2 CESA_like_ 100.0 2.7E-29 5.8E-34 259.9 19.6 230 95-496 1-235 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 3E-28 6.4E-33 249.9 21.7 229 98-496 1-233 (236)
25 TIGR03472 HpnI hopanoid biosyn 100.0 2.2E-26 4.9E-31 254.1 28.7 228 92-492 38-273 (373)
26 PF13641 Glyco_tranf_2_3: Glyc 100.0 5E-29 1.1E-33 254.0 5.8 224 95-490 1-228 (228)
27 cd04190 Chitin_synth_C C-termi 99.9 8.3E-27 1.8E-31 242.6 14.7 172 271-493 64-243 (244)
28 cd02520 Glucosylceramide_synth 99.9 1.6E-25 3.4E-30 224.5 17.0 191 95-490 1-195 (196)
29 PRK15489 nfrB bacteriophage N4 99.9 4.7E-23 1E-27 239.9 36.9 236 91-495 67-341 (703)
30 cd04192 GT_2_like_e Subfamily 99.9 1.5E-24 3.2E-29 219.9 20.6 221 99-490 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 4.7E-24 1E-28 218.2 19.6 229 96-493 1-234 (235)
32 cd06439 CESA_like_1 CESA_like_ 99.9 1.7E-23 3.6E-28 216.7 23.0 228 88-494 22-251 (251)
33 TIGR03469 HonB hopene-associat 99.9 5.9E-22 1.3E-26 219.8 34.6 230 91-489 36-280 (384)
34 COG2943 MdoH Membrane glycosyl 99.9 5.5E-20 1.2E-24 200.2 44.6 343 19-524 63-423 (736)
35 cd02525 Succinoglycan_BP_ExoA 99.9 1E-20 2.2E-25 194.3 18.2 224 96-496 1-232 (249)
36 cd06438 EpsO_like EpsO protein 99.8 1.8E-19 4E-24 178.5 13.0 162 99-373 1-168 (183)
37 cd06436 GlcNAc-1-P_transferase 99.8 5E-19 1.1E-23 177.1 16.2 165 99-373 1-176 (191)
38 PF13632 Glyco_trans_2_3: Glyc 99.7 1.1E-17 2.3E-22 167.0 14.2 137 287-491 1-143 (193)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 3.7E-17 8.1E-22 163.1 16.4 193 95-464 1-195 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 1.3E-16 2.8E-21 159.2 15.5 190 98-464 1-195 (201)
41 cd06433 GT_2_WfgS_like WfgS an 99.7 1.1E-15 2.4E-20 150.9 15.7 186 98-464 1-188 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.2E-15 2.6E-20 163.3 15.5 110 98-312 1-110 (299)
43 PLN02726 dolichyl-phosphate be 99.7 9.4E-15 2E-19 151.7 21.3 171 93-373 7-179 (243)
44 cd04196 GT_2_like_d Subfamily 99.6 3.2E-15 7E-20 149.8 15.9 193 98-464 1-197 (214)
45 cd04186 GT_2_like_c Subfamily 99.6 8.3E-15 1.8E-19 140.3 15.9 157 99-464 1-159 (166)
46 cd02522 GT_2_like_a GT_2_like_ 99.6 1.4E-14 2.9E-19 146.7 17.4 178 97-461 1-178 (221)
47 cd06420 GT2_Chondriotin_Pol_N 99.6 1.7E-14 3.8E-19 141.4 17.6 171 99-464 1-174 (182)
48 cd06442 DPM1_like DPM1_like re 99.6 2.6E-14 5.5E-19 144.9 18.6 107 99-314 1-107 (224)
49 cd06913 beta3GnTL1_like Beta 1 99.6 3.8E-14 8.2E-19 144.2 19.8 111 99-312 1-111 (219)
50 PF13506 Glyco_transf_21: Glyc 99.6 1.9E-14 4.2E-19 142.9 14.1 153 265-489 15-175 (175)
51 cd04185 GT_2_like_b Subfamily 99.6 1.4E-13 3E-18 137.8 17.8 165 99-464 1-167 (202)
52 PRK10073 putative glycosyl tra 99.5 4.2E-14 9E-19 154.0 14.6 109 94-313 5-113 (328)
53 cd04188 DPG_synthase DPG_synth 99.5 3.1E-13 6.7E-18 136.7 17.6 107 99-313 1-110 (211)
54 cd02526 GT2_RfbF_like RfbF is 99.5 5E-14 1.1E-18 144.2 11.2 141 251-464 48-198 (237)
55 PF03142 Chitin_synth_2: Chiti 99.5 6.3E-12 1.4E-16 142.8 29.2 164 283-496 200-379 (527)
56 cd06423 CESA_like CESA_like is 99.5 3.6E-14 7.7E-19 135.1 9.1 161 99-373 1-167 (180)
57 PRK10063 putative glycosyl tra 99.5 9.4E-13 2E-17 137.9 16.9 48 95-146 1-49 (248)
58 PRK10018 putative glycosyl tra 99.5 2.3E-12 4.9E-17 137.3 20.0 109 93-311 3-111 (279)
59 PF00535 Glycos_transf_2: Glyc 99.5 3.9E-14 8.4E-19 134.8 4.9 164 98-373 1-166 (169)
60 PTZ00260 dolichyl-phosphate be 99.4 4.9E-11 1.1E-15 130.2 26.0 118 91-312 66-189 (333)
61 cd04179 DPM_DPG-synthase_like 99.4 2.1E-12 4.5E-17 126.8 13.7 164 99-374 1-165 (185)
62 TIGR01556 rhamnosyltran L-rham 99.3 1.7E-11 3.7E-16 129.9 13.2 145 250-464 45-195 (281)
63 PRK13915 putative glucosyl-3-p 99.3 5E-11 1.1E-15 128.7 15.2 124 91-324 27-152 (306)
64 cd04187 DPM1_like_bac Bacteria 99.3 7.7E-11 1.7E-15 116.0 15.0 107 250-374 55-161 (181)
65 PRK10714 undecaprenyl phosphat 99.2 1.5E-09 3.4E-14 118.1 24.4 111 94-311 5-116 (325)
66 cd00761 Glyco_tranf_GTA_type G 99.2 3.3E-10 7.1E-15 105.1 14.8 113 99-325 1-114 (156)
67 PF10111 Glyco_tranf_2_2: Glyc 99.2 6.7E-10 1.5E-14 118.4 17.7 134 266-464 74-216 (281)
68 COG1216 Predicted glycosyltran 99.1 1.1E-09 2.5E-14 117.9 17.6 198 94-464 2-214 (305)
69 KOG2571 Chitin synthase/hyalur 99.1 7.2E-10 1.6E-14 130.3 14.5 166 266-490 424-596 (862)
70 COG0463 WcaA Glycosyltransfera 98.9 2.2E-08 4.7E-13 95.7 11.9 47 94-146 2-48 (291)
71 cd02511 Beta4Glucosyltransfera 98.8 2.8E-08 6.1E-13 102.4 12.7 44 265-313 56-99 (229)
72 KOG2547 Ceramide glucosyltrans 98.6 1.1E-07 2.5E-12 101.6 7.8 153 265-489 155-314 (431)
73 KOG2978 Dolichol-phosphate man 98.1 2.3E-05 5E-10 77.1 11.7 105 250-373 63-174 (238)
74 KOG2977 Glycosyltransferase [G 98.0 3.4E-05 7.3E-10 80.6 10.6 43 265-311 142-186 (323)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.8 0.00019 4E-09 78.4 13.3 43 97-143 2-44 (334)
76 KOG3737 Predicted polypeptide 96.2 0.017 3.7E-07 62.9 8.6 49 91-142 151-199 (603)
77 PF02364 Glucan_synthase: 1,3- 96.2 0.051 1.1E-06 65.1 13.4 192 257-518 263-482 (817)
78 KOG3738 Predicted polypeptide 96.0 0.016 3.6E-07 63.3 7.4 50 92-144 121-170 (559)
79 PF13704 Glyco_tranf_2_4: Glyc 95.4 0.043 9.4E-07 48.6 6.7 35 107-146 1-35 (97)
80 KOG3736 Polypeptide N-acetylga 95.4 0.012 2.5E-07 68.4 3.7 113 91-310 138-251 (578)
81 PF13712 Glyco_tranf_2_5: Glyc 93.0 0.29 6.4E-06 50.5 7.5 45 266-314 40-85 (217)
82 PF03071 GNT-I: GNT-I family; 91.9 0.63 1.4E-05 52.6 8.8 48 92-144 90-138 (434)
83 PF03452 Anp1: Anp1; InterPro 88.6 3.3 7.3E-05 44.1 10.4 54 92-149 22-77 (269)
84 COG4092 Predicted glycosyltran 87.8 6.9 0.00015 41.4 11.7 80 249-331 61-141 (346)
85 PF09488 Osmo_MPGsynth: Mannos 86.2 4 8.7E-05 44.9 9.4 41 265-308 141-181 (381)
86 PRK14503 mannosyl-3-phosphogly 85.7 3.3 7.2E-05 45.5 8.5 43 265-310 142-184 (393)
87 TIGR02460 osmo_MPGsynth mannos 85.1 3.7 8.1E-05 44.9 8.5 43 265-310 141-183 (381)
88 cd00899 b4GalT Beta-4-Galactos 80.5 12 0.00027 38.7 9.9 53 443-495 138-200 (219)
89 PRK14502 bifunctional mannosyl 76.0 11 0.00023 45.4 8.9 43 265-310 146-188 (694)
90 PF01644 Chitin_synth_1: Chiti 75.6 24 0.00052 34.9 9.9 37 107-143 2-52 (163)
91 KOG0916 1,3-beta-glucan syntha 75.2 33 0.00071 44.0 12.9 71 441-516 1173-1244(1679)
92 PF05679 CHGN: Chondroitin N-a 58.3 1E+02 0.0022 36.1 12.2 48 251-306 315-362 (499)
93 PF13896 Glyco_transf_49: Glyc 58.2 13 0.00028 40.7 4.6 45 273-322 120-164 (317)
94 PRK09382 ispDF bifunctional 2- 50.8 39 0.00085 38.0 7.0 40 268-311 83-122 (378)
95 PF02709 Glyco_transf_7C: N-te 49.6 21 0.00045 30.8 3.6 22 443-464 46-67 (78)
96 COG4097 Predicted ferric reduc 45.9 1E+02 0.0022 34.6 8.8 68 93-179 342-409 (438)
97 PF02434 Fringe: Fringe-like; 45.7 46 0.00099 35.2 6.2 30 283-314 85-114 (252)
98 PF11316 Rhamno_transf: Putati 41.5 3.9E+02 0.0084 28.0 12.2 55 249-311 84-140 (234)
99 TIGR03584 PseF pseudaminic aci 40.8 2.4E+02 0.0051 29.0 10.5 59 266-324 76-134 (222)
100 KOG1413 N-acetylglucosaminyltr 39.6 1.8E+02 0.0038 32.5 9.3 45 94-143 66-111 (411)
101 PF06638 Strabismus: Strabismu 31.5 2.2E+02 0.0048 33.1 8.9 44 686-729 138-181 (505)
102 PF04724 Glyco_transf_17: Glyc 30.7 90 0.002 34.8 5.7 36 269-306 164-199 (356)
103 cd04182 GT_2_like_f GT_2_like_ 29.9 1.5E+02 0.0032 28.6 6.6 45 265-311 73-117 (186)
104 cd02540 GT2_GlmU_N_bac N-termi 29.6 1.9E+02 0.0041 29.1 7.6 53 252-312 64-117 (229)
105 cd02503 MobA MobA catalyzes th 27.2 2.2E+02 0.0047 27.6 7.3 42 265-310 68-109 (181)
106 PRK02726 molybdopterin-guanine 26.9 2.8E+02 0.006 27.9 8.2 42 266-311 78-119 (200)
107 KOG4179 Lysyl hydrolase/glycos 25.1 2.7E+02 0.0058 31.7 7.9 36 268-308 98-133 (568)
108 PLN03153 hypothetical protein; 24.5 3.6E+02 0.0077 31.7 9.1 30 283-314 209-238 (537)
109 TIGR02665 molyb_mobA molybdopt 24.4 1.5E+02 0.0032 29.0 5.5 43 265-311 72-114 (186)
110 TIGR03310 matur_ygfJ molybdenu 23.3 2.1E+02 0.0045 27.8 6.3 43 266-311 74-116 (188)
111 KOG3814 Signaling protein van 21.5 2.2E+02 0.0047 32.0 6.3 34 695-730 210-244 (531)
112 PF06306 CgtA: Beta-1,4-N-acet 20.5 2.5E+02 0.0055 30.9 6.5 35 265-303 159-193 (347)
113 PF01762 Galactosyl_T: Galacto 20.1 1.7E+02 0.0037 29.1 5.1 37 270-310 69-105 (195)
No 1
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=2.3e-176 Score=1526.74 Aligned_cols=711 Identities=34% Similarity=0.647 Sum_probs=658.6
Q ss_pred CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccc
Q 004752 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (732)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (732)
..+|||++++.+++. .+||+++++++++++++|+||+++.. ..+.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R 328 (1079)
T PLN02638 253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR 328 (1079)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 477899999988873 67999999999999999999999854 3568999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHh
Q 004752 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (732)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (732)
.+++|+|.+ ++++|.||||||||||++|||.+++|||+|+|++|||.||++|||+|||++.+|+++|.||++|
T Consensus 329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 408 (1079)
T PLN02638 329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF 408 (1079)
T ss_pred ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998863 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhh-------hcCC---------C
Q 004752 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE---------Y 217 (732)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~-------~~~~---------~ 217 (732)
||+||||||||+|||||||+||+.+ +..+++..++|++||+.||++|||||+|||.+. ++|+ +
T Consensus 409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g 488 (1079)
T PLN02638 409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG 488 (1079)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence 9999999999999999999999998 556777889999999999999999999999874 2222 4
Q ss_pred CCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004752 218 GNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 297 (732)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~ 297 (732)
+.++|||+|+||+++++++ .|.++.++|+|+||+|||||+++||+||||||+++|+||+|||||||+|+||||++
T Consensus 489 ~~~~dHp~IiqVll~~~~~-----~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi 563 (1079)
T PLN02638 489 NNTRDHPGMIQVFLGHSGG-----LDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI 563 (1079)
T ss_pred CCCCCCHHHHHHHhcCCCc-----cccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence 5889999999988765432 24567789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cc
Q 004752 298 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DF 376 (732)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (732)
|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|
T Consensus 564 Nns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p 643 (1079)
T PLN02638 564 NNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP 643 (1079)
T ss_pred CchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 34
Q ss_pred cch---------------------------------------------------------------------hhhhccCC
Q 004752 377 THT---------------------------------------------------------------------ELKDTFGK 387 (732)
Q Consensus 377 ~~~---------------------------------------------------------------------~~~~~~~~ 387 (732)
+.. .+.++||+
T Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~ 723 (1079)
T PLN02638 644 PIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQ 723 (1079)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccc
Confidence 210 13367999
Q ss_pred chhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCC
Q 004752 388 SNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRP 467 (732)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~ 467 (732)
|.++++|+..+.+..+ ....+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus 724 S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~ 801 (1079)
T PLN02638 724 SAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRP 801 (1079)
T ss_pred cHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCch
Confidence 9999999987775433 33457899999999999999999999999999999999999999999999999999987788
Q ss_pred eeEeccCCChHHHhhhhhccccCcccccccccCccccC-CCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCC
Q 004752 468 QFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGI 546 (732)
Q Consensus 468 ~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~ 546 (732)
++.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|+ +.++|.++|+++|++||++|+
T Consensus 802 AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~ 880 (1079)
T PLN02638 802 AFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGK 880 (1079)
T ss_pred HhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999987 3789999999999999999 999999999999999999999
Q ss_pred ccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCc
Q 004752 547 SLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVL 626 (732)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~ 626 (732)
+++|+++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..
T Consensus 881 ~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~ 960 (1079)
T PLN02638 881 FIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKAS 960 (1079)
T ss_pred ccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred chhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 004752 627 DKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKD 704 (732)
Q Consensus 627 ~~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~ 704 (732)
+++.. .+++|+|+ |+++++|.++++++|++|+++|+++++.++ .|+.+++++++|+|+|++++||++|||+||
T Consensus 961 d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~- 1035 (1079)
T PLN02638 961 DEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ- 1035 (1079)
T ss_pred ccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 65432 25899999 999999999999999999999999998755 689999999999999999999999999997
Q ss_pred CCCCchHHHHHHHHHHHHHHHHhhhhc
Q 004752 705 KGRISPSAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 705 ~~~ip~~~~~~s~~l~~~~~~~~~~~~ 731 (732)
+|+|+++++||++|+++|+++|..|+
T Consensus 1036 -~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638 1036 -NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred -CCCCeeehHHHHHHHHHHHHHHheec
Confidence 79999999999999999999998764
No 2
>PLN02436 cellulose synthase A
Probab=100.00 E-value=6.3e-176 Score=1517.15 Aligned_cols=709 Identities=34% Similarity=0.638 Sum_probs=655.7
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeecccc
Q 004752 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (732)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (732)
.+|||++++.+++. ++||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 270 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~ 345 (1094)
T PLN02436 270 RQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPIERE 345 (1094)
T ss_pred CCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccce
Confidence 77899999988874 469999999999999999999998543 3689999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhh
Q 004752 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (732)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (732)
+++|+|.+ ++++|.||||||||||++|||.+++|||+|+|++|||.|||+|||+|||++.+|+++|.||++||
T Consensus 346 t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 425 (1094)
T PLN02436 346 TYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFA 425 (1094)
T ss_pred eCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHH
Confidence 99998853 24699999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhc-------CC---------CC
Q 004752 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (732)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-------~~---------~~ 218 (732)
|+||||||||+|||||||+||+.+ +..+++..++|++||+.||++|||||+|||.+.++ ++ ++
T Consensus 426 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~ 505 (1094)
T PLN02436 426 RKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGN 505 (1094)
T ss_pred HhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCC
Confidence 999999999999999999999998 55677778899999999999999999999987642 11 56
Q ss_pred CCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004752 219 NSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (732)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~ 298 (732)
+++|||+||||+++++++ .|.++.++|+++||+|||||+++||+||||||+++|+||+|||+|||+++||||++|
T Consensus 506 ~~~dHp~IIqVll~~~~~-----~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN 580 (1094)
T PLN02436 506 NVRDHPGMIQVFLGHSGV-----RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN 580 (1094)
T ss_pred CCCCCccceEEEecCCCC-----cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence 889999999988866432 355778899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-ccc
Q 004752 299 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 377 (732)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 377 (732)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp 660 (1094)
T PLN02436 581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP 660 (1094)
T ss_pred chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 433
Q ss_pred c---------------------------------------------------------------------hhhhhccCCc
Q 004752 378 H---------------------------------------------------------------------TELKDTFGKS 388 (732)
Q Consensus 378 ~---------------------------------------------------------------------~~~~~~~~~~ 388 (732)
. +.+.++||+|
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S 740 (1094)
T PLN02436 661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS 740 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence 0 0133679999
Q ss_pred hhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCe
Q 004752 389 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ 468 (732)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~ 468 (732)
.++++|+..+.+. .+.+..+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus 741 ~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A 818 (1094)
T PLN02436 741 PVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA 818 (1094)
T ss_pred HHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence 9999999887743 23344668899999999999999999999999999999999999999999999999999887889
Q ss_pred eEeccCCChHHHhhhhhccccCcccccccccCccccCC-CCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCc
Q 004752 469 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP-SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS 547 (732)
Q Consensus 469 ~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~-~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~ 547 (732)
+.|+||+|+.+++.||+|||+|++||+++|+||+++|. ++|++.||++|+++++|+ +.++|.++|+++|++||++|++
T Consensus 819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~ 897 (1094)
T PLN02436 819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF 897 (1094)
T ss_pred hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999763 589999999999999999 9999999999999999999999
Q ss_pred cccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004752 548 LYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD 627 (732)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~ 627 (732)
++|.++.+|+++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|..+
T Consensus 898 i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d 977 (1094)
T PLN02436 898 IVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAAD 977 (1094)
T ss_pred ecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 004752 628 KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDK 705 (732)
Q Consensus 628 ~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~ 705 (732)
++. .+++|+|+ |+++++|+++++++|++|+++|+.+++.+| .|+.+++++++|+|++++++||++|||+| +
T Consensus 978 ~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr--~ 1050 (1094)
T PLN02436 978 DGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK--Q 1050 (1094)
T ss_pred ccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc--C
Confidence 432 23688999 999999999999999999999999998755 68999999999999999999999999944 5
Q ss_pred CCCchHHHHHHHHHHHHHHHHhhhhc
Q 004752 706 GRISPSAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 706 ~~ip~~~~~~s~~l~~~~~~~~~~~~ 731 (732)
+|+|++|++||++|+++|+++|..++
T Consensus 1051 ~r~P~~v~v~s~lla~~~~l~~v~~~ 1076 (1094)
T PLN02436 1051 DRMPTIILVWSILLASILTLLWVRVN 1076 (1094)
T ss_pred CCCCeeehHHHHHHHHHHHHHHeeec
Confidence 69999999999999999999998764
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=3.4e-176 Score=1525.89 Aligned_cols=713 Identities=34% Similarity=0.642 Sum_probs=659.0
Q ss_pred CCC-CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheee
Q 004752 1 MDS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRP 78 (732)
Q Consensus 1 ~~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p 78 (732)
||+ .+|||++++.++++ .+||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|
T Consensus 257 ~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~P 332 (1085)
T PLN02400 257 ADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVK----DAYGLWLTSVICEIWFALSWLLDQFPKWYP 332 (1085)
T ss_pred cccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCccccc
Confidence 344 68899999988874 579999999999999999999998543 368999999999999999999999999999
Q ss_pred ccccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHH
Q 004752 79 VSRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREA 151 (732)
Q Consensus 79 ~~r~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea 151 (732)
++|.+++|+|++ ++++|.||||||||||++|||.+++|||+|+|++|||.||++|||+|||++.+|+++|.||
T Consensus 333 v~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Ea 412 (1085)
T PLN02400 333 INRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSET 412 (1085)
T ss_pred ccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHH
Confidence 999999998863 2469999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhh-------hcCC-------
Q 004752 152 CRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE------- 216 (732)
Q Consensus 152 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~-------~~~~------- 216 (732)
++|||+||||||||+|||||||+||+.+ +..+++..|+|++||+.||++|||||+|||.+. ++|+
T Consensus 413 a~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~ 492 (1085)
T PLN02400 413 AEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTP 492 (1085)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCcc
Confidence 9999999999999999999999999998 556677889999999999999999999999874 2332
Q ss_pred --CCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCC
Q 004752 217 --YGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 294 (732)
Q Consensus 217 --~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD 294 (732)
+++++|||+||||+++++++ .|.++.++|+|+||+|||||+++||+||||||+++|+||+|||+|||+|+|||
T Consensus 493 W~g~~~~dHp~iIqVll~~~~~-----~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCD 567 (1085)
T PLN02400 493 WPGNNPRDHPGMIQVFLGHSGG-----LDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCD 567 (1085)
T ss_pred CCCCCCCCCchhhhhhhcCCCC-----cccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccc
Confidence 56889999999988876532 24567789999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc
Q 004752 295 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 374 (732)
Q Consensus 295 ~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~ 374 (732)
|++|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+||||
T Consensus 568 mY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG 647 (1085)
T PLN02400 568 HYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYG 647 (1085)
T ss_pred cccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -cccc-------------------------------------------------------------------hhhhhccC
Q 004752 375 -DFTH-------------------------------------------------------------------TELKDTFG 386 (732)
Q Consensus 375 -~~~~-------------------------------------------------------------------~~~~~~~~ 386 (732)
.|+. +++.++||
T Consensus 648 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG 727 (1085)
T PLN02400 648 YDPVLTEEDLEPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFG 727 (1085)
T ss_pred CCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhcc
Confidence 3410 01345899
Q ss_pred CchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCC
Q 004752 387 KSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFR 466 (732)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~ 466 (732)
+|.++++|+..+.+. .+....+++++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|++
T Consensus 728 ~S~~fi~S~~~~~~~--~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r 805 (1085)
T PLN02400 728 QSPVFIAATFMEQGG--IPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPR 805 (1085)
T ss_pred ccHHHHHHHHHHhcC--CCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCc
Confidence 999999999855332 233456789999999999999999999999999999999999999999999999999999878
Q ss_pred CeeEeccCCChHHHhhhhhccccCcccccccccCccccC-CCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcC
Q 004752 467 PQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNG 545 (732)
Q Consensus 467 ~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g 545 (732)
+++.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| +.++|.++|+++|++||++|
T Consensus 806 ~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~-~~slp~liY~llP~l~LltG 884 (1085)
T PLN02400 806 PAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYP-ITSIPLLAYCVLPAFCLITN 884 (1085)
T ss_pred HhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999987 4789999999999999999 99999999999999999999
Q ss_pred CccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCC
Q 004752 546 ISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKV 625 (732)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~ 625 (732)
++++|.++++++++|+++++++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|.
T Consensus 885 ~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~ 964 (1085)
T PLN02400 885 KFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKA 964 (1085)
T ss_pred CccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004752 626 LDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRK 703 (732)
Q Consensus 626 ~~~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~ 703 (732)
.+++.. .+++|+|+ |+++++|+++++++|++|+++|+++++.++ .|+.+++++++|+|++++++||++|||+|+
T Consensus 965 ~d~~~~---~~ely~f~-~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~~~~~~wvvv~l~Pf~kgL~gR~ 1040 (1085)
T PLN02400 965 SDEDGD---FAELYVFK-WTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQ 1040 (1085)
T ss_pred cccccc---ccceeeec-ccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 865431 25899999 999999999999999999999999998755 689999999999999999999999999887
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 004752 704 DKGRISPSAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 704 ~~~~ip~~~~~~s~~l~~~~~~~~~~~~ 731 (732)
+|+|++|++||++|+++|+++|..|+
T Consensus 1041 --~r~P~~v~~~s~lla~~~~l~~v~~~ 1066 (1085)
T PLN02400 1041 --NRTPTIVIVWSILLASIFSLLWVRID 1066 (1085)
T ss_pred --CCCceeHHHHHHHHHHHHHHHheecc
Confidence 89999999999999999999998764
No 4
>PLN02195 cellulose synthase A
Probab=100.00 E-value=7.4e-176 Score=1511.99 Aligned_cols=710 Identities=35% Similarity=0.642 Sum_probs=656.6
Q ss_pred CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccc
Q 004752 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (732)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (732)
..+|||++++.+++. ++||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 156 ~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R 231 (977)
T PLN02195 156 AYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVD----SAFGLWLTSVICEIWFAFSWVLDQFPKWSPINR 231 (977)
T ss_pred ccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccc----cchHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 368899999988874 469999999999999999999988543 456999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHh
Q 004752 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (732)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (732)
.+++|+|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.||++|||+|||++.+|+++|.||++|
T Consensus 232 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 311 (977)
T PLN02195 232 ETYIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEF 311 (977)
T ss_pred eECHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2569999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhc-C------C---------C
Q 004752 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-G------E---------Y 217 (732)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-~------~---------~ 217 (732)
||+||||||||+||||+||+||+.+ +..+++..|+|++||+.||++|||||+|||.+.++ + + +
T Consensus 312 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g 391 (977)
T PLN02195 312 ARKWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPG 391 (977)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCC
Confidence 9999999999999999999999998 55557778999999999999999999999987543 1 1 5
Q ss_pred CCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004752 218 GNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 297 (732)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~ 297 (732)
+.++|||+||||+++++++ .|.++.++|+++||+||||||++||+||||||+++|+|++|||||||+++||||++
T Consensus 392 ~~~~dHp~IIqVll~~~~~-----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~ 466 (977)
T PLN02195 392 NNTRDHPGMIQVFLGETGA-----RDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYV 466 (977)
T ss_pred CCCCCCcchhhhhccCCCC-----cccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCcccc
Confidence 6889999999999877543 35567789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cc
Q 004752 298 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DF 376 (732)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (732)
|||++++++||||+||+.++++||||+||+|+|.+++|+|++++++||+++++|+||+|||+||||||+|||+||+| .|
T Consensus 467 n~s~~lr~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p 546 (977)
T PLN02195 467 NNSKAVREAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGP 546 (977)
T ss_pred CcHHHHHHHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999998 43
Q ss_pred cc--------------------------------------------------------------hhhhhccCCchhhhhh
Q 004752 377 TH--------------------------------------------------------------TELKDTFGKSNVLINS 394 (732)
Q Consensus 377 ~~--------------------------------------------------------------~~~~~~~~~~~~~~~~ 394 (732)
+. .++.++||+|.++++|
T Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S 626 (977)
T PLN02195 547 PSLPRLPKSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIES 626 (977)
T ss_pred cccccccccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHH
Confidence 21 0234578999999998
Q ss_pred hhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccC
Q 004752 395 LHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST 474 (732)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP 474 (732)
+..+.++.+. ...+.+++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||
T Consensus 627 ~~~~~~~~~~--~~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP 704 (977)
T PLN02195 627 TLMENGGVPE--SANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAP 704 (977)
T ss_pred HHHHhcCCCC--CCCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCC
Confidence 8777654332 33567899999999999999999999999999999999999999999999999999987789999999
Q ss_pred CChHHHhhhhhccccCcccccccccCccccCC--CCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCcccccc
Q 004752 475 TNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEV 552 (732)
Q Consensus 475 ~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~ 552 (732)
+|+.+++.||+|||+|++|++++|+||+++|. ++|++.||++|+++++|+ +.++|.++|+++|++||++|++++|.+
T Consensus 705 ~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~-~~slp~liY~~lP~l~Ll~G~~i~P~v 783 (977)
T PLN02195 705 INLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYP-FTSLPLIAYCTLPAICLLTGKFIIPTL 783 (977)
T ss_pred CCHHHHHHHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCeecccc
Confidence 99999999999999999999999999999763 689999999999999999 999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhh
Q 004752 553 SSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVK 632 (732)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~ 632 (732)
+.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|..++++
T Consensus 784 s~~~~~~f~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd~~-- 861 (977)
T PLN02195 784 SNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADDTE-- 861 (977)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccccc--
Confidence 988989899999999999999999999999999999999999999999999999999999999999999999887532
Q ss_pred hhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCch
Q 004752 633 RYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISP 710 (732)
Q Consensus 633 ~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~ 710 (732)
.+++|+|+ |+++++|.++++++|++|+++|+++++.+| .|+.+++++++|+|++++++||++|||+|| +|+|+
T Consensus 862 --~~~~Y~f~-~S~l~iP~ttl~ilNlvaiv~g~~~~i~~~~~~~g~l~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~ 936 (977)
T PLN02195 862 --FGELYMVK-WTTLLIPPTSLLIINLVGVVAGFSDALNKGYEAWGPLFGKVFFAFWVILHLYPFLKGLMGRQ--NRTPT 936 (977)
T ss_pred --hhcceecc-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhHHHHHHHHHHHHHHHHHHHHHHhccC--CCCCe
Confidence 23788999 999999999999999999999999998755 688999999999999999999999999997 79999
Q ss_pred HHHHHHHHHHHHHHHHhhhhc
Q 004752 711 SAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 711 ~~~~~s~~l~~~~~~~~~~~~ 731 (732)
++++||++|+++|+++|..|+
T Consensus 937 ~v~v~s~ll~~~~~l~~v~~~ 957 (977)
T PLN02195 937 IVVLWSVLLASVFSLVWVKIN 957 (977)
T ss_pred eehHHHHHHHHHHHHHHeecc
Confidence 999999999999999998764
No 5
>PLN02189 cellulose synthase
Probab=100.00 E-value=1.6e-175 Score=1515.89 Aligned_cols=710 Identities=34% Similarity=0.647 Sum_probs=656.4
Q ss_pred CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccc
Q 004752 3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (732)
Q Consensus 3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (732)
..+|||++++.+++. ++||+++++++++++++|+||+++..+ ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus 235 ~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~----~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 235 ARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVH----DAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCc----cchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 478899999988874 469999999999999999999998542 458999999999999999999999999999999
Q ss_pred cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHh
Q 004752 82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF 154 (732)
Q Consensus 82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f 154 (732)
.+++|+|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.||++|||+|||++.+|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 999998853 2349999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhh-------hcCC---------C
Q 004752 155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV-------EDGE---------Y 217 (732)
Q Consensus 155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~-------~~~~---------~ 217 (732)
||+||||||||+|||||||+||+.+ +..+++..++|++||+.||++|||||+|||.+. ++++ +
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 9999999999999999999999998 556777888999999999999999999999874 1222 4
Q ss_pred CCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004752 218 GNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYC 297 (732)
Q Consensus 218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~ 297 (732)
+.++|||+|+||+++++++ .|.++.++|+++||+||||||++||+||||||+++|+||+|||||||+|+||||++
T Consensus 471 ~~~~dHp~IiQVll~~~~~-----~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~ 545 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGG-----HDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYI 545 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCC-----ccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCcccc
Confidence 5789999999988765432 24467789999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cc
Q 004752 298 NDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DF 376 (732)
Q Consensus 298 ~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~ 376 (732)
|||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|
T Consensus 546 Nns~alr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p 625 (1040)
T PLN02189 546 NNSKAVREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDP 625 (1040)
T ss_pred CchHHHHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 44
Q ss_pred cc------------------------------------------------hhhhhccCCchhhhhhhhhhhcccCCCCCC
Q 004752 377 TH------------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGEN 408 (732)
Q Consensus 377 ~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (732)
.. .++.++||+|.++++|+..+.... +...
T Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~--~~~~ 703 (1040)
T PLN02189 626 PKGPKRPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGV--PPSS 703 (1040)
T ss_pred ccccccccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCC--CCCC
Confidence 20 123457999999999988775332 3334
Q ss_pred chhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccc
Q 004752 409 FSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWG 488 (732)
Q Consensus 409 ~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa 488 (732)
.+.+++++|++|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|+||+|+.+++.||+|||
T Consensus 704 ~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA 783 (1040)
T PLN02189 704 SPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWA 783 (1040)
T ss_pred CcHHHHHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHh
Confidence 56789999999999999999999999999999999999999999999999999998789999999999999999999999
Q ss_pred cCcccccccccCccccCC--CCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHH
Q 004752 489 SGLTDVGLSRFCPLLYGP--SRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFIS 566 (732)
Q Consensus 489 ~G~~qi~~~~~~pl~~~~--~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~ 566 (732)
+|++||+++|+||+++|. ++|++.||++|+++++|+ +.++|.++|+++|++||++|.+++|.++.+++++|++++++
T Consensus 784 ~G~lqI~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~-~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~ 862 (1040)
T PLN02189 784 LGSVEIFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYP-FTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMS 862 (1040)
T ss_pred hhhHHHhhccCCccccccCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHH
Confidence 999999999999999863 579999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccch
Q 004752 567 AICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSM 646 (732)
Q Consensus 567 ~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~ 646 (732)
+++++++|++|+|.++++|||+||||+|.++++++++++++++|+|++++++|.||+|..+++.. +++|+|+ |++
T Consensus 863 ~~~~~llE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~~~----~~ly~f~-~s~ 937 (1040)
T PLN02189 863 IFATGILELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDDEF----GELYAFK-WTT 937 (1040)
T ss_pred HHHHHHHHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccccc----ccceeec-cee
Confidence 99999999999999999999999999999999999999999999999999999999998865532 4899999 999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHH
Q 004752 647 FLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFL 724 (732)
Q Consensus 647 l~~p~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~ 724 (732)
+++|+++++++|++|+++|+++++.++ .|+.+++++++|+|+|++++||++|||+|| +|+|+++++||++|+++|+
T Consensus 938 l~iP~ttl~i~Nlvaiv~g~~~~~~~~~~~~~~~~~~~~~~~wvv~~~~Pf~kgl~gR~--~r~P~~v~v~s~ll~~~~~ 1015 (1040)
T PLN02189 938 LLIPPTTLLIINIVGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVIWSVLLASIFS 1015 (1040)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--CCCCeeehHHHHHHHHHHH
Confidence 999999999999999999999998755 588999999999999999999999999997 7999999999999999999
Q ss_pred HHhhhhc
Q 004752 725 FFGSIIL 731 (732)
Q Consensus 725 ~~~~~~~ 731 (732)
++|..++
T Consensus 1016 l~~v~~~ 1022 (1040)
T PLN02189 1016 LLWVRID 1022 (1040)
T ss_pred HHHheec
Confidence 9998764
No 6
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=9.8e-173 Score=1468.85 Aligned_cols=701 Identities=40% Similarity=0.749 Sum_probs=645.9
Q ss_pred CCCCCceeeeecCchhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccc
Q 004752 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (732)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (732)
...+|||||++.+++ .+||+++++++++++++++||+++..... ..|.|+++++||+||+|+|+++|+.||+|++|
T Consensus 9 ~~~~pL~~~~~~~~~-~~~R~~~~~~~~~i~~ll~~r~~~~~~~~---~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~r 84 (734)
T PLN02893 9 TGAPPLHTCHPMRRT-IANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLAFMWATTQAFRMCPVHR 84 (734)
T ss_pred CCCCCceeeeecCCc-hHHHHHHHHHHHHHHHHHHHHhccccccc---chHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 357899999998776 57999999999999999999999876532 36899999999999999999999999999999
Q ss_pred cCCCCCCCC---CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcc
Q 004752 82 TVFPERLPE---DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWW 158 (732)
Q Consensus 82 ~~~~~~l~~---~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w 158 (732)
.+++|+|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.||++|||+|||++++|+++|.||++|||+|
T Consensus 85 ~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~W 164 (734)
T PLN02893 85 RVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHW 164 (734)
T ss_pred ccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhh
Confidence 999999874 45799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcCccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCC--------------------CC
Q 004752 159 LPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGE--------------------YG 218 (732)
Q Consensus 159 ~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~--------------------~~ 218 (732)
+||||||+|||||||+||+.+. +++.+||+.||++|||||+|||++.+++. ++
T Consensus 165 vPFCrk~~ie~R~P~~YF~~~~-------~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 165 LPFCKKNKIVERCPEAYFSSNS-------HSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred cccccccCCCcCCHHHHhccCC-------CccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999999872 35678999999999999999999853222 45
Q ss_pred CCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004752 219 NSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (732)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~ 298 (732)
+++|||+||||+++++++ .|.++.++|+++|++|||||+++||+||||||+++|+|++|||||||+|+||||++|
T Consensus 238 ~~~dH~~ivqV~l~~~~~-----~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n 312 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKD-----KDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSN 312 (734)
T ss_pred CCCCCCceeeeeccCCCc-----cchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCC
Confidence 799999999988876543 355667899999999999999999999999999999999999999999999999998
Q ss_pred chHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccc
Q 004752 299 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTH 378 (732)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~ 378 (732)
||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+||++||||||+|||+||+|.+..
T Consensus 313 ~p~~l~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~ 392 (734)
T PLN02893 313 DPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSS 392 (734)
T ss_pred chhHHHHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999984321
Q ss_pred --hhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCC
Q 004752 379 --TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKG 456 (732)
Q Consensus 379 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~G 456 (732)
.+....++++. .......+++++++|++|+||.||++|.||+++||.|+|+|||++||++||++|
T Consensus 393 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~G 459 (734)
T PLN02893 393 LILPEIPELNPDH-------------LVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEG 459 (734)
T ss_pred ccchhhhhccccc-------------ccccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcC
Confidence 00011111110 111233467899999999999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCCeeEeccCCChHHHhhhhhccccCcccccccccCccccCCCCCChhhHHHHHHHhHhhHHhHHHHHHHHH
Q 004752 457 WTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLAT 536 (732)
Q Consensus 457 wrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~ 536 (732)
|||+||+|+++++.|++|+|+.++++||+|||+|++|++++|+||+++|.++|++.||++|++.++|+ ++++|.++|++
T Consensus 460 WrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~~~~~~-~~slp~liY~~ 538 (734)
T PLN02893 460 WKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAFWP-IWSIPITIYAF 538 (734)
T ss_pred CcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhcccCCCHHHHHHHHHHHHHH-HhHHHHHHHHH
Confidence 99999998778999999999999999999999999999999999999877899999999999999999 99999999999
Q ss_pred HHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 004752 537 LPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRK 616 (732)
Q Consensus 537 ~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~ 616 (732)
+|++||++|++++|+++.+|++++++++++.++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++
T Consensus 539 ~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg~s~ 618 (734)
T PLN02893 539 LPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGIST 618 (734)
T ss_pred HHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhcccC
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred cceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHHH
Q 004752 617 ASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIV 696 (732)
Q Consensus 617 ~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~g~~~~~~~~~~~~~w~vv~l~p~~ 696 (732)
.+|+||+|+.++++.++|++|+|+|+.++|+++|+++++++|++|+++|+++++.++.++.+++++++|+|++++++||+
T Consensus 619 ~~F~VT~K~~~~~~~~~y~~~~f~f~~~spl~ip~ttl~llNl~a~v~Gi~~~~~~~~~~~~~~~~~~~~~~v~~~~P~~ 698 (734)
T PLN02893 619 FGFNVTSKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIY 698 (734)
T ss_pred CceeecCCCcccccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877889999999999779999999999999999999999999877778888999999999999999999
Q ss_pred HHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhcC
Q 004752 697 EGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM 732 (732)
Q Consensus 697 ~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~~~~~~ 732 (732)
+||++|||||+||+||++||++|++++|.+.+++.+
T Consensus 699 ~gl~~r~dkg~~P~~v~~~s~~l~~~~~~~~~~~~~ 734 (734)
T PLN02893 699 EAMVLRTDDGKLPVKITLISIVLAWALYLASSFAFK 734 (734)
T ss_pred HHHhccCCCCCCCccHHHHHHHHHHHHHHHHhhhcC
Confidence 999999999999999999999999999999988753
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=2.2e-173 Score=1498.36 Aligned_cols=711 Identities=34% Similarity=0.630 Sum_probs=653.1
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeecccc
Q 004752 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (732)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (732)
.+|||++++.+++. ++||+++++++++++++|.||+++ ++.++.|+|+++++||+||+|+|+|+|+.+|+|++|.
T Consensus 192 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~----~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~ 267 (1044)
T PLN02915 192 RQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILT----PAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRE 267 (1044)
T ss_pred CCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcC----cCCCchHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 68899999988874 469999999999999999999998 3345789999999999999999999999999999999
Q ss_pred CCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhh
Q 004752 83 VFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFA 155 (732)
Q Consensus 83 ~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa 155 (732)
+++|+|.+ ++++|.||||||||||++|||.+++|||+|+|++|||.|||+|||+|||++.+|+++|.||++||
T Consensus 268 t~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA 347 (1044)
T PLN02915 268 TYLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFA 347 (1044)
T ss_pred cCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHH
Confidence 99998863 23499999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhc-------CC---------CC
Q 004752 156 KWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-------GE---------YG 218 (732)
Q Consensus 156 ~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-------~~---------~~ 218 (732)
|+||||||||+|||||||+||+.+ +..+++..++|++||+.||++|||||+|||.+.++ |+ ++
T Consensus 348 k~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~ 427 (1044)
T PLN02915 348 RRWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGN 427 (1044)
T ss_pred HhhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCC
Confidence 999999999999999999999998 55667778999999999999999999999987543 21 44
Q ss_pred CCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004752 219 NSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 298 (732)
Q Consensus 219 ~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~ 298 (732)
..+|||+||||++++.++ .|.++.++|+|+||+|||||+++||+||||||+++|+||+|||+|||+|+||||++|
T Consensus 428 ~~~dHp~IIqVll~~~~~-----~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~N 502 (1044)
T PLN02915 428 NTRDHPGMIQVYLGSEGA-----LDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYIN 502 (1044)
T ss_pred CCCCCccceEEeecCCCC-----cccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccC
Confidence 568999999988865332 355677899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-ccc
Q 004752 299 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT 377 (732)
Q Consensus 299 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~ 377 (732)
||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus 503 ns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp 582 (1044)
T PLN02915 503 NSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPP 582 (1044)
T ss_pred cchhhHhhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 443
Q ss_pred c-------------------------------------------------------------------------------
Q 004752 378 H------------------------------------------------------------------------------- 378 (732)
Q Consensus 378 ~------------------------------------------------------------------------------- 378 (732)
.
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (1044)
T PLN02915 583 VSEKRPKMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEE 662 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1
Q ss_pred ----------------hhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCc
Q 004752 379 ----------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV 442 (732)
Q Consensus 379 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv 442 (732)
+.+.++||+|.++++|+..+.+. .+....+++++++|++|+||.||++|+||+++||.|+|+
T Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSv 740 (1044)
T PLN02915 663 GLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGG--LPEGTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSV 740 (1044)
T ss_pred ccccccchhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcC--CCCCCCcHHHHHHHHhccccCCCccCchhHhhCcccccc
Confidence 01334789999999988775432 233446678999999999999999999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCcccccccccCccccC-CCCCChhhHHHHHHHh
Q 004752 443 SEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELS 521 (732)
Q Consensus 443 tED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~ 521 (732)
|||+.||++||++||||+||+|+++++.|+||+|+.++++||+|||+|++||+++++||++++ .++|++.||++|+++.
T Consensus 741 TEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~ 820 (1044)
T PLN02915 741 TEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTI 820 (1044)
T ss_pred ccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHH
Confidence 999999999999999999998878899999999999999999999999999999999999975 3799999999999999
Q ss_pred HhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHH
Q 004752 522 FFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHF 601 (732)
Q Consensus 522 ~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l 601 (732)
+|+ +.++|.++|+++|++||++|++++|.++.....+|+++++++++++++|++|+|.++++|||+||+|+|.++++++
T Consensus 821 ~yp-~~slp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~L 899 (1044)
T PLN02915 821 VYP-FTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHL 899 (1044)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999 9999999999999999999999999877766667778889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhc--CCcchhH
Q 004752 602 YGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV--GNWDKLF 679 (732)
Q Consensus 602 ~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~--g~~~~~~ 679 (732)
++++++++++||+++++|+||+|+.+++.++. +++|+|+ |+++++|+++++++|++|+++|+++++.. +.++.++
T Consensus 900 favl~~iLKvLg~se~~F~VTsK~~d~~~d~~--~ely~F~-~S~l~iP~ttllllNlvalv~Gi~~~i~~~~~~~g~l~ 976 (1044)
T PLN02915 900 FAVFQGLLKVLGGVDTNFTVTSKAADDEADEF--GELYLFK-WTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLF 976 (1044)
T ss_pred HHHHHHHHHHhcccCCcceecCCccccchhhh--ccceeec-ceehHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 99999999999999999999999986554332 4899999 99999999999999999999999999864 4578899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 004752 680 PQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 680 ~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~~~~~ 731 (732)
+++++++|++++++||++||++|+ +|+|+++++||++|+++|+++|+.++
T Consensus 977 ~~l~~~~wvvv~lyPf~kgLmgR~--~r~P~~v~v~s~lla~~~~ll~v~~~ 1026 (1044)
T PLN02915 977 GKLFFAFWVIVHLYPFLKGLMGRQ--NRTPTIVVLWSILLASIFSLVWVRID 1026 (1044)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC--CCCCeeehHHHHHHHHHHHHHHheec
Confidence 999999999999999999999997 79999999999999999999998764
No 8
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=3.5e-173 Score=1463.96 Aligned_cols=698 Identities=33% Similarity=0.593 Sum_probs=638.3
Q ss_pred CCCCCceeeeecCchhHHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccc
Q 004752 2 DSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR 81 (732)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 81 (732)
.+++|||+|++.+++ ++|++.+++++++++|+.||+++.++. .+.|+.+++||+|++|+|+|+|+.+|+|++|
T Consensus 6 ~~~~pL~~~~~~~~~--~~r~~~~~vl~~~~~~l~~R~~~~~~~-----~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r 78 (756)
T PLN02190 6 SSLPPLCERISHKSY--FLRAVDLTILGLLFSLLLYRILHMSEN-----DTVWLVAFLCESCFSFVWLLITCIKWSPAEY 78 (756)
T ss_pred CCCCCceeeeeccch--hHHHHHHHHHHHHHHHHHHHHhCCCcc-----cHHHHHHHHHHHHHHHHHHHhccceeeecCC
Confidence 467899999998887 699999999999999999999998654 2478889999999999999999999999999
Q ss_pred cCCCCCCCC-CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchh
Q 004752 82 TVFPERLPE-DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLP 160 (732)
Q Consensus 82 ~~~~~~l~~-~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~p 160 (732)
.++|++|++ -+++|+||||||||||++|||.+|+|||+|+|++|||.||++|||+|||++++|+++|.||++|||+|+|
T Consensus 79 ~~~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvP 158 (756)
T PLN02190 79 KPYPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVP 158 (756)
T ss_pred CCCcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcc
Confidence 999999875 3469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhh-------cCC-----CCCCCCCcchhh
Q 004752 161 FCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE-----YGNSQNHSTIIE 228 (732)
Q Consensus 161 fc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~~~-----~~~~~~h~~i~~ 228 (732)
|||||+|||||||+||+.... ...+++|++||+.||++|||||+|||++.. +++ +++++|||+|||
T Consensus 159 FCrK~~IepRaPe~YF~~~~~--~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiq 236 (756)
T PLN02190 159 FCKKYNVRVRAPFRYFLNPPV--ATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVK 236 (756)
T ss_pred cccccCCCcCCHHHHhcCCCC--CCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceE
Confidence 999999999999999998532 224579999999999999999999999742 121 578999999999
Q ss_pred hhhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004752 229 QIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 308 (732)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~ 308 (732)
|+++++++ +.++.++|+++||+|||||+++||+||||||+++|+||+|||+|||+|+||||++|||++++++||
T Consensus 237 Vll~~~~~------~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmC 310 (756)
T PLN02190 237 VVWENKGG------VGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMC 310 (756)
T ss_pred EEecCCCC------ccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhh
Confidence 88766332 235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCC-CcEEEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cccc--------
Q 004752 309 FHLDPKIS-SSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH-------- 378 (732)
Q Consensus 309 ~f~D~~~~-~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~-------- 378 (732)
||+|++.+ +++||||+||+|+ |+|+|++++||++.++|.||+|||+|+||||+|||+|||| .|+.
T Consensus 311 f~ld~~~~~~~~~fVQfPQ~F~-----D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~ 385 (756)
T PLN02190 311 IFLQKSKNSNHCAFVQFPQEFY-----DSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLS 385 (756)
T ss_pred hhcCCCCCCCeeEEEeCchhhc-----cccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCccccccccccc
Confidence 99998755 4899999999998 7899999999999999999999999999999999999999 5542
Q ss_pred ----------hhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHH
Q 004752 379 ----------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFT 448 (732)
Q Consensus 379 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t 448 (732)
.+..++||+|.++++|+..+..+.. +.+..+++++++|++|+||.||++|+||+++||.|+|+|||+.|
T Consensus 386 ~~~~~~~~~~~~~~~~fg~s~~f~~s~~~~~~~~~-~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~T 464 (756)
T PLN02190 386 SVATREFLAEDSLAREFGNSKEMVKSVVDALQRKP-NPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNT 464 (756)
T ss_pred ccccccccchhhhhhhcCCcHHHHHHHHHHhccCC-CCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHH
Confidence 1245889999999999987664322 22334578999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCcccccccccCccccC-CCCCChhhHHHHHHHhHhhHHh
Q 004752 449 GFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLY 527 (732)
Q Consensus 449 ~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~ 527 (732)
|++||++||||+||+|+++++.|++|+++.+.++||+||++|++|++++|+||++++ .++|++.||++|++..+ + ++
T Consensus 465 Gl~mh~rGWrSvY~~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~-~~ 542 (756)
T PLN02190 465 SIGIHSRGWTSSYISPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-C-LR 542 (756)
T ss_pred HHHHHccCCceEecCCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-H-HH
Confidence 999999999999999888999999999999999999999999999999999999975 57999999999999877 7 99
Q ss_pred HHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHH
Q 004752 528 CLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDT 607 (732)
Q Consensus 528 ~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~ 607 (732)
++|+++|+++|++||++|.+++|+. +|+++++++++++++++++|++|+|+++++||||||||+|.++++|+++++++
T Consensus 543 sip~l~Y~~lP~l~Ll~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~ 620 (756)
T PLN02190 543 SIPELIYCLLPAYCLLHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDI 620 (756)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHH
Confidence 9999999999999999999999964 67888888888889999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcceeeccCCcc-------------hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhc--
Q 004752 608 ILKLLGLRKASFLPTNKVLD-------------KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAV-- 672 (732)
Q Consensus 608 l~~~l~~~~~~F~VT~K~~~-------------~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~r~~~~-- 672 (732)
++|+||+++++|+||+|..+ +++.++|++|+|+|+ +|++++|.++++++|++|+++|+++++..
T Consensus 621 ~lK~lg~s~~~F~vTsK~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~-~S~lfiP~tti~~~Nl~a~~~g~~~~~~~~~ 699 (756)
T PLN02190 621 ILKLLGISKTVFIVTKKTMPETKSGSGSGPSQGEDDGPNSDSGKFEFD-GSLYFLPGTFIVLVNLAALAGFLVGLQRSSY 699 (756)
T ss_pred HHHHhccccceEEEeeccccccccccccccccccccchhhhcceeEec-ceehHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999754 344678899999999 99999999999999999999999987642
Q ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHh
Q 004752 673 ---GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFG 727 (732)
Q Consensus 673 ---g~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~ 727 (732)
+.++. ++++++|+|+|++++||++||+ |||||+||+|++++|++|+++|++|.
T Consensus 700 s~~~~~~~-l~q~~~~~~vv~~~~P~~~gl~-~kdkg~iP~s~~~~s~~l~~~f~~~~ 755 (756)
T PLN02190 700 SHGGGGSG-LAEACGCILVVMLFLPFLKGLF-EKGKYGIPLSTLSKAAFLAVLFVVFS 755 (756)
T ss_pred ccCccccc-HHHHHHHHHHHHHHHHHHHHHh-cCCCCCCChhHHHHHHHHHHHHHhcc
Confidence 34554 4999999999999999999998 99999999999999999999999985
No 9
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=5.6e-173 Score=1496.20 Aligned_cols=716 Identities=31% Similarity=0.569 Sum_probs=647.5
Q ss_pred CCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeecccc
Q 004752 4 PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRT 82 (732)
Q Consensus 4 ~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~ 82 (732)
.+|||++++.+++. ++||+++++++++++++|+||+++ ++.++.|+|+++++||+||+|+|+|+|+.||+|++|.
T Consensus 267 ~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~----~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~ 342 (1135)
T PLN02248 267 WRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRN----PNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRA 342 (1135)
T ss_pred CCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcC----CCCcchHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 47799999988874 469999999999999999999998 3345799999999999999999999999999999999
Q ss_pred CCCCCCCC------------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHH
Q 004752 83 VFPERLPE------------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMRE 150 (732)
Q Consensus 83 ~~~~~l~~------------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~E 150 (732)
+++++|.+ ++++|.||||||||||++|||.++.|||+|+|+.|||.|||.|||+|||++.+|+|+|.|
T Consensus 343 t~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~E 422 (1135)
T PLN02248 343 TDLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAE 422 (1135)
T ss_pred cCHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHH
Confidence 99987753 236999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcchhhhhhcCccccCcccccccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhc---------------
Q 004752 151 ACRFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED--------------- 214 (732)
Q Consensus 151 a~~fa~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~--------------- 214 (732)
|++||++||||||||+||||+||+||+.+ +..+++..++|++||+.||++|||||+|||.+.+.
T Consensus 423 Aa~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~ 502 (1135)
T PLN02248 423 AASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIK 502 (1135)
T ss_pred HHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHH
Confidence 99999999999999999999999999988 55566778999999999999999999999987320
Q ss_pred ---------------------------CC-----------CCCCCCCcchhhhhhhcccCc---------chhhhhcccc
Q 004752 215 ---------------------------GE-----------YGNSQNHSTIIEQIIQETFGE---------SETIRQADLV 247 (732)
Q Consensus 215 ---------------------------~~-----------~~~~~~h~~i~~~~~~~~~~~---------~~~~~~~~~~ 247 (732)
|. +++++|||+||||++++++.+ +...++..+.
T Consensus 503 ~~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~ 582 (1135)
T PLN02248 503 AKKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDI 582 (1135)
T ss_pred hhhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCccccccccccccccc
Confidence 01 458899999999998764411 1111223455
Q ss_pred CcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcc
Q 004752 248 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 327 (732)
Q Consensus 248 ~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 327 (732)
++|+|+||+|||||+++||+||||||+++|+|++|||||||+|+||||++|||++++++||||+||+ ++++||||+||+
T Consensus 583 ~lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQr 661 (1135)
T PLN02248 583 RLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQR 661 (1135)
T ss_pred ccceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999997 899999999999
Q ss_pred cccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cccch---------------------------
Q 004752 328 FHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTHT--------------------------- 379 (732)
Q Consensus 328 f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~~--------------------------- 379 (732)
|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|++.
T Consensus 662 F~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 662 FEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred cCCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999 44321
Q ss_pred -------------hhhhccCCchhhhhhhhhhhcc-c----------------C-CCCCCchhhHHHhhccccccceecc
Q 004752 380 -------------ELKDTFGKSNVLINSLHQSYKQ-N----------------N-ANGENFSNVLQEETGVLASCSYEHQ 428 (732)
Q Consensus 380 -------------~~~~~~~~~~~~~~~~~~~~~~-~----------------~-~~~~~~~~~~~~~~~~v~~c~ye~~ 428 (732)
.+.++||+|..+++|+..+..+ . . .+....+.+++++|++|+||.||++
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence 1235899999999988665421 0 0 1233346688999999999999999
Q ss_pred ccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCcccccccccCccccCCCC
Q 004752 429 TKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSR 508 (732)
Q Consensus 429 t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~ 508 (732)
|+||+++||.|+|+|||+.||++||++||||+||+|+++++.|++|+|+.++++||+|||+|++||+++|+||++.+ ++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~-~~ 900 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS-RR 900 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC-CC
Confidence 99999999999999999999999999999999998778999999999999999999999999999999999999876 69
Q ss_pred CChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHH-HHHHHHHHHHHHHHHHhCCcchhhhh
Q 004752 509 MSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFS-FIFISAICKHLQEVISTGGSIYAWRN 587 (732)
Q Consensus 509 l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~~~~~ww~ 587 (732)
|++.||++|+++.+|+ +.++|.++|+++|++||++|++++|+. .+++++++ .++++++.++++|++|+|.++++|||
T Consensus 901 Lsl~QRL~Yl~~~lyp-f~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWr 978 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYP-FTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWR 978 (1135)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhh
Confidence 9999999999999999 999999999999999999999999986 45555554 44577789999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHH
Q 004752 588 EQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFI 667 (732)
Q Consensus 588 ~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~p~~~l~~l~l~al~~g~~ 667 (732)
+||||+|.++++++++++++++|+|++++++|+||+|+.+++..++| +++|+|+ |+++++|+++++++|++|+++|++
T Consensus 979 nQq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~~~-a~ly~f~-wS~L~iP~ttl~llNLvAivvGv~ 1056 (1135)
T PLN02248 979 NEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDDEF-ADLYIVK-WTSLMIPPITIMMVNLIAIAVGVS 1056 (1135)
T ss_pred hhheeeehhhHHHHHHHHHHHHHHhcCccccceeCCccccccccccc-chheecC-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987766677 5899999 999999999999999999999999
Q ss_pred HHhhc--CCcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhhc
Q 004752 668 RIIAV--GNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL 731 (732)
Q Consensus 668 r~~~~--g~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~~~~~ 731 (732)
|++.+ +.|+.+++++++++|++++++||++|||+| |+|+|++|++||++|+++++++|..+.
T Consensus 1057 R~i~g~~~~~~~l~g~l~~s~Wvv~~lyPf~kGL~gR--~gr~P~iv~v~s~ll~~~~sll~v~~~ 1120 (1135)
T PLN02248 1057 RTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGR--RGRTPTIVYVWSGLLSITISLLWVAIS 1120 (1135)
T ss_pred HHHhccCcchhhhHHHHHHHHHHHHHHHHHHHHHhcc--CCCCCeehHHHHHHHHHHHHHHheEec
Confidence 99864 346788999999999999999999999999 889999999999999999999998664
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=1.4e-161 Score=1366.44 Aligned_cols=622 Identities=44% Similarity=0.791 Sum_probs=582.4
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccc
Q 004752 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (732)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (732)
||||||||||++|||.++.|||+|+|++|||.|||+|||+|||++++|+++|.||++|||+||||||||+||||||++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC-CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhh-------cCC---------CCCCCCCcchhhhhhhcccCcch
Q 004752 177 SEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------YGNSQNHSTIIEQIIQETFGESE 239 (732)
Q Consensus 177 ~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~-------~~~---------~~~~~~h~~i~~~~~~~~~~~~~ 239 (732)
+.+ +..+++..++|++||+.||++|||||+|||.+.+ +++ +++++|||+||||+++++++
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~--- 157 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGG--- 157 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCC---
Confidence 998 7777888999999999999999999999998742 222 56899999999988876543
Q ss_pred hhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcE
Q 004752 240 TIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL 319 (732)
Q Consensus 240 ~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v 319 (732)
.|.++.++|+++||+|||||+++||+||||||+++|+|++|||||||+++||||++|||+.++++||||+||+.++++
T Consensus 158 --~~~~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~ 235 (720)
T PF03552_consen 158 --KDVDGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKI 235 (720)
T ss_pred --cccccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCee
Confidence 366788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCcccccCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc-cccc--------------------
Q 004752 320 AFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFTH-------------------- 378 (732)
Q Consensus 320 g~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~~-------------------- 378 (732)
||||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+||+| .|++
T Consensus 236 ~~vQfpq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k 315 (720)
T PF03552_consen 236 AFVQFPQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRK 315 (720)
T ss_pred EEEeCCceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCcc
Confidence 9999999999999999999999999999999999999999999999999999999 5552
Q ss_pred ---------------------------------------------hhhhhccCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004752 379 ---------------------------------------------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 413 (732)
Q Consensus 379 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (732)
++++++||+|.++++|+..+.+. .+++..+.++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~--~~~~~~~~~~ 393 (720)
T PF03552_consen 316 KKKSKKKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGG--VPRSPSPASL 393 (720)
T ss_pred cccccccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcC--CCCCCChHHH
Confidence 03446799999999998865432 3445567899
Q ss_pred HHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCccc
Q 004752 414 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 493 (732)
Q Consensus 414 ~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~q 493 (732)
++||.+|+||.||++|+||+++||.|+++|||+.||++||++||||+||+|++++|.|.||+|+.+.+.|++|||.|++|
T Consensus 394 L~EA~~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslE 473 (720)
T PF03552_consen 394 LEEAIHVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLE 473 (720)
T ss_pred HHHHHHHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCccccC-CCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHHH
Q 004752 494 VGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHL 572 (732)
Q Consensus 494 i~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (732)
|++||+||+++| .++|++.||++|+++++|+ ++++|.++|+++|++||++|++++|+++.+++++|+++|++++++++
T Consensus 474 I~fSr~~Pl~~g~~~rL~~lQrLaY~~~~~yp-l~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~l 552 (720)
T PF03552_consen 474 IFFSRHCPLWYGYGGRLKFLQRLAYLNYMLYP-LTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSL 552 (720)
T ss_pred eehhcCCchhccCCCCCcHHHHHHHHHHhhhH-HHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHH
Confidence 999999999997 6799999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHHHH
Q 004752 573 QEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMV 652 (732)
Q Consensus 573 l~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~p~~ 652 (732)
+|++|+|+++++|||+||||+|.++++|+++++++++|++|+++++|.||+|+.++++.+. .+.|+|+ |+++++|.+
T Consensus 553 lE~~wsG~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~dde~~~~--~ely~f~-wS~LfiP~t 629 (720)
T PF03552_consen 553 LEFRWSGVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSDDEDDKY--AELYIFK-WSPLFIPPT 629 (720)
T ss_pred HHHHhccCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccccccccc--ccccccc-ccchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999988554433 3678888 889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhhh
Q 004752 653 SLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSII 730 (732)
Q Consensus 653 ~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~~~~ 730 (732)
+++++|++|+++|+++++..+ +|+++++++++++|++++++||++|||+||+ |+|+|+++||++||++|+++|+.|
T Consensus 630 TllilNLva~v~Gi~r~i~~g~~~~g~l~g~lf~~~wVvv~lyPf~kGL~~R~~--r~P~~v~v~S~lla~i~~llwv~i 707 (720)
T PF03552_consen 630 TLLILNLVAFVVGISRAINSGYGSWGPLLGQLFFSFWVVVHLYPFLKGLFGRKD--RIPTSVIVWSVLLASIFSLLWVRI 707 (720)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHhhHHHHhhhcccC--CcceeehHHHHHHHHHHHHHheec
Confidence 999999999999999988654 6889999999999999999999999999976 699999999999999999999876
Q ss_pred c
Q 004752 731 L 731 (732)
Q Consensus 731 ~ 731 (732)
+
T Consensus 708 ~ 708 (720)
T PF03552_consen 708 D 708 (720)
T ss_pred c
Confidence 4
No 11
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=5.5e-73 Score=669.65 Aligned_cols=508 Identities=25% Similarity=0.327 Sum_probs=410.6
Q ss_pred HHHHHHHHHH-HHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccccCCCCCCCCCCCCCceE
Q 004752 20 NRLHALLHCI-AIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID 98 (732)
Q Consensus 20 ~r~~~~~~~~-~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~Vd 98 (732)
-|++.++..+ +.+.|++||++.|++..+.....++++++++|+++.+..+++.+..++|.+|.+.+.+ .+++.+|+||
T Consensus 56 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~P~Vs 134 (713)
T TIGR03030 56 PRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVPLP-LDPEEWPTVD 134 (713)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCC-CCcccCCeeE
Confidence 3555555554 4678999999999997666677788999999999999888888888888887643322 2256789999
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+++++++|+.+++++|||+||++|+|+|||++|.|.....++++
T Consensus 135 ViIP~---yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~------------------------- 186 (713)
T TIGR03030 135 VFIPT---YNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQA------------------------- 186 (713)
T ss_pred EEEcC---CCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhh-------------------------
Confidence 99999 99999999999999999999999999999999999987543211111
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
+..+.+.++++..++ .++.|+.|+
T Consensus 187 ----------~~~~~~~~~~~l~~~----------------------------------------------~~v~yi~r~ 210 (713)
T TIGR03030 187 ----------EAAQRREELKEFCRK----------------------------------------------LGVNYITRP 210 (713)
T ss_pred ----------hhhhhHHHHHHHHHH----------------------------------------------cCcEEEECC
Confidence 000111222221111 147899998
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCCC---
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY--- 334 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~--- 334 (732)
+| +|+||||||+|+++ ++||||+++|||+++. ||+|++++++|. || ++|+||+||.|+|.+.-
T Consensus 211 ~n----~~~KAgnLN~al~~----a~gd~Il~lDAD~v~~-pd~L~~~v~~f~~dp----~v~~Vqtp~~f~~p~~~~~n 277 (713)
T TIGR03030 211 RN----VHAKAGNINNALKH----TDGELILIFDADHVPT-RDFLQRTVGWFVEDP----KLFLVQTPHFFVSPDPIERN 277 (713)
T ss_pred CC----CCCChHHHHHHHHh----cCCCEEEEECCCCCcC-hhHHHHHHHHHHhCC----CEEEEeCCeeccCCCHHhhh
Confidence 75 68999999999999 8999999999999997 999999999995 55 59999999999985321
Q ss_pred ----chHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCch
Q 004752 335 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 410 (732)
Q Consensus 335 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (732)
+.+.++.+.||..++.|.+.++++++||+|+++||+++++
T Consensus 278 l~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~~------------------------------------ 321 (713)
T TIGR03030 278 LGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALDE------------------------------------ 321 (713)
T ss_pred hHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHHH------------------------------------
Confidence 2234556789999999999999999999999999999963
Q ss_pred hhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 411 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 411 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
.+||++++++||++++++||++||+++|+++ +.+.|++|+|++++++||.||++|
T Consensus 322 -----------------------iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~--~~~~g~~p~sl~~~~~Qr~RWa~G 376 (713)
T TIGR03030 322 -----------------------IGGIAGETVTEDAETALKLHRRGWNSAYLDR--PLIAGLAPETLSGHIGQRIRWAQG 376 (713)
T ss_pred -----------------------cCCCCCCCcCcHHHHHHHHHHcCCeEEEecc--ccccccCCCCHHHHHHHHHHHhcC
Confidence 5689999999999999999999999999985 889999999999999999999999
Q ss_pred cccccccccCccccCCCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHH
Q 004752 491 LTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICK 570 (732)
Q Consensus 491 ~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (732)
++|+++. .||++. +++++.||++|+++++|+ +++++.++|+++|++++++|.+++++. +..++. .++++++.
T Consensus 377 ~~qi~~~-~~pl~~--~gl~~~qrl~y~~~~~~~-~~~~~~~~~~~~P~~~l~~~~~~~~~~---~~~~~~-~~lp~~~~ 448 (713)
T TIGR03030 377 MMQIFRL-DNPLLK--RGLSFPQRLCYLNAMLFW-FFPLPRVIFLTAPLAYLFFGLNIFVAS---ALEILA-YALPHMLH 448 (713)
T ss_pred hHHHHhh-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcceeCC---HHHHHH-HHHHHHHH
Confidence 9999974 589875 799999999999999998 999999999999999999999998752 222222 34666666
Q ss_pred HHHHHH-HhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhH
Q 004752 571 HLQEVI-STGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLV 649 (732)
Q Consensus 571 ~~l~~~-~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~ 649 (732)
+++.+. ..|.....||++ ++.+ ...++.+..++.+++++++.+|+||||++..++. . .++++.
T Consensus 449 ~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~~------~-----~~~~~~ 512 (713)
T TIGR03030 449 SLLTNSYLFGRVRWPFWSE----VYET-VLAVYLLPPVLVTLLNPKKPKFNVTPKGELLDED------Y-----FSPLSR 512 (713)
T ss_pred HHHHHHHHcCCeecchHHH----HHHH-HHHHHHHHHHHHHHhCcCCCCceecCCCcccccc------c-----cchHHH
Confidence 666543 356667789987 3433 3556777888888999999999999999865431 1 237899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCch
Q 004752 650 PMVSLMILNMAALLCGFIRIIAVGN-WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISP 710 (732)
Q Consensus 650 p~~~l~~l~l~al~~g~~r~~~~g~-~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip~ 710 (732)
|+++++++|++|+++|++|+...+. ...+..+++|++++++.+...+.+...|+++++-|.
T Consensus 513 p~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~n~~~~~~~~~~~~~r~QrR~~~R 574 (713)
T TIGR03030 513 PYLILFALILAGLAFGLYRIYGYPIERGVLLVVLGWNLLNLILLGAALAVVAERRQRRSSPR 574 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccccchhhHHHHHHHHHHHHHHHHHHHHccCCCCCCccc
Confidence 9999999999999999999874332 345678899999999999999999998888887554
No 12
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-73 Score=668.90 Aligned_cols=488 Identities=24% Similarity=0.337 Sum_probs=396.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhheeeccccCCCCCCCC-CCCCCceEE
Q 004752 21 RLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPE-DDKLPAIDV 99 (732)
Q Consensus 21 r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~-~~~~P~VdV 99 (732)
-+++++.+++.+.|++||++.|+|..+..+..++++++++|+++.+..+++.+..++|..|++. +++. .+.+|+|||
T Consensus 187 ~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~~--~~~~~~~~~P~VsV 264 (852)
T PRK11498 187 LMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPV--PLPKDMSLWPTVDI 264 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC--CCCcccCCCCcEEE
Confidence 3445555666888999999999997666778888999999999998888888888888877643 2333 567899999
Q ss_pred EEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccccC
Q 004752 100 FICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEA 179 (732)
Q Consensus 100 ~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~ 179 (732)
+||| |||+.+++++|+.+++++|||++|++|||+|||++|.|. + +|+++
T Consensus 265 iIPt---YNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~-------~-------la~~~-------------- 313 (852)
T PRK11498 265 FVPT---YNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFR-------Q-------FAQEV-------------- 313 (852)
T ss_pred EEec---CCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHH-------H-------HHHHC--------------
Confidence 9999 999989999999999999999999999999999998432 1 11111
Q ss_pred CCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEeccc
Q 004752 180 DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSREK 259 (732)
Q Consensus 180 ~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Rek 259 (732)
++.|++|++
T Consensus 314 -----------------------------------------------------------------------~v~yI~R~~ 322 (852)
T PRK11498 314 -----------------------------------------------------------------------GVKYIARPT 322 (852)
T ss_pred -----------------------------------------------------------------------CcEEEEeCC
Confidence 367998876
Q ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCCCc---
Q 004752 260 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYD--- 335 (732)
Q Consensus 260 rp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d--- 335 (732)
| .|+||||+|+|+++ ++||||+++|||+++. ||+|++++++| .|| ++|+||+||.|+|.++.+
T Consensus 323 n----~~gKAGnLN~aL~~----a~GEyIavlDAD~ip~-pdfL~~~V~~f~~dP----~VglVQtp~~f~n~dp~~rnl 389 (852)
T PRK11498 323 H----EHAKAGNINNALKY----AKGEFVAIFDCDHVPT-RSFLQMTMGWFLKDK----KLAMMQTPHHFFSPDPFERNL 389 (852)
T ss_pred C----CcchHHHHHHHHHh----CCCCEEEEECCCCCCC-hHHHHHHHHHHHhCC----CeEEEEcceeccCCchHHHhh
Confidence 5 68999999999999 8999999999999987 99999999876 566 599999999999853211
Q ss_pred ----hHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchh
Q 004752 336 ----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSN 411 (732)
Q Consensus 336 ----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (732)
.+.++.+.||+.++.|.+.+++.++||+++++||+++++
T Consensus 390 ~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLee------------------------------------- 432 (852)
T PRK11498 390 GRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDE------------------------------------- 432 (852)
T ss_pred HHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHHH-------------------------------------
Confidence 112345679999999999999999999999999999963
Q ss_pred hHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCc
Q 004752 412 VLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 491 (732)
Q Consensus 412 ~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 491 (732)
.|||++++++||+++++++|++||+++|+++ +.+.|++|+|++++++||.||++|+
T Consensus 433 ----------------------VGGfd~~titED~dlslRL~~~Gyrv~yl~~--~~a~glaPesl~~~~~QR~RWarG~ 488 (852)
T PRK11498 433 ----------------------IGGIAVETVTEDAHTSLRLHRRGYTSAYMRI--PQAAGLATESLSAHIGQRIRWARGM 488 (852)
T ss_pred ----------------------hcCCCCCccCccHHHHHHHHHcCCEEEEEec--cceeEECCCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999985 8999999999999999999999999
Q ss_pred ccccccccCccccCCCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHHH
Q 004752 492 TDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKH 571 (732)
Q Consensus 492 ~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (732)
+|+++ ++||++. +++++.||++|+++++|+ +.++|.++|+++|++|+++|+.++.+ ++..++.| ++++++..
T Consensus 489 lQi~r-~~~pl~~--~gL~~~qRl~y~~~~l~~-l~g~~~l~~l~~Pl~~l~~gi~~i~a---~~~~i~~y-~lP~~~~~ 560 (852)
T PRK11498 489 VQIFR-LDNPLTG--KGLKLAQRLCYANAMLHF-LSGIPRLIFLTAPLAFLLLHAYIIYA---PALMIALF-VLPHMIHA 560 (852)
T ss_pred HHHHH-HhChhcc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChheeC---ChHHHHHH-HHHHHHHH
Confidence 99997 5789875 799999999999999888 99999999999999999999988743 23333332 34544433
Q ss_pred HH-HHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhHH
Q 004752 572 LQ-EVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVP 650 (732)
Q Consensus 572 ~l-~~~~~g~~~~~ww~~~~~w~i~~~~~~l~~~~~~l~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~p 650 (732)
.+ ....+|.....||++ ++.++.+ ++....++..++++++.+|+||||++..++ +.|+|+ +..|
T Consensus 561 ~l~~~~~~g~~r~~~wse----iye~v~a-~~l~~~~~~~ll~p~~~~F~VTpKg~~~~~------~~~~~~----~~~P 625 (852)
T PRK11498 561 SLTNSRIQGKYRHSFWSE----IYETVLA-WYIAPPTTVALFNPHKGKFNVTAKGGLVEE------EYVDWV----ISRP 625 (852)
T ss_pred HHHHHHhcCcchHhHHHH----HHHHHHH-HHHHHHHHHHHcCccCCCcccCCCCccccc------cceehH----HHHH
Confidence 33 333456666678877 3444433 444455666789999999999999976544 667776 4568
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC--cchhHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 004752 651 MVSLMILNMAALLCGFIRIIAVGN--WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRIS 709 (732)
Q Consensus 651 ~~~l~~l~l~al~~g~~r~~~~g~--~~~~~~~~~~~~w~vv~l~p~~~al~~r~~~~~ip 709 (732)
+++++++|++|+++|++++..+.. ......+++|++++++++...+.+.+.++..++-|
T Consensus 626 ~~~L~~L~l~gl~~g~~r~~~~~~~~~~~~~~~~~W~~~nl~~l~~a~~~~~e~~~~r~~~ 686 (852)
T PRK11498 626 YIFLVLLNLVGVAVGIWRYFYGPPNEILTVIVSLVWVFYNLIILGGAVAVSVESKQVRRSH 686 (852)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccchhhhhhHHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence 999999999999999999876322 24556788888888888888888888877655544
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=3.5e-39 Score=376.53 Aligned_cols=360 Identities=17% Similarity=0.123 Sum_probs=251.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCc--hhHH---HHHHHHHHHHHHHHHHHHHHhhheeeccccCC----CC-CC
Q 004752 19 INRLHALLHCIAIGFLIYYRASYLLQETRA--IPII---LWLLVFASELLLSFIWLLGRAYLWRPVSRTVF----PE-RL 88 (732)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~--~~~~---~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~----~~-~l 88 (732)
+.|++.++..++...|..|+...+++..+. .... +-.+++..+.+.+..-+++.+.... .|+.. +. .-
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 678888888888999999999998876432 1111 2234445555555445555444322 12111 11 00
Q ss_pred CCCCCCCceEEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhh
Q 004752 89 PEDDKLPAIDVFICTADPEKEPAIG----VMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (732)
Q Consensus 89 ~~~~~~P~VdV~I~t~~pynEp~~~----v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~ 164 (732)
+.....|+|+|+||+ |||+++. ++.+++|+.+++||. +++++|+|||++|.|-..
T Consensus 118 ~~~~~~~~VaVliP~---yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~d~~~~~~----------------- 176 (691)
T PRK05454 118 PPPPPEARTAILMPI---YNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTRDPDIAAA----------------- 176 (691)
T ss_pred CCCCCCCceEEEEeC---CCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCCChhHHHH-----------------
Confidence 113567999999999 9999864 555666777799984 799999999999854210
Q ss_pred cCccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhc
Q 004752 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQA 244 (732)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 244 (732)
|+ +.+++++.+.
T Consensus 177 ----------------------------e~----~~~~~L~~~~------------------------------------ 188 (691)
T PRK05454 177 ----------------------------EE----AAWLELRAEL------------------------------------ 188 (691)
T ss_pred ----------------------------HH----HHHHHHHHhc------------------------------------
Confidence 10 1122222111
Q ss_pred cccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEc
Q 004752 245 DLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQ 323 (732)
Q Consensus 245 ~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ 323 (732)
..-+++.|.+|++| .++||||+|.+++.++ .++|||+++|||++++ ||++++++++|. || ++|.||
T Consensus 189 --~~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m~-~d~L~~lv~~m~~dP----~vGlVQ 255 (691)
T PRK05454 189 --GGEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLMS-GDTLVRLVRLMEANP----RAGLIQ 255 (691)
T ss_pred --CCCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCCC-HHHHHHHHHHHhhCc----CEEEEe
Confidence 01136889888776 6789999999999976 6789999999999998 999999999986 66 599999
Q ss_pred cCcccccCCCCchHHHHH----HHHHHHHHHHHhhcCC--ccceeccEEEechhccccccchhhhhccCCchhhhhhhhh
Q 004752 324 FPQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQ 397 (732)
Q Consensus 324 ~Pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (732)
+++.+.|. +..++.-+ .++......|.+.|++ ..|+|+|+++||+++.+.
T Consensus 256 t~~~~~n~--~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~---------------------- 311 (691)
T PRK05454 256 TLPVAVGA--DTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEH---------------------- 311 (691)
T ss_pred CCccCcCC--CCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHh----------------------
Confidence 99999885 23444322 2334456778887763 478999999999999641
Q ss_pred hhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCCh
Q 004752 398 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNL 477 (732)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l 477 (732)
|.... ....+||..++++||++++.+++++|||++|+++ .+.+++++|+|+
T Consensus 312 -------------------------~glp~---L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~~~~ee~P~tl 362 (691)
T PRK05454 312 -------------------------CGLPP---LPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LPGSYEELPPNL 362 (691)
T ss_pred -------------------------cCCcc---ccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cccccccCCCCH
Confidence 11100 0013578889999999999999999999999974 256899999999
Q ss_pred HHHhhhhhccccCcccccccccCccccCCCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHH
Q 004752 478 NDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLC 541 (732)
Q Consensus 478 ~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ 541 (732)
.++++||.||++|++|++.. +.. +++++.+|++|++..+.++...++.+++++.|++.
T Consensus 363 ~~~~~qr~RW~~G~lQ~l~~----l~~--~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~ 420 (691)
T PRK05454 363 LDELKRDRRWCQGNLQHLRL----LLA--KGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALA 420 (691)
T ss_pred HHHHHHHHHHHhchHHHHHH----HHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998742 222 68999999998876555422233333344444433
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=6.6e-36 Score=337.18 Aligned_cols=231 Identities=18% Similarity=0.161 Sum_probs=187.3
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
.+..|.|+|+||+ |||+ ..+.+|+.|+++++||. ++|+|+|||++|.|.+.+.+..+
T Consensus 71 ~~~~p~vsViIP~---yNE~-~~i~~~l~sll~q~yp~--~eIivVdDgs~D~t~~~~~~~~~----------------- 127 (444)
T PRK14583 71 LKGHPLVSILVPC---FNEG-LNARETIHAALAQTYTN--IEVIAINDGSSDDTAQVLDALLA----------------- 127 (444)
T ss_pred cCCCCcEEEEEEe---CCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCCccHHHHHHHHHH-----------------
Confidence 4467999999999 9999 66899999999999995 99999999999977643322110
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
..|
T Consensus 128 -----------------------------------------------------------------------------~~~ 130 (444)
T PRK14583 128 -----------------------------------------------------------------------------EDP 130 (444)
T ss_pred -----------------------------------------------------------------------------hCC
Confidence 113
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCccccc
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHN 330 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n 330 (732)
++.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||++++++..|.+ ++++|.||+.....|
T Consensus 131 ~v~vv~~~~-----n~Gka~AlN~gl~~----a~~d~iv~lDAD~~~~-~d~L~~lv~~~~~---~~~~g~v~g~~~~~~ 197 (444)
T PRK14583 131 RLRVIHLAH-----NQGKAIALRMGAAA----ARSEYLVCIDGDALLD-KNAVPYLVAPLIA---NPRTGAVTGNPRIRT 197 (444)
T ss_pred CEEEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCcC-HHHHHHHHHHHHh---CCCeEEEEccceecC
Confidence 466665544 36799999999999 8999999999999987 9999999987752 236999999877665
Q ss_pred CCCCchHHH----HHHHHHHHHHHHHhhcCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCC
Q 004752 331 INKYDIYDG----RFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 405 (732)
Q Consensus 331 ~~~~d~~~~----~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (732)
. +..++. +...+++.+.++.+.++..+ .+|+++.+||+++.+
T Consensus 198 ~--~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~~------------------------------- 244 (444)
T PRK14583 198 R--STLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALAD------------------------------- 244 (444)
T ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHHH-------------------------------
Confidence 3 223322 33345556667777676664 468999999999962
Q ss_pred CCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhh
Q 004752 406 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 485 (732)
Q Consensus 406 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~ 485 (732)
.+||++++++||++++++++.+||++.|+++ +.++++.|+|++++++||.
T Consensus 245 ----------------------------vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~--a~~~~~~p~t~~~~~~Qr~ 294 (444)
T PRK14583 245 ----------------------------VGYWSPDMITEDIDISWKLQLKHWSVFFEPR--GLCWILMPETLRGLWKQRL 294 (444)
T ss_pred ----------------------------cCCCCCCcccccHHHHHHHHHcCCeEEEeec--cEEeeeCCCCHHHHHHHHH
Confidence 4679999999999999999999999999985 9999999999999999999
Q ss_pred ccccCccccccc
Q 004752 486 RWGSGLTDVGLS 497 (732)
Q Consensus 486 RWa~G~~qi~~~ 497 (732)
||++|.+|+++.
T Consensus 295 RW~~G~~~~~~~ 306 (444)
T PRK14583 295 RWAQGGAEVFLK 306 (444)
T ss_pred HHhCcHHHHHHH
Confidence 999999999974
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=1.1e-36 Score=318.95 Aligned_cols=241 Identities=16% Similarity=0.195 Sum_probs=185.7
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCc
Q 004752 97 IDVFICTADPEKEPAIGVMNTVLSAMA----LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (732)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~----~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (732)
|+|+||+ |||+++++.+|+.+.+. ++|+. +++|+|+|||+++...
T Consensus 1 ~SIliP~---~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~--------------------------- 49 (254)
T cd04191 1 TAIVMPV---YNEDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIW--------------------------- 49 (254)
T ss_pred CEEEEeC---CCCCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHH---------------------------
Confidence 6899999 99999999999999875 57633 4999999999987210
Q ss_pred ccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcE
Q 004752 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLL 252 (732)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 252 (732)
..|+..+.+..+++ ...+++
T Consensus 50 ------------------~~~~~~~~~l~~~~------------------------------------------~~~~~v 69 (254)
T cd04191 50 ------------------LAEEAAWLDLCEEL------------------------------------------GAQGRI 69 (254)
T ss_pred ------------------HHHHHHHHHHHHHh------------------------------------------CCCCcE
Confidence 00111111111111 013579
Q ss_pred EEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccC
Q 004752 253 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNI 331 (732)
Q Consensus 253 ~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~ 331 (732)
+|++|+++ .|.||||||+++...+ +++|||+++|||+++. |++|.+++.+|. || ++|.||+|+.+.|.
T Consensus 70 ~~~~r~~~----~g~Kag~l~~~~~~~~--~~~~~i~~~DaD~~~~-p~~l~~~v~~~~~~~----~vg~vq~~~~~~n~ 138 (254)
T cd04191 70 YYRRRREN----TGRKAGNIADFCRRWG--SRYDYMVVLDADSLMS-GDTIVRLVRRMEANP----RAGIIQTAPKLIGA 138 (254)
T ss_pred EEEEcCCC----CCccHHHHHHHHHHhC--CCCCEEEEEeCCCCCC-HHHHHHHHHHHHhCC----CEEEEeCCceeECC
Confidence 99999886 6889999999998744 6889999999999998 999999999996 66 59999999999986
Q ss_pred CCCchHHHH----HHHHHHHHHHHHhhcCC--ccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCC
Q 004752 332 NKYDIYDGR----FRSAYCVQWQGMDGLKG--PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 405 (732)
Q Consensus 332 ~~~d~~~~~----~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (732)
+ ..+.+- ...|...++.|++.|++ .+|+|+++++||++|++.
T Consensus 139 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~------------------------------ 186 (254)
T cd04191 139 E--TLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEH------------------------------ 186 (254)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHh------------------------------
Confidence 3 223322 23455677888887754 578999999999999640
Q ss_pred CCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCe-eEeccCCChHHHhhhh
Q 004752 406 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ-FLGTSTTNLNDLLIQG 484 (732)
Q Consensus 406 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~-~~g~aP~~l~~~~~Qr 484 (732)
|.. ...|..+||.+++++||+++|++++++|||++|.++ +. +.+++|+|++++++||
T Consensus 187 -----------------~~~---~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~--~~~~~~~~p~~~~~~~~qr 244 (254)
T cd04191 187 -----------------CAL---PVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPD--LEGSYEECPPTLIDFLKRD 244 (254)
T ss_pred -----------------cCC---ccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccC--CcceEeECCCCHHHHHHHH
Confidence 000 011224578889999999999999999999999985 54 5899999999999999
Q ss_pred hccccCccc
Q 004752 485 TRWGSGLTD 493 (732)
Q Consensus 485 ~RWa~G~~q 493 (732)
.||++|++|
T Consensus 245 ~RW~~G~~q 253 (254)
T cd04191 245 RRWCQGNLQ 253 (254)
T ss_pred HHHHhhcCc
Confidence 999999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1e-35 Score=332.86 Aligned_cols=257 Identities=26% Similarity=0.292 Sum_probs=192.2
Q ss_pred HHHhhheeeccccCCCCCCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHH
Q 004752 70 LGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMR 149 (732)
Q Consensus 70 l~~~~~~~p~~r~~~~~~l~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~ 149 (732)
...+....+..+...+...+.+...|.|||+||+ |||+++++++|+.|++++|||. ++|+|+|||++|.|.+.+.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~p~vsviiP~---ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~~d~~~~~~~ 103 (439)
T COG1215 29 LGYLLLVLPLSRPRKKLPKDADKLLPKVSVIIPA---YNEEPEVLEETLESLLSQDYPR--YEVIVVDDGSTDETYEILE 103 (439)
T ss_pred HHHHHHhhhhhccccCCCCcccccCCceEEEEec---CCCchhhHHHHHHHHHhCCCCC--ceEEEECCCCChhHHHHHH
Confidence 3334455555544322221112226999999999 9999889999999999999997 8999999999996654222
Q ss_pred HHHHhhhcchhhhhhcCccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhh
Q 004752 150 EACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQ 229 (732)
Q Consensus 150 Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~ 229 (732)
+++.+ + +
T Consensus 104 --------------~~~~~--------------------------------~----------------------~----- 110 (439)
T COG1215 104 --------------ELGAE--------------------------------Y----------------------G----- 110 (439)
T ss_pred --------------HHHhh--------------------------------c----------------------C-----
Confidence 22110 0 0
Q ss_pred hhhcccCcchhhhhccccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHh
Q 004752 230 IIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCF 309 (732)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~ 309 (732)
|.++-+..++ .+++|++|+|.++.. +++|+|+++|||++++ ||+|++++.+
T Consensus 111 --------------------~~~~~~~~~~----~~~gK~~al~~~l~~----~~~d~V~~~DaD~~~~-~d~l~~~~~~ 161 (439)
T COG1215 111 --------------------PNFRVIYPEK----KNGGKAGALNNGLKR----AKGDVVVILDADTVPE-PDALRELVSP 161 (439)
T ss_pred --------------------cceEEEeccc----cCccchHHHHHHHhh----cCCCEEEEEcCCCCCC-hhHHHHHHhh
Confidence 1122221112 268999999999999 8899999999999998 9999999999
Q ss_pred hcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHH-----HHHHHHhhcCCccceeccEEEechhccccccchhhhhc
Q 004752 310 HLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYC-----VQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDT 384 (732)
Q Consensus 310 f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~-----~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~ 384 (732)
|.|+. .+|.+|.|+.+.+.+....++......|. ....+.+.....+++|+++++||++|.+
T Consensus 162 f~~~~---~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~~---------- 228 (439)
T COG1215 162 FEDPP---VGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALEE---------- 228 (439)
T ss_pred hcCCC---eeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHHH----------
Confidence 99875 34799999887764221222222222222 2222333334568899999999999963
Q ss_pred cCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCC
Q 004752 385 FGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||..+++|||.++++++|.+|||+.|+++
T Consensus 229 -------------------------------------------------~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~ 259 (439)
T COG1215 229 -------------------------------------------------VGGWLEDTITEDADLTLRLHLRGYRVVYVPE 259 (439)
T ss_pred -------------------------------------------------hCCCCCCceeccHHHHHHHHHCCCeEEEeec
Confidence 4579999999999999999999999999985
Q ss_pred CCCeeEeccCCChHHHhhhhhccccCccccccc
Q 004752 465 FRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLS 497 (732)
Q Consensus 465 ~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~ 497 (732)
+.+.+++|+|+.++++||.||++|++|++..
T Consensus 260 --~~~~~~~p~t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 260 --AIVWTEAPETLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred --ceEeeeCcccHHHHHHHHHHHHcccceeeeh
Confidence 8999999999999999999999999999974
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.3e-33 Score=315.65 Aligned_cols=230 Identities=21% Similarity=0.234 Sum_probs=184.4
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
....|+|+|+||+ |||+ +.+++|+.|+++++||. .+|+|+|||++|.|.+.+.+.+
T Consensus 50 ~~~~p~vsViIp~---yne~-~~i~~~l~sl~~q~yp~--~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPC---YNEG-ENVEETISHLLALRYPN--YEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHHH------------------
Confidence 4567999999999 9998 78999999999999994 8999999999997754322210
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
...|
T Consensus 106 ----------------------------------------------------------------------------~~~~ 109 (420)
T PRK11204 106 ----------------------------------------------------------------------------AQIP 109 (420)
T ss_pred ----------------------------------------------------------------------------HhCC
Confidence 0124
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccc
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH 329 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~ 329 (732)
++.++.+++ +++||+|+|.|++. +++|+++++|||++++ ||+|.+++..|. || +++.||+.....
T Consensus 110 ~v~~i~~~~-----n~Gka~aln~g~~~----a~~d~i~~lDaD~~~~-~d~L~~l~~~~~~~~----~v~~v~g~~~~~ 175 (420)
T PRK11204 110 RLRVIHLAE-----NQGKANALNTGAAA----ARSEYLVCIDGDALLD-PDAAAYMVEHFLHNP----RVGAVTGNPRIR 175 (420)
T ss_pred cEEEEEcCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CeEEEECCceec
Confidence 577887655 36799999999999 8999999999999997 999999999884 55 599999987766
Q ss_pred cCCCCchHHHHH----HHHHHHHHHHHhhcCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCC
Q 004752 330 NINKYDIYDGRF----RSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNA 404 (732)
Q Consensus 330 n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (732)
|. ....+..+ ...+.....+....+... .+|+++++||+++.+
T Consensus 176 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~------------------------------ 223 (420)
T PRK11204 176 NR--STLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALHE------------------------------ 223 (420)
T ss_pred cc--hhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHHH------------------------------
Confidence 53 22233222 122233344444444443 368889999999962
Q ss_pred CCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhh
Q 004752 405 NGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQG 484 (732)
Q Consensus 405 ~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr 484 (732)
.+||+++.++||++++++++++||++.|+++ +.++++.|+|++++++||
T Consensus 224 -----------------------------vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~--~~~~~~~p~t~~~~~~Qr 272 (420)
T PRK11204 224 -----------------------------VGYWSTDMITEDIDISWKLQLRGWDIRYEPR--ALCWILMPETLKGLWKQR 272 (420)
T ss_pred -----------------------------hCCCCCCcccchHHHHHHHHHcCCeEEeccc--cEEEeECcccHHHHHHHH
Confidence 4679999999999999999999999999985 899999999999999999
Q ss_pred hccccCccccccc
Q 004752 485 TRWGSGLTDVGLS 497 (732)
Q Consensus 485 ~RWa~G~~qi~~~ 497 (732)
.||++|++|.++.
T Consensus 273 ~RW~~G~~~~l~~ 285 (420)
T PRK11204 273 LRWAQGGAEVLLK 285 (420)
T ss_pred HHHhcCHHHHHHH
Confidence 9999999999874
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=3.6e-34 Score=322.58 Aligned_cols=282 Identities=17% Similarity=0.165 Sum_probs=203.0
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
.+..|+|+|+||+ |||+ +.+.+||.|+.+++||.++++|+|+|||++|.|.+.+.++++
T Consensus 45 ~~~~P~vsVIIP~---yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~----------------- 103 (439)
T TIGR03111 45 IGKLPDITIIIPV---YNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN----------------- 103 (439)
T ss_pred cCCCCCEEEEEEe---CCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH-----------------
Confidence 3568999999999 9999 899999999999999999999999999999987654333210
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
..|
T Consensus 104 -----------------------------------------------------------------------------~~~ 106 (439)
T TIGR03111 104 -----------------------------------------------------------------------------EFP 106 (439)
T ss_pred -----------------------------------------------------------------------------hCC
Confidence 012
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccc
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFH 329 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~ 329 (732)
++..+..++ ++|||+|+|.|++. ++||||+++|||+++. ||++++++..|. || +++.|++.+.-.
T Consensus 107 ~v~v~~~~~-----~~Gka~AlN~gl~~----s~g~~v~~~DaD~~~~-~d~L~~l~~~f~~~~----~v~~v~g~~~~~ 172 (439)
T TIGR03111 107 GLSLRYMNS-----DQGKAKALNAAIYN----SIGKYIIHIDSDGKLH-KDAIKNMVTRFENNP----DIHAMTGVILTD 172 (439)
T ss_pred CeEEEEeCC-----CCCHHHHHHHHHHH----ccCCEEEEECCCCCcC-hHHHHHHHHHHHhCC----CeEEEEeEEecC
Confidence 222222222 47899999999999 8999999999999986 999999999886 55 466665543211
Q ss_pred cC--CC-Cc---hHHHHHHHHHHHHH-----HHHhh-cCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhh
Q 004752 330 NI--NK-YD---IYDGRFRSAYCVQW-----QGMDG-LKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLH 396 (732)
Q Consensus 330 n~--~~-~d---~~~~~~~~f~~~~~-----~g~d~-~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~ 396 (732)
.. +. .. .+..+.. +++... ++... .+..+ ++|+++++||+++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~---------------------- 229 (439)
T TIGR03111 173 KELIEKTKGRFLKLIRRCE-YFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETILK---------------------- 229 (439)
T ss_pred chhhhhhcchhhhHhHHhH-HHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHHHH----------------------
Confidence 10 00 00 1111111 222211 11222 23332 467888899999962
Q ss_pred hhhcccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHh-CCCeEEEeCCCCCeeEeccCC
Q 004752 397 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHC-KGWTSTYLTPFRPQFLGTSTT 475 (732)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~-~Gwrsvy~~~~~~~~~g~aP~ 475 (732)
.+||+.++++||++++++++. .|+++.|+++ +.++.++|+
T Consensus 230 -------------------------------------vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~--a~~~~~~p~ 270 (439)
T TIGR03111 230 -------------------------------------TQLYNSETVGEDTDMTFQIRELLDGKVYLCEN--AIFYVDPID 270 (439)
T ss_pred -------------------------------------hCCCCCCCcCccHHHHHHHHHhcCCeEEECCC--CEEEEECCc
Confidence 568999999999999999975 6999999985 899999999
Q ss_pred ChHHHhhhhhccccCcccccccccCccccCCCCCChhhHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCccc
Q 004752 476 NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLY 549 (732)
Q Consensus 476 ~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~Ll~g~~~~ 549 (732)
|++++++||.||++|.+|++....++... .+.++.+++.+....... ...+|.+++.++++++.++|.++.
T Consensus 271 t~~~~~~QR~RW~rG~~qv~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (439)
T TIGR03111 271 GLNKLYTQRQRWQRGELEVSHMFFESANK--SIKGFFSNFMVRRIMYDH-TFAFPRMIWYFAMIFLIFLGYPVK 341 (439)
T ss_pred CHHHHHHHHHHHhccHHHHHHHHHhhhhh--chhhhhhHHHHHHHHhhH-hhHHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999643233322 345566666554443333 567788888889998888886554
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1.9e-30 Score=294.11 Aligned_cols=262 Identities=16% Similarity=0.129 Sum_probs=183.4
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKT 169 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~ 169 (732)
....|+|+|+||+ |||+ +++.+||.+++ ++||| +++|+|+||+++|.|.+.+.+.++
T Consensus 62 ~~~~p~vaIlIPA---~NE~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~~---------------- 119 (504)
T PRK14716 62 SVPEKRIAIFVPA---WREA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLAA---------------- 119 (504)
T ss_pred cCCCCceEEEEec---cCch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHHH----------------
Confidence 3458999999999 9998 89999999964 78997 499999999999988654433210
Q ss_pred cCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCc
Q 004752 170 ICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEM 249 (732)
Q Consensus 170 r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (732)
.+
T Consensus 120 ------------------------------------------------------------------------------~~ 121 (504)
T PRK14716 120 ------------------------------------------------------------------------------RY 121 (504)
T ss_pred ------------------------------------------------------------------------------HC
Confidence 12
Q ss_pred CcEEEEecccCCCCCCCChHHHHHHHHHhcC--CCCCC---CEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEcc
Q 004752 250 PLLVYVSREKRPEHLHHFKAGALNVLLRVSG--VISNS---PYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 324 (732)
Q Consensus 250 p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~--~~s~g---e~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 324 (732)
|+++.+. .+++| .++||+|||.+++..- ...+| |+|+++|||+++. |++|+.....+.| .++||.
T Consensus 122 p~v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~-Pd~Lr~~~~~~~~------~~~VQ~ 191 (504)
T PRK14716 122 PRVHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIH-PLELRLYNYLLPR------HDFVQL 191 (504)
T ss_pred CCeEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcC-ccHHHHHHhhcCC------CCEEec
Confidence 3444333 22333 3689999999997520 00234 9999999999997 9999876655533 468999
Q ss_pred CcccccCCCCchHHHHH----HHHHHHHHHHHhhcCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhhhhh
Q 004752 325 PQKFHNINKYDIYDGRF----RSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSY 399 (732)
Q Consensus 325 Pq~f~n~~~~d~~~~~~----~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (732)
|....+.+.....+... ...+...+..++.+++++ ++|+|+.+||++|+..
T Consensus 192 pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l------------------------ 247 (504)
T PRK14716 192 PVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERL------------------------ 247 (504)
T ss_pred ceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHH------------------------
Confidence 98665532222212111 111223355678888775 6899999999999630
Q ss_pred cccCCCCCCchhhHHHhhccccccceeccccccccc-cccCCCccchHHHHHHHHhCCCeEEEeCCCCC-----------
Q 004752 400 KQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV-GILYQSVSEDLFTGFILHCKGWTSTYLTPFRP----------- 467 (732)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~-G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~----------- 467 (732)
.++ ..+ +|+++++|||+++|++++.+|||++|++. +
T Consensus 248 --------------~~~----------------~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~--ai~~~~~~~~~~ 295 (504)
T PRK14716 248 --------------AAE----------------RGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRV--RADDTTDRPDRR 295 (504)
T ss_pred --------------Hhh----------------cCCCCCCCCCcchHHHHHHHHHHCCCEEEEecc--cccccccccccc
Confidence 000 012 39999999999999999999999999985 4
Q ss_pred ----eeEeccCCChHHHhhhhhccccCc-ccccccc-c-CccccCCCCCChhhHHHHHHH
Q 004752 468 ----QFLGTSTTNLNDLLIQGTRWGSGL-TDVGLSR-F-CPLLYGPSRMSLLQSMCYGEL 520 (732)
Q Consensus 468 ----~~~g~aP~~l~~~~~Qr~RWa~G~-~qi~~~~-~-~pl~~~~~~l~~~qrl~y~~~ 520 (732)
...+++|+|++++++||.||+.|. +|..... + .++. .+.+.+++|..-+..
T Consensus 296 ~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~ 353 (504)
T PRK14716 296 GEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTN 353 (504)
T ss_pred cccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHH
Confidence 245889999999999999999995 7876421 1 1111 234667777766544
No 20
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=1.6e-30 Score=266.75 Aligned_cols=227 Identities=24% Similarity=0.317 Sum_probs=176.6
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|+|+|+||+ |||+ +.+.++|.|+++++||.++++|+|+|| ++|.|.+.+.+..+
T Consensus 1 p~vSViIp~---yNe~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPV---FNEK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEec---CCcH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 689999999 9998 789999999999999999999999998 88878754433210
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
.+.+ .-+++.+
T Consensus 55 -------------------------~~~~--------------------------------------------~~~~i~~ 65 (232)
T cd06437 55 -------------------------EYAA--------------------------------------------QGVNIKH 65 (232)
T ss_pred -------------------------HHhh--------------------------------------------cCCceEE
Confidence 0000 0134677
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 334 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 334 (732)
+.+.++ .++|++|+|.+++. ++||||+++|||++++ |++|++++.++.|| ++|+||.+..+.|.+.
T Consensus 66 ~~~~~~----~G~k~~a~n~g~~~----a~~~~i~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~~~- 131 (232)
T cd06437 66 VRRADR----TGYKAGALAEGMKV----AKGEYVAIFDADFVPP-PDFLQKTPPYFADP----KLGFVQTRWGHINANY- 131 (232)
T ss_pred EECCCC----CCCchHHHHHHHHh----CCCCEEEEEcCCCCCC-hHHHHHhhhhhcCC----CeEEEecceeeEcCCC-
Confidence 776554 46799999999999 8999999999999997 99999988877666 4999998776655321
Q ss_pred chHHHH----HHHHHHHHHHHHhhcCCc-cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCc
Q 004752 335 DIYDGR----FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 409 (732)
Q Consensus 335 d~~~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (732)
..+..- ...++.....+....+.. .++|+++++||+++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~----------------------------------- 176 (232)
T cd06437 132 SLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIED----------------------------------- 176 (232)
T ss_pred chhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHHH-----------------------------------
Confidence 112111 112334444454444443 3589999999999852
Q ss_pred hhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhcccc
Q 004752 410 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 489 (732)
Q Consensus 410 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 489 (732)
.+||+..+..||+++++|++.+||+++|+++ +.+++..|+|++++++||+||++
T Consensus 177 ------------------------vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~rW~~ 230 (232)
T cd06437 177 ------------------------AGGWNHDTLTEDLDLSYRAQLKGWKFVYLDD--VVVPAELPASMSAYRSQQHRWSK 230 (232)
T ss_pred ------------------------hCCCCCCcchhhHHHHHHHHHCCCeEEEecc--ceeeeeCCcCHHHHHHHHHHhcc
Confidence 4679988899999999999999999999985 89999999999999999999999
Q ss_pred Cc
Q 004752 490 GL 491 (732)
Q Consensus 490 G~ 491 (732)
|.
T Consensus 231 g~ 232 (232)
T cd06437 231 GP 232 (232)
T ss_pred CC
Confidence 94
No 21
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=3.1e-30 Score=263.08 Aligned_cols=230 Identities=35% Similarity=0.482 Sum_probs=187.1
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|.|+|+||+ |||+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsviip~---~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~---------------------- 55 (234)
T cd06421 1 PTVDVFIPT---YNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELG---------------------- 55 (234)
T ss_pred CceEEEEec---CCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhh----------------------
Confidence 789999999 9998789999999999999999899999999999986543221100
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
. . .++.+
T Consensus 56 -------------------------------~-----------------------------------------~-~~~~~ 62 (234)
T cd06421 56 -------------------------------V-----------------------------------------E-YGYRY 62 (234)
T ss_pred -------------------------------c-----------------------------------------c-cCceE
Confidence 0 0 02456
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 334 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 334 (732)
+.++++ .++|+||+|.|++. ++||||+++|+|.+++ |++|.+++..|.+ +++++.|++++.+.+.+..
T Consensus 63 ~~~~~~----~~~~~~~~n~~~~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~~~~ 130 (234)
T cd06421 63 LTRPDN----RHAKAGNLNNALAH----TTGDFVAILDADHVPT-PDFLRRTLGYFLD---DPKVALVQTPQFFYNPDPF 130 (234)
T ss_pred EEeCCC----CCCcHHHHHHHHHh----CCCCEEEEEccccCcC-ccHHHHHHHHHhc---CCCeEEEecceEEecCCcc
Confidence 655543 57899999999998 8999999999999997 9999999999875 2358999999888765432
Q ss_pred c----hHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCch
Q 004752 335 D----IYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 410 (732)
Q Consensus 335 d----~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (732)
+ .+......++..+..+.+.++...++|++.++||+++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~~------------------------------------ 174 (234)
T cd06421 131 DWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALDE------------------------------------ 174 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHHH------------------------------------
Confidence 1 222333445566666666667778899999999999952
Q ss_pred hhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 411 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 411 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
.+||+.+.+.||++++++++++||+++|+++ +.+.+..|+++.++++||.||.+|
T Consensus 175 -----------------------ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 229 (234)
T cd06421 175 -----------------------IGGFPTDSVTEDLATSLRLHAKGWRSVYVPE--PLAAGLAPETLAAYIKQRLRWARG 229 (234)
T ss_pred -----------------------hCCCCccceeccHHHHHHHHHcCceEEEecC--ccccccCCccHHHHHHHHHHHhcC
Confidence 4578888899999999999999999999986 889999999999999999999999
Q ss_pred ccccc
Q 004752 491 LTDVG 495 (732)
Q Consensus 491 ~~qi~ 495 (732)
++|++
T Consensus 230 ~~~~~ 234 (234)
T cd06421 230 MLQIL 234 (234)
T ss_pred CeeeC
Confidence 99964
No 22
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=7.4e-28 Score=283.01 Aligned_cols=240 Identities=20% Similarity=0.208 Sum_probs=173.4
Q ss_pred CCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhc
Q 004752 87 RLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRY 165 (732)
Q Consensus 87 ~l~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~ 165 (732)
.++ ++..|+|+|+||+ |||+ .++.+|+.+++ ++|||+ ++|+++||++++.|.+.+.+.+ +
T Consensus 56 ~l~-~~~~~~vsIlVPa---~nE~-~vi~~~i~~ll~~ldYP~--~eI~vi~~~nD~~T~~~~~~l~----------~-- 116 (727)
T PRK11234 56 ELY-KPDEKPLAIMVPA---WNET-GVIGNMAELAATTLDYEN--YHIFVGTYPNDPATQADVDAVC----------A-- 116 (727)
T ss_pred hcc-cCCCCCEEEEEec---Ccch-hhHHHHHHHHHHhCCCCC--eEEEEEecCCChhHHHHHHHHH----------H--
Confidence 344 4567999999999 9999 89999999987 799997 9999999888776664332221 1
Q ss_pred CccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhcc
Q 004752 166 GIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQAD 245 (732)
Q Consensus 166 ~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 245 (732)
T Consensus 117 -------------------------------------------------------------------------------- 116 (727)
T PRK11234 117 -------------------------------------------------------------------------------- 116 (727)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCC-----CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEE
Q 004752 246 LVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI-----SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLA 320 (732)
Q Consensus 246 ~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~-----s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg 320 (732)
++|+++.+.-+ ++| .++||+|||+++...-.. ...++++++|||.++. |++|+ .+.++.++ . +
T Consensus 117 --~~p~~~~v~~~-~~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~-pd~L~-~~~~l~~~----~-~ 184 (727)
T PRK11234 117 --RFPNVHKVVCA-RPG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVIS-PMELR-LFNYLVER----K-D 184 (727)
T ss_pred --HCCCcEEEEeC-CCC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCC-hhHHH-HHHhhcCC----C-C
Confidence 11333333222 233 468999999999873100 2346788899999997 99997 67788764 2 8
Q ss_pred EEccCcccccCCCCchHHH----HHHHHHHHHHHHHhhcCCc-cceeccEEE-ec--hhccccccchhhhhccCCchhhh
Q 004752 321 FVQFPQKFHNINKYDIYDG----RFRSAYCVQWQGMDGLKGP-VLSGTGYYI-KR--ESLYADFTHTELKDTFGKSNVLI 392 (732)
Q Consensus 321 ~VQ~Pq~f~n~~~~d~~~~----~~~~f~~~~~~g~d~~~~~-~~~Gtg~~~-RR--~AL~~~~~~~~~~~~~~~~~~~~ 392 (732)
+||.|....+.+.+...+. +....+...+++++.++++ .+.|+|+.| || ++|.+
T Consensus 185 ~VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~------------------ 246 (727)
T PRK11234 185 LIQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLE------------------ 246 (727)
T ss_pred eEeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHH------------------
Confidence 9999965333221222222 2222334557888999776 468999999 55 34432
Q ss_pred hhhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccc---cccCCCccchHHHHHHHHhCCCeEEEeCCC----
Q 004752 393 NSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTPF---- 465 (732)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~~l~~~Gwrsvy~~~~---- 465 (732)
.+ ||+.+++|||+++|++|+.+||+++|++..
T Consensus 247 -----------------------------------------~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~ 285 (727)
T PRK11234 247 -----------------------------------------DGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDE 285 (727)
T ss_pred -----------------------------------------hcCCCCcCCCcchHHHHHHHHHHHCCCEEEEcccccccc
Confidence 23 599999999999999999999999999821
Q ss_pred ------C-----------CeeEeccCCChHHHhhhhhccccC-cccccc
Q 004752 466 ------R-----------PQFLGTSTTNLNDLLIQGTRWGSG-LTDVGL 496 (732)
Q Consensus 466 ------~-----------~~~~g~aP~~l~~~~~Qr~RWa~G-~~qi~~ 496 (732)
+ ..+++..|+|+++.++||.||.+| .+|.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 286 AKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred cccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 1 347788999999999999999999 577764
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.96 E-value=2.7e-29 Score=259.91 Aligned_cols=230 Identities=23% Similarity=0.266 Sum_probs=179.3
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|.|+|+||+ |||+ +.+.+|+.|+++++||.++++|+|+|||++|.|.+.+.+.. .
T Consensus 1 p~vsIiIp~---~Ne~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~--------------~------- 55 (241)
T cd06427 1 PVYTILVPL---YKEA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR--------------L------- 55 (241)
T ss_pred CeEEEEEec---CCcH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc--------------c-------
Confidence 789999999 9998 88999999999999998899999999999997754321110 0
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
....++++
T Consensus 56 ------------------------------------------------------------------------~~~~~i~~ 63 (241)
T cd06427 56 ------------------------------------------------------------------------PSIFRVVV 63 (241)
T ss_pred ------------------------------------------------------------------------CCCeeEEE
Confidence 00012444
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 334 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 334 (732)
+...+ ..+|++|+|.|++. ++||||+++|+|++++ |+++.+++.+|.+. ++++++||++..+.|...+
T Consensus 64 ~~~~~-----~~G~~~a~n~g~~~----a~gd~i~~~DaD~~~~-~~~l~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~ 131 (241)
T cd06427 64 VPPSQ-----PRTKPKACNYALAF----ARGEYVVIYDAEDAPD-PDQLKKAVAAFARL--DDKLACVQAPLNYYNAREN 131 (241)
T ss_pred ecCCC-----CCchHHHHHHHHHh----cCCCEEEEEcCCCCCC-hHHHHHHHHHHHhc--CCCEEEEeCceEeeCCCcc
Confidence 43322 36899999999999 8999999999999987 99999999988631 2469999998877764221
Q ss_pred chHH----HHHHHHHHHHHHHHhhcCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCc
Q 004752 335 DIYD----GRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENF 409 (732)
Q Consensus 335 d~~~----~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (732)
... ......++...++....+... ++|++.++||+++..
T Consensus 132 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~----------------------------------- 175 (241)
T cd06427 132 -WLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLRE----------------------------------- 175 (241)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHHH-----------------------------------
Confidence 111 112233455556666665554 468888999999963
Q ss_pred hhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhcccc
Q 004752 410 SNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 489 (732)
Q Consensus 410 ~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 489 (732)
.+||+....+||++.++|++.+|||+.+++ ....+..|+|++++++||.||+.
T Consensus 176 ------------------------vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~---~~~~~~~~~~~~~~~~q~~Rw~~ 228 (241)
T cd06427 176 ------------------------LGGWDPFNVTEDADLGLRLARAGYRTGVLN---STTLEEANNALGNWIRQRSRWIK 228 (241)
T ss_pred ------------------------cCCCCcccchhhHHHHHHHHHCCceEEEec---ccccccCcHhHHHHHHHHHHHhc
Confidence 467887788999999999999999999996 34578899999999999999999
Q ss_pred Ccccccc
Q 004752 490 GLTDVGL 496 (732)
Q Consensus 490 G~~qi~~ 496 (732)
|.+|++.
T Consensus 229 g~~~~~~ 235 (241)
T cd06427 229 GYMQTWL 235 (241)
T ss_pred cHHHHHH
Confidence 9999986
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=3e-28 Score=249.92 Aligned_cols=229 Identities=23% Similarity=0.283 Sum_probs=172.9
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccc
Q 004752 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (732)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (732)
+|+||| |||+++.+.+++.|+.+++||. .+|+|+|||++|.|.....+. +|+++
T Consensus 1 siiip~---~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~---------~~~~~------------ 54 (236)
T cd06435 1 SIHVPC---YEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEA---------HCAQL------------ 54 (236)
T ss_pred CeeEee---CCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHH---------HHHHh------------
Confidence 589999 9999889999999999999996 899999999999764211110 00000
Q ss_pred cCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEec
Q 004752 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSR 257 (732)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~R 257 (732)
-+++.++..
T Consensus 55 -----------------------------------------------------------------------~~~i~~i~~ 63 (236)
T cd06435 55 -----------------------------------------------------------------------GERFRFFHV 63 (236)
T ss_pred -----------------------------------------------------------------------CCcEEEEEc
Confidence 013556655
Q ss_pred ccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchH
Q 004752 258 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 337 (732)
Q Consensus 258 ekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 337 (732)
+++ .++|+||+|.|++.+. .++|+|+++|+|.+++ |++|.+++..|.++ +++.|+++..+.+. ...++
T Consensus 64 ~~~----~G~~~~a~n~g~~~a~--~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~~~~~-~~~~~ 131 (236)
T cd06435 64 EPL----PGAKAGALNYALERTA--PDAEIIAVIDADYQVE-PDWLKRLVPIFDDP----RVGFVQAPQDYRDG-EESLF 131 (236)
T ss_pred CCC----CCCchHHHHHHHHhcC--CCCCEEEEEcCCCCcC-HHHHHHHHHHhcCC----CeeEEecCccccCC-CccHH
Confidence 543 4679999999999842 3589999999999987 99999999998765 58999988765542 12233
Q ss_pred HHHHH----HHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004752 338 DGRFR----SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 413 (732)
Q Consensus 338 ~~~~~----~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (732)
..... .++..........+..++.|+++++||+++..
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------------------------------- 172 (236)
T cd06435 132 KRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDD--------------------------------------- 172 (236)
T ss_pred HHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHHH---------------------------------------
Confidence 21111 11111122223333445688989999999962
Q ss_pred HHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCccc
Q 004752 414 QEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 493 (732)
Q Consensus 414 ~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~q 493 (732)
.+||+.+...||++++++++.+||++.|+++ +..+...|+++.++.+||.||++|++|
T Consensus 173 --------------------iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~q~~rw~~g~~~ 230 (236)
T cd06435 173 --------------------VGGWDEWCITEDSELGLRMHEAGYIGVYVAQ--SYGHGLIPDTFEAFKKQRFRWAYGAVQ 230 (236)
T ss_pred --------------------hCCCCCccccchHHHHHHHHHCCcEEEEcch--hhccCcCcccHHHHHHHHHHHhcchhh
Confidence 4579888889999999999999999999985 788899999999999999999999999
Q ss_pred ccc
Q 004752 494 VGL 496 (732)
Q Consensus 494 i~~ 496 (732)
++.
T Consensus 231 ~~~ 233 (236)
T cd06435 231 ILK 233 (236)
T ss_pred hhh
Confidence 986
No 25
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.95 E-value=2.2e-26 Score=254.14 Aligned_cols=228 Identities=15% Similarity=0.153 Sum_probs=167.8
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccC
Q 004752 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTIC 171 (732)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~ 171 (732)
+..|+|+|+||+ |||+ +.+.+|+.|+++||||. +||+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~---~nee-~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPL---HGDE-PELYENLASFCRQDYPG--FQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEEC---CCCC-hhHHHHHHHHHhcCCCC--eEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 447999999999 9999 67899999999999997 9999999999987654222110
Q ss_pred cccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCc
Q 004752 172 PQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPL 251 (732)
Q Consensus 172 p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~ 251 (732)
+. || -.+
T Consensus 93 ---------------------------~~----------------------~p------------------------~~~ 99 (373)
T TIGR03472 93 ---------------------------AD----------------------FP------------------------DAD 99 (373)
T ss_pred ---------------------------Hh----------------------CC------------------------CCc
Confidence 00 00 013
Q ss_pred EEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccC
Q 004752 252 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNI 331 (732)
Q Consensus 252 l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~ 331 (732)
++++..++++| .++|++|+|++++. ++||+++++|||.+++ ||+|++++..|.||+ ++.|+++....+
T Consensus 100 i~~v~~~~~~G--~~~K~~~l~~~~~~----a~ge~i~~~DaD~~~~-p~~L~~lv~~~~~~~----v~~V~~~~~~~~- 167 (373)
T TIGR03472 100 IDLVIDARRHG--PNRKVSNLINMLPH----ARHDILVIADSDISVG-PDYLRQVVAPLADPD----VGLVTCLYRGRP- 167 (373)
T ss_pred eEEEECCCCCC--CChHHHHHHHHHHh----ccCCEEEEECCCCCcC-hhHHHHHHHHhcCCC----cceEeccccCCC-
Confidence 56665544433 46799999999998 8999999999999997 999999999998764 889988643222
Q ss_pred CCCchHHHHHHH-----HHHHHHHHHhhcCC-ccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCC
Q 004752 332 NKYDIYDGRFRS-----AYCVQWQGMDGLKG-PVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 405 (732)
Q Consensus 332 ~~~d~~~~~~~~-----f~~~~~~g~d~~~~-~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (732)
.++.+..-... |+...... +..+. .++.|++.++||+++++
T Consensus 168 -~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~~------------------------------- 214 (373)
T TIGR03472 168 -VPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLEA------------------------------- 214 (373)
T ss_pred -CCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHHH-------------------------------
Confidence 22222211111 11111111 22232 34679999999999963
Q ss_pred CCCchhhHHHhhccccccceeccccccccccccC--CCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhh
Q 004752 406 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQ 483 (732)
Q Consensus 406 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Q 483 (732)
.+||+. ++++||++++.++.++||++.|++. +......|+|++++++|
T Consensus 215 ----------------------------iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~--~v~~~~~~~s~~~~~~q 264 (373)
T TIGR03472 215 ----------------------------IGGLAALAHHLADDYWLGELVRALGLRVVLAPV--VVDTDVHETSFATLLAH 264 (373)
T ss_pred ----------------------------cCChHHhcccchHHHHHHHHHHHcCCeEEecch--hhhcCCCccCHHHHHHH
Confidence 467874 5789999999999999999999864 77778888999999999
Q ss_pred hhccccCcc
Q 004752 484 GTRWGSGLT 492 (732)
Q Consensus 484 r~RWa~G~~ 492 (732)
|.||++..-
T Consensus 265 ~~RW~r~~~ 273 (373)
T TIGR03472 265 ELRWSRTIR 273 (373)
T ss_pred HHHHHhhhh
Confidence 999986554
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=5e-29 Score=254.04 Aligned_cols=224 Identities=26% Similarity=0.297 Sum_probs=144.2
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|+|+|+||+ |||+ +.+.++|.|+++++||. ++|+|+||++++.|.+.+.+.+ .++
T Consensus 1 P~v~Vvip~---~~~~-~~l~~~l~sl~~~~~~~--~~v~vvd~~~~~~~~~~~~~~~----------~~~--------- 55 (228)
T PF13641_consen 1 PRVSVVIPA---YNED-DVLRRCLESLLAQDYPR--LEVVVVDDGSDDETAEILRALA----------ARY--------- 55 (228)
T ss_dssp --EEEE--B---SS-H-HHHHHHHHHHTTSHHHT--EEEEEEEE-SSS-GCTTHHHHH----------HTT---------
T ss_pred CEEEEEEEe---cCCH-HHHHHHHHHHHcCCCCC--eEEEEEECCCChHHHHHHHHHH----------HHc---------
Confidence 789999999 9998 68999999999999965 9999999999986654332211 000
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
| --++.+
T Consensus 56 -------------------------------------------------~------------------------~~~v~v 62 (228)
T PF13641_consen 56 -------------------------------------------------P------------------------RVRVRV 62 (228)
T ss_dssp -------------------------------------------------G------------------------G-GEEE
T ss_pred -------------------------------------------------C------------------------CCceEE
Confidence 0 003567
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKY 334 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~ 334 (732)
+.++++++ ..+|++|+|.+++. +++|+|+++|+|++++ |++|++++.+|.+| ++++||++..+++. .
T Consensus 63 i~~~~~~g--~~~k~~a~n~~~~~----~~~d~i~~lD~D~~~~-p~~l~~~~~~~~~~----~~~~v~~~~~~~~~--~ 129 (228)
T PF13641_consen 63 IRRPRNPG--PGGKARALNEALAA----ARGDYILFLDDDTVLD-PDWLERLLAAFADP----GVGAVGGPVFPDND--R 129 (228)
T ss_dssp EE----HH--HHHHHHHHHHHHHH-------SEEEEE-SSEEE--CHHHHHHHHHHHBS----S--EEEEEEEETTC--C
T ss_pred eecCCCCC--cchHHHHHHHHHHh----cCCCEEEEECCCcEEC-HHHHHHHHHHHHhC----CCCeEeeeEeecCC--C
Confidence 77655432 24799999999999 8899999999999996 99999999999666 49999988866542 1
Q ss_pred chHHHHHHHHH----HHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCch
Q 004752 335 DIYDGRFRSAY----CVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 410 (732)
Q Consensus 335 d~~~~~~~~f~----~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (732)
..+......++ .....+....+..+++|+++++||+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~~------------------------------------ 173 (228)
T PF13641_consen 130 NWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALEE------------------------------------ 173 (228)
T ss_dssp CEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHHH------------------------------------
T ss_pred CHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHHH------------------------------------
Confidence 11111111111 01122334445566789999999999952
Q ss_pred hhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 411 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 411 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
.+||++....||.++++++.++||++.|++. +.+....|.+++++.+||.||++|
T Consensus 174 -----------------------~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~--~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 174 -----------------------VGGFDPFILGEDFDLCLRLRAAGWRIVYAPD--ALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp -----------------------H-S--SSSSSHHHHHHHHHHHTT--EEEEEE--EEEEE--SSSTHHHHHHHHHHH--
T ss_pred -----------------------hCCCCCCCcccHHHHHHHHHHCCCcEEEECC--cEEEEeCCCCHHHHHHHHhccCcC
Confidence 4578888889999999999999999999985 889999999999999999999987
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=8.3e-27 Score=242.63 Aligned_cols=172 Identities=17% Similarity=0.025 Sum_probs=115.8
Q ss_pred HHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCCCchHHHHHHHHH----
Q 004752 271 ALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAY---- 345 (732)
Q Consensus 271 aLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~---- 345 (732)
++|.++.. +++|||+++|||++++ |++|++++.+|. || ++|.|++.+...|.. ...+..-+..-|
T Consensus 64 ~~~~~~~~----a~~e~i~~~DaD~~~~-~~~l~~l~~~~~~~p----~vg~v~g~~~~~~~~-~~~~~~~q~~ey~~~~ 133 (244)
T cd04190 64 YFCRVLFP----DDPEFILLVDADTKFD-PDSIVQLYKAMDKDP----EIGGVCGEIHPMGKK-QGPLVMYQVFEYAISH 133 (244)
T ss_pred HHHHHhhc----CCCCEEEEECCCCcCC-HhHHHHHHHHHHhCC----CEEEEEeeeEEcCCc-chhHHHhHheehhhhh
Confidence 45666665 8999999999999997 999999999884 66 589999987776542 122222111111
Q ss_pred HHHHHHHhhcCCc-cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccc
Q 004752 346 CVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCS 424 (732)
Q Consensus 346 ~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ 424 (732)
.....+....+.. .+.|++++||++++.+.+.. + . .+..+.
T Consensus 134 ~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~------~---~-----------------------------~~~~~~ 175 (244)
T cd04190 134 WLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGG------K---G-----------------------------PLLDYA 175 (244)
T ss_pred hhcccHHHcCCceEECCCceEEEEehhhcCCccc------c---c-----------------------------cchhhc
Confidence 1112233334443 45799999999999751100 0 0 000001
Q ss_pred eeccccccccccccCCCccchHHHHHHHHhCCCeEEE--eCCCCCeeEeccCCChHHHhhhhhccccCccc
Q 004752 425 YEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY--LTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTD 493 (732)
Q Consensus 425 ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy--~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~q 493 (732)
|.+.+.- ...+....+++||.+++++|..+||++.| +++ +.+++++|+|++++++||.||++|++.
T Consensus 176 ~~~~~~~-~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~--a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 176 YLTNTVD-SLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPG--AVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred cccCccc-chHHHHHHhHhcccceeHHHhccCCccEEEEecc--cEEEEECCCCHHHHHHHhHhhhccccc
Confidence 1111100 01123345789999999999999999999 874 999999999999999999999999874
No 28
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.93 E-value=1.6e-25 Score=224.52 Aligned_cols=191 Identities=16% Similarity=0.189 Sum_probs=154.3
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|.|+|+||+ |||+ ..+.++|.|+++++||. ++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~---~n~~-~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPL---CGVD-PNLYENLESFFQQDYPK--YEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEec---CCCC-ccHHHHHHHHHhccCCC--eEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 789999999 9998 56899999999999997 99999999999977643322110 0
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC--cE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP--LL 252 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p--~l 252 (732)
+| .+
T Consensus 55 --------------------------------------------------------------------------~~~~~~ 60 (196)
T cd02520 55 --------------------------------------------------------------------------YPNVDA 60 (196)
T ss_pred --------------------------------------------------------------------------CCCCcE
Confidence 01 23
Q ss_pred EEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCC
Q 004752 253 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 332 (732)
Q Consensus 253 ~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 332 (732)
.++..+++.| ..+|++|+|.+++. ++||+++++|+|+.++ |++|.+++..+.+|+ ++.|++.
T Consensus 61 ~~~~~~~~~g--~~~~~~~~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~------- 122 (196)
T cd02520 61 RLLIGGEKVG--INPKVNNLIKGYEE----ARYDILVISDSDISVP-PDYLRRMVAPLMDPG----VGLVTCL------- 122 (196)
T ss_pred EEEecCCcCC--CCHhHHHHHHHHHh----CCCCEEEEECCCceEC-hhHHHHHHHHhhCCC----CCeEEee-------
Confidence 4554433322 34699999999999 8999999999999987 999999999887664 7777653
Q ss_pred CCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhh
Q 004752 333 KYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 412 (732)
Q Consensus 333 ~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (732)
+..|+++++||+++..
T Consensus 123 --------------------------~~~g~~~~~r~~~~~~-------------------------------------- 138 (196)
T cd02520 123 --------------------------CAFGKSMALRREVLDA-------------------------------------- 138 (196)
T ss_pred --------------------------cccCceeeeEHHHHHh--------------------------------------
Confidence 4678999999999852
Q ss_pred HHHhhccccccceeccccccccccccC--CCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 413 LQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 413 ~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
.+||+. ..+.||++.++++..+||++.|+++ +.++...|.+++++++||.||++.
T Consensus 139 ---------------------~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~--~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 139 ---------------------IGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPY--VVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred ---------------------ccChHHHhHHHHHHHHHHHHHHHcCCeEEEcch--heeccCCcccHHHHHHHHHHHhcc
Confidence 356754 3568999999999999999999975 889999999999999999999874
No 29
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=4.7e-23 Score=239.91 Aligned_cols=236 Identities=18% Similarity=0.195 Sum_probs=168.7
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEE---EcCCCCccchHhHHHHHHhhhcchhhhhhcC
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAM-ALDYPVDKLHVYL---SDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~-~~dYP~~kl~v~v---~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~ 166 (732)
+.+.|.|+|+||+ |||+ +++.+||.+++ ++|||. ++|+| .|||.+ .+++.+.+
T Consensus 67 ~~~~~~vsIlVPa---~nE~-~VI~~~v~~ll~~ldYp~--~~I~v~~~~nD~~T---~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPA---WKEY-DVIAKMIENMLATLDYRR--YVIFVGTYPNDAET---ITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeC---CCcH-HHHHHHHHHHHhcCCCCC--eEEEEEecCCCccH---HHHHHHHh--------------
Confidence 4567999999999 9999 99999999986 899995 88999 477744 32221110
Q ss_pred ccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccc
Q 004752 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADL 246 (732)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 246 (732)
T Consensus 124 -------------------------------------------------------------------------------- 123 (703)
T PRK15489 124 -------------------------------------------------------------------------------- 123 (703)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcCcEEEEecccCCCCCCCChHHHHHHHHHhc--C-CCCCCCE--EEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEE
Q 004752 247 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVS--G-VISNSPY--ILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAF 321 (732)
Q Consensus 247 ~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s--~-~~s~ge~--Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~ 321 (732)
..+|+++-|..++ ++ ..+||.|||.++... . ....++| |+++|||.+++ |+.|+.. .++.+.. .+
T Consensus 124 ~~~p~~~~v~~~~-~g--p~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~-P~~L~~~-~~~~~~~-----~~ 193 (703)
T PRK15489 124 RRYKRLVRVEVPH-DG--PTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLH-PLELKYF-NYLLPRK-----DL 193 (703)
T ss_pred ccCCcEEEEEcCC-CC--CCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCC-hhHHHHH-HhhcCCc-----ce
Confidence 0124455554432 22 478999999999762 0 0113444 99999999987 9999754 6665331 36
Q ss_pred EccCcccccCCCCch----HHHHHHHHHHHHHHHHhhcCCcc-ceeccEEEechhccccccchhhhhccCCchhhhhhhh
Q 004752 322 VQFPQKFHNINKYDI----YDGRFRSAYCVQWQGMDGLKGPV-LSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLH 396 (732)
Q Consensus 322 VQ~Pq~f~n~~~~d~----~~~~~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~ 396 (732)
||.|-.-...+.... |..+....++..+.++...++++ ..|+|+.|||++|..
T Consensus 194 iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~---------------------- 251 (703)
T PRK15489 194 VQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLA---------------------- 251 (703)
T ss_pred eeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHH----------------------
Confidence 898742111112222 33455556677788999998886 478999999999852
Q ss_pred hhhcccCCCCCCchhhHHHhhccccccceeccccccccc---cccCCCccchHHHHHHHHhCCCeEEEeCC---------
Q 004752 397 QSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEV---GILYQSVSEDLFTGFILHCKGWTSTYLTP--------- 464 (732)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~---G~~~~svtED~~t~~~l~~~Gwrsvy~~~--------- 464 (732)
++ +++ ||+.+|+|||+++|+||+++|||+.|+.-
T Consensus 252 ----------------l~------------------~~gg~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~ 297 (703)
T PRK15489 252 ----------------LM------------------KERGNQPFNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRT 297 (703)
T ss_pred ----------------HH------------------HhcCCCCCCCCCchHhHHHHHHHHHCCCceEEEEEecccccccc
Confidence 00 123 58889999999999999999999999321
Q ss_pred ------------CCCeeEeccCCChHHHhhhhhccccCcc-ccc
Q 004752 465 ------------FRPQFLGTSTTNLNDLLIQGTRWGSGLT-DVG 495 (732)
Q Consensus 465 ------------~~~~~~g~aP~~l~~~~~Qr~RWa~G~~-qi~ 495 (732)
...+.++..|.++++.++||.||-.|-. |-.
T Consensus 298 ~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 298 SWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred ccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 1256678899999999999999999987 654
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.93 E-value=1.5e-24 Score=219.91 Aligned_cols=221 Identities=20% Similarity=0.219 Sum_probs=165.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||| |||+ +.+.+||.|++.++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 viip~---~n~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~-------------------------- 50 (229)
T cd04192 1 VVIAA---RNEA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAA-------------------------- 50 (229)
T ss_pred CEEEe---cCcH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHH--------------------------
Confidence 68999 9998 88999999999999999899999999999997754322000
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
....+++.++.++
T Consensus 51 -------------------------------------------------------------------~~~~~~v~~~~~~ 63 (229)
T cd04192 51 -------------------------------------------------------------------AKPNFQLKILNNS 63 (229)
T ss_pred -------------------------------------------------------------------hCCCcceEEeecc
Confidence 0011345666544
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 338 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 338 (732)
. + ...+|+.++|.+++. +++|+|+++|+|+++. |++|++++..+.++. .+.|+++..+.. .+.+.
T Consensus 64 ~-~--~~~g~~~a~n~g~~~----~~~d~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~v~~~~~~~~---~~~~~ 128 (229)
T cd04192 64 R-V--SISGKKNALTTAIKA----AKGDWIVTTDADCVVP-SNWLLTFVAFIQKEQ----IGLVAGPVIYFK---GKSLL 128 (229)
T ss_pred C-c--ccchhHHHHHHHHHH----hcCCEEEEECCCcccC-HHHHHHHHHHhhcCC----CcEEeeeeeecC---CccHH
Confidence 2 1 257999999999999 8899999999999997 999999999876543 567777776552 12221
Q ss_pred HHHHH----HHHHHHHHHhhcCCc-cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004752 339 GRFRS----AYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 413 (732)
Q Consensus 339 ~~~~~----f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (732)
..... +......+..+++.+ .++|++.++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~--------------------------------------- 169 (229)
T cd04192 129 AKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFFE--------------------------------------- 169 (229)
T ss_pred HHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHHH---------------------------------------
Confidence 11111 111222233344444 4578889999999862
Q ss_pred HHhhccccccceeccccccccccccC--CCccchHHHHHHHHhCCC-eEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 414 QEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGW-TSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 414 ~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~~l~~~Gw-rsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
.+||++ ...+||.+..+++.++|| ++.|++..........|.+++++++||+||++|
T Consensus 170 --------------------~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 170 --------------------VGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred --------------------hcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 467874 467899999999999999 999986545788899999999999999999998
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.92 E-value=4.7e-24 Score=218.15 Aligned_cols=229 Identities=17% Similarity=0.130 Sum_probs=163.4
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccc
Q 004752 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (732)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (732)
+|+|+||| |||+++.+.+|+.++.+++ | .+|+|+|||++|.|.+.+.+..
T Consensus 1 ~isVvIp~---~ne~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPV---YDEDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEee---cCCChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 58999999 9999889999999999999 4 6899999999986543221100
Q ss_pred cccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEE
Q 004752 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYV 255 (732)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv 255 (732)
..+.+.++
T Consensus 51 ------------------------------------------------------------------------~~~~~~v~ 58 (235)
T cd06434 51 ------------------------------------------------------------------------KYGGIFVI 58 (235)
T ss_pred ------------------------------------------------------------------------cCCcEEEE
Confidence 01233344
Q ss_pred ecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCc
Q 004752 256 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 335 (732)
Q Consensus 256 ~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 335 (732)
. ++ +++|++|+|.+++. +++|+|+++|+|.++. |++|++++..|.|+ +++.|++.+...+.+ ..
T Consensus 59 ~-~~-----~~g~~~a~n~g~~~----a~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~----~v~~v~~~~~~~~~~-~~ 122 (235)
T cd06434 59 T-VP-----HPGKRRALAEGIRH----VTTDIVVLLDSDTVWP-PNALPEMLKPFEDP----KVGGVGTNQRILRPR-DS 122 (235)
T ss_pred e-cC-----CCChHHHHHHHHHH----hCCCEEEEECCCceeC-hhHHHHHHHhccCC----CEeEEcCceEeecCc-cc
Confidence 3 33 47899999999999 8999999999999998 99999999998765 499999888777542 12
Q ss_pred hHHHHHHHHHHH----HHHHHhhcCCc-cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCch
Q 004752 336 IYDGRFRSAYCV----QWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS 410 (732)
Q Consensus 336 ~~~~~~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (732)
.+......++.. ........++. .+.|...++||+++...+...++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~--------------------------- 175 (235)
T cd06434 123 KWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLEEFTN--------------------------- 175 (235)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHHHhhh---------------------------
Confidence 222211122221 11222333333 3457777899999864110000000
Q ss_pred hhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 411 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 411 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
+.++.......||.+++.+++++||+.+|++. +.+....|.++.++++||.||++|
T Consensus 176 ----------------------~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~q~~Rw~~~ 231 (235)
T cd06434 176 ----------------------ETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYT--SEAYTETPENYKKFLKQQLRWSRS 231 (235)
T ss_pred ----------------------hhhcCCCCCcCchHHHHHHHHHCCCeEEEecC--CeEEEEcchhHHHHHHHhhhhhhc
Confidence 01221224678999999999999999999985 788888999999999999999999
Q ss_pred ccc
Q 004752 491 LTD 493 (732)
Q Consensus 491 ~~q 493 (732)
..+
T Consensus 232 ~~~ 234 (235)
T cd06434 232 NWR 234 (235)
T ss_pred ccC
Confidence 864
No 32
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.92 E-value=1.7e-23 Score=216.71 Aligned_cols=228 Identities=18% Similarity=0.202 Sum_probs=168.0
Q ss_pred CCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCc
Q 004752 88 LPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGI 167 (732)
Q Consensus 88 l~~~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v 167 (732)
++..+..|.|+|+||+ |||+ ..+.+++.++.+++||.++++|+|+|||++|.|.+.+.+-
T Consensus 22 ~~~~~~~~~isVvip~---~n~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~---------------- 81 (251)
T cd06439 22 LPDPAYLPTVTIIIPA---YNEE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREY---------------- 81 (251)
T ss_pred CCCCCCCCEEEEEEec---CCcH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHH----------------
Confidence 3446678999999999 9998 7899999999999999888999999999999765322110
Q ss_pred cccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhcccc
Q 004752 168 KTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLV 247 (732)
Q Consensus 168 ~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~ 247 (732)
.+
T Consensus 82 ----------------------------------~~-------------------------------------------- 83 (251)
T cd06439 82 ----------------------------------AD-------------------------------------------- 83 (251)
T ss_pred ----------------------------------hh--------------------------------------------
Confidence 00
Q ss_pred CcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcc
Q 004752 248 EMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQK 327 (732)
Q Consensus 248 ~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~ 327 (732)
. ++.++..++ +.+|++|+|.+++. +++|+|+++|+|++++ |+++.+++..+.++ +++.|++...
T Consensus 84 ~--~v~~i~~~~-----~~g~~~a~n~gi~~----a~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~~~~~ 147 (251)
T cd06439 84 K--GVKLLRFPE-----RRGKAAALNRALAL----ATGEIVVFTDANALLD-PDALRLLVRHFADP----SVGAVSGELV 147 (251)
T ss_pred C--cEEEEEcCC-----CCChHHHHHHHHHH----cCCCEEEEEccccCcC-HHHHHHHHHHhcCC----CccEEEeEEE
Confidence 0 244554443 46899999999999 8899999999999998 99999999998765 4788887666
Q ss_pred cccCCCCchHHHH-HHHHHHHHHHHHhhcCCc-cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCC
Q 004752 328 FHNINKYDIYDGR-FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 405 (732)
Q Consensus 328 f~n~~~~d~~~~~-~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (732)
..+.+. ...... ...+...........+.. ...|++..+||+++.
T Consensus 148 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-------------------------------- 194 (251)
T cd06439 148 IVDGGG-SGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR-------------------------------- 194 (251)
T ss_pred ecCCcc-cchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc--------------------------------
Confidence 554321 011111 111111111112222222 234455558888773
Q ss_pred CCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhh
Q 004752 406 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGT 485 (732)
Q Consensus 406 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~ 485 (732)
|++.....||.++++++..+||++.|+++ +..+...|.+.+++++|+.
T Consensus 195 ------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 242 (251)
T cd06439 195 ------------------------------PLPADTINDDFVLPLRIARQGYRVVYEPD--AVAYEEVAEDGSEEFRRRV 242 (251)
T ss_pred ------------------------------CCCcccchhHHHHHHHHHHcCCeEEeccc--cEEEEeCcccHHHHHHHHH
Confidence 44555668999999999999999999985 8899999999999999999
Q ss_pred ccccCcccc
Q 004752 486 RWGSGLTDV 494 (732)
Q Consensus 486 RWa~G~~qi 494 (732)
||+.|++|.
T Consensus 243 r~~~g~~~~ 251 (251)
T cd06439 243 RIAAGNLQA 251 (251)
T ss_pred HHHhccccC
Confidence 999999984
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.91 E-value=5.9e-22 Score=219.82 Aligned_cols=230 Identities=19% Similarity=0.122 Sum_probs=157.9
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
++..|+|+|+||+ |||+ +.+.+++.|+++++||. +++|+|+|||++|.|.+.+.+..+ +
T Consensus 36 ~~~~p~VSVIIpa---~Ne~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------~------ 94 (384)
T TIGR03469 36 PEAWPAVVAVVPA---RNEA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------A------ 94 (384)
T ss_pred CCCCCCEEEEEec---CCcH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH----------h------
Confidence 4678999999999 9998 88999999999999995 499999999999987643322110 0
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
+ ...+
T Consensus 95 ----------------------------------------------------~-----------------------~~~~ 99 (384)
T TIGR03469 95 ----------------------------------------------------Y-----------------------GRGD 99 (384)
T ss_pred ----------------------------------------------------c-----------------------CCCC
Confidence 0 0002
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCC-----CCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccC
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISN-----SPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 325 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~-----ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 325 (732)
++.++..+.+|. ...+|+.|+|.+++. ++ +|+++++|||+.++ |+++++++..+.+++ ++.|...
T Consensus 100 ~i~vi~~~~~~~-g~~Gk~~A~n~g~~~----A~~~~~~gd~llflDaD~~~~-p~~l~~lv~~~~~~~----~~~vs~~ 169 (384)
T TIGR03469 100 RLTVVSGQPLPP-GWSGKLWAVSQGIAA----ARTLAPPADYLLLTDADIAHG-PDNLARLVARARAEG----LDLVSLM 169 (384)
T ss_pred cEEEecCCCCCC-CCcchHHHHHHHHHH----HhccCCCCCEEEEECCCCCCC-hhHHHHHHHHHHhCC----CCEEEec
Confidence 455665433321 146899999999998 66 99999999999987 999999999887653 3445433
Q ss_pred cccccCCCCchHHHHH----HHHHHHHH---HHHhhcC-CccceeccEEEechhccccccchhhhhccCCchhhhhhhhh
Q 004752 326 QKFHNINKYDIYDGRF----RSAYCVQW---QGMDGLK-GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQ 397 (732)
Q Consensus 326 q~f~n~~~~d~~~~~~----~~f~~~~~---~g~d~~~-~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (732)
.++.. .+.+.+.. ..++.... ...+... .....|.+.++||+++++
T Consensus 170 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~----------------------- 223 (384)
T TIGR03469 170 VRLRC---ESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALER----------------------- 223 (384)
T ss_pred ccccC---CCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHHH-----------------------
Confidence 33221 12222111 11111110 0111111 123468888999999963
Q ss_pred hhcccCCCCCCchhhHHHhhccccccceeccccccccccccC--CCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCC
Q 004752 398 SYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT 475 (732)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~ 475 (732)
.+||+. ..+.||++++.++.++|+++.+... ........-+
T Consensus 224 ------------------------------------vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~-~~~~s~r~~~ 266 (384)
T TIGR03469 224 ------------------------------------IGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLA-ARTRSLRPYD 266 (384)
T ss_pred ------------------------------------cCCHHHHhhCcccHHHHHHHHHHcCCcEEEEec-CceEEEEecC
Confidence 467764 4689999999999999999999865 2333334556
Q ss_pred ChHHHhhhhhcccc
Q 004752 476 NLNDLLIQGTRWGS 489 (732)
Q Consensus 476 ~l~~~~~Qr~RWa~ 489 (732)
++.+.++|+.||+.
T Consensus 267 ~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 267 GLGEIWRMIARTAY 280 (384)
T ss_pred CHHHHHHHHHHhHH
Confidence 89999999999843
No 34
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=5.5e-20 Score=200.24 Aligned_cols=343 Identities=17% Similarity=0.152 Sum_probs=223.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCchhHHHHHHHHHHHHHH----HHHHHH-HHhhheeecccc--CCCC-CCCC
Q 004752 19 INRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLL----SFIWLL-GRAYLWRPVSRT--VFPE-RLPE 90 (732)
Q Consensus 19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~----~~~~~l-~~~~~~~p~~r~--~~~~-~l~~ 90 (732)
+.|++.+...++....-.|-....++.......=..++.+++-++. +|.-.+ +.+....--+|. ..|+ ++|
T Consensus 63 lRR~~L~~~tla~tv~at~~m~~vl~~gG~~~le~~iL~Lfa~lFcwvs~~F~tAl~GF~~L~~~~~r~~~~~p~~p~p- 141 (736)
T COG2943 63 LRRYILLGLTLAQTVVATWYMKTVLPYGGPYMLEAGILVLFAVLFCWVSAGFWTALMGFLVLLFGRDRYLSIAPNEPLP- 141 (736)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeecCCCcCCCCCCCCCC-
Confidence 6777777777777666666666666543322111222222222221 111111 111111111111 1111 122
Q ss_pred CCCCCceEEEEecCCCCCCchHHHH----HHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcC
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVM----NTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYG 166 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~----~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~ 166 (732)
++-+-.|++|+ |||++.-|- .|.+|+.+.. -.+.+.++|+.|..+++- ++.|.. .|..+|++.+
T Consensus 142 --~~hrTAilmPi---ynEd~~rVfAgLrA~~eSla~Tg-~~~~FD~FVLSDs~dpdi--alAEq~----a~~~l~~e~~ 209 (736)
T COG2943 142 --DLHRTAILMPI---YNEDVNRVFAGLRATYESLAATG-HAEHFDFFVLSDSRDPDI--ALAEQK----AWAELCRELG 209 (736)
T ss_pred --cccceeEEeec---cccCHHHHHHHHHHHHHHHHhhC-CcccceEEEEcCCCCchh--hhhHHH----HHHHHHHHhC
Confidence 23357899999 999987654 4445554444 345799999999998731 233332 2333444322
Q ss_pred ccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccc
Q 004752 167 IKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADL 246 (732)
Q Consensus 167 v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 246 (732)
=
T Consensus 210 g------------------------------------------------------------------------------- 210 (736)
T COG2943 210 G------------------------------------------------------------------------------- 210 (736)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCc
Q 004752 247 VEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQ 326 (732)
Q Consensus 247 ~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq 326 (732)
.-++-|-.|.+| .+.||||+....|..| +.+++++++|||++.. +|.+-+++..|. .+++.|.+||-.
T Consensus 211 --~~~ifYRrRr~n----~~RKaGNIaDfcrRwG--~~Y~~MlVLDADSvMt-gd~lvrLv~~ME---~~P~aGlIQt~P 278 (736)
T COG2943 211 --EGNIFYRRRRRN----VKRKAGNIADFCRRWG--SAYSYMLVLDADSVMT-GDCLVRLVRLME---ANPDAGLIQTSP 278 (736)
T ss_pred --CCceeeehHhhh----hcccccCHHHHHHHhC--cccceEEEeecccccC-chHHHHHHHHHh---hCCCCceeecch
Confidence 013555444333 6789999999999998 8999999999999998 999999999886 345699999977
Q ss_pred ccccCCCCchHHHHHH----HHHHHHHHHHhhcCCc--cceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhc
Q 004752 327 KFHNINKYDIYDGRFR----SAYCVQWQGMDGLKGP--VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 400 (732)
Q Consensus 327 ~f~n~~~~d~~~~~~~----~f~~~~~~g~d~~~~~--~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (732)
.-.|. ...|...+. ++=.+...|...|++. -|-|.|+++|.++..+
T Consensus 279 ~~~gg--~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~-------------------------- 330 (736)
T COG2943 279 KASGG--DTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIE-------------------------- 330 (736)
T ss_pred hhcCc--chHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHH--------------------------
Confidence 66653 345554332 2223566789998874 6899999999999865
Q ss_pred ccCCCCCCchhhHHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHH
Q 004752 401 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDL 480 (732)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~ 480 (732)
+|....-. ..+.|.+..++.|+..+-.|.+.||.+-..+ +-.-++++.|.|+.++
T Consensus 331 ---------------------hcgLp~Lp---G~~pFgG~ilSHDfvEAALmRRaGW~v~ia~-dL~GSyEE~PpnLlD~ 385 (736)
T COG2943 331 ---------------------HCGLPPLP---GRGPFGGHILSHDFVEAALMRRAGWGVWIAY-DLDGSYEELPPNLLDE 385 (736)
T ss_pred ---------------------hcCCCCCC---CCCCCCccccchHHHHHHHHhhcCceEEEec-cCCCchhhCCchHHHH
Confidence 12221100 1234777889999999999999999876554 3578999999999999
Q ss_pred hhhhhccccCcccccccccCccccCCCCCChhhHHHHHHHhHhh
Q 004752 481 LIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFP 524 (732)
Q Consensus 481 ~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~ 524 (732)
+++-.||++|++|.+. ++. .+++.+..|+.+....+.+
T Consensus 386 l~RDRRWC~GNLqh~r-----l~~-~~GlHwvsR~h~~tGVmsY 423 (736)
T COG2943 386 LKRDRRWCHGNLQHFR-----LFL-VKGLHWVSRAHFLTGVMSY 423 (736)
T ss_pred HhhhhHhhhcchhhce-----eec-cCCccHHHHHHHHHHHHHH
Confidence 9999999999999763 333 4899999998877665544
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.86 E-value=1e-20 Score=194.28 Aligned_cols=224 Identities=16% Similarity=0.098 Sum_probs=161.3
Q ss_pred ceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccc
Q 004752 96 AIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAY 175 (732)
Q Consensus 96 ~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~y 175 (732)
+++|+||+ |||+ +.+.+++.++.+++||..+.+|+|+|||++|.|.+.+.+..
T Consensus 1 ~~sIiip~---~n~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPV---RNEE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEc---CCch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 48999999 9998 77899999999999997789999999999996643221100
Q ss_pred cccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEE
Q 004752 176 FSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYV 255 (732)
Q Consensus 176 f~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv 255 (732)
...|.+.++
T Consensus 54 -----------------------------------------------------------------------~~~~~v~~i 62 (249)
T cd02525 54 -----------------------------------------------------------------------AKDPRIRLI 62 (249)
T ss_pred -----------------------------------------------------------------------hcCCeEEEE
Confidence 012356676
Q ss_pred ecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCc
Q 004752 256 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYD 335 (732)
Q Consensus 256 ~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d 335 (732)
..+ .+++++|+|.+++. +++|+++++|+|.++. |++|.+++..+.+++ ...|+++....+ .+
T Consensus 63 ~~~------~~~~~~a~N~g~~~----a~~d~v~~lD~D~~~~-~~~l~~~~~~~~~~~----~~~v~~~~~~~~---~~ 124 (249)
T cd02525 63 DNP------KRIQSAGLNIGIRN----SRGDIIIRVDAHAVYP-KDYILELVEALKRTG----ADNVGGPMETIG---ES 124 (249)
T ss_pred eCC------CCCchHHHHHHHHH----hCCCEEEEECCCccCC-HHHHHHHHHHHhcCC----CCEEecceecCC---CC
Confidence 532 35689999999999 8999999999999986 999999998887653 444554432222 12
Q ss_pred hHHHHHHHHHHH-HHHH---HhhcC---CccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCC
Q 004752 336 IYDGRFRSAYCV-QWQG---MDGLK---GPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGEN 408 (732)
Q Consensus 336 ~~~~~~~~f~~~-~~~g---~d~~~---~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (732)
.+.......+.. ...+ ..... .....|.+.++||+++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 170 (249)
T cd02525 125 KFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVFEK---------------------------------- 170 (249)
T ss_pred hHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHHHH----------------------------------
Confidence 222111111110 0001 11111 224567778899988852
Q ss_pred chhhHHHhhccccccceeccccccccccccCC-CccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhcc
Q 004752 409 FSNVLQEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRW 487 (732)
Q Consensus 409 ~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RW 487 (732)
.+||+.. ...||.+.+++++++|+++.|+++ +......|.+++++.+|+.||
T Consensus 171 -------------------------~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~--~~~~~~~~~s~~~~~~~~~r~ 223 (249)
T cd02525 171 -------------------------VGGFDESLVRNEDAELNYRLRKAGYKIWLSPD--IRVYYYPRSTLKKLARQYFRY 223 (249)
T ss_pred -------------------------hCCCCcccCccchhHHHHHHHHcCcEEEEcCC--eEEEEcCCCCHHHHHHHHHHH
Confidence 2345544 347999999999999999999985 788888999999999999999
Q ss_pred ccCcccccc
Q 004752 488 GSGLTDVGL 496 (732)
Q Consensus 488 a~G~~qi~~ 496 (732)
+.|..|...
T Consensus 224 ~~~~~~~~~ 232 (249)
T cd02525 224 GKWRARTLR 232 (249)
T ss_pred hhhhHHHHH
Confidence 999999886
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.81 E-value=1.8e-19 Score=178.49 Aligned_cols=162 Identities=20% Similarity=0.159 Sum_probs=114.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+|+.++++++||.++++|+|+|||++|.|.+.+. +++
T Consensus 1 VvIp~---~ne~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~--------------~~~------------ 50 (183)
T cd06438 1 ILIPA---HNEE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVAR--------------AAG------------ 50 (183)
T ss_pred CEEec---cchH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHH--------------HcC------------
Confidence 68999 9999 88999999999999998889999999999997642110 000
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
..++.+.
T Consensus 51 -------------------------------------------------------------------------~~~~~~~ 57 (183)
T cd06438 51 -------------------------------------------------------------------------ATVLERH 57 (183)
T ss_pred -------------------------------------------------------------------------CeEEEeC
Confidence 0112222
Q ss_pred cCCCCCCCChHHHHHHHHHhcC-CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSG-VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 337 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~-~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 337 (732)
+. ++++|++|+|.+++... .-+++|+++++|||++++ |+++.+++..|.+. ...||+.....+... ..+
T Consensus 58 ~~---~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~~-p~~l~~l~~~~~~~-----~~~v~g~~~~~~~~~-~~~ 127 (183)
T cd06438 58 DP---ERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLVD-PNALEELNARFAAG-----ARVVQAYYNSKNPDD-SWI 127 (183)
T ss_pred CC---CCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCCC-hhHHHHHHHHHhhC-----CCeeEEEEeeeCCcc-CHH
Confidence 22 25789999999998731 014699999999999997 99999999988642 245777665554321 222
Q ss_pred HHH----HHHHHHHHHHHHhhcCCc-cceeccEEEechhcc
Q 004752 338 DGR----FRSAYCVQWQGMDGLKGP-VLSGTGYYIKRESLY 373 (732)
Q Consensus 338 ~~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~AL~ 373 (732)
... ...++.....++..+++. .+.|+|+++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~ 168 (183)
T cd06438 128 TRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVLR 168 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHHH
Confidence 222 223334455577777765 568999999999995
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.81 E-value=5e-19 Score=177.11 Aligned_cols=165 Identities=18% Similarity=0.121 Sum_probs=121.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+||.|+++++ | +++|+|+|||++|.|.+.+. . .
T Consensus 1 ViIp~---~Ne~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~-~------------------------- 46 (191)
T cd06436 1 VLVPC---LNEE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L-A------------------------- 46 (191)
T ss_pred CEEec---cccH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h-e-------------------------
Confidence 68999 9998 89999999999999 5 48999999999997753221 0 0
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
...+++.++.++
T Consensus 47 --------------------------------------------------------------------~~~~~v~~i~~~ 58 (191)
T cd06436 47 --------------------------------------------------------------------ITDSRVHLLRRH 58 (191)
T ss_pred --------------------------------------------------------------------ecCCcEEEEecc
Confidence 001346677654
Q ss_pred cCCCCCCCChHHHHHHHHHhcC-------CCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccC
Q 004752 259 KRPEHLHHFKAGALNVLLRVSG-------VISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNI 331 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~-------~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~ 331 (732)
... .+.+|++|+|.+++.+. .-.++|+|+++|+|..++ |++|++++.+|.|| +++.||.+..++|.
T Consensus 59 ~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~-~~~l~~~~~~~~~~----~v~~v~~~~~~~~~ 131 (191)
T cd06436 59 LPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRLD-PNALEAVAPYFSDP----RVAGTQSRVRMYNR 131 (191)
T ss_pred CCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCcC-HhHHHHHHHhhcCC----ceEEEeeeEEEecC
Confidence 211 14689999999998731 001358999999999987 99999988888776 48999999988875
Q ss_pred CCCchHHH----HHHHHHHHHHHHHhhcCCccceeccEEEechhcc
Q 004752 332 NKYDIYDG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 373 (732)
Q Consensus 332 ~~~d~~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~ 373 (732)
..+ .+.. +....+..++.++...+...++|+|+++||++|.
T Consensus 132 ~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 132 HKN-LLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred CCC-HHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 322 2221 2223345677788777766679999999999996
No 38
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=1.1e-17 Score=166.97 Aligned_cols=137 Identities=26% Similarity=0.372 Sum_probs=111.6
Q ss_pred EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHHHHHHH----HHHHHhhcCCc-cce
Q 004752 287 YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCV----QWQGMDGLKGP-VLS 361 (732)
Q Consensus 287 ~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~----~~~g~d~~~~~-~~~ 361 (732)
+|+++|||+.++ ||++++++.++.|| ++++||+|..++|. ++.+.+.+...+.. .....+..+.+ .+.
T Consensus 1 ~v~~~DaDt~~~-~d~l~~~~~~~~~~----~~~~vq~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (193)
T PF13632_consen 1 YVLFLDADTRLP-PDFLERLVAALEDP----KVDAVQGPIIFRNR--GSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLS 73 (193)
T ss_pred CEEEEcCCCCCC-hHHHHHHHHHHhCC----CceEEEccEEecCC--CChhheeehhhhhhhhhhhHHHHHhcCCCcccc
Confidence 589999999998 99999999998866 49999999998743 44444444444421 12233445444 568
Q ss_pred eccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceecccccccccccc-CC
Q 004752 362 GTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGIL-YQ 440 (732)
Q Consensus 362 Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~-~~ 440 (732)
|+|.++||+++.+ .+||+ +.
T Consensus 74 G~~~~~r~~~l~~-----------------------------------------------------------vg~~~~~~ 94 (193)
T PF13632_consen 74 GSGMLFRREALRE-----------------------------------------------------------VGGFDDPF 94 (193)
T ss_pred CcceeeeHHHHHH-----------------------------------------------------------hCcccccc
Confidence 9999999999962 45899 88
Q ss_pred CccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCc
Q 004752 441 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGL 491 (732)
Q Consensus 441 svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~ 491 (732)
+++||+++++++.++|||+.|+++ +.+++.+|+|+.++++||+||..|.
T Consensus 95 ~~~ED~~l~~~l~~~G~~~~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 95 SIGEDMDLGFRLRRAGYRIVYVPD--AIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred cccchHHHHHHHHHCCCEEEEecc--cceeeeCCCCHHHHHHHHHHHHhhh
Confidence 999999999999999999999985 6789999999999999999999998
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=3.7e-17 Score=163.07 Aligned_cols=193 Identities=15% Similarity=0.128 Sum_probs=134.2
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|+|+|+||+ |||+.+.+.+|+.|+++++||. .+|+|+|||++|.|.+.+.+.
T Consensus 1 p~vsiii~~---~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPV---YNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEec---ccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 789999999 9998678999999999999986 899999999998554322211
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
|.+ ..+.+.+
T Consensus 53 --------------------------~~~--------------------------------------------~~~~~~~ 62 (202)
T cd04184 53 --------------------------YAA--------------------------------------------QDPRIKV 62 (202)
T ss_pred --------------------------HHh--------------------------------------------cCCCEEE
Confidence 000 0124555
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINK 333 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~ 333 (732)
+..++ +.+++.|+|.+++. +++||++++|+|.++. |++|.+++..+ .+|+ ++.|.+.........
T Consensus 63 ~~~~~-----~~g~~~a~n~g~~~----a~~d~i~~ld~D~~~~-~~~l~~~~~~~~~~~~----~~~v~~~~~~~~~~~ 128 (202)
T cd04184 63 VFREE-----NGGISAATNSALEL----ATGEFVALLDHDDELA-PHALYEVVKALNEHPD----ADLIYSDEDKIDEGG 128 (202)
T ss_pred EEccc-----CCCHHHHHHHHHHh----hcCCEEEEECCCCcCC-hHHHHHHHHHHHhCCC----CCEEEccHHhccCCC
Confidence 54443 47899999999999 8899999999999987 99999999888 5553 566655544322110
Q ss_pred CchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhH
Q 004752 334 YDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVL 413 (732)
Q Consensus 334 ~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (732)
...... +.... ..+......+.|.++++||+++..
T Consensus 129 -~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~--------------------------------------- 163 (202)
T cd04184 129 -KRSEPF----FKPDW-SPDLLLSQNYIGHLLVYRRSLVRQ--------------------------------------- 163 (202)
T ss_pred -CEeccc----cCCCC-CHHHhhhcCCccceEeEEHHHHHH---------------------------------------
Confidence 000000 00000 000111223456777899999852
Q ss_pred HHhhccccccceeccccccccccccCC-CccchHHHHHHHHhCCCeEEEeCC
Q 004752 414 QEETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 414 ~~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+.+ ...||.+.++|++.+||+.+|+++
T Consensus 164 --------------------iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~ 195 (202)
T cd04184 164 --------------------VGGFREGFEGAQDYDLVLRVSEHTDRIAHIPR 195 (202)
T ss_pred --------------------hCCCCcCcccchhHHHHHHHHhccceEEEccH
Confidence 4567665 457999999999999999999975
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.71 E-value=1.3e-16 Score=159.21 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=132.7
Q ss_pred EEEEecCCCCCCc-hHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccc
Q 004752 98 DVFICTADPEKEP-AIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (732)
Q Consensus 98 dV~I~t~~pynEp-~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (732)
+|+||| |||+ ++.+.+|+.|+++++||. .+|+|+|||+++.+...+.+
T Consensus 1 sviip~---~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~-------------------------- 49 (201)
T cd04195 1 SVLMSV---YIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLE-------------------------- 49 (201)
T ss_pred CEEEEc---cccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHH--------------------------
Confidence 589999 9986 468999999999999995 68999999995532221111
Q ss_pred ccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEe
Q 004752 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVS 256 (732)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~ 256 (732)
.|.+ ..| +.++.
T Consensus 50 -----------------------~~~~--------------------------------------------~~~-i~~i~ 61 (201)
T cd04195 50 -----------------------EFKR--------------------------------------------KLP-LKVVP 61 (201)
T ss_pred -----------------------HHHh--------------------------------------------cCC-eEEEE
Confidence 0100 112 66776
Q ss_pred cccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCch
Q 004752 257 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 336 (732)
Q Consensus 257 Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 336 (732)
.++ +.|+++|+|.|++. ++||||+++|+|.+++ |+++.+++..|.+ +++++.|.+.....+.+....
T Consensus 62 ~~~-----n~G~~~a~N~g~~~----a~gd~i~~lD~Dd~~~-~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 128 (201)
T cd04195 62 LEK-----NRGLGKALNEGLKH----CTYDWVARMDTDDISL-PDRFEKQLDFIEK---NPEIDIVGGGVLEFDSDGNDI 128 (201)
T ss_pred cCc-----cccHHHHHHHHHHh----cCCCEEEEeCCccccC-cHHHHHHHHHHHh---CCCeEEEcccEEEECCCCCee
Confidence 655 36899999999999 8999999999999987 9999999998852 234778877665443221111
Q ss_pred HHH----HHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhh
Q 004752 337 YDG----RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNV 412 (732)
Q Consensus 337 ~~~----~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (732)
... .....+.. . .....++|.+.++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~rr~~~~~-------------------------------------- 164 (201)
T cd04195 129 GKRRLPTSHDDILKF---A---RRRSPFNHPTVMFRKSKVLA-------------------------------------- 164 (201)
T ss_pred ccccCCCCHHHHHHH---h---ccCCCCCChHHhhhHHHHHH--------------------------------------
Confidence 000 00111111 0 11223456677899998852
Q ss_pred HHHhhccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCC
Q 004752 413 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 413 ~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||......||.++.+++..+|+++.|+++
T Consensus 165 ---------------------~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~ 195 (201)
T cd04195 165 ---------------------VGGYQDLPLVEDYALWARMLANGARFANLPE 195 (201)
T ss_pred ---------------------cCCcCCCCCchHHHHHHHHHHcCCceecccH
Confidence 4578777889999999999999999999874
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=1.1e-15 Score=150.85 Aligned_cols=186 Identities=17% Similarity=0.085 Sum_probs=129.3
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccc
Q 004752 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (732)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (732)
+|+||| |||+ +.+.+++.|+.+++||. ++|+|+|||++|.|.+.+.+.
T Consensus 1 sivi~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvDd~s~d~~~~~~~~~-------------------------- 48 (202)
T cd06433 1 SIITPT---YNQA-ETLEETIDSVLSQTYPN--IEYIVIDGGSTDGTVDIIKKY-------------------------- 48 (202)
T ss_pred CEEEec---cchH-HHHHHHHHHHHhCCCCC--ceEEEEeCCCCccHHHHHHHh--------------------------
Confidence 489999 9998 88999999999999986 899999999999765322110
Q ss_pred cCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEec
Q 004752 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSR 257 (732)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~R 257 (732)
.. ...++..
T Consensus 49 ------------------------~~-----------------------------------------------~~~~~~~ 57 (202)
T cd06433 49 ------------------------ED-----------------------------------------------KITYWIS 57 (202)
T ss_pred ------------------------Hh-----------------------------------------------hcEEEEe
Confidence 00 0123333
Q ss_pred ccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCCCch
Q 004752 258 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDI 336 (732)
Q Consensus 258 ekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 336 (732)
++ ..++++|+|.|++. +++|||+++|+|.++. |+.+.+++..+ .++ +.++|.+...+.+.+....
T Consensus 58 ~~-----~~g~~~a~n~~~~~----a~~~~v~~ld~D~~~~-~~~~~~~~~~~~~~~----~~~~v~g~~~~~~~~~~~~ 123 (202)
T cd06433 58 EP-----DKGIYDAMNKGIAL----ATGDIIGFLNSDDTLL-PGALLAVVAAFAEHP----EVDVVYGDVLLVDENGRVI 123 (202)
T ss_pred cC-----CcCHHHHHHHHHHH----cCCCEEEEeCCCcccC-chHHHHHHHHHHhCC----CccEEEeeeEEEcCCCCcc
Confidence 33 46899999999999 8999999999999997 89999988444 444 3566665554443221111
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHh
Q 004752 337 YDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEE 416 (732)
Q Consensus 337 ~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (732)
.... ...............+|++.++||+++..
T Consensus 124 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 156 (202)
T cd06433 124 GRRR-----PPPFLDKFLLYGMPICHQATFFRRSLFEK------------------------------------------ 156 (202)
T ss_pred cCCC-----CcchhhhHHhhcCcccCcceEEEHHHHHH------------------------------------------
Confidence 0000 00011112223445678888999999853
Q ss_pred hccccccceeccccccccccccCC-CccchHHHHHHHHhCCCeEEEeCC
Q 004752 417 TGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 417 ~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+.+ ...||.+..+++..+|++++++++
T Consensus 157 -----------------~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~ 188 (202)
T cd06433 157 -----------------YGGFDESYRIAADYDLLLRLLLAGKIFKYLPE 188 (202)
T ss_pred -----------------hCCCchhhCchhhHHHHHHHHHcCCceEecch
Confidence 2346554 568999999999999999998874
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.65 E-value=1.2e-15 Score=163.27 Aligned_cols=110 Identities=17% Similarity=0.045 Sum_probs=89.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccc
Q 004752 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (732)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (732)
+|+||+ |||+++.+.+||.|+++++||....+|+|+|||++|.|.+.+.+..
T Consensus 1 SIIIp~---~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~------------------------- 52 (299)
T cd02510 1 SVIIIF---HNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEY------------------------- 52 (299)
T ss_pred CEEEEE---ecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHH-------------------------
Confidence 589999 9998789999999999999987667999999999997754322100
Q ss_pred cCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEec
Q 004752 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSR 257 (732)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~R 257 (732)
.....|+++++..
T Consensus 53 -------------------------------------------------------------------~~~~~~~v~vi~~ 65 (299)
T cd02510 53 -------------------------------------------------------------------YKKYLPKVKVLRL 65 (299)
T ss_pred -------------------------------------------------------------------HhhcCCcEEEEEc
Confidence 0001245777765
Q ss_pred ccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004752 258 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (732)
Q Consensus 258 ekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (732)
++ ..+++.|.|.|++. ++||||+++|+|+.+. |++|.+++..+..
T Consensus 66 ~~-----n~G~~~a~N~g~~~----A~gd~i~fLD~D~~~~-~~wL~~ll~~l~~ 110 (299)
T cd02510 66 KK-----REGLIRARIAGARA----ATGDVLVFLDSHCEVN-VGWLEPLLARIAE 110 (299)
T ss_pred CC-----CCCHHHHHHHHHHH----ccCCEEEEEeCCcccC-ccHHHHHHHHHHh
Confidence 54 47899999999999 8999999999999996 9999999988763
No 43
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.65 E-value=9.4e-15 Score=151.68 Aligned_cols=171 Identities=13% Similarity=0.034 Sum_probs=106.9
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCc
Q 004752 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (732)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (732)
..|.|+|+||+ |||+ ..+..++.++.....+...++|+|+|||++|.|.+.+.+.. +++
T Consensus 7 ~~~~vsVvIp~---yne~-~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t~~i~~~~~----------~~~------- 65 (243)
T PLN02726 7 GAMKYSIIVPT---YNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSPDGTQDVVKQLQ----------KVY------- 65 (243)
T ss_pred CCceEEEEEcc---CCch-hhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCHHHHHHHHH----------Hhc-------
Confidence 46899999999 9998 66778877776543222269999999999998864332211 000
Q ss_pred ccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcE
Q 004752 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLL 252 (732)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 252 (732)
..+++
T Consensus 66 ---------------------------------------------------------------------------~~~~v 70 (243)
T PLN02726 66 ---------------------------------------------------------------------------GEDRI 70 (243)
T ss_pred ---------------------------------------------------------------------------CCCcE
Confidence 00135
Q ss_pred EEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCC
Q 004752 253 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 332 (732)
Q Consensus 253 ~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 332 (732)
.++.+++ +.+|++|+|.+++. ++||+|+++|+|...+ |++|.+++..+.+++ ...|.+.....+..
T Consensus 71 ~~~~~~~-----n~G~~~a~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~l~~~~~~~~----~~~v~g~r~~~~~~ 136 (243)
T PLN02726 71 LLRPRPG-----KLGLGTAYIHGLKH----ASGDFVVIMDADLSHH-PKYLPSFIKKQRETG----ADIVTGTRYVKGGG 136 (243)
T ss_pred EEEecCC-----CCCHHHHHHHHHHH----cCCCEEEEEcCCCCCC-HHHHHHHHHHHHhcC----CcEEEEccccCCCC
Confidence 5555444 46899999999998 8999999999999986 999999998886543 44554442211110
Q ss_pred -CCchHHHH-HHHHHHHHHHHHhhcCCccceeccEEEechhcc
Q 004752 333 -KYDIYDGR-FRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 373 (732)
Q Consensus 333 -~~d~~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~ 373 (732)
..-.+... ...++.....-..+.+..-.+|...++||+++.
T Consensus 137 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~d~~g~~~~~rr~~~~ 179 (243)
T PLN02726 137 VHGWDLRRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKRSALE 179 (243)
T ss_pred cCCccHHHHHHHHHHHHHHHHHhCCCCCcCCCcccceeHHHHH
Confidence 01011111 111222222222222333455666689999986
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.64 E-value=3.2e-15 Score=149.82 Aligned_cols=193 Identities=16% Similarity=0.123 Sum_probs=131.0
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccc
Q 004752 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (732)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (732)
+|+||| |||+ ..+.+++.|+++++|| +++|+|+|||++|.|.+.+.+.++ +
T Consensus 1 sIvIp~---yn~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~~----------~------------- 51 (214)
T cd04196 1 AVLMAT---YNGE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYID----------K------------- 51 (214)
T ss_pred CEEEEe---cCcH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHHh----------c-------------
Confidence 589999 9999 8899999999999999 499999999999987643322110 0
Q ss_pred cCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEec
Q 004752 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSR 257 (732)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~R 257 (732)
|| +.+.++..
T Consensus 52 ---------------------------------------------~~-------------------------~~~~~~~~ 61 (214)
T cd04196 52 ---------------------------------------------DP-------------------------FIIILIRN 61 (214)
T ss_pred ---------------------------------------------CC-------------------------ceEEEEeC
Confidence 00 12444444
Q ss_pred ccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCCCch
Q 004752 258 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDI 336 (732)
Q Consensus 258 ekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 336 (732)
++ .+++++|+|.++.. ++||||+++|+|.++. |+.|.+++..+ .++ ..+++.+.....+.+.. .
T Consensus 62 ~~-----~~G~~~~~n~g~~~----~~g~~v~~ld~Dd~~~-~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~ 126 (214)
T cd04196 62 GK-----NLGVARNFESLLQA----ADGDYVFFCDQDDIWL-PDKLERLLKAFLKDD----KPLLVYSDLELVDENGN-P 126 (214)
T ss_pred CC-----CccHHHHHHHHHHh----CCCCEEEEECCCcccC-hhHHHHHHHHHhcCC----CceEEecCcEEECCCCC-C
Confidence 43 47999999999998 8999999999999987 99999999884 443 46667766544332111 1
Q ss_pred HHHHHHHHHHH--HHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHH
Q 004752 337 YDGRFRSAYCV--QWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQ 414 (732)
Q Consensus 337 ~~~~~~~f~~~--~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (732)
........... ............++|+++++||+++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---------------------------------------- 166 (214)
T cd04196 127 IGESFFEYQKIKPGTSFNNLLFQNVVTGCTMAFNRELLEL---------------------------------------- 166 (214)
T ss_pred cccccccccccCCccCHHHHHHhCccCCceeeEEHHHHHh----------------------------------------
Confidence 11000000000 001111122345678899999999853
Q ss_pred HhhccccccceeccccccccccccCC-CccchHHHHHHHHhCCCeEEEeCC
Q 004752 415 EETGVLASCSYEHQTKWGEEVGILYQ-SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 415 ~~~~~v~~c~ye~~t~~g~~~G~~~~-svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.++++.. ...||....+++.. |++..|+++
T Consensus 167 -------------------~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~ 197 (214)
T cd04196 167 -------------------ALPFPDADVIMHDWWLALLASA-FGKVVFLDE 197 (214)
T ss_pred -------------------hccccccccccchHHHHHHHHH-cCceEEcch
Confidence 3355555 67899999988877 668888875
No 45
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=8.3e-15 Score=140.25 Aligned_cols=157 Identities=17% Similarity=0.173 Sum_probs=122.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+|+.|+.+++||. .+|+|+|||+++.|.+.+.+.
T Consensus 1 vii~~---~~~~-~~l~~~l~sl~~~~~~~--~~iiivdd~s~~~~~~~~~~~--------------------------- 47 (166)
T cd04186 1 IIIVN---YNSL-EYLKACLDSLLAQTYPD--FEVIVVDNASTDGSVELLREL--------------------------- 47 (166)
T ss_pred CEEEe---cCCH-HHHHHHHHHHHhccCCC--eEEEEEECCCCchHHHHHHHh---------------------------
Confidence 68999 9996 88999999999999964 799999999998654322110
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
.+++.++..+
T Consensus 48 ----------------------------------------------------------------------~~~~~~~~~~ 57 (166)
T cd04186 48 ----------------------------------------------------------------------FPEVRLIRNG 57 (166)
T ss_pred ----------------------------------------------------------------------CCCeEEEecC
Confidence 0124455443
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 338 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 338 (732)
+ +.++++|+|.+++. +++|+++++|+|.++. |+++.+++..+.+. ++++.++..
T Consensus 58 ~-----~~g~~~a~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~---~~~~~~~~~------------- 111 (166)
T cd04186 58 E-----NLGFGAGNNQGIRE----AKGDYVLLLNPDTVVE-PGALLELLDAAEQD---PDVGIVGPK------------- 111 (166)
T ss_pred C-----CcChHHHhhHHHhh----CCCCEEEEECCCcEEC-ccHHHHHHHHHHhC---CCceEEEcc-------------
Confidence 3 47899999999999 7999999999999987 99999998866532 346767543
Q ss_pred HHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhc
Q 004752 339 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 418 (732)
Q Consensus 339 ~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (732)
++|++.++||+++..
T Consensus 112 ---------------------~~~~~~~~~~~~~~~-------------------------------------------- 126 (166)
T cd04186 112 ---------------------VSGAFLLVRREVFEE-------------------------------------------- 126 (166)
T ss_pred ---------------------CceeeEeeeHHHHHH--------------------------------------------
Confidence 688889999998852
Q ss_pred cccccceeccccccccccccCCC--ccchHHHHHHHHhCCCeEEEeCC
Q 004752 419 VLASCSYEHQTKWGEEVGILYQS--VSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 419 ~v~~c~ye~~t~~g~~~G~~~~s--vtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+... ..||.+.++++.++||++.++++
T Consensus 127 ---------------~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~ 159 (166)
T cd04186 127 ---------------VGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQ 159 (166)
T ss_pred ---------------cCCCChhhhccccHHHHHHHHHHcCCeEEEccc
Confidence 23555542 45999999999999999999875
No 46
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=1.4e-14 Score=146.65 Aligned_cols=178 Identities=17% Similarity=0.093 Sum_probs=122.2
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccc
Q 004752 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (732)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (732)
|+|+||+ |||+ ..+.+++.|++++.|+. .+|+|+|||++|.|.+.+.+
T Consensus 1 vsvii~~---~n~~-~~l~~~l~sl~~q~~~~--~evivvdd~s~d~~~~~~~~-------------------------- 48 (221)
T cd02522 1 LSIIIPT---LNEA-ENLPRLLASLRRLNPLP--LEIIVVDGGSTDGTVAIARS-------------------------- 48 (221)
T ss_pred CEEEEEc---cCcH-HHHHHHHHHHHhccCCC--cEEEEEeCCCCccHHHHHhc--------------------------
Confidence 6899999 9998 57999999999999954 89999999999865421100
Q ss_pred ccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEe
Q 004752 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVS 256 (732)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~ 256 (732)
+++.++.
T Consensus 49 -------------------------------------------------------------------------~~~~~~~ 55 (221)
T cd02522 49 -------------------------------------------------------------------------AGVVVIS 55 (221)
T ss_pred -------------------------------------------------------------------------CCeEEEe
Confidence 1244543
Q ss_pred cccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCch
Q 004752 257 REKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDI 336 (732)
Q Consensus 257 Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~ 336 (732)
. ..+|++|+|.++.. +++|+|+++|+|.++. |+++.+++..+.++. ...+.....+.+. +.
T Consensus 56 --~-----~~g~~~a~n~g~~~----a~~~~i~~~D~D~~~~-~~~l~~l~~~~~~~~----~~~~~~~~~~~~~---~~ 116 (221)
T cd02522 56 --S-----PKGRARQMNAGAAA----ARGDWLLFLHADTRLP-PDWDAAIIETLRADG----AVAGAFRLRFDDP---GP 116 (221)
T ss_pred --C-----CcCHHHHHHHHHHh----ccCCEEEEEcCCCCCC-hhHHHHHHHHhhcCC----cEEEEEEeeecCC---cc
Confidence 2 24699999999998 8899999999999997 999999876665432 2222222223321 11
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHh
Q 004752 337 YDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEE 416 (732)
Q Consensus 337 ~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (732)
.... ............+..+.+.|.++||+++..
T Consensus 117 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~------------------------------------------ 150 (221)
T cd02522 117 RLRL----LELGANLRSRLFGLPYGDQGLFIRRELFEE------------------------------------------ 150 (221)
T ss_pred chhh----hhhcccceecccCCCcCCceEEEEHHHHHH------------------------------------------
Confidence 1110 111111111122233455677888887752
Q ss_pred hccccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEE
Q 004752 417 TGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTY 461 (732)
Q Consensus 417 ~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy 461 (732)
.+||+++...||++.++++..+|+++.+
T Consensus 151 -----------------~G~fd~~~~~ED~d~~~r~~~~G~~~~~ 178 (221)
T cd02522 151 -----------------LGGFPELPLMEDVELVRRLRRRGRPALL 178 (221)
T ss_pred -----------------hCCCCccccccHHHHHHHHHhCCCEEEc
Confidence 4578888899999999999999999876
No 47
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.62 E-value=1.7e-14 Score=141.39 Aligned_cols=171 Identities=18% Similarity=0.119 Sum_probs=120.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+++||.|+.+++|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 ivip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~t~~~~~~~~-------------------------- 48 (182)
T cd06420 1 LIITT---YNRP-EALELVLKSVLNQSILP--FEVIIADDGSTEETKELIEEFK-------------------------- 48 (182)
T ss_pred CEEee---cCCh-HHHHHHHHHHHhccCCC--CEEEEEeCCCchhHHHHHHHHH--------------------------
Confidence 68999 9998 78999999999999886 7999999999996643221110
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
+ + ... .+.++.++
T Consensus 49 ------------------------~---~---------------------------------------~~~-~~~~~~~~ 61 (182)
T cd06420 49 ------------------------S---Q---------------------------------------FPI-PIKHVWQE 61 (182)
T ss_pred ------------------------h---h---------------------------------------cCC-ceEEEEcC
Confidence 0 0 000 13344433
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 338 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 338 (732)
+. ..+|++|+|.+++. ++||+|+++|+|.+++ |++|.+++..+ ++ .++ |.+++...+.+...
T Consensus 62 ~~----~~~~~~~~n~g~~~----a~g~~i~~lD~D~~~~-~~~l~~~~~~~-~~----~~~-v~g~~~~~~~~~~~--- 123 (182)
T cd06420 62 DE----GFRKAKIRNKAIAA----AKGDYLIFIDGDCIPH-PDFIADHIELA-EP----GVF-LSGSRVLLNEKLTE--- 123 (182)
T ss_pred Cc----chhHHHHHHHHHHH----hcCCEEEEEcCCcccC-HHHHHHHHHHh-CC----CcE-Eecceeecccccce---
Confidence 21 34799999999999 8999999999999997 99999999877 43 244 33444333221110
Q ss_pred HHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhc
Q 004752 339 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 418 (732)
Q Consensus 339 ~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (732)
..+.|+++.++|+.+..
T Consensus 124 -------------------~~~~~~~~~~~r~~~~~-------------------------------------------- 140 (182)
T cd06420 124 -------------------RGIRGCNMSFWKKDLLA-------------------------------------------- 140 (182)
T ss_pred -------------------eEeccceEEEEHHHHHH--------------------------------------------
Confidence 34567777888887752
Q ss_pred cccccceeccccccccccccCCC---ccchHHHHHHHHhCCCeEEEeCC
Q 004752 419 VLASCSYEHQTKWGEEVGILYQS---VSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 419 ~v~~c~ye~~t~~g~~~G~~~~s---vtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+... -.||++.++|+.++|++..++.+
T Consensus 141 ---------------~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~ 174 (182)
T cd06420 141 ---------------VNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKF 174 (182)
T ss_pred ---------------hCCCCcccccCCcchHHHHHHHHHcCCcEEEecc
Confidence 45666543 26999999999999977666653
No 48
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.61 E-value=2.6e-14 Score=144.94 Aligned_cols=107 Identities=17% Similarity=0.111 Sum_probs=84.2
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ ..+.+++.++.++.|+ ..++|+|+|||++|.|.+.+.+
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~---------------------------- 47 (224)
T cd06442 1 IIIPT---YNER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRE---------------------------- 47 (224)
T ss_pred CeEec---cchh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHH----------------------------
Confidence 68999 9998 7799999999999982 3499999999999977532211
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
|.+ ..|.+.++..+
T Consensus 48 ----------------------~~~--------------------------------------------~~~~i~~~~~~ 61 (224)
T cd06442 48 ----------------------LAK--------------------------------------------EYPRVRLIVRP 61 (224)
T ss_pred ----------------------HHH--------------------------------------------hCCceEEEecC
Confidence 000 01234555555
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (732)
+ +.+|++|+|.+++. +.||+|+++|+|..+. |++|..++..+.+++
T Consensus 62 ~-----n~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~~ 107 (224)
T cd06442 62 G-----KRGLGSAYIEGFKA----ARGDVIVVMDADLSHP-PEYIPELLEAQLEGG 107 (224)
T ss_pred C-----CCChHHHHHHHHHH----cCCCEEEEEECCCCCC-HHHHHHHHHHHhcCC
Confidence 4 47899999999999 8999999999999987 999999999876553
No 49
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.61 E-value=3.8e-14 Score=144.19 Aligned_cols=111 Identities=14% Similarity=0.076 Sum_probs=83.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+|+.|+++++||. .++|+|+|||++|.|.+.+.+.
T Consensus 1 ViIp~---yn~~-~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~t~~i~~~~--------------------------- 48 (219)
T cd06913 1 IILPV---HNGE-QWLDECLESVLQQDFEG-TLELSVFNDASTDKSAEIIEKW--------------------------- 48 (219)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCCCC-CEEEEEEeCCCCccHHHHHHHH---------------------------
Confidence 68999 9998 89999999999999983 5999999999999875432211
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
.+ +. ..+++.++..+
T Consensus 49 -----------------------~~---~~---------------------------------------~~~~~~~~~~~ 63 (219)
T cd06913 49 -----------------------RK---KL---------------------------------------EDSGVIVLVGS 63 (219)
T ss_pred -----------------------HH---hC---------------------------------------cccCeEEEEec
Confidence 00 00 01234555443
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (732)
.+.+ .+.+.+.|+|.+++. ++||+++++|+|.++. |+.+.+.+..+.+
T Consensus 64 ~~~~-~~~G~~~a~N~g~~~----a~gd~i~~lD~D~~~~-~~~l~~~~~~~~~ 111 (219)
T cd06913 64 HNSP-SPKGVGYAKNQAIAQ----SSGRYLCFLDSDDVMM-PQRIRLQYEAALQ 111 (219)
T ss_pred ccCC-CCccHHHHHHHHHHh----cCCCEEEEECCCccCC-hhHHHHHHHHHHh
Confidence 3211 246899999999999 8999999999999987 9999888776643
No 50
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.58 E-value=1.9e-14 Score=142.91 Aligned_cols=153 Identities=18% Similarity=0.197 Sum_probs=117.5
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHH-H
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR-S 343 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~-~ 343 (732)
.+.|.+||..+++. . +++|+++++|+|+.++ |++|++++..+.||+ +|.|.++....+. +.+....+ .
T Consensus 15 ~N~Kv~nL~~~~~~-~--a~~d~~~~~DsDi~v~-p~~L~~lv~~l~~p~----vglVt~~~~~~~~---~~~~~~l~~~ 83 (175)
T PF13506_consen 15 CNPKVNNLAQGLEA-G--AKYDYLVISDSDIRVP-PDYLRELVAPLADPG----VGLVTGLPRGVPA---RGFWSRLEAA 83 (175)
T ss_pred CChHHHHHHHHHHh-h--CCCCEEEEECCCeeEC-HHHHHHHHHHHhCCC----CcEEEecccccCC---cCHHHHHHHH
Confidence 57899999999996 3 7999999999999998 999999999999874 8999876665543 23333332 2
Q ss_pred HHHHHHHHHh-hcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccc
Q 004752 344 AYCVQWQGMD-GLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLAS 422 (732)
Q Consensus 344 f~~~~~~g~d-~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 422 (732)
++.....-.. .-+..++.|..+.+||++|++
T Consensus 84 ~~~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~------------------------------------------------ 115 (175)
T PF13506_consen 84 FFNFLPGVLQALGGAPFAWGGSMAFRREALEE------------------------------------------------ 115 (175)
T ss_pred HHhHHHHHHHHhcCCCceecceeeeEHHHHHH------------------------------------------------
Confidence 2221111111 224567899999999999963
Q ss_pred cceeccccccccccccC--CCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccC----CChHHHhhhhhcccc
Q 004752 423 CSYEHQTKWGEEVGILY--QSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTST----TNLNDLLIQGTRWGS 489 (732)
Q Consensus 423 c~ye~~t~~g~~~G~~~--~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP----~~l~~~~~Qr~RWa~ 489 (732)
.+||.. +.+.||+.+|-+++++|||++..+. +......| .+++++++++.||++
T Consensus 116 -----------~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~--~v~~~~~~~~~~~s~~~~~~r~~RW~r 175 (175)
T PF13506_consen 116 -----------IGGFEALADYLADDYALGRRLRARGYRVVLSPY--PVVQTSVPRTLEDSFRDFFRRQLRWAR 175 (175)
T ss_pred -----------cccHHHHhhhhhHHHHHHHHHHHCCCeEEEcch--heeecccCccccccHHHHHHHHHhhcC
Confidence 346554 6899999999999999999999874 66666677 489999999999985
No 51
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.55 E-value=1.4e-13 Score=137.77 Aligned_cols=165 Identities=15% Similarity=0.054 Sum_probs=121.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||| |||+ ..+.+++.|++++.||. .+|+|+|||++|.|.+.+.+..
T Consensus 1 viI~~---~n~~-~~l~~~l~sl~~q~~~~--~eiiivD~~s~d~t~~~~~~~~-------------------------- 48 (202)
T cd04185 1 AVVVT---YNRL-DLLKECLDALLAQTRPP--DHIIVIDNASTDGTAEWLTSLG-------------------------- 48 (202)
T ss_pred CEEEe---eCCH-HHHHHHHHHHHhccCCC--ceEEEEECCCCcchHHHHHHhc--------------------------
Confidence 68999 9998 88999999999999995 6899999999997653221100
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
...+ +.++..+
T Consensus 49 --------------------------------------------------------------------~~~~-i~~~~~~ 59 (202)
T cd04185 49 --------------------------------------------------------------------DLDN-IVYLRLP 59 (202)
T ss_pred --------------------------------------------------------------------CCCc-eEEEECc
Confidence 0011 4566554
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYD 338 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~ 338 (732)
+ ..+++.++|.+++..- .+++|+++++|+|.+++ |+++++++..+.+++ ++.+. |..+.. +.
T Consensus 60 ~-----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~~-~~~l~~l~~~~~~~~----~~~~~-~~~~~~----~~-- 121 (202)
T cd04185 60 E-----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIPD-PDALEKLLAYADKDN----PQFLA-PLVLDP----DG-- 121 (202)
T ss_pred c-----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCcC-hHHHHHHHHHHhcCC----ceEec-ceeEcC----CC--
Confidence 4 3678899999887632 25799999999999997 999999999887553 66663 443332 10
Q ss_pred HHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhc
Q 004752 339 GRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 418 (732)
Q Consensus 339 ~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (732)
+++|.++||+++..
T Consensus 122 ----------------------~~~~~~~~~~~~~~-------------------------------------------- 135 (202)
T cd04185 122 ----------------------SFVGVLISRRVVEK-------------------------------------------- 135 (202)
T ss_pred ----------------------ceEEEEEeHHHHHH--------------------------------------------
Confidence 45678999998853
Q ss_pred cccccceeccccccccccccCC--CccchHHHHHHHHhCCCeEEEeCC
Q 004752 419 VLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 419 ~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+|+... ...||.+.+.++..+|++. |+++
T Consensus 136 ---------------~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~ 167 (202)
T cd04185 136 ---------------IGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPD 167 (202)
T ss_pred ---------------hCCCChhhhccchHHHHHHHHHHcCCcE-Eecc
Confidence 1223221 3469999999999999999 9875
No 52
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.55 E-value=4.2e-14 Score=154.02 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=89.2
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcc
Q 004752 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (732)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (732)
.|.|+|+||+ ||++ ..+.+|+.|+++++|+. ++|+|+|||++|.|.+.+.+.
T Consensus 5 ~p~vSVIIP~---yN~~-~~L~~~l~Sl~~Qt~~~--~EIIiVdDgStD~t~~i~~~~---------------------- 56 (328)
T PRK10073 5 TPKLSIIIPL---YNAG-KDFRAFMESLIAQTWTA--LEIIIVNDGSTDNSVEIAKHY---------------------- 56 (328)
T ss_pred CCeEEEEEec---cCCH-HHHHHHHHHHHhCCCCC--eEEEEEeCCCCccHHHHHHHH----------------------
Confidence 5889999999 9998 78999999999999986 999999999999775322211
Q ss_pred cccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEE
Q 004752 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLV 253 (732)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~ 253 (732)
.+ ..|++.
T Consensus 57 ----------------------------~~--------------------------------------------~~~~i~ 64 (328)
T PRK10073 57 ----------------------------AE--------------------------------------------NYPHVR 64 (328)
T ss_pred ----------------------------Hh--------------------------------------------hCCCEE
Confidence 00 124566
Q ss_pred EEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004752 254 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 313 (732)
Q Consensus 254 yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~ 313 (732)
++.. + +.|.++|.|.|++. ++||||+++|+|..+. |+.+.+++..+.++
T Consensus 65 vi~~-~-----n~G~~~arN~gl~~----a~g~yi~flD~DD~~~-p~~l~~l~~~~~~~ 113 (328)
T PRK10073 65 LLHQ-A-----NAGVSVARNTGLAV----ATGKYVAFPDADDVVY-PTMYETLMTMALED 113 (328)
T ss_pred EEEC-C-----CCChHHHHHHHHHh----CCCCEEEEECCCCccC-hhHHHHHHHHHHhC
Confidence 7653 2 47899999999999 8999999999999987 99999999877543
No 53
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.52 E-value=3.1e-13 Score=136.70 Aligned_cols=107 Identities=20% Similarity=0.127 Sum_probs=82.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCC--CCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDY--PVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYF 176 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dY--P~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf 176 (732)
|+||+ |||+ ..+.+++.++.++.+ +....+|+|+|||++|.|.+.+.+..
T Consensus 1 iiip~---yN~~-~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t~~~~~~~~------------------------ 52 (211)
T cd04188 1 VVIPA---YNEE-KRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGTAEVARKLA------------------------ 52 (211)
T ss_pred CEEcc---cChH-HHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCchHHHHHHHH------------------------
Confidence 68999 9998 789999999998865 44459999999999997753221110
Q ss_pred ccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCc-EEEE
Q 004752 177 SEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPL-LVYV 255 (732)
Q Consensus 177 ~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~-l~yv 255 (732)
+ ..|. ++++
T Consensus 53 --------------------------~--------------------------------------------~~~~~i~~i 62 (211)
T cd04188 53 --------------------------R--------------------------------------------KNPALIRVL 62 (211)
T ss_pred --------------------------H--------------------------------------------hCCCcEEEE
Confidence 0 0112 3555
Q ss_pred ecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004752 256 SREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 313 (732)
Q Consensus 256 ~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~ 313 (732)
..++ ..||++|+|.|++. ++||+|+++|+|...+ |+.+.+++..+.++
T Consensus 63 ~~~~-----n~G~~~a~~~g~~~----a~gd~i~~ld~D~~~~-~~~l~~l~~~~~~~ 110 (211)
T cd04188 63 TLPK-----NRGKGGAVRAGMLA----ARGDYILFADADLATP-FEELEKLEEALKTS 110 (211)
T ss_pred Eccc-----CCCcHHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc
Confidence 5444 36799999999999 8999999999999987 99999999986544
No 54
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.52 E-value=5e-14 Score=144.24 Aligned_cols=141 Identities=18% Similarity=0.123 Sum_probs=87.9
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCC---CCEEEEeCCCCCCCchHHHHHHH---HhhcCCCCCCcEEEEcc
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISN---SPYILGLDCDMYCNDPTSARQAM---CFHLDPKISSSLAFVQF 324 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~---ge~Il~lDAD~~~~~p~~L~~~v---~~f~D~~~~~~vg~VQ~ 324 (732)
++.++..++ +.|+++|+|.|++. +. +|+|+++|+|..++ |++|.+++ ..+. .+++++.+ +
T Consensus 48 ~i~~i~~~~-----n~G~~~a~N~g~~~----a~~~~~d~v~~lD~D~~~~-~~~l~~l~~~~~~~~---~~~~~~~~-~ 113 (237)
T cd02526 48 KIELIHLGE-----NLGIAKALNIGIKA----ALENGADYVLLFDQDSVPP-PDMVEKLLAYKILSD---KNSNIGAV-G 113 (237)
T ss_pred cEEEEECCC-----ceehHHhhhHHHHH----HHhCCCCEEEEECCCCCcC-HhHHHHHHHHHHhhc---cCCCeEEE-e
Confidence 466776655 36799999999998 54 49999999999987 99999985 3222 12346655 4
Q ss_pred CcccccCCCCchHHHHHHH-HHHHHHHHHhhc-CCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhccc
Q 004752 325 PQKFHNINKYDIYDGRFRS-AYCVQWQGMDGL-KGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 402 (732)
Q Consensus 325 Pq~f~n~~~~d~~~~~~~~-f~~~~~~g~d~~-~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (732)
|+................. ............ ......|+|+++||+++..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~---------------------------- 165 (237)
T cd02526 114 PRIIDRRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALEK---------------------------- 165 (237)
T ss_pred eeEEcCCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHHH----------------------------
Confidence 5543322111100000000 000000001111 2234568889999999863
Q ss_pred CCCCCCchhhHHHhhccccccceeccccccccccccCCCc--cchHHHHHHHHhCCCeEEEeCC
Q 004752 403 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSV--SEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 403 ~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~sv--tED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+.... .||++.++|+..+||+..|++.
T Consensus 166 -------------------------------~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~ 198 (237)
T cd02526 166 -------------------------------VGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPD 198 (237)
T ss_pred -------------------------------hCCCCHHHcCccchHHHHHHHHHcCCcEEEEcC
Confidence 346765532 5899999999999999999985
No 55
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.52 E-value=6.3e-12 Score=142.76 Aligned_cols=164 Identities=16% Similarity=0.190 Sum_probs=105.6
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCCCchHH--HHHHHHH-HHHHHHHhhcCCc
Q 004752 283 SNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDIYD--GRFRSAY-CVQWQGMDGLKGP 358 (732)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~~~--~~~~~f~-~~~~~g~d~~~~~ 358 (732)
...|||+.+|||+.+. |+.+.+++.-+. || +++-|.+.-+..|.. ..... +..+.+. ...+++.+..-|.
T Consensus 200 ~~~~~il~~DaDt~~~-p~~~~~lv~~m~~d~----~i~gvCG~t~i~n~~-~s~~t~~Q~fEY~ish~l~Ka~Es~fG~ 273 (527)
T PF03142_consen 200 DFYEYILMVDADTKFD-PDSVNRLVDAMERDP----KIGGVCGETRIDNKG-QSWWTMYQVFEYAISHHLQKAFESVFGS 273 (527)
T ss_pred cceEEEEEecCCceEc-HHHHHHHHHHHcCCC----CeEEEeceeEEcCCC-CCHhhheeccchhHHHHHHHHHHHHhCc
Confidence 3469999999999987 999999998775 55 476666654445532 12221 1122211 3455566665454
Q ss_pred c--ceeccEEEechhcccc-ccc------hhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhccccccceeccc
Q 004752 359 V--LSGTGYYIKRESLYAD-FTH------TELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQT 429 (732)
Q Consensus 359 ~--~~Gtg~~~RR~AL~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t 429 (732)
+ +.|.-+++|-+|+... .+. .+..++|... . .+
T Consensus 274 VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~-------------------~--~d----------------- 315 (527)
T PF03142_consen 274 VTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSEN-------------------P--VD----------------- 315 (527)
T ss_pred eeecCCcceeeeeehhccccccccccccchHHHHHHhhc-------------------c--ch-----------------
Confidence 3 3577778999998751 000 0011111000 0 00
Q ss_pred ccccccc-ccCCCccchHHHHHHHHhC--CCeEEEeCCCCCeeEeccCCChHHHhhhhhccccCcccccc
Q 004752 430 KWGEEVG-ILYQSVSEDLFTGFILHCK--GWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGL 496 (732)
Q Consensus 430 ~~g~~~G-~~~~svtED~~t~~~l~~~--Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G~~qi~~ 496 (732)
... ..-..+.||-.++-.|.++ |||..|++. +.+.+.+|++++.++.||+||..|++-.++
T Consensus 316 ----tlh~~nl~~lGEDR~LttLlLk~~~~~k~~y~~~--A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 316 ----TLHQKNLLDLGEDRWLTTLLLKQFPGYKTEYVPS--AVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred ----HHHHHhhhhcchhHHHHHHHHhhCCCceEEEccc--ccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 000 0112578999998777776 899999985 999999999999999999999999986543
No 56
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.51 E-value=3.6e-14 Score=135.14 Aligned_cols=161 Identities=27% Similarity=0.329 Sum_probs=105.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+|+.+++++.|+. .+|+|+|||+++.|.+.+.+..
T Consensus 1 Viip~---~n~~-~~l~~~l~sl~~q~~~~--~~iivvdd~s~d~t~~~~~~~~-------------------------- 48 (180)
T cd06423 1 IIVPA---YNEE-AVIERTIESLLALDYPK--LEVIVVDDGSTDDTLEILEELA-------------------------- 48 (180)
T ss_pred Ceecc---cChH-HHHHHHHHHHHhCCCCc--eEEEEEeCCCccchHHHHHHHh--------------------------
Confidence 67999 9999 89999999999999965 8999999999997653221110
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
. ...+.+.++..+
T Consensus 49 ------------------------~-------------------------------------------~~~~~~~~~~~~ 61 (180)
T cd06423 49 ------------------------A-------------------------------------------LYIRRVLVVRDK 61 (180)
T ss_pred ------------------------c-------------------------------------------cccceEEEEEec
Confidence 0 000124455544
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccCcccccCCCCchH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFPQKFHNINKYDIY 337 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 337 (732)
+ ..+|+.|+|.+++. +++|+|+++|+|..+. |++|.+++..+ .++ +++.|.......+... ..+
T Consensus 62 ~-----~~g~~~~~n~~~~~----~~~~~i~~~D~D~~~~-~~~l~~~~~~~~~~~----~~~~v~~~~~~~~~~~-~~~ 126 (180)
T cd06423 62 E-----NGGKAGALNAGLRH----AKGDIVVVLDADTILE-PDALKRLVVPFFADP----KVGAVQGRVRVRNGSE-NLL 126 (180)
T ss_pred c-----cCCchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHhccCC----CeeeEeeeEEEecCcC-cce
Confidence 4 47899999999999 7999999999999997 99999995544 444 4666665544332210 111
Q ss_pred HHHHHHHH----HHHHHHHhhcCC-ccceeccEEEechhcc
Q 004752 338 DGRFRSAY----CVQWQGMDGLKG-PVLSGTGYYIKRESLY 373 (732)
Q Consensus 338 ~~~~~~f~----~~~~~g~d~~~~-~~~~Gtg~~~RR~AL~ 373 (732)
.......+ .....+....+. ..+.|+++++||+++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 167 (180)
T cd06423 127 TRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREALR 167 (180)
T ss_pred eccchheecceeeeeeehhheecceeecCchHHHHHHHHHH
Confidence 11110000 011111111222 3568888999999886
No 57
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.47 E-value=9.4e-13 Score=137.89 Aligned_cols=48 Identities=19% Similarity=0.129 Sum_probs=39.9
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCC-CCCCCeEEEEEcCCCCccchH
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALD-YPVDKLHVYLSDDGGSPITLH 146 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~d-YP~~kl~v~v~DDg~~~~T~~ 146 (732)
|.|+|+||| |||+ +.+.+|+.|+.++. .+...++|+|+||||+|.|.+
T Consensus 1 ~~vSVIi~~---yN~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~ 49 (248)
T PRK10063 1 MLLSVITVA---FRNL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTRE 49 (248)
T ss_pred CeEEEEEEe---CCCH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHH
Confidence 679999999 9998 78999999998642 233359999999999998764
No 58
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.47 E-value=2.3e-12 Score=137.30 Aligned_cols=109 Identities=16% Similarity=0.262 Sum_probs=87.0
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCc
Q 004752 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (732)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (732)
..|.|+|+||| |||+ +.+.+||.|+++++||. ++|+|+|||+++ .+.+.+..
T Consensus 3 ~~p~VSVIip~---yN~~-~~l~~~l~Svl~Qt~~~--~EiIVVDDgS~~--~~~~~~~~-------------------- 54 (279)
T PRK10018 3 DNPLISIYMPT---WNRQ-QLAIRAIKSVLRQDYSN--WEMIIVDDCSTS--WEQLQQYV-------------------- 54 (279)
T ss_pred CCCEEEEEEEe---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCC--HHHHHHHH--------------------
Confidence 46899999999 9998 67789999999999996 999999999984 21111100
Q ss_pred ccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcE
Q 004752 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLL 252 (732)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 252 (732)
++ ...|++
T Consensus 55 -----------------------------~~-------------------------------------------~~~~ri 62 (279)
T PRK10018 55 -----------------------------TA-------------------------------------------LNDPRI 62 (279)
T ss_pred -----------------------------HH-------------------------------------------cCCCCE
Confidence 00 011467
Q ss_pred EEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 253 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 253 ~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
.|+..++ +.|++.|+|.|+.. ++||||+++|+|.+.. |+.|.+.+.++.
T Consensus 63 ~~i~~~~-----n~G~~~a~N~gi~~----a~g~~I~~lDaDD~~~-p~~l~~~~~~~~ 111 (279)
T PRK10018 63 TYIHNDI-----NSGACAVRNQAIML----AQGEYITGIDDDDEWT-PNRLSVFLAHKQ 111 (279)
T ss_pred EEEECCC-----CCCHHHHHHHHHHH----cCCCEEEEECCCCCCC-ccHHHHHHHHHH
Confidence 8886554 47899999999999 8999999999999987 999999888764
No 59
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.46 E-value=3.9e-14 Score=134.82 Aligned_cols=164 Identities=16% Similarity=0.064 Sum_probs=109.8
Q ss_pred EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcccccc
Q 004752 98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177 (732)
Q Consensus 98 dV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 177 (732)
+|+||| |||+ +.+.+|+.|++.+.++. .+|+|+|||++|.|.+.+.+..+
T Consensus 1 Svvip~---~n~~-~~l~~~l~sl~~q~~~~--~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPT---YNEA-EYLERTLESLLKQTDPD--FEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEE---SS-T-TTHHHHHHHHHHHSGCE--EEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEe---eCCH-HHHHHHHHHHhhccCCC--EEEEEeccccccccccccccccc------------------------
Confidence 699999 9996 88999999999996654 89999999999876533222110
Q ss_pred cCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEec
Q 004752 178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSR 257 (732)
Q Consensus 178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~R 257 (732)
..+++.|+.+
T Consensus 51 ----------------------------------------------------------------------~~~~i~~i~~ 60 (169)
T PF00535_consen 51 ----------------------------------------------------------------------SDPNIRYIRN 60 (169)
T ss_dssp ----------------------------------------------------------------------CSTTEEEEEH
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 1136889988
Q ss_pred ccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchH
Q 004752 258 EKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIY 337 (732)
Q Consensus 258 ekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~ 337 (732)
+++ .++++|+|.|++. ++++|++++|+|.++. |++|.+++..+.+.. ..+..........+.......
T Consensus 61 ~~n-----~g~~~~~n~~~~~----a~~~~i~~ld~D~~~~-~~~l~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 128 (169)
T PF00535_consen 61 PEN-----LGFSAARNRGIKH----AKGEYILFLDDDDIIS-PDWLEELVEALEKNP--PDVVIGSVIYIDDDNRYPDRR 128 (169)
T ss_dssp CCC-----SHHHHHHHHHHHH------SSEEEEEETTEEE--TTHHHHHHHHHHHCT--TEEEEEEEEEEECTTETEECC
T ss_pred ccc-----ccccccccccccc----cceeEEEEeCCCceEc-HHHHHHHHHHHHhCC--CcEEEEEEEEecCCccccccc
Confidence 764 5899999999999 8999999999999998 899999999987632 223333222222221111100
Q ss_pred HH--HHHHHHHHHHHHHhhcCCccceeccEEEechhcc
Q 004752 338 DG--RFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLY 373 (732)
Q Consensus 338 ~~--~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~ 373 (732)
.. .....+..............++|+++++||++++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 129 LRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp CTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred cchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 00 0011223334445556677899999999999985
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.42 E-value=4.9e-11 Score=130.25 Aligned_cols=118 Identities=18% Similarity=0.138 Sum_probs=87.6
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhh
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMAL------DYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRR 164 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~------dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~ 164 (732)
.+..|.|+|+||+ |||+ ..+.+++.++.++ ++|....+|+|+||||+|.|.+.+.+.++ +
T Consensus 66 ~~~~~~isVVIP~---yNe~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~~----------~ 131 (333)
T PTZ00260 66 KDSDVDLSIVIPA---YNEE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFWR----------Q 131 (333)
T ss_pred CCCCeEEEEEEee---CCCH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHHH----------h
Confidence 3457899999999 9998 6788888888763 24555699999999999988753322110 0
Q ss_pred cCccccCcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhc
Q 004752 165 YGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQA 244 (732)
Q Consensus 165 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 244 (732)
+.
T Consensus 132 ~~------------------------------------------------------------------------------ 133 (333)
T PTZ00260 132 NI------------------------------------------------------------------------------ 133 (333)
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cccCcCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004752 245 DLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (732)
Q Consensus 245 ~~~~~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (732)
..-+++..+..++ +.||++|+|.|++. ++||+|+++|||...+ |+.+.+++..+.+
T Consensus 134 --~~~~~i~vi~~~~-----N~G~~~A~~~Gi~~----a~gd~I~~~DaD~~~~-~~~l~~l~~~l~~ 189 (333)
T PTZ00260 134 --NPNIDIRLLSLLR-----NKGKGGAVRIGMLA----SRGKYILMVDADGATD-IDDFDKLEDIMLK 189 (333)
T ss_pred --CCCCcEEEEEcCC-----CCChHHHHHHHHHH----ccCCEEEEEeCCCCCC-HHHHHHHHHHHHH
Confidence 0002355665544 47899999999998 8999999999999976 9999888887753
No 61
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.41 E-value=2.1e-12 Score=126.80 Aligned_cols=164 Identities=15% Similarity=0.085 Sum_probs=107.9
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ |||+ +.+.+|+.++.++.|+....+|+|+|||++|.|.+.+.+.
T Consensus 1 iii~~---~n~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~--------------------------- 49 (185)
T cd04179 1 VVIPA---YNEE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIAREL--------------------------- 49 (185)
T ss_pred Ceecc---cChH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHH---------------------------
Confidence 57999 9998 7899999999999996557999999999999765322211
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
.+ ..|.++++..+
T Consensus 50 -----------------------~~--------------------------------------------~~~~~~~~~~~ 62 (185)
T cd04179 50 -----------------------AA--------------------------------------------RVPRVRVIRLS 62 (185)
T ss_pred -----------------------HH--------------------------------------------hCCCeEEEEcc
Confidence 00 11234566555
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCC-CchH
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINK-YDIY 337 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~-~d~~ 337 (732)
++ .+|++|+|.+++. +.||+++++|+|..+. |++|.+++..+.++ +.++|+.+....+... ...+
T Consensus 63 ~n-----~G~~~a~n~g~~~----a~gd~i~~lD~D~~~~-~~~l~~l~~~~~~~----~~~~v~g~~~~~~~~~~~~~~ 128 (185)
T cd04179 63 RN-----FGKGAAVRAGFKA----ARGDIVVTMDADLQHP-PEDIPKLLEKLLEG----GADVVIGSRFVRGGGAGMPLL 128 (185)
T ss_pred CC-----CCccHHHHHHHHH----hcCCEEEEEeCCCCCC-HHHHHHHHHHHhcc----CCcEEEEEeecCCCcccchHH
Confidence 43 6799999999999 8899999999999986 99999999985543 2455666655443211 1111
Q ss_pred HHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc
Q 004752 338 DGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 374 (732)
Q Consensus 338 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~ 374 (732)
.+.....+........+.......|...++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 165 (185)
T cd04179 129 RRLGSRLFNFLIRLLLGVRISDTQSGFRLFRREVLEA 165 (185)
T ss_pred HHHHHHHHHHHHHHHcCCCCcCCCCceeeeHHHHHHH
Confidence 1111111111112222222333455566899999963
No 62
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.30 E-value=1.7e-11 Score=129.94 Aligned_cols=145 Identities=14% Similarity=-0.048 Sum_probs=91.7
Q ss_pred CcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004752 250 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 329 (732)
Q Consensus 250 p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 329 (732)
|++.|+..++ +.|.|+|+|.|++..-. .++|+|+++|.|.+++ |+.+.+++..+..+ +.+++.|+ |..+.
T Consensus 45 ~~i~~i~~~~-----N~G~a~a~N~Gi~~a~~-~~~d~i~~lD~D~~~~-~~~l~~l~~~~~~~--~~~~~~~~-~~~~~ 114 (281)
T TIGR01556 45 QKIALIHLGD-----NQGIAGAQNQGLDASFR-RGVQGVLLLDQDSRPG-NAFLAAQWKLLSAE--NGQACALG-PRFFD 114 (281)
T ss_pred CCeEEEECCC-----CcchHHHHHHHHHHHHH-CCCCEEEEECCCCCCC-HHHHHHHHHHHHhc--CCceEEEC-CeEEc
Confidence 4577887554 46899999999987210 2689999999999997 99999999887532 12578775 44333
Q ss_pred cCCCCchHHH--HHHHHHHHH-HHHHhh-cCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCC
Q 004752 330 NINKYDIYDG--RFRSAYCVQ-WQGMDG-LKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNAN 405 (732)
Q Consensus 330 n~~~~d~~~~--~~~~f~~~~-~~g~d~-~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (732)
.. ....+.. ......... ...... ....+..++|+++||+++..
T Consensus 115 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~li~~~~~~~------------------------------- 162 (281)
T TIGR01556 115 RG-TSRRLPAIHLDGLLLRQISLDGLTTPQKTSFLISSGCLITREVYQR------------------------------- 162 (281)
T ss_pred CC-CcccCCceeecccceeeecccccCCceeccEEEcCcceeeHHHHHH-------------------------------
Confidence 21 1111110 000000000 000011 11234567889999999852
Q ss_pred CCCchhhHHHhhccccccceeccccccccccccCC--CccchHHHHHHHHhCCCeEEEeCC
Q 004752 406 GENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 406 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+++ .=.||.+.++|+.++||+++++++
T Consensus 163 ----------------------------iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~ 195 (281)
T TIGR01556 163 ----------------------------LGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPD 195 (281)
T ss_pred ----------------------------hCCccHhhcccchHHHHHHHHHHCCCEEEEeCC
Confidence 2345543 124899999999999999999985
No 63
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.28 E-value=5e-11 Score=128.72 Aligned_cols=124 Identities=19% Similarity=0.116 Sum_probs=88.9
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
...-|+|+|+||+ |||+ +.+.+++.++.++.++....+|+|+||||+|.|.+.+.+ ++.
T Consensus 27 ~~~~~~vSVVIPa---yNee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~--------------~~~--- 85 (306)
T PRK13915 27 AKAGRTVSVVLPA---LNEE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAA--------------AGA--- 85 (306)
T ss_pred ccCCCCEEEEEec---CCcH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHH--------------hcc---
Confidence 3457899999999 9998 789999999998766322469999999999987643221 110
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
++ +.
T Consensus 86 ------------------------------------~v----------------------~~------------------ 89 (306)
T PRK13915 86 ------------------------------------RV----------------------VS------------------ 89 (306)
T ss_pred ------------------------------------hh----------------------hc------------------
Confidence 00 00
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC-CCchHHHHHHHHhhc-CCCCCCcEEEEcc
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMY-CNDPTSARQAMCFHL-DPKISSSLAFVQF 324 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~-~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~ 324 (732)
....+.+ .+ .+.+|++|+|.++.. ++||+|+++|||.. ++ |+++.+++..+. ||+ +++|.+
T Consensus 90 ~~~~~~~--~~--~n~Gkg~A~~~g~~~----a~gd~vv~lDaD~~~~~-p~~l~~l~~~l~~~~~----~~~V~g 152 (306)
T PRK13915 90 REEILPE--LP--PRPGKGEALWRSLAA----TTGDIVVFVDADLINFD-PMFVPGLLGPLLTDPG----VHLVKA 152 (306)
T ss_pred chhhhhc--cc--cCCCHHHHHHHHHHh----cCCCEEEEEeCccccCC-HHHHHHHHHHHHhCCC----ceEEEE
Confidence 0000001 01 147899999999998 89999999999997 55 999999998886 654 566654
No 64
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.27 E-value=7.7e-11 Score=116.00 Aligned_cols=107 Identities=12% Similarity=0.114 Sum_probs=65.5
Q ss_pred CcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004752 250 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 329 (732)
Q Consensus 250 p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 329 (732)
|++.++..++ +.+|++|+|.+++. +.+|+|+++|+|..+. |++|.+++..+ +++ .++.+.. ....
T Consensus 55 ~~i~~i~~~~-----n~G~~~a~n~g~~~----a~~d~i~~~D~D~~~~-~~~l~~l~~~~-~~~--~~~v~g~--~~~~ 119 (181)
T cd04187 55 PRVKVIRLSR-----NFGQQAALLAGLDH----ARGDAVITMDADLQDP-PELIPEMLAKW-EEG--YDVVYGV--RKNR 119 (181)
T ss_pred CCEEEEEecC-----CCCcHHHHHHHHHh----cCCCEEEEEeCCCCCC-HHHHHHHHHHH-hCC--CcEEEEE--ecCC
Confidence 3566766544 46899999999999 8899999999999986 99999999874 332 2333222 1111
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccc
Q 004752 330 NINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA 374 (732)
Q Consensus 330 n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~ 374 (732)
+ ...........+........+..-+...|+..++||+++..
T Consensus 120 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 161 (181)
T cd04187 120 K---ESWLKRLTSKLFYRLINKLSGVDIPDNGGDFRLMDRKVVDA 161 (181)
T ss_pred c---chHHHHHHHHHHHHHHHHHcCCCCCCCCCCEEEEcHHHHHH
Confidence 1 11111111111111222223333345567778899999974
No 65
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.24 E-value=1.5e-09 Score=118.15 Aligned_cols=111 Identities=16% Similarity=0.137 Sum_probs=81.6
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHc-CCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCc
Q 004752 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMA-LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (732)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~-~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (732)
.++++|+||+ |||+ +.+.+++.++.+ ++-.....+|+|+|||++|.|.+.+.+.++ +
T Consensus 5 ~~~vSVVIP~---yNE~-~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T~~il~~~~~----------~-------- 62 (325)
T PRK10714 5 IKKVSVVIPV---YNEQ-ESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAEMLVEAAQ----------A-------- 62 (325)
T ss_pred CCeEEEEEcc---cCch-hhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcHHHHHHHHHh----------h--------
Confidence 4679999999 9998 677777776543 111112489999999999988754433210 0
Q ss_pred ccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcE
Q 004752 173 QAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLL 252 (732)
Q Consensus 173 ~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l 252 (732)
.-+++
T Consensus 63 ---------------------------------------------------------------------------~~~~v 67 (325)
T PRK10714 63 ---------------------------------------------------------------------------PDSHI 67 (325)
T ss_pred ---------------------------------------------------------------------------cCCcE
Confidence 00134
Q ss_pred EEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 253 VYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 253 ~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
+.+..++ +.||++|+|+|++. ++||+++++|||...+ |+.+.+++..+.
T Consensus 68 ~~i~~~~-----n~G~~~A~~~G~~~----A~gd~vv~~DaD~q~~-p~~i~~l~~~~~ 116 (325)
T PRK10714 68 VAILLNR-----NYGQHSAIMAGFSH----VTGDLIITLDADLQNP-PEEIPRLVAKAD 116 (325)
T ss_pred EEEEeCC-----CCCHHHHHHHHHHh----CCCCEEEEECCCCCCC-HHHHHHHHHHHH
Confidence 4444333 47899999999999 8999999999999976 999999998775
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.20 E-value=3.3e-10 Score=105.11 Aligned_cols=113 Identities=28% Similarity=0.272 Sum_probs=82.8
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccccccc
Q 004752 99 VFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSE 178 (732)
Q Consensus 99 V~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 178 (732)
|+||+ +||+ ..+..|+.+++.++|+. .+++|+||++++.+.+.+.+..+
T Consensus 1 iii~~---~~~~-~~l~~~l~s~~~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPA---YNEE-PYLERCLESLLAQTYPN--FEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEee---cCcH-HHHHHHHHHHHhCCccc--eEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 57999 8897 78999999999999954 88999999999855432222110
Q ss_pred CCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEEEecc
Q 004752 179 ADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVYVSRE 258 (732)
Q Consensus 179 ~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~yv~Re 258 (732)
+ .+...++.++
T Consensus 50 ------------------------~---------------------------------------------~~~~~~~~~~ 60 (156)
T cd00761 50 ------------------------K---------------------------------------------DPRVIRVINE 60 (156)
T ss_pred ------------------------c---------------------------------------------CCCeEEEEec
Confidence 0 0113344343
Q ss_pred cCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCcEEEEccC
Q 004752 259 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKISSSLAFVQFP 325 (732)
Q Consensus 259 krp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~P 325 (732)
+ +.+|++++|.++.. .++|+++++|+|.++. |+++...+..+ .++ +.+.|+++
T Consensus 61 ~-----~~g~~~~~~~~~~~----~~~d~v~~~d~D~~~~-~~~~~~~~~~~~~~~----~~~~v~~~ 114 (156)
T cd00761 61 E-----NQGLAAARNAGLKA----ARGEYILFLDADDLLL-PDWLERLVAELLADP----EADAVGGP 114 (156)
T ss_pred C-----CCChHHHHHHHHHH----hcCCEEEEECCCCccC-ccHHHHHHHHHhcCC----CceEEecc
Confidence 3 57899999999999 7899999999999987 89998874443 333 46677654
No 67
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.18 E-value=6.7e-10 Score=118.43 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=85.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCCCCchHHHHHH---
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR--- 342 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~--- 342 (732)
-++|.|.|.|+.. +++|+|+++|+|+++. |+++.+++.+..+=+.+ .-+++-.|..+.+.+....+.....
T Consensus 74 f~~a~arN~g~~~----A~~d~l~flD~D~i~~-~~~i~~~~~~~~~l~~~-~~~~~~~p~~yl~~~~~~~~~~~~~~~~ 147 (281)
T PF10111_consen 74 FSRAKARNIGAKY----ARGDYLIFLDADCIPS-PDFIEKLLNHVKKLDKN-PNAFLVYPCLYLSEEGSEKFYSQFKNLW 147 (281)
T ss_pred cCHHHHHHHHHHH----cCCCEEEEEcCCeeeC-HHHHHHHHHHHHHHhcC-CCceEEEeeeeccchhhHHHhhcchhcc
Confidence 4899999999999 8999999999999998 99999999832110011 1244556666654322222211110
Q ss_pred --HHHHHHHH-HHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004752 343 --SAYCVQWQ-GMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 419 (732)
Q Consensus 343 --~f~~~~~~-g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (732)
.+.+.... ..+.++.....|++.+++|+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~--------------------------------------------- 182 (281)
T PF10111_consen 148 DHEFLESFISGKNSLWEFIAFASSCFLINREDFLE--------------------------------------------- 182 (281)
T ss_pred hHHHHHHHhhccccccccccccceEEEEEHHHHHH---------------------------------------------
Confidence 01111111 122233334466777899988753
Q ss_pred ccccceeccccccccccccCC---CccchHHHHHHHHhCCCeEEEeCC
Q 004752 420 LASCSYEHQTKWGEEVGILYQ---SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 420 v~~c~ye~~t~~g~~~G~~~~---svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.|||++. --.||++.+.||...|.+..++++
T Consensus 183 --------------iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~ 216 (281)
T PF10111_consen 183 --------------IGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPD 216 (281)
T ss_pred --------------hCCCCccccCCCcchHHHHHHHHHcCCcEecChH
Confidence 4566654 236999999999999999887764
No 68
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.15 E-value=1.1e-09 Score=117.92 Aligned_cols=198 Identities=18% Similarity=0.185 Sum_probs=132.1
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCcc
Q 004752 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQ 173 (732)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~ 173 (732)
.|.+.++|+| ||-. +.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.
T Consensus 2 ~~~i~~iiv~---yn~~-~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~---------------------- 53 (305)
T COG1216 2 MPKISIIIVT---YNRG-EDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKAR---------------------- 53 (305)
T ss_pred CcceEEEEEe---cCCH-HHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhh----------------------
Confidence 4789999999 9998 789999999999999973 45589999999765322110
Q ss_pred cccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEE
Q 004752 174 AYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLV 253 (732)
Q Consensus 174 ~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~ 253 (732)
..|++.
T Consensus 54 --------------------------------------------------------------------------~~~~v~ 59 (305)
T COG1216 54 --------------------------------------------------------------------------FFPNVR 59 (305)
T ss_pred --------------------------------------------------------------------------cCCcEE
Confidence 035678
Q ss_pred EEecccCCCCCCCChHHHHHHHHHhcCCCCCCC-EEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccccCC
Q 004752 254 YVSREKRPEHLHHFKAGALNVLLRVSGVISNSP-YILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNIN 332 (732)
Q Consensus 254 yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge-~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~ 332 (732)
++.-.+ +.|=||+.|.+++... .+++ ++++++-|+++. |++|.+++..+.+. +..+.|+.....++..
T Consensus 60 ~i~~~~-----NlG~agg~n~g~~~a~--~~~~~~~l~LN~D~~~~-~~~l~~ll~~~~~~---~~~~~~~~~i~~~~~~ 128 (305)
T COG1216 60 LIENGE-----NLGFAGGFNRGIKYAL--AKGDDYVLLLNPDTVVE-PDLLEELLKAAEED---PAAGVVGPLIRNYDES 128 (305)
T ss_pred EEEcCC-----CccchhhhhHHHHHHh--cCCCcEEEEEcCCeeeC-hhHHHHHHHHHHhC---CCCeEeeeeEecCCCC
Confidence 886554 4678999999998832 3444 899999998886 99999999888632 2466665444333211
Q ss_pred C-CchHHHHHHH---------HHHHHH--HHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhc
Q 004752 333 K-YDIYDGRFRS---------AYCVQW--QGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK 400 (732)
Q Consensus 333 ~-~d~~~~~~~~---------f~~~~~--~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (732)
. .+..+..... .++... ...+...+ .++|+++++||+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~li~~~~~~~-------------------------- 181 (305)
T COG1216 129 LYIDRRGGESDGLTGGWRASPLLEIAPDLSSYLEVVA-SLSGACLLIRREAFEK-------------------------- 181 (305)
T ss_pred cchheeccccccccccceecccccccccccchhhhhh-hcceeeeEEcHHHHHH--------------------------
Confidence 0 0100000000 000000 00000000 4688888999998852
Q ss_pred ccCCCCCCchhhHHHhhccccccceeccccccccccccCC--CccchHHHHHHHHhCCCeEEEeCC
Q 004752 401 QNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQ--SVSEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~--svtED~~t~~~l~~~Gwrsvy~~~ 464 (732)
.+||+.+ .-.||++.+.|+..+||++.|++.
T Consensus 182 ---------------------------------vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~ 214 (305)
T COG1216 182 ---------------------------------VGGFDERFFIYYEDVDLCLRARKAGYKIYYVPD 214 (305)
T ss_pred ---------------------------------hCCCCcccceeehHHHHHHHHHHcCCeEEEeec
Confidence 4456554 557999999999999999999985
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.10 E-value=7.2e-10 Score=130.28 Aligned_cols=166 Identities=19% Similarity=0.233 Sum_probs=111.7
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCcccccCCCCch---HHHHH
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKYDI---YDGRF 341 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~d~---~~~~~ 341 (732)
+.|-=.+|.+....+ .+=+||+.+|+|+.+. |+++.+++.-|. ||+ ||-+.+ +..|. .+. +.+..
T Consensus 424 ~~~r~~~y~~~~~L~--~~v~~il~vD~dT~~~-P~ai~~lv~~f~~dp~----VggaCG--~I~~~--~~~w~v~~Q~F 492 (862)
T KOG2571|consen 424 NQHRWVMYTAFKALM--PSVDYILVVDADTRLD-PDALYHLVKVFDEDPQ----VGGACG--RILNK--GGSWVVAYQNF 492 (862)
T ss_pred HHHHHHHHHHHHHhc--CcceEEEEecCCCccC-cHHHHHHHHHhccCcc----cceecc--ccccC--CCceEEeHHHH
Confidence 345555666666533 4567999999999987 999999999886 665 555555 22221 222 12222
Q ss_pred HHH-HHHHHHHHhhcCCccceeccE--EEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhc
Q 004752 342 RSA-YCVQWQGMDGLKGPVLSGTGY--YIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 418 (732)
Q Consensus 342 ~~f-~~~~~~g~d~~~~~~~~Gtg~--~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (732)
+.. -...++.-+..-|.+.|=.|| +||-+||.+.. .+..+|...
T Consensus 493 EY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~aL~~~~----~~~~y~~~~----------------------------- 539 (862)
T KOG2571|consen 493 EYAISHNLQKATESVFGCVSCLPGCFSLYRASALMDQF----VEYFYGEKF----------------------------- 539 (862)
T ss_pred HHHHHHHHHHhhhhhceeEEecCchhHHHHHHHHhcch----HHhhhchhh-----------------------------
Confidence 211 134566667766666665555 59999997621 111111100
Q ss_pred cccccceeccccccccccccCCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhccccC
Q 004752 419 VLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG 490 (732)
Q Consensus 419 ~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G 490 (732)
=|..-|..+ +..||-.+..++..+||+.-||.. +.+...+|+++.+++.||+||..|
T Consensus 540 ------------~~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a~--s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 540 ------------SGPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVAA--SDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred ------------cCccccccc-ccchhHHHHHHHHhccceeeeecc--ccccccCcHhHHHHHHHhhhhccc
Confidence 000113332 489999999999999999999985 899999999999999999999999
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.86 E-value=2.2e-08 Score=95.68 Aligned_cols=47 Identities=23% Similarity=0.292 Sum_probs=43.6
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchH
Q 004752 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (732)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (732)
.|.++|+||| |||+ ..+.++|.|++++.|+. .+|+|+|||++|.|.+
T Consensus 2 ~~~~siiip~---~n~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~ 48 (291)
T COG0463 2 MPKVSVVIPT---YNEE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTE 48 (291)
T ss_pred CccEEEEEec---cchh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHH
Confidence 5889999999 9999 89999999999999997 7899999999998764
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.83 E-value=2.8e-08 Score=102.43 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=39.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCC
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP 313 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~ 313 (732)
..+++.+.|.|+.. +.+|+|+++|+|..+. |+.+.++...+.++
T Consensus 56 ~~g~~~~~n~~~~~----a~~d~vl~lDaD~~~~-~~~~~~l~~~~~~~ 99 (229)
T cd02511 56 WDGFGAQRNFALEL----ATNDWVLSLDADERLT-PELADEILALLATD 99 (229)
T ss_pred CCChHHHHHHHHHh----CCCCEEEEEeCCcCcC-HHHHHHHHHHHhCC
Confidence 46899999999999 8999999999999997 99999999887644
No 72
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.57 E-value=1.1e-07 Score=101.62 Aligned_cols=153 Identities=18% Similarity=0.219 Sum_probs=105.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE-ccCcccccCCCCchHHHHHHH
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV-QFPQKFHNINKYDIYDGRFRS 343 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V-Q~Pq~f~n~~~~d~~~~~~~~ 343 (732)
-+.|-.|+=-|.+. ++.|+|++.|.|-.+. ||.+.++..-|+.++ ++|+| |+|-.+. .+..| ..-++ +
T Consensus 155 ~npKInN~mpgy~~----a~ydlvlisDsgI~m~-pdtildm~t~M~she---kmalvtq~py~~d-r~Gf~-atle~-~ 223 (431)
T KOG2547|consen 155 LNPKINNMMPGYRA----AKYDLVLISDSGIFMK-PDTILDMATTMMSHE---KMALVTQTPYCKD-RQGFD-ATLEQ-V 223 (431)
T ss_pred cChhhhccCHHHHH----hcCCEEEEecCCeeec-CchHHHHHHhhhccc---ceeeecCCceeec-cccch-hhhhh-e
Confidence 45688888888898 8999999999999987 999999998888654 79998 5554433 21111 11111 2
Q ss_pred HHHHHHHH----HhhcCCccceeccEEEechhccccccchhhhhccCCchhhhhhhhhhhcccCCCCCCchhhHHHhhcc
Q 004752 344 AYCVQWQG----MDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGV 419 (732)
Q Consensus 344 f~~~~~~g----~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (732)
+|...++. -+-.+-.+.+|-.|+.|+++|++
T Consensus 224 ~fgTsh~r~yl~~n~~~~~c~tgms~~mrK~~ld~--------------------------------------------- 258 (431)
T KOG2547|consen 224 YFGTSHPRIYLSGNVLGFNCSTGMSSMMRKEALDE--------------------------------------------- 258 (431)
T ss_pred eeccCCceEEEccccccccccccHHHHHHHHHHHH---------------------------------------------
Confidence 33322221 11122224467778899999974
Q ss_pred ccccceecccccccccccc--CCCccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCCChHHHhhhhhcccc
Q 004752 420 LASCSYEHQTKWGEEVGIL--YQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGS 489 (732)
Q Consensus 420 v~~c~ye~~t~~g~~~G~~--~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~~l~~~~~Qr~RWa~ 489 (732)
.+|+. .+.+.||...+-.+..+||++.+... ++-...+--+...+..|-.||..
T Consensus 259 --------------~ggi~~f~~yLaedyFaaksllSRG~ksaist~--palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 259 --------------CGGISAFGGYLAEDYFAAKSLLSRGWKSAISTH--PALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred --------------hccHHHHHHHHHHHHHHHHHHHhhhhhhhhccc--chhhhhhhhHHHHHHHHHHHhhh
Confidence 23321 23689999999999999999999874 55555666778888888888864
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.14 E-value=2.3e-05 Score=77.12 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=67.7
Q ss_pred CcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccCcccc
Q 004752 250 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFH 329 (732)
Q Consensus 250 p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~ 329 (732)
+++....|.+ .-+=.-|--+++.+ +.|+|+++.|||---+ |.++-+.+....| .+..+|-.-. |-
T Consensus 63 d~i~l~pR~~-----klGLgtAy~hgl~~----a~g~fiviMDaDlsHh-Pk~ipe~i~lq~~----~~~div~GTR-Ya 127 (238)
T KOG2978|consen 63 DNILLKPRTK-----KLGLGTAYIHGLKH----ATGDFIVIMDADLSHH-PKFIPEFIRLQKE----GNYDIVLGTR-YA 127 (238)
T ss_pred CcEEEEeccC-----cccchHHHHhhhhh----ccCCeEEEEeCccCCC-chhHHHHHHHhhc----cCcceeeeee-Ec
Confidence 3566777766 45677889999999 9999999999998855 9999888776543 2456665432 22
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHhhc-------CCccceeccEEEechhcc
Q 004752 330 NINKYDIYDGRFRSAYCVQWQGMDGL-------KGPVLSGTGYYIKRESLY 373 (732)
Q Consensus 330 n~~~~d~~~~~~~~f~~~~~~g~d~~-------~~~~~~Gtg~~~RR~AL~ 373 (732)
+. ...++ +.+.-++|-+|.+-+ +..-.+|+--.+|++.|.
T Consensus 128 ~~--ggV~g--W~mkRk~IS~gAn~la~~ll~~~~sdltGsFrLykk~vl~ 174 (238)
T KOG2978|consen 128 GG--GGVYG--WDMKRKIISRGANFLARILLNPGVSDLTGSFRLYKKEVLE 174 (238)
T ss_pred CC--Cceec--chhhHHHHhhhhHHHHHHhccCCCccCcceeeeehHHHHH
Confidence 21 11222 222233444444332 334457888889999885
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.01 E-value=3.4e-05 Score=80.56 Aligned_cols=43 Identities=23% Similarity=0.093 Sum_probs=33.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCC--CCCchHHHHHHHHhhc
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDM--YCNDPTSARQAMCFHL 311 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~--~~~~p~~L~~~v~~f~ 311 (732)
+.+|.||..-++-+ +.|+++++-|||- ...|=+.|.+++.--.
T Consensus 142 nrgKGgAvR~g~l~----~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 142 NRGKGGAVRKGMLS----SRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred cCCCCcceehhhHh----ccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 47899999999988 8999999999994 3444567777765333
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.84 E-value=0.00019 Score=78.43 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=36.9
Q ss_pred eEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCcc
Q 004752 97 IDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPI 143 (732)
Q Consensus 97 VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~ 143 (732)
+-|+|.| ||-| +.+++|+.|++++.+-.+..+|+|++||+++.
T Consensus 2 ~PVlv~a---yNRp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~ 44 (334)
T cd02514 2 IPVLVIA---CNRP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEE 44 (334)
T ss_pred cCEEEEe---cCCH-HHHHHHHHHHHhccccCCCceEEEEeCCCchH
Confidence 3588999 9997 89999999999987446678999999999873
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.22 E-value=0.017 Score=62.94 Aligned_cols=49 Identities=24% Similarity=0.185 Sum_probs=41.5
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSP 142 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~ 142 (732)
++++|+++|+|.- +||.-..+++||.|++.-.=|.---+|+++||=++.
T Consensus 151 pe~Lpt~SVviVF---HNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVF---HNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEE---ecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 6789999999999 999999999999999987644445578888887754
No 77
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=96.21 E-value=0.051 Score=65.07 Aligned_cols=192 Identities=19% Similarity=0.196 Sum_probs=111.4
Q ss_pred cccCCCCC--CCChHHHHHHHHHhcCCCCCCCEEEEeCCC--CCCCchHHH--HHHHHhhcCCC--------------CC
Q 004752 257 REKRPEHL--HHFKAGALNVLLRVSGVISNSPYILGLDCD--MYCNDPTSA--RQAMCFHLDPK--------------IS 316 (732)
Q Consensus 257 Rekrp~~~--~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD--~~~~~p~~L--~~~v~~f~D~~--------------~~ 316 (732)
|-|=||.| ..||.-|-|+|+=. +.||++=.+|+. .+.+ +.| |.++.-|.+.. ..
T Consensus 263 ri~LpG~pilGeGK~eNQNhaiiF----~rGe~lQ~IDmNQDnYle--E~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~ 336 (817)
T PF02364_consen 263 RIKLPGNPILGEGKPENQNHAIIF----TRGEYLQTIDMNQDNYLE--EALKMRNLLEEFEEMHGDSSSPYIPGIEEEGK 336 (817)
T ss_pred EEECCCCCcCCCCCccccceeEEE----EccccccccccchhhhHH--HHHHHHHHHHHHHhcCCCCCCCCCCCccccCC
Confidence 44556655 36899999999988 999999999994 4543 332 45555554321 13
Q ss_pred CcEEEEccCcccccCCCC---chHHHHHHHHHHHHHHHHhhcCCccceeccEEEechhccccccchhhhhccCCchhhhh
Q 004752 317 SSLAFVQFPQKFHNINKY---DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLIN 393 (732)
Q Consensus 317 ~~vg~VQ~Pq~f~n~~~~---d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~~~~~~~~~~~~~ 393 (732)
..++.|-++-+....+-+ |..+.+-..|=...++-+...++- -|||+.+- ++
T Consensus 337 ~~~aIlG~RE~IFs~~vg~L~~~aa~qE~~F~Tl~qR~la~p~~r------------------------lHYGHPD~-~n 391 (817)
T PF02364_consen 337 RPVAILGFREHIFSENVGSLGDFAAGQEQSFGTLFQRTLANPLVR------------------------LHYGHPDV-FN 391 (817)
T ss_pred CCceEecccceEecCCcchHHHHhhhhhHHHHHHHHHHHhcchhh------------------------ccCCCchh-hh
Confidence 456777766654432111 222222223333344444332222 23443221 11
Q ss_pred hhhhhhcccCCCCCCchhhHHHhhccccccceeccccccccccc----cCCCccchHHHHHHHHhCCCeEEEeCCCCCee
Q 004752 394 SLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGI----LYQSVSEDLFTGFILHCKGWTSTYLTPFRPQF 469 (732)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~----~~~svtED~~t~~~l~~~Gwrsvy~~~~~~~~ 469 (732)
...... .||. .+-+++||+..|+....||-++.+|. -..
T Consensus 392 ----------------------~~f~~T------------RGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h~e---y~q 434 (817)
T PF02364_consen 392 ----------------------RIFMTT------------RGGVSKASKGLHLSEDIFAGMNATLRGGRIKHCE---YIQ 434 (817)
T ss_pred ----------------------hhheec------------cCccchHhhcccccHHHHHHHHHHhcCCceeehh---hhh
Confidence 111110 1111 12379999999999999999999986 566
Q ss_pred EeccCC-ChHHHhhhhhccccCcccccccccCccccCCCCCChhhHHHHH
Q 004752 470 LGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYG 518 (732)
Q Consensus 470 ~g~aP~-~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~ 518 (732)
+|-.-+ .+.+-..=-..-+.|+-|..+||.-=-+ | .+|.+.+-+.+.
T Consensus 435 cGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrL-g-~~ld~~R~LSfy 482 (817)
T PF02364_consen 435 CGKGRDVGFNSILNFETKIASGMGEQMLSREYYRL-G-TRLDFFRFLSFY 482 (817)
T ss_pred cccccccCchhhhhhHhHhcCCccchhhhHHHHHh-h-ccCCHHHHHHHH
Confidence 666555 5555555567789999999988742222 2 567776666533
No 78
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.02 E-value=0.016 Score=63.26 Aligned_cols=50 Identities=22% Similarity=0.175 Sum_probs=44.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccc
Q 004752 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (732)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T 144 (732)
.++|.-+|+|+- +||....+.+||.|+++..=++--.+|+++||++.|.+
T Consensus 121 ~dlp~TsviITf---HNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe 170 (559)
T KOG3738|consen 121 VDLPPTSVIITF---HNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE 170 (559)
T ss_pred cCCCCceEEEEe---ccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH
Confidence 568999999999 99999999999999999884444679999999999853
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.44 E-value=0.043 Score=48.55 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=28.8
Q ss_pred CCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchH
Q 004752 107 EKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLH 146 (732)
Q Consensus 107 ynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~ 146 (732)
+||+ ..+...|..-+++.+- ++||.|||++|.|.+
T Consensus 1 rne~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~ 35 (97)
T PF13704_consen 1 RNEA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTRE 35 (97)
T ss_pred CChH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHH
Confidence 4787 6799999999888764 499999999998753
No 80
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.41 E-value=0.012 Score=68.39 Aligned_cols=113 Identities=21% Similarity=0.137 Sum_probs=83.6
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
.+.+|+++|+|+- +||...++.+||.|+.+..=|.--.+|+++||+++..-.
T Consensus 138 ~~~Lp~~Svii~f---~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l------------------------- 189 (578)
T KOG3736|consen 138 SDKLPTTSVIIIF---HNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHL------------------------- 189 (578)
T ss_pred ccccCCCceEEEE---ecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhh-------------------------
Confidence 3569999999999 999999999999999888755446789999999875210
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHH-HHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCc
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYE-MFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEM 249 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye-~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 249 (732)
++.-| .++ .+
T Consensus 190 ---------------------------~~~Ld~y~k------------------------------------------~~ 200 (578)
T KOG3736|consen 190 ---------------------------KDKLEEYVK------------------------------------------RF 200 (578)
T ss_pred ---------------------------hhhhHHHHh------------------------------------------hh
Confidence 11111 111 11
Q ss_pred CcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 250 PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 250 p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
+.+.++..++| .|+-.|.+.+-+. +.||+++++||-+-++ ..+|.-++.--
T Consensus 201 ~~v~i~r~~~R-----~GLIrARl~GA~~----A~geVL~FLDsHcE~n-~gWLePLL~~I 251 (578)
T KOG3736|consen 201 SKVRILRTKKR-----EGLIRARLLGASM----ATGEVLTFLDSHCEVN-VGWLEPLLARI 251 (578)
T ss_pred cceeEEeecch-----hhhHHHHhhhhhh----hhchheeeeecceeEe-cCcchHHHHHh
Confidence 12556655554 6788888888888 8999999999999987 78887776543
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=92.97 E-value=0.29 Score=50.46 Aligned_cols=45 Identities=18% Similarity=0.240 Sum_probs=36.6
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCC
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPK 314 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~ 314 (732)
..-|-+.|.|++. ++++|++.+.-|..+.+++++.+++..| .||+
T Consensus 40 ~s~~~~yN~a~~~----a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~ 85 (217)
T PF13712_consen 40 KSMAAAYNEAMEK----AKAKYLVFLHQDVFIINENWLEDILEIFEEDPN 85 (217)
T ss_dssp S-TTTHHHHHGGG------SSEEEEEETTEE-SSHHHHHHHHHHHHH-TT
T ss_pred cCHHHHHHHHHHh----CCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCC
Confidence 5577899999999 9999999999999998899999999999 7775
No 82
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=91.85 E-value=0.63 Score=52.65 Aligned_cols=48 Identities=25% Similarity=0.378 Sum_probs=30.1
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCCeEEEEEcCCCCccc
Q 004752 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPIT 144 (732)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP-~~kl~v~v~DDg~~~~T 144 (732)
...|.+-|+|-+ +|-| .-+.+||.++++.. | +++..|+|+.||+.+.|
T Consensus 90 ~~~~~~pVlV~A---cNRp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~ 138 (434)
T PF03071_consen 90 NKEPVIPVLVFA---CNRP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEV 138 (434)
T ss_dssp -------EEEEE---SS-T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHH
T ss_pred cCCCcceEEEEe---cCCc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHH
Confidence 456778888888 7787 77999999999988 6 46889999999998744
No 83
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=88.61 E-value=3.3 Score=44.09 Aligned_cols=54 Identities=11% Similarity=0.125 Sum_probs=38.0
Q ss_pred CCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEE-EcCCCC-ccchHhHH
Q 004752 92 DKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYL-SDDGGS-PITLHGMR 149 (732)
Q Consensus 92 ~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v-~DDg~~-~~T~~~l~ 149 (732)
.+-|+|=|+.|- -|-. ..+..=...+.+++||++++++-. +.|.+. +.|.+.|.
T Consensus 22 ~~~e~VLILtpl---rna~-~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~ 77 (269)
T PF03452_consen 22 RNKESVLILTPL---RNAA-SFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILE 77 (269)
T ss_pred ccCCeEEEEEec---CCch-HHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHH
Confidence 456888888888 3333 568889999999999999999854 444331 55554443
No 84
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=87.79 E-value=6.9 Score=41.42 Aligned_cols=80 Identities=20% Similarity=0.191 Sum_probs=41.4
Q ss_pred cCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcE-EEEccCcc
Q 004752 249 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSL-AFVQFPQK 327 (732)
Q Consensus 249 ~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~v-g~VQ~Pq~ 327 (732)
+|++.|++-.. |. +-..-+---|+|...|-.--++.+|+++|+|++.. .|-..+.+..-.--+....+ |+.--|..
T Consensus 61 ~~~~~yl~~~s-~~-~F~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S-~dnF~k~l~~~~ikk~~tnI~a~~vlPV~ 137 (346)
T COG4092 61 MPRVLYLDFGS-PE-PFASETICANNGADYSHEKCESNLVLFLDVDCFGS-SDNFAKMLSIATIKKMRTNIDAPLVLPVY 137 (346)
T ss_pred ccceEEEecCC-Cc-cccchhhhhhccchhhhccccccEEEEEecccccc-HHHHHHHHHHHHHHHHHhccCcceeeeee
Confidence 46788886532 21 01111333455555532224689999999999987 44444444221100011123 45556777
Q ss_pred cccC
Q 004752 328 FHNI 331 (732)
Q Consensus 328 f~n~ 331 (732)
|-|-
T Consensus 138 ~LNk 141 (346)
T COG4092 138 HLNK 141 (346)
T ss_pred ecch
Confidence 7664
No 85
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=86.18 E-value=4 Score=44.89 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=27.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 308 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~ 308 (732)
++||+-.|=-++-.+. +...+||-++|||.+. |.++.+-+.
T Consensus 141 R~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk 181 (381)
T PF09488_consen 141 RNGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVK 181 (381)
T ss_dssp -SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHH
T ss_pred ecCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHH
Confidence 4789999888774421 1567999999999996 788876553
No 86
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=85.75 E-value=3.3 Score=45.51 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=31.4
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
+.||+-.|=-++-... +...+||-++|||.++ |.++.+-+.-|
T Consensus 142 R~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~y 184 (393)
T PRK14503 142 RSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIY 184 (393)
T ss_pred ecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHH
Confidence 4789888877764321 1467999999999997 57887766433
No 87
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=85.15 E-value=3.7 Score=44.87 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=31.1
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
+.||+-.|=-++-... +...+||-++|||.++ |.++.+-+.-|
T Consensus 141 R~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~y 183 (381)
T TIGR02460 141 RSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIY 183 (381)
T ss_pred ecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHH
Confidence 5789888877764321 1467999999999997 57777765433
No 88
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=80.50 E-value=12 Score=38.73 Aligned_cols=53 Identities=13% Similarity=-0.187 Sum_probs=35.9
Q ss_pred cchHHHHHHHHhCCCeEEEeCCCCC----ee------EeccCCChHHHhhhhhccccCccccc
Q 004752 443 SEDLFTGFILHCKGWTSTYLTPFRP----QF------LGTSTTNLNDLLIQGTRWGSGLTDVG 495 (732)
Q Consensus 443 tED~~t~~~l~~~Gwrsvy~~~~~~----~~------~g~aP~~l~~~~~Qr~RWa~G~~qi~ 495 (732)
.||-+.+.||..+|.+......... .- ....|.-+.....++.||+...+..+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 5999999999999988765543101 00 12344456666778899988888655
No 89
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=76.02 E-value=11 Score=45.41 Aligned_cols=43 Identities=19% Similarity=0.159 Sum_probs=31.7
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
+.||+-.|=-++-... +...+||-++|||.++ |.++.+-+.-|
T Consensus 146 r~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~y 188 (694)
T PRK14502 146 RSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHF 188 (694)
T ss_pred ecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHH
Confidence 5789988877764422 2577999999999997 57777766433
No 90
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=75.57 E-value=24 Score=34.89 Aligned_cols=37 Identities=27% Similarity=0.328 Sum_probs=29.0
Q ss_pred CCCchHHHHHHHHHHHc-----------CCCCCC---CeEEEEEcCCCCcc
Q 004752 107 EKEPAIGVMNTVLSAMA-----------LDYPVD---KLHVYLSDDGGSPI 143 (732)
Q Consensus 107 ynEp~~~v~~Tv~s~~~-----------~dYP~~---kl~v~v~DDg~~~~ 143 (732)
|||+...+.+|+.++++ -.+..| |+-|-|+-||....
T Consensus 2 YNEd~~ll~rTL~gv~~Ni~~l~~r~~s~~wG~d~WkkiVVcIv~DGr~ki 52 (163)
T PF01644_consen 2 YNEDEILLARTLHGVMKNIAHLCSRKRSKTWGKDAWKKIVVCIVSDGRAKI 52 (163)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCcCCcCCCCCCcEEEEEEEecCcccC
Confidence 99999999999999775 123322 78888999999864
No 91
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=75.25 E-value=33 Score=43.99 Aligned_cols=71 Identities=24% Similarity=0.323 Sum_probs=46.5
Q ss_pred CccchHHHHHHHHhCCCeEEEeCCCCCeeEeccCC-ChHHHhhhhhccccCcccccccccCccccCCCCCChhhHHH
Q 004752 441 SVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTT-NLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMC 516 (732)
Q Consensus 441 svtED~~t~~~l~~~Gwrsvy~~~~~~~~~g~aP~-~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~ 516 (732)
.++||+..|+.-..||-++.+|. -...|-.-+ .+.+-..=-..-+.|+=|..+||.-=-+ | .++.+..-+.
T Consensus 1173 nlsEDIfAG~n~tlRgG~itH~E---YiQvGKGRDvGlnqI~~FeaKia~G~GEQ~LSRd~YrL-G-~~ldffRmLS 1244 (1679)
T KOG0916|consen 1173 NLSEDIFAGFNATLRGGNITHHE---YIQVGKGRDVGLNQISNFEAKIANGNGEQTLSRDYYRL-G-TQLDFFRMLS 1244 (1679)
T ss_pred ccchHhhhhhhHHhhCCCcccce---eeecccccccCcchhhhhhhhhcCCCcchhhhHHHHHh-c-ccccHHHHHH
Confidence 78999999999999999998885 344444332 2333333345668999988888641111 3 3566655554
No 92
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=58.34 E-value=1e+02 Score=36.06 Aligned_cols=48 Identities=15% Similarity=0.154 Sum_probs=37.5
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 306 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~ 306 (732)
++.++..... .-.++.+|+.+++.. .+.+++.++|.|+..+ +++|.+.
T Consensus 315 ~i~~i~~~~~----~fsr~~~Ld~g~~~~---~~d~L~f~~Dvd~~f~-~~fL~rc 362 (499)
T PF05679_consen 315 RIKWISVKTG----EFSRGAALDVGAKKF---PPDSLLFFCDVDMVFT-SDFLNRC 362 (499)
T ss_pred ceEEEEecCC----CccHHHHHHhhcccC---CCCcEEEEEeCCcccC-HHHHHHH
Confidence 4667766421 467999999999863 4678999999999998 9999765
No 93
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=58.16 E-value=13 Score=40.65 Aligned_cols=45 Identities=27% Similarity=0.284 Sum_probs=32.3
Q ss_pred HHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE
Q 004752 273 NVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 322 (732)
Q Consensus 273 N~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 322 (732)
|.|+.. +..++|+++|+|++|. +++-.....+........+.++|
T Consensus 120 NvAr~~----a~T~~v~~~DvD~~ps-~~l~~~l~~~~~~~~~~~~~a~V 164 (317)
T PF13896_consen 120 NVARSG----ARTDYVFLLDVDFLPS-PGLYEKLLRFARRNIDKSKTAFV 164 (317)
T ss_pred HHHHHh----cCcceEEEecceeeeC-cchHHHHHHHhhhhccCCceEEE
Confidence 667777 8899999999999987 77766665544322234467777
No 94
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=50.81 E-value=39 Score=37.97 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=30.3
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 268 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 268 KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
....+-+|++. .+.|+|++.|||+-.-+++.+++++..+.
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~ 122 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALD 122 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhh
Confidence 45678888876 44599999999975445899988877554
No 95
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=49.60 E-value=21 Score=30.78 Aligned_cols=22 Identities=18% Similarity=-0.117 Sum_probs=15.5
Q ss_pred cchHHHHHHHHhCCCeEEEeCC
Q 004752 443 SEDLFTGFILHCKGWTSTYLTP 464 (732)
Q Consensus 443 tED~~t~~~l~~~Gwrsvy~~~ 464 (732)
-||.+.+.|+..+|.+....+.
T Consensus 46 ~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 46 GEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp SHHHHHHHHHHHTT---B-SST
T ss_pred ccHHHHHHHHHHcCCeEEecCC
Confidence 4999999999999998776553
No 96
>COG4097 Predicted ferric reductase [Inorganic ion transport and metabolism]
Probab=45.92 E-value=1e+02 Score=34.61 Aligned_cols=68 Identities=12% Similarity=0.166 Sum_probs=46.4
Q ss_pred CCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCc
Q 004752 93 KLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICP 172 (732)
Q Consensus 93 ~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p 172 (732)
.-|+|+.+-|+ .|+++.+-.+-+++.. +.-|. +++.++|.+.++.-..... +|++-++|.|
T Consensus 342 s~~~V~L~Y~~---~n~e~~~y~~eLr~~~-qkl~~--~~lHiiDSs~~g~l~~e~l-------------er~~~~~~~~ 402 (438)
T COG4097 342 SDPPVHLFYCS---RNWEEALYAEELRALA-QKLPN--VVLHIIDSSKDGYLDQEDL-------------ERYPDRPRTR 402 (438)
T ss_pred cCCceEEEEEe---cCCchhHHHHHHHHHH-hcCCC--eEEEEecCCCCCccCHHHh-------------hccccccCcc
Confidence 56899999999 9999777777777654 44465 6777766666553222111 3556678888
Q ss_pred ccccccC
Q 004752 173 QAYFSEA 179 (732)
Q Consensus 173 ~~yf~~~ 179 (732)
..||...
T Consensus 403 sv~fCGP 409 (438)
T COG4097 403 SVFFCGP 409 (438)
T ss_pred eEEEEcC
Confidence 8999765
No 97
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=45.72 E-value=46 Score=35.16 Aligned_cols=30 Identities=27% Similarity=0.343 Sum_probs=23.0
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004752 283 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (732)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (732)
++.+..+.+|-|++++ ++-|++.+.-+ ||.
T Consensus 85 ~~~~Wf~~~DDDtyv~-~~~L~~~L~~~-~~~ 114 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVN-VENLRRLLSKY-DPS 114 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS--TT
T ss_pred CCceEEEEEeCCceec-HHHHHHHHhhC-CCc
Confidence 4679999999999997 89998888766 443
No 98
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=41.47 E-value=3.9e+02 Score=28.02 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=34.8
Q ss_pred cCcEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEe--CCCCCCCchHHHHHHHHhhc
Q 004752 249 MPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGL--DCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 249 ~p~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~l--DAD~~~~~p~~L~~~v~~f~ 311 (732)
+|+++.+.++. +....++..+++.... ..+++++.+ |.|--+. .|+++++-.+..
T Consensus 84 ~p~~~i~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~RLDdDDAl~-~dFV~rlr~~a~ 140 (234)
T PF11316_consen 84 YPQFRIVFRPP------GPHRDAMRRAINAARR-DGADPVLQFRLDDDDALH-RDFVARLRRAAA 140 (234)
T ss_pred CCCcEEEecCC------chHHHHHHHHHhhhcc-CCCCEEEEEEECCcchhh-HHHHHHHHHHHH
Confidence 45555555432 3355777777743211 345666655 9987777 899988887764
No 99
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=40.77 E-value=2.4e+02 Score=29.02 Aligned_cols=59 Identities=7% Similarity=-0.031 Sum_probs=40.4
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEcc
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQF 324 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~ 324 (732)
-+....+.+++.......+.|.|++++||+-.-+|+.+.+++..|.+.+.+.-+..+..
T Consensus 76 ~~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 76 TGTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CCchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 45566677777652100246899999999987789999999988875434444555553
No 100
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=39.63 E-value=1.8e+02 Score=32.48 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=35.8
Q ss_pred CCceEEEEecCCCCCCchHHHHHHHHHHHcCCCC-CCCeEEEEEcCCCCcc
Q 004752 94 LPAIDVFICTADPEKEPAIGVMNTVLSAMALDYP-VDKLHVYLSDDGGSPI 143 (732)
Q Consensus 94 ~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP-~~kl~v~v~DDg~~~~ 143 (732)
.|.+-|+|=+| |-+ +.|++++..++.+. | ++|.-++|+-||+...
T Consensus 66 ~~v~pvvVf~c---sR~-~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~ 111 (411)
T KOG1413|consen 66 PPVIPVVVFAC---SRA-DALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEA 111 (411)
T ss_pred CCceeEEEEec---CcH-HHHHHHHHHHHHhC-cchhhcCEEEeccCCcHH
Confidence 34556666663 354 88999999999999 8 6799999999999863
No 101
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=31.51 E-value=2.2e+02 Score=33.10 Aligned_cols=44 Identities=16% Similarity=0.321 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCchHHHHHHHHHHHHHHHHhhh
Q 004752 686 LYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSI 729 (732)
Q Consensus 686 ~w~vv~l~p~~~al~~r~~~~~ip~~~~~~s~~l~~~~~~~~~~ 729 (732)
..=+++|..=.-|++.|+.+..+|.+-++.+++++++|+++.+.
T Consensus 138 afKLliLlig~WAlf~R~~~a~lPRif~fRa~ll~Lvfl~~~sy 181 (505)
T PF06638_consen 138 AFKLLILLIGTWALFFRRPRADLPRIFVFRALLLVLVFLFLFSY 181 (505)
T ss_pred HHHHHHHHHHHHHHhcCcccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 33345555555677889999999999999999999988875543
No 102
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=30.71 E-value=90 Score=34.84 Aligned_cols=36 Identities=33% Similarity=0.443 Sum_probs=26.4
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHH
Q 004752 269 AGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQA 306 (732)
Q Consensus 269 AGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~ 306 (732)
-.+|+.+++..+ +..+|+|++-|.|.+|+ |+.|+.+
T Consensus 164 R~~l~~l~~~~~-~~~dDliivSDvDEIP~-p~~l~~L 199 (356)
T PF04724_consen 164 RNALNGLLRLAG-IQDDDLIIVSDVDEIPS-PETLKFL 199 (356)
T ss_pred HHHHHHHhhhcC-CCCCCEEEEcCcccccC-HHHHHHH
Confidence 345655555544 37899999999999987 8887544
No 103
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=29.85 E-value=1.5e+02 Score=28.61 Aligned_cols=45 Identities=13% Similarity=-0.020 Sum_probs=34.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
..+-+.++..|++... .+.|.+++++||+-.-+++.+++++..+.
T Consensus 73 ~~G~~~~i~~al~~~~--~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 73 EEGMSSSLAAGLEALP--ADADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred hhCHHHHHHHHHHhcc--ccCCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 3577888999998732 13799999999993333889988887665
No 104
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=29.63 E-value=1.9e+02 Score=29.11 Aligned_cols=53 Identities=17% Similarity=0.151 Sum_probs=37.7
Q ss_pred EEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCC-CCCchHHHHHHHHhhcC
Q 004752 252 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDM-YCNDPTSARQAMCFHLD 312 (732)
Q Consensus 252 l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~-~~~~p~~L~~~v~~f~D 312 (732)
+.++.++. ..+.++++-+++.... .+.+.+++++||+ ... ++.+.+++..+.+
T Consensus 64 ~~~~~~~~-----~~g~~~ai~~a~~~~~--~~~~~vli~~~D~p~~~-~~~i~~l~~~~~~ 117 (229)
T cd02540 64 VEFVLQEE-----QLGTGHAVKQALPALK--DFEGDVLVLYGDVPLIT-PETLQRLLEAHRE 117 (229)
T ss_pred cEEEECCC-----CCCCHHHHHHHHHhhc--cCCCeEEEEeCCccccC-HHHHHHHHHHHHh
Confidence 45555432 3578999999998732 1268899999999 344 7888888877653
No 105
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=27.24 E-value=2.2e+02 Score=27.62 Aligned_cols=42 Identities=19% Similarity=0.247 Sum_probs=34.6
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
..+-.+.+..+++. .+.+.+++++||+-.-+++.+++++..+
T Consensus 68 ~~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 68 GKGPLAGILAALRA----APADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 45778899999998 5689999999999544589998888766
No 106
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=26.91 E-value=2.8e+02 Score=27.85 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=33.3
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
.+-.+++-.++.. .+.+++++++||+-.-+++.+++++..+.
T Consensus 78 ~G~~~si~~~l~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 78 QGPLVAFAQGLPQ----IKTEWVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred CChHHHHHHHHHh----CCCCcEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 4556778888877 56799999999997666899988887664
No 107
>KOG4179 consensus Lysyl hydrolase/glycosyltransferase family 25 [Posttranslational modification, protein turnover, chaperones]
Probab=25.14 E-value=2.7e+02 Score=31.66 Aligned_cols=36 Identities=28% Similarity=0.091 Sum_probs=28.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHH
Q 004752 268 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMC 308 (732)
Q Consensus 268 KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~ 308 (732)
|--|+|.|=.- -++||++.|+|.++.++|.|.-.+.
T Consensus 98 Keea~~~~r~~-----~adyilf~d~d~lLts~dTl~llm~ 133 (568)
T KOG4179|consen 98 KEEALNWARSG-----WADYILFKDEDNLLTSGDTLPLLMN 133 (568)
T ss_pred HHHHHHHHHhh-----hcceeEEeehhheeeCCchHhHHHh
Confidence 56677776543 4799999999999999999876664
No 108
>PLN03153 hypothetical protein; Provisional
Probab=24.52 E-value=3.6e+02 Score=31.74 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=24.8
Q ss_pred CCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004752 283 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (732)
Q Consensus 283 s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (732)
.+.+.++++|.|++.. ++-|.+.+.-+ |++
T Consensus 209 pd~kWfVf~DDDTyf~-~~NLv~~Ls~Y-Dpt 238 (537)
T PLN03153 209 PDVRWFVLGDDDTIFN-ADNLVAVLSKY-DPS 238 (537)
T ss_pred CCCCEEEEecCCcccc-HHHHHHHHhhc-CCC
Confidence 6889999999999997 88887777665 554
No 109
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=24.36 E-value=1.5e+02 Score=28.98 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=33.9
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
..+-.+++-+++.. .+.|.+++++||+-.-+++.+++++..+.
T Consensus 72 ~~g~~~si~~al~~----~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 114 (186)
T TIGR02665 72 FPGPLAGILAGLRW----AGTDWVLTVPCDTPFLPEDLVARLAAALE 114 (186)
T ss_pred CCCCHHHHHHHHHh----cCCCeEEEEecCCCcCCHHHHHHHHHHhh
Confidence 35678888888887 46789999999994334999998888764
No 110
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=23.25 E-value=2.1e+02 Score=27.80 Aligned_cols=43 Identities=14% Similarity=-0.039 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
.+-++++-.+++. ..+.+.+++++||+-.-+++.+++++..+.
T Consensus 74 ~g~~~si~~~l~~---~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 116 (188)
T TIGR03310 74 EGQSSSIKLGLEL---PVQSDGYLFLLGDQPFVTPDIIQLLLEAFA 116 (188)
T ss_pred cCHHHHHHHHhcC---CCCCCEEEEEeCCcCCCCHHHHHHHHHHHH
Confidence 4567778888872 156789999999994334899999887665
No 111
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=21.48 E-value=2.2e+02 Score=32.00 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=18.7
Q ss_pred HHHHHhhhcCCCCCchHHH-HHHHHHHHHHHHHhhhh
Q 004752 695 IVEGMIVRKDKGRISPSAI-LLSSVFFMIFLFFGSII 730 (732)
Q Consensus 695 ~~~al~~r~~~~~ip~~~~-~~s~~l~~~~~~~~~~~ 730 (732)
++.-+..|-+.++ .+|- -.|.+=|++|.++.+..
T Consensus 210 iVri~~~r~~nYk--~iV~yatslvDaLLfiHYlaVV 244 (531)
T KOG3814|consen 210 IVRILDERYRNYK--GIVQYATSLVDALLFIHYLAVV 244 (531)
T ss_pred hhhhhcccchhhH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555544443 2222 24677788888876543
No 112
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=20.49 E-value=2.5e+02 Score=30.89 Aligned_cols=35 Identities=14% Similarity=0.223 Sum_probs=26.0
Q ss_pred CCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHH
Q 004752 265 HHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 303 (732)
Q Consensus 265 ~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L 303 (732)
.+.+..=-|..+.. ++..++++=+||||+-. ++-|
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy~-~~KL 193 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIYD-TKKL 193 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceeec-HHHH
Confidence 34566667777765 25789999999999975 6554
No 113
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=20.13 E-value=1.7e+02 Score=29.13 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh
Q 004752 270 GALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH 310 (732)
Q Consensus 270 GaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f 310 (732)
.+++-+.+.. .+.+|++..|-|++++ ++.|.+.+.-.
T Consensus 69 ~~~~w~~~~c---~~~~~v~k~DDD~~vn-~~~l~~~L~~~ 105 (195)
T PF01762_consen 69 AGLKWASKHC---PNAKYVLKVDDDVFVN-PDRLVSFLKSL 105 (195)
T ss_pred HHHHHHHhhC---CchhheeecCcEEEEe-hHHhhhhhhhc
Confidence 4566666652 4589999999999997 87776655543
Done!