Query 004752
Match_columns 732
No_of_seqs 329 out of 1902
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 04:40:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004752.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004752hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xhba2 c.68.1.17 (A:95-422) P 99.8 6.7E-20 4.9E-24 193.3 13.1 119 91-314 18-136 (328)
2 d1qg8a_ c.68.1.1 (A:) Spore co 99.6 4.6E-15 3.3E-19 149.7 11.7 126 95-330 1-130 (255)
3 d1omza_ c.68.1.15 (A:) Alpha-1 99.3 1.4E-12 1.1E-16 127.1 7.0 106 95-312 3-108 (265)
4 d2bo4a1 c.68.1.18 (A:2-382) Ma 98.1 2.1E-05 1.6E-09 83.2 16.2 43 265-311 72-118 (381)
5 d1fo8a_ c.68.1.10 (A:) N-acety 92.3 0.15 1.1E-05 52.0 8.6 45 95-144 2-46 (343)
6 d1w55a1 c.68.1.13 (A:3-207) Is 61.2 3.7 0.00027 38.0 4.8 40 268-311 74-113 (205)
7 d1pzta_ c.68.1.2 (A:) beta 1,4 44.5 25 0.0019 33.6 8.0 34 266-299 95-128 (271)
8 d1eyra_ c.68.1.13 (A:) CMP acy 27.9 1.2E+02 0.009 26.1 9.7 53 268-322 82-134 (225)
9 d1qwja_ c.68.1.13 (A:) CMP acy 20.1 2.5E+02 0.018 24.1 10.2 56 267-325 80-135 (228)
10 d2idba2 d.333.1.1 (A:326-491) 17.2 1.1E+02 0.0082 26.5 6.6 60 251-314 39-99 (166)
No 1
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.80 E-value=6.7e-20 Score=193.34 Aligned_cols=119 Identities=18% Similarity=0.046 Sum_probs=95.5
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCcccc
Q 004752 91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI 170 (732)
Q Consensus 91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r 170 (732)
++.+|.|+|+||| |||....+.+||.|++++.||....||+|+||||+|.|.....|..
T Consensus 18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~------------------ 76 (328)
T d1xhba2 18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESY------------------ 76 (328)
T ss_dssp CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHH------------------
T ss_pred CCCCCCEEEEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHH------------------
Confidence 4678999999999 9998778999999999999997667999999999997653222210
Q ss_pred CcccccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcC
Q 004752 171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMP 250 (732)
Q Consensus 171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p 250 (732)
.+ ...+
T Consensus 77 -------------------------------~~-------------------------------------------~~~~ 82 (328)
T d1xhba2 77 -------------------------------VK-------------------------------------------KLKV 82 (328)
T ss_dssp -------------------------------HH-------------------------------------------SSSS
T ss_pred -------------------------------HH-------------------------------------------hcCC
Confidence 00 0012
Q ss_pred cEEEEecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004752 251 LLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (732)
Q Consensus 251 ~l~yv~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (732)
.+.++..++ +.|+++|.|.|++. ++||||+++|+|.++. |++|.+++..|.+..
T Consensus 83 ~i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~ 136 (328)
T d1xhba2 83 PVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR 136 (328)
T ss_dssp CEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT
T ss_pred CeEEEEecc-----cccchHHHHHHHHh----hhcceeeecCcccccC-hhHHHHHHHHHhcCC
Confidence 466665554 47899999999999 9999999999999997 999999999887543
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=99.56 E-value=4.6e-15 Score=149.70 Aligned_cols=126 Identities=14% Similarity=0.154 Sum_probs=94.8
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
|.|+|+||| |||+ ..+.+|+.|++.++||. ++|+|+|||++|.|.+.+.+. +++
T Consensus 1 P~vSiiip~---yN~~-~~l~~~l~Si~~Qt~~~--~eiivvdd~S~d~t~~~l~~~----------~~~---------- 54 (255)
T d1qg8a_ 1 PKVSVIMTS---YNKS-DYVAKSISSILSQTFSD--FELFIMDDNSNEETLNVIRPF----------LND---------- 54 (255)
T ss_dssp CCEEEEEEE---SSCT-TTHHHHHHHHHTCSCCC--EEEEEEECSCCHHHHHHHGGG----------GGS----------
T ss_pred CEEEEEEec---CCCH-HHHHHHHHHHHhCCCCC--eEEEEEECCCCccHHHHHHHh----------hhh----------
Confidence 899999999 9998 78999999999999996 999999999999776433211 000
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
+++.+
T Consensus 55 ---------------------------------------------------------------------------~~i~~ 59 (255)
T d1qg8a_ 55 ---------------------------------------------------------------------------NRVRF 59 (255)
T ss_dssp ---------------------------------------------------------------------------TTEEE
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 12333
Q ss_pred EecccC---CCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCcEEEEccCccccc
Q 004752 255 VSREKR---PEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHN 330 (732)
Q Consensus 255 v~Rekr---p~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n 330 (732)
+.-+.. ....+.++++|+|.|++. ++||||+++|+|..+. |++|.+++.+|. +| ++++|.+....++
T Consensus 60 ~~~~~~~~~~~~~~~g~~~a~N~gi~~----a~g~~i~~lD~Dd~~~-p~~l~~~~~~~~~~~----~~~~v~~~~~~~~ 130 (255)
T d1qg8a_ 60 YQSDISGVKERTEKTRYAALINQAIEM----AEGEYITYATDDNIYM-PDRLLKMVRELDTHP----EKAVIYSASKTYH 130 (255)
T ss_dssp EECCCCSHHHHHSSCHHHHHHHHHHHH----CCCSEEEEEETTEEEC-TTHHHHHHHHHHHCT----TCCEEEEEEEEEE
T ss_pred ccccccccccccccchhcccccccccc----cccccccccccccccc-cchHHHHHHHHHhCC----CCCeEeecceeee
Confidence 322100 000157899999999999 8999999999999987 999999999885 44 3667766554443
No 3
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.28 E-value=1.4e-12 Score=127.05 Aligned_cols=106 Identities=10% Similarity=0.017 Sum_probs=81.7
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchHhHHHHHHhhhcchhhhhhcCccccCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~ 174 (732)
-+.+|+||| |||+ +.+.+||.|+++++||. +++|+||+++|.|.+.+.+. ++
T Consensus 3 ~~~tvii~t---yn~~-~~l~~~l~sl~~q~~~~---~~iiV~d~~sd~~~~~i~~~-------------~~-------- 54 (265)
T d1omza_ 3 DSFTLIMQT---YNRT-DLLLRLLNHYQAVPSLH---KVIVVWNNVGEKGPEELWNS-------------LG-------- 54 (265)
T ss_dssp TCEEEEEEE---SSCH-HHHHHHHHHHTTSTTEE---EEEEEECCTTCCCTHHHHHH-------------TC--------
T ss_pred CcEEEEEEc---CCCH-HHHHHHHHHHHcCCCcC---eEEEEECCCCCccHHHHHHH-------------hc--------
Confidence 478999999 9998 89999999999999996 46777777777665422211 00
Q ss_pred ccccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCcchhhhhhhcccCcchhhhhccccCcCcEEE
Q 004752 175 YFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEQIIQETFGESETIRQADLVEMPLLVY 254 (732)
Q Consensus 175 yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~p~l~y 254 (732)
..+..++
T Consensus 55 -------------------------------------------------------------------------~~~~~~~ 61 (265)
T d1omza_ 55 -------------------------------------------------------------------------PHPIPVI 61 (265)
T ss_dssp -------------------------------------------------------------------------CCSSCEE
T ss_pred -------------------------------------------------------------------------ccceEEE
Confidence 0011222
Q ss_pred EecccCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcC
Q 004752 255 VSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLD 312 (732)
Q Consensus 255 v~Rekrp~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D 312 (732)
.. ++ +.|+++|+|.|++. ++||+|+++|+|.+++ |++|.+++..+.+
T Consensus 62 ~~-~~-----~~g~~~a~n~~~~~----a~ge~i~~lD~D~~~~-~~~l~~l~~~~~~ 108 (265)
T d1omza_ 62 FK-PQ-----TANKMRNRLQVFPE----VETNAVLMVDDDTLIS-AQDLVFAFSIWQQ 108 (265)
T ss_dssp EE-EC-----SSCCGGGGGSCCTT----CCSSEEEEECTTEEEC-HHHHHHHHHHHTT
T ss_pred Ee-cC-----CCCchhhhhhhHHh----CCcCEEEEeCcccCCC-HHHHHHHHHHHHh
Confidence 22 22 57899999999999 8999999999999997 9999999998864
No 4
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=98.10 E-value=2.1e-05 Score=83.22 Aligned_cols=43 Identities=19% Similarity=0.023 Sum_probs=32.8
Q ss_pred CCChHHHHHHHH----HhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 265 HHFKAGALNVLL----RVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 265 ~~~KAGaLN~~l----~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
+.+|..++..|+ +. ++||+|+++|||..-.+|+.+.+++....
T Consensus 72 ~~GKG~g~~~A~~~g~~~----a~gd~lvflDADl~~~~pe~i~~L~~~i~ 118 (381)
T d2bo4a1 72 RPGKGDGMNTALRYFLEE----TQWERIHFYDADITSFGPDWITKAEEAAD 118 (381)
T ss_dssp SSSHHHHHHHHHHHHHHH----CCCSEEEECCTTCSSCCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHh----CCCCEEEEEcCCcCcCCHHHHHHHHHHHh
Confidence 457776655555 55 89999999999976445999988887764
No 5
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=92.28 E-value=0.15 Score=52.02 Aligned_cols=45 Identities=13% Similarity=0.177 Sum_probs=36.7
Q ss_pred CceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccc
Q 004752 95 PAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPIT 144 (732)
Q Consensus 95 P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T 144 (732)
|-|-|+|-+ ||=| . +.+||.++++..-.+++..|||+.||+.+.+
T Consensus 2 ~viPVlv~a---~NRP-~-l~r~LesLlk~~p~~~~~~I~Vs~DG~~~~~ 46 (343)
T d1fo8a_ 2 AVIPILVIA---CDRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCEEEEE---SSCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CcccEEEEE---cCHH-H-HHHHHHHHHhcCccccCccEEEEecCCchhH
Confidence 456688889 8887 5 7999999998875577888999999998743
No 6
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]}
Probab=61.18 E-value=3.7 Score=38.02 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=31.5
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc
Q 004752 268 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL 311 (732)
Q Consensus 268 KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~ 311 (732)
....+-++++. .+.++|++.|||.-.-+++.+.+++....
T Consensus 74 r~~Sv~~gl~~----~~~~~VlIhd~~rP~i~~~~i~~li~~~~ 113 (205)
T d1w55a1 74 RAESLKKALEL----IDSEFVMVSDVARVLVSKNLFDRLIENLD 113 (205)
T ss_dssp HHHHHHHHHTT----CCSSEEEEEETTCTTCCHHHHHHHHTTGG
T ss_pred hhhhhhhhhhh----hhhcceeeeccCcccCcHHHHHHHHhhhh
Confidence 45667778887 68899999999985555888888887654
No 7
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}
Probab=44.45 E-value=25 Score=33.64 Aligned_cols=34 Identities=18% Similarity=0.015 Sum_probs=24.5
Q ss_pred CChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCc
Q 004752 266 HFKAGALNVLLRVSGVISNSPYILGLDCDMYCND 299 (732)
Q Consensus 266 ~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~ 299 (732)
-.|+..+|.|...+-...+.+++++-|.|++|.+
T Consensus 95 FNRg~llNiGf~~a~~~~~~~~~ifHDVDllP~~ 128 (271)
T d1pzta_ 95 FNRAKLLNVGFKEALKDYDYNCFVFSDVDLIPMN 128 (271)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESB
T ss_pred hhhhhhhhHHHHHhhhccCccEEEEecCCcCccc
Confidence 4588888887754211145788999999999874
No 8
>d1eyra_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Neisseria meningitidis [TaxId: 487]}
Probab=27.88 E-value=1.2e+02 Score=26.11 Aligned_cols=53 Identities=17% Similarity=0.065 Sum_probs=37.9
Q ss_pred hHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEE
Q 004752 268 KAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFV 322 (732)
Q Consensus 268 KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~V 322 (732)
.....-+++.... .+.++|+++.+|+-.-+++.+.+++..|.....+.-++..
T Consensus 82 ~~~~~~~~~~~~~--~~~d~ii~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~~~ 134 (225)
T d1eyra_ 82 SISGVIHALETIG--SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSAC 134 (225)
T ss_dssp HHHHHHHHHHHHT--CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEE
T ss_pred chhhccccccccc--cccceEEEeeccccccccccccccceeeccccccccceee
Confidence 3445555665543 5789999999999888899999999988755433334444
No 9
>d1qwja_ c.68.1.13 (A:) CMP acylneuraminate synthetase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.05 E-value=2.5e+02 Score=24.05 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCCCCCcEEEEccC
Q 004752 267 FKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFP 325 (732)
Q Consensus 267 ~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~~~~~vg~VQ~P 325 (732)
.....+.+++.. ..+.++++++.+|.-.-+|+.+.+++-.|.+.+.+.-++.++..
T Consensus 80 ~~~~~i~~~~~~---~~~~~~iv~~~~~~P~~~~~~I~~~i~~~~~~~~d~~~~~~~~~ 135 (228)
T d1qwja_ 80 TSLDAIVEFLNY---HNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRRH 135 (228)
T ss_dssp CHHHHHHHHHTT---CTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEEC
T ss_pred hhhhhhhhcccc---ccccceeeeecccccccCchhhhhhhhhhhccCccccccccccc
Confidence 445556666653 24688999999998777799999999888765444334444443
No 10
>d2idba2 d.333.1.1 (A:326-491) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {Escherichia coli [TaxId: 562]}
Probab=17.25 E-value=1.1e+02 Score=26.51 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=40.3
Q ss_pred cEEEEecccC-CCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004752 251 LLVYVSREKR-PEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK 314 (732)
Q Consensus 251 ~l~yv~Rekr-p~~~~~~KAGaLN~~l~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~ 314 (732)
++.+++-+|+ || ++| -++++++...+.++...+++++|.|--+.|++.+..++..-.||+
T Consensus 39 ~~~vvsI~k~~pg---~a~-~~~~a~~~~~~~~~~~K~vivVD~Didi~d~~~v~wa~~tR~dp~ 99 (166)
T d2idba2 39 RLAVVTIKKQYAG---HAK-RVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPA 99 (166)
T ss_dssp SEEEEEECCCSTT---HHH-HHHHHHHHSSGGGSSCCEEEEEETTSCTTCHHHHHHHHHHSCCHH
T ss_pred eEEEEEEEeCCcc---HHH-HHHHHHHHhccccceeEEEEEeCCCCCcccHHHHHHHHHHccCcc
Confidence 4566666554 32 222 234555554444567899999999988888888888887766775
Done!