Query 004754
Match_columns 732
No_of_seqs 308 out of 1663
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 12:21:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004754.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004754hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 8.9E-43 1.9E-47 391.3 46.4 446 4-722 9-472 (485)
2 TIGR00887 2A0109 phosphate:H+ 100.0 1.6E-38 3.4E-43 359.5 45.6 443 3-717 13-501 (502)
3 KOG0254 Predicted transporter 100.0 1E-38 2.2E-43 363.0 41.8 447 4-724 43-503 (513)
4 PRK10077 xylE D-xylose transpo 100.0 2.3E-37 4.9E-42 344.4 47.4 436 4-724 10-477 (479)
5 TIGR01299 synapt_SV2 synaptic 100.0 2.1E-37 4.6E-42 365.5 49.2 207 3-212 164-381 (742)
6 TIGR00879 SP MFS transporter, 100.0 5.7E-35 1.2E-39 318.3 40.1 442 3-714 25-480 (481)
7 PF00083 Sugar_tr: Sugar (and 100.0 1.2E-42 2.6E-47 384.3 -21.1 434 9-719 3-451 (451)
8 PRK10642 proline/glycine betai 100.0 1.9E-32 4.1E-37 309.4 46.2 187 5-192 15-219 (490)
9 TIGR00898 2A0119 cation transp 100.0 5.5E-33 1.2E-37 312.5 31.8 176 27-210 110-288 (505)
10 PRK11551 putative 3-hydroxyphe 100.0 2.7E-31 5.9E-36 289.5 43.7 186 2-191 11-196 (406)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.9E-32 1.9E-36 297.5 39.3 185 4-190 6-194 (412)
12 PRK11663 regulatory protein Uh 100.0 4.6E-31 9.9E-36 293.2 40.9 183 4-190 21-203 (434)
13 PRK09556 uhpT sugar phosphate 100.0 1.3E-31 2.8E-36 300.3 36.3 185 4-190 27-217 (467)
14 PRK12307 putative sialic acid 100.0 2E-30 4.3E-35 284.5 42.1 168 3-174 15-182 (426)
15 PRK10406 alpha-ketoglutarate t 100.0 6.8E-30 1.5E-34 283.4 45.2 187 3-190 19-223 (432)
16 KOG0253 Synaptic vesicle trans 100.0 2.5E-31 5.5E-36 284.0 31.6 441 3-712 75-527 (528)
17 TIGR00893 2A0114 d-galactonate 100.0 1.7E-30 3.8E-35 275.0 37.3 171 15-189 3-173 (399)
18 TIGR00891 2A0112 putative sial 100.0 7.8E-30 1.7E-34 274.4 42.9 186 3-191 9-194 (405)
19 COG2271 UhpC Sugar phosphate p 100.0 6.5E-31 1.4E-35 286.8 31.8 406 2-705 25-435 (448)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 5.1E-30 1.1E-34 271.6 37.3 178 5-188 3-180 (377)
21 PRK14995 methyl viologen resis 100.0 7.9E-29 1.7E-33 280.5 47.6 185 1-189 1-186 (495)
22 PRK03545 putative arabinose tr 100.0 8.9E-29 1.9E-33 269.8 45.1 182 3-188 6-187 (390)
23 PRK09952 shikimate transporter 100.0 4.1E-29 8.8E-34 278.5 42.9 185 3-191 19-225 (438)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 6.8E-29 1.5E-33 277.3 42.1 184 3-190 26-213 (452)
25 TIGR00903 2A0129 major facilit 100.0 9.4E-29 2E-33 270.9 40.7 168 19-191 4-171 (368)
26 PRK03893 putative sialic acid 100.0 2.9E-28 6.4E-33 272.9 43.6 184 3-191 17-200 (496)
27 COG2814 AraJ Arabinose efflux 100.0 3.4E-28 7.3E-33 267.2 42.9 180 3-186 10-189 (394)
28 PRK09705 cynX putative cyanate 100.0 3.3E-28 7.1E-33 267.1 42.7 166 5-176 9-175 (393)
29 TIGR00895 2A0115 benzoate tran 100.0 1.3E-28 2.7E-33 263.4 37.7 187 3-193 14-200 (398)
30 KOG0252 Inorganic phosphate tr 100.0 8.5E-31 1.9E-35 287.1 21.1 447 2-722 37-515 (538)
31 PRK15075 citrate-proton sympor 100.0 1.1E-27 2.4E-32 265.9 42.8 167 4-172 13-199 (434)
32 TIGR00712 glpT glycerol-3-phos 100.0 4.9E-28 1.1E-32 269.1 35.9 183 4-190 25-211 (438)
33 PRK10091 MFS transport protein 100.0 6E-27 1.3E-31 255.3 42.5 177 8-188 5-181 (382)
34 TIGR00711 efflux_EmrB drug res 100.0 5.2E-27 1.1E-31 261.0 40.8 180 6-189 2-181 (485)
35 TIGR00881 2A0104 phosphoglycer 100.0 2.2E-28 4.8E-33 259.3 28.2 174 13-189 2-175 (379)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 8.3E-28 1.8E-32 268.4 33.0 185 2-190 15-224 (465)
37 PRK10213 nepI ribonucleoside t 100.0 6.3E-26 1.4E-30 249.6 45.6 183 2-188 16-198 (394)
38 PRK15402 multidrug efflux syst 100.0 5E-26 1.1E-30 249.2 44.4 183 3-189 10-192 (406)
39 PRK05122 major facilitator sup 100.0 2.9E-26 6.3E-31 249.8 41.2 168 5-176 14-190 (399)
40 PRK03699 putative transporter; 100.0 2.7E-26 5.7E-31 251.3 40.1 175 3-180 4-178 (394)
41 PRK10504 putative transporter; 100.0 1.9E-25 4E-30 249.3 46.8 178 7-188 11-188 (471)
42 PRK10489 enterobactin exporter 100.0 2.6E-26 5.7E-31 252.5 39.2 384 12-717 23-412 (417)
43 PRK12382 putative transporter; 100.0 5.8E-26 1.3E-30 247.2 41.4 166 6-175 15-189 (392)
44 TIGR00710 efflux_Bcr_CflA drug 100.0 1.2E-25 2.6E-30 241.2 43.1 179 7-189 6-184 (385)
45 TIGR00900 2A0121 H+ Antiporter 100.0 9.5E-26 2E-30 238.4 40.4 166 11-180 4-174 (365)
46 PLN00028 nitrate transmembrane 100.0 4.5E-26 9.8E-31 257.2 40.2 182 5-189 35-223 (476)
47 KOG0255 Synaptic vesicle trans 100.0 2E-26 4.3E-31 261.7 36.8 165 41-211 116-280 (521)
48 PRK03633 putative MFS family t 100.0 2.9E-25 6.2E-30 241.8 43.5 149 1-151 1-149 (381)
49 TIGR00899 2A0120 sugar efflux 100.0 1.6E-25 3.5E-30 239.7 40.8 173 13-189 4-180 (375)
50 TIGR00892 2A0113 monocarboxyla 100.0 3.9E-26 8.4E-31 256.1 35.1 179 3-186 16-195 (455)
51 PRK09874 drug efflux system pr 100.0 4.7E-25 1E-29 239.6 42.4 175 9-188 17-196 (408)
52 TIGR00897 2A0118 polyol permea 100.0 6.5E-25 1.4E-29 241.2 43.8 176 8-187 15-195 (402)
53 cd06174 MFS The Major Facilita 100.0 2.6E-25 5.5E-30 232.6 38.2 346 10-701 3-349 (352)
54 TIGR00883 2A0106 metabolite-pr 100.0 9.1E-26 2E-30 240.6 34.7 174 15-189 2-194 (394)
55 PF07690 MFS_1: Major Facilita 100.0 8.5E-26 1.8E-30 238.1 32.7 174 12-189 2-176 (352)
56 PRK15034 nitrate/nitrite trans 100.0 1.5E-24 3.3E-29 244.3 43.7 181 5-188 33-235 (462)
57 PRK10473 multidrug efflux syst 100.0 3.6E-24 7.7E-29 233.2 44.4 172 13-188 10-181 (392)
58 PRK11102 bicyclomycin/multidru 99.9 4.8E-24 1E-28 229.6 40.8 165 20-188 5-169 (377)
59 PRK15403 multidrug efflux syst 99.9 1.6E-23 3.6E-28 232.0 46.0 180 6-189 16-195 (413)
60 PRK11043 putative transporter; 99.9 2.5E-23 5.4E-28 227.2 45.2 176 8-188 8-183 (401)
61 PRK15011 sugar efflux transpor 99.9 2.1E-23 4.6E-28 228.6 42.2 177 8-189 17-198 (393)
62 PRK11010 ampG muropeptide tran 99.9 4.8E-23 1E-27 233.9 44.1 175 8-189 14-198 (491)
63 PRK10054 putative transporter; 99.9 2.4E-23 5.3E-28 229.1 40.2 172 12-188 13-185 (395)
64 PRK11652 emrD multidrug resist 99.9 1.4E-22 3E-27 220.9 43.5 183 3-189 5-187 (394)
65 PRK11646 multidrug resistance 99.9 1.3E-22 2.7E-27 223.8 43.0 171 12-187 16-187 (400)
66 PRK10133 L-fucose transporter; 99.9 1.5E-22 3.3E-27 226.6 43.5 148 4-153 24-174 (438)
67 PRK11195 lysophospholipid tran 99.9 2.2E-22 4.8E-27 221.4 42.5 171 10-189 7-177 (393)
68 TIGR00885 fucP L-fucose:H+ sym 99.9 2E-22 4.3E-27 223.8 41.7 171 8-180 5-202 (410)
69 COG2223 NarK Nitrate/nitrite t 99.9 1.7E-23 3.7E-28 229.0 31.4 383 4-704 12-401 (417)
70 TIGR00886 2A0108 nitrite extru 99.9 3E-23 6.4E-28 221.9 32.8 177 10-189 5-192 (366)
71 KOG1330 Sugar transporter/spin 99.9 1.5E-25 3.2E-30 247.0 15.2 185 1-189 28-213 (493)
72 KOG2532 Permease of the major 99.9 3.1E-23 6.8E-28 234.3 33.7 153 34-190 66-221 (466)
73 PRK08633 2-acyl-glycerophospho 99.9 2.7E-22 5.8E-27 246.8 41.9 168 23-190 27-204 (1146)
74 PRK11902 ampG muropeptide tran 99.9 2E-21 4.4E-26 213.3 44.3 172 11-189 4-185 (402)
75 TIGR00896 CynX cyanate transpo 99.9 3E-22 6.5E-27 215.2 36.6 150 23-176 17-166 (355)
76 TIGR00902 2A0127 phenyl propri 99.9 2.3E-21 5E-26 211.7 41.3 157 11-173 9-167 (382)
77 KOG2533 Permease of the major 99.9 8E-23 1.7E-27 232.2 26.3 184 5-190 44-232 (495)
78 TIGR00889 2A0110 nucleoside tr 99.9 4.1E-21 8.8E-26 213.6 39.3 175 529-710 227-408 (418)
79 PRK09528 lacY galactoside perm 99.9 3.3E-21 7.1E-26 212.6 37.4 140 558-706 265-405 (420)
80 KOG2504 Monocarboxylate transp 99.9 1.5E-22 3.3E-27 231.1 27.6 182 3-189 43-225 (509)
81 PTZ00207 hypothetical protein; 99.9 5.5E-21 1.2E-25 221.1 40.2 196 3-206 25-228 (591)
82 PRK11128 putative 3-phenylprop 99.9 1.7E-20 3.8E-25 204.6 40.9 154 15-176 13-170 (382)
83 TIGR00882 2A0105 oligosacchari 99.9 1.3E-20 2.9E-25 206.0 39.2 172 10-188 6-186 (396)
84 PRK06814 acylglycerophosphoeth 99.9 6.1E-21 1.3E-25 235.8 40.4 178 7-188 16-197 (1140)
85 TIGR00792 gph sugar (Glycoside 99.9 4.8E-21 1E-25 210.7 34.8 173 14-188 7-197 (437)
86 TIGR00901 2A0125 AmpG-related 99.9 3.1E-20 6.8E-25 199.4 34.3 161 22-188 4-181 (356)
87 TIGR02718 sider_RhtX_FptX side 99.9 4.8E-19 1E-23 193.4 41.8 175 8-186 3-185 (390)
88 TIGR00805 oat sodium-independe 99.9 1.4E-20 3.1E-25 220.3 27.5 179 7-188 34-283 (633)
89 TIGR00924 yjdL_sub1_fam amino 99.9 1E-18 2.2E-23 197.9 41.3 165 9-177 13-184 (475)
90 PF06609 TRI12: Fungal trichot 99.9 1.5E-18 3.3E-23 200.3 43.1 172 10-187 48-220 (599)
91 PF05977 MFS_3: Transmembrane 99.9 4.6E-18 1E-22 195.1 42.4 163 10-176 14-181 (524)
92 PRK10207 dipeptide/tripeptide 99.9 2E-18 4.3E-23 196.6 38.6 173 9-186 17-194 (489)
93 TIGR00806 rfc RFC reduced fola 99.9 6.3E-19 1.4E-23 197.7 33.2 163 21-189 41-206 (511)
94 COG0738 FucP Fucose permease [ 99.8 2.3E-17 5E-22 180.3 37.2 171 6-178 13-203 (422)
95 PRK09584 tppB putative tripept 99.8 4.3E-17 9.3E-22 186.0 40.2 162 11-176 26-192 (500)
96 COG2807 CynX Cyanate permease 99.8 3E-17 6.6E-22 177.2 36.3 163 11-179 17-180 (395)
97 TIGR01301 GPH_sucrose GPH fami 99.8 8.3E-17 1.8E-21 182.7 40.3 170 18-189 16-222 (477)
98 PRK09669 putative symporter Ya 99.8 1.5E-16 3.2E-21 177.6 35.7 174 12-187 15-206 (444)
99 PRK10429 melibiose:sodium symp 99.8 2.4E-16 5.3E-21 177.8 36.5 178 9-188 9-204 (473)
100 TIGR00788 fbt folate/biopterin 99.8 1E-16 2.2E-21 181.5 29.5 175 6-188 26-211 (468)
101 PF11700 ATG22: Vacuole efflux 99.8 9.1E-15 2E-19 166.3 43.9 177 524-711 295-474 (477)
102 PF03825 Nuc_H_symport: Nucleo 99.8 5.7E-15 1.2E-19 164.5 41.5 171 14-189 10-183 (400)
103 KOG3764 Vesicular amine transp 99.8 2.5E-18 5.5E-23 186.9 13.7 146 41-188 104-250 (464)
104 KOG2615 Permease of the major 99.8 9.9E-17 2.1E-21 173.7 23.2 111 41-152 66-176 (451)
105 PRK09848 glucuronide transport 99.7 8.2E-15 1.8E-19 163.6 36.3 130 12-143 14-157 (448)
106 PF13347 MFS_2: MFS/sugar tran 99.7 1.6E-15 3.5E-20 168.5 29.3 159 27-187 23-200 (428)
107 PRK11462 putative transporter; 99.7 3.8E-14 8.2E-19 160.1 38.1 174 12-187 15-206 (460)
108 PRK15462 dipeptide/tripeptide 99.7 1.8E-13 3.9E-18 156.2 42.4 156 17-176 20-180 (493)
109 PF01306 LacY_symp: LacY proto 99.6 2.5E-13 5.4E-18 151.3 31.9 145 556-709 260-405 (412)
110 KOG2563 Permease of the major 99.6 3.9E-14 8.6E-19 156.7 24.1 186 2-190 41-240 (480)
111 COG2211 MelB Na+/melibiose sym 99.6 5E-12 1.1E-16 142.4 36.0 177 10-188 16-210 (467)
112 COG2270 Permeases of the major 99.6 1.6E-12 3.5E-17 143.3 28.8 169 524-711 266-435 (438)
113 PRK10642 proline/glycine betai 99.6 3.9E-13 8.5E-18 152.4 24.7 183 22-209 266-458 (490)
114 KOG4686 Predicted sugar transp 99.5 1.7E-14 3.6E-19 151.2 10.5 144 3-148 41-188 (459)
115 TIGR01272 gluP glucose/galacto 99.5 3.4E-12 7.3E-17 137.2 28.5 152 519-689 149-300 (310)
116 TIGR00880 2_A_01_02 Multidrug 99.5 3.5E-13 7.6E-18 122.5 13.3 138 49-188 4-141 (141)
117 KOG2325 Predicted transporter/ 99.5 1E-12 2.2E-17 148.5 17.3 186 3-189 31-233 (488)
118 KOG3626 Organic anion transpor 99.4 1.6E-11 3.5E-16 143.9 24.1 180 6-188 97-345 (735)
119 TIGR00889 2A0110 nucleoside tr 99.4 4.5E-11 9.8E-16 133.3 21.8 161 26-188 228-405 (418)
120 PRK09528 lacY galactoside perm 99.4 2.9E-11 6.3E-16 133.7 19.4 147 41-189 260-407 (420)
121 TIGR01299 synapt_SV2 synaptic 99.3 1E-10 2.2E-15 139.6 24.6 160 528-707 185-357 (742)
122 PF03137 OATP: Organic Anion T 99.3 8.9E-14 1.9E-18 160.4 -1.6 145 9-155 6-200 (539)
123 COG3104 PTR2 Dipeptide/tripept 99.3 1.3E-09 2.9E-14 122.7 31.5 148 28-179 44-200 (498)
124 cd06174 MFS The Major Facilita 99.3 9.2E-11 2E-15 122.8 21.1 165 12-180 181-347 (352)
125 TIGR00890 2A0111 Oxalate/Forma 99.3 6.3E-11 1.4E-15 125.8 18.8 151 23-177 222-374 (377)
126 TIGR00710 efflux_Bcr_CflA drug 99.3 1.2E-10 2.6E-15 125.1 20.3 169 523-710 18-186 (385)
127 PRK11663 regulatory protein Uh 99.3 1.2E-10 2.6E-15 130.0 20.7 181 508-707 21-201 (434)
128 TIGR00895 2A0115 benzoate tran 99.3 4.1E-11 8.9E-16 128.4 16.1 165 525-708 32-196 (398)
129 PRK15011 sugar efflux transpor 99.3 4.7E-10 1E-14 123.3 23.3 155 27-187 237-392 (393)
130 PRK05122 major facilitator sup 99.3 4.3E-10 9.3E-15 122.9 22.8 158 25-188 235-392 (399)
131 PRK10473 multidrug efflux syst 99.3 2.4E-10 5.1E-15 124.8 20.1 182 510-710 3-184 (392)
132 PRK03545 putative arabinose tr 99.3 3.5E-10 7.7E-15 123.7 21.4 159 531-708 30-188 (390)
133 TIGR00879 SP MFS transporter, 99.3 1.4E-10 3E-15 126.8 18.2 178 8-189 286-474 (481)
134 TIGR00711 efflux_EmrB drug res 99.3 9.1E-11 2E-15 130.9 16.3 179 513-710 5-183 (485)
135 PRK12382 putative transporter; 99.3 5.1E-10 1.1E-14 122.2 21.6 157 23-185 233-389 (392)
136 KOG2816 Predicted transporter 99.2 3.4E-09 7.4E-14 120.4 28.5 176 5-188 21-202 (463)
137 PRK10213 nepI ribonucleoside t 99.2 6.4E-10 1.4E-14 122.8 22.2 158 532-708 42-199 (394)
138 TIGR00893 2A0114 d-galactonate 99.2 1.8E-10 4E-15 122.2 16.8 164 527-709 11-174 (399)
139 PF03209 PUCC: PUCC protein; 99.2 6E-08 1.3E-12 107.5 36.9 118 32-152 6-145 (403)
140 PRK10054 putative transporter; 99.2 4.7E-10 1E-14 123.9 20.6 168 522-708 19-186 (395)
141 PRK09874 drug efflux system pr 99.2 5.3E-10 1.1E-14 121.8 20.5 161 24-186 237-399 (408)
142 PRK11551 putative 3-hydroxyphe 99.2 8.7E-10 1.9E-14 120.6 22.0 154 25-182 239-393 (406)
143 TIGR02332 HpaX 4-hydroxyphenyl 99.2 4.2E-10 9.1E-15 125.0 19.8 181 510-709 8-194 (412)
144 PRK09556 uhpT sugar phosphate 99.2 7.5E-10 1.6E-14 124.7 22.0 169 9-181 261-445 (467)
145 PRK10077 xylE D-xylose transpo 99.2 9.7E-10 2.1E-14 122.9 22.4 163 25-189 290-461 (479)
146 PRK14995 methyl viologen resis 99.2 5.7E-10 1.2E-14 127.0 20.8 181 510-709 6-187 (495)
147 PRK10504 putative transporter; 99.2 8.6E-10 1.9E-14 123.6 20.7 175 515-708 15-189 (471)
148 TIGR00891 2A0112 putative sial 99.2 1.1E-09 2.4E-14 118.1 20.8 180 510-709 12-193 (405)
149 TIGR00899 2A0120 sugar efflux 99.2 2E-09 4.3E-14 115.6 22.5 150 31-186 225-374 (375)
150 PLN00028 nitrate transmembrane 99.2 2E-09 4.3E-14 122.2 23.3 179 506-705 33-220 (476)
151 PRK03893 putative sialic acid 99.2 1.1E-09 2.4E-14 123.2 20.7 194 494-708 5-198 (496)
152 TIGR00881 2A0104 phosphoglycer 99.2 2.3E-10 5E-15 121.6 13.9 164 526-708 11-175 (379)
153 PRK15403 multidrug efflux syst 99.2 1.6E-09 3.5E-14 120.5 20.7 153 547-709 44-196 (413)
154 TIGR00900 2A0121 H+ Antiporter 99.2 1.9E-09 4E-14 114.3 20.0 163 526-702 15-177 (365)
155 PRK10091 MFS transport protein 99.2 1.6E-09 3.5E-14 118.5 19.9 164 527-709 20-183 (382)
156 PRK10489 enterobactin exporter 99.2 2E-09 4.2E-14 118.9 20.6 159 26-188 243-402 (417)
157 PF07690 MFS_1: Major Facilita 99.2 6.4E-10 1.4E-14 117.4 15.8 151 548-708 26-176 (352)
158 PRK12307 putative sialic acid 99.2 1.9E-09 4E-14 118.8 19.9 175 514-708 22-196 (426)
159 PRK03633 putative MFS family t 99.1 4.4E-09 9.6E-14 114.9 22.6 148 26-180 220-367 (381)
160 PRK15402 multidrug efflux syst 99.1 2.2E-09 4.9E-14 117.9 20.2 151 549-709 43-193 (406)
161 TIGR00883 2A0106 metabolite-pr 99.1 2.1E-09 4.6E-14 114.8 19.0 157 15-175 228-391 (394)
162 PRK11102 bicyclomycin/multidru 99.1 1.6E-09 3.5E-14 116.9 18.1 162 529-709 10-171 (377)
163 TIGR00902 2A0127 phenyl propri 99.1 6.4E-09 1.4E-13 113.9 22.5 152 22-179 221-373 (382)
164 TIGR00897 2A0118 polyol permea 99.1 7.3E-09 1.6E-13 114.3 23.0 164 14-183 230-399 (402)
165 PRK11652 emrD multidrug resist 99.1 4.2E-09 9.2E-14 115.1 20.7 182 508-709 7-188 (394)
166 TIGR00903 2A0129 major facilit 99.1 2E-09 4.4E-14 118.5 18.2 163 527-709 8-170 (368)
167 COG2814 AraJ Arabinose efflux 99.1 6.5E-09 1.4E-13 115.4 21.3 162 525-705 28-189 (394)
168 TIGR00892 2A0113 monocarboxyla 99.1 2.3E-09 5E-14 120.8 18.0 160 15-178 250-414 (455)
169 PF03092 BT1: BT1 family; Int 99.1 1.6E-08 3.5E-13 114.0 24.6 157 26-187 10-177 (433)
170 TIGR00712 glpT glycerol-3-phos 99.1 3.2E-09 7E-14 118.5 18.7 153 550-708 57-210 (438)
171 PRK11646 multidrug resistance 99.1 6.5E-09 1.4E-13 115.1 20.8 164 525-707 25-188 (400)
172 PRK09952 shikimate transporter 99.1 1.9E-08 4.2E-13 112.7 24.4 156 30-188 275-435 (438)
173 PRK09705 cynX putative cyanate 99.1 1E-08 2.3E-13 113.0 21.9 164 20-189 219-385 (393)
174 PRK15462 dipeptide/tripeptide 99.1 6.1E-09 1.3E-13 119.3 20.6 174 509-700 9-185 (493)
175 TIGR00886 2A0108 nitrite extru 99.1 6.2E-09 1.3E-13 111.6 19.5 167 523-707 14-191 (366)
176 TIGR00880 2_A_01_02 Multidrug 99.1 2.2E-09 4.9E-14 97.4 13.8 135 564-707 7-141 (141)
177 PRK03699 putative transporter; 99.1 9.5E-09 2.1E-13 112.9 21.3 163 13-180 212-375 (394)
178 TIGR00924 yjdL_sub1_fam amino 99.0 1.5E-08 3.2E-13 115.3 19.9 164 519-699 19-187 (475)
179 PRK11273 glpT sn-glycerol-3-ph 99.0 4E-08 8.6E-13 110.4 22.7 168 13-184 260-434 (452)
180 TIGR00882 2A0105 oligosacchari 99.0 2.8E-08 6.1E-13 109.0 20.9 141 41-183 252-393 (396)
181 PRK11043 putative transporter; 99.0 3.4E-08 7.3E-13 108.3 21.5 146 548-703 35-180 (401)
182 TIGR00887 2A0109 phosphate:H+ 99.0 1.4E-08 2.9E-13 115.8 19.0 161 25-188 307-491 (502)
183 COG2271 UhpC Sugar phosphate p 99.0 7.3E-09 1.6E-13 114.8 16.0 186 507-711 26-216 (448)
184 PRK15075 citrate-proton sympor 99.0 4.7E-08 1E-12 109.1 22.8 143 18-164 250-398 (434)
185 PRK08633 2-acyl-glycerophospho 99.0 2E-08 4.3E-13 124.6 20.6 156 29-187 256-412 (1146)
186 PRK15034 nitrate/nitrite trans 99.0 5.5E-08 1.2E-12 110.6 22.3 188 507-708 31-236 (462)
187 PRK11128 putative 3-phenylprop 99.0 7.4E-08 1.6E-12 105.5 22.6 145 28-178 227-372 (382)
188 PF05977 MFS_3: Transmembrane 99.0 3.3E-08 7.2E-13 114.2 20.7 155 23-181 235-390 (524)
189 TIGR00792 gph sugar (Glycoside 99.0 4.1E-08 9E-13 108.3 20.3 114 41-154 255-376 (437)
190 PRK09584 tppB putative tripept 98.9 6.8E-08 1.5E-12 110.7 22.3 169 511-697 23-194 (500)
191 PRK11195 lysophospholipid tran 98.9 4.2E-08 9.2E-13 108.4 19.6 140 555-708 38-177 (393)
192 PRK10207 dipeptide/tripeptide 98.9 6.3E-08 1.4E-12 110.9 20.2 168 508-694 13-184 (489)
193 PRK06814 acylglycerophosphoeth 98.9 5.8E-08 1.3E-12 121.0 21.4 147 555-708 52-198 (1140)
194 PF11700 ATG22: Vacuole efflux 98.9 1.5E-07 3.2E-12 107.7 22.7 166 17-187 294-469 (477)
195 PRK11010 ampG muropeptide tran 98.9 1.6E-07 3.4E-12 107.4 22.9 155 28-187 245-404 (491)
196 TIGR00894 2A0114euk Na(+)-depe 98.9 2.2E-08 4.8E-13 112.3 15.0 152 548-707 70-222 (465)
197 PRK10406 alpha-ketoglutarate t 98.9 2.9E-07 6.3E-12 102.7 23.3 157 26-187 263-425 (432)
198 COG0477 ProP Permeases of the 98.9 2.6E-07 5.7E-12 92.0 20.0 164 11-176 7-176 (338)
199 TIGR02718 sider_RhtX_FptX side 98.8 2.5E-07 5.3E-12 101.4 21.4 148 28-179 230-385 (390)
200 TIGR00898 2A0119 cation transp 98.8 1.1E-07 2.4E-12 107.5 19.1 135 49-188 361-497 (505)
201 PF06609 TRI12: Fungal trichot 98.8 5.3E-08 1.1E-12 113.5 16.0 153 531-704 65-217 (599)
202 PF01770 Folate_carrier: Reduc 98.8 3.7E-06 8E-11 94.1 29.4 160 27-190 25-186 (412)
203 TIGR00885 fucP L-fucose:H+ sym 98.8 3.3E-07 7.2E-12 102.3 20.5 161 530-706 23-210 (410)
204 PF05631 DUF791: Protein of un 98.8 6.2E-06 1.3E-10 90.5 29.2 153 31-188 59-219 (354)
205 KOG0569 Permease of the major 98.8 6.1E-07 1.3E-11 102.4 21.9 159 25-188 289-457 (485)
206 TIGR00901 2A0125 AmpG-related 98.8 2.1E-07 4.4E-12 100.3 17.1 117 24-142 227-355 (356)
207 PF06813 Nodulin-like: Nodulin 98.8 3.9E-07 8.4E-12 96.0 18.6 143 4-151 1-150 (250)
208 COG2270 Permeases of the major 98.8 2.8E-07 6.1E-12 102.5 18.2 181 3-188 251-431 (438)
209 COG2223 NarK Nitrate/nitrite t 98.8 2.2E-07 4.9E-12 103.0 17.4 149 548-705 43-194 (417)
210 KOG1330 Sugar transporter/spin 98.7 1.1E-08 2.3E-13 114.5 5.8 159 547-715 61-220 (493)
211 PF01306 LacY_symp: LacY proto 98.7 4.5E-07 9.7E-12 101.6 18.8 172 14-190 233-405 (412)
212 TIGR01301 GPH_sucrose GPH fami 98.7 6.3E-07 1.4E-11 102.5 19.6 189 509-709 4-223 (477)
213 PRK10133 L-fucose transporter; 98.7 1.3E-06 2.8E-11 98.4 21.6 136 526-677 42-177 (438)
214 KOG0255 Synaptic vesicle trans 98.7 1.5E-07 3.2E-12 107.6 13.9 141 555-708 118-258 (521)
215 PRK11902 ampG muropeptide tran 98.7 2.3E-06 5E-11 94.4 22.3 144 29-180 233-385 (402)
216 PRK09848 glucuronide transport 98.7 1.7E-06 3.7E-11 96.9 21.3 127 26-154 248-384 (448)
217 TIGR01272 gluP glucose/galacto 98.6 2.8E-06 6.1E-11 91.6 20.9 137 29-172 164-302 (310)
218 TIGR00896 CynX cyanate transpo 98.6 1.5E-06 3.3E-11 93.7 18.9 131 24-159 215-347 (355)
219 PTZ00207 hypothetical protein; 98.6 2.5E-06 5.5E-11 99.9 20.8 164 526-706 43-207 (591)
220 TIGR00805 oat sodium-independe 98.6 6.5E-07 1.4E-11 105.8 15.9 161 546-708 60-284 (633)
221 PRK10429 melibiose:sodium symp 98.6 4.3E-06 9.3E-11 94.9 20.9 130 23-154 248-389 (473)
222 KOG0254 Predicted transporter 98.6 2.5E-06 5.4E-11 97.9 18.9 140 558-708 92-233 (513)
223 PRK09669 putative symporter Ya 98.5 5E-06 1.1E-10 93.2 20.4 127 26-154 249-384 (444)
224 KOG2615 Permease of the major 98.5 4.1E-07 9E-12 99.8 11.3 145 555-709 68-218 (451)
225 KOG2504 Monocarboxylate transp 98.5 1.1E-06 2.4E-11 101.4 15.2 168 9-180 301-471 (509)
226 TIGR00806 rfc RFC reduced fola 98.5 6.7E-06 1.5E-10 93.6 20.1 159 528-706 44-204 (511)
227 PF03825 Nuc_H_symport: Nucleo 98.5 1.2E-05 2.6E-10 90.2 21.9 172 13-188 214-398 (400)
228 KOG3762 Predicted transporter 98.5 6.1E-07 1.3E-11 102.1 11.4 158 526-702 387-545 (618)
229 PF13347 MFS_2: MFS/sugar tran 98.5 4.4E-06 9.5E-11 93.2 18.0 141 11-154 230-380 (428)
230 KOG2532 Permease of the major 98.5 3E-06 6.4E-11 96.8 16.5 152 546-705 65-217 (466)
231 KOG3098 Uncharacterized conser 98.5 0.00013 2.9E-09 83.0 29.5 105 49-154 56-160 (461)
232 KOG3764 Vesicular amine transp 98.4 8.6E-07 1.9E-11 97.9 9.5 147 556-711 107-254 (464)
233 TIGR00769 AAA ADP/ATP carrier 98.2 0.024 5.2E-07 65.3 42.4 145 7-155 8-188 (472)
234 PF06963 FPN1: Ferroportin1 (F 98.2 0.0092 2E-07 67.9 36.5 159 497-670 250-409 (432)
235 PF02487 CLN3: CLN3 protein; 98.2 0.0027 5.8E-08 71.4 31.3 134 48-187 64-197 (402)
236 KOG0253 Synaptic vesicle trans 98.1 1.2E-05 2.5E-10 88.3 10.9 180 2-188 325-522 (528)
237 PF06813 Nodulin-like: Nodulin 98.1 6E-05 1.3E-09 79.5 16.0 164 525-704 17-181 (250)
238 PRK11462 putative transporter; 98.1 0.0004 8.7E-09 79.0 23.7 126 26-153 248-382 (460)
239 PF06779 DUF1228: Protein of u 98.1 2.4E-05 5.1E-10 69.4 9.5 81 18-100 4-84 (85)
240 COG2807 CynX Cyanate permease 98.1 0.00034 7.3E-09 77.1 20.0 172 4-184 210-384 (395)
241 TIGR00788 fbt folate/biopterin 98.0 4E-05 8.7E-10 87.3 13.4 116 34-151 281-406 (468)
242 KOG4686 Predicted sugar transp 98.0 0.00011 2.3E-09 78.6 15.2 144 31-177 290-435 (459)
243 KOG2816 Predicted transporter 98.0 8.5E-05 1.8E-09 84.9 15.8 137 565-713 72-208 (463)
244 KOG0252 Inorganic phosphate tr 98.0 4.2E-05 9.2E-10 86.1 12.5 153 553-711 82-252 (538)
245 COG2211 MelB Na+/melibiose sym 98.0 0.0003 6.6E-09 80.2 19.6 140 14-155 244-393 (467)
246 KOG0637 Sucrose transporter an 98.0 7.5E-05 1.6E-09 84.0 14.3 143 8-152 34-199 (498)
247 KOG3762 Predicted transporter 98.0 8.2E-05 1.8E-09 85.1 14.7 160 19-182 384-544 (618)
248 COG3104 PTR2 Dipeptide/tripept 98.0 8.2E-05 1.8E-09 84.7 13.9 146 549-702 56-204 (498)
249 PF00083 Sugar_tr: Sugar (and 97.9 1.9E-07 4.2E-12 103.8 -8.0 144 557-707 48-194 (451)
250 KOG2533 Permease of the major 97.9 0.00013 2.8E-09 84.1 14.7 151 549-709 76-232 (495)
251 KOG1237 H+/oligopeptide sympor 97.9 0.0048 1E-07 72.5 27.6 164 25-195 57-252 (571)
252 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.0004 8.7E-09 82.7 18.3 155 25-181 7-178 (654)
253 PF05978 UNC-93: Ion channel r 97.9 0.00073 1.6E-08 66.5 16.8 107 48-155 42-148 (156)
254 KOG4332 Predicted sugar transp 97.9 0.00051 1.1E-08 72.9 16.4 92 31-125 62-154 (454)
255 COG0738 FucP Fucose permease [ 97.7 0.0019 4.2E-08 72.1 18.7 159 13-178 243-402 (422)
256 TIGR00926 2A1704 Peptide:H+ sy 97.5 0.0027 5.8E-08 75.8 18.1 151 549-702 18-180 (654)
257 KOG2325 Predicted transporter/ 97.5 0.0015 3.2E-08 75.0 14.7 149 555-709 71-234 (488)
258 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00083 1.8E-08 58.4 9.7 69 13-83 7-75 (77)
259 PF03209 PUCC: PUCC protein; 97.5 0.011 2.4E-07 66.3 20.6 147 30-178 233-391 (403)
260 KOG2563 Permease of the major 97.4 0.003 6.6E-08 71.4 15.1 122 554-680 78-203 (480)
261 KOG3574 Acetyl-CoA transporter 97.4 0.023 5.1E-07 63.3 21.2 138 9-151 34-188 (510)
262 PF05631 DUF791: Protein of un 97.3 0.014 3E-07 64.6 18.8 152 549-710 64-222 (354)
263 TIGR00939 2a57 Equilibrative N 97.3 0.54 1.2E-05 53.8 32.0 115 555-672 307-427 (437)
264 KOG3810 Micronutrient transpor 97.1 0.013 2.9E-07 64.4 15.5 135 53-189 52-186 (433)
265 PF03092 BT1: BT1 family; Int 96.6 0.023 5E-07 64.4 12.9 154 548-710 19-181 (433)
266 COG0477 ProP Permeases of the 96.6 0.15 3.2E-06 50.7 17.2 129 557-693 41-174 (338)
267 TIGR00769 AAA ADP/ATP carrier 96.3 0.32 7E-06 56.2 20.5 124 555-678 44-190 (472)
268 PF12832 MFS_1_like: MFS_1 lik 96.3 0.023 5E-07 49.3 8.2 66 519-594 9-74 (77)
269 PRK03612 spermidine synthase; 96.0 0.95 2.1E-05 53.0 22.4 159 16-179 24-191 (521)
270 PF00854 PTR2: POT family; In 95.9 0.04 8.7E-07 60.7 10.1 104 74-179 2-117 (372)
271 KOG3098 Uncharacterized conser 95.8 0.51 1.1E-05 54.3 18.6 106 42-148 278-404 (461)
272 PF07672 MFS_Mycoplasma: Mycop 95.8 0.46 9.9E-06 50.8 16.7 57 128-184 2-61 (267)
273 KOG1479 Nucleoside transporter 95.7 2.4 5.3E-05 48.0 23.2 120 555-677 282-402 (406)
274 PRK03612 spermidine synthase; 95.6 0.89 1.9E-05 53.2 19.9 49 651-699 143-192 (521)
275 PF06963 FPN1: Ferroportin1 (F 95.6 0.44 9.6E-06 54.4 16.9 141 10-152 262-412 (432)
276 PF13000 Acatn: Acetyl-coenzym 95.5 1.9 4.2E-05 50.0 21.7 142 10-153 4-175 (544)
277 PF05978 UNC-93: Ion channel r 95.4 0.45 9.7E-06 47.0 14.3 105 562-676 44-148 (156)
278 COG3202 ATP/ADP translocase [E 95.1 8.6 0.00019 44.7 31.0 143 9-155 30-207 (509)
279 PF01770 Folate_carrier: Reduc 94.7 1.6 3.4E-05 49.7 17.8 146 549-707 35-184 (412)
280 PF02487 CLN3: CLN3 protein; 94.5 0.41 8.8E-06 54.2 12.6 139 8-153 249-392 (402)
281 PF03219 TLC: TLC ATP/ADP tran 94.3 4 8.7E-05 47.5 20.5 142 535-678 41-205 (491)
282 PF03219 TLC: TLC ATP/ADP tran 94.3 14 0.0003 43.2 35.9 147 6-156 24-204 (491)
283 KOG0637 Sucrose transporter an 94.2 0.1 2.2E-06 59.6 6.9 163 500-674 23-200 (498)
284 PF00854 PTR2: POT family; In 94.0 0.29 6.3E-06 53.9 10.1 116 586-703 2-122 (372)
285 PF03137 OATP: Organic Anion T 92.3 0.039 8.4E-07 64.6 -0.1 131 546-677 30-201 (539)
286 KOG3626 Organic anion transpor 89.3 3.5 7.5E-05 50.1 12.4 163 547-711 125-349 (735)
287 COG3202 ATP/ADP translocase [E 84.7 89 0.0019 36.7 20.6 112 567-678 74-209 (509)
288 PF06779 DUF1228: Protein of u 83.6 7.2 0.00016 34.8 8.3 67 529-605 11-77 (85)
289 KOG1237 H+/oligopeptide sympor 82.8 37 0.00081 40.4 16.4 150 552-702 71-243 (571)
290 TIGR00939 2a57 Equilibrative N 80.1 14 0.00031 42.3 11.4 59 94-152 370-428 (437)
291 KOG1479 Nucleoside transporter 79.5 64 0.0014 36.9 15.9 28 512-539 20-47 (406)
292 KOG3574 Acetyl-CoA transporter 74.1 38 0.00083 38.7 12.0 84 508-608 30-120 (510)
293 PF01733 Nucleoside_tran: Nucl 73.0 1.1 2.5E-05 48.4 0.0 111 560-672 187-303 (309)
294 KOG3880 Predicted small molecu 72.6 35 0.00076 38.0 11.0 136 46-186 65-200 (409)
295 PF02990 EMP70: Endomembrane p 70.5 43 0.00093 39.4 12.2 23 563-585 305-327 (521)
296 KOG3097 Predicted membrane pro 70.3 27 0.00058 39.0 9.6 73 53-126 68-140 (390)
297 COG4262 Predicted spermidine s 64.9 2.5E+02 0.0055 32.0 16.5 96 27-123 28-132 (508)
298 KOG4332 Predicted sugar transp 63.3 84 0.0018 34.5 11.4 133 44-178 283-424 (454)
299 PF13000 Acatn: Acetyl-coenzym 58.9 56 0.0012 38.4 9.9 31 562-592 47-77 (544)
300 PRK10263 DNA translocase FtsK; 58.2 1E+02 0.0022 40.2 12.7 20 564-583 61-80 (1355)
301 PF11947 DUF3464: Protein of u 58.1 28 0.0006 34.6 6.3 88 577-668 56-145 (153)
302 PHA03239 envelope glycoprotein 49.7 1.6E+02 0.0034 34.0 11.4 26 344-369 398-423 (429)
303 PF01733 Nucleoside_tran: Nucl 49.1 6.8 0.00015 42.4 0.6 104 47-151 186-303 (309)
304 PF06027 DUF914: Eukaryotic pr 46.7 1.8E+02 0.004 32.4 11.2 14 507-520 131-144 (334)
305 PF05297 Herpes_LMP1: Herpesvi 46.1 6.7 0.00015 42.3 0.0 12 698-709 179-190 (381)
306 COG5336 Uncharacterized protei 43.8 41 0.00089 31.5 4.7 35 647-681 36-70 (116)
307 KOG3880 Predicted small molecu 41.6 82 0.0018 35.2 7.3 140 7-152 252-398 (409)
308 PF07760 DUF1616: Protein of u 39.8 3E+02 0.0066 29.7 11.5 56 99-157 22-77 (287)
309 COG2274 SunT ABC-type bacterio 38.7 6.6E+02 0.014 31.0 15.2 25 558-582 160-184 (709)
310 COG5336 Uncharacterized protei 38.7 98 0.0021 29.1 6.3 40 47-86 46-86 (116)
311 PF06912 DUF1275: Protein of u 37.5 4.5E+02 0.0098 26.6 20.8 63 47-109 50-123 (209)
312 PF10225 DUF2215: Uncharacteri 34.1 3.6E+02 0.0078 28.8 10.7 83 92-178 30-112 (249)
313 KOG3810 Micronutrient transpor 33.7 1.2E+02 0.0026 34.5 7.1 96 44-139 272-369 (433)
314 PF01528 Herpes_glycop: Herpes 33.6 4.6E+02 0.01 29.8 11.9 36 91-126 229-264 (374)
315 COG1230 CzcD Co/Zn/Cd efflux s 33.6 4.8E+02 0.01 28.8 11.6 25 582-606 84-108 (296)
316 KOG1307 K+-dependent Ca2+/Na+ 33.5 2.7E+02 0.0058 32.6 9.9 21 24-46 78-98 (588)
317 PF03547 Mem_trans: Membrane t 31.1 7.5E+02 0.016 27.2 22.8 15 57-71 9-23 (385)
318 PF03547 Mem_trans: Membrane t 30.5 2.4E+02 0.0053 31.1 9.2 12 571-582 11-22 (385)
319 PF12670 DUF3792: Protein of u 28.4 4.9E+02 0.011 24.2 13.9 29 566-594 45-74 (116)
320 COG4769 Predicted membrane pro 26.7 1.4E+02 0.0031 30.1 5.6 52 53-110 83-134 (181)
321 PHA03242 envelope glycoprotein 25.0 7.5E+02 0.016 28.7 11.7 35 91-125 243-277 (428)
322 PF02632 BioY: BioY family; I 24.5 3.5E+02 0.0076 26.5 8.0 26 49-74 59-84 (148)
323 PF12805 FUSC-like: FUSC-like 23.7 4.8E+02 0.01 27.9 9.6 37 77-113 3-40 (284)
324 PF06123 CreD: Inner membrane 23.0 1.2E+03 0.027 27.0 13.6 26 109-134 358-383 (430)
325 TIGR00801 ncs2 uracil-xanthine 22.8 1.2E+03 0.025 26.6 17.4 120 8-134 7-132 (415)
326 COG4956 Integral membrane prot 22.2 1.1E+03 0.024 26.4 11.7 21 587-607 80-100 (356)
327 PF11947 DUF3464: Protein of u 22.1 3.1E+02 0.0066 27.4 7.0 52 94-148 95-146 (153)
328 PF05297 Herpes_LMP1: Herpesvi 22.1 30 0.00064 37.5 0.0 18 685-702 170-187 (381)
329 COG1230 CzcD Co/Zn/Cd efflux s 22.0 1.1E+03 0.024 26.0 16.6 77 2-86 21-100 (296)
330 KOG4255 Uncharacterized conser 21.4 1.2E+03 0.027 26.5 14.3 97 27-126 32-142 (439)
331 PF06123 CreD: Inner membrane 21.1 1.3E+03 0.029 26.7 13.2 21 72-92 377-397 (430)
332 PF07672 MFS_Mycoplasma: Mycop 20.8 1E+03 0.022 26.0 11.0 102 46-148 144-255 (267)
333 PRK11715 inner membrane protei 20.8 1.4E+03 0.029 26.7 13.2 92 15-114 334-427 (436)
334 KOG4812 Golgi-associated prote 20.1 1E+03 0.023 25.5 10.6 33 508-540 160-192 (262)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.9e-43 Score=391.35 Aligned_cols=446 Identities=30% Similarity=0.510 Sum_probs=376.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHhCCCCchh----HHHHHHHHHHHHHHHHHHhHHHhhhhhC
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIK--------REFHLETEPT----IEGLIVAMSLIGATCITTCSGAIADWLG 71 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~--------~dlgl~~s~s----~igll~Sif~IG~~Ig~~~~g~LsDrfG 71 (732)
..+..+.++++.+-.|+....+++..+.+. +.+|...++. .++.+++++.+|.++|+++.+.++||+|
T Consensus 9 L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~G 88 (485)
T KOG0569|consen 9 LLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFG 88 (485)
T ss_pred HHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 445666777777889999988888765433 3345322332 5788999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 72 RRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 72 rR~vLligllL~aIgsll~a~---a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
||..+++..++..++.+++.+ .+++..++++|++.|+..|......+.++.|..|++.||.+..+.+++.++|..++
T Consensus 89 RK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~ 168 (485)
T KOG0569|consen 89 RKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLG 168 (485)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHH
Confidence 999999998888877777665 57889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhh-ccccHHHHHHHHHhhcCcChhhHHHHHHhhhcc
Q 004754 149 YCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVS-KGRMLEAKKVLQSLRGREDVAGEMALLVEGLGV 227 (732)
Q Consensus 149 ~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (732)
+....-..+.+...|.+.+.+..+++++.++ .+.++|||||||.. +++.++|++.++.+++.+|++.+..
T Consensus 169 ~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e-------- 239 (485)
T KOG0569|consen 169 QVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIE-------- 239 (485)
T ss_pred HHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHH--------
Confidence 8777777777888999999999999988665 57899999999988 8999999999999998875432221
Q ss_pred ccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCC
Q 004754 228 GGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQG 307 (732)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (732)
T Consensus 240 -------------------------------------------------------------------------------- 239 (485)
T KOG0569|consen 240 -------------------------------------------------------------------------------- 239 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCccccc
Q 004754 308 SMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRH 387 (732)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (732)
+-++|..+.
T Consensus 240 ------------------------~~~~e~~~~----------------------------------------------- 248 (485)
T KOG0569|consen 240 ------------------------EMLREIEEE----------------------------------------------- 248 (485)
T ss_pred ------------------------HHHHHHHHh-----------------------------------------------
Confidence 000000000
Q ss_pred CccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHH
Q 004754 388 GSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVS 467 (732)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~ 467 (732)
T Consensus 249 -------------------------------------------------------------------------------- 248 (485)
T KOG0569|consen 249 -------------------------------------------------------------------------------- 248 (485)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcc-cchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchh
Q 004754 468 QAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAE-PGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLL 546 (732)
Q Consensus 468 ~~~~~~~~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 546 (732)
+.++.+..++.++++ +..++...+++.+...+|++|++++.+|...+++++|+++
T Consensus 249 ----------------------~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~-- 304 (485)
T KOG0569|consen 249 ----------------------ELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP-- 304 (485)
T ss_pred ----------------------ccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH--
Confidence 000112456777774 5678889999999999999999999999999999998774
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhccc-chhhHHHHHHHHH
Q 004754 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGS-VVHASISTVSVVL 625 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 625 (732)
..+...+...++..++.++++.+++||+|||++++.++.++.+..+++.......... .+..+..+.++++
T Consensus 305 --------~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 305 --------EEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFL 376 (485)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 6777778888999999999999999999999999999999999988887765544333 2344556788899
Q ss_pred HHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhcc
Q 004754 626 YFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~ 705 (732)
|.+.|.+|.+|+++.+.+|++|+..|+.+.+++.++.|+.+++..+.++.+.+..|. ..|++|++.++++.++.++++|
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999999999999996 7999999999999999999999
Q ss_pred CCCCCChhhhhhhhhcc
Q 004754 706 ETKGMPLEVITEFFAVG 722 (732)
Q Consensus 706 et~~~~~~~~~~~~~~~ 722 (732)
|||||+.+|+.+.++++
T Consensus 456 ETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 456 ETKGRTPYEIIEELEKR 472 (485)
T ss_pred ccCCCCHHHHHHHHHhC
Confidence 99999999998888766
No 2
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.6e-38 Score=359.51 Aligned_cols=443 Identities=21% Similarity=0.235 Sum_probs=311.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C--CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREF-H--LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dl-g--l~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLlig 79 (732)
..+.++++++++.+++++|.+.++.++|.+..++ + ...+..+.+++.+.+.+++.++++++|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 4566788899999999999999999999887753 1 111566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004754 80 SVLYFIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 80 llL~aIgsll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l 153 (732)
+++.+++.++++++++ ++.++++|++.|++.|..++..+.++.|++|+++||+++++.+.+..+|.++++....
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888765 7899999999999999999999999999999999999999999999999999865554
Q ss_pred HHHh---------------------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHH-HHHHHHHhhcC
Q 004754 154 GMSL---------------------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE-AKKVLQSLRGR 211 (732)
Q Consensus 154 ~~~l---------------------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~-~~~~~~~~~~~ 211 (732)
.... ....+||++|.+.++++++.++ ..+++||||+|+..++|.++ +++.+.+....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 3221 0124799999988888876554 46789999999998888743 55444443321
Q ss_pred cChhhHHHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCc
Q 004754 212 EDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDP 291 (732)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 291 (732)
+..+ +.++++
T Consensus 252 ~~~~-------------------------------------~~~~~~--------------------------------- 261 (502)
T TIGR00887 252 KIEA-------------------------------------EPDEVE--------------------------------- 261 (502)
T ss_pred cccc-------------------------------------Cccccc---------------------------------
Confidence 1000 000000
Q ss_pred chhccccccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCccccccccccc
Q 004754 292 LVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIE 371 (732)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (732)
+++
T Consensus 262 -----------------------------------------------------------------------------~~~ 264 (502)
T TIGR00887 262 -----------------------------------------------------------------------------KAS 264 (502)
T ss_pred -----------------------------------------------------------------------------chh
Confidence 000
Q ss_pred ccCCCCCCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeecccc
Q 004754 372 KDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGE 451 (732)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~ 451 (732)
++
T Consensus 265 ~~------------------------------------------------------------------------------ 266 (502)
T TIGR00887 265 TA------------------------------------------------------------------------------ 266 (502)
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccchhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccch---hhHHHHHHHHHHHHHhhhhHH
Q 004754 452 DVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGV---KRALMVGVGIQILQQLSGING 528 (732)
Q Consensus 452 ~~~~g~~~~~~~~l~~~~~~~~~~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~g~~~ 528 (732)
+ +..+.++++++++.. .++.++++.+..+.+....++
T Consensus 267 --------------------------------------~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 306 (502)
T TIGR00887 267 --------------------------------------V--EVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYG 306 (502)
T ss_pred --------------------------------------c--cchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 000123556654211 112222222222222233456
Q ss_pred HHHhHHHHHHHhcccchhcccC-CC-hhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004754 529 VLYYTPQILEQAGVGVLLSNLG-IS-SASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~-~~-~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
+..|.|.++++.|++....... .. .-........+..++.+++.+++++++||+|||++++.+..++.++++++.+..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 6778899998877653100000 00 000111123344566778889999999999999998888877777666555432
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh-------
Q 004754 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS------- 679 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~------- 679 (732)
... ..+ ..+...+++.++++.+..++.+++++|++|++.|+++.|+++.+.+++++++|++.|++.+.
T Consensus 387 ~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 461 (502)
T TIGR00887 387 NHL---STH--GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGY 461 (502)
T ss_pred Hhc---chh--HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccc
Confidence 110 001 11222223333445667778888899999999999999999999999999999999999884
Q ss_pred ---hchhHHHHHHHHHHHHHHHHHHHhccCCCCCChhhhhh
Q 004754 680 ---VGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITE 717 (732)
Q Consensus 680 ---~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~~~~~~~~ 717 (732)
.++...|++++++++++.++. +++||||++++||+++
T Consensus 462 ~~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 462 PTGIWMGHVLEIFALFMFLGILFT-LLIPETKGKSLEELSG 501 (502)
T ss_pred cccccchHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhhC
Confidence 345568888888888876654 6789999999998865
No 3
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1e-38 Score=363.00 Aligned_cols=447 Identities=38% Similarity=0.687 Sum_probs=367.4
Q ss_pred hHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCCC---ch--hHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHH
Q 004754 4 AALVAIAAAIGNLLQGWD--NATIAGAVLYIKREFHLET---EP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPML 76 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~--~~~~~~~~~~I~~dlgl~~---s~--s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vL 76 (732)
.....+.+.++.+..+++ .+...++.+.+.++..... +. ++.+|+.++..++..++++++|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 456677788888888887 5666777777776542211 22 3559999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 77 IVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 77 ligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
+++.+++.++.+++++++|+++++++|++.|+|.|....+.+.+++|..|++.||...++.+...++|..++.+......
T Consensus 123 ~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~ 202 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTS 202 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999944433332
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCc--ChhhHHHHHHhhhccccccchh
Q 004754 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE--DVAGEMALLVEGLGVGGETSLE 234 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 234 (732)
.. ..+||.++++..+++++..+. .+++||||+|+.++++.+++++.+.++++.+ +...+...+.
T Consensus 203 ~~-~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~------------ 268 (513)
T KOG0254|consen 203 KV-YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLK------------ 268 (513)
T ss_pred cC-CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHH------------
Confidence 21 158999999999999998877 8999999999999999999999999988732 2111111000
Q ss_pred hhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccc
Q 004754 235 EYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLF 314 (732)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (732)
++.
T Consensus 269 ----------------------~~~------------------------------------------------------- 271 (513)
T KOG0254|consen 269 ----------------------IKL------------------------------------------------------- 271 (513)
T ss_pred ----------------------HHH-------------------------------------------------------
Confidence 000
Q ss_pred cccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCC
Q 004754 315 PHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGN 394 (732)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (732)
.+|
T Consensus 272 -------------------~~~---------------------------------------------------------- 274 (513)
T KOG0254|consen 272 -------------------LVE---------------------------------------------------------- 274 (513)
T ss_pred -------------------HHh----------------------------------------------------------
Confidence 000
Q ss_pred CCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhh
Q 004754 395 AGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSK 474 (732)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~ 474 (732)
T Consensus 275 -------------------------------------------------------------------------------- 274 (513)
T KOG0254|consen 275 -------------------------------------------------------------------------------- 274 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChh
Q 004754 475 ELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSA 554 (732)
Q Consensus 475 ~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~ 554 (732)
.....++..+++++++..++++++++.++.++|++|++.+.+|.+++++..|... .
T Consensus 275 ---------------~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~---------~ 330 (513)
T KOG0254|consen 275 ---------------AEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKS---------D 330 (513)
T ss_pred ---------------hhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCC---------c
Confidence 0000112246677777789999999999999999999999999999999987652 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc----cchhhHHHHHHHHHHHHHH
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG----SVVHASISTVSVVLYFCCF 630 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 630 (732)
. ...+.+.++..+++.+++.+++||+|||++++.+...+.++++++......... .....+..+...+++...|
T Consensus 331 ~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f 408 (513)
T KOG0254|consen 331 T--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSF 408 (513)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHH
Confidence 1 445566778888888899999999999999999999999999998876665432 2234567788889999999
Q ss_pred hhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHH-HHHHhccCCCC
Q 004754 631 VMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWI-FVFIKVPETKG 709 (732)
Q Consensus 631 ~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i-~~~~~~~et~~ 709 (732)
..++++++|.+.+|++|.+.|+.+.+++..+.|+.+++....+..+.+..+....|.++++++.+.++ ++++++||||+
T Consensus 409 ~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 409 AIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred hcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 99999999999999999999999999999999999999999999888876656788888888888888 89999999999
Q ss_pred CChhhhhhhhhccCC
Q 004754 710 MPLEVITEFFAVGAS 724 (732)
Q Consensus 710 ~~~~~~~~~~~~~~~ 724 (732)
+++|++++.+.++..
T Consensus 489 ~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 489 LTLEEINELFEEGIK 503 (513)
T ss_pred CcHHHHHHHHHcCCc
Confidence 999999998877643
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.3e-37 Score=344.41 Aligned_cols=436 Identities=28% Similarity=0.517 Sum_probs=327.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREF--------HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dl--------gl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~v 75 (732)
...+++++.++.+.+++|...+++.+|.+.+++ +. +..+.+++.+++.++.+++++++|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 355777788899999999999999999999988 66 78899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH
Q 004754 76 LIVSSVLYFIGGLVMLWS------------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 76 LligllL~aIgsll~a~a------------~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~ 143 (732)
++++.++.+++.++++++ +.+..++++|++.|++.|..++...+++.|++|+++||+++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999988887763 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH------hhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhH
Q 004754 144 GMFLAYCMVFGMS------LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGE 217 (732)
Q Consensus 144 G~aIg~l~~l~~~------l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (732)
|.+++++...... .....+||+.|++.+++.++..+ ..+++||+|+|+..+++.+++++..++....++....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999854433222 11346999999998888777554 4678999999987777766665554444322110000
Q ss_pred HHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccc
Q 004754 218 MALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFG 297 (732)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (732)
. ++++
T Consensus 247 ~------------------------------------~~~~--------------------------------------- 251 (479)
T PRK10077 247 L------------------------------------QEIK--------------------------------------- 251 (479)
T ss_pred H------------------------------------HHHH---------------------------------------
Confidence 0 0000
Q ss_pred cccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCC
Q 004754 298 SVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPP 377 (732)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (732)
+
T Consensus 252 --------------------------------------~----------------------------------------- 252 (479)
T PRK10077 252 --------------------------------------H----------------------------------------- 252 (479)
T ss_pred --------------------------------------H-----------------------------------------
Confidence 0
Q ss_pred CCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhh
Q 004754 378 AHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGG 457 (732)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~ 457 (732)
+..+ +
T Consensus 253 -----------------------------------~~~~------------------~---------------------- 257 (479)
T PRK10077 253 -----------------------------------SLDH------------------G---------------------- 257 (479)
T ss_pred -----------------------------------HHHH------------------h----------------------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHH
Q 004754 458 EVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQIL 537 (732)
Q Consensus 458 ~~~~~~~l~~~~~~~~~~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 537 (732)
....+.++. ......+.++....+.+..+++.+.+|.|.++
T Consensus 258 --------------------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 298 (479)
T PRK10077 258 --------------------------------------RKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF 298 (479)
T ss_pred --------------------------------------hhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 000000000 01122333444455666667788889999999
Q ss_pred HHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhH
Q 004754 538 EQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHAS 617 (732)
Q Consensus 538 ~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 617 (732)
++.|.+. ..+.+...+.++..+++.+++++++||+|||++++.+..++.++++++...... ..+..
T Consensus 299 ~~~g~~~----------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~----~~~~~ 364 (479)
T PRK10077 299 KTLGAST----------DIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT----QAPGI 364 (479)
T ss_pred HHcCCCC----------chHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc----CcccH
Confidence 8766542 333445556778888999999999999999999999988888877776543211 11222
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH------HhhchhHHHHHHHH
Q 004754 618 ISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL------NSVGLAGVFGMYAV 691 (732)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~------~~~g~~~~f~~~~~ 691 (732)
..+..++++..+++.++.+..+.+++|++|++.|+++.|+++.+.++|.++++.+++.+. +..++...|+++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 444 (479)
T PRK10077 365 VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence 344455666666666667788899999999999999999999999999999988887655 46788889999999
Q ss_pred HHHHHHHHHHHhccCCCCCChhhhhhhhhccCC
Q 004754 692 VCVISWIFVFIKVPETKGMPLEVITEFFAVGAS 724 (732)
Q Consensus 692 ~~~i~~i~~~~~~~et~~~~~~~~~~~~~~~~~ 724 (732)
+++++.++.+++.||||++++|++++.++++.+
T Consensus 445 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 477 (479)
T PRK10077 445 MGVLAALFMWKFVPETKGKTLEEMEALWEPETK 477 (479)
T ss_pred HHHHHHHHHHhccccCCCCCHHHHHHHHhhccc
Confidence 888888888888999999999999888866543
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.1e-37 Score=365.48 Aligned_cols=207 Identities=21% Similarity=0.303 Sum_probs=185.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
..|.++++++++.++.+++...++.++|.+.+++++ +..+.+++.+++.++++++++++|+++||+|||+++++++++
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 467788889999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh-----
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----- 157 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l----- 157 (732)
.++++++++++++++.++++|++.|++.|+..++..+++.|++|+++||+++++.+.++.+|.++++.+......
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999999999999999999999999999999999999999999999998655433321
Q ss_pred ------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCc
Q 004754 158 ------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE 212 (732)
Q Consensus 158 ------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~ 212 (732)
....+||+++++.++++++.+ +.++++||||+|+..+++.+++.+.++++...+
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 112479999999888777654 557889999999999999999999998887654
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=5.7e-35 Score=318.30 Aligned_cols=442 Identities=36% Similarity=0.626 Sum_probs=322.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------CchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE------TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPML 76 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~------~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vL 76 (732)
+.+...+++.++.++.+++...++++++.+..+++.+ .+..+.+++.+++.++..++++++|+++||+|||+++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~ 104 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL 104 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH
Confidence 3455666777788899999999999999999998873 2378999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH-
Q 004754 77 IVSSVLYFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV- 152 (732)
Q Consensus 77 ligllL~aIgsll~a~a~---s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~- 152 (732)
+++.++.+++.+++.+.. +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~ 184 (481)
T TIGR00879 105 LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGS 184 (481)
T ss_pred HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999886543 4568999999999999999999999999999999999999999999999999996554
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccc
Q 004754 153 FGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETS 232 (732)
Q Consensus 153 l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (732)
.........+||+.|++.++..++. ++..+++||+|+++..+++.+++.+..++....++.....
T Consensus 185 ~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 249 (481)
T TIGR00879 185 GKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKEL-------------- 249 (481)
T ss_pred HhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHH--------------
Confidence 1133345679999999976665554 4456778999987765555444333322221111000000
Q ss_pred hhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccc
Q 004754 233 LEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRST 312 (732)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (732)
.++.+.
T Consensus 250 ------------------~~~~~~-------------------------------------------------------- 255 (481)
T TIGR00879 250 ------------------LDELEL-------------------------------------------------------- 255 (481)
T ss_pred ------------------HHHHHH--------------------------------------------------------
Confidence 000000
Q ss_pred cccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCcccc
Q 004754 313 LFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQ 392 (732)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (732)
.++.
T Consensus 256 --------------------~~~~-------------------------------------------------------- 259 (481)
T TIGR00879 256 --------------------IDIK-------------------------------------------------------- 259 (481)
T ss_pred --------------------HHHH--------------------------------------------------------
Confidence 0000
Q ss_pred CCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhh
Q 004754 393 GNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALC 472 (732)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~ 472 (732)
.
T Consensus 260 -------------------------------------------------------------------------------~ 260 (481)
T TIGR00879 260 -------------------------------------------------------------------------------R 260 (481)
T ss_pred -------------------------------------------------------------------------------H
Confidence 0
Q ss_pred hhhhhccCCCCcccCCCCcccccCCChhhhccc--chhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccC
Q 004754 473 SKELLDQNPIGPAMIHPSETAAKGFSWKDLAEP--GVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLG 550 (732)
Q Consensus 473 ~~~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~ 550 (732)
.. +...++..++++++. ..+++.++...+..+.+..+.+.+.+|.|.++++.|++
T Consensus 261 ~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~------- 317 (481)
T TIGR00879 261 SI----------------EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVS------- 317 (481)
T ss_pred HH----------------HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCC-------
Confidence 00 000000012233321 12455566666666666666677788999988876544
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccc--hhhHHHHHHHHHHHH
Q 004754 551 ISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSV--VHASISTVSVVLYFC 628 (732)
Q Consensus 551 ~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 628 (732)
. ..+.....+..+..+++.++++++.||+|||+++..+..++.++++++.+......... ...+..+...+++..
T Consensus 318 --~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (481)
T TIGR00879 318 --T-DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIA 394 (481)
T ss_pred --c-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHH
Confidence 3 44555666778888999999999999999999988887777666666553222111100 013344455566667
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
+++.+..+....++.|.+|++.|+++.|+.+.+.++|+++++.+.+.+.+..|+...|++++++++++.++.+++.||+|
T Consensus 395 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 395 FFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 77777778888888999999999999999999999999999999999999999999999999999999888888889999
Q ss_pred CCChhh
Q 004754 709 GMPLEV 714 (732)
Q Consensus 709 ~~~~~~ 714 (732)
+++.++
T Consensus 475 ~~~~~~ 480 (481)
T TIGR00879 475 GRTLEE 480 (481)
T ss_pred CCChhh
Confidence 877653
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=1.2e-42 Score=384.31 Aligned_cols=434 Identities=38% Similarity=0.628 Sum_probs=340.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHhCCCCc-------hhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIK--REFHLETE-------PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~--~dlgl~~s-------~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLlig 79 (732)
+++.++.+.+++|...++...+... ..+..+.+ ..+.+++.++..+|..+|++++|.++||+|||+++.++
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~ 82 (451)
T PF00083_consen 3 LIASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIIS 82 (451)
T ss_pred EeeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccc
Confidence 3456777999999999887766544 23333211 23578999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 80 SVLYFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 80 llL~aIgsll~a~a~---s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
.++..++.++.++++ +++.++++|++.|++.|...+..+.++.|..|+++||+..++.+.+..+|.+++.+......
T Consensus 83 ~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 83 ALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999 99999999999999999999999999999999999999999999999999999855543332
Q ss_pred hhc-cchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhh
Q 004754 157 LMT-APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEE 235 (732)
Q Consensus 157 l~~-~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (732)
... ..+||..+.+.++++++.++ ..+++||||+|+..++|.+++++.++++++.+..+
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~-------------------- 221 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIED-------------------- 221 (451)
T ss_pred cccccccccccccccccccccccc-cccccccccceeccccccccccccccccccccccc--------------------
Confidence 212 24699999999999887554 46889999999999999999888877754432100
Q ss_pred hhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccc
Q 004754 236 YIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFP 315 (732)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (732)
T Consensus 222 -------------------------------------------------------------------------------- 221 (451)
T PF00083_consen 222 -------------------------------------------------------------------------------- 221 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCC
Q 004754 316 HFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNA 395 (732)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (732)
+|++|+ -
T Consensus 222 ---------------~~~~~~-----~----------------------------------------------------- 228 (451)
T PF00083_consen 222 ---------------EEIEEI-----K----------------------------------------------------- 228 (451)
T ss_pred ---------------cccccc-----c-----------------------------------------------------
Confidence 000000 0
Q ss_pred CCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhh
Q 004754 396 GEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKE 475 (732)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~ 475 (732)
T Consensus 229 -------------------------------------------------------------------------------- 228 (451)
T PF00083_consen 229 -------------------------------------------------------------------------------- 228 (451)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhccCCCCcccCCCCcccccCCChhhhcccc-hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChh
Q 004754 476 LLDQNPIGPAMIHPSETAAKGFSWKDLAEPG-VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSA 554 (732)
Q Consensus 476 l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~ 554 (732)
.+.++.++++.+++++++.+ .++++++.+.+..++++++.+.+.+|.+.++++.|.+. .
T Consensus 229 -----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~---------~ 288 (451)
T PF00083_consen 229 -----------AEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISN---------S 288 (451)
T ss_pred -----------cccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccc---------c
Confidence 00000000114566777543 46778888888888888888889999999998877653 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHH-HHHHhhcccchhhHHHHHHHHHHHHHHhhc
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLV-LSSVIKMGSVVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (732)
...+.+..+..+++.+++.+++||+|||++++.+..++.++.+.+. ................++...++.+++..+
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g 365 (451)
T PF00083_consen 289 ---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLG 365 (451)
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccc
Confidence 3344455677778888889999999999999998888887777665 111111110111334455566677778888
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004754 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLE 713 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~~~~ 713 (732)
++++.+.+++|++|++.|+++.+++..++++++++.+.+.+.+.+..+....+++++++++++.++.++++||||++++|
T Consensus 366 ~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ 445 (451)
T PF00083_consen 366 WGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLE 445 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHH
Confidence 89999999999999999999999999999999999999999999888866799999999999999999999999999999
Q ss_pred hhhhhh
Q 004754 714 VITEFF 719 (732)
Q Consensus 714 ~~~~~~ 719 (732)
|++++|
T Consensus 446 ei~~~f 451 (451)
T PF00083_consen 446 EIQEMF 451 (451)
T ss_pred HHHhhC
Confidence 999875
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.9e-32 Score=309.39 Aligned_cols=187 Identities=20% Similarity=0.316 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh--HHHH--HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPT--IEGL--IVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s--~igl--l~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligl 80 (732)
+.++++++++++++++|...++.+.|.+.++++.+.++. ..+. +.++.++++.++++++|+++||+|||+++.+++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 346677889999999999999999999999997532332 1222 257888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 81 VLYFIGGLVMLWSPNVYV--------LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 81 lL~aIgsll~a~a~s~~~--------LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
++++++++++++++|+.. ++++|+++|++.|+.++...+++.|++|+++||++.++.+.+..+|.+++..+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999864 889999999999999999999999999999999999999999999998886443
Q ss_pred HHHH------hhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhh
Q 004754 153 FGMS------LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWL 192 (732)
Q Consensus 153 l~~~------l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l 192 (732)
.... .....|||++|++.++++++. ++...++||||+|.
T Consensus 175 ~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~ 219 (490)
T PRK10642 175 VLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQ 219 (490)
T ss_pred HHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHH
Confidence 2221 123579999999977766653 34456789999864
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.5e-33 Score=312.46 Aligned_cols=176 Identities=30% Similarity=0.493 Sum_probs=157.0
Q ss_pred HHHHHHHHHhCCCCc---hhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 004754 27 GAVLYIKREFHLETE---PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (732)
Q Consensus 27 ~~~~~I~~dlgl~~s---~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R 103 (732)
+..|.+.+++++ + ..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.++++++++++.++++|
T Consensus 110 ~~~~~i~~e~~l--~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDL--VCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecc--eechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 456788899999 6 88999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 004754 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 104 ~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
++.|++.+..++...+++.|++|+++|+++.++.+.+..+|.+++++.. .... +||+.|++.++++++.+++ .+
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~---~wr~~~~~~~i~~~~~~~~-~~ 261 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA--YFIP---DWRWLQLAVSLPTFLFFLL-SW 261 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH--HHhh---HHHHHHHHHHHHHHHHHHH-HH
Confidence 9999999999999999999999999999999999999999999885443 2222 4999999999988876655 47
Q ss_pred hccCCchhhhhccccHHHHHHHHHhhc
Q 004754 184 YLPESPRWLVSKGRMLEAKKVLQSLRG 210 (732)
Q Consensus 184 ~~~esp~~l~~~~~~~~~~~~~~~~~~ 210 (732)
++||||+|+..+++.+++.+.+++..+
T Consensus 262 ~~~esp~~l~~~~~~~~a~~~l~~~~~ 288 (505)
T TIGR00898 262 FVPESPRWLISQGRIEEALKILQRIAK 288 (505)
T ss_pred hcCCChHHHHHCCCHHHHHHHHHHHHH
Confidence 899999999999998888877766543
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.7e-31 Score=289.48 Aligned_cols=186 Identities=28% Similarity=0.329 Sum_probs=168.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligll 81 (732)
++.|.+++++++..++++++...++.+.|.+.+++|. ++.+.|++.+++.++..++++++|+++||+|||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 4678899999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
+.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++. .........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~ 166 (406)
T PRK11551 89 LFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASV--IGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999944 344455667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004754 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
+||+.|++.+++.++.+++..+++||+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 196 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAF 196 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhH
Confidence 999999998877776666666778988653
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8.9e-32 Score=297.54 Aligned_cols=185 Identities=22% Similarity=0.201 Sum_probs=169.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
+|.+++.++++++++++|+..++.+.|.+.+++|+ +..+.|++.+++.+++++++++.|+++||+|||+++.++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 68889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----hc
Q 004754 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----MT 159 (732)
Q Consensus 84 aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l----~~ 159 (732)
+++++++++++|++.+++.|++.|++.|...+....++.|++|+++|++++++++.+.++|.++++........ .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999555433321 13
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+||++|.+.++++++..++.++++||+|+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 4699999999999888877777788999984
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.6e-31 Score=293.24 Aligned_cols=183 Identities=15% Similarity=0.152 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
++.+.+...+++++..++...++..+|.+.+++|+ +..+.|++.+++.+++.++++++|+++||+|||+++.++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 45666778888899999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 004754 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (732)
Q Consensus 84 aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~W 163 (732)
++++++++++++++.+++.|++.|++.|..++...+++.|++|+++|++++++.+.+..+|.++++ .......+..+|
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~--~~~~~l~~~~gw 176 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP--LVVGAIALHYGW 176 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHcccH
Confidence 999999999999999999999999999999999999999999999999999999999999999994 444445566799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 164 RLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 164 r~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
|+.|++.++++++..++.+++++|+|+
T Consensus 177 ~~~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 177 RYGMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 999999988877666666667888764
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.3e-31 Score=300.35 Aligned_cols=185 Identities=18% Similarity=0.004 Sum_probs=161.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
.+.++.++++++++...++..++.++|.+.+++|+ +..+.|++.+++.+++.++++++|+++||+|||+++.++.+++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 45678888999999999999999999999999999 8999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHh-----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004754 84 FIGGLVMLW-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 84 aIgsll~a~-----a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~ 158 (732)
++++++.++ +++++.+++.|++.|++.+...+...+++.||+|+++||+++++.+.+.++|.++++.+.......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 877766654 589999999999999999999999999999999999999999999999999999996654332221
Q ss_pred -ccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 159 -TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 159 -~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...+||..|.+.++++++..++.+++.+++|+
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 12269999999888888777666667777663
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2e-30 Score=284.49 Aligned_cols=168 Identities=23% Similarity=0.315 Sum_probs=153.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
..+..+..+.++++.++++.....+++|.+.+++|+ ++.+.+++.+++.+++.++++++|+++||+|||+++.++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~ 92 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVA 92 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 345667788899999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.++++++++++++++.++++|++.|++.|..++....++.|++|+++|++++++.+.+..+|.++++ .......+..+
T Consensus 93 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~--~l~~~l~~~~~ 170 (426)
T PRK12307 93 YSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA--YFMPSFAEAYG 170 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH--HHHHHHcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999984 34444456679
Q ss_pred hHHHHHHHHHHH
Q 004754 163 WRLMLGVLFIPS 174 (732)
Q Consensus 163 Wr~~~~i~~~l~ 174 (732)
||++|++..+..
T Consensus 171 w~~~f~i~~~~~ 182 (426)
T PRK12307 171 WRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHHHHHHH
Confidence 999998755433
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6.8e-30 Score=283.42 Aligned_cols=187 Identities=22% Similarity=0.277 Sum_probs=149.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHHH---HHHHHHHHHHHhHHHhhhhhCChHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIVA---MSLIGATCITTCSGAIADWLGRRPMLIV 78 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~-~s~s~igll~S---if~IG~~Ig~~~~g~LsDrfGrR~vLli 78 (732)
+++.+++.++++++++.+|...++.+.|.+.++++.+ .+..+.+...+ +.+++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4456777788999999999999999999999998521 14444444444 4445555999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHH
Q 004754 79 SSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYC 150 (732)
Q Consensus 79 gllL~aIgsll~a~a~s~~--------~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l 150 (732)
+.++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++||++.++.+.+..+|.+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988764 68899999999999999999999999999999999999999998888888854
Q ss_pred HHHHHHh------hccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 151 MVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 151 ~~l~~~l------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
....... ....|||++|++.++++++.+ +....+||+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~ 223 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQ 223 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCch
Confidence 4322211 125699999998888776643 33455677653
No 16
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=283.98 Aligned_cols=441 Identities=19% Similarity=0.209 Sum_probs=326.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
..|.+.+.+..+++.+.+..-....+.|.+...+++ +..+..++....+.+..+++..||.++|++|||+.+.+....
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 467788899999999999988888899999999998 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.++..++.+++||+..+++.|.+.|+|.|+ .|...++-.|..|..+|++.+-+. .++.+|.++...+. ...+.+.|
T Consensus 153 t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la--w~vm~~~g 228 (528)
T KOG0253|consen 153 TGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA--WGVMSNFG 228 (528)
T ss_pred HHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHH--HHHHHhhh
Confidence 999999999999999999999999999999 799999999999999999988887 99999999995444 44567789
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhhhhhcccc
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPAN 242 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (732)
|||.......+..+.+ ...+++||||||+..++++.++...++++...|...
T Consensus 229 wr~~l~~~~~pl~~~a-~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~q--------------------------- 280 (528)
T KOG0253|consen 229 WRYLLFTSSTPLMFAA-RFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQ--------------------------- 280 (528)
T ss_pred HHHHHHHHHhHHHHHH-HHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCC---------------------------
Confidence 9999988887666544 457889999999999999999999999988765321
Q ss_pred ccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccccccccc
Q 004754 243 DLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFS 322 (732)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (732)
-|+-.+..|.+.
T Consensus 281 -----------------------------------------------lplgvl~~s~~~--------------------- 292 (528)
T KOG0253|consen 281 -----------------------------------------------LPLGVLESSAID--------------------- 292 (528)
T ss_pred -----------------------------------------------CCcceeeeehhh---------------------
Confidence 000000000000
Q ss_pred cCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCcccc
Q 004754 323 VGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGMG 402 (732)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (732)
++|.|.+ |. |
T Consensus 293 --------------~~e~e~~----~~------~---------------------------------------------- 302 (528)
T KOG0253|consen 293 --------------RQEQEES----DL------D---------------------------------------------- 302 (528)
T ss_pred --------------hhhhhhh----ch------h----------------------------------------------
Confidence 0000100 00 0
Q ss_pred cCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCCC
Q 004754 403 IGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNPI 482 (732)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~p~ 482 (732)
T Consensus 303 -------------------------------------------------------------------------------- 302 (528)
T KOG0253|consen 303 -------------------------------------------------------------------------------- 302 (528)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcc----c----chhccc----C
Q 004754 483 GPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGV----G----VLLSNL----G 550 (732)
Q Consensus 483 ~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~----~----~~~~~l----~ 550 (732)
+.+.|.-+..+.+..+++.|..++++++.+.+++...++.+. ....+..+++. |. . ....+. .
T Consensus 303 ---~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg-~VLlttelfqs-gd~c~~~~r~~p~e~e~~~~c~ 377 (528)
T KOG0253|consen 303 ---DSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYG-SVLLTTELFQS-GDACPLYNRFLPTELETRANCP 377 (528)
T ss_pred ---hhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHH-HHHHHHHHHhc-cCccccchhcchhHHHhhhcCC
Confidence 000011122355778899999999999988888775444222 22222233322 21 0 000111 1
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHH
Q 004754 551 ISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCF 630 (732)
Q Consensus 551 ~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (732)
.+ ...-.....+.++...+|.++.++++||+|||+++..+++++.++.+.+..... .....++++. +-.|
T Consensus 378 ~s-~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~--------rn~~tvllf~-araf 447 (528)
T KOG0253|consen 378 LS-VAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT--------RNAYTVLLFT-ARAF 447 (528)
T ss_pred cc-chhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC--------cchhHHHHHH-HHHH
Confidence 11 234556677889999999999999999999999999988887776665544211 1122222222 2233
Q ss_pred hhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004754 631 VMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 631 ~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~ 710 (732)
..+.....|+|.+|++|+..|+++.|.|+.+.++|+++.|.++ ...+.. ...+..+++++++++.+.+.++=-|||||
T Consensus 448 isg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s-~sl~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 448 ISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS-TSLPIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred HhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc-eeehHHHHHHHHHHHHHHheeeeeccCCC
Confidence 3355567789999999999999999999999999999999999 444433 34577788888888888777655599998
Q ss_pred Ch
Q 004754 711 PL 712 (732)
Q Consensus 711 ~~ 712 (732)
.+
T Consensus 526 ~l 527 (528)
T KOG0253|consen 526 SL 527 (528)
T ss_pred CC
Confidence 64
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.7e-30 Score=275.02 Aligned_cols=171 Identities=16% Similarity=0.164 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 004754 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~ 94 (732)
+++..+|+..++.+.|.+.+++|. +..+.|++.+++.++..++.+++|.++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 456778888999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004754 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (732)
Q Consensus 95 s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~ 174 (732)
+++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++ ..........+||+.|++.++++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGG--PLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHH--HHHHHHHHhCCchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999994 44444456679999999999888
Q ss_pred HHHHHHHHhhccCCc
Q 004754 175 LIYFVLTIFYLPESP 189 (732)
Q Consensus 175 ~i~~~l~~~~~~esp 189 (732)
++..++.+++.||+|
T Consensus 159 ~~~~~~~~~~~~~~~ 173 (399)
T TIGR00893 159 IIWGVLWLKFIPDPP 173 (399)
T ss_pred HHHHHHhhheecCCC
Confidence 877766666677765
No 18
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=7.8e-30 Score=274.42 Aligned_cols=186 Identities=23% Similarity=0.291 Sum_probs=163.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.|....++++++++++++...++++.|.+.+++|+ +..+.|++.+++.++..++++++|.++||+|||++++++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 567888999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++++++.++++++.+++.|++.|++.+..++...+++.|++|+++|++++++.+.+..+|.++++............+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999954443332222235
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
||+.|.+.+++.++. ++....+||+|++
T Consensus 167 w~~~f~~~~~~~~~~-~~~~~~~~~~~~~ 194 (405)
T TIGR00891 167 WRALFFISILPIIFA-LWLRKNIPEAEDW 194 (405)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 999998876655553 3445667887643
No 19
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-31 Score=286.81 Aligned_cols=406 Identities=17% Similarity=0.198 Sum_probs=310.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligll 81 (732)
+.++-+.+.+++++...++.+-.++.+.|.+.++.++ |.++.|++.+++.+.|.++-+++|.++||.++|..+.++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLi 102 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLI 102 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHH
Confidence 3567899999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
+.+++.++++++++.+.+.+..++.|++.|+.+|.+...++.|+|+++||...+++++..++|..+.++...........
T Consensus 103 lsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~ 182 (448)
T COG2271 103 LSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG 182 (448)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999996655435556667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhhhhhccc
Q 004754 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPA 241 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (732)
+||..|++.++++++..++.++.++|+|+-. +-+ ++|+|.-|+.
T Consensus 183 ~w~~~f~~pgiiaiival~~~~~~rd~Pqs~---GLP---------------------------------~ie~~~~d~~ 226 (448)
T COG2271 183 GWRAAFYFPGIIAIIVALILLFLLRDRPQSE---GLP---------------------------------PIEEYRGDPL 226 (448)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCC---------------------------------CHHHhhcCch
Confidence 9999999999999999999899999998421 100 0111110000
Q ss_pred cccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccccccccc
Q 004754 242 NDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMF 321 (732)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (732)
++
T Consensus 227 e~------------------------------------------------------------------------------ 228 (448)
T COG2271 227 EI------------------------------------------------------------------------------ 228 (448)
T ss_pred hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCccc
Q 004754 322 SVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGM 401 (732)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (732)
+ +||
T Consensus 229 ----------~-~~~----------------------------------------------------------------- 232 (448)
T COG2271 229 ----------Y-EEE----------------------------------------------------------------- 232 (448)
T ss_pred ----------h-hhh-----------------------------------------------------------------
Confidence 0 000
Q ss_pred ccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCC
Q 004754 402 GIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNP 481 (732)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~p 481 (732)
T Consensus 233 -------------------------------------------------------------------------------- 232 (448)
T COG2271 233 -------------------------------------------------------------------------------- 232 (448)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccCCCCcccccCCChhhhc-ccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHH
Q 004754 482 IGPAMIHPSETAAKGFSWKDLA-EPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLI 560 (732)
Q Consensus 482 ~~~~~~~~s~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 560 (732)
++.+..+.++++ +.-.+.+.++.+.+........=++++.|.|.++.+ ..|++...+...+
T Consensus 233 ----------~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e--------~k~~s~~~a~~a~ 294 (448)
T COG2271 233 ----------KENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE--------VKGFSLVKANWAI 294 (448)
T ss_pred ----------ccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------hcCCCHHHHHHHH
Confidence 000001233333 333455666677776666666778999999999988 3455554444444
Q ss_pred HHHHHHHHHHHHHHHhhhhhcc--cchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHH-Hhhcccch
Q 004754 561 SGITTLLMLPSIAVAMRLMDIS--GRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCC-FVMGFGPI 637 (732)
Q Consensus 561 ~~i~~~~~l~~~~i~g~l~d~~--grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 637 (732)
..+-+++++|++++||++||+ |||..+.+...+.++..++. ++.. ..+. ..+..++++..+ +..+...+
T Consensus 295 -~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~---~w~~---~~~~-~~l~~~~l~~iGf~IyGPqmL 366 (448)
T COG2271 295 -SLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL---YWLA---PNGS-YLLDAILLFIIGFLIYGPQML 366 (448)
T ss_pred -HHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH---HHcC---CCcc-HHHHHHHHHHHHHHHhhHHHH
Confidence 468899999999999999995 78866544332222222221 2211 1122 222233333333 33334445
Q ss_pred hhhhhccCCCccchhhHHHHHHHHHHH-HHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhcc
Q 004754 638 PNILCSEIFPTRVRGICIAICALVFWI-GDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi~~~~~~i-g~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~ 705 (732)
....+.|..|++.-|++.|+...+.++ |+..+....|++.|..||.+.|.++.+.++++.++......
T Consensus 367 iGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 367 IGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 567788999999999999999999999 99999999999999999999999999888888777665554
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=5.1e-30 Score=271.63 Aligned_cols=178 Identities=20% Similarity=0.195 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~a 84 (732)
|.+++...+..+..+. ...+++.+|++.+++|+ +..+.|++.+++.+++.++++++|.++||+|||+++.++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~ 79 (377)
T TIGR00890 3 WYVLVGTVIMCFTSGY-VYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYG 79 (377)
T ss_pred EEEeHHHHHHHHHhhH-HhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHH
Confidence 4444455555555554 45678899999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 004754 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 85 Igsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr 164 (732)
++.++++++++++.++++|++.|++.+..++.....+.+++| ++|+++.++...+..+|.++++ +......+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 156 (377)
T TIGR00890 80 LGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILS--PLITSVINLEGVP 156 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHH--HHHHHHHhcccHH
Confidence 999999999999999999999999999998888889999998 6799999999999999988763 3333344566999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 004754 165 LMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 165 ~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+.|++.++++++..++.+++++++
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 157 AAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHheecC
Confidence 999999998888776666666654
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=7.9e-29 Score=280.50 Aligned_cols=185 Identities=17% Similarity=0.170 Sum_probs=171.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004754 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligl 80 (732)
|.+.|.+++.++++.++...|.+.++.++|.+.+++|. +..+.+|+.+.+.+++.++.+++|+++||+|||++++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 67889999999999999999999999999999999999 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004754 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 81 lL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~f-P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~ 159 (732)
++++++++++++++|++.++++|+++|++.+..++.....+.+++ |+++|++++++......+|.++| |..+..+.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~g--p~lgg~l~~ 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFG--PLVGGILLE 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhc
Confidence 999999999999999999999999999999999998888887776 78999999999999999999999 566667777
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+||+.|++...++++.+++.++++|+.|
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 889999999998888887777778888765
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=99.98 E-value=8.9e-29 Score=269.79 Aligned_cols=182 Identities=19% Similarity=0.205 Sum_probs=157.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
++|..++.+.++.++.........+++|.+.+++|. +..+.|++.+++.+++.++++++|.++||+|||+++..+.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 345555666666565555545556678999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++++++.+++|++.++++|++.|++.+..++...+++.|++|+++|++++++.+.+..+|.+++ +.....+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig--~~l~~~l~~~~g 161 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG--LPLGRVIGQYLG 161 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH--hhHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 444555566679
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
||++|++.++++++..++.++++||.
T Consensus 162 w~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 162 WRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988877666655566654
No 23
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=4.1e-29 Score=278.48 Aligned_cols=185 Identities=21% Similarity=0.281 Sum_probs=149.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--CCCCchhHHHHHH-----HHHHHHHHHHHHhHHHhhhhhCChH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLY-IKREF--HLETEPTIEGLIV-----AMSLIGATCITTCSGAIADWLGRRP 74 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-I~~dl--gl~~s~s~igll~-----Sif~IG~~Ig~~~~g~LsDrfGrR~ 74 (732)
+.+.+.+.++++++++++|...++.+.|. +.+++ +. ++. .+++. ++.+++..+++++.|+++||+|||+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV--SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 34567788889999999999999988774 55665 55 444 45543 3455667899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHH
Q 004754 75 MLIVSSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMF 146 (732)
Q Consensus 75 vLligllL~aIgsll~a~a~s~~--------~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~a 146 (732)
+++++.++++++++++++++++. .++++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999987 5888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh------hccchhHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004754 147 LAYCMVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 147 Ig~l~~l~~~l------~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
++......... ....+||++|++.+++.++. .+....+||+|+|
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~ 225 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEF 225 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhH
Confidence 88544332211 12469999999888776553 3334557888754
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.98 E-value=6.8e-29 Score=277.28 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=155.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.|.++...++.......++..++..+|++.++ |+ +..+.|++.+++.++++++++++|+++||+|||++++++.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~ 102 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL 102 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHH
Confidence 346666777778888888888888899999988 99 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004754 83 YFIGGLVMLWSP----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 83 ~aIgsll~a~a~----s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~ 158 (732)
.+++++++++.+ +++.+++.|++.|++.|..++.....+.+++|+++|++++++.+.+..+|..+++.+ ......
T Consensus 103 ~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l-~~~~~~ 181 (452)
T PRK11273 103 AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL-FLLGMA 181 (452)
T ss_pred HHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH-HHHHHH
Confidence 999998888763 688889999999999999988888899999999999999999999999887543222 111122
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...+||+.|++.++++++..++.++++||+|+
T Consensus 182 ~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~ 213 (452)
T PRK11273 182 WFNDWHAALYMPAFAAILVALFAFAMMRDTPQ 213 (452)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHccCCHh
Confidence 23499999999998888877777788888764
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=9.4e-29 Score=270.90 Aligned_cols=168 Identities=19% Similarity=0.146 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHH
Q 004754 19 GWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYV 98 (732)
Q Consensus 19 ~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~ 98 (732)
......+++++|.+.+++|+ +..+.|++.+++.+++.++++++|+++||+|||+++..+++....+.+.....++++.
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 44456778899999999999 8999999999999999999999999999999998876555544444333333379999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004754 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 99 LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
++++|++.|++.+.. +.....+.|++|+++|++++++.+.+..+|.++++ .....+.+..+||++|++.++++++..
T Consensus 82 l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~--~~~~~l~~~~gWr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 82 LLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFAL--AAGLKIYTAGGLQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 999999999999864 56666679999999999999999999999999994 444555667899999999999988888
Q ss_pred HHHHhhccCCchh
Q 004754 179 VLTIFYLPESPRW 191 (732)
Q Consensus 179 ~l~~~~~~esp~~ 191 (732)
++.++++||+|++
T Consensus 159 ~~~~~~lp~~p~~ 171 (368)
T TIGR00903 159 ILVLAALPALPFQ 171 (368)
T ss_pred HHHHHHcCCCCCC
Confidence 7778889998764
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=2.9e-28 Score=272.88 Aligned_cols=184 Identities=23% Similarity=0.343 Sum_probs=161.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.|..+..++++.++++++...+++.+|.+.+++|+ +..+.+++.+++.+++.+++++.|+++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345677888899999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++++++.++++++.+++.|++.|++.+..++....++.|++|+++|++++++...+..+|.+++ +.......+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~--~~~~~~l~~~~~ 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVA--AQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999 444455566789
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchh
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~ 191 (732)
||+.|++..++.++ .++....+||++++
T Consensus 173 w~~~f~~~~~~~~~-~~~~~~~~p~~~~~ 200 (496)
T PRK03893 173 WRALFFIGILPIIF-ALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhCCCchhh
Confidence 99999875554433 33334456766543
No 27
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.4e-28 Score=267.15 Aligned_cols=180 Identities=21% Similarity=0.280 Sum_probs=174.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
..+..++.++++.|..+.....+.+++|.+.+|+|+ +....|++.|+|.+++.+++++...+.||+.||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 457788899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
+.++.+++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+.+++.++| ++++.++.+..|
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~G 165 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999 888899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
||+.|++.+.++++.++..+..+|
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999988888898
No 28
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=3.3e-28 Score=267.07 Aligned_cols=166 Identities=17% Similarity=0.245 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~a 84 (732)
|.....++++.+...+. ..+++++|.+.+++|+ |..+.|++.+++.+++.+++++.|+++||+|||+++..++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 44445555555554444 6678999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chh
Q 004754 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSW 163 (732)
Q Consensus 85 Igsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~W 163 (732)
++.++++++++++.++++|++.|++.+...+....++.+++| ++|+++++++..+..+|..+++.+. ..+.+. .+|
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~--~~l~~~~~~w 162 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT--PWLVQHSETW 162 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCH
Confidence 999999999999999999999999999999999999999998 7899999999999989998885443 333343 389
Q ss_pred HHHHHHHHHHHHH
Q 004754 164 RLMLGVLFIPSLI 176 (732)
Q Consensus 164 r~~~~i~~~l~~i 176 (732)
|+.+.+.+++.++
T Consensus 163 ~~~~~~~~~~~~~ 175 (393)
T PRK09705 163 YQTLAWWALPAVV 175 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 9988776665544
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.3e-28 Score=263.42 Aligned_cols=187 Identities=28% Similarity=0.370 Sum_probs=167.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.+.+++.+.+..+..+++....+..+|.+.+++|. +..+.|++.+++.++..++.++.|+++||+|||+++.++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 14 YQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 356677777788889999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++.+++.+.++++.+++.|++.|++.+..++...+++.|++|+++|++++++.+.+..+|.++++ .......+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~g 169 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGG--FLAGWLIPVFG 169 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHH--HHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999994 44455556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCchhhh
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLV 193 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~ 193 (732)
||+.|++.++++++..++.++++||+|++..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLV 200 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHH
Confidence 9999999877777767677778899876543
No 30
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.97 E-value=8.5e-31 Score=287.15 Aligned_cols=447 Identities=21% Similarity=0.228 Sum_probs=314.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC-----CchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFH-LE-----TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlg-l~-----~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~v 75 (732)
|+-...++++..+.+.++||..+++.+.|-+...|. -+ .++...+++..+..+|.++|++++|++.||+|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 345677888999999999999999999887777652 21 245577889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 76 LIVSSVLYFIGGLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 76 LligllL~aIgsll~a~a~-------s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
+...++++.++++++++.. -...+...|+++|+|.|+-||+..+..+|....++||...+.......+|...|
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999887742 236778889999999999999999999999999999999998888888888877
Q ss_pred HHHHHHHHhhc-------------cchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhcccc-HHHHHHHHHhhcCcCh
Q 004754 149 YCMVFGMSLMT-------------APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRM-LEAKKVLQSLRGREDV 214 (732)
Q Consensus 149 ~l~~l~~~l~~-------------~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~-~~~~~~~~~~~~~~~~ 214 (732)
.++.......- ..=||..|.+.+++.+..+. ..+.+|||++|-....++ +.+. ++.
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~~~~a~---~d~------ 266 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYTALVSKKLKQAA---GDM------ 266 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHHHHhhcCHhhhh---hcc------
Confidence 66655544321 12499999999988887554 467799998773111100 0000 000
Q ss_pred hhHHHHHHhhhccccccchhhhhhccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchh
Q 004754 215 AGEMALLVEGLGVGGETSLEEYIIGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVT 294 (732)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 294 (732)
++.+.+
T Consensus 267 ---------------------------------------~k~~~~----------------------------------- 272 (538)
T KOG0252|consen 267 ---------------------------------------KKVLSV----------------------------------- 272 (538)
T ss_pred ---------------------------------------cccccc-----------------------------------
Confidence 000000
Q ss_pred ccccccccCCCCCCCccccccccccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccC
Q 004754 295 LFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDM 374 (732)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (732)
+.++| . +. +.+.
T Consensus 273 -------------------------------------~~~~~-----~------------------------~~--~~~~ 284 (538)
T KOG0252|consen 273 -------------------------------------DIEAE-----S------------------------TA--ESDV 284 (538)
T ss_pred -------------------------------------ccchh-----h------------------------cc--ccCC
Confidence 00000 0 00 0000
Q ss_pred CCCCCCCCcccccCccccCCCCCCcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccc
Q 004754 375 VPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVP 454 (732)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~ 454 (732)
.+|
T Consensus 285 ~~~----------------------------------------------------------------------------- 287 (538)
T KOG0252|consen 285 PPP----------------------------------------------------------------------------- 287 (538)
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHH
Q 004754 455 VGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTP 534 (732)
Q Consensus 455 ~g~~~~~~~~l~~~~~~~~~~l~~e~p~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 534 (732)
++....|..+|..+ .-+.+++.....+..-..++..+.+..
T Consensus 288 --------------------------------------~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s 328 (538)
T KOG0252|consen 288 --------------------------------------SNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQS 328 (538)
T ss_pred --------------------------------------ccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHH
Confidence 00011233333322 224455555555555556888899999
Q ss_pred HHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccch
Q 004754 535 QILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVV 614 (732)
Q Consensus 535 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 614 (732)
.+++..|+.....+. ...-..+-....+...+.++|..+..+++|++|||++.+.++.++.+..+++...+.-..
T Consensus 329 ~I~~~ig~~~~~~~~-~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~---- 403 (538)
T KOG0252|consen 329 VIFSAIGVIPSANTY-HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE---- 403 (538)
T ss_pred HHHHhhccCCCcchH-HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc----
Confidence 999988766422222 011112333344556667788999999999999999999999999888887776433110
Q ss_pred hhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH-----hhchhHHHHHH
Q 004754 615 HASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN-----SVGLAGVFGMY 689 (732)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~-----~~g~~~~f~~~ 689 (732)
.....+++..+..++..+|.+....++.+|+||+++|+++.|+..+++-+|++++...+.++.+ ..|.+.+|+++
T Consensus 404 ~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~ 483 (538)
T KOG0252|consen 404 NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIIL 483 (538)
T ss_pred ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHH
Confidence 1111222333333444455666677888999999999999999999999999999999999999 78999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChhhhhhhhhcc
Q 004754 690 AVVCVISWIFVFIKVPETKGMPLEVITEFFAVG 722 (732)
Q Consensus 690 ~~~~~i~~i~~~~~~~et~~~~~~~~~~~~~~~ 722 (732)
+++++++.++. +++||||++++|++++.....
T Consensus 484 ~~~~~~gi~~T-~l~pEtk~~~leei~~e~~~~ 515 (538)
T KOG0252|consen 484 AGCMLLGILFT-LLIPETKGKSLEEISNEEESN 515 (538)
T ss_pred HHHHHHhHhee-EEeecccccCHHHhcChhhcc
Confidence 99999986554 568899999999986655443
No 31
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=1.1e-27 Score=265.91 Aligned_cols=167 Identities=23% Similarity=0.337 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHH-HHHHH-----HHHHHHHHHhHHHhhhhhCChHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGL-IVAMS-----LIGATCITTCSGAIADWLGRRPMLI 77 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igl-l~Sif-----~IG~~Ig~~~~g~LsDrfGrR~vLl 77 (732)
++.....++++++++.+|+..++.+.|.+.++++. +..+.+. ..+.. .++..++++++|.++||+|||++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 90 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP--AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLI 90 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHH
Confidence 45678889999999999999999999999999998 5555443 33322 2223468899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHH
Q 004754 78 VSSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAY 149 (732)
Q Consensus 78 igllL~aIgsll~a~a~s~~--------~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~ 149 (732)
++++++++++++++++++++ .++++|+++|++.|...+....++.|++|+++|++++++.+.+..+|..+++
T Consensus 91 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 91 VTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877 4688999999999999999999999999999999999999988888887775
Q ss_pred HHHHHHHh------hccchhHHHHHHHHH
Q 004754 150 CMVFGMSL------MTAPSWRLMLGVLFI 172 (732)
Q Consensus 150 l~~l~~~l------~~~~~Wr~~~~i~~~ 172 (732)
.+...... ....+||++|++..+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 44333211 246799999987544
No 32
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=4.9e-28 Score=269.06 Aligned_cols=183 Identities=14% Similarity=0.108 Sum_probs=155.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
++.++...++++.....++..+....|++.+ +|+ +..+.+++.+++.++..++++++|+++||+|||+++.++.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHH
Confidence 4666777778888888888888888888876 588 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004754 84 FIGGLVMLWS----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 84 aIgsll~a~a----~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~ 159 (732)
+++.+++.+. .+++.+.+.|++.|++.|..++.....+.|++|+++|++++++.+.+..+|..+++...... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~ 180 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAW 180 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHH
Confidence 9988887764 46778889999999999999998999999999999999999999999999998884433222 223
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+||+.|++.++++++..++.++++||+|+
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~ 211 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQ 211 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 4589999999999888877777778888764
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=6e-27 Score=255.31 Aligned_cols=177 Identities=17% Similarity=0.251 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
+....++.++.+.......+.+|.+.+++|. +..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 3455567777788888888999999999999 89999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004754 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 88 ll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~ 167 (732)
++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..++ +.......+..+||+.|
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~gwr~~f 160 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLG--IPLGTYLSQEFSWRYTF 160 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHh--ccHHHHHhhhccHHHHH
Confidence 9999999999999999999999999989999999999999999999999999999999998 44455556667999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 004754 168 GVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~es 188 (732)
.+.++++++.+++.++++||.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~ 181 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDI 181 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 999988877666656667765
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=5.2e-27 Score=261.04 Aligned_cols=180 Identities=21% Similarity=0.349 Sum_probs=165.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aI 85 (732)
.+++.+.++.++..++....++++|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 79 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTL 79 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHH
Confidence 356677889999999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004754 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 86 gsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~ 165 (732)
+.++++++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +.......+..+||+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g--~~~~~~l~~~~~w~~ 157 (485)
T TIGR00711 80 GSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALG--PTLGGWIIENYHWRW 157 (485)
T ss_pred HHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhh--hccHhHhccCcCcee
Confidence 999999999999999999999999999999999999999999999999999999999999999 445556667789999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCc
Q 004754 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|++.++++++..++.++++||++
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhhHHHHHHHHHHHHHcCCcc
Confidence 999998888877777777777653
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=2.2e-28 Score=259.29 Aligned_cols=174 Identities=21% Similarity=0.187 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh
Q 004754 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~ 92 (732)
+++++..+++..++.++|++.+++|. +..+.|++.+++.++..++++++|+++||+|||++++++.++.+++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 45678888999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004754 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 93 a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
+++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.. .........+||+.|++.++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPL-VLFGIAELYSWHWVFIVPGI 158 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHH-HHHHHHhcCCchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999521 22333455699999999988
Q ss_pred HHHHHHHHHHhhccCCc
Q 004754 173 PSLIYFVLTIFYLPESP 189 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp 189 (732)
++++..++.+++.+|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHheeeCCCc
Confidence 88777666677777765
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=8.3e-28 Score=268.38 Aligned_cols=185 Identities=16% Similarity=0.235 Sum_probs=163.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HhCCCCchhHHHHHHHHHHHHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKR----------------------EFHLETEPTIEGLIVAMSLIGATCI 59 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~----------------------dlgl~~s~s~igll~Sif~IG~~Ig 59 (732)
+.+|.++.+++++..+...|+..++.+.+.+.+ ++++ +..+.|++.+++.+++.++
T Consensus 15 ~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 15 SFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQIII 92 (465)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHHH
Confidence 357889999999999999999999999888876 7888 8999999999999999999
Q ss_pred HHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHH
Q 004754 60 TTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP 137 (732)
Q Consensus 60 ~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a--~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~ 137 (732)
++++|+++||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+..++....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 9999999999999999999999999998887654 56888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 138 QFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 138 ~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+..+|.++++ .....+.+. .+||+.|++.++++++..++.+++.+|+|+
T Consensus 173 ~~~~~~g~~i~~--~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 173 TSGFQLGTFIFL--PISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHH--HHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 999999999994 444445556 499999999999888877766666777764
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=6.3e-26 Score=249.55 Aligned_cols=183 Identities=14% Similarity=0.117 Sum_probs=157.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligll 81 (732)
|+.|..++.+.+..++.........+.+|.+.+++|. ++++.|+..+++.++..+++++.|.++||+|||+++..+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 3456665666666666666655666678999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 82 LYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 82 L~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
+.+++.+++.++++++.+++.|++.|++.|...+...+++.|++|+++|++++++...+.++|.+++ +.....+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig--~~l~~~l~~~~ 171 (394)
T PRK10213 94 LLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA--APLGSFLGELI 171 (394)
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 55556666778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 162 SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+||+.|++.++++++..++.+..+||+
T Consensus 172 gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 172 GWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999999998887776554444445654
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.96 E-value=5e-26 Score=249.19 Aligned_cols=183 Identities=18% Similarity=0.261 Sum_probs=161.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.++..+.+.+..++..+....+.+.+|.+.+++|. +..+.++..+++.+++.+++++.|.++||+|||++++++.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 457778888888888888999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..++ +.......+..+
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLG--PLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHccC
Confidence 999999999999999999999999999999889999999999999999999999888888888888 444444555679
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
||+.|++.++++++.++..++.+||++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999988888776665556677653
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=2.9e-26 Score=249.78 Aligned_cols=168 Identities=15% Similarity=0.187 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
..-+..+.+..++...+.....+++|. +.+++|. +..+.|++.+++.+++.++++++|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 344556777888888888888888886 6789999 8999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhh--------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 84 FIGGLVMLWS--------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 84 aIgsll~a~a--------~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
+++.+++.++ .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g--~~l~~ 169 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIG--APLGV 169 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHH--HHHHH
Confidence 8876665543 2577899999999999999999999999999999999999999999999999998 45555
Q ss_pred HhhccchhHHHHHHHHHHHHH
Q 004754 156 SLMTAPSWRLMLGVLFIPSLI 176 (732)
Q Consensus 156 ~l~~~~~Wr~~~~i~~~l~~i 176 (732)
.+....+||+++++..+++++
T Consensus 170 ~l~~~~g~~~~~~~~~~~~~~ 190 (399)
T PRK05122 170 LLYHWGGLAGLGLLIMLLALL 190 (399)
T ss_pred HHHHcccHHHHHHHHHHHHHH
Confidence 556677999998876665544
No 40
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=2.7e-26 Score=251.26 Aligned_cols=175 Identities=11% Similarity=0.074 Sum_probs=154.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+++...+.++++.++.+.+...++..+|.+.+++|+ +.++.+++.+++.+++.++++++|+++||+|||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 356667778889999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.|..++...+++.|++|+++|+.++++.+....+|..+++..... ......+
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-l~~~~~g 160 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAY-LLARSIE 160 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccc
Confidence 999999999999999999999999999999999999999999999999999999888888888888543322 2234569
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 004754 163 WRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l 180 (732)
||+.|.+.+++.++.+++
T Consensus 161 w~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 161 WYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988877765543
No 41
>PRK10504 putative transporter; Provisional
Probab=99.96 E-value=1.9e-25 Score=249.33 Aligned_cols=178 Identities=22% Similarity=0.337 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIg 86 (732)
..++++++.++..++...+++.+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 45667788899999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004754 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 87 sll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~ 166 (732)
.+++.++++++.++++|+++|++.+...+...+++.|++|+++|+.+.++......+|.+++ +.......+..+||+.
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~~~g~l~~~~gw~~~ 166 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG--PALGGLLVEYASWHWI 166 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHhhccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 4545555667799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCC
Q 004754 167 LGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~es 188 (732)
|.+...++++..++.....|+.
T Consensus 167 f~~~~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 167 FLINIPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 9998887777666666666654
No 42
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=2.6e-26 Score=252.54 Aligned_cols=384 Identities=15% Similarity=0.082 Sum_probs=272.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a 91 (732)
.++.++..+......+.+|.+.++++. +..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.++..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~ 100 (417)
T PRK10489 23 FIARFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLA 100 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHH
Confidence 334555666667778888999999998 889999999999999999999999999999999999988887777666544
Q ss_pred h-----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004754 92 W-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 92 ~-----a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~ 166 (732)
+ .++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|.+++ +.......+..+|++.
T Consensus 101 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~g~l~~~~~~~~~ 178 (417)
T PRK10489 101 LNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVIS--PALGGLLIAAGGVAWN 178 (417)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhH--HHHHHHHHHHHhhHHH
Confidence 2 56788999999999999999889999999999999999999999999999999999 4444555556689999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhhhhhcccccccc
Q 004754 167 LGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAA 246 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (732)
|++.++..++..+ ..+.+|++|+.. +. .+... .
T Consensus 179 ~~~~~~~~~~~~~-~~~~l~~~~~~~----~~------------~~~~~---~--------------------------- 211 (417)
T PRK10489 179 YGLAAAGTFITLL-PLLRLPALPPPP----QP------------REHPL---R--------------------------- 211 (417)
T ss_pred HHHHHHHHHHHHH-HHHhCCCCCCCC----cc------------cccch---H---------------------------
Confidence 9887776665443 345566543210 00 00000 0
Q ss_pred ccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccccccccccCCC
Q 004754 247 DQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGN 326 (732)
Q Consensus 247 ~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (732)
T Consensus 212 -------------------------------------------------------------------------------- 211 (417)
T PRK10489 212 -------------------------------------------------------------------------------- 211 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCcccccCCc
Q 004754 327 QPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGG 406 (732)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (732)
+
T Consensus 212 ---------~---------------------------------------------------------------------- 212 (417)
T PRK10489 212 ---------S---------------------------------------------------------------------- 212 (417)
T ss_pred ---------H----------------------------------------------------------------------
Confidence 0
Q ss_pred ccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCCCCccc
Q 004754 407 WQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAM 486 (732)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~p~~~~~ 486 (732)
T Consensus 213 -------------------------------------------------------------------------------- 212 (417)
T PRK10489 213 -------------------------------------------------------------------------------- 212 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHH
Q 004754 487 IHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTL 566 (732)
Q Consensus 487 ~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~ 566 (732)
.+..++.+++++..+..++..++.. ....+..+.|.++++ .+|.++...+ ++..+..+
T Consensus 213 --------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~~~--------~~g~~~~~~g-~~~~~~~~ 270 (417)
T PRK10489 213 --------LLAGFRFLLASPVVGGIALLGGLLT-----MASAVRVLYPALADE--------VWQMGAAQIG-LLYAAVPL 270 (417)
T ss_pred --------HHHHHHHHHcChHHHHHHHHHHHHH-----HHHhHHHhhHHHHHh--------ccCCChhHhH-HHHHHHHH
Confidence 0001111222222222222211111 123456678888876 2344444444 44456788
Q ss_pred HHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc-cchhhhhhccC
Q 004754 567 LMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF-GPIPNILCSEI 645 (732)
Q Consensus 567 ~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~ 645 (732)
+.+++.++.+++.||.++++.+..+..+..++++.+.+. .+ .....+..+..+++.+. .+....++.|.
T Consensus 271 g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (417)
T PRK10489 271 GAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM--------PM--WILAVLCLALFGYLSAISSLLQYTLLQTQ 340 (417)
T ss_pred HHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc--------ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999877777776666555554443321 01 11222222222333333 23445778999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChhhhhh
Q 004754 646 FPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLEVITE 717 (732)
Q Consensus 646 ~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~~~~~~~~ 717 (732)
+|++.|+++.|+++....+|..+++.+.|++.+..|+...++.++++.++..++....+|++|+++.|++++
T Consensus 341 ~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (417)
T PRK10489 341 TPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEV 412 (417)
T ss_pred CCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccC
Confidence 999999999999999999999999999999999999988999888888888788888889999998887754
No 43
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=5.8e-26 Score=247.20 Aligned_cols=166 Identities=14% Similarity=0.181 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~a 84 (732)
..++.+.++.++.........+.+|. +.+++|. |..+.|++.+++.+++.++++++|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACG 92 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Confidence 34455556666777777777788885 6789999 89999999999999999999999999999999999999988877
Q ss_pred HHHHHHHh--------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 85 IGGLVMLW--------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 85 Igsll~a~--------a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
++.+.+.+ .++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+...|.+++ +.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g--~~~~~~ 170 (392)
T PRK12382 93 LAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG--APLGLL 170 (392)
T ss_pred HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH--HHHHHH
Confidence 66543322 35789999999999999999999999999999999999999999999999999999 444555
Q ss_pred hhccchhHHHHHHHHHHHH
Q 004754 157 LMTAPSWRLMLGVLFIPSL 175 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~ 175 (732)
.....+||+.+.+..++.+
T Consensus 171 l~~~~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 171 LHSHFGFAALALTTMVLPL 189 (392)
T ss_pred HHhccChHHHHHHHHHHHH
Confidence 5566799988776554433
No 44
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=1.2e-25 Score=241.20 Aligned_cols=179 Identities=19% Similarity=0.298 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIg 86 (732)
.+..+.+..++.......+.+.+|.+.+++|. +..+.|++.+++.++..++++++|.++||+|||+++.++.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 33444444566777888888999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004754 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 87 sll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~ 166 (732)
.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|.++++ .......+..+||++
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~--~~~~~l~~~~~~~~~ 161 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAP--LLGGYILVWLSWHAI 161 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999994 444455566799999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCc
Q 004754 167 LGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~esp 189 (732)
|++.++++++..++.+++.||++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC
Confidence 99988888777666666677653
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=9.5e-26 Score=238.45 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~ 90 (732)
+.++.++..+......+.+|.+..+++. +..+.|++.+++.++..++++++|.++||+|||++++++.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 3456677777778888889999999998 89999999999999999999999999999999999999999999988888
Q ss_pred Hhhh-----hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004754 91 LWSP-----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 91 a~a~-----s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~ 165 (732)
.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +.....+.+..+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVG--PGIGGLMYATLGIKW 159 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHH--HHHHHHHHHHhhHHH
Confidence 8887 999999999999999999999999999999999999999999999999999999 444555556679999
Q ss_pred HHHHHHHHHHHHHHH
Q 004754 166 MLGVLFIPSLIYFVL 180 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l 180 (732)
.|++.++..++..++
T Consensus 160 ~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 160 AIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998887766654433
No 46
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=4.5e-26 Score=257.18 Aligned_cols=182 Identities=16% Similarity=0.095 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~a 84 (732)
+..+....+..++..++...+.+.+|.+.+++|+ +..+.+++.+++.+++.++++++|+++||+|||+++.++.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3445555566677777777788889999999999 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhc---
Q 004754 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LMT--- 159 (732)
Q Consensus 85 Igsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~--l~~--- 159 (732)
++.++++++++++.++++|++.|++.+... ....++.|++|+++||+++++......+|..+++....... ...
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999988754 45678999999999999999998777777777644332211 111
Q ss_pred --cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 160 --APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 --~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+||++|++.++++++..++.+++.++.|
T Consensus 192 ~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 192 PSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 248999999999988877666555444443
No 47
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2e-26 Score=261.72 Aligned_cols=165 Identities=32% Similarity=0.515 Sum_probs=144.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~al 120 (732)
+.....+..+++++|.++|++++|.++||+|||+++++++++.+++.+++++++|++.+++.|++.|++.++.+.+...+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHH
Q 004754 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE 200 (732)
Q Consensus 121 I~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~ 200 (732)
++|++++++|+.+.++ ......|..++ ++....... +||+.+++..+++++.+++ +++.||||||+..+++.++
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~--~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLML--PAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHH--HHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHH
Confidence 9999999999999999 55555555554 233332222 9999999999999987665 6667799999999999999
Q ss_pred HHHHHHHhhcC
Q 004754 201 AKKVLQSLRGR 211 (732)
Q Consensus 201 ~~~~~~~~~~~ 211 (732)
+.+.+++..+.
T Consensus 270 a~~~l~~~a~~ 280 (521)
T KOG0255|consen 270 AIKILKKIAKL 280 (521)
T ss_pred HHHHHHHHHhh
Confidence 99888887654
No 48
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=2.9e-25 Score=241.78 Aligned_cols=149 Identities=17% Similarity=0.145 Sum_probs=136.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004754 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligl 80 (732)
|++...-+..+.++.++.+...+.+++.+|.+.+++|. +..+.|++.+++.+++.++++++|+++||+|||+++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~ 78 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS 78 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 44444456667788888999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004754 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 81 lL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~ 151 (732)
++.+++.++++++++++.++++|++.|++.+...+...+.+.+..++++|++++++.+.+..+|..+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 149 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLL 149 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888899999999999999999999999999443
No 49
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=1.6e-25 Score=239.73 Aligned_cols=173 Identities=18% Similarity=0.227 Sum_probs=143.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHH-HHHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIV-SSVLYFIGGLVM 90 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLli-gllL~aIgsll~ 90 (732)
+.+++.++......+.+|. +.+++|. +..+.|++.+++.+...+.+++.|.++||+|||+.+++ +.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 4577778888888888875 6788999 89999999999999999999999999999999887654 556666777888
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhh--hhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLL--NTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~--~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~ 168 (732)
.++++++.+++.|++.|.+.+...|...+++.|+.|++.|+.. .++...+.++|.+++ +.......+..+||+.|+
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig--~~~~~~l~~~~~~~~~f~ 159 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIG--PPLAFWLALGFGFTVMFL 159 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHh--hhHHHHHHHhcccHHHHH
Confidence 8999999999999999988888888888999999987777654 577788888999998 444555556679999999
Q ss_pred HHHHHHHHHHHHHHhhccCCc
Q 004754 169 VLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 169 i~~~l~~i~~~l~~~~~~esp 189 (732)
+.++++++..++.++++||+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 160 TAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 999888777766667788865
No 50
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.96 E-value=3.9e-26 Score=256.15 Aligned_cols=179 Identities=18% Similarity=0.116 Sum_probs=151.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.|.+++.++++......+...++..+|.+.+++|. +..+.+++.+.+.++..++.+++|+++||+|||++++.+.++
T Consensus 16 ~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 16 WGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred cchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 357777777777666555666678889999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHH-HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 83 YFIGGLVMLWSPNVYVLLL-ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI-~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
.++++++++++++++.+++ .|++.|++.|...+...+++.++++ ++|++++++.+.+..+|..++ +.....+.+..
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~--~~l~~~l~~~~ 170 (455)
T TIGR00892 94 ASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTL--APLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHH--HHHHHHHHHHh
Confidence 9999999999999988865 4799999999877777888899996 789999999999999999998 44455556667
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 162 SWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|||+.|++.++++++..++.+++.+
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999887765554444444
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.96 E-value=4.7e-25 Score=239.59 Aligned_cols=175 Identities=21% Similarity=0.241 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchh-----HHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPT-----IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s-----~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
..+.++.++.++......+.+|.+.+++|. +.. ..|++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGV--TGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 344567788888888888999999999998 433 3589999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 004754 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (732)
Q Consensus 84 aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~W 163 (732)
+++.+++.+.++++.+++.|++.|++.+ ..+....++.+++|+++|++++++......+|.++++ .....+.+..+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~ 171 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP--LAGGLLADSYGL 171 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCH
Confidence 9999999899999999999999999865 4577788899999999999999999999999999984 444455556799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 164 RLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 164 r~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|+.|++.+++.++..++.+++++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 172 RPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999888777766666667765
No 52
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=6.5e-25 Score=241.18 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=133.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
.....++.++...........++.+.+++|. +..+.|++.+.+.+++.++.+++|+++||+|||+++..+.++.++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 3444455555555444445566667789999 89999999999999999999999999999999999999999998887
Q ss_pred HHHH---h-hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHH-HHHHHHHHHHHhhccch
Q 004754 88 LVML---W-SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGM-FLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 88 ll~a---~-a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~-aIg~l~~l~~~l~~~~~ 162 (732)
+++. . .++++.+++.|++.|++.+...+...+.+.+++|+++|++++++.+.+.++|. +++ +.....+.+..|
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g--~~~~~~l~~~~g 170 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG--SYYSSYAIPAFG 170 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcccccc
Confidence 7653 2 35788889999999999988888888899999999999999999999999997 466 333344455567
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccC
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
|+..++......++..++.+++.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 171 EMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCC
Confidence 6655554443333333333344443
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=2.6e-25 Score=232.55 Aligned_cols=346 Identities=25% Similarity=0.363 Sum_probs=275.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
.+.++.++..++.....+.+|.+.+++|. +..+.+++.++..++..++++++|+++||+|||+.+.++.++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 45567788888888999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004754 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i 169 (732)
+.+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++ .......+..+||+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~ 158 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGP--LLGGLLAESLGWRWLFLI 158 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999994 444555566689999999
Q ss_pred HHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhhhhhccccccccccc
Q 004754 170 LFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYIIGPANDLAADQD 249 (732)
Q Consensus 170 ~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (732)
.+++.++..++.. +++ +.
T Consensus 159 ~~~~~~~~~~~~~-~~~------------------------~~------------------------------------- 176 (352)
T cd06174 159 LAILGLLLALLLL-FLL------------------------RL------------------------------------- 176 (352)
T ss_pred HHHHHHHHHHHHH-HHH------------------------HH-------------------------------------
Confidence 8887777555432 222 00
Q ss_pred cchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCccccccccccccccCCCCCC
Q 004754 250 ISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHFGSMFSVGGNQPR 329 (732)
Q Consensus 250 ~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCCCcccccCCcccc
Q 004754 330 NEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGEPVGMGIGGGWQL 409 (732)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhhccCCCCcccCCC
Q 004754 410 AWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELLDQNPIGPAMIHP 489 (732)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~e~p~~~~~~~~ 489 (732)
T Consensus 177 -------------------------------------------------------------------------------- 176 (352)
T cd06174 177 -------------------------------------------------------------------------------- 176 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHH
Q 004754 490 SETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLML 569 (732)
Q Consensus 490 s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l 569 (732)
.+...+. .+......+....+.|.++++. ++.+. ........+..++.+
T Consensus 177 ------------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~ 225 (352)
T cd06174 177 ------------------LLLLALA----FFLLSFGYYGLLTYLPLYLQEV--------LGLSA-AEAGLLLSLFGLGGI 225 (352)
T ss_pred ------------------HHHHHHH----HHHHHhHHHHHHHHHHHHHHHh--------cCCCH-HHHHHHHHHHHHHHH
Confidence 0011111 1122223456677888888763 23444 344555667889999
Q ss_pred HHHHHHhhhhhcccchh-HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCc
Q 004754 570 PSIAVAMRLMDISGRRT-LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPT 648 (732)
Q Consensus 570 ~~~~i~g~l~d~~grr~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 648 (732)
++.++.+++.||+|||+ .+..+..+..++.+.+.... +.+...+..++...+.+ ...+....+..|..|+
T Consensus 226 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 296 (352)
T cd06174 226 LGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--------SLALLLVALLLLGFGLG-FAFPALLTLASELAPP 296 (352)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHHh-ccchhHHHHHHhhcCH
Confidence 99999999999999999 88888877777776665521 12222233333333333 3456667888999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Q 004754 649 RVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVF 701 (732)
Q Consensus 649 ~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~ 701 (732)
+.|++..|+.+....++..+++.+.+.+.+..+++..+.+.+++++++.++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 297 EARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999998888876654
No 54
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=9.1e-26 Score=240.60 Aligned_cols=174 Identities=26% Similarity=0.386 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHH-----HHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAM-----SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Si-----f~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
.+.+.+|+..++...+.+.+++..+.++.+.+++.+. ..++..+++++.|+++||+|||++++++.++.+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4678899999999999988886532245556554443 33334568899999999999999999999999999999
Q ss_pred HHhhhhHH--------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----
Q 004754 90 MLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL---- 157 (732)
Q Consensus 90 ~a~a~s~~--------~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l---- 157 (732)
+++++++. .+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.+++++.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99998875 478889999999999999999999999999999999999999999999999654433221
Q ss_pred --hccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 158 --MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 158 --~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
....+||+.|.+.+++.++.. +....+||+|
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~ 194 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETP 194 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHH-HHHHhcCCCh
Confidence 135689999988777665533 3344556654
No 55
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=8.5e-26 Score=238.08 Aligned_cols=174 Identities=30% Similarity=0.520 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~ 90 (732)
+++.++..+....+.+.+| .+.+++|. +..+.+++.+++.++..++++++|.++||+|||+++.++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 5677888888888999999 89999999 89999999999999999999999999999999999999999999997777
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.++++++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.+++ +.......+..+||+.|++.
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g--~~l~~~l~~~~~~~~~~~~~ 157 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILG--PLLGGFLISYFGWRWAFLIS 157 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHH--HHHHHHCCCHCHHCCHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcc--cchhhhhhhccccccccccc
Confidence 6778888999999999999999999999999999999999999999999999999999 55566666778999999999
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 004754 171 FIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~esp 189 (732)
++++++.+++..++++++|
T Consensus 158 ~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 158 AILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHCCC---S
T ss_pred cchhhhhhhhHhhhhhhcc
Confidence 9999887766556666543
No 56
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1.5e-24 Score=244.28 Aligned_cols=181 Identities=12% Similarity=0.034 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~-dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
+..+.+..++.++..+....++++.+.+.+ ++|+ +.++.+++.+++.+++.++.++.|++.||+|.|+++.++.+++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 356777788888888888899999999877 8999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--
Q 004754 84 FIGGLVMLWS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-- 156 (732)
Q Consensus 84 aIgsll~a~a-----~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~-- 156 (732)
++.+++++++ ++++.+++.|++.|++ |..++.....+++|+|+++||+++++....+++|..++++......
T Consensus 111 ~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 111 IIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999987 8999999999999998 7788999999999999999999999997777777776654332211
Q ss_pred -hh-------------ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 157 -LM-------------TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 157 -l~-------------~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+. ...+||.++++..++.++..++.++++++.
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 10 134689988888888877776666665553
No 57
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.95 E-value=3.6e-24 Score=233.19 Aligned_cols=172 Identities=21% Similarity=0.294 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh
Q 004754 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~ 92 (732)
+..++.........+++|.+.+++|. +..+.++..+++.++..+++++.|+++||+|||++++++.++.+++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~ 87 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL 87 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33444444455566789999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004754 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 93 a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
+++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|.++++ .......+..+||+.|++.++
T Consensus 88 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~--~i~~~l~~~~g~~~~~~~~~~ 165 (392)
T PRK10473 88 AETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAP--VLGHLIMLKFPWQSLFYTMAA 165 (392)
T ss_pred hCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCcChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988884 444444556799999999988
Q ss_pred HHHHHHHHHHhhccCC
Q 004754 173 PSLIYFVLTIFYLPES 188 (732)
Q Consensus 173 l~~i~~~l~~~~~~es 188 (732)
++++..++.++++||+
T Consensus 166 ~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 166 MGILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 8887777766777775
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.95 E-value=4.8e-24 Score=229.61 Aligned_cols=165 Identities=18% Similarity=0.324 Sum_probs=148.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004754 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (732)
Q Consensus 20 ~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~L 99 (732)
+......+.+|.+.+++|+ ++.+.+++.+++.++..++.+++|.++||+|||+++.++.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 3445667889999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 100 iI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++ .......+..+||+.|++.++++++..+
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 160 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAP--IIGGWLLVWFSWHAIFWVLALAAILAAA 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999994 4444555567999999998888887766
Q ss_pred HHHhhccCC
Q 004754 180 LTIFYLPES 188 (732)
Q Consensus 180 l~~~~~~es 188 (732)
+..+++||+
T Consensus 161 ~~~~~~~~~ 169 (377)
T PRK11102 161 LVFFFIPET 169 (377)
T ss_pred HHHHhCCcc
Confidence 666777765
No 59
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.95 E-value=1.6e-23 Score=232.00 Aligned_cols=180 Identities=19% Similarity=0.350 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aI 85 (732)
.+...+.+..++.........+.+|.+.++++. +..+.++..+++.++++++++++|.++||+|||++++.+.+++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~ 93 (413)
T PRK15403 16 FFPMALILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTL 93 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHH
Confidence 445555666777778888889999999999999 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004754 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 86 gsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~ 165 (732)
+++++.++++++.++++|+++|++.+...+...+++.|++|+++|++++++......+|.+++ +..+..+.+..+||+
T Consensus 94 ~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~lg~~l~~~~gw~~ 171 (413)
T PRK15403 94 ACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG--PLSGAALMHFVHWKV 171 (413)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhcCHHH
Confidence 999999999999999999999999987777788899999999999999999999999999999 444454556679999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCCc
Q 004754 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|++.+++.++.+++.++++||++
T Consensus 172 ~f~~~~~~~~i~~~~~~~~lp~~~ 195 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLLLAMPETV 195 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCc
Confidence 999999888877666566788764
No 60
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2.5e-23 Score=227.21 Aligned_cols=176 Identities=20% Similarity=0.272 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
++.+.+..++..+....+.+.+|.+.+++|. ++.+.|++.+++.+++.++++++|+++||+|||+++.++.++.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 3334434555556677778889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004754 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 88 ll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~ 167 (732)
+++.++++++.+++.|++.|++.+...+...+++.|++|+++++...+.......+|.+++ +.......+..+||+.|
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~g~~~~~ 163 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALA--PLLGAWLLNHFGWQAIF 163 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCChHHHH
Confidence 9999999999999999999999988888888999999999999999998888888888888 44445555667999999
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 004754 168 GVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~es 188 (732)
++.+++.++..++. ++++|+
T Consensus 164 ~~~~~~~~~~~~~~-~~~~~~ 183 (401)
T PRK11043 164 ATLFAITLLLILPT-LRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHH-HHcCCC
Confidence 99888877765543 444543
No 61
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.94 E-value=2.1e-23 Score=228.57 Aligned_cols=177 Identities=18% Similarity=0.217 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHH-HHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPML-IVSSVLYF 84 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~I-G~~Ig~~~~g~LsDrfGrR~vL-ligllL~a 84 (732)
.....++.++.+.....+.+.+|. +.+++|. +.++.|++.+...+ ++.++.+++++ +||+|||+.+ ..+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHH
Confidence 345555677777777777777664 7789999 89999999876655 55556655555 9999999875 45566666
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchh--hhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 85 Igsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~R--g~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
++.++++++++++.+++.+.+.|...+...+...+++.++.+++.| +..+++.+.+.++|.+++ +.....+.+..|
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g--~~i~~~l~~~~g 171 (393)
T PRK15011 94 LACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIG--PPLAYALAMGFS 171 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHh--hHHHHHHHHhcC
Confidence 7777788899999887776655555567778888888898876655 455678888999999999 555666666779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
||..|++.++++++..++.++++||.|
T Consensus 172 w~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 172 FTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 999999999888877776667788763
No 62
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=4.8e-23 Score=233.88 Aligned_cols=175 Identities=14% Similarity=0.140 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChHH-HHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSV 81 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-----GrR~v-Lligll 81 (732)
...+++..+.++......++.+|...++.|. +..++|.+ +.....+ ++.+++|.++||+ |||+. ++++.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 3345556667888888899999999999999 88899886 3344444 6889999999999 99885 667777
Q ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004754 82 LYFIGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 82 L~aIgsll~a~a---~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~ 158 (732)
+.+++..++++. .+++.+.+.+++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++ .......
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~--~l~~~l~ 167 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG--GLALWLA 167 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 777777777664 46888999999999999999999999999999999999999999999999999994 4444444
Q ss_pred c-cchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 159 T-APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 159 ~-~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+ ..|||.+|++.+++.++..+. .+++||++
T Consensus 168 ~~~~GWr~~f~i~a~l~ll~~l~-~~~~~e~~ 198 (491)
T PRK11010 168 DRYLGWQGMYWLMAALLIPCIIA-TLLAPEPT 198 (491)
T ss_pred hcccCHHHHHHHHHHHHHHHHHH-HHhcCCCc
Confidence 5 469999999999887776544 34577764
No 63
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=2.4e-23 Score=229.13 Aligned_cols=172 Identities=15% Similarity=0.188 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~ 90 (732)
.++.++.........+.+| ++.+++|+ +..+.|++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.
T Consensus 13 ~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 13 LASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3455555666666666554 67788999 99999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.+.++++.++++|++.|.+.+...++..++..|.+|+++|+++.++.....++|.++++.. ...... .+|+..|.+.
T Consensus 91 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l--~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 91 PLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPL--GTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHH-hccCcHHHHH
Confidence 9999999999999999988888888899999999999999999999999999999999544 444333 5899999988
Q ss_pred HHHHHHHHHHHHhhccCC
Q 004754 171 FIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~es 188 (732)
+++.++..++..+++|+.
T Consensus 168 ~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 887777655555556654
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=1.4e-22 Score=220.92 Aligned_cols=183 Identities=19% Similarity=0.249 Sum_probs=158.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.+..+.++.+...+..+......+.+|.+.+++|. ++.+.+++.+++.+++.++++++|.++||+|||+++.++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 345556666666667677777888889999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.+++.+++.++++++.+++.|++.|++.+...+....++.|++++++|++++++.+.+..+|..++ +.......+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~i~~~l~~~~g 160 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA--PLIGGLLTTLFG 160 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhccC
Confidence 999999999999999999999999999998888888899999999999999999999999999998 444455556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
||+.|++.++++++..++..+++||+|
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999988877766655566777764
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=1.3e-22 Score=223.82 Aligned_cols=171 Identities=18% Similarity=0.261 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~ 90 (732)
.++.++.......+.+.++ ++.+++|+ +..+.|++.+++.++..+..+++|+++||+|||+++.++.++.+++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3455555555555555554 57889999 99999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
.+.++++.+++.|++.|++.+...+...+++.|++|+++|++++++......+|..+++ .....+. ..+||+.|++.
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~--~l~g~l~-~~g~~~~f~~~ 170 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGA--LLGSWLL-QYDFRLVCATG 170 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHH-HhhHHHHHHHH
Confidence 99999999999999999999988899999999999999999999999999999999994 4444444 56999999998
Q ss_pred HHHHHHHHHHHHhhccC
Q 004754 171 FIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~e 187 (732)
++++++..++..+++||
T Consensus 171 ~~~~~~~~i~~~~~~~~ 187 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 88777665554555554
No 66
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=1.5e-22 Score=226.55 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=133.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
....++.+++.+++.++.+...++.+|.+++++|+ ++.+.|++.+.+.+++.+++++.|.++||+|||+++.++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 34455667777888899999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004754 84 FIGGLVM---LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 84 aIgsll~---a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l 153 (732)
+++++++ .++++++.++++|+++|++.|...+....++.|+.|+++|...+++.+.++++|..+++++..
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876 467899999999999999999999999999999988888877899999999999999965543
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.93 E-value=2.2e-22 Score=221.40 Aligned_cols=171 Identities=19% Similarity=0.217 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
...++.++..+....+...++.+.++++. +..+.+++.+.+.+++.+..+++|.++||+|||++++++.++.++++++
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 34566777676555556666777889998 8889999999999999999999999999999999999999999998888
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004754 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i 169 (732)
+.+.++. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++| |..+..+.+. .|+..+.+
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~G--p~lgG~l~~~-~~~~~~~i 158 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLG--TVLGGALADP-HAEAALAV 158 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH-HHHHHHHH
Confidence 8777664 7789999999999999999999999999999999999999999999999 4444444443 48877777
Q ss_pred HHHHHHHHHHHHHhhccCCc
Q 004754 170 LFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 170 ~~~l~~i~~~l~~~~~~esp 189 (732)
.+.+.++. .+..+++||+|
T Consensus 159 ~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 159 CALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHH-HHHHhcCCCCc
Confidence 66554433 34456778764
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=2e-22 Score=223.77 Aligned_cols=171 Identities=16% Similarity=0.114 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
++++++..++.|+.....++.+|.+++++|+ +..+.|++.+.+.+++.+++++.|++.||+|||+++.+++++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4566677888889889999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred HHHHh---hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh------
Q 004754 88 LVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM------ 158 (732)
Q Consensus 88 ll~a~---a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~------ 158 (732)
+++.. .++++.+++.|++.|++.|...+....++.+..|+++|++.+++.+.+.++|..+++.........
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88654 358999999999999999999999999999999999999999999999999999996554443221
Q ss_pred ------------------ccchhHHHHHHHHHHHHHHHHH
Q 004754 159 ------------------TAPSWRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 159 ------------------~~~~Wr~~~~i~~~l~~i~~~l 180 (732)
+..+||++|.+.+++.++..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1246999999998877765543
No 69
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.7e-23 Score=228.98 Aligned_cols=383 Identities=20% Similarity=0.222 Sum_probs=291.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
....+++..+...+..+....++++.+.|.+++|+ |+.|.+++.++..+..++..++.|.+.||||.|++..++.++.
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 45566777777777777888899999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhh---HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 84 FIGGLVMLWSPN---VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (732)
Q Consensus 84 aIgsll~a~a~s---~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~ 160 (732)
.+.++..+++.+ ++++++.+++.|++ |..+.+...+++.|+|++++|.++++.. .+++|..+.++..... ...
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v--~~~ 165 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV--AVA 165 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH--HHH
Confidence 999999998754 45999999999997 5555888899999999999999999999 8999999986655443 334
Q ss_pred ch---hHHHHHHHHHHHHHHHHHHHhhccCCchhhhhccccHHHHHHHHHhhcCcChhhHHHHHHhhhccccccchhhhh
Q 004754 161 PS---WRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYI 237 (732)
Q Consensus 161 ~~---Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (732)
.+ ||.+..+..++.++..++.++++.|.|....+.+....
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------------------------------------- 208 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------------------------------------- 208 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-------------------------------------
Confidence 46 99999999998888888888888877632000000000
Q ss_pred hccccccccccccchhhhhhcccCCcCCcccccccccccccccccCCCCCcCCcchhccccccccCCCCCCCcccccccc
Q 004754 238 IGPANDLAADQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVTLFGSVHEKLPDQGSMRSTLFPHF 317 (732)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCCCcchhhhhhhccCCCCCCcCCCCCCCCCcCCcccccccccccccCCCCCCCCCcccccCccccCCCCC
Q 004754 318 GSMFSVGGNQPRNEEWDEESLVREGDEYPSDAAGGDSDDNLQSPLISRQTTSIEKDMVPPAHGTLSSMRHGSQVQGNAGE 397 (732)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCcccchhhhhhhhccCCcccCCcccccccccCCCCCCccceeeccccccchhhHHHHHHHHHHHhhhhhhhhh
Q 004754 398 PVGMGIGGGWQLAWKWSEKEGRDGKKEGGFKRIYLHQEGVPASHRGSLVSMHGEDVPVGGEVVQAAALVSQAALCSKELL 477 (732)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~s~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~ 477 (732)
T Consensus 209 -------------------------------------------------------------------------------- 208 (417)
T COG2223 209 -------------------------------------------------------------------------------- 208 (417)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCcccCCCCcccccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHH
Q 004754 478 DQNPIGPAMIHPSETAAKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASAS 557 (732)
Q Consensus 478 ~e~p~~~~~~~~s~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 557 (732)
..++.+++ ++-.+.+.+.++..+.++.++..++|.++++ ++|++...++
T Consensus 209 -------------------~~~~~v~~----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~--------~fg~~~~~Ag 257 (417)
T COG2223 209 -------------------AQLKAVFS----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT--------QFGLSPVTAG 257 (417)
T ss_pred -------------------hHHHHHhc----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCCChhhHH
Confidence 00111111 1112334445556677888999999999987 5778875544
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccch
Q 004754 558 LLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPI 637 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (732)
.+.....+.+.+.++++|+++||+|.++.++..+..+.++..++.+...... ........+...+....+.+++.+++
T Consensus 258 -~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~l~l~~~~G~GnGsv 335 (417)
T COG2223 258 -LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG-HGGSFVVFVAVFLALFVFAGLGNGSV 335 (417)
T ss_pred -HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc-cCcchHHHHHHHHHHHHHhccCcchh
Confidence 4455677888889999999999999999988888888777776665321111 01222333333444455555555554
Q ss_pred hhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHhc
Q 004754 638 PNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG-LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~i~~~~~~ 704 (732)
. -+++.++|. .-|...|+..+++.+|++.-|..++...+.+| +...|+++..+.+++.+..+...
T Consensus 336 f-k~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 336 F-KMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred e-eechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 444666665 57889999999999999999999999999998 88899999999998887766544
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.93 E-value=3e-23 Score=221.89 Aligned_cols=177 Identities=22% Similarity=0.159 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsl 88 (732)
+.+++.++.......+.+.+|. +.+++|+ +..+.+++.+++.++++++++++|.++||+|||++++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4556666667777788889995 9999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh--------c
Q 004754 89 VMLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--------T 159 (732)
Q Consensus 89 l~a~a~-s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~--------~ 159 (732)
++.+++ +++.+++.|++.|++.+. ++....++.|++|+++|++++++......+|..+++......... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 999999999999998654 566788999999999999999999977777777775443222211 1
Q ss_pred cchhHHHH-HHHHHHHHHHHHHHHhhccCCc
Q 004754 160 APSWRLML-GVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 160 ~~~Wr~~~-~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+||+.| .+.+++.++..++.+++.+|+|
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTP 192 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCC
Confidence 34899999 4446555555555556667665
No 71
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.5e-25 Score=247.00 Aligned_cols=185 Identities=20% Similarity=0.273 Sum_probs=171.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004754 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 1 ~r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligl 80 (732)
|++.++.++++++.++++.+|+.++..+++.+.+.||+ +++..|++.+.+.+++++.+|++|+++|||.||.++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni--~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI--SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC--CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH
Confidence 45667889999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (732)
Q Consensus 81 lL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~ 160 (732)
+++.++.++++++..||++.++|.+.|+|.+.+.++.+++++|.+|..+|++++++++++..+|..+|.+.... ....
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~--va~~ 183 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV--VASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee--eccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999544432 2222
Q ss_pred c-hhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 161 P-SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 161 ~-~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
. .|||.|.+.++++++..++++++++|.+
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 2 3999999999999999999999999864
No 72
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=3.1e-23 Score=234.29 Aligned_cols=153 Identities=24% Similarity=0.402 Sum_probs=139.3
Q ss_pred HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHh
Q 004754 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLARLLDGFGIG 111 (732)
Q Consensus 34 ~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~--s~~~LiI~R~L~G~g~G 111 (732)
.++++ +..+.|++.+.+++|+++++++.|+++||||.|+++.++.++.++++++..++. +++.+++.|+++|++.|
T Consensus 66 ~~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 66 GEYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG 143 (466)
T ss_pred ceecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence 35666 889999999999999999999999999999999999999999999999999875 44677999999999999
Q ss_pred hHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 112 LAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 112 ~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..+|+...+..+|+|++||++..++...+..+|.+++ .+....+.+. .||+++|++.++++++..++.+++..|+|.
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~--mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT--MPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999 5555555555 899999999999999999887788888885
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.92 E-value=2.7e-22 Score=246.79 Aligned_cols=168 Identities=11% Similarity=0.078 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH---hhhhHHHH
Q 004754 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML---WSPNVYVL 99 (732)
Q Consensus 23 ~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a---~a~s~~~L 99 (732)
.....+.+.+..+++.+.+....+++.+++.++++++++++|.++||+|||++++++.++.+++.+++. +.++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 334445566777777744456689999999999999999999999999999999998877665555443 45789999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-------cchhHHHHHHHHH
Q 004754 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-------APSWRLMLGVLFI 172 (732)
Q Consensus 100 iI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~-------~~~Wr~~~~i~~~ 172 (732)
+++|++.|++.+...++..+++.|++|+++|++++++.+.+..+|.++++++........ ..+|++.+.+..+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999955543332210 1245555555444
Q ss_pred HHHHHHHHHHhhccCCch
Q 004754 173 PSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp~ 190 (732)
...+..++..+++||+|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HHHHHHHHHHhcCcCCCC
Confidence 444434444556777653
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=2e-21 Score=213.35 Aligned_cols=172 Identities=16% Similarity=0.126 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChH-HHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRP-MLIVSSVLYF 84 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-----GrR~-vLligllL~a 84 (732)
.+.-++.++.....+..++|.+.++.|+ +.+++|++..+... .+..+++|.++||+ |||+ ++.++.++.+
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~ 79 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLA 79 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHH
Confidence 3456788899999999999999999999 99999999777775 58999999999999 8775 7888888888
Q ss_pred HHHHHHHhh---hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 004754 85 IGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA- 160 (732)
Q Consensus 85 Igsll~a~a---~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~- 160 (732)
++..+..+. .+++.+++..++.+++.+...++..+++.|++|+++|++++++...+..+|.++++. ....+.+.
T Consensus 80 l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~--l~~~l~~~~ 157 (402)
T PRK11902 80 ASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGG--LALWLADRV 157 (402)
T ss_pred HHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhH--HHHHHHhcc
Confidence 887777776 357778888888898899999999999999999999999999999999999999944 33444443
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
.|||..|++.+++.++..+ ..+++||++
T Consensus 158 ~gw~~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 158 LGWGNTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred cCHHHHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 4999999998887766444 345677753
No 75
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.92 E-value=3e-22 Score=215.25 Aligned_cols=150 Identities=19% Similarity=0.312 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004754 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (732)
Q Consensus 23 ~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~ 102 (732)
..+++++|.+.+++|+ +.++.|++.+++.+++.+++++.|+++||+|||+++.++.++.+++.+++ ..++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4567889999999999 99999999999999999999999999999999999999998888888877 77899999999
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 004754 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLI 176 (732)
Q Consensus 103 R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i 176 (732)
|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++............+||+.|.+.++++++
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999988888889999997 6899999999999999999985443322211112499999877665443
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=2.3e-21 Score=211.69 Aligned_cols=157 Identities=11% Similarity=-0.009 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH-HHHHHH-H
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV-LYFIGG-L 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligll-L~aIgs-l 88 (732)
+.+.++......+...|.+|.+.+++|. +..++|++.+++.+...++++++|.++||+|||......+. ..++.. .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 4566777777778888999999999999 99999999999999999999999999999998554322221 111222 2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 004754 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (732)
Q Consensus 89 l~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~ 168 (732)
++.++++++.+++.|++.|++.+...|...++..++ .++|+++.+......++|.+++ +.....+.+..|||..|.
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g--~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIG--SALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHH--HHHHHHHHHHcChhHHHH
Confidence 444678999999999999999888888888887765 4788999999999999999999 555566667789999998
Q ss_pred HHHHH
Q 004754 169 VLFIP 173 (732)
Q Consensus 169 i~~~l 173 (732)
+.++.
T Consensus 163 ~~~~~ 167 (382)
T TIGR00902 163 ILTAG 167 (382)
T ss_pred HHHHH
Confidence 87655
No 77
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=8e-23 Score=232.16 Aligned_cols=184 Identities=17% Similarity=0.173 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~-~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
++++..+++.++....+...++.+ +..+.+|.++ ...+.+.+.++|+++|+++.+++|.+.||++..+.+....+++
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 566777778888888887777654 3446788888 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh----hc
Q 004754 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----MT 159 (732)
Q Consensus 84 aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l----~~ 159 (732)
++..++..+..|++.+++.|++.|+..+..+|....+++.|+.+++||+.++++.+..++|.++|.++..+... ..
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 99998888899999999999999999999999999999999999999999999999999999999888777543 23
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhccCCch
Q 004754 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
..||||+|++.++++++..++.++++|+.|.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 4699999999999999999999999999985
No 78
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=4.1e-21 Score=213.57 Aligned_cols=175 Identities=10% Similarity=0.137 Sum_probs=118.7
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004754 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
...+.+.++++.|.+... .-+.+. ........+..+..+++.++.++++||+|||++++.+..+..+++.++....
T Consensus 227 ~~~~~~~~~~~~g~~~~~-~~~~~~-~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~-- 302 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEF-ADSFVV-KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD-- 302 (418)
T ss_pred HHHhHHHHHHHhcccccc-cchhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC--
Confidence 345667777765543200 001112 2334444566788888999999999999999999888887766655444310
Q ss_pred hcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHH-HHHHHHHHHHHhHHHHHHHhh------c
Q 004754 609 KMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICA-LVFWIGDIIVTYSLPVLLNSV------G 681 (732)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~-~~~~ig~~i~~~~~~~l~~~~------g 681 (732)
......+..++..++.+.+++. ..+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|++.+.. |
T Consensus 303 --~~~~~~~~l~l~~~l~g~~~~~-~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~ 379 (418)
T TIGR00889 303 --PEYFGYALLFLSMIVYGCAFDF-FNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFD 379 (418)
T ss_pred --cchhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCc
Confidence 0000011122223333333332 23444567899999999999999997 567899999999999999984 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004754 682 LAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 682 ~~~~f~~~~~~~~i~~i~~~~~~~et~~~ 710 (732)
|+.+|.+.+++++++.++.+++++|+++.
T Consensus 380 ~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 380 WQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 88899999999888888888889988654
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=3.3e-21 Score=212.62 Aligned_cols=140 Identities=10% Similarity=0.084 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccch
Q 004754 558 LLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPI 637 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (732)
..+..+..+...++.++++++.||+|||+.+..+..+..++.+++.+. + +.+..+...++....+.. ..+.
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-----~---~~~~~~~~~~l~g~~~~~-~~~~ 335 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-----T---GPLEVSILKLLHAFEVPF-LLVG 335 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----c---cHHHHHHHHHHHHHHHHH-HHHH
Confidence 344455677788999999999999999998887777666665554431 1 112222222222222221 1223
Q ss_pred hhhhhccCCCccchhhHHHH-HHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccC
Q 004754 638 PNILCSEIFPTRVRGICIAI-CALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi-~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~e 706 (732)
...+..|.+|++.++++.+. .+....+|.++++.+.|++.+..||+.+|.+.+++.++..++.++.+++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34667888999999988766 5777899999999999999999999999999998888777666665544
No 80
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.5e-22 Score=231.09 Aligned_cols=182 Identities=18% Similarity=0.156 Sum_probs=162.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+.|.|++..++.++...-....++.+.+.+.++++. +.++.+|+.++....+.+.+++.+.+.||||.|++.++|.++
T Consensus 43 ~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~--s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v 120 (509)
T KOG2504|consen 43 WGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS--SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLV 120 (509)
T ss_pred eeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC--CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHH
Confidence 357788888888777666667778889999999998 888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHH-HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 83 YFIGGLVMLWSPNVYVLLLA-RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~-R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
.+++.++..|+++++++++. -++.|+|.|+.+.....++..||+ ++|++++++...+.++|.++- +.+.-.+.+..
T Consensus 121 ~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~--~~l~~~l~~~~ 197 (509)
T KOG2504|consen 121 AALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVF--PPLLKYLLSKY 197 (509)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeH--HHHHHHHHHHh
Confidence 99999999999999988888 789999999999999999998887 679999999999999999998 66667778888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 162 SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
|||+.+++.+.+.+-.++....+.|.+|
T Consensus 198 G~r~~~l~~~~~~l~~~~~~~~~rp~~~ 225 (509)
T KOG2504|consen 198 GWRGALLIFGGISLNVLVAGALLRPLSP 225 (509)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 9999999999998887777777777654
No 81
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=5.5e-21 Score=221.06 Aligned_cols=196 Identities=14% Similarity=0.128 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
++|.++++..+...+.+.. ..++.+.|.+++++|+ +..+.+++.++. ..+.++++++|++.||+|+|++++++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgl--s~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNL--TQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc--CHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5676666666666655554 3456778899999999 899999998874 44567788899999999999999999999
Q ss_pred HHHHHHHHHhh------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 83 YFIGGLVMLWS------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 83 ~aIgsll~a~a------~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
++++.++++++ ++++.+++.|++.|++.+...+.....+.+||| ++||++.++...+.++|.++...+.....
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 689999999999999999999999999999997 78999999999999999987533333322
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhccCC--chhhhhccccHHHHHHHH
Q 004754 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES--PRWLVSKGRMLEAKKVLQ 206 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es--p~~l~~~~~~~~~~~~~~ 206 (732)
. .+|+..|++.++++++..++.++++++. |+|...++|.++.++..+
T Consensus 180 --~-~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~ 228 (591)
T PTZ00207 180 --S-DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQR 228 (591)
T ss_pred --H-HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHH
Confidence 1 4789999999988888777766666544 344434444444444333
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.90 E-value=1.7e-20 Score=204.60 Aligned_cols=154 Identities=11% Similarity=0.014 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCCh----HHHHHHHHHHHHHHHHH
Q 004754 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR----PMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR----~vLligllL~aIgsll~ 90 (732)
++......+.+.+.+|.+.+++|. +..+.|++.+++.++..++++++|.++||+||| +.+.++.++. ....+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 555556667888889989999999 999999999999999999999999999999994 3332222221 22233
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~ 170 (732)
...++++.+++.|++.|++.+...+...+++.++ .++|+++.+....+.++|.+++ +..+..+.+..|||.+|++.
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~ig--p~lgg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIG--SALTGKLVSWFGEQAILWIL 164 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHH--HHHHHHHHHHcChhHHHHHH
Confidence 4468899999999999999998888888887776 3568899999999999999999 66667777778999999887
Q ss_pred HHHHHH
Q 004754 171 FIPSLI 176 (732)
Q Consensus 171 ~~l~~i 176 (732)
++..++
T Consensus 165 ~~~~~~ 170 (382)
T PRK11128 165 TAGVAS 170 (382)
T ss_pred HHHHHH
Confidence 764444
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.90 E-value=1.3e-20 Score=206.01 Aligned_cols=172 Identities=15% Similarity=0.113 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsl 88 (732)
.....+++.......+.+.+|. +.+++|. +..+.|++.+++.+++.++++++|+++||+|||++++.+++..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3344555566666666777664 5667899 999999999999999999999999999999999999887766655443
Q ss_pred HHH---hh-----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 89 VML---WS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (732)
Q Consensus 89 l~a---~a-----~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~ 160 (732)
... +. .....+++.|++.|++.+...+....+..+..+ +++...+......++|.++++.+ .....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~--~g~l~~- 158 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASI--AGILFS- 158 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHH--Hhhhhc-
Confidence 321 11 123345667888898888888888887777543 34566677778888888888544 333333
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 161 PSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+||++|++.++++++..++.++..||+
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4999999999888887665544444443
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.90 E-value=6.1e-21 Score=235.78 Aligned_cols=178 Identities=11% Similarity=0.116 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHH---HHHH
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIV---SSVL 82 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLli---gllL 82 (732)
+++..+++.+.+++....+..++. .+..+.+.. .....++..+++.+.++++++++|.++||||||+++.. ..++
T Consensus 16 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~ 94 (1140)
T PRK06814 16 LFWTQFFGAFNDNFLKNALVILILYGLSGALGAY-NNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIG 94 (1140)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHhccccccc-hHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHH
Confidence 344455566666666555444433 344444331 23567889999999999999999999999999997533 2223
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
.++..+++.+.++++.++++|+++|++.+...|+..+++.+++|+++|++++++.+++..+|.++| +.++..+....+
T Consensus 95 ~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~ig--p~l~g~l~~~~~ 172 (1140)
T PRK06814 95 IAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLG--TIIGGLATISGN 172 (1140)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHH--HHHHHHHHhccc
Confidence 333333334458999999999999999999999999999999999999999999999999999999 555566666779
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|++.|++.++..++ ..+..+++|++
T Consensus 173 ~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 173 FVILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred cHHHHHHHHHHHHH-HHHHHhhCCCC
Confidence 99999554444444 33445566654
No 85
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=4.8e-21 Score=210.71 Aligned_cols=173 Identities=17% Similarity=0.283 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCC-hHHHHHHHHHHHHHH
Q 004754 14 GNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLYFIGG 87 (732)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr----fGr-R~vLligllL~aIgs 87 (732)
+.+..+.....+.. ..+++.+++|+ ++.+.|++.++..+..++..++.|.++|| +|| |+.++++..+.+++.
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVL 84 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHH
Confidence 33444444444444 45678888999 99999999999999999999999999998 687 456778888888888
Q ss_pred HHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hh
Q 004754 88 LVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LM 158 (732)
Q Consensus 88 ll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~f-P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~--l~ 158 (732)
+++.+.++ ...+++.+++.+++.+...+...++..|.. ++++|+++.++.+.+..+|..++........ ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~ 164 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG 164 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87777653 456677788889888887777788888887 5789999999999998898877654332222 11
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 159 ---TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 159 ---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+..+||+++.+.++++++..++.+++++|.
T Consensus 165 ~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~ 197 (437)
T TIGR00792 165 GGDDKFGWFMFALVLALIGVVSLIICFFGTKER 197 (437)
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 346899999999998888776666667664
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=3.1e-20 Score=199.39 Aligned_cols=161 Identities=17% Similarity=0.158 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-----CChHH-HHHHHHHHHHHHHHHHhh--
Q 004754 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSVLYFIGGLVMLWS-- 93 (732)
Q Consensus 22 ~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-----GrR~v-LligllL~aIgsll~a~a-- 93 (732)
...+++++|.+.+++|+ +.++.|++.++ .+...+ .+++|.++||+ |||+. ++.+.++.+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred chhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 34567789999999999 89999999765 444454 89999999998 89887 456777777776777776
Q ss_pred -hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch--------hH
Q 004754 94 -PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS--------WR 164 (732)
Q Consensus 94 -~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~--------Wr 164 (732)
.+.+.+.+..++.+++.+...++..+++.|++|+++|+++.++.+.+..+|.++++.. ...+....+ ||
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l--~~~l~~~~g~~~~~~~~wr 157 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSL--ALVLASPEFANTGLITLWG 157 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHH--HHHHhhhcccccccccccH
Confidence 4566677778888998888899999999999999999999999999999999999444 444444556 99
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Q 004754 165 LMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 165 ~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+|++.+++.++..++.++..||+
T Consensus 158 ~~f~i~ai~~l~~~~~~~~~~~e~ 181 (356)
T TIGR00901 158 YIFFWTALLILPGLLVTLFLAKEP 181 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 999999887777554444456664
No 87
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.88 E-value=4.8e-19 Score=193.37 Aligned_cols=175 Identities=12% Similarity=-0.054 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHH--HHHHHHHHHHHHHhH-HHhhhhhCChHHHHHHHHHH-
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLI--VAMSLIGATCITTCS-GAIADWLGRRPMLIVSSVLY- 83 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll--~Sif~IG~~Ig~~~~-g~LsDrfGrR~vLligllL~- 83 (732)
.+.++..++.+|.......+.+|.+.++.|. +.+++|++ .+++.+...+.++++ ++..||+||||.+++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 5567778899999999999999999999999 99999997 466788888888888 44799999999876665332
Q ss_pred HHHHHHHH-h--hhh-HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004754 84 FIGGLVML-W--SPN-VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 84 aIgsll~a-~--a~s-~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~ 159 (732)
+++..... + ..+ ...++..-++.++..+...+..-++..|..++++++...+....+..+|.+++. .......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~--~~~~~l~~ 158 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGG--AGTLVLFG 158 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 22222222 2 222 334444556666777777788888899999999999999998888899999994 33444556
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 160 APSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 160 ~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
..+||..|++.+++.++..+..++..|
T Consensus 159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~ 185 (390)
T TIGR02718 159 KFGQRPAFLLVACVPLASLVCVLWLKD 185 (390)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 679999999999888776655433333
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.87 E-value=1.4e-20 Score=220.31 Aligned_cols=179 Identities=17% Similarity=0.206 Sum_probs=151.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIg 86 (732)
+++...+..+.....++.++.+++.+.++|++ +..+.|++.+.+.++++++.++.+++.||+|||+++.+++++++++
T Consensus 34 ~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg 111 (633)
T TIGR00805 34 FSLLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLG 111 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHH
Confidence 34555567788888889999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHhhHhH
Q 004754 87 GLVMLWSP---------------------------------------------------NVYVLLLARLLDGFGIGLAVT 115 (732)
Q Consensus 87 sll~a~a~---------------------------------------------------s~~~LiI~R~L~G~g~G~~~~ 115 (732)
++++++.+ .+..++++|+++|+|.+..++
T Consensus 112 ~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~ 191 (633)
T TIGR00805 112 SFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP 191 (633)
T ss_pred HHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh
Confidence 99988753 245778899999999999999
Q ss_pred HHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c-------------------chhHHHHHHHHHHHH
Q 004754 116 LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-A-------------------PSWRLMLGVLFIPSL 175 (732)
Q Consensus 116 ~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~-~-------------------~~Wr~~~~i~~~l~~ 175 (732)
...+++.|++|+++|++++++.+.+..+|.++|+++........ . .+|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999966554433211 0 137888988888887
Q ss_pred HHHHHHHhhccCC
Q 004754 176 IYFVLTIFYLPES 188 (732)
Q Consensus 176 i~~~l~~~~~~es 188 (732)
+..++ ++++|+.
T Consensus 272 l~~v~-l~~~p~~ 283 (633)
T TIGR00805 272 LTSIP-FFFFPKA 283 (633)
T ss_pred HHHHH-HHhCccc
Confidence 76654 4555543
No 89
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.87 E-value=1e-18 Score=197.94 Aligned_cols=165 Identities=10% Similarity=0.081 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHH--hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYI-KRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYF 84 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I-~~d--lgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr-fGrR~vLligllL~a 84 (732)
..+.+..++..+....+.+.+|.+ .++ +|+ +..+.|++.+.+.+++.++++++|+++|| +|||++++++.++.+
T Consensus 13 ~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~ 90 (475)
T TIGR00924 13 FTLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLM 90 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHH
Confidence 344456666666666666666654 555 888 89999999999999999999999999999 899999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch---hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 004754 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (732)
Q Consensus 85 Igsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~---Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~ 161 (732)
++.++.+++++++.++++|++.|++.|...+...+++++++|+++ |+.+.++.+.+.++|.+++ +.......+..
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig--~~l~g~l~~~~ 168 (475)
T TIGR00924 91 LGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS--PLLAGVIAENY 168 (475)
T ss_pred HHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH--HHHHHHHHHhc
Confidence 999999999889999999999999999999999999999998754 8889999999999999999 45555556667
Q ss_pred hhHHHHHHHHHHHHHH
Q 004754 162 SWRLMLGVLFIPSLIY 177 (732)
Q Consensus 162 ~Wr~~~~i~~~l~~i~ 177 (732)
+||+.|.+.++..++.
T Consensus 169 g~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 169 GYHVGFNLAAVGMVIG 184 (475)
T ss_pred ChHHHHHHHHHHHHHH
Confidence 9999999888655543
No 90
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.87 E-value=1.5e-18 Score=200.28 Aligned_cols=172 Identities=21% Similarity=0.318 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
..++......+.....+.++++|.+|+|- .....|+.+...++.+++.++.|+++|.||||.+++.+.++..+|++.
T Consensus 48 ~~~~~~~~~~~~~~~~a~~l~~I~~diG~---~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv 124 (599)
T PF06609_consen 48 AFSLAVIAAYFVLVLPASILPYINADIGG---SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIV 124 (599)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCC---CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHH
Confidence 34444444555556667788999999995 467789999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004754 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i 169 (732)
++-++|...++++..+.|+|.|.... ....++|..|.|.|+...++.....-+...++ +..........+|||.|++
T Consensus 125 ~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~--~~ia~~~~~~~~WRw~~~~ 201 (599)
T PF06609_consen 125 CATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWIS--PLIAQLFAAHSGWRWIFYI 201 (599)
T ss_pred hhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhccc--HHHHHHhccCCCcchHHHH
Confidence 99999999999999999999888764 45668999999999887776665544444344 2223333445699999999
Q ss_pred HHHHHHHHHHHH-HhhccC
Q 004754 170 LFIPSLIYFVLT-IFYLPE 187 (732)
Q Consensus 170 ~~~l~~i~~~l~-~~~~~e 187 (732)
.++...+.+++. +++.|.
T Consensus 202 ~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 202 FIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 988776655443 444553
No 91
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.86 E-value=4.6e-18 Score=195.08 Aligned_cols=163 Identities=20% Similarity=0.218 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
.++++.++..+...+...+++.+..++.- |+...+++.++..+...+.++++|.++||+.||++++.+-++.++..++
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~--S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~ 91 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTG--SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALL 91 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHH
Confidence 34556666667667777777777777765 8999999999999999999999999999999999999998877665544
Q ss_pred HHhh-----hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 004754 90 MLWS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 90 ~a~a-----~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr 164 (732)
.++. .+.+.+++.-++.|++.+...|+..+++.|..|+++...++++.+...++..++| |.+++.+....|-.
T Consensus 92 L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iG--PalgG~Lva~~G~~ 169 (524)
T PF05977_consen 92 LAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIG--PALGGILVAFFGAA 169 (524)
T ss_pred HHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhcc--chHHHHHHHHHHHH
Confidence 4332 4788999999999999999999999999999999999999999999999999999 55556555556777
Q ss_pred HHHHHHHHHHHH
Q 004754 165 LMLGVLFIPSLI 176 (732)
Q Consensus 165 ~~~~i~~~l~~i 176 (732)
++|++.++..++
T Consensus 170 ~~f~inalsfl~ 181 (524)
T PF05977_consen 170 AAFLINALSFLI 181 (524)
T ss_pred HHHHHHHHHHHH
Confidence 888877765444
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.86 E-value=2e-18 Score=196.56 Aligned_cols=173 Identities=13% Similarity=0.112 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIA-GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr-fGrR~vLligllL~aIg 86 (732)
..+++..+...+....+. .+..++.+++|+ +..+.+++.+.+.....+..+++|+++|| +|||++++++.++++++
T Consensus 17 ~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 17 FMIFFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 333444444444444333 345678889999 88899999999998888999999999999 99999999999999999
Q ss_pred HHHHHhhhhHHH-HHHHHHHHHHHHhhHhHHHHHHHHhcCCcc--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 004754 87 GLVMLWSPNVYV-LLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (732)
Q Consensus 87 sll~a~a~s~~~-LiI~R~L~G~g~G~~~~~~~alI~E~fP~~--~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~W 163 (732)
++++.++++... ++++|+++|++.|...+...+++.|++|++ +|+.+.++++.+.++|.+++ +.....+.+..||
T Consensus 95 ~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g--~~l~g~l~~~~gw 172 (489)
T PRK10207 95 YFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIS--LSLAPVIADKFGY 172 (489)
T ss_pred HHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHH--HHHHHHHHHhhCh
Confidence 999998876444 557899999999999999999999999877 45788999999999999999 5555666667799
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 004754 164 RLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 164 r~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|+.|++.++ +++..++.+++.+
T Consensus 173 ~~~F~i~~i-~~~~~~~~~~~~~ 194 (489)
T PRK10207 173 SVTYNLCGA-GLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHH-HHHHHHHHHHHcc
Confidence 999988655 4443444444443
No 93
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.85 E-value=6.3e-19 Score=197.70 Aligned_cols=163 Identities=12% Similarity=0.180 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCchhH-HHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 004754 21 DNATIAGAVLYIKREFHLETEPTI-EGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (732)
Q Consensus 21 ~~~~~~~~~~~I~~dlgl~~s~s~-igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~L 99 (732)
.+..++.+.|++.+++|+ +..+ .|.+.++++.+|+++.+++|+++||+|.|+++.++.+.+++.++++++++++..+
T Consensus 41 ~R~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L 118 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHM 118 (511)
T ss_pred hhchHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367778899999999999 8888 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH--HHHHHHH
Q 004754 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL--FIPSLIY 177 (732)
Q Consensus 100 iI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~--~~l~~i~ 177 (732)
.+.|++.|++.|+.+ +...++..|+|+++|++++++...+..+|.+++++.... +...|||+.+-.. .+.+.+.
T Consensus 119 ~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql---l~s~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 119 QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL---LVTLGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCchhHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999544433 3456999865433 3334444
Q ss_pred HHHHHhhccCCc
Q 004754 178 FVLTIFYLPESP 189 (732)
Q Consensus 178 ~~l~~~~~~esp 189 (732)
..+..+++|..+
T Consensus 195 a~~~a~~LP~~~ 206 (511)
T TIGR00806 195 SVFLALFLKRPK 206 (511)
T ss_pred HHHHHHhCCCCc
Confidence 455667888543
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.3e-17 Score=180.25 Aligned_cols=171 Identities=20% Similarity=0.162 Sum_probs=145.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aI 85 (732)
+..+++..-+++-|+......+.+|++++.|++ +..+.+++..+++.+|.+.+++.|++.+|+|+|+.+++|+.++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 344555666777888888889999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh----
Q 004754 86 GGLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM---- 158 (732)
Q Consensus 86 gsll~a---~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~---- 158 (732)
++.++. -..++..++++-|+.|.|.+........+++...+++.-...+++.|.+.++|.+++++......+.
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 999884 5578899999999999999999999999999999998889999999999999999996555444331
Q ss_pred -------------ccchhHHHHHHHHHHHHHHH
Q 004754 159 -------------TAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 159 -------------~~~~Wr~~~~i~~~l~~i~~ 178 (732)
....||++|...+...++..
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~ 203 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLA 203 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 11247777776666555533
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.83 E-value=4.3e-17 Score=185.96 Aligned_cols=162 Identities=14% Similarity=0.189 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr-fGrR~vLligllL~aIgsl 88 (732)
+++..++..+....+.. ...++.+++|+ +..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+
T Consensus 26 ~~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 26 IFSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 33444444444433444 34567789999 88888888888776666667899999999 5999999999999999999
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch--hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 004754 89 VMLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI--RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 89 l~a~a~-s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~--Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~ 165 (732)
++++++ +.+.+.++|++.|++.|...+...+++.|++|+++ |+.+.++++.+.++|.+++ +.....+.+..|||+
T Consensus 104 l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~g--p~i~g~l~~~~g~~~ 181 (500)
T PRK09584 104 LVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFS--MLATPWLAAKYGWSV 181 (500)
T ss_pred HHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHH--HHHHHHHHHhhCHHH
Confidence 888874 45667788999999999999999999999998643 4567888899999999999 455555566779999
Q ss_pred HHHHHHHHHHH
Q 004754 166 MLGVLFIPSLI 176 (732)
Q Consensus 166 ~~~i~~~l~~i 176 (732)
.|++.++..++
T Consensus 182 ~F~i~~i~~~i 192 (500)
T PRK09584 182 AFALSVVGMLI 192 (500)
T ss_pred HHHHHHHHHHH
Confidence 99987754444
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.83 E-value=3e-17 Score=177.20 Aligned_cols=163 Identities=21% Similarity=0.305 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~ 90 (732)
+.+..+----..+.++|+++.|.+++|+ |.+..|+++++..+...+.+++..++..|+|.++.+..++++.+++.++-
T Consensus 17 Ivlia~NLR~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3333333344567778899999999999 99999999999999999999999999999999999999999999999998
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGV 169 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~~i 169 (732)
... +.+.++..-.+.|.+.+...+..|.++-+.|| ++-+..++++....++|.++++... ..+... .+||..+.+
T Consensus 95 ~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~la--vpla~~~~gW~~aL~~ 170 (395)
T COG2807 95 SLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALA--VPLAQHSGGWRGALGF 170 (395)
T ss_pred hcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhh--hHHHHhhccHHHHHHH
Confidence 887 78889999999999999999999999999999 5579999999999999999994443 433333 489999999
Q ss_pred HHHHHHHHHH
Q 004754 170 LFIPSLIYFV 179 (732)
Q Consensus 170 ~~~l~~i~~~ 179 (732)
.+.++++.++
T Consensus 171 WAl~allAl~ 180 (395)
T COG2807 171 WALLALLALL 180 (395)
T ss_pred HHHHHHHHHH
Confidence 9999888654
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=8.3e-17 Score=182.66 Aligned_cols=170 Identities=13% Similarity=0.157 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCChHHHHHH-HHHHHHHHHHHHh
Q 004754 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRPMLIVS-SVLYFIGGLVMLW 92 (732)
Q Consensus 18 ~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsD----rfGrR~vLlig-llL~aIgsll~a~ 92 (732)
..+..+...+.++.+.+++|. +....+++..+..+...+.+++.|.++| |+|||+.++++ .+..+++.++..+
T Consensus 16 iq~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 16 VQFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 344455556667778899999 8999999999999999999999999999 59999988775 6666666677777
Q ss_pred hhhHH-----------------HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchh--hhhhhHHHHHHHHHHHHHHHHHH
Q 004754 93 SPNVY-----------------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 93 a~s~~-----------------~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~R--g~~~~l~~~~~~~G~aIg~l~~l 153 (732)
+++.. .++++-.+..++.....+...+++.|.+|+++| +.+.++.+.+.++|.++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~ 173 (477)
T TIGR01301 94 AADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGA 173 (477)
T ss_pred CchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66543 223333344558888888999999999998865 68999999999999999966554
Q ss_pred HHHhhcc-------------chhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 154 GMSLMTA-------------PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 154 ~~~l~~~-------------~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
....... .+.|+.|.+.+++.++..+++.+.++|.|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 174 YSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 3211111 26789999999888888888888899875
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.80 E-value=1.5e-16 Score=177.56 Aligned_cols=174 Identities=14% Similarity=0.185 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCC-hHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr----fGr-R~vLligllL~aI 85 (732)
.++.+..+.-...++. +..++.+.+|+ +....|++.++..+..++..|+.|.++|| +|| |+.++.+.+..++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i 92 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGV 92 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHH
Confidence 3444444443344433 45678889999 99999999999999999999999999999 787 4566677777777
Q ss_pred HHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHH--H
Q 004754 86 GGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGM--S 156 (732)
Q Consensus 86 gsll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~f-P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~--~ 156 (732)
+.++..+.|+ +..+++..++.+.+.........++..|+. ++++|++..++-..+..+|..+++...... .
T Consensus 93 ~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~ 172 (444)
T PRK09669 93 VCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDI 172 (444)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766555543 455566666777766666667778999988 568899999998888888888775433221 1
Q ss_pred hh---ccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004754 157 LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 157 l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
.. ...+|+..+.+.++++++...+.++..+|
T Consensus 173 ~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e 206 (444)
T PRK09669 173 LGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKE 206 (444)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 11 13589988888888777765554444444
No 99
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.79 E-value=2.4e-16 Score=177.82 Aligned_cols=178 Identities=11% Similarity=0.142 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCC-hHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGR-RPMLIVSSVL 82 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsD----rfGr-R~vLligllL 82 (732)
+.-.++.+..++..+.+... ..++.+.+|+ +...+|++..+..+.-++..|++|.++| |+|| |+.++++.+.
T Consensus 9 ~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~ 86 (473)
T PRK10429 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLA 86 (473)
T ss_pred HhhccchhHHhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHH
Confidence 34455666666666666554 4567778899 9999999999999999999999999999 6698 6677778777
Q ss_pred HHHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 83 YFIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 83 ~aIgsll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~f-P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
.+++.+++...++ +..+++.-++.+++.....+...+++.|.. ++++|.+..++-..+..+|..+.+......
T Consensus 87 ~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 87 NSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665544331 334555666778888888888889999998 689999999997777777755553222211
Q ss_pred H--hh---ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 156 S--LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 156 ~--l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
. .. ...+|+....+.+++.++...+.++..+|.
T Consensus 167 ~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 167 VNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceec
Confidence 1 11 123678777777776666555555545553
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.78 E-value=1e-16 Score=181.48 Aligned_cols=175 Identities=15% Similarity=0.093 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIVS 79 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG-----rR~vLlig 79 (732)
.++.+++..++.+|.. ..+.. ..+.+.+++|+ +.++++.+.++..+...+-.+ +|.++||++ ||+.++++
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~ 101 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLS 101 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHH
Confidence 3455666677888888 55444 45567778999 999999999999999988666 999999998 77777777
Q ss_pred HHHHH-HHHHHHHhhhhHHHHH-HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHH---HHHHHHHHHHHHH
Q 004754 80 SVLYF-IGGLVMLWSPNVYVLL-LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTG---CVGMFLAYCMVFG 154 (732)
Q Consensus 80 llL~a-Igsll~a~a~s~~~Li-I~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~---~~G~aIg~l~~l~ 154 (732)
.++.+ ++....+..++...+. +.+++.+++.+...++.-+++.|..+ +++....++.+..+ .+|.++++ ...
T Consensus 102 ~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~--~l~ 178 (468)
T TIGR00788 102 GLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS--LLG 178 (468)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH--HHH
Confidence 76663 4333333345544444 47899999999999999999999999 66655544444333 47888884 344
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 155 MSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 155 ~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+.+.+..+||..|++.+.+.++. .+..++++|.
T Consensus 179 G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 179 GPLLDKTLTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred HHHHHhcCcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 45556679999999998887776 3445677775
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=9.1e-15 Score=166.30 Aligned_cols=177 Identities=15% Similarity=0.138 Sum_probs=120.9
Q ss_pred hhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccch--hHHHhhHHHHHHHHHH
Q 004754 524 SGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRR--TLLLSTIPILITSLVV 601 (732)
Q Consensus 524 ~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr--~~~~~~~~~~~i~~~~ 601 (732)
-+.+++......+..+ .+|++..+ ...+..+..+..++|+++.+++.||+|.| ++++.++.+..+..+.
T Consensus 295 dg~~ti~~~~~i~a~~--------~lg~s~~~-l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~ 365 (477)
T PF11700_consen 295 DGVNTIISFAGIYATE--------VLGMSTTQ-LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLY 365 (477)
T ss_pred HHHHHHHHHHHHHHHH--------hcCcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH
Confidence 4677777777777764 45666654 44555667899999999999999999998 6666655554222222
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004754 602 LVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
-.+-.........+.+...+..++++.+. .+..+..-++.+|+.|++..+..+|+........++++|.++|.+.+..|
T Consensus 366 g~~G~~~~~~g~~~~~~f~~~a~~~G~~~-G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 366 GLFGFWPSFFGLKSPWEFWVLAVLIGLFM-GGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred HHHHhhhcccCcccHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 11100111111112233222333333322 34456667888999999999999999999999999999999999999987
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004754 682 -LAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 682 -~~~~f~~~~~~~~i~~i~~~~~~~et~~~~ 711 (732)
.+..++...++.+++.++. ..++..|++.
T Consensus 445 ~~r~g~~~l~~lf~~gl~ll-~~v~~~~g~~ 474 (477)
T PF11700_consen 445 SQRYGFLFLLVLFLIGLILL-FFVDVEKGRE 474 (477)
T ss_pred CchhHHHHHHHHHHHHHHHH-hhccchhhhh
Confidence 7778888888877776655 5677776653
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=5.7e-15 Score=164.47 Aligned_cols=171 Identities=19% Similarity=0.191 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-ChHHHHHHHHHHHHHHHHHHh
Q 004754 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG-rR~vLligllL~aIgsll~a~ 92 (732)
-+++.....+...|.++...++.|+ |..++|++.++..+..+++.+++|.++||++ +|+++.+..++.++..++...
T Consensus 10 ~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 10 MYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555667778888888999 9999999999999999999999999999987 577777777877777777777
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh--hccchhHHHHHHH
Q 004754 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL--MTAPSWRLMLGVL 170 (732)
Q Consensus 93 a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l--~~~~~Wr~~~~i~ 170 (732)
.++++.+++.-++..+......|..-++..+... +++.-.+-.-..+++|-+++.+....... .+..+....+++.
T Consensus 88 ~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~ 165 (400)
T PF03825_consen 88 SSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIA 165 (400)
T ss_pred hccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 8889988888888888888888888888888886 34555666677778888777443211111 1112223445555
Q ss_pred HHHHHHHHHHHHhhccCCc
Q 004754 171 FIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 171 ~~l~~i~~~l~~~~~~esp 189 (732)
++.+++.. ...+.+|+.|
T Consensus 166 ~~~~~ll~-~~~l~lp~~~ 183 (400)
T PF03825_consen 166 AILSLLLA-GFALFLPKTP 183 (400)
T ss_pred HHHHHHHH-HHHHhCCCCc
Confidence 55544433 2345577664
No 103
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.77 E-value=2.5e-18 Score=186.85 Aligned_cols=146 Identities=20% Similarity=0.249 Sum_probs=136.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~al 120 (732)
+.+++|++++...+...+..++.|.+.||+|+|..+++|++++..+++++++..+++.++++|.++|+|.+....+..++
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcch-hhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 121 ISETAPPEI-RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 121 I~E~fP~~~-Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
++|.+|.+. |+.++|+.-.+.++|..+| |+.+..+++..|.+..|+++++++++-..+.++.++.+
T Consensus 184 lAd~f~~d~er~~vmGialgfislG~lvg--PpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 184 LADVFPEDNERGSVMGIALGFISLGVLVG--PPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHHHcccchhhhHHHHHHHHHHhccceec--CCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 999999654 7999999999999999999 88888889999999999999999999888766666543
No 104
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.75 E-value=9.9e-17 Score=173.74 Aligned_cols=111 Identities=22% Similarity=0.225 Sum_probs=102.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~al 120 (732)
+..-.|.+.+.|.+...+.++.+|.++||+|||++++++++..++..++.+.+.|+..++++|++.|+..|.. .+..++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 4556899999999999999999999999999999999999999999999999999977777799999999887 778899
Q ss_pred HHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 121 I~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
++|.+++++|+++++...+.+++|.++||.+.
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIG 176 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIG 176 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhh
Confidence 99999999999999999999999999994443
No 105
>PRK09848 glucuronide transporter; Provisional
Probab=99.74 E-value=8.2e-15 Score=163.57 Aligned_cols=130 Identities=14% Similarity=0.207 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh----CChHHH-HHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL----GRRPML-IVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf----GrR~vL-ligllL~aI 85 (732)
.++.+..........+ ..+++.+.+|+ +..++|++.++..+..++..+++|+++||. |||+.+ +++.+...+
T Consensus 14 g~g~~~~~~~~~~~~~~l~~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~ 91 (448)
T PRK09848 14 SLGDVANNFAFAMGALFLLSYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMI 91 (448)
T ss_pred ccchHHhHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHH
Confidence 3455555555544443 34578888899 899999999999999999999999999996 777644 555555554
Q ss_pred HHHHHHhhh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHH
Q 004754 86 GGLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 86 gsll~a~a~-------s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP-~~~Rg~~~~l~~~~~~~ 143 (732)
.+++....+ ....+++.-++.+++.+...+...++..+..+ +++|....++-..+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 92 FSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 444432111 12334445567788888888777777777664 47788887776655444
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.73 E-value=1.6e-15 Score=168.47 Aligned_cols=159 Identities=21% Similarity=0.354 Sum_probs=124.7
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh----hhCChH-HHHHHHHHHHHHHHHHHhh-h------
Q 004754 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRP-MLIVSSVLYFIGGLVMLWS-P------ 94 (732)
Q Consensus 27 ~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsD----rfGrR~-vLligllL~aIgsll~a~a-~------ 94 (732)
...+++.+.+|+ ++...|++..+..+..++..|+.|.++| |+|||+ .++++.++.+++.+++... |
T Consensus 23 ~~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 456778888899 9999999999999999999999999999 899665 5567778888877777665 4
Q ss_pred -hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhc--c-chhHHHH
Q 004754 95 -NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LMT--A-PSWRLML 167 (732)
Q Consensus 95 -s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP-~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~--l~~--~-~~Wr~~~ 167 (732)
....+.+.-++..++.........++..|..+ +++|.+..+.-+.+..+|.++......... ... . .+|+++.
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 22345666777788888888888999999997 579999999999999998865433333222 121 1 2799999
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 004754 168 GVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~~~~e 187 (732)
.+.++++++..++.++..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 99999888877777777776
No 107
>PRK11462 putative transporter; Provisional
Probab=99.72 E-value=3.8e-14 Score=160.10 Aligned_cols=174 Identities=12% Similarity=0.147 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCCh-HHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRR-PMLIVSSVLYFI 85 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~-~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr----fGrR-~vLligllL~aI 85 (732)
.++.+..+.....++. ++.++.+.+|+ ++...|++..+.-+.-++..|+.|.++|| +||| +.++++.+..++
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI 92 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence 3444444554455544 45577888999 99999999999999999999999999996 7876 455667677777
Q ss_pred HHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH--
Q 004754 86 GGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-- 156 (732)
Q Consensus 86 gsll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP-~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~-- 156 (732)
+.+++-+.|. +..+.+.-++..++.........++..|..+ +++|++..++-..+..+|..++++......
T Consensus 93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666554442 3445556667788888888888889999987 899999999999999998877754432221
Q ss_pred hh---ccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004754 157 LM---TAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 157 l~---~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
.. ...+|+....+.+++.++...+.++..+|
T Consensus 173 ~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 173 IGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHhccee
Confidence 11 11368888777777766655444444444
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.71 E-value=1.8e-13 Score=156.21 Aligned_cols=156 Identities=18% Similarity=0.180 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhh
Q 004754 17 LQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSP 94 (732)
Q Consensus 17 ~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aIgsll~a~a~ 94 (732)
...+....+...+| ++.+++|+ +..+.+++.+.+.+...++.+++|+++||+ |||++++++.++.+++.+++....
T Consensus 20 ~e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~ 97 (493)
T PRK15462 20 WEYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASE 97 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 33333333333444 56777899 899999999999999999999999999999 999999999999999887766543
Q ss_pred -hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc--hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004754 95 -NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 95 -s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~--~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
+...+.++..+.+++.|...+...+++.|.+|++ +|..+.++...+.++|.+++ |.....+.+..||++.|.+.+
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~ia--p~l~g~L~~~~Gw~~~F~iaa 175 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIA--PIACGYAQEEYSWAMGFGLAA 175 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHH--HHHHHHHHhhhChHHHHHHHH
Confidence 2233444444555667777787889999999875 79999999999999999999 444555666779999998876
Q ss_pred HHHHH
Q 004754 172 IPSLI 176 (732)
Q Consensus 172 ~l~~i 176 (732)
+..++
T Consensus 176 igm~l 180 (493)
T PRK15462 176 VGMIA 180 (493)
T ss_pred HHHHH
Confidence 64433
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.64 E-value=2.5e-13 Score=151.25 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhccc
Q 004754 556 ASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFG 635 (732)
Q Consensus 556 ~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (732)
.......+..+...+...++.++++|+|.|+.++++..++.+=.++..+.. ..+.....-.+-+.-+.+...
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--------~~~~i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--------NPWVISLIKLLHALEFPLLLV 331 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----------SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--------chHHHHHHHHHHHHHHHHHHH
Confidence 344445567788888999999999999999999998888888877766631 223333333444444433332
Q ss_pred chhhhhhccCCCccchhhHHHHH-HHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 636 PIPNILCSEIFPTRVRGICIAIC-ALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 636 ~~~~~~~~e~~p~~~r~~~~gi~-~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
+. .-|+++.+|+|..++...+. +...++|.++.+.++|.+.|..|++.+|++++++.++..++..+.++..++
T Consensus 332 a~-fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 332 AA-FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HH-HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HH-HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 22 35779999999999999986 577899999999999999999999999999999988888887777765544
No 110
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.63 E-value=3.9e-14 Score=156.72 Aligned_cols=186 Identities=16% Similarity=0.186 Sum_probs=148.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligll 81 (732)
++||+++++.++-++.+++..-.+++.-.+....|+ +....-|+..+|.+.+....+++-|+.|++|-|..++++..
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 589999999999999999988888888888888888 45677789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh------hhHH--HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004754 82 LYFIGGLVMLWS------PNVY--VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 82 L~aIgsll~a~a------~s~~--~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l 153 (732)
+.++++.+-..+ +.++ ....+..+.+++.-..+........-||++++|..+.++-.++..+|.+++.+++.
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 999999987764 3344 66777888888887777777788899999999999999998888899998866655
Q ss_pred HHHhhc----cchhHH--HHHHHHHHHHHHHHHHHhhccCCch
Q 004754 154 GMSLMT----APSWRL--MLGVLFIPSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 154 ~~~l~~----~~~Wr~--~~~i~~~l~~i~~~l~~~~~~esp~ 190 (732)
...-.. ...|-. +|.....++.+.+++..++.++.|+
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~ 240 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPP 240 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 443322 345654 4555555555555666666666553
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.59 E-value=5e-12 Score=142.45 Aligned_cols=177 Identities=20% Similarity=0.295 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCC-hHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLY 83 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr----fGr-R~vLligllL~ 83 (732)
.-.++-+..+.........+. ++.+.+|+ ++...|.+..+.-+.-++.-|+.|.++|| +|| ||.++.+.+..
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 334455555555555544444 67788899 99999999999999999999999999995 785 56677788888
Q ss_pred HHHHHHHHhhhh------HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 84 FIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 84 aIgsll~a~a~s------~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP-~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
++.+.++-++++ ....++.-.+.+++.........++..|+.+ ++||.+..+.-+.+..+|.++.........
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887763 4556666788889998888888899999885 799999999999999999776644332222
Q ss_pred -hh-c---cchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 157 -LM-T---APSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 157 -l~-~---~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.. . ..||+.+-++.+++.++.+.+.++.++|.
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 21 1 34899998888888888777767666664
No 112
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=1.6e-12 Score=143.34 Aligned_cols=169 Identities=17% Similarity=0.181 Sum_probs=116.8
Q ss_pred hhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHH
Q 004754 524 SGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLV 603 (732)
Q Consensus 524 ~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~ 603 (732)
-|.+++......+-.. .+|+++ ..-+++.....+..++|+++.|++.||+|-|+++..++.++.+.++...
T Consensus 266 DGv~til~~~~~fg~~--------~~gls~-~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~ 336 (438)
T COG2270 266 DGVNTILAMGGVFGAA--------DLGLSS-TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI 336 (438)
T ss_pred hhHHHHHHHHHHHHHH--------HcCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH
Confidence 3677777777666653 355665 4566677778899999999999999999999888888777766665554
Q ss_pred HHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhch-
Q 004754 604 LSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGL- 682 (732)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~- 682 (732)
+... ...+....+..+.+..+..+..-.+..+++|++..+..+|+.++.++.+.+++|.+.+.+.+.+|-
T Consensus 337 ~~~~---------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~ 407 (438)
T COG2270 337 FLEG---------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSS 407 (438)
T ss_pred Hccc---------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcch
Confidence 4211 122222222333333345566678889999999999999999999999999999999999998874
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004754 683 AGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 683 ~~~f~~~~~~~~i~~i~~~~~~~et~~~~ 711 (732)
+..+..+.++.+++ ++.+..+|+.+.++
T Consensus 408 r~g~~~i~vll~iG-l~~L~~v~~~~~~~ 435 (438)
T COG2270 408 RAGVLSIIVLLLIG-LLLLLRVKVPGRRE 435 (438)
T ss_pred hhHHHHHHHHHHhh-HhhEEeecCCCCcc
Confidence 33333444444444 33444566554443
No 113
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.56 E-value=3.9e-13 Score=152.41 Aligned_cols=183 Identities=16% Similarity=0.177 Sum_probs=133.7
Q ss_pred HHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH---HHhhhhHH
Q 004754 22 NATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV---MLWSPNVY 97 (732)
Q Consensus 22 ~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll---~a~a~s~~ 97 (732)
...+...+|. +.+.+|. +....+++.+...++..++.+++|+++||+|||+++.++.++..++.+. ...+++..
T Consensus 266 ~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 266 YYMLLTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 3334445565 4467788 7777788888889999999999999999999999988887654443332 22344577
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHH
Q 004754 98 VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLI 176 (732)
Q Consensus 98 ~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i 176 (732)
.+++++++.|++.+........++.|.+|++.|+.++++......++..+++.. .....+. .+|+.++++..+++++
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i--~g~l~~~~~~~~~~~~~~~~~~~i 421 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTL--AAWLVESTQNLMMPAYYLMVVAVI 421 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCchHHHHHHHHHHHH
Confidence 788889999998888878888899999999999999987433344444555332 2222222 3578777777776666
Q ss_pred HHHHHHhhccCCchhhhhc-----cccHHHHHHHHHhh
Q 004754 177 YFVLTIFYLPESPRWLVSK-----GRMLEAKKVLQSLR 209 (732)
Q Consensus 177 ~~~l~~~~~~esp~~l~~~-----~~~~~~~~~~~~~~ 209 (732)
.++. .+++||||+|+.++ +|.+|+++.+++++
T Consensus 422 ~~~~-~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 422 GLIT-GVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHH-HHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 5544 56679999998865 89999999998887
No 114
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.7e-14 Score=151.18 Aligned_cols=144 Identities=14% Similarity=0.100 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSV 81 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr-fGrR~vLligll 81 (732)
++..++..+++-.+-..++...-+..-.+...+.++ +.++..++.+++..-..+.++++|++.|| +|.|..-++-+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 345666677777777777776655555677777777 77888999999999999999999999996 688877777667
Q ss_pred HHHHHHHHHH---hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 82 LYFIGGLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 82 L~aIgsll~a---~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
...++.++++ +.+.+|.+.++||+.|+|.-..-++-..+..-||..|+.+.++|+.....-+|..+-
T Consensus 119 fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvN 188 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVN 188 (459)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceee
Confidence 7777777665 578999999999999999888878888999999999999999999888888888776
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.54 E-value=3.4e-12 Score=137.21 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=99.8
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHH
Q 004754 519 ILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITS 598 (732)
Q Consensus 519 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~ 598 (732)
.+.......++..|.+.++.+.. .+|.++.+.+.. ...+..++++|++++++++||+|+|+++..+..+..++
T Consensus 149 ~f~yvg~e~~~~~w~~~yl~~~~------~~g~s~~~a~~~-~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 149 IFVYVGAEVSAGSFLVNFLSDPH------ALGLPEDQAAHF-TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc------cCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 33333345677889999997521 245666555555 55678899999999999999999998877766655555
Q ss_pred HHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 004754 599 LVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN 678 (732)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~ 678 (732)
.+++... +.....+.+++++++.+ ...|.......+.+|++ .+++.++. .+..+|+++.|.+.|.+.|
T Consensus 222 ~~l~~~~---------~~~~~~~~~~l~g~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 222 SIGAALT---------HGYVAMWFVLALGLFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHHc---------CCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 4333221 11122223333333332 33455556666777754 45667775 6778999999999999999
Q ss_pred hhchhHHHHHH
Q 004754 679 SVGLAGVFGMY 689 (732)
Q Consensus 679 ~~g~~~~f~~~ 689 (732)
..|.+.+|++.
T Consensus 290 ~~g~~~a~~v~ 300 (310)
T TIGR01272 290 CLGIQLAFALP 300 (310)
T ss_pred hccchHHHHHH
Confidence 99988777633
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.49 E-value=3.5e-13 Score=122.49 Aligned_cols=138 Identities=31% Similarity=0.498 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc
Q 004754 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE 128 (732)
Q Consensus 49 ~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~ 128 (732)
.+.+.++..++.+++|++.||+|||+.+..+..+..++.+++.+.++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 45567788999999999999999999999999999999988888899999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 129 IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 129 ~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
+|++.+++.+....+|..+++ .......+..+|++.+.+.++++++..++.+++.||+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGP--PLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhH--HhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999994 4445555677999999998888887776666666653
No 117
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.46 E-value=1e-12 Score=148.50 Aligned_cols=186 Identities=20% Similarity=0.284 Sum_probs=147.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCC-hHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLIVSSV 81 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGr-R~vLligll 81 (732)
..|..+.++.+..++.+.....+.+..-...++++.+.+.+..||+.++..++.+++++++|+...|.+. |+.++++.+
T Consensus 31 t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~i 110 (488)
T KOG2325|consen 31 TNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFL 110 (488)
T ss_pred CchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHH
Confidence 4677888888888898888887776554455555444488899999999999999999999999999995 777889999
Q ss_pred HHHHHHHHHH-h---hh-hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 82 LYFIGGLVML-W---SP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 82 L~aIgsll~a-~---a~-s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
++.++.++.. . .+ ..+.++++|++.|+|.|.. ...-+++++....+.|.++.+....+..+|.++|+.......
T Consensus 111 i~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 111 IAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 9999999883 3 23 5789999999999998777 778899999888889999999988888888888854444333
Q ss_pred hhccch-----------hHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 157 LMTAPS-----------WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 157 l~~~~~-----------Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
-....| +-..-++.++++++.+++.+++++|.+
T Consensus 190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~ 233 (488)
T KOG2325|consen 190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVY 233 (488)
T ss_pred hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecc
Confidence 222222 234567888888888888888888864
No 118
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.42 E-value=1.6e-11 Score=143.86 Aligned_cols=180 Identities=19% Similarity=0.250 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aI 85 (732)
..+.++++..+.+++..+.+...+..|.+.|++ +.++.|++.+.+-++..+...+..+..-|.-|-+++-+|++++++
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i--~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI--SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC--CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 345666777888888888888889999999999 888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhh--------------------h--------------------------------hHHHHHHHHHHHHHHHhhH
Q 004754 86 GGLVMLWS--------------------P--------------------------------NVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 86 gsll~a~a--------------------~--------------------------------s~~~LiI~R~L~G~g~G~~ 113 (732)
+++++++- + -+..++++.++.|+|....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 99998762 1 0236777799999999999
Q ss_pred hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh--cc-----------c----hhHHHHHHHHHHHHH
Q 004754 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--TA-----------P----SWRLMLGVLFIPSLI 176 (732)
Q Consensus 114 ~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~--~~-----------~----~Wr~~~~i~~~l~~i 176 (732)
++...+|+-|...+++-...+++..+...+|.++|.+......-. +. . .|..-|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999996665554321 11 1 355566666666666
Q ss_pred HHHHHHhhccCC
Q 004754 177 YFVLTIFYLPES 188 (732)
Q Consensus 177 ~~~l~~~~~~es 188 (732)
..+ .++++|..
T Consensus 335 ~a~-p~f~fPk~ 345 (735)
T KOG3626|consen 335 SAV-PLFFFPKE 345 (735)
T ss_pred HHH-HHHhCccc
Confidence 544 45666643
No 119
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=4.5e-11 Score=133.28 Aligned_cols=161 Identities=14% Similarity=0.147 Sum_probs=130.7
Q ss_pred HHHHHHHHHHhCCCC------chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh----h
Q 004754 26 AGAVLYIKREFHLET------EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP----N 95 (732)
Q Consensus 26 ~~~~~~I~~dlgl~~------s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~----s 95 (732)
....+...++.+.+. +.+..+.+.++..++.+++.++.|+++||+|+|+++.++.++.+++.++..... +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344455555666411 236779999999999999999999999999999999999999988876666532 3
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhcc------chhHHHHH
Q 004754 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTA------PSWRLMLG 168 (732)
Q Consensus 96 ~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~------~~Wr~~~~ 168 (732)
++.+++.+++.|++.+...+....++.|++|+++|+++.++.+ ...++|.++++... ..+.+. .||+.+|.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~--G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS--GVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH--HHHHHHhccccCCchHHHHH
Confidence 4667788999999999999999999999999999999999997 67889999995444 443333 47999999
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 004754 169 VLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 169 i~~~l~~i~~~l~~~~~~es 188 (732)
+.++++++..++.+++++|+
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCc
Confidence 99998888888888888887
No 120
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.35 E-value=2.9e-11 Score=133.71 Aligned_cols=147 Identities=13% Similarity=0.175 Sum_probs=125.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~al 120 (732)
+..+.|++.++..++..++.+++|+++||+|+|+.+.++.++.+++.++..++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999999999999999999999999999999988888889999999999999999998888888899
Q ss_pred HHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 121 I~E~fP~~~Rg~~~~l-~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+.+.+|++.|+...+. .++...+|.+++ +.....+.+..|||.+|.+.+++.++..++.++.+++.|
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig--~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFL--STLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHH--HHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999887655 567788999999 444566667779999999988888776666666666543
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.35 E-value=1e-10 Score=139.62 Aligned_cols=160 Identities=18% Similarity=0.124 Sum_probs=112.1
Q ss_pred HHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHH
Q 004754 528 GVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~ 607 (732)
.+...+|.+..+. |++....+. +..+..++.+++.++.|+++||+|||+.++.+.++..++.++..+..
T Consensus 185 ~is~ilp~i~~~~---------gls~~~~g~-l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~- 253 (742)
T TIGR01299 185 VVGFVLPSAEKDL---------CIPDSGKGM-LGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ- 253 (742)
T ss_pred HHHHHHHHHHHHh---------CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh-
Confidence 3455566665554 455544444 45567899999999999999999999999888877776666554421
Q ss_pred hhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------
Q 004754 608 IKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV------- 680 (732)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~------- 680 (732)
..+..++.-++.+++.+ +..+...+++.|.+|++.|+...++..++..+|.++++.+...+....
T Consensus 254 -------s~~~llv~R~l~G~g~g-~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g 325 (742)
T TIGR01299 254 -------GYGFFLFCRLLSGFGIG-GAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMG 325 (742)
T ss_pred -------hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccc
Confidence 12222333333333333 234677889999999999999999999999999999998877766543
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHhccCC
Q 004754 681 ------GLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 681 ------g~~~~f~~~~~~~~i~~i~~~~~~~et 707 (732)
+|++.+++.++.++++ ++..+++||+
T Consensus 326 ~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPES 357 (742)
T TIGR01299 326 SAYQFHSWRVFVIVCAFPCVFA-IGALTFMPES 357 (742)
T ss_pred cccccccHHHHHHHHHHHHHHH-HHHHHHcCCC
Confidence 4677776666555554 4556678988
No 122
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.34 E-value=8.9e-14 Score=160.42 Aligned_cols=145 Identities=20% Similarity=0.221 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsl 88 (732)
+.+++..+++...++.+...+..|.+.|++ +.++.|++.+.+-++..+..++..++..|.-|-+.+-+|.++++++++
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~ 83 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSL 83 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHH
Confidence 344555666677788888889999999999 999999999999999999999999999998788889999999999988
Q ss_pred HHHhhh--------------------------------------------------hHHHHHHHHHHHHHHHhhHhHHHH
Q 004754 89 VMLWSP--------------------------------------------------NVYVLLLARLLDGFGIGLAVTLVP 118 (732)
Q Consensus 89 l~a~a~--------------------------------------------------s~~~LiI~R~L~G~g~G~~~~~~~ 118 (732)
++++-+ -++.++++.++.|+|....++...
T Consensus 84 l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 84 LFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred HHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 876510 136788889999999999999999
Q ss_pred HHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 119 IYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 119 alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
+|+-|..++++-+...|+......+|.++|.+.....
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFC 200 (539)
T ss_dssp -------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHHH
Confidence 9999999999999999999999999999996665433
No 123
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.34 E-value=1.3e-09 Score=122.75 Aligned_cols=148 Identities=21% Similarity=0.208 Sum_probs=123.8
Q ss_pred HHHHHHHHhC----CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhh--hHHHHH
Q 004754 28 AVLYIKREFH----LETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSP--NVYVLL 100 (732)
Q Consensus 28 ~~~~I~~dlg----l~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aIgsll~a~a~--s~~~Li 100 (732)
..-|+..+++ + +.++..-+.+.|..-.-+..+++|+++||+ |+|+++++|.++.++|.++.+.+. +...+.
T Consensus 44 L~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~ 121 (498)
T COG3104 44 LILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLY 121 (498)
T ss_pred HHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHH
Confidence 3456777777 8 777776677777777778899999999996 999999999999999999999884 788899
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCc--chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLAVTLVPIYISETAPP--EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 101 I~R~L~G~g~G~~~~~~~alI~E~fP~--~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
++-++.++|.|..=+...++++|.+|+ .+|-..++++.++.++|..++ |..........||...|...++-..+.+
T Consensus 122 i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~--p~i~~~~~~~~g~~~gF~~aavGm~~gl 199 (498)
T COG3104 122 IGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA--PIITGLLAINYGWHVGFGLAAVGMIIGL 199 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH--HHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999974 346778888899999999999 5555666778899999988877655544
Q ss_pred H
Q 004754 179 V 179 (732)
Q Consensus 179 ~ 179 (732)
+
T Consensus 200 ~ 200 (498)
T COG3104 200 V 200 (498)
T ss_pred H
Confidence 3
No 124
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=9.2e-11 Score=122.79 Aligned_cols=165 Identities=27% Similarity=0.380 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChH-HHHHHHHHHHHHHHH
Q 004754 12 AIGNLLQGWDNATIAGAVLYIKREF-HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRP-MLIVSSVLYFIGGLV 89 (732)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~I~~dl-gl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~-vLligllL~aIgsll 89 (732)
.+..++.......+....|.+.++. |. +..+.+++.+...++..++.++++++.||+|||+ .+.++.++..++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 258 (352)
T cd06174 181 ALAFFLLSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLL 258 (352)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3344444555555556666666654 88 8899999999999999999999999999999999 999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHH
Q 004754 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (732)
Q Consensus 90 ~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i 169 (732)
..+.++.+.+.+..++.|++.+...+...+++.|..|+++|++.+++.+....+|..++ +.......+..+|+..+.+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~i~g~l~~~~~~~~~~~~ 336 (352)
T cd06174 259 LALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALG--PLLAGLLLDTGGYGGVFLI 336 (352)
T ss_pred HHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcccCcchHHHH
Confidence 99988899999999999999999999999999999999999999999999999999999 5555666667799999999
Q ss_pred HHHHHHHHHHH
Q 004754 170 LFIPSLIYFVL 180 (732)
Q Consensus 170 ~~~l~~i~~~l 180 (732)
.++++++..++
T Consensus 337 ~~~~~~i~~i~ 347 (352)
T cd06174 337 LAALALLAALL 347 (352)
T ss_pred HHHHHHHHHHH
Confidence 99988876654
No 125
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=6.3e-11 Score=125.80 Aligned_cols=151 Identities=18% Similarity=0.132 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHH
Q 004754 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNV--YVLL 100 (732)
Q Consensus 23 ~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~--~~Li 100 (732)
..+....+.+.++++. +..+.+++.+++.++..++++++|+++||+|||+.+.++.++.+++.++..+.++. ..++
T Consensus 222 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T TIGR00890 222 LLLIGLYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFL 299 (377)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHH
Confidence 3334445556778888 78889999999999999999999999999999999999998888888877766643 3345
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (732)
Q Consensus 101 I~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~ 177 (732)
+..++.|++.+...+..+.++.|.+|+++|+++.++.+....+|.+++ +.......+..||++.|.+.++++++.
T Consensus 300 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~--~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 300 ATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFG--GLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH--HHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 667888999888888888999999999999999999999999999999 444555566779999998888776653
No 126
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.31 E-value=1.2e-10 Score=125.15 Aligned_cols=169 Identities=18% Similarity=0.150 Sum_probs=122.5
Q ss_pred hhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHH
Q 004754 523 LSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVL 602 (732)
Q Consensus 523 ~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~ 602 (732)
..+........|.+.++. |.+..+ ..+...+..++.+++.++.|++.||+|||+.+..+..+..++.+.+
T Consensus 18 ~~~~~~~~~~~p~~~~~~---------g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 18 PLGIDMYLPAFPEIAADL---------STPASI-VQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHhcccHHHHHHHh---------CCCHHH-HHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 334444455566666654 445544 4455567789999999999999999999999998887777776665
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhch
Q 004754 603 VLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGL 682 (732)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~ 682 (732)
.... +.+...+..++.+.+.+ ...+....+..|.+|++.|+++.++.+....+|..+++.+.+.+.+..||
T Consensus 88 ~~~~--------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 158 (385)
T TIGR00710 88 ALSN--------NIETLLVLRFVQAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSW 158 (385)
T ss_pred HHHc--------cHHHHHHHHHHHHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 5421 11122222222222222 22344567789999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004754 683 AGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 683 ~~~f~~~~~~~~i~~i~~~~~~~et~~~ 710 (732)
+..|++.++++++..++.++..||++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 159 HAIFAFLSLAGILLSALIFFILPETLPY 186 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999888888877777777877543
No 127
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=1.2e-10 Score=129.95 Aligned_cols=181 Identities=14% Similarity=0.098 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 004754 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTL 587 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~ 587 (732)
++..+...++..+..+.....+..+.|.+.++.| ++..+. .++..+..++..++.++.|+++||+|||++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~s~~~~-g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~ 90 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLG---------LSRSDI-GLLATLFYITYGVSKFVSGIVSDRSNARYF 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcC---------CCHHHH-HHHHHHHHHHHHHHHhhhhHHHhhcCCchh
Confidence 4444444444444444444456778888887654 444444 444556889999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 004754 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDI 667 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~ 667 (732)
+..+..+..++.+++.+.. ..+..++..++...+.+.. .+....++.|.+|++.|+++.++.+....+|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~g~~~g~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~ 161 (434)
T PRK11663 91 MGIGLIATGIINILFGFSS--------SLWAFALLWVLNAFFQGWG-WPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA 161 (434)
T ss_pred HHHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHHcc-chHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9888888777776655421 1112222222223333322 345567789999999999999999999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004754 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et 707 (732)
+++.+.+++.+..||++.|++.++++++..++..+.++|+
T Consensus 162 ~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 162 LIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999988887776655555566664
No 128
>TIGR00895 2A0115 benzoate transport.
Probab=99.30 E-value=4.1e-11 Score=128.40 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=120.9
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004754 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
......++.|.+.++.| .+..+. .++..+..++.+++.++.|+++||+|||+.+..+..+..++.+++.+
T Consensus 32 ~~~~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 101 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWG---------LDPVQL-GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCAL 101 (398)
T ss_pred HHHHHHhhHHHHhhccC---------CCHHHH-HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777777644 444444 44455677889999999999999999999998888777776665544
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004754 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
.. +.+..++..++.+++.+ ...+....+..|.+|++.|+++.++......+|.++++.+.+++.+..||+.
T Consensus 102 ~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~ 172 (398)
T TIGR00895 102 AT--------NVTQLLILRFLAGLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRS 172 (398)
T ss_pred cc--------chHHHHHHHHHHhcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccccee
Confidence 20 11222222222222222 2345566788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC
Q 004754 685 VFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.|++.++++++..++.+..+||+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCC
Confidence 999887777777777777788764
No 129
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.28 E-value=4.7e-10 Score=123.35 Aligned_cols=155 Identities=19% Similarity=0.194 Sum_probs=123.4
Q ss_pred HHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004754 27 GAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (732)
Q Consensus 27 ~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L 105 (732)
..+| ++.+++|+ +..+.+++.+...++..++.+++|+++||+|||+.+..+.+...+......+.++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3445 56677898 88889998888888888899999999999999998887776666655555566778888889999
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 004754 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (732)
Q Consensus 106 ~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~ 185 (732)
.+++.|...+....+..|.+|. +||.++++.+....+|.++++ .......+..+|+.+|++.++++++.+++ .+++
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~--~l~G~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~ 390 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAG--SLAGIVAEIWNYHAVFWFALVMIIATLFC-LLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHH--HHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHhh
Confidence 9998888888888888999985 599999999999999999994 44455566679999999888877775544 4455
Q ss_pred cC
Q 004754 186 PE 187 (732)
Q Consensus 186 ~e 187 (732)
||
T Consensus 391 ~~ 392 (393)
T PRK15011 391 KD 392 (393)
T ss_pred cC
Confidence 54
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.28 E-value=4.3e-10 Score=122.89 Aligned_cols=158 Identities=16% Similarity=0.174 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~ 104 (732)
....++.+.++.+. + ..++..+.+.++..++.++.|++.||+|+|+.+.++.++.+++.++..+.++.+.+++.++
T Consensus 235 ~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--D--GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--c--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 33344444455565 2 3466677888899999999999999999999999998888888888888888888888999
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004754 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 105 L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
+.|++.+..++.....+.|.+|+++||++.++.+....+|..+++ .......+..||++.|.+.++++++.+++.++.
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~--~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITG--PLAGLVASWFGYPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888888889999999999999999999999998884 344555666799999999888888766655544
Q ss_pred ccCC
Q 004754 185 LPES 188 (732)
Q Consensus 185 ~~es 188 (732)
.++.
T Consensus 389 ~~~~ 392 (399)
T PRK05122 389 YRRA 392 (399)
T ss_pred cccc
Confidence 4433
No 131
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.27 E-value=2.4e-10 Score=124.84 Aligned_cols=182 Identities=13% Similarity=0.120 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004754 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
|.+.+......++..+.......+|.+.++.|.+ .. ...+...+..++.+++.++.|+++||+|||+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s---------~~-~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~ 72 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNAS---------EA-QLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAI 72 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCC---------HH-HHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHH
Confidence 4455666666667767777778888888876544 43 3444556678888999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 004754 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIV 669 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~ 669 (732)
.+..+..++.+.+.... +.+..++..++.+.+.+ ...+..+.++.|.+|++.|+.+.++.+....++.+++
T Consensus 73 ~~~~~~~i~~~~~~~~~--------~~~~~~~~~~l~g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~ 143 (392)
T PRK10473 73 PGAALFIIASLLCSLAE--------TSSLFLAGRFLQGIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLA 143 (392)
T ss_pred HHHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777666554421 11122222222222222 2234556788999999999999999999999999999
Q ss_pred HhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004754 670 TYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 670 ~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~ 710 (732)
|.+.+.+.+..||+..|++.++++++..++.+..+||++..
T Consensus 144 ~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 144 PVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999988889999999999988888887777778887543
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.27 E-value=3.5e-10 Score=123.70 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=116.7
Q ss_pred HhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhc
Q 004754 531 YYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKM 610 (732)
Q Consensus 531 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~ 610 (732)
..+|.+.++ +|.+..+.+.. ...+.++..++.+..|++.||+|||+++..+..+..++.+...+..
T Consensus 30 ~~~~~l~~~---------~~~s~~~~g~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---- 95 (390)
T PRK03545 30 GLLSDIAQS---------FHMQTAQVGLM-LTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW---- 95 (390)
T ss_pred cchHHHHhH---------cCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc----
Confidence 345666555 45555555544 4567778888889999999999999999999888877776665521
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHH
Q 004754 611 GSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYA 690 (732)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~ 690 (732)
+.+..++..++.+.+. ....+....+..+.+|++.|+.+.|+......+|..++|.+.+.+.+..||++.|++.+
T Consensus 96 ----~~~~l~~~r~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~ 170 (390)
T PRK03545 96 ----NFTVLLISRIGIAFAH-AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIG 170 (390)
T ss_pred ----cHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHH
Confidence 1122222222222222 22345556778999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCC
Q 004754 691 VVCVISWIFVFIKVPETK 708 (732)
Q Consensus 691 ~~~~i~~i~~~~~~~et~ 708 (732)
+++++..++.+..+|+.+
T Consensus 171 ~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 171 GGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHhCCCCC
Confidence 988888777666677643
No 133
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.27 E-value=1.4e-10 Score=126.83 Aligned_cols=178 Identities=13% Similarity=0.049 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
.+...+..+........+....|.+.+++|. +..+.++......++..++.+++|+++||+|||+.+.++.++.+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFENAGV--STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 3334444444444344455567888889998 67788899999999999999999999999999999999988888877
Q ss_pred HHHHhh-----h------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 88 LVMLWS-----P------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 88 ll~a~a-----~------s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
++..+. + +...+....++.+.......+....++.|.+|+++|+.++++.+....+|.+++ +.....
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~--~~~~~~ 441 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIV--GFLFPT 441 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHH--HHHHHH
Confidence 766521 1 222233333333322223346667788999999999999999999999999999 444455
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 157 l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
..+..+|++.|++.++++++.+++.+++.||++
T Consensus 442 ~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 442 MLESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 555678999999999888887777777788763
No 134
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.25 E-value=9.1e-11 Score=130.93 Aligned_cols=179 Identities=15% Similarity=0.104 Sum_probs=130.8
Q ss_pred HHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhH
Q 004754 513 VGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTI 592 (732)
Q Consensus 513 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~ 592 (732)
+.+.+..+.............|.+.++.|. +..+ ..+....+.++.+++.++.|+++||+|||++++.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGDLGS---------SLSQ-VQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------Chhh-hhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 344444444444556677788888887654 3333 444556788999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004754 593 PILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 593 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
.+..++.++..... +.+..++..++.+.+. ....+....+..|.+|++.|+.+.++......+|..++|.+
T Consensus 75 ~~~~~~~~~~~~~~--------~~~~l~~~~~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 75 FAFTLGSLLCGVAP--------NLELMIIFRVIQGFGG-GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHHHHHHHHHhCcC--------CHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 87777766655421 1122222222222222 23345666788999999999999999999999999999999
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 004754 673 LPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGM 710 (732)
Q Consensus 673 ~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~ 710 (732)
.+++.+..||++.|++.+.++++..++..+.+||++..
T Consensus 146 ~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 146 GGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred HhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccc
Confidence 99999999999999998888888877777777775543
No 135
>PRK12382 putative transporter; Provisional
Probab=99.25 E-value=5.1e-10 Score=122.19 Aligned_cols=157 Identities=17% Similarity=0.157 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004754 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (732)
Q Consensus 23 ~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~ 102 (732)
..+....|.+.++.+. + ..++..+.+.++..++.++.|++.||+|+|+.+.++..+.+++.++..+.++.+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (392)
T PRK12382 233 AVIGTFVSLYFASKGW--A--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAG 308 (392)
T ss_pred hHHHHHHHHHHHhcCC--c--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 3344444555556666 3 34566777888889999999999999999999999999888888888888888888889
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 004754 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 103 R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
.++.|++.+..++...+.+.+.+|+++||++.++.+....+|..++ +.......+..||+..|.+.+++.++..++.+
T Consensus 309 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig--~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVS--GPLAGMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999889888999999999999999999999999999999 55556666777999999999888877666555
Q ss_pred hhc
Q 004754 183 FYL 185 (732)
Q Consensus 183 ~~~ 185 (732)
++.
T Consensus 387 ~~~ 389 (392)
T PRK12382 387 LSF 389 (392)
T ss_pred hhc
Confidence 443
No 136
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.24 E-value=3.4e-09 Score=120.43 Aligned_cols=176 Identities=17% Similarity=0.251 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHH----HHHHHHHHHhHHHhhhhhCChHHHHHHH
Q 004754 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMS----LIGATCITTCSGAIADWLGRRPMLIVSS 80 (732)
Q Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif----~IG~~Ig~~~~g~LsDrfGrR~vLligl 80 (732)
+.+....++-.+..++.........++....++.+. ....+...... .+...+.++..|.++||+|||..+.+.+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~-~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDY-QLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCc-cchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 345566666666677766666666676666665421 22333333333 6777889999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHH--HhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Q 004754 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFG--IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (732)
Q Consensus 81 lL~aIgsll~a~a~s~~~LiI~R~L~G~g--~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~ 158 (732)
+...+..++..+.. +|.++ +.|+. .+.......++++|....++|....++......++..++ +.......
T Consensus 100 ~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~--p~~~~~~~ 172 (463)
T KOG2816|consen 100 FGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIG--PALGGYLV 172 (463)
T ss_pred HHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHH--HHHHHHHH
Confidence 99888888777766 33333 33332 344567788999999999999999999999999999998 55555555
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 159 ~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
...+.-.+|.+..+..++..+..++++||+
T Consensus 173 ~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 173 KFLGIALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence 567788899999988888888888999998
No 137
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=6.4e-10 Score=122.80 Aligned_cols=158 Identities=16% Similarity=0.186 Sum_probs=118.1
Q ss_pred hHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc
Q 004754 532 YTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG 611 (732)
Q Consensus 532 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 611 (732)
.+|.+.++ +|.++.+.+... .+..++..++.++.|++.||+|||++++.+..+..++.+...+.
T Consensus 42 ~l~~~~~~---------~g~s~~~~g~~~-~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~------ 105 (394)
T PRK10213 42 LLTPMAQD---------LGISEGVAGQSV-TVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA------ 105 (394)
T ss_pred hHHHHHHH---------cCCCHHHHHHHH-HHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH------
Confidence 45555555 455555555444 45778888899999999999999999999988888776665442
Q ss_pred cchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHH
Q 004754 612 SVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAV 691 (732)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~ 691 (732)
.+.+..++.-++.+.+.+. ..+....++.|.+|++.|+.+.++......+|..++|.+.+++.+..||++.|++.++
T Consensus 106 --~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 182 (394)
T PRK10213 106 --NSFSLLLIGRACLGLALGG-FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAV 182 (394)
T ss_pred --ChHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 1122333333333433333 3456667889999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhccCCC
Q 004754 692 VCVISWIFVFIKVPETK 708 (732)
Q Consensus 692 ~~~i~~i~~~~~~~et~ 708 (732)
+++++.++....+||++
T Consensus 183 l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 183 MGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHCCCCC
Confidence 87777666666677764
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.24 E-value=1.8e-10 Score=122.15 Aligned_cols=164 Identities=17% Similarity=0.103 Sum_probs=122.5
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004754 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
..+....|.+.++. |.+..+. .++..+..++.+++.++.|+++||+|||+.+..+..+..++.+++.+..
T Consensus 11 ~~~~~~~~~~~~~~---------g~s~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDL---------GLSAAQY-GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HhhhHhHHHHHHhh---------CCChhhH-HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 44556666666654 4455444 4455678899999999999999999999999888877777766665521
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004754 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
+.+..++..++.+.+.+ ...+....+..|.+|++.|+.+.++......+|..+++.+.+.+.+..+|++.|
T Consensus 81 --------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~ 151 (399)
T TIGR00893 81 --------AYVSLYILRVLLGAAEA-PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAF 151 (399)
T ss_pred --------CHHHHHHHHHHHHHHHH-hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHH
Confidence 12233333334433333 334555678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004754 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
++.++++++..++.++..||++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 152 IIEGVLGIIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHHHHHHHHhhheecCCCC
Confidence 99888888777777666776544
No 139
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.24 E-value=6e-08 Score=107.54 Aligned_cols=118 Identities=20% Similarity=0.181 Sum_probs=92.4
Q ss_pred HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHHH-HHHHHHHHHHHHHhh-----h------
Q 004754 32 IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIV-SSVLYFIGGLVMLWS-----P------ 94 (732)
Q Consensus 32 I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG-----rR~vLli-gllL~aIgsll~a~a-----~------ 94 (732)
+..|+++ .....+.+.++..+. ....+.+|+.+|+.+ ||..+++ |.++.+.+..+..++ .
T Consensus 6 MIvEL~v--pA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGV--PAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhcc--HHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 5678888 778888888888776 567999999999999 8766554 555555555544432 1
Q ss_pred --hH---HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 95 --NV---YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 95 --s~---~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
.+ ....++-++.|+|.+.......+++.|..|+++|+++.++..+..-+|.+++.+..
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 11 24445577899999999999999999999999999999999999999999995544
No 140
>PRK10054 putative transporter; Provisional
Probab=99.24 E-value=4.7e-10 Score=123.90 Aligned_cols=168 Identities=13% Similarity=0.149 Sum_probs=120.0
Q ss_pred HhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHH
Q 004754 522 QLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVV 601 (732)
Q Consensus 522 ~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~ 601 (732)
...+......++|.++++ .+|++..+.+... .+..+..+++.++.|+++||+|||+.++.+..+..++.+.
T Consensus 19 ~~~g~~~~~~~l~~~l~~--------~~g~s~~~~g~~~-s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~ 89 (395)
T PRK10054 19 LTIGRGATLPFMTIYLSR--------QYSLSVDLIGYAM-TIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA 89 (395)
T ss_pred HHHHHHHHHHHHHHHHHH--------HcCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Confidence 344556667778887765 3456665555554 4567888889999999999999999988888777666655
Q ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004754 602 LVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
+.+.. +.+..++...+...++. ...+....+..|.+|++.|+++.|+.+....+|.+++|.+.+.+.+ .|
T Consensus 90 ~~~~~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g 159 (395)
T PRK10054 90 IPLVN--------NVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHHh--------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc
Confidence 54421 11222222222222222 3345566778999999999999999999999999999999998875 78
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 682 LAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 682 ~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
|+.+|++.+++++++.++..+.+|+++
T Consensus 160 ~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 160 INLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999888888877666666666554
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.23 E-value=5.3e-10 Score=121.81 Aligned_cols=161 Identities=19% Similarity=0.183 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHhCCCCc--hhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004754 24 TIAGAVLYIKREFHLETE--PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 24 ~~~~~~~~I~~dlgl~~s--~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI 101 (732)
.+.+.++....+.+.+.+ ....+++.+++.++..++.+++|+++||+|||+++.++.++.+++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 344445544444432111 123566777778888899999999999999999999998888888877777788888889
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 004754 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 102 ~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
.+++.|++.+...+...+++.+..|+++||+..++.+....+|.+++ +.......+..+|++.|++.+++.++..++.
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~g--p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTG--PLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhh--HHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 5555666677799999999998888776665
Q ss_pred Hhhcc
Q 004754 182 IFYLP 186 (732)
Q Consensus 182 ~~~~~ 186 (732)
++..+
T Consensus 395 ~~~~~ 399 (408)
T PRK09874 395 WNSLR 399 (408)
T ss_pred HHHHH
Confidence 54443
No 142
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.23 E-value=8.7e-10 Score=120.59 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~ 104 (732)
+...+|.+.++.|. +..+.+++.+.+.++..++.++.|+++||+|||+.+.++.+..+++.++....++.+.+.+..+
T Consensus 239 ~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (406)
T PRK11551 239 LLNWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGF 316 (406)
T ss_pred HHHHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33446777788898 8889999999999999999999999999999999998877777777777777778888888888
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHH
Q 004754 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 105 L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
+.|++.+...+...+++.|.+|+++|+++.++.+....+|.++++ .....+.+. .+|...+.+.....++..++.+
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~--~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 317 AAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGP--LLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHh--hhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999988888899999999999999999999999999999999994 444444443 3566677666665555444433
No 143
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.23 E-value=4.2e-10 Score=125.00 Aligned_cols=181 Identities=12% Similarity=0.071 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004754 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
..++..++.++.+......+.+..|.+.++ +|.+..+.+. ...+..++..++.++.|++.||+|||+++.
T Consensus 8 ~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~---------~~~s~~~~g~-~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~ 77 (412)
T TIGR02332 8 RLIIFLFILFIFSFLDRINIGFAGLTMGKD---------LGLSATMFGL-AATLFYAAYVICGIPSNIMLAIIGARRWIA 77 (412)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHhhHhh---------cCCCHHHHHH-HHHHHHHHHHHHHhhHHHHHHHhChHHHHH
Confidence 344444444444444444555566654454 4566555444 455678889999999999999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 004754 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIV 669 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~ 669 (732)
.+..+..++.+...+.. +.+..++.-++.+.+.+ +..+....++.|.+|++.|+.+.++.+....+|.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 78 GIMVLWGIASTATMFAT--------GPESLYLLRILVGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777665521 11222222233333333 2335555677999999999999999999999999999
Q ss_pred HhHHHHHHH------hhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 670 TYSLPVLLN------SVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 670 ~~~~~~l~~------~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
+.+.+++.+ ..||+++|++.++.+++..++.++++||++.
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 999998875 3599999999888887777777777888764
No 144
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.23 E-value=7.5e-10 Score=124.71 Aligned_cols=169 Identities=17% Similarity=0.081 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~-~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgs 87 (732)
+.+++..++.......+...+| ++.+++|+ +..+.++..+++.++..++.+++|+++||+|||+.+.+...+..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 3344445554444444555566 56678999 88899999999999999999999999999999987766544444333
Q ss_pred HH--HHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH-HHHHHHHHHHHHHhhc-----
Q 004754 88 LV--MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSLMT----- 159 (732)
Q Consensus 88 ll--~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~-G~aIg~l~~l~~~l~~----- 159 (732)
.+ ....++.+.+.+++++.|++.............|.+|++.||.+.++.+....+ |.++++ .......+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~--~~~G~i~~~~~~g 416 (467)
T PRK09556 339 TLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAK--VGLGMIADPTKNG 416 (467)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHh--hhHHHHhcccccc
Confidence 22 223456667778888888754444344446677999999999999999988886 767874 44444444
Q ss_pred -------cchhHHHHHHHHHHHHHHHHHH
Q 004754 160 -------APSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 160 -------~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
..+|+..|.+..+.+++.+++.
T Consensus 417 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 417 TPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred cccccccccChHHHHHHHHHHHHHHHHHH
Confidence 4689999998877777655443
No 145
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.22 E-value=9.7e-10 Score=122.87 Aligned_cols=163 Identities=15% Similarity=0.104 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hH--HHHH
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NV--YVLL 100 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~--s~--~~Li 100 (732)
+....|.+.+++|. +....++......++..++.+++++++||+|||++++.+.++.+++.+++.+.. +. ....
T Consensus 290 ~~~~~p~i~~~~g~--~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGA--STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 34456888888998 656666777778888899999999999999999999999999888877765432 11 1222
Q ss_pred HHHHHHHHHHhhH-hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HhhccchhHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLA-VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM----SLMTAPSWRLMLGVLFIPSL 175 (732)
Q Consensus 101 I~R~L~G~g~G~~-~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~----~l~~~~~Wr~~~~i~~~l~~ 175 (732)
++.++.+++.+.. .+....++.|.+|+++|+.++++.+....+|.++++...... ...+..+|++.|++.+++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 3344444444432 367789999999999999999999999999998884333211 12345688999988888888
Q ss_pred HHHHHHHhhccCCc
Q 004754 176 IYFVLTIFYLPESP 189 (732)
Q Consensus 176 i~~~l~~~~~~esp 189 (732)
+.+++.+++.||++
T Consensus 448 ~~~~~~~~~~~e~~ 461 (479)
T PRK10077 448 LAALFMWKFVPETK 461 (479)
T ss_pred HHHHHHHhccccCC
Confidence 77777777788873
No 146
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.22 E-value=5.7e-10 Score=126.95 Aligned_cols=181 Identities=17% Similarity=0.094 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004754 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
..+..+++..+....-.+.++.-+|.+.++.+. +..+ ..+....+.++...+.++.|+++||+|||++++
T Consensus 6 ~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~---------s~~~-~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~ 75 (495)
T PRK14995 6 LTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA---------SGNE-LLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLM 75 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CHhH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 445555565665555566677778988887554 3333 444555678888889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccC-CCccchhhHHHHHHHHHHHHHHH
Q 004754 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEI-FPTRVRGICIAICALVFWIGDII 668 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~gi~~~~~~ig~~i 668 (732)
.+..+..++.++..+.. +.+..++.-++.+++.+. ..+.......+. .|++.|+.+.|+......+|..+
T Consensus 76 ~~~~~~~~~~~~~~~a~--------~~~~li~~r~l~G~g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 76 LGGTLFGLASLAAAFSP--------TASWLIATRALLAIGAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888877766521 122333333333333332 333333344454 47899999999999999999999
Q ss_pred HHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 669 VTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 669 ~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
+|.+.+++.+..||++.|++...++++..++..+.+|+.++
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~ 187 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAG 187 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999988888887777777887543
No 147
>PRK10504 putative transporter; Provisional
Probab=99.20 E-value=8.6e-10 Score=123.55 Aligned_cols=175 Identities=15% Similarity=0.112 Sum_probs=125.8
Q ss_pred HHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHH
Q 004754 515 VGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPI 594 (732)
Q Consensus 515 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~ 594 (732)
+.+..+........+..+.|.+.++.|. +..+.+. ....+.++..++.++.|+++||+|||++++.+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------s~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~ 84 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSLGE---------SPLHMHM-VIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVL 84 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCc---------CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 3333444444556677889998887654 4444444 44567788889999999999999999999888777
Q ss_pred HHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHH
Q 004754 595 LITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLP 674 (732)
Q Consensus 595 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~ 674 (732)
..++.+...+. .+.+..++..++.+++.+ ...+....+..|.+|++.|+++.++.+....+|..++|.+.+
T Consensus 85 ~~~~~~~~~~~--------~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 85 FTLGSLFCALS--------GTLNELLLARVLQGVGGA-MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHHHHHHHh--------CCHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 66666544331 112222233333333333 234555677789999999999999999999999999999999
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 675 VLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 675 ~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.+.+..||++.|++...+++++.+......|+.+
T Consensus 156 ~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 156 LLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 9999999999999988888887777776666543
No 148
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.20 E-value=1.1e-09 Score=118.09 Aligned_cols=180 Identities=11% Similarity=0.105 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHH
Q 004754 510 ALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLL 589 (732)
Q Consensus 510 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~ 589 (732)
+.+..+.+..+........+....|.+.++. |++..+.+.+ ..+..++.+++.++.|+++||+|||+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~s~~~~g~~-~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~ 81 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEF---------GLTTVDAASL-ISAALISRWFGALMFGLWGDRYGRRLPMV 81 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCChhhHHHH-HHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3333444444444434555666667666654 4555554444 45678899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHH
Q 004754 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIV 669 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~ 669 (732)
.+..+..++.+.+.+.. +.+..++..++.+.+.+ ...+....+..|.+|++.|+.+.++.+....+|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 152 (405)
T TIGR00891 82 TSIVLFSAGTLACGFAP--------GYITMFIARLVIGIGMG-GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVA 152 (405)
T ss_pred HHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHhhhh-hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 88877777766554421 12222233333333333 2334556778999999999999999999999999999
Q ss_pred HhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 670 TYSLPVLLNSVG--LAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 670 ~~~~~~l~~~~g--~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
+.+.+.+.+..+ |+..|++.++..++. ++....+||++.
T Consensus 153 ~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-~~~~~~~~~~~~ 193 (405)
T TIGR00891 153 AQVYSLVVPVWGDGWRALFFISILPIIFA-LWLRKNIPEAED 193 (405)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHH-HHHHHhCCCChh
Confidence 999999988776 888887755544444 444556777643
No 149
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.20 E-value=2e-09 Score=115.59 Aligned_cols=150 Identities=18% Similarity=0.243 Sum_probs=122.3
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004754 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~ 110 (732)
++.+++|. ++.+.+++.+...+...++.++.|++.||+|||+++.++.++..++.++..+.++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677898 8888999888887778888999999999999999998887776666666666778888888899999999
Q ss_pred hhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 111 G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
|...+....++.|..|+ +++.++++.+....+|..++ +.......+..+|+..|++.++++++..++ .++++
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g--~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 374 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIA--GSVGGILAERWSYHAVYWFAIVMLIVALFC-LLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHH--HHHHHHHHHhccchhHHHHHHHHHHHHHHH-Hheec
Confidence 99888888999999985 56799999999999999999 454555566679999999988887775554 34444
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.19 E-value=2e-09 Score=122.17 Aligned_cols=179 Identities=13% Similarity=0.017 Sum_probs=115.7
Q ss_pred chhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccch
Q 004754 506 GVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRR 585 (732)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr 585 (732)
+.++....+.... +...........+.|.+.++. |++..+.+. +.....++.+++.++.|+++||+|||
T Consensus 33 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---------gls~~~~g~-~~~~~~~~~~~~~~~~G~l~dr~G~r 101 (476)
T PLN00028 33 PHMRAFHLSWISF-FTCFVSTFAAAPLLPIIRDNL---------NLTKSDIGN-AGIASVSGSIFSRLAMGPVCDLYGPR 101 (476)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHc---------CCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3444444444433 333333445555666676654 455555444 45567788889999999999999999
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHH
Q 004754 586 TLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIG 665 (732)
Q Consensus 586 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig 665 (732)
+++..+..+..++.+++.+.. +....++..++.+ ++.+.......+++|.+|++.|+.+.|+.+....+|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~--------s~~~l~~~r~l~G--~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g 171 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCMSLVS--------SATGFIAVRFFIG--FSLATFVSCQYWMSTMFNGKIVGTANGIAAGWGNLG 171 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHH--HHHHhhHHHHHHHHHhcChhheeHHHHHHHHHHHHH
Confidence 998887777666655554421 1112222222222 222222223446789999999999999999888888
Q ss_pred HHHHHhHHHHHHH---------hhchhHHHHHHHHHHHHHHHHHHHhcc
Q 004754 666 DIIVTYSLPVLLN---------SVGLAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 666 ~~i~~~~~~~l~~---------~~g~~~~f~~~~~~~~i~~i~~~~~~~ 705 (732)
..+++.+.+.+.. ..||+++|++.++++++..++.+++.+
T Consensus 172 ~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 172 GGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8888877766543 148999999999888877666655443
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.19 E-value=1.1e-09 Score=123.18 Aligned_cols=194 Identities=11% Similarity=0.111 Sum_probs=127.9
Q ss_pred ccCCChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHH
Q 004754 494 AKGFSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIA 573 (732)
Q Consensus 494 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~ 573 (732)
+++.++.+..++..++ .+..+.+..+........+....|.+.++. |.+..+.+.+. ....++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~s~~~~~~~~-~~~~~~~~~~~~ 73 (496)
T PRK03893 5 TQNIPWYRHLNRAQWK-AFSAAWLGYLLDGFDFVLITLVLTEVQGEF---------GLTTVQAASLI-SAAFISRWFGGL 73 (496)
T ss_pred CccccccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------CCCHHHHHHHH-HHHHHHHHHHHH
Confidence 3455566666554444 333343444433334455556667766654 45555555544 456788889999
Q ss_pred HHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhh
Q 004754 574 VAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGI 653 (732)
Q Consensus 574 i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 653 (732)
+.|+++||+|||++++.+..+..++.+++.+.. +.+..++..++.+++.+ +..+....+..|.+|++.|+.
T Consensus 74 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~ 144 (496)
T PRK03893 74 LLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP--------GYWTLFIARLVIGMGMA-GEYGSSATYVIESWPKHLRNK 144 (496)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCHHHHHH
Confidence 999999999999999988877777776665521 11222222222222222 334555677899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 654 CIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 654 ~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
+.++......+|.++++.+.+.+.+..||++.|++.++.+++ .++....+||++
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~ 198 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAE 198 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCch
Confidence 999999999999999999999999999999988764443333 233344556653
No 152
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.18 E-value=2.3e-10 Score=121.57 Aligned_cols=164 Identities=14% Similarity=0.073 Sum_probs=118.9
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
...+....|.+.++.| .+..+ ..++..+..++.+++.++.|+++||+|||++++.+..+..++.+++.+.
T Consensus 11 ~~~~~~~~~~~~~~~g---------~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 11 RKNFALAMPYLVEEIG---------LSKTD-LGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred HHhhhhhhHHHHHHhC---------CCHhH-HHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 3445666777776654 44444 4445557789999999999999999999999999888887777766653
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHH-hHHHHHHHhhchhH
Q 004754 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVT-YSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~-~~~~~l~~~~g~~~ 684 (732)
. +.+..++..++.+.+.+ ...+....++.|.+|++.|+.+.++.+....+|.++++ .+.+.+.+..+|+.
T Consensus 81 ~--------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 81 T--------SLWVMAALWALNGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred h--------hHHHHHHHHHHHHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 1 11222222222222222 23456667889999999999999999999999999999 46666667789999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCC
Q 004754 685 VFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.|++.++++++..++.++..||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCc
Confidence 999888888777777777777654
No 153
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.17 E-value=1.6e-09 Score=120.47 Aligned_cols=153 Identities=16% Similarity=0.147 Sum_probs=113.9
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Q 004754 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLY 626 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (732)
..++.+....... ..++.++..++.++.|+++||+|||++++.+..+..++.++..+. .+.+..++.-++.
T Consensus 44 ~~~~~~~~~~~~~-~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--------~~~~~l~~~r~l~ 114 (413)
T PRK15403 44 RDFNADVSLAPAS-VSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT--------TSMTQFLIARFIQ 114 (413)
T ss_pred HHhCCCHHHHHHH-HHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc--------CCHHHHHHHHHHH
Confidence 3566666555444 456778889999999999999999999998877777666655542 1122222222333
Q ss_pred HHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccC
Q 004754 627 FCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 627 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~e 706 (732)
+++.+ ...+....+..|.+|++.++.+.++.+....++..++|.+.+.+.+..||++.|++.+++.+++.++.++.+||
T Consensus 115 Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 115 GTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33222 22344557778999999999999999999999999999999999988899999999999888887776777898
Q ss_pred CCC
Q 004754 707 TKG 709 (732)
Q Consensus 707 t~~ 709 (732)
++.
T Consensus 194 ~~~ 196 (413)
T PRK15403 194 TVK 196 (413)
T ss_pred Ccc
Confidence 754
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.16 E-value=1.9e-09 Score=114.27 Aligned_cols=163 Identities=13% Similarity=0.028 Sum_probs=115.9
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.......+|.+..+.+ .+.. ...++..+..+..+++.++.|+++||+|||++++.+..+..++.+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~---------~s~~-~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 15 TAITQVALPLYVLAGT---------GSAS-VLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHhh---------ccHH-HHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677776654 3343 44445567788999999999999999999999998887777666665553
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHH
Q 004754 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGV 685 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~ 685 (732)
.... ..+.+..++..++...+.+ ...+....+..|.+|++.|+.+.++.+....+|.+++|.+.+.+.+..||+..
T Consensus 85 ~~~~---~~~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~ 160 (365)
T TIGR00900 85 ALLG---GLNIWQVYVLAGILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWA 160 (365)
T ss_pred HHcC---CCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 2211 0112222333333333332 23455567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004754 686 FGMYAVVCVISWIFVFI 702 (732)
Q Consensus 686 f~~~~~~~~i~~i~~~~ 702 (732)
|++.++.++++.++.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 161 IWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 98887777666554443
No 155
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=1.6e-09 Score=118.48 Aligned_cols=164 Identities=13% Similarity=0.105 Sum_probs=120.4
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004754 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
......+|.+.++.| .+..+.+ +......++.+++.++.|+++||+|||+.+..+..+..++.++..+..
T Consensus 20 ~~~~~~l~~~~~~~g---------~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~ 89 (382)
T PRK10091 20 FGIMGVLTELAHDVG---------ISIPAAG-HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS 89 (382)
T ss_pred HHHHhChHHHHHHcC---------CCHHHHh-HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 345556777776654 4444444 445567899999999999999999999999998888877776655421
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004754 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
+.+..++..++.+.+.+. ..+....+..|.+|++.|+.+.++......+|..+++.+.+++.+..||+++|
T Consensus 90 --------~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f 160 (382)
T PRK10091 90 --------SYLMLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF 160 (382)
T ss_pred --------cHHHHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHH
Confidence 122222333333333332 23444566789999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004754 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
++.++++++..+..++.+||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~ 183 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD 183 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc
Confidence 99998888777777777887643
No 156
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.16 E-value=2e-09 Score=118.91 Aligned_cols=159 Identities=18% Similarity=0.108 Sum_probs=134.7
Q ss_pred HHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004754 26 AGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 26 ~~~~~~I~~d-lgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~ 104 (732)
...+|.+.++ +|. +....|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3445655555 898 8889999999999999999999999999988888888888888888888888888888888899
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004754 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 105 L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
+.|++.+...+...+++.|.+|++.||+++++......+|..++ +.....+.+..|++..+.+.+.+.++..++....
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g--~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG--AALLGGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH--HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99999988888888999999999999999999999999999999 5555666677788888888887777766666677
Q ss_pred ccCC
Q 004754 185 LPES 188 (732)
Q Consensus 185 ~~es 188 (732)
+++.
T Consensus 399 ~~~~ 402 (417)
T PRK10489 399 LGEL 402 (417)
T ss_pred cccc
Confidence 7766
No 157
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.15 E-value=6.4e-10 Score=117.42 Aligned_cols=151 Identities=23% Similarity=0.259 Sum_probs=110.8
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++|.+..+.+. +..+..+...++.++.|+++||+|||++++.+..+..++.++..+. .+.+..++..++.+
T Consensus 26 ~~~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~g 96 (352)
T PF07690_consen 26 ELGLSPSQIGL-LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------SNFWLLLIARFLLG 96 (352)
T ss_dssp CSTTTSHCHHH-HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--------CCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--------hhHHHHhhhccccc
Confidence 34555555555 4556788999999999999999999999999888888884444421 12222333333333
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004754 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et 707 (732)
.+.+ ...+....++.|.+|++.|+.+.++.+....+|.++++.+.+.+.+..||+.+|++.+++++++.++...+++++
T Consensus 97 ~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 175 (352)
T PF07690_consen 97 IGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEP 175 (352)
T ss_dssp HHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---
T ss_pred cccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhc
Confidence 3332 345566678899999999999999999999999999999999999888999999999999999877654555544
Q ss_pred C
Q 004754 708 K 708 (732)
Q Consensus 708 ~ 708 (732)
+
T Consensus 176 ~ 176 (352)
T PF07690_consen 176 P 176 (352)
T ss_dssp S
T ss_pred c
Confidence 3
No 158
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.15 E-value=1.9e-09 Score=118.79 Aligned_cols=175 Identities=18% Similarity=0.171 Sum_probs=117.8
Q ss_pred HHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHH
Q 004754 514 GVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIP 593 (732)
Q Consensus 514 ~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~ 593 (732)
...+..+..........+.+|.+.++. |.+..+. .+...+..++.+++.++.|+++||+|||++++.+..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~s~~~~-~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~ 91 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFYIMYLIKADL---------GLTDMEG-AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHh---------CCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 333333333334445566666666654 4455444 455566889999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHH
Q 004754 594 ILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSL 673 (732)
Q Consensus 594 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~ 673 (732)
+..++.++..+.. +.+..++.-++.+.+.+ +..+....++.|.+|++.|+++.++......+|.++++.+.
T Consensus 92 ~~~~~~~~~~~~~--------~~~~l~~~r~l~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 92 AYSVGTGLSGLAS--------GVIMLTLSRFIVGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HHHHHHHHHHHHh--------HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH
Confidence 8888777665531 12222222222222222 23455567789999999999999999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 674 PVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 674 ~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
+.+.+..||++.|++.+...+ ..++.....||++
T Consensus 163 ~~l~~~~~w~~~f~i~~~~~~-~~~~~~~~~p~~~ 196 (426)
T PRK12307 163 PSFAEAYGWRAAFFVGLLPVL-LVIYIRARAPESK 196 (426)
T ss_pred HHHcccCCHHHHHHHHHHHHH-HHHHHHHHCCCCh
Confidence 999898999999887443332 2223333345553
No 159
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.15 E-value=4.4e-09 Score=114.86 Aligned_cols=148 Identities=19% Similarity=0.163 Sum_probs=120.6
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 004754 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (732)
Q Consensus 26 ~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L 105 (732)
...+|.+.++.|. +..+.|++.++..++..+++++.|++.||+|+|+++..+.++.+++.+... + ......+.++
T Consensus 220 ~~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l 294 (381)
T PRK03633 220 YGLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFI 294 (381)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHH
Confidence 3456777777888 888999999999999999999999999999999999888888777665443 2 2344457788
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 004754 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (732)
Q Consensus 106 ~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l 180 (732)
.|++.+..+|...+++.|..|+++++.+.+......++|.+++ |.......+..+|++.|.+.+.+.++..++
T Consensus 295 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~ig--p~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 295 LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLG--PSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 8888888889999999999998888888888888899999999 555666777789999999988887765543
No 160
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.14 E-value=2.2e-09 Score=117.87 Aligned_cols=151 Identities=17% Similarity=0.151 Sum_probs=110.7
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
++.+..+.+.. .....++..++.++.|+++||+|||++++.+..+..++.+.+.... +.+..++..++.+.
T Consensus 43 ~~~s~~~~~~~-~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G~ 113 (406)
T PRK15402 43 FNAGAEWVPTS-MTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--------SIEQFTLLRFLQGI 113 (406)
T ss_pred hCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHh
Confidence 45555444444 4567888999999999999999999999888877777666554421 11122222222222
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
+.+ ...+....++.|.+|++.|..+.++...+..++..++|.+.+.+.+..||+++|++.+++++++.+..++..||++
T Consensus 114 ~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 114 GLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred Hhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 222 2234556777899999999999999988888999999999999999899999999999888888777777788875
Q ss_pred C
Q 004754 709 G 709 (732)
Q Consensus 709 ~ 709 (732)
.
T Consensus 193 ~ 193 (406)
T PRK15402 193 G 193 (406)
T ss_pred c
Confidence 4
No 161
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.14 E-value=2.1e-09 Score=114.84 Aligned_cols=157 Identities=21% Similarity=0.191 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH--HHH
Q 004754 15 NLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL--VML 91 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~-~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsl--l~a 91 (732)
.++.......+...+|.+. +++|. +..+.+++.+...++..++.+++|+++||+|||+++.++..+..+..+ +..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444455566554 67888 788899999999999999999999999999999988766555444331 222
Q ss_pred h--hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccch-hHHHH
Q 004754 92 W--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPS-WRLML 167 (732)
Q Consensus 92 ~--a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l-~~~~~~~G~aIg~l~~l~~~l~~~~~-Wr~~~ 167 (732)
+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++ |.....+.+..+ |+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~--p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFA--PYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHH--HHHHHHHHHHcCcchhHH
Confidence 2 24667777888999999999999999999999999999999998 456667788888 445555556666 88877
Q ss_pred HHHHHHHH
Q 004754 168 GVLFIPSL 175 (732)
Q Consensus 168 ~i~~~l~~ 175 (732)
+...+.++
T Consensus 384 ~~~~~~~l 391 (394)
T TIGR00883 384 YYLAALAL 391 (394)
T ss_pred HHHHHHHH
Confidence 76665443
No 162
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.13 E-value=1.6e-09 Score=116.93 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=120.1
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004754 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
....+|.+.++. |++..+.+. ...+..++..++.++.|+++||+|||+++..+..+..++.+.+.+..
T Consensus 10 ~~p~~~~~~~~~---------~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-- 77 (377)
T PRK11102 10 YLPALPVIAADF---------GVSAGSVQM-TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-- 77 (377)
T ss_pred HhccHHHHHHHh---------CCCHHHHHH-HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--
Confidence 445566666654 455544444 45567888999999999999999999999988888877777665421
Q ss_pred hcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHH
Q 004754 609 KMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGM 688 (732)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~ 688 (732)
+.+..++..++.+.+.+ ...+....++.|.+|++.|+++.++.+....+|..++|.+.+.+.+..||+..|++
T Consensus 78 ------~~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~ 150 (377)
T PRK11102 78 ------TIDQLIYMRFLHGLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWV 150 (377)
T ss_pred ------cHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHH
Confidence 11222222223232222 23344567789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCC
Q 004754 689 YAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 689 ~~~~~~i~~i~~~~~~~et~~ 709 (732)
.++++++..++..+.+||++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ 171 (377)
T PRK11102 151 LALAAILAAALVFFFIPETLP 171 (377)
T ss_pred HHHHHHHHHHHHHHhCCccCc
Confidence 998888887777777787643
No 163
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.12 E-value=6.4e-09 Score=113.94 Aligned_cols=152 Identities=13% Similarity=0.073 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004754 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 22 ~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI 101 (732)
...+....|...+++|. +..+.|++.++..++.+++.++++++.||+|+|+++.++.++.++..++++++++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 33334455555577998 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 102 ~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
.+++.|+..|...+....++.+. |+++|+...++++ ...++|.+++ +...+.+.+..++ ..|.+.++++++.++
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g--~~~~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIF--TAFAGFIYPTLGA-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999976 5678999999 5555666666676 667777777766443
No 164
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.12 E-value=7.3e-09 Score=114.25 Aligned_cols=164 Identities=14% Similarity=0.075 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHH-HHHHHHHHHHHHHHh
Q 004754 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI-VSSVLYFIGGLVMLW 92 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLl-igllL~aIgsll~a~ 92 (732)
..++.......+...+|.+.+++|. +..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+++.+
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 230 VRIINTIGLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444444444555567877788998 8888899999999999999999999999999988764 333333443333322
Q ss_pred -----hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 004754 93 -----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (732)
Q Consensus 93 -----a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~ 167 (732)
.++.+.+++..++.|++.+...+ ....+.|..| ++||++.++.+....+|..++ |.......+..||+.++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~g--p~i~g~l~~~~g~~~~~ 383 (402)
T TIGR00897 308 IPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLA--PAIAVLFIGFFGAIGVV 383 (402)
T ss_pred HHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHH--HHHHHHHHhhcchHHHH
Confidence 23567777889999998887655 4456677655 689999999999999999999 55556666777999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 004754 168 GVLFIPSLIYFVLTIF 183 (732)
Q Consensus 168 ~i~~~l~~i~~~l~~~ 183 (732)
++.+++.++..++.+|
T Consensus 384 ~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 384 WIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998887776655443
No 165
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.12 E-value=4.2e-09 Score=115.08 Aligned_cols=182 Identities=12% Similarity=0.064 Sum_probs=121.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhH
Q 004754 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTL 587 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~ 587 (732)
+|.+++......+..+ .........|.+.++. |.+..+.+. ...+..++..++.++.|+++||+|||+.
T Consensus 7 ~~~l~~~~~~~~~~~~-~~~~~~p~~~~i~~~~---------~~s~~~~~~-~~~~~~~~~~~~~~~~G~l~Dr~grr~~ 75 (394)
T PRK11652 7 VNLLFMLVLLVAVGQM-AQTIYVPAIADMARDL---------NVREGAVQA-VMAAYLLTYGLSQLFYGPLSDRVGRRPV 75 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhccHHHHHHHh---------CCCHHHHHH-HHHHHHHHHHHHHHhhhhHHHhcCChHH
Confidence 4444444444443332 2222333456666554 455544444 4556889999999999999999999999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHH
Q 004754 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDI 667 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~ 667 (732)
++.+..+..++.+..... + +.+..++..++.+++.+ ...+....++.|.++.+.++.+.++.+....++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~---~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (394)
T PRK11652 76 ILVGMSIFILGTLVALFA-----H---SLTVLIAASAIQGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPL 146 (394)
T ss_pred HHHHHHHHHHHHHHHHHH-----c---cHHHHHHHHHHHHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 988877776666554431 0 11122222222222222 12344456678889989999999999999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
++|.+.+.+.+..||+.+|++.++.+++..++..+.+||++.
T Consensus 147 ~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 147 LAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred HHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 999999999998999999999888777766666667787653
No 166
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=2e-09 Score=118.45 Aligned_cols=163 Identities=13% Similarity=0.070 Sum_probs=114.5
Q ss_pred HHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHH
Q 004754 527 NGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 527 ~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
..+...+|.+.++. |++..+.+. +...+.++..++.+..|++.||+|||++++.+......+.+ ....
T Consensus 8 ~~~~~~lp~i~~~~---------~~s~~~~g~-~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~- 75 (368)
T TIGR00903 8 VTFSPVLSLVAEDI---------DVSKEELGL-LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD- 75 (368)
T ss_pred HHHHhhHHHHHHHh---------CcCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH-
Confidence 44556777777764 455544444 45567888999999999999999999876655443333221 1110
Q ss_pred HhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHH
Q 004754 607 VIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVF 686 (732)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f 686 (732)
. .+....++.-++.+.+. +.........+|.+|++.|+++.++......+|..+++.+.+++.+..||+..|
T Consensus 76 ~------~~~~~l~~~R~l~G~g~--~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f 147 (368)
T TIGR00903 76 P------FNYEWLLACQLLAALGQ--PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLI 147 (368)
T ss_pred h------ccHHHHHHHHHHHHhHh--HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 0 01222223333333332 222333445589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCC
Q 004754 687 GMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 687 ~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
++.++++++..++.++++||++.
T Consensus 148 ~~~~~l~~~~~~~~~~~lp~~p~ 170 (368)
T TIGR00903 148 IPIAAVAAAGIILVLAALPALPF 170 (368)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999988888888888888643
No 167
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.10 E-value=6.5e-09 Score=115.40 Aligned_cols=162 Identities=19% Similarity=0.194 Sum_probs=132.2
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004754 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
.-+.+.-.+|.+.++.+ ++..+.++++ .++.++..++.++...+.+|+.||++++..+.+++++.++..+
T Consensus 28 tEfv~~gLLp~iA~dl~---------vs~~~aG~li-s~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~al 97 (394)
T COG2814 28 TEFVPVGLLPPIAADLG---------VSEGAAGQLI-TAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSAL 97 (394)
T ss_pred HHHHHHhchHHHHHHcC---------CCHHHHHHHH-HHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777654 5555555555 4689999999999999999999999999999999999988887
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004754 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
... ....++.=++.....+ .+.++...+..++.|+++|+.++++......+...++.++..++-+..||+.
T Consensus 98 Ap~--------f~~Ll~aR~~~g~a~G-~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 98 APS--------FAVLLLARALAGLAHG-VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred hcc--------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 422 2233333344444433 4456677888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 004754 685 VFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~~~~ 705 (732)
+|+..+++++++.+..+..+|
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999
No 168
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.10 E-value=2.3e-09 Score=120.84 Aligned_cols=160 Identities=8% Similarity=0.017 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh--CChHHHHH--HHHHHHHHHHHH
Q 004754 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPMLIV--SSVLYFIGGLVM 90 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf--GrR~vLli--gllL~aIgsll~ 90 (732)
.++...........+|.+.+++|. +..+.+++.++..++.+++++++|+++||. ++|+...+ +.++.+++.+++
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~ 327 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC 327 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333334455666678898 889999999999999999999999999984 33433333 334444555566
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHH
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGV 169 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~-~Wr~~~~i 169 (732)
.+.++++.+++.+++.|++.+...+...+++.|.+|+++++..+++.+...++|.+++ +.......+.. +|++.|++
T Consensus 328 ~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ig--p~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 328 ALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIG--PPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHcc--ccceeeeehhcCCcchHHHH
Confidence 6778889999999999999999999999999999999999999999999999999999 55555555544 69999999
Q ss_pred HHHHHHHHH
Q 004754 170 LFIPSLIYF 178 (732)
Q Consensus 170 ~~~l~~i~~ 178 (732)
.+++.++..
T Consensus 406 ~~~~~li~~ 414 (455)
T TIGR00892 406 SGSIVVSAG 414 (455)
T ss_pred hhHHHHHHH
Confidence 888766544
No 169
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.09 E-value=1.6e-08 Score=114.00 Aligned_cols=157 Identities=19% Similarity=0.284 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-----ChHHHHHHHHHHHHHHHHHHhh----hhH
Q 004754 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIVSSVLYFIGGLVMLWS----PNV 96 (732)
Q Consensus 26 ~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG-----rR~vLligllL~aIgsll~a~a----~s~ 96 (732)
....+++++++|+ ++++...+.++..+... .-+++|.++|-+- ||+-++++.++.+++.+.++.. .+.
T Consensus 10 ~~~~~~l~~~l~l--s~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 10 LAIYPFLKDDLGL--SPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 3456789999999 88998888888777654 4678999999873 4555566666665555555543 346
Q ss_pred HHHHHHHHHHHHHHhhHhHHHHHHHHhcCC--cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004754 97 YVLLLARLLDGFGIGLAVTLVPIYISETAP--PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (732)
Q Consensus 97 ~~LiI~R~L~G~g~G~~~~~~~alI~E~fP--~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~ 174 (732)
....+.-++..++.+....+.-+++.|... ++.||...+.......+|.+++... .+...+..++|..|.+.+++.
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l--~G~l~~~~~~~~~f~i~~~~~ 164 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLL--SGPLLDSFGPQGVFLISAALP 164 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh--hhhhhhcCCCeEEehHHHHHH
Confidence 666777788889999999999999999983 3347788888888888999998433 445566778999999888887
Q ss_pred HHHHHHHHhhccC
Q 004754 175 LIYFVLTIFYLPE 187 (732)
Q Consensus 175 ~i~~~l~~~~~~e 187 (732)
++.++..+++.+|
T Consensus 165 ~l~~~~~~~~~~e 177 (433)
T PF03092_consen 165 LLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHhhhh
Confidence 7766666666665
No 170
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.09 E-value=3.2e-09 Score=118.53 Aligned_cols=153 Identities=16% Similarity=0.108 Sum_probs=106.9
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHH
Q 004754 550 GISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCC 629 (732)
Q Consensus 550 ~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (732)
|++..+.+ +...+..++..++.++.|+++||+|||++++.+..+..++.+.+...... ........+..++...+
T Consensus 57 g~s~~~~g-~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~l~g~~ 131 (438)
T TIGR00712 57 GFSKGELG-FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWA----TSSIAIMFVLLFLNGWF 131 (438)
T ss_pred CCCHhHhH-HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccc----cchHHHHHHHHHHHHHH
Confidence 34454444 45556789999999999999999999998888777777666654432100 00111112222233333
Q ss_pred HhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH-hhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 630 FVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN-SVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 630 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.+.. .+.......|.+|++.|+++.++.+....+|+.+++.+.+...+ ..||+.+|++.++++++..++.++++||++
T Consensus 132 ~g~~-~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~ 210 (438)
T TIGR00712 132 QGMG-WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTP 210 (438)
T ss_pred hhcc-hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 3322 23344666899999999999999999999999999988876554 468999999999988887777777777754
No 171
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.09 E-value=6.5e-09 Score=115.06 Aligned_cols=164 Identities=15% Similarity=0.136 Sum_probs=117.6
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004754 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
+.+.+..+++.++.+ ++|.+....+... .+..+...+..++.|+++||+|||++++.+..+..++++.+..
T Consensus 25 ~~~~~~~~~~~~~~~--------~~g~s~~~~gl~~-~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~ 95 (400)
T PRK11646 25 GFFVVFPLISIRFVD--------QLGWAAVMVGIAL-GLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI 95 (400)
T ss_pred HHHHHHHHHHHHHHH--------HhCCcHHHHHHHH-HHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 445566677766643 3455665555444 4567777777899999999999999999988888887776654
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004754 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
. .+.+..++..++.+++.+ ...+....+..+.+|++.|+++.|+......+|..++|.+.+++. ..||++
T Consensus 96 ~--------~~~~~l~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~ 165 (400)
T PRK11646 96 A--------HEPWLLWLSCILSGLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRL 165 (400)
T ss_pred h--------ccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHH
Confidence 2 112222222222222222 233445567789999999999999999999999999999999998 679999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC
Q 004754 685 VFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~~~~et 707 (732)
.|++.+++++++.++..+.+||.
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcc
Confidence 99988888777766666666764
No 172
>PRK09952 shikimate transporter; Provisional
Probab=99.08 E-value=1.9e-08 Score=112.67 Aligned_cols=156 Identities=13% Similarity=0.144 Sum_probs=109.9
Q ss_pred HHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHHH
Q 004754 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW---S-PNVYVLLLARLL 105 (732)
Q Consensus 30 ~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~---a-~s~~~LiI~R~L 105 (732)
+++.+++|. +......+..+..+...++.+++|+++||+|||+++.++.++.+++.+.+.. . ++.+.+++..++
T Consensus 275 ~y~~~~~g~--s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 352 (438)
T PRK09952 275 NYSTQNLGL--PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIML 352 (438)
T ss_pred HHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 456677888 6665555555666677888899999999999999998887766555443322 1 234444556677
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004754 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 106 ~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
.|++.+...+...+++.|.+|.+.|+...++.. .+..+|..+++............+|+..+...+++.++.++.. +.
T Consensus 353 ~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~~ 431 (438)
T PRK09952 353 ANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-LL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-HH
Confidence 788888888889999999999999998888854 4455788888444333322223368988888888777766553 45
Q ss_pred ccCC
Q 004754 185 LPES 188 (732)
Q Consensus 185 ~~es 188 (732)
++|+
T Consensus 432 ~~~~ 435 (438)
T PRK09952 432 MKDN 435 (438)
T ss_pred cccc
Confidence 5664
No 173
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.08 E-value=1e-08 Score=112.97 Aligned_cols=164 Identities=21% Similarity=0.251 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh-hHHH
Q 004754 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP-NVYV 98 (732)
Q Consensus 20 ~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~-s~~~ 98 (732)
.....+...+|.+.+++|. +..+.|++.+++.++..++.+++|++.||+|||+.+.++..+.+++.++..+.+ +...
T Consensus 219 ~~~~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3333444456666667888 888999999999999999999999999999999999988888777766655433 2222
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCC-cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHH
Q 004754 99 LLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGVLFIPSLI 176 (732)
Q Consensus 99 LiI~R~L~G~g~G~~~~~~~alI~E~fP-~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~-~Wr~~~~i~~~l~~i 176 (732)
+ .-++.|++.+...+.......+.++ +++||+..++.+....++..++ +.....+.+.. +|...|.+.++.+++
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~g--p~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLA--PWFSGVLRSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 2 2356788888888887777777775 6789999999999999999888 44445555544 488888888888877
Q ss_pred HHHHHHhhccCCc
Q 004754 177 YFVLTIFYLPESP 189 (732)
Q Consensus 177 ~~~l~~~~~~esp 189 (732)
..++..++.||++
T Consensus 373 ~~~~~~~~~~~~~ 385 (393)
T PRK09705 373 LMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHhccccc
Confidence 7777777888874
No 174
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=6.1e-09 Score=119.29 Aligned_cols=174 Identities=19% Similarity=0.202 Sum_probs=119.9
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcc-cchhH
Q 004754 509 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDIS-GRRTL 587 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~-grr~~ 587 (732)
+.+...+.......+ .++++..++|.++.+ .+|++..+ +..+..++.+...++.+++|+++||+ |||++
T Consensus 9 ~~l~~l~~~~~~e~f-s~Yg~~~~L~~yL~~--------~lgls~~~-a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~ 78 (493)
T PRK15462 9 RAIYYVVALQIWEYF-SFYGMRALLILYLTN--------QLKYDDNH-AYELFSAYCSLVYVTPILGGFLADKVLGNRMA 78 (493)
T ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------hcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH
Confidence 334444444433333 467788899998876 24555544 44445667788888999999999998 99999
Q ss_pred HHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCcc--chhhHHHHHHHHHHHH
Q 004754 588 LLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTR--VRGICIAICALVFWIG 665 (732)
Q Consensus 588 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~gi~~~~~~ig 665 (732)
++.+..++.++.+++.... .......+.+.+..++.+. ..+...++.+|.+|++ .|.++.++.....++|
T Consensus 79 iliG~il~~lg~lll~~~~-------~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 79 VMLGALLMAIGHVVLGASE-------IHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HHHHHHHHHHHHHHHHHhh-------cchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 9998888887776554310 0011122222222233222 2344457789999986 7999999999999999
Q ss_pred HHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Q 004754 666 DIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFV 700 (732)
Q Consensus 666 ~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~ 700 (732)
++++|.+.+++.+..||+..|.+.++..+++.+..
T Consensus 151 ~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~ 185 (493)
T PRK15462 151 SIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIF 185 (493)
T ss_pred HHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998766555554443
No 175
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.08 E-value=6.2e-09 Score=111.57 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=111.8
Q ss_pred hhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHH
Q 004754 523 LSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVL 602 (732)
Q Consensus 523 ~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~ 602 (732)
+.....+..+.|.++++ ++|++..+.+. +..+..++.+++.++.|+++||+|||+.++.+..+..++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKD--------DLGLSTAQLGN-LVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHhHHhhhHHHHH--------HhCCCHHHhhH-hhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 33445566777753332 34566655444 4556789999999999999999999999999888888877766
Q ss_pred HHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh---
Q 004754 603 VLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS--- 679 (732)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~--- 679 (732)
.+... +.+..++..++.+.+ .+..+....+++|.+|++.|+.+.++......+|..+++.+.+.+...
T Consensus 85 ~~~~~-------~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~ 155 (366)
T TIGR00886 85 GLAVQ-------SYSVLLLLRLFIGIA--GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIF 155 (366)
T ss_pred HHHhh-------hHHHHHHHHHHHHHh--chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 55310 111222222222222 223344567789999999999999999988888888888888877653
Q ss_pred -------hchhHHH-HHHHHHHHHHHHHHHHhccCC
Q 004754 680 -------VGLAGVF-GMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 680 -------~g~~~~f-~~~~~~~~i~~i~~~~~~~et 707 (732)
.+|++.| +..+++.++..++.+...+|+
T Consensus 156 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 156 GAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred cccccccccccchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3788888 444555555555555555554
No 176
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.08 E-value=2.2e-09 Score=97.39 Aligned_cols=135 Identities=21% Similarity=0.241 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhc
Q 004754 564 TTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCS 643 (732)
Q Consensus 564 ~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (732)
..++.+++.++.+++.||+|||+.+..+..+..++.+.+... .+.+...+..++...+.+ ...+..+.+..
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~ 77 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS--------SNITVLIIARFLQGFGAA-FALVAGAALIA 77 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh--------ccHHHHHHHHHHHHHHHH-HHHHhHHHHHH
Confidence 456777888999999999999999888777776666554431 112222333333333333 23455667789
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCC
Q 004754 644 EIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 644 e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et 707 (732)
|.+|++.|+++.++.+....+|..+++.+.+.+.+..+|+..+++.+.+++++.++.++..|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999988999999999888888877777777764
No 177
>PRK03699 putative transporter; Provisional
Probab=99.08 E-value=9.5e-09 Score=112.92 Aligned_cols=163 Identities=17% Similarity=0.073 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a 91 (732)
++.++.......+...+|. +.+.+|+ +..+.+++.+.+.++..++.+++|+++||+++|+++.....+.+++.++..
T Consensus 212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 212 IAALLYILAQLTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Confidence 3333333333344445565 4467899 888999999999999999999999999999999999888877777766666
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004754 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
..++.+.+.+..++.|++.+..++...++..+..| ++++...++......+|.+++ +.......+..||+..+++.+
T Consensus 290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~--p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLT--FVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHH--HHHHHHHHHHhCchhhhhhhH
Confidence 67777777778899999988888888888888776 446777888888889999999 555566666779999998888
Q ss_pred HHHHHHHHH
Q 004754 172 IPSLIYFVL 180 (732)
Q Consensus 172 ~l~~i~~~l 180 (732)
++.++.+++
T Consensus 367 ~~~~~~~~~ 375 (394)
T PRK03699 367 GLYAVVFVM 375 (394)
T ss_pred HHHHHHHHH
Confidence 877776544
No 178
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.01 E-value=1.5e-08 Score=115.33 Aligned_cols=164 Identities=19% Similarity=0.170 Sum_probs=118.0
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHH
Q 004754 519 ILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILIT 597 (732)
Q Consensus 519 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i 597 (732)
.+..-.+++++..++|.++.+.+ .+|++..+.+. +..++.+...++.+++|+++|| +|||++++.+..+..+
T Consensus 19 ~~~~~~~~~~~~~~L~~yl~~~~------~lg~s~~~ag~-~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 19 ELWERFSYYGMQGILAVYLVQQA------GLGFSQEQAFI-IFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC------CCCCCHHHHHH-HHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 33333456777888999987621 25566655554 4556788899999999999999 8999999999988888
Q ss_pred HHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccc---hhhHHHHHHHHHHHHHHHHHhHH
Q 004754 598 SLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRV---RGICIAICALVFWIGDIIVTYSL 673 (732)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~---r~~~~gi~~~~~~ig~~i~~~~~ 673 (732)
+.+++.+.. +.+..++..++ .+.+.+ ..+....+.++.+|++. |+.+.++.+...++|.+++|.+.
T Consensus 92 g~~~~~~~~--------~~~~~~~~~~l--~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 92 GHFMLAMSI--------YPDLIFYGLGT--IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHhcc--------cHhHHHHHHHH--HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 877666521 11122222222 233333 34555677789998754 88899999999999999999999
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHH
Q 004754 674 PVLLNSVGLAGVFGMYAVVCVISWIF 699 (732)
Q Consensus 674 ~~l~~~~g~~~~f~~~~~~~~i~~i~ 699 (732)
+++.+..||+..|.+.++.++++.+.
T Consensus 162 g~l~~~~g~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 162 GVIAENYGYHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999877666555433
No 179
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.00 E-value=4e-08 Score=110.38 Aligned_cols=168 Identities=18% Similarity=0.090 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh--CChHHH-HHHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPML-IVSSVLYFIGGL 88 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~-~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf--GrR~vL-ligllL~aIgsl 88 (732)
+..++.......+...+|.+. +++|+ +..+.+++.+++.++..++.+++|+++||+ |||... .+...+..++.+
T Consensus 260 l~~~~~~~~~~~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~ 337 (452)
T PRK11273 260 IANVFVYLLRYGILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI 337 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH
Confidence 333333333333445566554 45788 778889999999999999999999999999 555432 222233333333
Q ss_pred HHHh--hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHH-HHHHHHHHHhhccchhHH
Q 004754 89 VMLW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL-AYCMVFGMSLMTAPSWRL 165 (732)
Q Consensus 89 l~a~--a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aI-g~l~~l~~~l~~~~~Wr~ 165 (732)
+..+ ..+.+.++++.++.|.+..........+..|.+|++.||.++++.+....+|..+ + +.......+..||+.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g--~~v~g~l~~~~g~~~ 415 (452)
T PRK11273 338 VYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAA--SAIVGYTVDFFGWDG 415 (452)
T ss_pred HHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhh--hhhHHHHHHHhcchH
Confidence 2222 2344445555566665443333344456789999999999999998887777654 5 444455566678999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 004754 166 MLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l~~~~ 184 (732)
.|++.+..+++.+++.+++
T Consensus 416 ~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 416 GFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9998888777766555444
No 180
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.00 E-value=2.8e-08 Score=108.98 Aligned_cols=141 Identities=13% Similarity=0.239 Sum_probs=118.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~al 120 (732)
+....|++.++..+...++.++.|++.||+|+|+.+.++.++.++..++..+.++.+.+++.+++.|++.+........+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999888888887888899999999999999988777777788
Q ss_pred HHhcCCcchhhhhhhH-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 004754 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (732)
Q Consensus 121 I~E~fP~~~Rg~~~~l-~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~ 183 (732)
+.+..+++.++...+. .+....+|.+++ +.....+.+..||+.+|.+.+++.++...+..+
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~--~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFL--STLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHH--HHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 8888898888887766 578889999999 445555666679999999999988776665544
No 181
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=3.4e-08 Score=108.26 Aligned_cols=146 Identities=14% Similarity=0.102 Sum_probs=104.5
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++|.+..+.+. ...+..++..++.++.|+++||+|||++++.+..+..++.+.+.+.. +.+..++..++.+
T Consensus 35 ~~~~s~~~~g~-~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~l~G 105 (401)
T PRK11043 35 DLQTSASAVSA-SLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--------SAAQLLVLRFVQA 105 (401)
T ss_pred HHCCCHHHHHH-HHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHH
Confidence 34566655444 45567889999999999999999999999888777766665554420 1122222222222
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHh
Q 004754 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIK 703 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~ 703 (732)
.+.+ ...+....+..|.+|++.++...+..+....++..++|.+.+++.+..||+..|++.+++.++..+..+..
T Consensus 106 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 106 VGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred hhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 2222 12233446678999999899999999888999999999999999999999999998888887776555443
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.00 E-value=1.4e-08 Score=115.75 Aligned_cols=161 Identities=14% Similarity=0.116 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHhCCCCchhH---------HHH-HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 004754 25 IAGAVLYIKREFHLETEPTI---------EGL-IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~---------igl-l~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~ 94 (732)
+....|.+.++.|.+.+... ... ...+..++..++.+++++++||+|||++++++.++.+++.++.++..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33346777788887321100 011 23344456677888999999999999999988888777766555432
Q ss_pred h----HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc----------
Q 004754 95 N----VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA---------- 160 (732)
Q Consensus 95 s----~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~---------- 160 (732)
+ ...+.+.-+...++..+..+....+..|.+|.+.|+++.++.+....+|.++++... ....+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~ 464 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGF--LYLAQHGDPTKGYPTG 464 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHh--hhhhcccccccccccc
Confidence 1 111111111222222233456677789999999999999999999999999985443 333331
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 161 PSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.++...|++.++++++..++ ++++||+
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred ccchHHHHHHHHHHHHHHHH-heEeccC
Confidence 34566777777777765544 5678998
No 183
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.99 E-value=7.3e-09 Score=114.79 Aligned_cols=186 Identities=16% Similarity=0.175 Sum_probs=135.0
Q ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 004754 507 VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRT 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~ 586 (732)
++...+++.++.....+..=..++.-.|.+.++.| +|.++.+.+ .....+.--++-++.|.++||.+.|.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~---------lsk~~lG~i-~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGG---------LSKTQLGIL-GSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcC---------CCHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCce
Confidence 34445555554444333333455666677777654 444444444 45577888889999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHH
Q 004754 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGD 666 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~ 666 (732)
.+..++++..+..+++.++.. ..+..++..+-+.+-++++.|. .-.++.-+|++.||+..++-+.++++|+
T Consensus 96 fm~~gLilsai~nil~Gfs~s--------~~~~~~l~~lng~fQg~Gwpp~-~~~i~~Wfsr~eRG~~~siWn~shNiGG 166 (448)
T COG2271 96 FMAFGLILSAIVNILFGFSPS--------LFLFAVLWVLNGWFQGMGWPPC-ARTITHWFSRKERGTWWSIWNTSHNIGG 166 (448)
T ss_pred eehHHHHHHHHHHHHHhhhhH--------HHHHHHHHHHHHHHhcCCCcHH-HHHHHHHcCccccCceEEEehhhhhccc
Confidence 999999999998888888421 1122223333333445555444 4556899999999999999999999999
Q ss_pred HHHHhHH--HHHHHhhchhHHHHHHHHHHHHHHHHHHHhccC---CCCCC
Q 004754 667 IIVTYSL--PVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPE---TKGMP 711 (732)
Q Consensus 667 ~i~~~~~--~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~e---t~~~~ 711 (732)
.+.|.+. +++..+.+|+..|++-++++++..+++++.+++ +.|.+
T Consensus 167 al~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP 216 (448)
T COG2271 167 ALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP 216 (448)
T ss_pred chHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 9999999 899888899999999999999988888887754 44544
No 184
>PRK15075 citrate-proton symporter; Provisional
Probab=98.99 E-value=4.7e-08 Score=109.05 Aligned_cols=143 Identities=18% Similarity=0.140 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH-HH---h
Q 004754 18 QGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV-ML---W 92 (732)
Q Consensus 18 ~~~~~~~~~~~~~~I~-~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll-~a---~ 92 (732)
.......+....|.+. +.+|+ +..+.+++..++.++..++.+++|+++||+|||+++.++.++.++..+. .. .
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 327 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333334445566554 45898 7788888888899999999999999999999999888765544332221 11 1
Q ss_pred hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccchhH
Q 004754 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 93 a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~-~~~~G~aIg~l~~l~~~l~~~~~Wr 164 (732)
.+++..+.+..++.|++.+...+....++.|.+|++.|+...++... +..++..++ |.......+..|++
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~--p~~~g~i~~~~g~~ 398 (434)
T PRK15075 328 APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFT--PAISTWLIHVTGDK 398 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhH--HHHHHHHHHhcCCc
Confidence 23444455556667777777777777889999999999999998543 344445666 44444455555653
No 185
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.97 E-value=2e-08 Score=124.60 Aligned_cols=156 Identities=21% Similarity=0.216 Sum_probs=125.5
Q ss_pred HHHHHHHhCCCCchh-HHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 004754 29 VLYIKREFHLETEPT-IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (732)
Q Consensus 29 ~~~I~~dlgl~~s~s-~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G 107 (732)
.+++.+.+|+ +.. ..|++.++..++.+++++++|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|
T Consensus 256 ~~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 333 (1146)
T PRK08633 256 PAYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFG 333 (1146)
T ss_pred HHHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3456677898 777 8999999999999999999999999999999999998888888888888888888989999999
Q ss_pred HHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004754 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 108 ~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
++.++..+...+++.+.+|++.||.++++.++...+|.++++....... ....++...|++.+.++++..++.++++|+
T Consensus 334 ~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1146)
T PRK08633 334 FSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS-GLGLSPAGLFYLIALVTLIGTLYTLLLLPD 412 (1146)
T ss_pred HHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH-HhccCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999877744432222 123456667766666555544444444443
No 186
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=5.5e-08 Score=110.64 Aligned_cols=188 Identities=14% Similarity=0.041 Sum_probs=120.3
Q ss_pred hhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchh
Q 004754 507 VKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRT 586 (732)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~ 586 (732)
..++.+....+.+...+.....+....+.+-+. +++++.++.+.+.+ +..+...+..+..|++.||+|.|+
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~--------~~~ls~~q~g~l~a-i~~l~~al~rip~G~l~Dr~G~R~ 101 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKI--------GFNFTTDQLFLLTA-LPSVSGALLRVPYSFMVPIFGGRR 101 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--------hcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCChH
Confidence 344555555555555544333333333333331 46677776666655 567777788888999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHH
Q 004754 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGD 666 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~ 666 (732)
++..++.+..+..+.+.+.... ...+.+..++.-++.+. +.+..+.....+++.+|++.||++.|+....+.+|.
T Consensus 102 v~~~~~ll~~i~~~~~~~a~~~---~~~s~~~lli~r~l~Gi--gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~ 176 (462)
T PRK15034 102 WTVFSTAILIIPCVWLGIAVQN---PNTPFGIFIVIALLCGF--AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGV 176 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc---cCCCHHHHHHHHHHHHH--HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHH
Confidence 9988888877776655542110 00112222222222222 233445556778999999999999999988888888
Q ss_pred HHHHhHHHHHH-----H-------------hhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 667 IIVTYSLPVLL-----N-------------SVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 667 ~i~~~~~~~l~-----~-------------~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.+++++.+.+. . ..+++.++++++.+.++..++.++++++.+
T Consensus 177 ~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 177 SVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 87777776644 2 334677778888888877777777666543
No 187
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.96 E-value=7.4e-08 Score=105.45 Aligned_cols=145 Identities=12% Similarity=0.048 Sum_probs=117.6
Q ss_pred HHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 004754 28 AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (732)
Q Consensus 28 ~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G 107 (732)
.+|.+.++.|. +..+.|++.++..++..+..++.|++.||+|+|+++.++.++.+++.++..+.++.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 33444467898 8888999999999999999999999999999999999999999998888888999999999999999
Q ss_pred HHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004754 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 108 ~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
++.+...+....++.+. ++++++++.++.. ....+|..++ +...+.+.+..++ ..++..+++.++.+
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig--~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIM--TVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999999999998887 5666788888875 5567777888 4555666666677 46666666655433
No 188
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.96 E-value=3.3e-08 Score=114.18 Aligned_cols=155 Identities=18% Similarity=0.168 Sum_probs=132.9
Q ss_pred HHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 004754 23 ATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (732)
Q Consensus 23 ~~~~~~~~~I~-~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI 101 (732)
..+...+|.+. +.+|. +....|++.+++.+|.++++++.+++.+|+++++++..+.++++++.+..+++++.+..++
T Consensus 235 ~a~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~ 312 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALI 312 (524)
T ss_pred hHHHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 33445577665 56788 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 004754 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (732)
Q Consensus 102 ~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~ 181 (732)
+-++.|++.........+.+.+..|++.||++++++++....+..+|. ...+.+.+..|-+..+.+.++..++..++.
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGs--ll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGS--LLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999899999999999999999999999999999999984 445566677788888887776555544443
No 189
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.95 E-value=4.1e-08 Score=108.33 Aligned_cols=114 Identities=19% Similarity=0.320 Sum_probs=96.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHhhHhHHHHH
Q 004754 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-PNVYVLLLARLLDGFGIGLAVTLVPI 119 (732)
Q Consensus 41 s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a-~s~~~LiI~R~L~G~g~G~~~~~~~a 119 (732)
+....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.++..+. .+.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999999999988888887776665 35677778888999999999999999
Q ss_pred HHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 120 YISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 120 lI~E~fP-------~~~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
++.|..+ ++++|.+.++.++...+|..+++.....
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 5668999999999999999999544433
No 190
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.95 E-value=6.8e-08 Score=110.75 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHH
Q 004754 511 LMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLL 589 (732)
Q Consensus 511 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~ 589 (732)
+...+....+.. .+++.+..+++.++.+ .+|.+.++....... .........+++|++.|| +|||++++
T Consensus 23 ~~~~~~~~~~~~-~~~y~~~~~l~~yl~~--------~lg~s~~~a~~~~~~-~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 23 FYLIFSIELWER-FGYYGLQGIMAVYLVK--------QLGMSEADSITLFSS-FSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHH--------HcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 334343333333 3456677788888854 355655554444433 344444445689999999 59999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccc--hhhHHHHHHHHHHHHHH
Q 004754 590 STIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRV--RGICIAICALVFWIGDI 667 (732)
Q Consensus 590 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ig~~ 667 (732)
.+..+..++.+++.+.. .......+..++.+.+.+. ..+....+..|.+|++. |..+.++.+.+.++|.+
T Consensus 93 ~g~~~~~ig~~l~~~~~-------~~~~~l~~~~~l~gig~g~-~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 93 LGAIVLAIGYALVAWSG-------HDAGIVYMGMATIAVGNGL-FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred HHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHhhhc-ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 99888887766665421 0111122222233333222 34455577899998653 44678888999999999
Q ss_pred HHHhHHHHHHHhhchhHHHHHHHHHHHHHH
Q 004754 668 IVTYSLPVLLNSVGLAGVFGMYAVVCVISW 697 (732)
Q Consensus 668 i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~ 697 (732)
++|.+.+++.+..||+..|++.++..+++.
T Consensus 165 ~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 165 FSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999999999999999999998775544443
No 191
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.94 E-value=4.2e-08 Score=108.37 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....++...+.+...+..++.|++.||+|||++++.+..+..++.+.+.... . . ++..++. .......
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~---------~-~-~~~r~l~-G~~~a~~ 105 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI---------H-P-LLAYGLV-GIGAAAY 105 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH---------H-H-HHHHHHH-HHHHHHH
Confidence 3445556678889999999999999999999999999888877665543311 1 1 2222222 2222344
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.|....++.|++|++.|+++.|+.+....++.+++|.+.|++.+.. +...+++.+.+.+++ ++..+.+||.+
T Consensus 106 ~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~-~~~~~~l~~~~ 177 (393)
T PRK11195 106 SPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLA-ALFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHhcCCCCc
Confidence 5667788899999999999999999999999999999999999854 666665555544444 33445677654
No 192
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.91 E-value=6.3e-08 Score=110.86 Aligned_cols=168 Identities=16% Similarity=0.238 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchh
Q 004754 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRT 586 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~ 586 (732)
.+..++.++....-.+ +++++..+++.++.+ .+|.+.... ..+...+........+++|+++|| +|||+
T Consensus 13 p~~~~~~~~~~~~er~-~~y~~~~~l~~yl~~--------~lg~~~~~a-~~i~~~~~~~~~~~~~~~G~laDr~~G~r~ 82 (489)
T PRK10207 13 PRPFFMIFFVELWERF-GYYGVQGILAVFFVK--------QLGFSQEQA-FITFGAFAALVYGLISIGGYVGDHLLGTKR 82 (489)
T ss_pred ChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH--------HcCCCHHHH-HHHHHHHHHHHHHHHhhHHHhhhhccchHH
Confidence 4445554444444333 456666777777765 345555444 444445666666777899999999 99999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccc--hhhHHHHHHHHHH
Q 004754 587 LLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRV--RGICIAICALVFW 663 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ 663 (732)
+++.+..+..++.+.+.+... .....++...+ .+.+.+ ..+....++.|.+|++. |+.++++.....+
T Consensus 83 ~~~~g~~~~~~g~~~~~~~~~-------~~~ll~~~~~l--~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~n 153 (489)
T PRK10207 83 TIVLGAIVLAIGYFMTGMSLL-------KPDLIFIALGT--IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSIN 153 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-------chhHHHHHHHH--HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHH
Confidence 999999999888877765311 01111122222 223222 34555678899999874 4778999999999
Q ss_pred HHHHHHHhHHHHHHHhhchhHHHHHHHHHHH
Q 004754 664 IGDIIVTYSLPVLLNSVGLAGVFGMYAVVCV 694 (732)
Q Consensus 664 ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~ 694 (732)
+|.+++|.+.|++.+..||++.|++.++..+
T Consensus 154 ig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~ 184 (489)
T PRK10207 154 IGSLISLSLAPVIADKFGYSVTYNLCGAGLI 184 (489)
T ss_pred HHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Confidence 9999999999999999999999988654333
No 193
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.91 E-value=5.8e-08 Score=121.02 Aligned_cols=147 Identities=13% Similarity=0.032 Sum_probs=97.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....+...++.+..+++.+++|+++||+|||+++.....+.++...+..+.... +....++...+........+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~------~s~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL------NSVPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHHHHHHHHHHhh
Confidence 445555666778888999999999999999997644333222222222211110 11222222222223333345
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
.+....++.+++|++.|+.++|+.++...+|.+++|.+.|++....||+..|+..+++.++ .+++.+++|+++
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTG 198 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCC
Confidence 6777888899999999999999999999999999999999999999998888444444444 344455566654
No 194
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.90 E-value=1.5e-07 Score=107.68 Aligned_cols=166 Identities=21% Similarity=0.187 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCCh--HHHHHHHHHHHHHHHHHHh--
Q 004754 17 LQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW-- 92 (732)
Q Consensus 17 ~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR--~vLligllL~aIgsll~a~-- 92 (732)
.+++ ++.+.....+..+++|+ +..+...+.-+..+..+++++++|++.||+|.| ++++++++++.+..+...+
T Consensus 294 ~dg~-~ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~ 370 (477)
T PF11700_consen 294 SDGV-NTIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF 370 (477)
T ss_pred HHHH-HHHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 3444 35556667788889999 889998899999999999999999999999999 8999888888666555555
Q ss_pred ------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004754 93 ------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 93 ------a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~ 166 (732)
..+.+.+.+.-++.|++.|..++...++.++..|+.+.+...|++.+..-....+|++......... .+-|+.
T Consensus 371 ~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-g~~r~g 449 (477)
T PF11700_consen 371 WPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-GSQRYG 449 (477)
T ss_pred hhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhH
Confidence 5678889999999999999999999999999999999999999999999999999955443333322 247888
Q ss_pred HHHHHHHHHHHHHHHHhhccC
Q 004754 167 LGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 167 ~~i~~~l~~i~~~l~~~~~~e 187 (732)
+..+.++.++.+++ +++++.
T Consensus 450 ~~~l~~lf~~gl~l-l~~v~~ 469 (477)
T PF11700_consen 450 FLFLLVLFLIGLIL-LFFVDV 469 (477)
T ss_pred HHHHHHHHHHHHHH-Hhhccc
Confidence 88877777776654 355554
No 195
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.90 E-value=1.6e-07 Score=107.38 Aligned_cols=155 Identities=12% Similarity=0.126 Sum_probs=116.8
Q ss_pred HHHHHHHHhCCCCchhHHHHHH-HHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHH
Q 004754 28 AVLYIKREFHLETEPTIEGLIV-AMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLLA 102 (732)
Q Consensus 28 ~~~~I~~dlgl~~s~s~igll~-Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~---a~a-~s~~~LiI~ 102 (732)
..|++.+++|. +..+.+++. +...++.+++.+++|+++||+|+|+.+.++.++.+++.+++ +.. ++.+.+.+.
T Consensus 245 ~~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~ 322 (491)
T PRK11010 245 TTTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAA 322 (491)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHH
Confidence 44566778899 899999987 46678999999999999999999998877666555544332 222 355555556
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 004754 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 103 R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
-++..++.|...+...++..+..+++.++...++.+....+|.++++ ...+...+..||+..|.+.++++++.+++.
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~--~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~- 399 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVG--PVAGWFVEAHGWPTFYLFSVAAAVPGLLLL- 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHHHH-
Confidence 66766666766777788889999999999999999999999988774 345555666799999999888888865544
Q ss_pred hhccC
Q 004754 183 FYLPE 187 (732)
Q Consensus 183 ~~~~e 187 (732)
.++++
T Consensus 400 ~~~~~ 404 (491)
T PRK11010 400 LVCRQ 404 (491)
T ss_pred HHHHh
Confidence 33444
No 196
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.88 E-value=2.2e-08 Score=112.34 Aligned_cols=152 Identities=13% Similarity=0.037 Sum_probs=110.8
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+++++....+.+.+ .+.++.+++.+++|+++||+|||+.+..+..+..++.++..+.... ..+..++.-++.+
T Consensus 70 ~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILS-SHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGG------GIALVVFCRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHH-HHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHc------CchHHHHHHHHHH
Confidence 57788866665554 5789999999999999999999999988877766665554332110 1112122222222
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHHhccC
Q 004754 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS-VGLAGVFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~i~~~~~~~e 706 (732)
++. ....+....+.+|.+|++.|+++.++......+|.++++.+.+.+.+. .||+.+|.+.++.+++..++.+.+.++
T Consensus 143 ~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 143 LAQ-GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred Hhc-ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 222 233455667889999999999999999999999999999999999988 499999999888877766666555554
Q ss_pred C
Q 004754 707 T 707 (732)
Q Consensus 707 t 707 (732)
.
T Consensus 222 ~ 222 (465)
T TIGR00894 222 D 222 (465)
T ss_pred C
Confidence 3
No 197
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.87 E-value=2.9e-07 Score=102.72 Aligned_cols=157 Identities=15% Similarity=0.119 Sum_probs=96.4
Q ss_pred HHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH--h--hhhHHHHH
Q 004754 26 AGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML--W--SPNVYVLL 100 (732)
Q Consensus 26 ~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a--~--a~s~~~Li 100 (732)
...+|. +.+.+|. +..+.++..++..++..+++++.|+++||+|||+++.++.++.++..+... . ..+....+
T Consensus 263 ~~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 334454 5567888 788888888888888899999999999999999988776665443332221 1 12222222
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH-HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 101 I~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~-G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
..-++.+++.+...+....++.|++|++.|+.+.++.+....+ ..... +...........|...+++.++..++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~--p~~~~~l~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSA--EYVALSLKSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHH--HHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 2223333444444556778899999999999999997765443 22223 22222222222365666666665665544
Q ss_pred HHHhhccC
Q 004754 180 LTIFYLPE 187 (732)
Q Consensus 180 l~~~~~~e 187 (732)
.. +++++
T Consensus 419 ~~-~~l~~ 425 (432)
T PRK10406 419 VS-LMLHR 425 (432)
T ss_pred HH-HHhhh
Confidence 43 34443
No 198
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=2.6e-07 Score=92.01 Aligned_cols=164 Identities=26% Similarity=0.417 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch--hHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~--s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsl 88 (732)
.....+....+........+.+..+++. +. ...++..+.+.++..++.++.|.++||+|||+.+..+.....++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 84 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTLSL--SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTL 84 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHH
Confidence 3444555557777777788888888876 44 4789999999999999999999999999999888888876666667
Q ss_pred HHHhhhh--HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc-chhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccchhH
Q 004754 89 VMLWSPN--VYVLLLARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWR 164 (732)
Q Consensus 89 l~a~a~s--~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~-~~Rg~~~~l~~~-~~~~G~aIg~l~~l~~~l~~~~~Wr 164 (732)
++.+..+ .+.+++.|++.|++.+...+...+++.|++|. ++|+...++... ...+|.++++............+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T COG0477 85 LLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWR 164 (338)
T ss_pred HHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 7777666 89999999999999999999999999999998 678999888888 5778888885333222221346899
Q ss_pred HHHHHHHHHHHH
Q 004754 165 LMLGVLFIPSLI 176 (732)
Q Consensus 165 ~~~~i~~~l~~i 176 (732)
..|.+..+....
T Consensus 165 ~~~~~~~~~~~~ 176 (338)
T COG0477 165 AAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHH
Confidence 966655554443
No 199
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.85 E-value=2.5e-07 Score=101.38 Aligned_cols=148 Identities=11% Similarity=-0.062 Sum_probs=110.3
Q ss_pred HHHHHHHHhCCCCchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHH
Q 004754 28 AVLYIKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW------SPNVYVLL 100 (732)
Q Consensus 28 ~~~~I~~dlgl~~s~s~igll~Sif~I-G~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~------a~s~~~Li 100 (732)
..+.+.+|.|+ +..+.|++.....+ ...++.++.|++.||+|+|+++.++.++.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 34445566899 89999999887764 66677899999999999999988877665333332221 12334445
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCc-chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 101 I~R~L~G~g~G~~~~~~~alI~E~fP~-~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
...++.+++.|...+...+.+.+..++ +.++...++.+....+|..++ +.......+..||+..|.+.++++++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g--~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIA--SSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 555666777788888888888888776 889999999999999999999 55556666777999999888877666443
No 200
>TIGR00898 2A0119 cation transport protein.
Probab=98.84 E-value=1.1e-07 Score=107.53 Aligned_cols=135 Identities=24% Similarity=0.270 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004754 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNV--YVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 49 ~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~--~~LiI~R~L~G~g~G~~~~~~~alI~E~fP 126 (732)
..+..+..+++.++.+++.||+|||+++.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 334556677888899999999999999999999998888887776544 555566677778888888899999999999
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 127 PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 127 ~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.+.|+.++++.+....+|.++++.... . ...++...+.+.++.+++..++ .+++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY---L-GEKWLFLPLVLFGGLALLAGIL-TLFLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH---H-HHHHHhhHHHHHHHHHHHHHHH-HHcCcCC
Confidence 999999999999999999999954443 2 2345677777777777765544 5678887
No 201
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.83 E-value=5.3e-08 Score=113.55 Aligned_cols=153 Identities=20% Similarity=0.234 Sum_probs=107.9
Q ss_pred HhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhc
Q 004754 531 YYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKM 610 (732)
Q Consensus 531 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~ 610 (732)
.-++.+..++|-+ ....+++....+...++.++.|+++|.+|||..++.+..+..++.++......
T Consensus 65 ~~l~~I~~diG~~-----------~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~--- 130 (599)
T PF06609_consen 65 SILPYINADIGGS-----------DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQN--- 130 (599)
T ss_pred HHHHHHHHhcCCC-----------ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCc---
Confidence 3445566665533 23344556688889999999999999999999999999998888887765311
Q ss_pred ccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHH
Q 004754 611 GSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYA 690 (732)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~ 690 (732)
....+....+++.+.+ ...+....++|+.|.+.|..+.++.....-+...+++.+...+....+||+.|++++
T Consensus 131 -----~~~~iag~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~ 203 (599)
T PF06609_consen 131 -----MNTFIAGMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFI 203 (599)
T ss_pred -----HHHHHHHHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHH
Confidence 1233444455555443 333445567999999999988887776555555567777766666679999999998
Q ss_pred HHHHHHHHHHHHhc
Q 004754 691 VVCVISWIFVFIKV 704 (732)
Q Consensus 691 ~~~~i~~i~~~~~~ 704 (732)
+...++.+..+++.
T Consensus 204 i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 204 IWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHHHHHHHHh
Confidence 88877766655443
No 202
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.81 E-value=3.7e-06 Score=94.14 Aligned_cols=160 Identities=15% Similarity=0.182 Sum_probs=121.9
Q ss_pred HHHHHHHHH-hCCCCchhHH-HHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 004754 27 GAVLYIKRE-FHLETEPTIE-GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (732)
Q Consensus 27 ~~~~~I~~d-lgl~~s~s~i-gll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~ 104 (732)
...|++.+. .|+ +..++ .-+.-+..-.+....++...+.|..+.|++++++.+...+..++..+.++...+-+.-+
T Consensus 25 fl~~yL~~~~kn~--T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNF--TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCC--CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHH
Confidence 345666665 677 55554 23555566678888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004754 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 105 L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
..|++.+.. .+..+++--..|+++--++.+......-+|.+++.+.+-........+.+....+......+ ..+..++
T Consensus 103 ~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~-a~~~~~f 180 (412)
T PF01770_consen 103 FYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSL-ALLIALF 180 (412)
T ss_pred HHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence 999998775 77889999999999989999998888888888886555444444455666666555443333 3344577
Q ss_pred ccCCch
Q 004754 185 LPESPR 190 (732)
Q Consensus 185 ~~esp~ 190 (732)
+|..++
T Consensus 181 LP~~~~ 186 (412)
T PF01770_consen 181 LPMPKR 186 (412)
T ss_pred cCCCCc
Confidence 886543
No 203
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.79 E-value=3.3e-07 Score=102.30 Aligned_cols=161 Identities=12% Similarity=0.072 Sum_probs=110.3
Q ss_pred HHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhh
Q 004754 530 LYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIK 609 (732)
Q Consensus 530 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~ 609 (732)
....|.+.++ +|++..+.+ ++.....++.+++.++.+++.||+|||++++.+..++.++.+.+......
T Consensus 23 ~~l~~~~~~~---------~~~s~~~~g-~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~- 91 (410)
T TIGR00885 23 NPMVPQFQQA---------FTLTAFQAA-LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI- 91 (410)
T ss_pred HHHHHHHHHH---------hCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 3555666554 455555544 55567889999999999999999999999999998888887665432110
Q ss_pred cccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh----------
Q 004754 610 MGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS---------- 679 (732)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~---------- 679 (732)
.+.+..++..++.+++.+.. .+..+.+..++.|++.|+...++.+.+..+|..++|.+.+.+...
T Consensus 92 ----~~~~~~l~~~~l~G~g~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~ 166 (410)
T TIGR00885 92 ----MNYTLFLVGLFILTAGLGFL-ETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVL 166 (410)
T ss_pred ----ccHHHHHHHHHHHHhhHHHH-HhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhh
Confidence 01122222223333333322 233456677888999999999999999999999999999887532
Q ss_pred ----------------hchhHHHHHHHHHHHHHHHHHH-HhccC
Q 004754 680 ----------------VGLAGVFGMYAVVCVISWIFVF-IKVPE 706 (732)
Q Consensus 680 ----------------~g~~~~f~~~~~~~~i~~i~~~-~~~~e 706 (732)
.+|+.+|++.++++++..++.. ...|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 167 DKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3688899888887776654443 33454
No 204
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.78 E-value=6.2e-06 Score=90.47 Aligned_cols=153 Identities=20% Similarity=0.211 Sum_probs=105.7
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004754 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~ 110 (732)
.+-+++|+ +..+++.+....+...++..++.|.++||+|||+.-++.+++.+++++ +-..++++.++++|++.|++.
T Consensus 59 ~LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 59 ALYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHH
Confidence 34468999 899999999999999999999999999999999999999999998875 455689999999999999999
Q ss_pred hhHhHHHHHHHH-hc----CCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHH
Q 004754 111 GLAVTLVPIYIS-ET----APPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAP--SWRLMLGVLFIPSLIYFVLTI 182 (732)
Q Consensus 111 G~~~~~~~alI~-E~----fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~~--~Wr~~~~i~~~l~~i~~~l~~ 182 (732)
...+.+..+++. |. +|++..+...+... ...++-.+++.+..- ...+.. |-..+|....++.++..+++.
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~--~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVAN--VLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHH--HHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 999988877653 43 34444444333333 112222222222221 222222 336677776666665555544
Q ss_pred hhccCC
Q 004754 183 FYLPES 188 (732)
Q Consensus 183 ~~~~es 188 (732)
...+|.
T Consensus 214 ~~W~EN 219 (354)
T PF05631_consen 214 KTWPEN 219 (354)
T ss_pred hccccc
Confidence 444443
No 205
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.77 E-value=6.1e-07 Score=102.43 Aligned_cols=159 Identities=20% Similarity=0.167 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh---hHH----
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP---NVY---- 97 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~---s~~---- 97 (732)
+...-..+-++.|+ +..+.-++.....+...++++++.++.||+|||+.+++++.++.++.+++...- +..
T Consensus 289 i~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 289 IFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred eHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 33344568888899 888888899999999999999999999999999999999999988888776531 111
Q ss_pred --HHHHHHHHHHHHHhhH-hHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Q 004754 98 --VLLLARLLDGFGIGLA-VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (732)
Q Consensus 98 --~LiI~R~L~G~g~G~~-~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~ 174 (732)
..+++.++..++.+.. -|+..-+.+|.+|++.|..+.++..+...+..++- ........+..|= +.|.+..+++
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv--~~~fp~l~~~~g~-~~filF~i~~ 443 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV--GFAFPPLQNVIGP-YVFILFVIPL 443 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcc-hhhHHHHHHH
Confidence 2234444444443333 37778889999999999999999888887777775 2222333333333 7788888888
Q ss_pred HHHHHHHHhhccCC
Q 004754 175 LIYFVLTIFYLPES 188 (732)
Q Consensus 175 ~i~~~l~~~~~~es 188 (732)
++.++.+++++|||
T Consensus 444 ~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 444 AIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHhCccc
Confidence 88888999999999
No 206
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.77 E-value=2.1e-07 Score=100.29 Aligned_cols=117 Identities=15% Similarity=0.178 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHhCCCCchhHHHHHHHHHH-HHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh---------
Q 004754 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSL-IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--------- 93 (732)
Q Consensus 24 ~~~~~~~~I~~dlgl~~s~s~igll~Sif~-IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a--------- 93 (732)
.....+|.+.+++|. +..+.+.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+.
T Consensus 227 ~~~~~~~~~l~~~g~--~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (356)
T TIGR00901 227 AATVLTTLFLLDMGF--SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGI 304 (356)
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 334445555566888 8889988887655 6778999999999999999999998888887776665543
Q ss_pred --hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHH
Q 004754 94 --PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGC 142 (732)
Q Consensus 94 --~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~ 142 (732)
++.+.++++.++.+++.+...+...+++.|.+|+++||+..++.+...+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 305 TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4567788889999999999999999999999999999999999877654
No 207
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.77 E-value=3.9e-07 Score=95.97 Aligned_cols=143 Identities=17% Similarity=0.130 Sum_probs=117.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
+|+.++...+.....|. ...++..-|.+++.+|+ +.++...+.+...+|..+ +++.|.+.|++|++.++++|.+..
T Consensus 1 rW~~l~a~~~v~~~~Gt-~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGT-TYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLG 76 (250)
T ss_pred ChhhHHHHHHHHHhcCc-ccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHH
Confidence 46666666666665553 45566777899999999 999999999999999876 589999999999999999999999
Q ss_pred HHHHHHHHhh-------hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004754 84 FIGGLVMLWS-------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 84 aIgsll~a~a-------~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~ 151 (732)
.+|..+...+ +++|.+.+..++.|.+.+....+......+.|| ++||.+.++.-.+.+++.++-...
T Consensus 77 ~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 77 FVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred HHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHH
Confidence 9888776542 467888888888888887777777777788998 589999999999999998887433
No 208
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.76 E-value=2.8e-07 Score=102.45 Aligned_cols=181 Identities=20% Similarity=0.210 Sum_probs=145.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH
Q 004754 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL 82 (732)
+..++.++++-..+.+|.+ +.++....+-..++|+ +..+..++.....+..+++++++|++.||+|.|+++.+++++
T Consensus 251 ~~~i~~FLiA~~~~~DGv~-til~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVN-TILAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred ccchHHHHHHHHHHHhhHH-HHHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH
Confidence 4456667777667777765 5556666677779999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~ 162 (732)
..+.++...+...-..+.++-.+.|++.|+.+....++..+.+|+++-+..+|+++.+.-.+..+|++.......... +
T Consensus 328 ~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg-~ 406 (438)
T COG2270 328 LSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG-S 406 (438)
T ss_pred HHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc-c
Confidence 999888877777777778888999999999999999999999999999999999999999999999655544433333 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 163 Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
-|.-+....++-.+.++ .++.+|+.
T Consensus 407 ~r~g~~~i~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 407 SRAGVLSIIVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred hhhHHHHHHHHHHhhHh-hEEeecCC
Confidence 67666665555555443 34556643
No 209
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.76 E-value=2.2e-07 Score=103.03 Aligned_cols=149 Identities=17% Similarity=0.231 Sum_probs=120.4
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
++++|+.+..++.. +..+.+.+.+++.|++.||+|-|++...+..++++-++.+.+.... +.. ....++-..
T Consensus 43 ~~~LS~~q~~ll~a-iPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~------~~~-~~ll~~gll 114 (417)
T COG2223 43 DFGLSEGQKGLLVA-IPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTY------PST-WQLLVIGLL 114 (417)
T ss_pred ccCCCHHHHHHHHH-HHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccC------Cch-HHHHHHHHH
Confidence 67888877666654 5778888899999999999999999999988888888877764221 111 334444455
Q ss_pred HHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc---hhHHHHHHHHHHHHHHHHHHHhc
Q 004754 628 CCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG---LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g---~~~~f~~~~~~~~i~~i~~~~~~ 704 (732)
++++.+..++...++++.+|++.+|.+.|+.. .+++|..+...+.|.+....| |+.+..++....++..+..++.+
T Consensus 115 ~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~ 193 (417)
T COG2223 115 LGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGM 193 (417)
T ss_pred HhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555666666778899999999999999999 999999999999999999999 99999999999888888887776
Q ss_pred c
Q 004754 705 P 705 (732)
Q Consensus 705 ~ 705 (732)
.
T Consensus 194 ~ 194 (417)
T COG2223 194 N 194 (417)
T ss_pred C
Confidence 4
No 210
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.1e-08 Score=114.50 Aligned_cols=159 Identities=18% Similarity=0.128 Sum_probs=125.1
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH
Q 004754 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLY 626 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (732)
.-++++.. ...++..+..+...+++++.|++.||++|++++.+++.+-.++.++..+. .+.|..+++-.+.
T Consensus 61 ~~fni~~s-~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--------~~Fwq~~l~R~~v 131 (493)
T KOG1330|consen 61 TYFNISDS-ELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--------NHFWQVLLCRGFV 131 (493)
T ss_pred HhcCCCch-hccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--------HHHHHHHHHHHHh
Confidence 34566664 45556677889999999999999999999999999998888887776663 1333333333333
Q ss_pred HHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 004754 627 FCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG-LAGVFGMYAVVCVISWIFVFIKVP 705 (732)
Q Consensus 627 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g-~~~~f~~~~~~~~i~~i~~~~~~~ 705 (732)
+.+-. ...++...++++.+|...|++.+++.+++..+|.++|-.+...+.++.+ |++.|++.+++.+++.++++++++
T Consensus 132 GiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 132 GIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred ccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 33322 4567778889999999999999999999999999999988888888877 999999999999999999999888
Q ss_pred CCCCCChhhh
Q 004754 706 ETKGMPLEVI 715 (732)
Q Consensus 706 et~~~~~~~~ 715 (732)
|......|+.
T Consensus 211 eP~rga~~~~ 220 (493)
T KOG1330|consen 211 EPERGARDEV 220 (493)
T ss_pred Cccccccccc
Confidence 7765444433
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.73 E-value=4.5e-07 Score=101.65 Aligned_cols=172 Identities=13% Similarity=0.188 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh
Q 004754 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS 93 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a 93 (732)
..+-+.+|.+ +......+-++-+. +....|.+.++..+.-++...++.++.+|+|.|+.++++.+++++=.++++++
T Consensus 233 ~~~Y~vfdqq-f~~y~~~~f~~~~~--g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 233 AAIYDVFDQQ-FPIYFASFFQSAGQ--GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHTSSSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHH-HHHHHHHHhccccc--ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh
Confidence 3455666665 32222222122223 45678999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004754 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP-QFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 94 ~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~-~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
++.+.+.+.+.+.|+..+........++++.+|+|-..+...+. ++..++|.++. ....+...+..|.+.+|++++.
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~--s~~~G~lyd~~G~~~tylimg~ 387 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL--SPLAGYLYDRIGFQHTYLIMGL 387 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH--hhhHHhhHhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999998877766663 67778888887 5556777888899999999999
Q ss_pred HHHHHHHHHHhhccCCch
Q 004754 173 PSLIYFVLTIFYLPESPR 190 (732)
Q Consensus 173 l~~i~~~l~~~~~~esp~ 190 (732)
+.++..++.++.++..++
T Consensus 388 iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 388 IVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHheeeecCCCc
Confidence 988888888888876544
No 212
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.71 E-value=6.3e-07 Score=102.49 Aligned_cols=189 Identities=15% Similarity=0.102 Sum_probs=120.1
Q ss_pred hHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhh----cccc
Q 004754 509 RALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMD----ISGR 584 (732)
Q Consensus 509 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d----~~gr 584 (732)
++++....+....|++ +.....+++.+++..|.+ . ....++..+..+..++..++.|+++| |+||
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~---------~-~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GR 72 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGIP---------H-AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGR 72 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCC---------H-HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCC
Confidence 3444455555555654 445566777788776544 4 45555556778999999999999999 5999
Q ss_pred hhHHHhh-HHHHHHHHHHHHHHHHhh----c--ccchhhH---HHHHHHHHHHHHHhhcccchhhhhhccCCCccch--h
Q 004754 585 RTLLLST-IPILITSLVVLVLSSVIK----M--GSVVHAS---ISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVR--G 652 (732)
Q Consensus 585 r~~~~~~-~~~~~i~~~~~~~~~~~~----~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~ 652 (732)
|+.++.. .+...++++++....... . ......+ ..++.+.+..++..+...| ..++++|++|++.| +
T Consensus 73 Rrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p-~rALiaDl~p~~~~~~~ 151 (477)
T TIGR01301 73 RRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGP-CRAFLADLTGGDARRTR 151 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccccCchhHHHH
Confidence 9987764 444444444444321100 0 0000111 1111222222233322233 35788999999866 5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHH--HHhh-------------chhHHHHHHHHHHHHHHHHHHHhccCCCC
Q 004754 653 ICIAICALVFWIGDIIVTYSLPVL--LNSV-------------GLAGVFGMYAVVCVISWIFVFIKVPETKG 709 (732)
Q Consensus 653 ~~~gi~~~~~~ig~~i~~~~~~~l--~~~~-------------g~~~~f~~~~~~~~i~~i~~~~~~~et~~ 709 (732)
.+.++.+....+|+++++.+.+.. .+.. +.+.+|.+-+++.+++.++..+.++|..-
T Consensus 152 ~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 152 IANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 799999999999999999888864 2221 56778988888888988888888888653
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.70 E-value=1.3e-06 Score=98.39 Aligned_cols=136 Identities=12% Similarity=0.031 Sum_probs=92.5
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.+....+.|.+-++ +|++..+. .+....+.++..++.++.|+++||+|||++++.+..+..++.+++...
T Consensus 42 ~~~~~~~~p~i~~~---------~~~s~~~~-gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~ 111 (438)
T PRK10133 42 NNLNDILLPQFQQA---------FTLTNFQA-GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA 111 (438)
T ss_pred HHHHHHHHHHHHHH---------hCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677776544 45666444 445557889999999999999999999999999998888888765321
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 004754 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL 677 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~ 677 (732)
.. ..+.+..++..++.+++.+.. .+..+.+..|..|.+.|....++.+.+..+|..+++.+.+.+.
T Consensus 112 ~~-----a~~~~~ll~~r~l~G~g~g~~-~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 112 AE-----IMNYTLFLVGLFIIAAGLGCL-ETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred Hh-----cCCHHHHHHHHHHHHHHHHHH-HhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 011223333334444444432 2334455678777776666899999999999999998877654
No 214
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.69 E-value=1.5e-07 Score=107.56 Aligned_cols=141 Identities=16% Similarity=0.200 Sum_probs=110.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
....+...++.++.++|.++.|.++||+|||++++.+..+.+++.++.++. .....+...=++.+.+..+.
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a---------~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA---------PNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh---------CcHHHHHHHHHHHHhhccch
Confidence 344455667889999999999999999999999999999888888666663 12233333333344444456
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
..+.++++.|+++++.|+.+..+ ..+.+.++.+++...+++.. +|++.+++....+++..++ +++.||++
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 66778899999999999999999 89999999999999999887 8999999988888877665 55555764
No 215
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.68 E-value=2.3e-06 Score=94.38 Aligned_cols=144 Identities=17% Similarity=0.162 Sum_probs=102.7
Q ss_pred HHHHHHHhCCCCchhHHHHHHHHH-HHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH
Q 004754 29 VLYIKREFHLETEPTIEGLIVAMS-LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLLAR 103 (732)
Q Consensus 29 ~~~I~~dlgl~~s~s~igll~Sif-~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~---a~a-~s~~~LiI~R 103 (732)
.+.+.+++|+ +..+.|++.+.. .++..++.+++|++.||+|+|+.+.++.++.+++.+.. ++. ++.+.++++-
T Consensus 233 ~~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 233 TTFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 3567777899 889999988665 45688999999999999999998887777666554433 333 3455555444
Q ss_pred ----HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 104 ----LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 104 ----~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
++.|++.+..++....++.+.+|.+.++ +.+...++|.+++. .....+.+..||+.+|.+.++++++.++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~--~~~G~l~~~~G~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVG--PTSGYLVEAYGWPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 4566667777888888888888876654 34444456665552 3455666778999999999888877654
Q ss_pred H
Q 004754 180 L 180 (732)
Q Consensus 180 l 180 (732)
+
T Consensus 385 ~ 385 (402)
T PRK11902 385 L 385 (402)
T ss_pred H
Confidence 4
No 216
>PRK09848 glucuronide transporter; Provisional
Probab=98.67 E-value=1.7e-06 Score=96.88 Aligned_cols=127 Identities=19% Similarity=0.297 Sum_probs=98.2
Q ss_pred HHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHH
Q 004754 26 AGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLA 102 (732)
Q Consensus 26 ~~~~~~I~~-dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~--s~~~LiI~ 102 (732)
....|++.+ .+|. +....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++.
T Consensus 248 ~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 248 SASSLFYVRYVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred hhhheeeEeeecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 334454433 4565 444444545555677888999999999999999999999998888877776643 56777777
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcCCcc-------hhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 103 RLLDGFGIGLAVTLVPIYISETAPPE-------IRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 103 R~L~G~g~G~~~~~~~alI~E~fP~~-------~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
.++.|+|.+...+...+++.|..|.+ ++|...++.++...+|..++......
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999988754 45999999999999999998555433
No 217
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.63 E-value=2.8e-06 Score=91.57 Aligned_cols=137 Identities=11% Similarity=0.027 Sum_probs=105.7
Q ss_pred HHHHHH--HhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 004754 29 VLYIKR--EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLD 106 (732)
Q Consensus 29 ~~~I~~--dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~ 106 (732)
..++.+ .+|+ ++.+.++..+.+..+..++.++.+++.||+|+|+++.++.++.+++.++....++... ..+-++.
T Consensus 164 ~~yl~~~~~~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~ 240 (310)
T TIGR01272 164 VNFLSDPHALGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLAL 240 (310)
T ss_pred HHHHHhcccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHH
Confidence 344443 2588 8899999999999999999999999999999999998888888877766655544332 3456689
Q ss_pred HHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 004754 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (732)
Q Consensus 107 G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~ 172 (732)
|++.+..+|...+...+.+|++ .+.+.++. ....+|.++. |.......+..|.+..|++..+
T Consensus 241 g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~--P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 241 GLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIV--PLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHH--HHHHHHHHHhccchHHHHHHHH
Confidence 9999999999999999988854 56677775 5666888888 5555666666788888774443
No 218
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.63 E-value=1.5e-06 Score=93.68 Aligned_cols=131 Identities=20% Similarity=0.198 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 004754 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (732)
Q Consensus 24 ~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aIgsll~a~a~s~~~LiI~ 102 (732)
.+...+|.+.+++|. +..+.+++.+++.++.++++++.|++.||+ +||+.+.++.++.+++.+++.+.++...+. .
T Consensus 215 ~~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 291 (355)
T TIGR00896 215 SLIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-W 291 (355)
T ss_pred HHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-H
Confidence 334456777777888 889999999999999999999999999999 566677788788888777777665543332 4
Q ss_pred HHHHHHHHhhHhHHHHHHHHhcC-CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 004754 103 RLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (732)
Q Consensus 103 R~L~G~g~G~~~~~~~alI~E~f-P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~ 159 (732)
-++.|++.|..++...+.+.+.. ++++++...++.+....+|.+++ +.....+.+
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g--p~~~G~l~~ 347 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALG--PLFVGVLHD 347 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 57889999999988877776555 45677889999888888888888 444444433
No 219
>PTZ00207 hypothetical protein; Provisional
Probab=98.60 E-value=2.5e-06 Score=99.87 Aligned_cols=164 Identities=11% Similarity=0.114 Sum_probs=104.9
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
.+.+..+.|.+-++.| ++..+.+.+.. +.... ..+.+++|++.||+|+|++++++..+..++.+++.+.
T Consensus 43 ~y~fsv~s~~L~~~lg---------ls~~~l~~i~s-vg~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 43 MYAFNLISGAMQARYN---------LTQRDLSTITT-VGIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHHHHhC---------cCHHHHHHHHH-HHHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777787766654 44445444443 22222 2355678999999999999999999999988877764
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhH
Q 004754 606 SVIKMGSVVHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
..... ... ...+++.....+++.+ +.+.....+.+.|| +.||.+.|+......+|+++.+.+...++. .+++.
T Consensus 112 ~~~~i---~~s-~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~ 185 (591)
T PTZ00207 112 FQEVI---EGS-VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSA 185 (591)
T ss_pred hcccc---cCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHH
Confidence 22110 011 1222222222222222 22333456678887 679999999999999999876665555554 35777
Q ss_pred HHHHHHHHHHHHHHHHHHhccC
Q 004754 685 VFGMYAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~~~~e 706 (732)
.|++.+++.++..++.+.+++.
T Consensus 186 ~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 186 YFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHHHHHHHHhheeC
Confidence 8888888888777776666643
No 220
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.59 E-value=6.5e-07 Score=105.78 Aligned_cols=161 Identities=14% Similarity=0.036 Sum_probs=110.0
Q ss_pred hcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhh----c-----------
Q 004754 546 LSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIK----M----------- 610 (732)
Q Consensus 546 ~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~----~----------- 610 (732)
.+++++++++.+.+ ...+.++.+++.++.+++.||.|||+++..+.+++.++.+++++..+.. .
T Consensus 60 ek~F~lss~~~G~i-~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 60 ERRFKLSTSSSGLI-NGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred hhhhCCCCCcceee-eehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 34677887665544 5568899999999999999999999999999999999988876642110 0
Q ss_pred ------c--c---------------c-h--hhHHHHHHHHHHHHHHhh-cccchhhhhhccCCCccchhhHHHHHHHHHH
Q 004754 611 ------G--S---------------V-V--HASISTVSVVLYFCCFVM-GFGPIPNILCSEIFPTRVRGICIAICALVFW 663 (732)
Q Consensus 611 ------~--~---------------~-~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ 663 (732)
. . . . .....++.+.-+..+++. ...++...++.|.+|++.|+.+.|+.+....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 0 0 0 0 001111111112222222 2345566888999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHhh---------------------c-hhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 664 IGDIIVTYSLPVLLNSV---------------------G-LAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 664 ig~~i~~~~~~~l~~~~---------------------g-~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
+|..+++.+.+++.+.. | |+..|++.+++.++..+. ++++|++.
T Consensus 219 iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~-l~~~p~~l 284 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP-FFFFPKAL 284 (633)
T ss_pred hhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-HHhCcccc
Confidence 99999999999988643 1 555677777766665544 44566543
No 221
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.56 E-value=4.3e-06 Score=94.87 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh-----hhhHH
Q 004754 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-----SPNVY 97 (732)
Q Consensus 23 ~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~-----a~s~~ 97 (732)
.......+++.+.... +....+++.++..++.+++.+++++++||+|+|+++.++.++.+++.+...+ ..+.+
T Consensus 248 ~~~~~~~~y~~~y~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 248 NIINGFAIYYFTYVIG--DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHhhheeeEEEEECC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3334444555555443 4567778888777889999999999999999999999888776666555432 34566
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 98 VLLLARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 98 ~LiI~R~L~G~g~G~~~~~~~alI~E~fP-------~~~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
.+++.-++.|++.+...+...+++.|..+ .+..|...++..+..-+|..+++.....
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777889999999999999999999966 3445778899888888888888554433
No 222
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.56 E-value=2.5e-06 Score=97.94 Aligned_cols=140 Identities=23% Similarity=0.267 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccch
Q 004754 558 LLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPI 637 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (732)
.++.....++.+++.+++|+++|++|||+.++.+.+...++.++..+.. +....++.-++.+++.+... .+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------~~~~l~~GR~l~G~g~G~~~-~~ 162 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------SWYQLIVGRILTGLGVGGAS-VL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHhccchhhhh-hc
Confidence 4556678899999999999999999999999999999999998888743 12233344444444444333 34
Q ss_pred hhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh--chhHHHHHHHHHHHHHHHHHHHhccCCC
Q 004754 638 PNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV--GLAGVFGMYAVVCVISWIFVFIKVPETK 708 (732)
Q Consensus 638 ~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~--g~~~~f~~~~~~~~i~~i~~~~~~~et~ 708 (732)
..++.+|+.|++.||...++.++...+|..++ ++.+...... +|+..+++..+.+++..+. ++++||+.
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 45889999999999999999999988776666 7777777654 8998888888877777766 77888763
No 223
>PRK09669 putative symporter YagG; Provisional
Probab=98.54 E-value=5e-06 Score=93.19 Aligned_cols=127 Identities=19% Similarity=0.235 Sum_probs=92.2
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHH
Q 004754 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW--SPNVYVLLLAR 103 (732)
Q Consensus 26 ~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~--a~s~~~LiI~R 103 (732)
+...+++.++.-. +....+.+.....+..+++.+++++++||+|+|+.+.++.++.+++.+...+ ..+.+.+++..
T Consensus 249 ~~~~~y~~~~~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T PRK09669 249 GGATLYYVNYVLL--RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALN 326 (444)
T ss_pred hhhhheeeeeecC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 3344454444322 3445556666777888889999999999999999999887766654443332 34677788888
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 104 LLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 104 ~L~G~g~G~~~~~~~alI~E~fP-------~~~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
++.|++.+...+...++++|..+ .+..|...++......+|..+++.....
T Consensus 327 ~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 327 ILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999886 2334667788888888888888554433
No 224
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.54 E-value=4.1e-07 Score=99.83 Aligned_cols=145 Identities=18% Similarity=0.094 Sum_probs=103.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcc
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGF 634 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (732)
..+.++...+.+..++.++..|.++||+|||.+++.+++...++.+..+.+-. ...++..=+.+.++. +.
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~---------F~afv~aR~l~Gi~k-gn 137 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN---------FAAFVLARFLGGIFK-GN 137 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHhhhhcc-Cc
Confidence 56677777889999999999999999999999999999888887777766321 111111112222232 34
Q ss_pred cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH---hhchhHHHHHHHHHH---HHHHHHHHHhccCCC
Q 004754 635 GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN---SVGLAGVFGMYAVVC---VISWIFVFIKVPETK 708 (732)
Q Consensus 635 ~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~---~~g~~~~f~~~~~~~---~i~~i~~~~~~~et~ 708 (732)
-.+..++++|+++++.|+.+++..+..+.+|-++||.+.|++.. ..|..+.++....++ .....++..++|||-
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 45566888999999999999999999999999999999999987 344333333122222 222344566789984
Q ss_pred C
Q 004754 709 G 709 (732)
Q Consensus 709 ~ 709 (732)
.
T Consensus 218 ~ 218 (451)
T KOG2615|consen 218 P 218 (451)
T ss_pred c
Confidence 3
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.1e-06 Score=101.35 Aligned_cols=168 Identities=14% Similarity=0.116 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC--ChHHHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--RRPMLIVSSVLYFIG 86 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG--rR~vLligllL~aIg 86 (732)
+..+++..+...........+|...++.+. +..+...+.++..+...++.++.|+++|+.. ++.++.+++++.+++
T Consensus 301 l~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 301 LLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 344555556666666666778888999999 8899999999999999999999999999998 556777888888888
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-hHH
Q 004754 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS-WRL 165 (732)
Q Consensus 87 sll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~-Wr~ 165 (732)
.+.++++++++.++....+.|++.|.........+.|..+.++-..+.|+..++.+++..+| +++.....+..+ |..
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g--pPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVG--PPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcC--cccceeeeeccCCeee
Confidence 88999999999999999999999999999999999999999999999999999999999999 565566666555 999
Q ss_pred HHHHHHHHHHHHHHH
Q 004754 166 MLGVLFIPSLIYFVL 180 (732)
Q Consensus 166 ~~~i~~~l~~i~~~l 180 (732)
.|...++..++..++
T Consensus 457 ~f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVL 471 (509)
T ss_pred ehhhcChHHHHHHHH
Confidence 999988877776544
No 226
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.50 E-value=6.7e-06 Score=93.64 Aligned_cols=159 Identities=13% Similarity=0.153 Sum_probs=112.8
Q ss_pred HHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHH
Q 004754 528 GVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 528 ~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~ 607 (732)
...+-.|.+.++ +|++..+....+..+...+-++..+++|++.||+|-|+++..+.+...+..+++.+..
T Consensus 44 n~s~a~p~L~~e---------lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~- 113 (511)
T TIGR00806 44 GESFITPYLLTV---------LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT- 113 (511)
T ss_pred hHHHHHHHHHHH---------cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-
Confidence 344555655554 4566666244555678899999999999999999999999988888877777776631
Q ss_pred hhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHH
Q 004754 608 IKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFG 687 (732)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~ 687 (732)
......+.-++++.+-+..+ ..+.++...+|++.|+++.|+++....+|.++++++.++ +...||+..+-
T Consensus 114 -------Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~ 183 (511)
T TIGR00806 114 -------SVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYST 183 (511)
T ss_pred -------HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHH
Confidence 11233344455555555444 556777899999999999999999999999999999999 55678876554
Q ss_pred H--HHHHHHHHHHHHHHhccC
Q 004754 688 M--YAVVCVISWIFVFIKVPE 706 (732)
Q Consensus 688 ~--~~~~~~i~~i~~~~~~~e 706 (732)
+ +...+.+..++..+++|.
T Consensus 184 Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 184 LNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCC
Confidence 3 233334444445556773
No 227
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.50 E-value=1.2e-05 Score=90.16 Aligned_cols=172 Identities=20% Similarity=0.256 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLYIKREFH-LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~dlg-l~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a 91 (732)
+..++.+...+.+....+...++.| . +....|.+.++..++=++.-.+.+++..|+|.|+++.++.+..++=..+++
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~gg~--~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELGGY--SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555655666666677777 6 566778888888888888999999999999999999999999999888888
Q ss_pred hh-hhHHHHHH----HHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHH-HHHHHHHHHHHHHHHHHhhccc----
Q 004754 92 WS-PNVYVLLL----ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAP---- 161 (732)
Q Consensus 92 ~a-~s~~~LiI----~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~-~~~~G~aIg~l~~l~~~l~~~~---- 161 (732)
+. ++.+...+ ...+.|+..|..+.+...++.+.+|++.|+.+.++++. ..++|.++|.+... .+.+..
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG--~l~~~~g~~~ 369 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG--WLYDAFGARG 369 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH--HHHHHhcchh
Confidence 77 45444333 34579999999999999999999999999999999875 46899999955544 333333
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 162 --SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 162 --~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
.|...+.+.+.+.++..++.+++.+|+
T Consensus 370 ~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 370 MFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 456667777776666666655666654
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.50 E-value=6.1e-07 Score=102.05 Aligned_cols=158 Identities=11% Similarity=0.164 Sum_probs=113.7
Q ss_pred hHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 526 INGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 526 ~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
...+.+|+--.+++.+.. ..-+| ..+.+.-.+-++.-+.++++++|+|+-+++..++++..+=++.+...
T Consensus 387 ~~lv~tFLfWHled~~~~--~~LfG--------v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L 456 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGI--KTLFG--------VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL 456 (618)
T ss_pred HHHHHHHHHHHHhhcCCc--ceeee--------ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh
Confidence 344556666667776522 12233 33344556667777888999999999999988887776666655442
Q ss_pred HHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHH-HHHHHHHHhHHHHHHHhhchhH
Q 004754 606 SVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVF-WIGDIIVTYSLPVLLNSVGLAG 684 (732)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~-~ig~~i~~~~~~~l~~~~g~~~ 684 (732)
.+.|..+..-++-+..++..+..+. .|++.+.||+.|+++.|+....+ .+|--+|.+++|.+++.+|.+.
T Consensus 457 --------~n~W~vLPieilqgit~aliWaa~~-sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~t 527 (618)
T KOG3762|consen 457 --------QNPWMVLPIEILQGITHALIWAAII-SYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGART 527 (618)
T ss_pred --------cCchheeeHHHHHHHHHHHHHHHHH-HHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHH
Confidence 1345555555555666665555444 67899999999999999988664 7799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004754 685 VFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~ 702 (732)
.|.++++.|++..++...
T Consensus 528 tf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 528 TFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999998877665443
No 229
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.48 E-value=4.4e-06 Score=93.18 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 11 AAIGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~I~~d-lgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
+.+..++............+++.++ ++. +...+++..+..++..++.+++++++||+|+|+++.++.++.+++.++
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 3444555555555666666766665 454 467788888999999999999999999999999999999999999999
Q ss_pred HHhhh--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc-------chhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 90 MLWSP--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 90 ~a~a~--s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~-------~~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
..+.+ +.+.+++.-++.|++.+..++...++++|..+. ++.|...++..+..-+|..++......
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~ 380 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGL 380 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHH
Confidence 88876 999999999999999999999999999999873 445889999999888888888654443
No 230
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.48 E-value=3e-06 Score=96.84 Aligned_cols=152 Identities=20% Similarity=0.154 Sum_probs=123.6
Q ss_pred hcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHH
Q 004754 546 LSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVL 625 (732)
Q Consensus 546 ~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (732)
...++.++.+.+.+++. ...+.+++.+.++++.||+|-|+++..+..+..++.+++.+..... .+..++.-++
T Consensus 65 ~~~~~ws~~~k~~i~ss-~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~------~~~~~~~R~l 137 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSS-FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG------FYLLLVLRFL 137 (466)
T ss_pred CceecCCHHHHHHHHHH-HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc------chhhHHHHHH
Confidence 35788999888888776 6799999999999999999999999999988888888887754422 2333444455
Q ss_pred HHHHHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHh-hchhHHHHHHHHHHHHHHHHHHHhc
Q 004754 626 YFCCFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNS-VGLAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~-~g~~~~f~~~~~~~~i~~i~~~~~~ 704 (732)
-+.+.+..+ |....+++.-.|+..|++..++.....++|.++.-++.|.+.++ .||+.+|.++++++++..++.+.+.
T Consensus 138 qGl~~g~~~-pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~ 216 (466)
T KOG2532|consen 138 QGLGQGVLF-PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFY 216 (466)
T ss_pred hHHHHhHHH-hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 555555444 44456779999999999999999999999999999999999998 9999999999999988877766665
Q ss_pred c
Q 004754 705 P 705 (732)
Q Consensus 705 ~ 705 (732)
.
T Consensus 217 ~ 217 (466)
T KOG2532|consen 217 S 217 (466)
T ss_pred c
Confidence 4
No 231
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=0.00013 Score=82.98 Aligned_cols=105 Identities=22% Similarity=0.231 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc
Q 004754 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE 128 (732)
Q Consensus 49 ~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~ 128 (732)
.++......+++++.+.+.|+.|.|..++++.....+..+.+.+ +|-+.+++.-.+.|+|.+..+..--.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66777788899999999999999999999999988887666554 46777888999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHH
Q 004754 129 IRGLLNTLPQFTGCVGMFLAYCMVFG 154 (732)
Q Consensus 129 ~Rg~~~~l~~~~~~~G~aIg~l~~l~ 154 (732)
.+.+..++.-...+.+.++|.+....
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999999888888888888554433
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.41 E-value=8.6e-07 Score=97.87 Aligned_cols=147 Identities=15% Similarity=0.147 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhccc
Q 004754 556 ASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFG 635 (732)
Q Consensus 556 ~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (732)
...++.....+..++.+++.|.++||+|+|..++.++.++..+.+++.+.-. .+..++.-.+=+.+......
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s--------y~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS--------YPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch--------hHHHHHHHHHhhhhHHHHHh
Confidence 3444456688999999999999999999999999999999998888877311 11223333333333332222
Q ss_pred chhhhhhccCCCccc-hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004754 636 PIPNILCSEIFPTRV-RGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 636 ~~~~~~~~e~~p~~~-r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~~ 711 (732)
....+.++.+|.+. |+.++|+.-.+..+|.+++|.+.|.+.+..|...+|+++++++++...+.++.++.++..+
T Consensus 179 -sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 179 -SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred -hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 22356789999877 5999999999999999999999999999999999999999999999998888887766544
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.22 E-value=0.024 Score=65.28 Aligned_cols=145 Identities=6% Similarity=0.035 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CchhHHHHHHHHHHHHHHHH-HHhHHHhhhhhCChHHHHHHHHH
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE---TEPTIEGLIVAMSLIGATCI-TTCSGAIADWLGRRPMLIVSSVL 82 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~---~s~s~igll~Sif~IG~~Ig-~~~~g~LsDrfGrR~vLligllL 82 (732)
-.+.+++..++..+.... +-.+.+.+..+ .....+.++.+...+..++. .++.+++++|++|++++.+....
T Consensus 8 k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 344444555555554333 45567776552 13457888888777766666 89999999999999998887777
Q ss_pred HHHHHHHHHhh--h-----------------------------hHHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchh
Q 004754 83 YFIGGLVMLWS--P-----------------------------NVYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIR 130 (732)
Q Consensus 83 ~aIgsll~a~a--~-----------------------------s~~~LiI~R~L~G~g~G~~~~-~~~alI~E~fP~~~R 130 (732)
+.+..+++++. | +.|...+.-+..-+....... ....++.|.++.++-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 77766666543 1 122333333444444445554 778899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 131 GLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 131 g~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
.+..++...+.++|.++++......
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999996554443
No 234
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.22 E-value=0.0092 Score=67.88 Aligned_cols=159 Identities=15% Similarity=0.038 Sum_probs=93.6
Q ss_pred CChhhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHh
Q 004754 497 FSWKDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAM 576 (732)
Q Consensus 497 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g 576 (732)
..|+..++.+...+.+-..++++. .++ +...+..|+...|+ ++.. ...+-++..+.++.|+++..
T Consensus 250 ~~w~~Y~~q~vflas~alalLY~T-VLs----f~~lmt~yl~~~G~---------s~~~-igi~R~~gav~Gl~gT~~~p 314 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALLYFT-VLS----FGGLMTAYLKSQGY---------SPSV-IGIFRGLGAVFGLLGTWVYP 314 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHHHHH-Hhc----CcHHHHHHHHHCCC---------CHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 466777766555555544444443 221 23344555555454 4433 34445567888999999999
Q ss_pred hhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhh-cccchhhhhhccCCCccchhhHH
Q 004754 577 RLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVM-GFGPIPNILCSEIFPTRVRGICI 655 (732)
Q Consensus 577 ~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~p~~~r~~~~ 655 (732)
++.+|+|..+.=+.++..-.+++.......+............+....+...=+|. ++-....-+..|..|++.|++..
T Consensus 315 ~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~ 394 (432)
T PF06963_consen 315 WLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVS 394 (432)
T ss_pred HHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHH
Confidence 99999998888777777666666655554443321100111111111111111121 22223345668999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 004754 656 AICALVFWIGDIIVT 670 (732)
Q Consensus 656 gi~~~~~~ig~~i~~ 670 (732)
|+-+...++...+.-
T Consensus 395 gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 395 GVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888776653
No 235
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.20 E-value=0.0027 Score=71.41 Aligned_cols=134 Identities=15% Similarity=0.159 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc
Q 004754 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (732)
Q Consensus 48 l~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~ 127 (732)
+.-+-.+-..+.-+++.+..+|+.-+.=..+..++++++.++.+++++.+.=+++-.+.+++.|........+.. .+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 444444556666777888899988655556666788888899899999999999999999999998888877644 5653
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccC
Q 004754 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (732)
Q Consensus 128 ~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~e 187 (732)
...+-+..+.+.+.++|++.-..... ...+-|..+.+...+.++..+..++.+|.
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 24566777778788887544433332 22344777777777666655444444543
No 236
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.15 E-value=1.2e-05 Score=88.32 Aligned_cols=180 Identities=15% Similarity=0.082 Sum_probs=115.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------------C-c--hhHHHHHHHHHHHHHHHHHHhH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE---------------T-E--PTIEGLIVAMSLIGATCITTCS 63 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~---------------~-s--~s~igll~Sif~IG~~Ig~~~~ 63 (732)
|+..+.++.+++++.+..+....+..-+-..-...++. . + +-.-.++ ..+.-..|.++.
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdlli---tslaefPGlLIt 401 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLI---TSLAEFPGLLIT 401 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHH---HHHhhCCchhHH
Confidence 45667788888888888877655543332222211110 0 0 0111222 233456788899
Q ss_pred HHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHH
Q 004754 64 GAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV 143 (732)
Q Consensus 64 g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~ 143 (732)
+++.||+|||+.+.+.+++++++.++...+.+--...+.-|..-++..+.+.+.++|..|.+|..-|+...|.-+...-+
T Consensus 402 ~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI 481 (528)
T KOG0253|consen 402 GVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI 481 (528)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhh
Confidence 99999999999999999999999988877644333333333333444555677788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCC
Q 004754 144 GMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (732)
Q Consensus 144 G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~es 188 (732)
|.++.++++ . ....+-..+..+.+.++++..++..++=-|+
T Consensus 482 ggI~~p~iA--~--~~e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 482 GGIFSPVIA--M--RAELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhhhHHH--H--HhccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 999996555 2 1122233455555666666555544443355
No 237
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.15 E-value=6e-05 Score=79.54 Aligned_cols=164 Identities=16% Similarity=0.153 Sum_probs=109.9
Q ss_pred hhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHH
Q 004754 525 GINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVL 604 (732)
Q Consensus 525 g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~ 604 (732)
..+.+..|.|++-++.|+++ .....+.....++..+| +++|.+.|++|.+.+++++.....++...+.+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq----------~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQ----------SQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred cccchhhhhHHHHHHhCCCH----------HHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999988877664 44455555666777665 78899999999999999999999999988776
Q ss_pred HHHhhcccchhhHHHHHHHHHHHHHHhhccc-chhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchh
Q 004754 605 SSVIKMGSVVHASISTVSVVLYFCCFVMGFG-PIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLA 683 (732)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~ 683 (732)
...-... ......++++.+..+.+.++. ......+.+.||. .||++.|+.-....+++.+.+.+...+... +..
T Consensus 86 ~~~~~i~---~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~ 160 (250)
T PF06813_consen 86 AVSGRIP---SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPS 160 (250)
T ss_pred HHhCccC---ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChH
Confidence 5432221 112333334334444443332 2333456688984 699999999999999999998888877765 333
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 004754 684 GVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 684 ~~f~~~~~~~~i~~i~~~~~~ 704 (732)
..+++.+....+..+....++
T Consensus 161 ~fll~la~~~~~v~l~~~~~v 181 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhhe
Confidence 444455555544444444444
No 238
>PRK11462 putative transporter; Provisional
Probab=98.14 E-value=0.0004 Score=78.95 Aligned_cols=126 Identities=14% Similarity=0.210 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHH
Q 004754 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLAR 103 (732)
Q Consensus 26 ~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~--s~~~LiI~R 103 (732)
+....++.+...- +....+++.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-
T Consensus 248 ~~~~~y~~~y~~g--~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (460)
T PRK11462 248 GGAMMYYVTWILG--TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFI 325 (460)
T ss_pred HhHhhhhhhhhcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Confidence 3334455554433 344556777888888999999999999999999987765554444333333332 233444555
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004754 104 LLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 104 ~L~G~g~G~~~~~~~alI~E~fP-------~~~Rg~~~~l~~~~~~~G~aIg~l~~l 153 (732)
++.|++.+...+...+++.|..+ .+..|...+......-+|..++.....
T Consensus 326 ~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g 382 (460)
T PRK11462 326 FVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIG 382 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788887777777778887766 344466566666777777777754443
No 239
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.07 E-value=2.4e-05 Score=69.37 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHH
Q 004754 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY 97 (732)
Q Consensus 18 ~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~ 97 (732)
.|..+..+.+.+|.+.++.++ |.++.|++.+..++||.+|.+...++.++..+++++..++++..+.++.+++..+++
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 477889999999999999999 999999999999999999999999999998899999999999999999999998877
Q ss_pred HHH
Q 004754 98 VLL 100 (732)
Q Consensus 98 ~Li 100 (732)
.+.
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 654
No 240
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.06 E-value=0.00034 Score=77.10 Aligned_cols=172 Identities=20% Similarity=0.220 Sum_probs=121.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhC-ChHHHHHHHHH
Q 004754 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVL 82 (732)
Q Consensus 4 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfG-rR~vLligllL 82 (732)
.|.+.+...+.++..+ +.-.-+|.|..|.|+ |..+.|++.++..+..+..++..-.+.+|.. +|+..+..+++
T Consensus 210 aW~vtLfmGlqS~~~Y----~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 210 AWQVTLFMGLQSLLYY----IVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred hHHHHHHHHhhHHHHH----HHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 3444444444333333 333447999999999 9999999999999999999999999999765 77788888888
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc-hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c
Q 004754 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE-IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-A 160 (732)
Q Consensus 83 ~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~-~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~-~ 160 (732)
+.++.+.+.+.|....+.. -++.|+|.|..++....++.+..+.. +-+...++.|..+.+=.++| |.....+.+ .
T Consensus 284 ~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~G--P~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFG--PWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhh--hhhHhHHHHhc
Confidence 8888888877765443333 48999999999999999999888644 33444555444444444444 333333333 4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhh
Q 004754 161 PSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 161 ~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
.+|+..+...+..+++..++.+..
T Consensus 361 gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHHhhc
Confidence 589999988888777766555433
No 241
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.05 E-value=4e-05 Score=87.34 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=100.3
Q ss_pred HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHH
Q 004754 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS----------PNVYVLLLAR 103 (732)
Q Consensus 34 ~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a----------~s~~~LiI~R 103 (732)
..+|. ++...|++.+...++.+++....+++.+|++.|+++.++.++.+++.+...+. ++.+.++..-
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 45677 89999999999999999999999999999999999999999998887654311 3444555667
Q ss_pred HHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004754 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 104 ~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~ 151 (732)
++.+++.+..+.+...++.+..|++.+|...++.+...++|..+++..
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~ 406 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFL 406 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999543
No 242
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00011 Score=78.56 Aligned_cols=144 Identities=14% Similarity=0.064 Sum_probs=103.2
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004754 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~ 110 (732)
..++.||+ |+...+-+.+......++.+++.|.++||+|++...+.+..+..+..-... .-+++.=.+...++|+..
T Consensus 290 fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l-~Ft~lsPy~~m~~lGLsy 366 (459)
T KOG4686|consen 290 FFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL-FFTFLSPYTSMTFLGLSY 366 (459)
T ss_pred HHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH-HhhhccHHHHHHHHhhhH
Confidence 57788999 889999999888888899999999999999999887776555544332221 223333445667788887
Q ss_pred hhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHH-HHHHHHHHHH
Q 004754 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLML-GVLFIPSLIY 177 (732)
Q Consensus 111 G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~-~~Wr~~~-~i~~~l~~i~ 177 (732)
...-......++-..|.++.|.+.++.+...++|.++.+++.......+. +.|--+| .+.+.++++.
T Consensus 367 sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 367 SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTS 435 (459)
T ss_pred HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHH
Confidence 77766677788888999999999999999999999998655543332222 2343333 3444444443
No 243
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=8.5e-05 Score=84.93 Aligned_cols=137 Identities=20% Similarity=0.169 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhhhcc
Q 004754 565 TLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNILCSE 644 (732)
Q Consensus 565 ~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 644 (732)
++..++.+...|.++||+|||..+......+.+..+++.+-. ++.++ .....+..+...+....++++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~----------~~~~~--~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG----------YWFFL--LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH----------HHHhh--hcccccchhhhhhhhhhheee
Confidence 677888899999999999999999888888877777776621 12222 222222233344556678899
Q ss_pred CCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHhccCCCCCChh
Q 004754 645 IFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIKVPETKGMPLE 713 (732)
Q Consensus 645 ~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~~~et~~~~~~ 713 (732)
+...+.|...+|+.+...+.+..++|.+.+.+....|+..+|.+-+++.++..++..+++||+...+.+
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999998765543
No 244
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.02 E-value=4.2e-05 Score=86.09 Aligned_cols=153 Identities=16% Similarity=0.155 Sum_probs=96.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHH--HHHH
Q 004754 553 SASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLY--FCCF 630 (732)
Q Consensus 553 ~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 630 (732)
+.....+++.+..++.++|+++.|++.||+|||+.+...+++++++-++..+.... ....-....+++| ..++
T Consensus 82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~-----~~~~~~m~~L~~~R~~LGi 156 (538)
T KOG0252|consen 82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT-----TSPLGVMMTLCFFRFLLGI 156 (538)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC-----CCCcchhhHHHHHHHHhhc
Confidence 34566677778899999999999999999999999999999888888755553221 1111222333333 3334
Q ss_pred hhcc-cchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHH---HHhh------------chhHHHHHHHHHHH
Q 004754 631 VMGF-GPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVL---LNSV------------GLAGVFGMYAVVCV 694 (732)
Q Consensus 631 ~~~~-~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l---~~~~------------g~~~~f~~~~~~~~ 694 (732)
++|- .|+..+.++|....+.||+-.+..-+++.+|...+..+.-.+ ++.. =|+..|. ++.+-.
T Consensus 157 GIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~g-lg~vpa 235 (538)
T KOG0252|consen 157 GIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFG-LGAVPA 235 (538)
T ss_pred cccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH-HHHHHH
Confidence 4332 678888999999999999888777666655544443333322 2221 1443333 333333
Q ss_pred HHHHHHHHhccCCCCCC
Q 004754 695 ISWIFVFIKVPETKGMP 711 (732)
Q Consensus 695 i~~i~~~~~~~et~~~~ 711 (732)
+..+..-..+|||+..+
T Consensus 236 ~~~ly~Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 236 LLVLYFRLKMPETARYT 252 (538)
T ss_pred HHHHHhhhcCCcchhHH
Confidence 33344445689998655
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.02 E-value=0.0003 Score=80.19 Aligned_cols=140 Identities=18% Similarity=0.210 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh
Q 004754 14 GNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~I~~d-lgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~ 92 (732)
.+++........+.+..+..+. +|. +.....+.......+.+++.+++..+++|+|+|+++.++.++.+++.++..+
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~~y~lg~--~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f 321 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYVTYVLGD--PELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYF 321 (467)
T ss_pred HHHHHHHHHHHHhhhhheeEEEEcCC--hHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHh
Confidence 4444444444444454544432 343 5666777777778888888999999999999999999999999999999888
Q ss_pred hh--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC-------cchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 93 SP--NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 93 a~--s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP-------~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
.+ +.+.+++..++.+++.+...+...++++|..+ .|.-|...+...++.=+|.+++.......
T Consensus 322 ~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~ 393 (467)
T COG2211 322 TPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWI 393 (467)
T ss_pred hcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 78888888999999999999999999988865 34448888888888888888886444433
No 246
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.02 E-value=7.5e-05 Score=84.05 Aligned_cols=143 Identities=14% Similarity=0.139 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh----hCChHH-HHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRRPM-LIVSSVL 82 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr----fGrR~v-LligllL 82 (732)
++..+...+...+....-...++.+.+.+|+ +....+.+--+..+...+.+++.|..+|| |||||. +.++.++
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGv--phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGV--PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCC--CcccccccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 3344444444444444444567788889999 66777777778888889999999999995 787665 5556666
Q ss_pred HHHHHHHHHhhhhH-----------------HHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhh-hhhHHHHHHHHH
Q 004754 83 YFIGGLVMLWSPNV-----------------YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGL-LNTLPQFTGCVG 144 (732)
Q Consensus 83 ~aIgsll~a~a~s~-----------------~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~-~~~l~~~~~~~G 144 (732)
.+++.++..++.++ .++++.--|.=++.-......-+++.|......+-+ +++.+..+.++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 67777777776443 334444444555666778889999999997766666 999999999999
Q ss_pred HHHHHHHH
Q 004754 145 MFLAYCMV 152 (732)
Q Consensus 145 ~aIg~l~~ 152 (732)
..+|+...
T Consensus 192 nvLGY~~g 199 (498)
T KOG0637|consen 192 NVLGYALG 199 (498)
T ss_pred ceeeeecc
Confidence 99995444
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.01 E-value=8.2e-05 Score=85.14 Aligned_cols=160 Identities=18% Similarity=0.160 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHH
Q 004754 19 GWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYV 98 (732)
Q Consensus 19 ~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~ 98 (732)
|.....+...+=.-.+|++. .+...|.....-..+-++.-++++++..|+|+-+++.+++.+.++=.+...+..|.|.
T Consensus 384 G~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~ 461 (618)
T KOG3762|consen 384 GAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWM 461 (618)
T ss_pred HHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchh
Confidence 33333333333344566665 6777888888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 004754 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (732)
Q Consensus 99 LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~-~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~ 177 (732)
.+..-+++|+..+.++.+..+|+....|++.|..+.++.+ .+.++|--+|+++. +......+=|..|.+.++.|++.
T Consensus 462 vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIG--G~~v~~fg~~ttf~~~giAcl~~ 539 (618)
T KOG3762|consen 462 VLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIG--GFVVERFGARTTFRIFGIACLVT 539 (618)
T ss_pred eeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhh--hhhheeehhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876 44577777774443 44456678899999999988887
Q ss_pred HHHHH
Q 004754 178 FVLTI 182 (732)
Q Consensus 178 ~~l~~ 182 (732)
+++.+
T Consensus 540 l~~~~ 544 (618)
T KOG3762|consen 540 LALFI 544 (618)
T ss_pred HHHHH
Confidence 76543
No 248
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.98 E-value=8.2e-05 Score=84.65 Aligned_cols=146 Identities=22% Similarity=0.234 Sum_probs=108.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+|++.+++..+++ .++...-...+++||++|| +|+|++++.+.++++++.+++..... .......+.+.+..
T Consensus 56 Lg~~~~~A~~l~~-~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~------~~~~gl~i~L~~I~ 128 (498)
T COG3104 56 LGFDETHATGLFS-AYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSV------SGPGGLYIGLALII 128 (498)
T ss_pred CCcChHhhHHHHH-HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccc------ccccHHHHHHHHHH
Confidence 6678766666655 4666667788999999999 59999999999999999999887420 01123333344444
Q ss_pred HHHhhcccchhhhhhccCCCccc--hhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHH
Q 004754 628 CCFVMGFGPIPNILCSEIFPTRV--RGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 628 ~~~~~~~~~~~~~~~~e~~p~~~--r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~ 702 (732)
++.+ .+=+-+..+..|++|++. |-.+.++.....++|++++|++.+++.+..||...|...++-..++.+..++
T Consensus 129 iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 129 VGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred hccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 334455567789887632 5667777788889999999999999999999999999998888888666554
No 249
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.93 E-value=1.9e-07 Score=103.77 Aligned_cols=144 Identities=16% Similarity=0.172 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccc
Q 004754 557 SLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGP 636 (732)
Q Consensus 557 ~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (732)
..+......++.++|.+++|++.||+|||+.+..+..+..++.++..+.... .+.+...+.-++.+++.+ +..+
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~R~~~G~~~g-~~~~ 121 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----NNFWMLLIGRFLIGFGIG-GAYV 121 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccc-cccc
Confidence 4455566789999999999999999999999999998888888877763210 011222222233333333 2344
Q ss_pred hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh---chhHHHHHHHHHHHHHHHHHHHhccCC
Q 004754 637 IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV---GLAGVFGMYAVVCVISWIFVFIKVPET 707 (732)
Q Consensus 637 ~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~---g~~~~f~~~~~~~~i~~i~~~~~~~et 707 (732)
...+++.|..|++.|+...++.+....+|.+++..+.-.+.+.. +|+..+++.++.+++..+ ...++||+
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 55688899999999999999998888888877776655443333 378777777666665544 44678887
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.93 E-value=0.00013 Score=84.14 Aligned_cols=151 Identities=15% Similarity=0.087 Sum_probs=106.3
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
.++...+.+.+ ..++.++-+++.+.++.+.||++-.+.+..+. ++..++.+.... .++...++.+-++..
T Consensus 76 l~~~~~~l~~~-~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~----~~w~~~~~~~~~-----~~s~~~~ialr~llG 145 (495)
T KOG2533|consen 76 LKLVGNQLGVL-DTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG----ILWGLFGFLTAA-----VHSFPGLIALRFLLG 145 (495)
T ss_pred cchhhhhhhhH-HHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH----HHHHHHHHHHHH-----HhhhHHHHHHHHHHH
Confidence 34444444444 45677889999999999999999444433322 222222211100 133444555544555
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH------HhhchhHHHHHHHHHHHHHHHHHHH
Q 004754 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL------NSVGLAGVFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~------~~~g~~~~f~~~~~~~~i~~i~~~~ 702 (732)
.+-.+..|....+++..+.++.|+.-+|+.++...+|+++++++...+. ...||++.|++-++++++..+++++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred HHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 5544555655677799999999999999999999999999999999874 3569999999999999999999999
Q ss_pred hccCCCC
Q 004754 703 KVPETKG 709 (732)
Q Consensus 703 ~~~et~~ 709 (732)
++|+...
T Consensus 226 ~lp~~P~ 232 (495)
T KOG2533|consen 226 FLPDNPS 232 (495)
T ss_pred EecCChh
Confidence 9986543
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.92 E-value=0.0048 Score=72.54 Aligned_cols=164 Identities=18% Similarity=0.185 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHHHHHHHhhhhH-------
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPNV------- 96 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aIgsll~a~a~s~------- 96 (732)
....+.++..+++. +.....-..+.+.-......+.+++++|-| ||-+++.++.++..++.++..++...
T Consensus 57 ~~nlv~ylt~~~~~--~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~ 134 (571)
T KOG1237|consen 57 VSNLVTYLTLELHA--SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFM 134 (571)
T ss_pred hhHHHHHHHHHhcc--chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Confidence 35677889999998 667777777777777778889999999976 78899999988888886555442111
Q ss_pred ------------------HHHHHHHHHHHHHHhhHhHHHHHHHHhcCC---cchh---hhhhhHHHHHHHHHHHHHHHHH
Q 004754 97 ------------------YVLLLARLLDGFGIGLAVTLVPIYISETAP---PEIR---GLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 97 ------------------~~LiI~R~L~G~g~G~~~~~~~alI~E~fP---~~~R---g~~~~l~~~~~~~G~aIg~l~~ 152 (732)
..+..+..+..+|.|+.-+...++-+|-++ ++++ ...+.++....++|..++ ..
T Consensus 135 ~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a--~t 212 (571)
T KOG1237|consen 135 CKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA--QT 212 (571)
T ss_pred ccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH--HH
Confidence 355556667778999999999999999998 3222 245666777788888887 33
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCchhhhhc
Q 004754 153 FGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSK 195 (732)
Q Consensus 153 l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp~~l~~~ 195 (732)
.....-++.+|.+-|.+......+.+ ++|++-+|.|...+
T Consensus 213 ~~vyiq~~~~w~lgf~i~~~~~~lai---~iF~~g~~~y~~~~ 252 (571)
T KOG1237|consen 213 VLVYIQDNVGWKLGFGIPTVLNALAI---LIFLPGFPFYRYKK 252 (571)
T ss_pred HHHhhhhcccceeeccHHHHHHHHHH---HHHHcCceeEEeeC
Confidence 33444467799999988877655533 34455555554433
No 252
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.89 E-value=0.0004 Score=82.68 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh-hCChHHHHHHHHHHHHHHHHHHhhh--------h
Q 004754 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGLVMLWSP--------N 95 (732)
Q Consensus 25 ~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr-fGrR~vLligllL~aIgsll~a~a~--------s 95 (732)
....+.++...+|+ +.+....+...+....-+..+++|.++|+ +|+++.++++.++..++.++.++.. .
T Consensus 7 ~aiLvlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 7 RTILVLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred HHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 34456677888898 77888888888888888999999999996 6999999999999999888877642 1
Q ss_pred HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcch---hhhhhhHHHHHHHHHHHHHHHHHHHHHh-h----ccchhHHHH
Q 004754 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSL-M----TAPSWRLML 167 (732)
Q Consensus 96 ~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~---Rg~~~~l~~~~~~~G~aIg~l~~l~~~l-~----~~~~Wr~~~ 167 (732)
....+++-++..+|.|++-++..+...|.+++++ |-....++..+.++|.+++..+...... . ...+|...|
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 2346677788889999999999999999997543 5556667777778887777443332211 1 134799999
Q ss_pred HHHHHHHHHHHHHH
Q 004754 168 GVLFIPSLIYFVLT 181 (732)
Q Consensus 168 ~i~~~l~~i~~~l~ 181 (732)
.+.++..++.+++.
T Consensus 165 ~i~~i~m~ia~lvf 178 (654)
T TIGR00926 165 GVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988877766543
No 253
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.87 E-value=0.00073 Score=66.53 Aligned_cols=107 Identities=21% Similarity=0.187 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCc
Q 004754 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (732)
Q Consensus 48 l~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~ 127 (732)
-.++......+++++.+.+.+++|.|+.++++.+...+-... -+-++.+.++.+-++.|++.+..+++.-.++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 445556667788888899999999999999999988865444 4567889999999999999999999999999999999
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 004754 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 128 ~~Rg~~~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
+.|++-.++.-.....+.++|.+.....
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888888885555443
No 254
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00051 Score=72.90 Aligned_cols=92 Identities=21% Similarity=0.353 Sum_probs=70.1
Q ss_pred HHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004754 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 31 ~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~ 110 (732)
++-+.++. ...++|.+.-+.+-..++...+.|-++||-|||+.-+.-++...++ .+.-.+|.+-+++++|.+-|++.
T Consensus 62 yLYstYgF--gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 62 YLYSTYGF--GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeehhcCc--cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCCceEEEeehhhhhhHHH
Confidence 34455676 6678888777777778888899999999999999655555555443 33456789999999999999999
Q ss_pred hhHhHHHHHH-HHhcC
Q 004754 111 GLAVTLVPIY-ISETA 125 (732)
Q Consensus 111 G~~~~~~~al-I~E~f 125 (732)
+..+.+..++ +.|.-
T Consensus 139 sLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9998887665 45554
No 255
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.0019 Score=72.09 Aligned_cols=159 Identities=11% Similarity=0.042 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~d-lgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a 91 (732)
++.++.--....+...++.+..+ .|+ +..+.....+.+..+.++|.+++.++..|+-..+++.+..++..+-++..+
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~--~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGL--NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 34444333344455556655555 777 888999999999999999999999999999999999999888888888888
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004754 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
+++++..+ .+-++.|+..+..+|...+...+..| ++ ....+..-+...+|.++. |...+...+..+-+..+.+..
T Consensus 321 l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAii--P~l~G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 321 LIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAII--PPLQGVIADMFGIQLTFLIVP 395 (422)
T ss_pred HhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHH--HHHHHHHHHhhhhHHHHHHHH
Confidence 88885444 45678899999999999999999999 44 444455566777888887 777777888888888888666
Q ss_pred HHHHHHH
Q 004754 172 IPSLIYF 178 (732)
Q Consensus 172 ~l~~i~~ 178 (732)
.+|.++.
T Consensus 396 llc~lyV 402 (422)
T COG0738 396 LLCYLYV 402 (422)
T ss_pred HHHHHHH
Confidence 6677655
No 256
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.54 E-value=0.0027 Score=75.78 Aligned_cols=151 Identities=19% Similarity=0.294 Sum_probs=97.4
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhh-cccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMD-ISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYF 627 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d-~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (732)
+|.+.+.+..++.. +.....+..+++|++.| ++||+++++.+.++..++.+++.+..........+.... .+.+..
T Consensus 18 lg~~~~~A~~i~~~-f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~--l~gLaL 94 (654)
T TIGR00926 18 LGFSESTSTVLFHT-FTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD--LLGLAL 94 (654)
T ss_pred cCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH--HHHHHH
Confidence 34555555555554 45555567778999999 579999999998888888877766322111101111112 222222
Q ss_pred HHHhhc-ccchhhhhhccCCCcc---chhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------chhHHHHHHHHHHHHH
Q 004754 628 CCFVMG-FGPIPNILCSEIFPTR---VRGICIAICALVFWIGDIIVTYSLPVLLNSV-------GLAGVFGMYAVVCVIS 696 (732)
Q Consensus 628 ~~~~~~-~~~~~~~~~~e~~p~~---~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~-------g~~~~f~~~~~~~~i~ 696 (732)
...|.+ +-+...+...+.++++ .|-..+.+...+.++|+++++.+.+++.+.. +|...|.+.+++.+++
T Consensus 95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 333332 2333445667777643 3667888888899999999999999988554 5888888888888877
Q ss_pred HHHHHH
Q 004754 697 WIFVFI 702 (732)
Q Consensus 697 ~i~~~~ 702 (732)
.++...
T Consensus 175 ~lvf~~ 180 (654)
T TIGR00926 175 LIVFMA 180 (654)
T ss_pred HHHHHH
Confidence 666544
No 257
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.51 E-value=0.0015 Score=75.01 Aligned_cols=149 Identities=12% Similarity=0.007 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccc-hhHHHhhHHHHHHHHHHH-HHHHHhhcccchhhHHHHHHHHHHHHHHhh
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGR-RTLLLSTIPILITSLVVL-VLSSVIKMGSVVHASISTVSVVLYFCCFVM 632 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~gr-r~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (732)
+..+++.+...++.++++++.++...|.+. |+.++.+.++++++.++. .+.+.. +.+..++.+.=+.++++.
T Consensus 71 ~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~------~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 71 TFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP------NGVKYLMLVARILTGVGV 144 (488)
T ss_pred chhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc------cchHHHHHHHHHHcCcCc
Confidence 345555666899999999999999999884 556666666777776665 332221 112333334444445555
Q ss_pred cccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh-------------chhHHHHHHHHHHHHHHHH
Q 004754 633 GFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV-------------GLAGVFGMYAVVCVISWIF 699 (732)
Q Consensus 633 ~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~-------------g~~~~f~~~~~~~~i~~i~ 699 (732)
+.....-.|.+...-.+.|.++++..+..+-+|.++||.+...+.... -+..+-|+.+.++++..++
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 555666688888777788889999888888888888887776554321 1455778888888988888
Q ss_pred HHHhccCCCC
Q 004754 700 VFIKVPETKG 709 (732)
Q Consensus 700 ~~~~~~et~~ 709 (732)
+.++++|-..
T Consensus 225 i~~~f~E~~~ 234 (488)
T KOG2325|consen 225 ILFFFKEVYR 234 (488)
T ss_pred HHhheeeccc
Confidence 8888877543
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.49 E-value=0.00083 Score=58.36 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
.-+++.....+.+.|.+|...++.|+ ++.++|++.++..+...++++++|.++||+|+++.++....++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34455555566777777777788899 9999999999999999999999999999999998877766554
No 259
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.48 E-value=0.011 Score=66.35 Aligned_cols=147 Identities=12% Similarity=0.062 Sum_probs=116.8
Q ss_pred HHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh-hhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q 004754 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-WLGRRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARLL 105 (732)
Q Consensus 30 ~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsD-rfGrR~vLligllL~aIgsll~a~---a~s~~~LiI~R~L 105 (732)
||=.+-||+ +..+...+.+....|..++....|++.. |.++++.-.+++.+.+++..+..+ ..+.+.+...-++
T Consensus 233 Pygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l 310 (403)
T PF03209_consen 233 PYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFL 310 (403)
T ss_pred CchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 566677899 8899999999999999999999999887 778888888888887777666444 4578899999999
Q ss_pred HHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh-----h---ccchhHHHHHHHHHHHHHH
Q 004754 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-----M---TAPSWRLMLGVLFIPSLIY 177 (732)
Q Consensus 106 ~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l-----~---~~~~Wr~~~~i~~~l~~i~ 177 (732)
.|++.|.......+.+.+...+++.|..+|.+.....+...++......... . ...++-.+|.+.++..++.
T Consensus 311 ~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a 390 (403)
T PF03209_consen 311 LGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAA 390 (403)
T ss_pred HHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877777766444333221 1 2246777887777765554
Q ss_pred H
Q 004754 178 F 178 (732)
Q Consensus 178 ~ 178 (732)
+
T Consensus 391 ~ 391 (403)
T PF03209_consen 391 L 391 (403)
T ss_pred H
Confidence 4
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.40 E-value=0.003 Score=71.39 Aligned_cols=122 Identities=21% Similarity=0.212 Sum_probs=86.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhH--HHHHHHHHHH--HH
Q 004754 554 ASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHAS--ISTVSVVLYF--CC 629 (732)
Q Consensus 554 ~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~ 629 (732)
..++.+.+.++.+..++..+.+.|+.||+|-|...+.+.....++..+=.+........ +.+ +....-.+-. --
T Consensus 78 ~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~--~f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 78 SSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPP--LFRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccc--cchhhhhHHhHHHHHHhhh
Confidence 36788889999999999999999999999999999999999988887766654432111 122 1111111111 11
Q ss_pred HhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q 004754 630 FVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSV 680 (732)
Q Consensus 630 ~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~ 680 (732)
|.+++ +.=+..-.||+++|++|..+......+|..++..+-+.++.+.
T Consensus 156 Fim~l---PskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 156 FILGL---PSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred Hhhcc---ccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 22222 1123345699999999999999999999999988888887654
No 261
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.38 E-value=0.023 Score=63.26 Aligned_cols=138 Identities=22% Similarity=0.171 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhh-----hhCChHHHHH-HHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-----WLGRRPMLIV-SSVL 82 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsD-----rfGrR~vLli-gllL 82 (732)
..+.+-++++|...+.+. .+|.+.+.-|. |.++.+....++. -...-++|..+.| |+||||..++ +..+
T Consensus 34 llLl~LYllQGiP~GL~~-~iP~lL~ak~v--Syt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~l 108 (510)
T KOG3574|consen 34 LLLLFLYLLQGIPLGLIG-AIPLLLQAKGV--SYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYL 108 (510)
T ss_pred HHHHHHHHHcCCchhHhh-hhHHHhcCCCc--chhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHH
Confidence 345566889999999888 99999998887 7777765443322 1233468888888 9999986543 2333
Q ss_pred HHHHHHHHHh-----------hhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004754 83 YFIGGLVMLW-----------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 83 ~aIgsll~a~-----------a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~ 151 (732)
.+..+.+.++ .|+...+...-++.-|..+.--.++-.+...+..+++-|.+.+-..++...|.+++...
T Consensus 109 lG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 109 LGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 3333333333 23445555556777777777778888888889999999999999999999999888443
No 262
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.32 E-value=0.014 Score=64.60 Aligned_cols=152 Identities=16% Similarity=0.088 Sum_probs=90.6
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
+|++..+.+.++.. ..++.++...+.|.+.||+|||+..+...++..++++.... .+..+.++.-++-+.
T Consensus 64 yg~~~~qIa~Lf~~-Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~---------~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 64 YGFSEHQIAILFVA-GFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHS---------SNYPVLLLGRVLGGI 133 (354)
T ss_pred cCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhc---------cccHHHHHHHHHHHH
Confidence 45555566666654 45666777778899999999999888777777777764322 112233333333333
Q ss_pred HHhhcccchhhhhhcc----CCCccchhhHHHHHH-HHHHHHHHHHHhHHHHHHHhhch--hHHHHHHHHHHHHHHHHHH
Q 004754 629 CFVMGFGPIPNILCSE----IFPTRVRGICIAICA-LVFWIGDIIVTYSLPVLLNSVGL--AGVFGMYAVVCVISWIFVF 701 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e----~~p~~~r~~~~gi~~-~~~~ig~~i~~~~~~~l~~~~g~--~~~f~~~~~~~~i~~i~~~ 701 (732)
...+-+.+.=.=++.| -+|.+..+...+... ....+-.++...+.-++.+..|. ..+|..-.++.+++.+++.
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 3333222211112233 345555555555554 23344556666666666776654 6678777777788877777
Q ss_pred HhccCCCCC
Q 004754 702 IKVPETKGM 710 (732)
Q Consensus 702 ~~~~et~~~ 710 (732)
..-+|..|.
T Consensus 214 ~~W~ENyg~ 222 (354)
T PF05631_consen 214 KTWPENYGD 222 (354)
T ss_pred hcccccCCC
Confidence 777887665
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.29 E-value=0.54 Score=53.76 Aligned_cols=115 Identities=10% Similarity=0.037 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccch-hHHHhhHHHHHHHHHHHHHHHHhhccc-----chhhHHHHHHHHHHHH
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRR-TLLLSTIPILITSLVVLVLSSVIKMGS-----VVHASISTVSVVLYFC 628 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr-~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 628 (732)
....+...++.++.++|..+..+..- .++| +.+.+....=.+.+..+.+. ...... ..+.+..++..++++.
T Consensus 307 ~~~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~iFIPlf~lc-n~~~~~~~p~~~~~d~~~~~~~~l~gl 384 (437)
T TIGR00939 307 FYPIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVLFIPLFLLC-NYPQRSRLPVFFPGDAYFIILMLLFGF 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHHHHHHHHHh-cCCccccCCeeecccHHHHHHHHHHHH
Confidence 35556667788999999886654321 2222 12222222222222222222 111100 0122333333333333
Q ss_pred HHhhcccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004754 629 CFVMGFGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 629 ~~~~~~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
..| -.++....+.++..+++.|..+-.+...+-.+|-.+|..+
T Consensus 385 tnG-y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 385 SNG-YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred hhh-HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 2234555677888888888887777777777776666554
No 264
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.09 E-value=0.013 Score=64.41 Aligned_cols=135 Identities=13% Similarity=0.164 Sum_probs=98.2
Q ss_pred HHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhh
Q 004754 53 LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGL 132 (732)
Q Consensus 53 ~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~ 132 (732)
.-.+.+.-++.=.+.|..--|+++++-.+....+..+..+.++.+.+-+.-+..|...+.- .+.++++-+..+++++-+
T Consensus 52 TYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yqr 130 (433)
T KOG3810|consen 52 TYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYKR 130 (433)
T ss_pred hHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHHH
Confidence 3345666666667899998899999888888888888899999999999999999877655 778889999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhccCCc
Q 004754 133 LNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (732)
Q Consensus 133 ~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~esp 189 (732)
+.+....+.-+|-..|...+-.....+..+....=.+ .+.+..+..+..+++|..|
T Consensus 131 vt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~ 186 (433)
T KOG3810|consen 131 VTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVLLALFLPRVK 186 (433)
T ss_pred HHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchh-hHHHHHHHHHHHhhCCCCc
Confidence 9999988888888888544433333333344443333 2333333444566777654
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.56 E-value=0.023 Score=64.44 Aligned_cols=154 Identities=25% Similarity=0.265 Sum_probs=93.0
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcc-----cchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHH
Q 004754 548 NLGISSASASLLISGITTLLMLPSIAVAMRLMDIS-----GRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVS 622 (732)
Q Consensus 548 ~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~-----grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (732)
.+|.++++...+.. +..+--. .-++.|.++|-+ .||.-++++..+..++++.+.+... .. .......
T Consensus 19 ~l~ls~~~~~~~~~-~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~----~~--~s~~~~~ 90 (433)
T PF03092_consen 19 DLGLSPAQLQRLSS-LASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPA----SE--SSAAIAV 90 (433)
T ss_pred HcCCCHHHHHHHHH-HHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccc----cc--chhhhHH
Confidence 34556655444322 2222222 356888999976 3455555555555444444444211 11 1122222
Q ss_pred HHHHHHHHhhccc-chhhhhhccCC---CccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 004754 623 VVLYFCCFVMGFG-PIPNILCSEIF---PTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWI 698 (732)
Q Consensus 623 ~~~~~~~~~~~~~-~~~~~~~~e~~---p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i 698 (732)
++++...++..+. ...-.+..|.. |.+ ++.-.+.+..+..+|++++..+.|++.+..+++..|.+.+.+.++..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 3333333333332 23344556655 444 788888999999999999999999999999999999999888888877
Q ss_pred HHHHhccCCCCC
Q 004754 699 FVFIKVPETKGM 710 (732)
Q Consensus 699 ~~~~~~~et~~~ 710 (732)
..++..+|.+.+
T Consensus 170 ~~~~~~~e~~~~ 181 (433)
T PF03092_consen 170 VALFLLEERKVR 181 (433)
T ss_pred HHHHhhhhcccc
Confidence 777777774433
No 266
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.55 E-value=0.15 Score=50.68 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhh-ccc
Q 004754 557 SLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVM-GFG 635 (732)
Q Consensus 557 ~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 635 (732)
..+......+...++.++.|++.||.|||+.++.+.....++.+...+... ...+..++.... .+++. ...
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~--~g~~~~~~~ 112 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLL--QGLGGGGLL 112 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHH--HHhhhHHHH
Confidence 344445567777777799999999999997777666553333222222110 011111111111 22222 344
Q ss_pred chhhhhhccCCCc-cchhhHHHHHHH-HHHHHHHHHHhHHHHHHHh--hchhHHHHHHHHHH
Q 004754 636 PIPNILCSEIFPT-RVRGICIAICAL-VFWIGDIIVTYSLPVLLNS--VGLAGVFGMYAVVC 693 (732)
Q Consensus 636 ~~~~~~~~e~~p~-~~r~~~~gi~~~-~~~ig~~i~~~~~~~l~~~--~g~~~~f~~~~~~~ 693 (732)
+....+..|.+|. +.|+...++... ...+|..+++.+.+.+... .+|+..|.......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 113 PVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 5566788899987 668888888888 5777888888777666654 46666555444444
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.34 E-value=0.32 Score=56.16 Aligned_cols=124 Identities=8% Similarity=-0.016 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccch---------------h-h--
Q 004754 555 SASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVV---------------H-A-- 616 (732)
Q Consensus 555 ~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---------------~-~-- 616 (732)
....+.........++..++.+++++|++|++++-......+..++++.+...+..+..+ . .
T Consensus 44 ~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i 123 (472)
T TIGR00769 44 IIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFI 123 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHH
Confidence 344444433333344447888999999999999887777776666666554332211100 0 0
Q ss_pred ----HHHHHHHHHHHHHHhhcccc-hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 004754 617 ----SISTVSVVLYFCCFVMGFGP-IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN 678 (732)
Q Consensus 617 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~ 678 (732)
.+......+..-.++....+ +.|.+.+|++..++-.+-+++..+..++|.++++.+..++.+
T Consensus 124 ~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 124 AILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222233333333 668899999999999999999999999999999999988774
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.26 E-value=0.023 Score=49.34 Aligned_cols=66 Identities=20% Similarity=0.245 Sum_probs=50.4
Q ss_pred HHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHH
Q 004754 519 ILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPI 594 (732)
Q Consensus 519 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~ 594 (732)
.+..+++...+.-|.|.++++.|++ + ....++..+..+..+++.++.|+++||.++++.++....+
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~---------~-~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLS---------P-SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCC---------H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3344455677888999999987665 3 5566666778899999999999999999999887655443
No 269
>PRK03612 spermidine synthase; Provisional
Probab=96.00 E-value=0.95 Score=52.96 Aligned_cols=159 Identities=11% Similarity=-0.016 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHH---HHHHHH-
Q 004754 16 LLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF---IGGLVM- 90 (732)
Q Consensus 16 ~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~a---Igsll~- 90 (732)
++.|...-..-.+... +.--+|. +...++++.+++.+|.++|+.+++++.++.-++. ..+-+.+.. ++..+.
T Consensus 24 f~sg~~~L~yEv~~~r~l~~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~ 100 (521)
T PRK03612 24 FVCAACGLVYELLLGTLASYLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILY 100 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 3344443333333333 3345676 7889999999999999999999988864322222 211111111 111111
Q ss_pred ---Hhhhh-HHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 004754 91 ---LWSPN-VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (732)
Q Consensus 91 ---a~a~s-~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~ 166 (732)
.+... ...++...++.|+..|+..|....+..+... ++-|...+-......+|.++|.+......+ ...|-...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl-p~lG~~~t 178 (521)
T PRK03612 101 AAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL-PRLGLIRT 178 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH-HhcchHHH
Confidence 11111 1223344567788888888887777765433 223455566666667777777554433332 22343333
Q ss_pred HHHHHHHHHHHHH
Q 004754 167 LGVLFIPSLIYFV 179 (732)
Q Consensus 167 ~~i~~~l~~i~~~ 179 (732)
.++.+.+.++..+
T Consensus 179 ~~~~a~l~~~~a~ 191 (521)
T PRK03612 179 AALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.90 E-value=0.04 Score=60.69 Aligned_cols=104 Identities=14% Similarity=0.254 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcc---hhhhhhhHHHHHH
Q 004754 74 PMLIVSSVLYFIGGLVMLWS--P-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE---IRGLLNTLPQFTG 141 (732)
Q Consensus 74 ~vLligllL~aIgsll~a~a--~-------s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~---~Rg~~~~l~~~~~ 141 (732)
++++++.++..+|.++..++ + +.+.++++-++.++|.|+.=|....+++|.++++ +|.....++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888884443 2 2267888899999999999999999999999865 4566777888999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 004754 142 CVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (732)
Q Consensus 142 ~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~ 179 (732)
++|..++. .......+..+|.+.|++.++..++.++
T Consensus 82 n~G~~~~~--~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 82 NIGSLFSP--TLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp HHHHHHHH--HCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhc--ccchhhccccchhhhhhHHHHHHHHHHH
Confidence 99999983 3334445678999999998887766543
No 271
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.80 E-value=0.51 Score=54.32 Aligned_cols=106 Identities=22% Similarity=0.260 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHhh---hhhCChHHHHHHHHHHHHHHHHHHhh------------------hhHHHHH
Q 004754 42 PTIEGLIVAMSLIGATCITTCSGAIA---DWLGRRPMLIVSSVLYFIGGLVMLWS------------------PNVYVLL 100 (732)
Q Consensus 42 ~s~igll~Sif~IG~~Ig~~~~g~Ls---DrfGrR~vLligllL~aIgsll~a~a------------------~s~~~Li 100 (732)
...+++..-...++..+++.+.+.+. +++||++.+.++.++..++.++.-.. +++...+
T Consensus 278 ~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ 357 (461)
T KOG3098|consen 278 TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLAL 357 (461)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHH
Confidence 34445555555566666667777776 56899999999888887777765442 2567888
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 101 I~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
+.-++.|++-+......+.++...+ +++|..+.++.-...+++..++
T Consensus 358 ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 358 IIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999 4778888888887777777665
No 272
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=95.76 E-value=0.46 Score=50.75 Aligned_cols=57 Identities=12% Similarity=0.340 Sum_probs=41.9
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHH---HhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 004754 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM---SLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (732)
Q Consensus 128 ~~Rg~~~~l~~~~~~~G~aIg~l~~l~~---~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~ 184 (732)
|+|+....+...++++|.++..+|.... .......|++++.+.+++.++-+++.+++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888899999999999986665443 12223479999999998888766654433
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.73 E-value=2.4 Score=48.03 Aligned_cols=120 Identities=11% Similarity=0.002 Sum_probs=59.6
Q ss_pred hHHHHHHHH-HHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhc
Q 004754 555 SASLLISGI-TTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 555 ~~~~~~~~i-~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (732)
....+.... +.+..++|.+...++.++-.|+....+.+-...+-++.+..+.. ......+.++.++..++++..-| -
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~-~~v~~~~~~~~~~l~~~lglsnG-Y 359 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPP-LPVVFESDGWFIFLMSLLGLSNG-Y 359 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCC-CCceecCchHHHHHHHHHHhccc-h
Confidence 455555555 78888888777777666655554444433333333333222100 00001122233333332222221 2
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHH
Q 004754 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLL 677 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~ 677 (732)
+.++...+.++-.|++.+ .+.|....+.-++++....+.+++.
T Consensus 360 ltsl~m~~aPk~v~~~e~-e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 360 LTSLIMMYAPKQVKPSEK-EAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred HhhheehhcCCCCChHHH-HHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 344556677788887755 4455555666565555555555543
No 274
>PRK03612 spermidine synthase; Provisional
Probab=95.57 E-value=0.89 Score=53.16 Aligned_cols=49 Identities=16% Similarity=0.294 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHH-hhchhHHHHHHHHHHHHHHHH
Q 004754 651 RGICIAICALVFWIGDIIVTYSLPVLLN-SVGLAGVFGMYAVVCVISWIF 699 (732)
Q Consensus 651 r~~~~gi~~~~~~ig~~i~~~~~~~l~~-~~g~~~~f~~~~~~~~i~~i~ 699 (732)
-+...|-..++..+|+++|++++++++- ..|.....++++++.+++.++
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALV 192 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 3566788888999999999999998775 577666666665555544433
No 275
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.56 E-value=0.44 Score=54.43 Aligned_cols=141 Identities=15% Similarity=0.160 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHH
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll 89 (732)
...++..+.++.--.+...+......-|+ ++..+|..-++..+..+.++.+..++.+|+|..+.-++++....++..+
T Consensus 262 las~alalLY~TVLsf~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 262 LASFALALLYFTVLSFGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHH
Confidence 34444444444333334444444444499 9999999999999999999999999999999998888887766555444
Q ss_pred HH---hhh-------hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 90 ML---WSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 90 ~a---~a~-------s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
+. |.+ +...++.+-.+.=+|.=+.-.+..-++-|..|.++||..++.-....++-.++.....
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 43 222 2333443344444444344566777888999999999999998877777776664443
No 276
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.53 E-value=1.9 Score=50.04 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCchhHHHHHHHH---HHHHHHHHHHhHHHhhhhhCChHHHHH------
Q 004754 10 AAAIGNLLQGWDNATIAGAVLYIKRE--FHLETEPTIEGLIVAM---SLIGATCITTCSGAIADWLGRRPMLIV------ 78 (732)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~I~~d--lgl~~s~s~igll~Si---f~IG~~Ig~~~~g~LsDrfGrR~vLli------ 78 (732)
++.+-++++|...+.....+|.+.++ -+. +.++.|...-+ |.+=..-+.++=...+.|+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCC--ChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 45667888999888766788999888 666 77887653322 112222223333444558999997654
Q ss_pred HHHHHHHHHHH----------HHhh-------h--hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHH
Q 004754 79 SSVLYFIGGLV----------MLWS-------P--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQF 139 (732)
Q Consensus 79 gllL~aIgsll----------~a~a-------~--s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~ 139 (732)
|..+..++.-. -.+. + +...+...-++.=+..+.--.++--+.-.+..+++++.+.+-..+
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 22222222222 0010 0 111222222233333344334445556667788999999888888
Q ss_pred HHHHHHHHHHHHHH
Q 004754 140 TGCVGMFLAYCMVF 153 (732)
Q Consensus 140 ~~~~G~aIg~l~~l 153 (732)
+.+.|.+++....+
T Consensus 162 G~~~Gyfls~tvFl 175 (544)
T PF13000_consen 162 GQTAGYFLSFTVFL 175 (544)
T ss_pred HhhhhHHHHHHHHH
Confidence 88888888854433
No 277
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.41 E-value=0.45 Score=46.98 Aligned_cols=105 Identities=10% Similarity=-0.069 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHhhcccchhhhh
Q 004754 562 GITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFCCFVMGFGPIPNIL 641 (732)
Q Consensus 562 ~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (732)
.+......++.++++.+.+++|.|..++++.....+-....... +.+..+...++.+++.+..+.+.. .+
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~---------~~~~l~~~s~l~G~~~a~lW~aqg-~y 113 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP---------NSYTLYPASALLGFGAALLWTAQG-TY 113 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHhhhhHHhhHhhh-HH
Confidence 33445566677888899999999998888776665444433220 233444444555555555454443 45
Q ss_pred hccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHH
Q 004754 642 CSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVL 676 (732)
Q Consensus 642 ~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l 676 (732)
..+...++.+++..++...+...+.++|..+.-.+
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788888899999988888888777776655444
No 278
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.14 E-value=8.6 Score=44.69 Aligned_cols=143 Identities=10% Similarity=0.071 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004754 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~-~s~s~igll~Sif~I-G~~Ig~~~~g~LsDrfGrR~vLligllL~aIg 86 (732)
+.+++..++..+.... +-.+.+.+-+. ..+..+..+-+..-+ ++.+..++.+.+.+++-+.+++-+.+..+..+
T Consensus 30 lpl~Ll~f~I~~ny~~----lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~f 105 (509)
T COG3202 30 LPLALLFFCILFNYNL----LRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGF 105 (509)
T ss_pred HHHHHHHHHHHHHHHH----HHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 3344444444444333 34556666542 245667777777777 77888999999999999999998888888777
Q ss_pred HHHHHhh---------hh-----------------------HHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchhhhh
Q 004754 87 GLVMLWS---------PN-----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRGLL 133 (732)
Q Consensus 87 sll~a~a---------~s-----------------------~~~LiI~R~L~G~g~G~~~~-~~~alI~E~fP~~~Rg~~ 133 (732)
.+++++. ++ .|...+.-.+.=+-...... .......|.+..++-.+.
T Consensus 106 F~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRF 185 (509)
T COG3202 106 FALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRF 185 (509)
T ss_pred HHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Confidence 7777652 11 02222222222222223333 456778899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 004754 134 NTLPQFTGCVGMFLAYCMVFGM 155 (732)
Q Consensus 134 ~~l~~~~~~~G~aIg~l~~l~~ 155 (732)
.++++.+.+++..++.......
T Consensus 186 y~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 186 YPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986555443
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.68 E-value=1.6 Score=49.71 Aligned_cols=146 Identities=10% Similarity=0.072 Sum_probs=89.2
Q ss_pred cCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHH
Q 004754 549 LGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSVVHASISTVSVVLYFC 628 (732)
Q Consensus 549 l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (732)
.|++..+...-+..+.+=+.+...+....+.|.++.|++++.+.+..++..+++.+. -.+..+.+..+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~------------~sv~~mq~~q~ 102 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG------------TSVLAMQLMQF 102 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH------------CcHHHHHHHHH
Confidence 345555555555555666667777788889999999999988887777766665552 12223333333
Q ss_pred HHhhcccc--hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc--hhHHHHHHHHHHHHHHHHHHHhc
Q 004754 629 CFVMGFGP--IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG--LAGVFGMYAVVCVISWIFVFIKV 704 (732)
Q Consensus 629 ~~~~~~~~--~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g--~~~~f~~~~~~~~i~~i~~~~~~ 704 (732)
+|++.... ..+.++--..|++..-++.+.+.+..-+|.+++..++-.+....+ +.....+-.+...++ ++..+++
T Consensus 103 ~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a-~~~~~fL 181 (412)
T PF01770_consen 103 FYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA-LLIALFL 181 (412)
T ss_pred HHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-HHHHHHc
Confidence 33333222 223455566688888889999999998898888888877766433 333333333323333 3344456
Q ss_pred cCC
Q 004754 705 PET 707 (732)
Q Consensus 705 ~et 707 (732)
|..
T Consensus 182 P~~ 184 (412)
T PF01770_consen 182 PMP 184 (412)
T ss_pred CCC
Confidence 644
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.51 E-value=0.41 Score=54.20 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHH--HHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL--YFI 85 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL--~aI 85 (732)
.+-+++.++..+.-++.+.+.+..= .++.- ...+.-+...++.+|..++.--... +--|++.+...+- ..+
T Consensus 249 miPL~lVY~aEY~InqGv~~tl~fp-~~~~~--~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~ 321 (402)
T PF02487_consen 249 MIPLFLVYFAEYFINQGVAPTLLFP-NSFFS--PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLV 321 (402)
T ss_pred HHHHHHHHHHHHHHHhchHHHhcCC-ccCCC--HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHH
Confidence 3345566666666655555443211 11221 3456677777777776666332211 2224443333222 222
Q ss_pred HHH---HHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHH
Q 004754 86 GGL---VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (732)
Q Consensus 86 gsl---l~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l 153 (732)
..+ ..-+.+++|.+++..+..|+..|..++-....+.|-.|+++|..+++..+++-++|.+++.+...
T Consensus 322 ~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 322 FLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 222 23346899999999999999999999999999999999999999999999999999999865543
No 281
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.34 E-value=4 Score=47.54 Aligned_cols=142 Identities=11% Similarity=0.007 Sum_probs=84.9
Q ss_pred HHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcc---
Q 004754 535 QILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMG--- 611 (732)
Q Consensus 535 ~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~--- 611 (732)
.++.+..........|-.. ...+=.....-+.++...+-.++.++++|.++.-..+......+.++++...+..+
T Consensus 41 ~~lR~~KD~lvvt~~gae~--I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lh 118 (491)
T PF03219_consen 41 TILRDLKDTLVVTAQGAEV--IPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILH 118 (491)
T ss_pred HHHHHhcCeEEEecCChhH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcC
Confidence 3455555555444443332 22222222233445566677899999999998877776666666666554333111
Q ss_pred cch-----------h-hH-HHHH----HHHHHH--HHHhhcccc-hhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHh
Q 004754 612 SVV-----------H-AS-ISTV----SVVLYF--CCFVMGFGP-IPNILCSEIFPTRVRGICIAICALVFWIGDIIVTY 671 (732)
Q Consensus 612 ~~~-----------~-~~-~~~~----~~~~~~--~~~~~~~~~-~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~ 671 (732)
.+. + .+ +.++ ..++|. -.++....+ +-|.++.|+++.+.-.+-+++..+..++|.++++.
T Consensus 119 p~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~ 198 (491)
T PF03219_consen 119 PDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQ 198 (491)
T ss_pred CCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00 0000 111222 223222222 45889999999999999999999999999999999
Q ss_pred HHHHHHH
Q 004754 672 SLPVLLN 678 (732)
Q Consensus 672 ~~~~l~~ 678 (732)
+..++.+
T Consensus 199 ~~~~~~~ 205 (491)
T PF03219_consen 199 LTSYFSS 205 (491)
T ss_pred HHHHHHH
Confidence 9888877
No 282
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=94.30 E-value=14 Score=43.18 Aligned_cols=147 Identities=10% Similarity=0.091 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CchhHHHHHHHHHHH-HHHHHHHhHHHhhhhhCChHHHHHHHHHH
Q 004754 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLY 83 (732)
Q Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~-~s~s~igll~Sif~I-G~~Ig~~~~g~LsDrfGrR~vLligllL~ 83 (732)
.-.+.+++..++..+..+.. -.+.+.+=++ ..+..+..+-....+ +..+...+...+++++++.+++-+.+..+
T Consensus 24 ~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 33445555556655554442 2233222110 023444444443333 44566778899999999999888776666
Q ss_pred HHHHHHHHhh---------hh----------------------HHHHHHHHHHHHHHHhhHhH-HHHHHHHhcCCcchhh
Q 004754 84 FIGGLVMLWS---------PN----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRG 131 (732)
Q Consensus 84 aIgsll~a~a---------~s----------------------~~~LiI~R~L~G~g~G~~~~-~~~alI~E~fP~~~Rg 131 (732)
.....++++. ++ .|.+.+.-++.-+-.....+ ....+..|.++.++-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 6655555542 11 11222222222222222223 4578889999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Q 004754 132 LLNTLPQFTGCVGMFLAYCMVFGMS 156 (732)
Q Consensus 132 ~~~~l~~~~~~~G~aIg~l~~l~~~ 156 (732)
+..++...+.++|.+++........
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865554443
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.18 E-value=0.1 Score=59.58 Aligned_cols=163 Identities=18% Similarity=0.129 Sum_probs=90.0
Q ss_pred hhhcccchhhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 004754 500 KDLAEPGVKRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLM 579 (732)
Q Consensus 500 ~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~ 579 (732)
.+..++...+.++....+....|+. +..=..|+|.++.++|+.. ...+ .+-...-+.+++..++.|..+
T Consensus 23 ~~~~~ps~~~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvph---------k~~S-~iw~~gPi~G~~vQP~vG~~S 91 (498)
T KOG0637|consen 23 FDLSRPSRLRKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPH---------KWSS-IIWLCGPLSGLLVQPLVGSAS 91 (498)
T ss_pred ccccCCcchHHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCc---------cccc-ccccccccccceecccccccc
Confidence 3444444335666666666777775 3445667777888877653 2222 222334566777788899999
Q ss_pred hc----ccchhHHHhhHHHH-HHHHHHHHHHHHhh--c-ccchh----hHH--HHHHHHHHHHHHhhcccchhhhhhccC
Q 004754 580 DI----SGRRTLLLSTIPIL-ITSLVVLVLSSVIK--M-GSVVH----ASI--STVSVVLYFCCFVMGFGPIPNILCSEI 645 (732)
Q Consensus 580 d~----~grr~~~~~~~~~~-~i~~~~~~~~~~~~--~-~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e~ 645 (732)
|| +|||+..+.....+ .++++.+.....+. + ++... ..+ .++.+.+.-+......+|. -++.+++
T Consensus 92 Drc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl 170 (498)
T KOG0637|consen 92 DRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADL 170 (498)
T ss_pred cccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHh
Confidence 95 78887665554443 44444333322211 1 11111 011 1111112222222223333 3667888
Q ss_pred CCccchhh-HHHHHHHHHHHHHHHHHhHHH
Q 004754 646 FPTRVRGI-CIAICALVFWIGDIIVTYSLP 674 (732)
Q Consensus 646 ~p~~~r~~-~~gi~~~~~~ig~~i~~~~~~ 674 (732)
...+.+.+ +.+...+...+|+.++=...+
T Consensus 171 ~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 171 ARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred ccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 88877777 999999999888887744443
No 284
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.99 E-value=0.29 Score=53.90 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=75.7
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHhhcccc-hhhHHHHHHHHHHHHHHhhc-ccchhhhhhccCCCcc---chhhHHHHHHH
Q 004754 586 TLLLSTIPILITSLVVLVLSSVIKMGSV-VHASISTVSVVLYFCCFVMG-FGPIPNILCSEIFPTR---VRGICIAICAL 660 (732)
Q Consensus 586 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~---~r~~~~gi~~~ 660 (732)
++++.+.++..++.+++.+......... .......+.+.+ ...|.| +=|...++..|.++++ .|..++.....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~l--ia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~ 79 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLAL--IAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYW 79 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHH--HHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHH--HHhccccccccHHHHHHHHhcccchhhhhhhHHHHHH
Confidence 4667778888888888777655433211 111222233333 333333 3355567778888765 35567777888
Q ss_pred HHHHHHHHHHhHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHh
Q 004754 661 VFWIGDIIVTYSLPVLLNSVGLAGVFGMYAVVCVISWIFVFIK 703 (732)
Q Consensus 661 ~~~ig~~i~~~~~~~l~~~~g~~~~f~~~~~~~~i~~i~~~~~ 703 (732)
+.++|.++++...+++-+..||...|++.++..+++.+.++.-
T Consensus 80 ~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 80 GINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 8999999999999999999999999999888888886655543
No 285
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=92.29 E-value=0.039 Score=64.62 Aligned_cols=131 Identities=14% Similarity=0.042 Sum_probs=1.4
Q ss_pred hcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhh--c--c--c-------
Q 004754 546 LSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIK--M--G--S------- 612 (732)
Q Consensus 546 ~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~--~--~--~------- 612 (732)
-+++++++++. .++...+-++.++..++..++..|..|-+.+-.+.+++.++.+++++=.... . . .
T Consensus 30 ErRF~l~S~~~-G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~ 108 (539)
T PF03137_consen 30 ERRFGLSSSQS-GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSS 108 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccc
Confidence 35788998654 4555668899999999899999998888888888888888888877521110 0 0 0
Q ss_pred -------------------------chhhHHHHHHHHHHHHHHhhcccc---hhhhhhccCCCccchhhHHHHHHHHHHH
Q 004754 613 -------------------------VVHASISTVSVVLYFCCFVMGFGP---IPNILCSEIFPTRVRGICIAICALVFWI 664 (732)
Q Consensus 613 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~gi~~~~~~i 664 (732)
....+..+..+++-.+..|+|..| +..+|+-|.++++.-+..+|+..++..+
T Consensus 109 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~l 188 (539)
T PF03137_consen 109 ISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSIL 188 (539)
T ss_dssp -------------------------------------------SSS----------------------------------
T ss_pred cccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhc
Confidence 000111122223333344444433 4457888999999999999999998888
Q ss_pred HHHHHHhHHHHHH
Q 004754 665 GDIIVTYSLPVLL 677 (732)
Q Consensus 665 g~~i~~~~~~~l~ 677 (732)
|-++|=.+++..+
T Consensus 189 GPa~Gf~lg~~~L 201 (539)
T PF03137_consen 189 GPALGFLLGSFCL 201 (539)
T ss_dssp -------------
T ss_pred cHHHHHHHHHHHH
Confidence 8877766666655
No 286
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=89.30 E-value=3.5 Score=50.06 Aligned_cols=163 Identities=13% Similarity=0.039 Sum_probs=103.7
Q ss_pred cccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHh---------h----ccc-
Q 004754 547 SNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVI---------K----MGS- 612 (732)
Q Consensus 547 ~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~---------~----~~~- 612 (732)
+++++++.+ +.++...+-++.++..+...+..-|.-|-+++-.+..++.++.+++.+--.. . ...
T Consensus 125 rRF~i~Ss~-sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~ 203 (735)
T KOG3626|consen 125 RRFKISSSQ-SGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENP 203 (735)
T ss_pred hhcCCCCCc-ceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCC
Confidence 367888865 5555566788888888888899999988899999999998888887652111 0 000
Q ss_pred --------------------------chhhHHHHHHHHHHHHHHhhcccc---hhhhhhccCCCccchhhHHHHHHHHHH
Q 004754 613 --------------------------VVHASISTVSVVLYFCCFVMGFGP---IPNILCSEIFPTRVRGICIAICALVFW 663 (732)
Q Consensus 613 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~gi~~~~~~ 663 (732)
....+...+.+++-....|+|-.| +...|+-|-.-++.-+..+|+...+.-
T Consensus 204 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~ 283 (735)
T KOG3626|consen 204 SSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAI 283 (735)
T ss_pred ccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHH
Confidence 011111223333333444444433 445787888888888889999988888
Q ss_pred HHHHHHHhHHHHHHHhh------------------c-hhHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004754 664 IGDIIVTYSLPVLLNSV------------------G-LAGVFGMYAVVCVISWIFVFIKVPETKGMP 711 (732)
Q Consensus 664 ig~~i~~~~~~~l~~~~------------------g-~~~~f~~~~~~~~i~~i~~~~~~~et~~~~ 711 (732)
+|-++|=.+++++.+.+ | |+.-|++.+.+.++..+. +++.|.+..++
T Consensus 284 lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p-~f~fPk~lp~~ 349 (735)
T KOG3626|consen 284 LGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP-LFFFPKELPKS 349 (735)
T ss_pred hhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH-HHhCcccCccc
Confidence 88888777777765421 2 344455555555555444 44567655443
No 287
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=84.73 E-value=89 Score=36.67 Aligned_cols=112 Identities=8% Similarity=-0.068 Sum_probs=70.5
Q ss_pred HHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhccc-------------chh-h---------HHHHHHH
Q 004754 567 LMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGS-------------VVH-A---------SISTVSV 623 (732)
Q Consensus 567 ~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------~~~-~---------~~~~~~~ 623 (732)
++++..++..++.++..|.++..+.+......++++++..++..+. ... . .++....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 5566677777888888888887766666665555555543321100 000 0 0111122
Q ss_pred HHHHHHHhhccc-chhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhHHHHHHH
Q 004754 624 VLYFCCFVMGFG-PIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYSLPVLLN 678 (732)
Q Consensus 624 ~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~ 678 (732)
.+..-.++.... -+.|....|++..+.-.+-+++.++..+++.++++.+..++..
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 222222322222 2456788999999999999999999999999999998888775
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=83.60 E-value=7.2 Score=34.82 Aligned_cols=67 Identities=22% Similarity=0.204 Sum_probs=51.4
Q ss_pred HHHhHHHHHHHhcccchhcccCCChhhHHHHHHHHHHHHHHHHHHHHhhhhhcccchhHHHhhHHHHHHHHHHHHHH
Q 004754 529 VLYYTPQILEQAGVGVLLSNLGISSASASLLISGITTLLMLPSIAVAMRLMDISGRRTLLLSTIPILITSLVVLVLS 605 (732)
Q Consensus 529 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~~~~~i~~~~~~~~ 605 (732)
+.-.+|.+.++.++ +. ..+..+.....++-++|.+...++.++.++++.+..++....++.+.+.+.
T Consensus 11 yTplLP~M~~~~~l---------s~-~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 11 YTPLLPLMQADGGL---------SL-SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHhHhHHHHHhcCC---------CH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567777776554 44 445555667889999999999999999888888888888888888877773
No 289
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=82.79 E-value=37 Score=40.42 Aligned_cols=150 Identities=18% Similarity=0.148 Sum_probs=90.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhhhhhc-ccchhHHHhhHHHHHHHHHHHHHHHHhhccc-----------chhhHHH
Q 004754 552 SSASASLLISGITTLLMLPSIAVAMRLMDI-SGRRTLLLSTIPILITSLVVLVLSSVIKMGS-----------VVHASIS 619 (732)
Q Consensus 552 ~~~~~~~~~~~i~~~~~l~~~~i~g~l~d~-~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~ 619 (732)
+...++...+. .........+++++++|- +||-+++.++..+..++++++.+......-. .-...-.
T Consensus 71 ~~~~aa~~v~~-f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~ 149 (571)
T KOG1237|consen 71 SGGGAANNVNA-FGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSK 149 (571)
T ss_pred chHHHHHHHHH-HhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcch
Confidence 33344444443 344455567889999995 6999999998888888877776654432110 0011112
Q ss_pred HHHHHHHHHHHhhc-----ccchhhhhhccCCC----ccchh--hHHHHHHHHHHHHHHHHHhHHHHHHHhhchhHHHHH
Q 004754 620 TVSVVLYFCCFVMG-----FGPIPNILCSEIFP----TRVRG--ICIAICALVFWIGDIIVTYSLPVLLNSVGLAGVFGM 688 (732)
Q Consensus 620 ~~~~~~~~~~~~~~-----~~~~~~~~~~e~~p----~~~r~--~~~gi~~~~~~ig~~i~~~~~~~l~~~~g~~~~f~~ 688 (732)
....++|...+-.+ .-+....+-+|-++ .+.+. .-+.......++|.++...+..+.-+..||...|.+
T Consensus 150 ~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i 229 (571)
T KOG1237|consen 150 LQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGI 229 (571)
T ss_pred HHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccH
Confidence 22233333333222 22333455566666 22233 445555566677888888877777788999999998
Q ss_pred HHHHHHHHHHHHHH
Q 004754 689 YAVVCVISWIFVFI 702 (732)
Q Consensus 689 ~~~~~~i~~i~~~~ 702 (732)
..++.+++.++++.
T Consensus 230 ~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 230 PTVLNALAILIFLP 243 (571)
T ss_pred HHHHHHHHHHHHHc
Confidence 88888777665544
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.06 E-value=14 Score=42.31 Aligned_cols=59 Identities=22% Similarity=0.239 Sum_probs=52.1
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 94 ~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
++-+..++.-++.|+..|-.......+..+..++++|..+..+..++..+|..+|....
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788899999999999999999999999999999999999999999999985543
No 291
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=79.52 E-value=64 Score=36.91 Aligned_cols=28 Identities=7% Similarity=-0.162 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhhhhHHHHHhHHHHHHH
Q 004754 512 MVGVGIQILQQLSGINGVLYYTPQILEQ 539 (732)
Q Consensus 512 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 539 (732)
++.+++...-.+.-+|.+..-.+.+.+.
T Consensus 20 ~~i~~llGiG~LlpWN~fiTa~~y~~~~ 47 (406)
T KOG1479|consen 20 YLIFLLLGIGTLLPWNMFITASDYYYYR 47 (406)
T ss_pred HHHHHHHhcccccchHhhhccHHHHHhh
Confidence 3333333333333456566656655554
No 292
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=74.15 E-value=38 Score=38.69 Aligned_cols=84 Identities=20% Similarity=0.302 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHhcccchhcccCCChhhHHH--HHHHHHHHHHHHHHHHHhhhhh-----
Q 004754 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQAGVGVLLSNLGISSASASL--LISGITTLLMLPSIAVAMRLMD----- 580 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~--~~~~i~~~~~l~~~~i~g~l~d----- 580 (732)
++.+++..+++..+..- .++..-.|.+++.-+.+. ++.+. +....+.+ -++...++|
T Consensus 30 ~~~illLl~LYllQGiP--~GL~~~iP~lL~ak~vSy---------t~~a~fS~ay~P~sL-----KllWaPiVDs~y~k 93 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIP--LGLIGAIPLLLQAKGVSY---------TSQAIFSFAYWPFSL-----KLLWAPIVDSVYSK 93 (510)
T ss_pred hhhHHHHHHHHHHcCCc--hhHhhhhHHHhcCCCcch---------hhhhhhhhhhhHHHH-----HHHHHhhhHHHHHH
Confidence 44555666666555442 344447888888554432 11111 11112222 234445666
Q ss_pred cccchhHHHhhHHHHHHHHHHHHHHHHh
Q 004754 581 ISGRRTLLLSTIPILITSLVVLVLSSVI 608 (732)
Q Consensus 581 ~~grr~~~~~~~~~~~i~~~~~~~~~~~ 608 (732)
|+|||+..++-.- ..+++++..+.+.+
T Consensus 94 ~~GrrksWvvp~q-~llG~~mllLs~~v 120 (510)
T KOG3574|consen 94 RFGRRKSWVVPCQ-YLLGLFMLLLSYLV 120 (510)
T ss_pred hhccccceeeehH-HHHHHHHHHHhhCC
Confidence 9999987665432 23344444554444
No 293
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=72.97 E-value=1.1 Score=48.39 Aligned_cols=111 Identities=9% Similarity=-0.008 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcc-cchhHHHhhHHHHHHHHHHHHHHHHh-hcc--c--chhhHHHHHHHHHHHHHHhhc
Q 004754 560 ISGITTLLMLPSIAVAMRLMDIS-GRRTLLLSTIPILITSLVVLVLSSVI-KMG--S--VVHASISTVSVVLYFCCFVMG 633 (732)
Q Consensus 560 ~~~i~~~~~l~~~~i~g~l~d~~-grr~~~~~~~~~~~i~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~~~ 633 (732)
...++.++.++|..+..+..-+. .+|.+.. ....=.+.+.++.+.... ..+ . ..+.+..++.+++++...| -
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~-~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG-y 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWI-LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG-Y 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHH-HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc-h
Confidence 34567889999998888753221 2343332 222222222222222111 100 0 0011222222222222222 2
Q ss_pred ccchhhhhhccCCCccchhhHHHHHHHHHHHHHHHHHhH
Q 004754 634 FGPIPNILCSEIFPTRVRGICIAICALVFWIGDIIVTYS 672 (732)
Q Consensus 634 ~~~~~~~~~~e~~p~~~r~~~~gi~~~~~~ig~~i~~~~ 672 (732)
..++...+.++..+++.|..+-.+...+-.+|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888888777777666666666665543
No 294
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=72.62 E-value=35 Score=37.97 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC
Q 004754 46 GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (732)
Q Consensus 46 gll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~f 125 (732)
|.+.-.-.+-..+.-+.+....||+---.=..+..++.+.+.++.+++.+.++-+++-.+..++.|..-....++-+.+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y- 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY- 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC-
Confidence 3344444455666677777888886533333444566777788888999999888888888888777655555444333
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcc
Q 004754 126 PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (732)
Q Consensus 126 P~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~~l~~~~~~ 186 (732)
++. ..+-++.+.+....+|..--.........+-|.+.++...+..+.+...++.++
T Consensus 144 ~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 144 PSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 321 222333333333444422221221112345566666665555554443333343
No 295
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.53 E-value=43 Score=39.36 Aligned_cols=23 Identities=22% Similarity=0.192 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHhhhhhcccch
Q 004754 563 ITTLLMLPSIAVAMRLMDISGRR 585 (732)
Q Consensus 563 i~~~~~l~~~~i~g~l~d~~grr 585 (732)
.+.+.+.++..+++++-..+|.|
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCC
Confidence 45566666666666666666543
No 296
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=70.26 E-value=27 Score=39.05 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=55.7
Q ss_pred HHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004754 53 LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 53 ~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP 126 (732)
.+..+.++++.+.+..++|-|.+++++......... .=+-+.+..++.+-.+.|++.+..+..--+++++...
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 344566667777999999999999988877766433 2334678899999999999999988877777766653
No 297
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=64.91 E-value=2.5e+02 Score=31.97 Aligned_cols=96 Identities=15% Similarity=0.034 Sum_probs=62.6
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHH----HHHHHHHHHHHHH-Hh----hhhHH
Q 004754 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI----VSSVLYFIGGLVM-LW----SPNVY 97 (732)
Q Consensus 27 ~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLl----igllL~aIgsll~-a~----a~s~~ 97 (732)
.++..+...+.- ...-+++++.+.+.....+|+..+-++.|.--.-+.+. ++++.-.-..+++ .| .++-+
T Consensus 28 lal~tLatyLlG-~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~ 106 (508)
T COG4262 28 LALGTLATYLLG-GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRL 106 (508)
T ss_pred HHHHHHHHHhcC-CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHH
Confidence 344456666542 15678999999999999999988887776433222222 2222211111121 22 35678
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHh
Q 004754 98 VLLLARLLDGFGIGLAVTLVPIYISE 123 (732)
Q Consensus 98 ~LiI~R~L~G~g~G~~~~~~~alI~E 123 (732)
.+.+.-++.|.-.|+-.|..+.++..
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 88888999999999999999888876
No 298
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=63.33 E-value=84 Score=34.52 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhhCCh--HHHHHHHHHHHHHHHHHHh----hh---hHHHHHHHHHHHHHHHhhHh
Q 004754 44 IEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW----SP---NVYVLLLARLLDGFGIGLAV 114 (732)
Q Consensus 44 ~igll~Sif~IG~~Ig~~~~g~LsDrfGrR--~vLligllL~aIgsll~a~----a~---s~~~LiI~R~L~G~g~G~~~ 114 (732)
-.|.+++.+++..++|+-+..++..|-..| +...+..++.++...+... +| +...-+++-.+.-.+.|..+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfw 362 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFW 362 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcc
Confidence 468899999999999998888887765543 3333333333333333222 11 22233455556667788899
Q ss_pred HHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 004754 115 TLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (732)
Q Consensus 115 ~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~~l~~i~~ 178 (732)
|....+=.++.|.+.|...+.++-+-...=..++ ...........+-|.+|.++...-++..
T Consensus 363 PSimkmRsqyIPEearstimNfFRvPLnifvClv--Lynlh~~~~p~~tr~mf~icS~~~~~a~ 424 (454)
T KOG4332|consen 363 PSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLV--LYNLHVDAFPTTTRNMFGICSAFLFVAS 424 (454)
T ss_pred hHHHHHHHhhCCHHHHhhhhhheechhhHhhhhh--heecccccCccccchhhhhhHHHHHHHH
Confidence 9999999999999999988777544332222221 0000011123466788888777655543
No 299
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=58.87 E-value=56 Score=38.44 Aligned_cols=31 Identities=23% Similarity=0.079 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchhHHHhhH
Q 004754 562 GITTLLMLPSIAVAMRLMDISGRRTLLLSTI 592 (732)
Q Consensus 562 ~i~~~~~l~~~~i~g~l~d~~grr~~~~~~~ 592 (732)
..+++=.+-+.++=.....|+||||..++-+
T Consensus 47 ~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~ 77 (544)
T PF13000_consen 47 YPFSLKLLWAPIVDSVYSKRIGRRKSWIIPI 77 (544)
T ss_pred chhHHHHhhhhhhhhhcccccCCcchhhhHH
Confidence 3445545555556666677899998877643
No 300
>PRK10263 DNA translocase FtsK; Provisional
Probab=58.16 E-value=1e+02 Score=40.18 Aligned_cols=20 Identities=30% Similarity=0.212 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhhhhhccc
Q 004754 564 TTLLMLPSIAVAMRLMDISG 583 (732)
Q Consensus 564 ~~~~~l~~~~i~g~l~d~~g 583 (732)
...++.+|..++..+..-+|
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 44555666666666655556
No 301
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=58.13 E-value=28 Score=34.55 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=50.7
Q ss_pred hhhhcccchhHHHhhHHHHHHHHHHHHHHHHhhcccc--hhhHHHHHHHHHHHHHHhhcccchhhhhhccCCCccchhhH
Q 004754 577 RLMDISGRRTLLLSTIPILITSLVVLVLSSVIKMGSV--VHASISTVSVVLYFCCFVMGFGPIPNILCSEIFPTRVRGIC 654 (732)
Q Consensus 577 ~l~d~~grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~ 654 (732)
.++||+-||-.+.++++.. +++..+.++++...... ...++. ++.-+.+|+.+.-.+.|.+.+-...++..|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~-lG~~~f~~~y~l~~~~~~dvP~~~~---~~~S~~~Fg~gllGisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTA-LGVAVFVVFYYLKSRQIVDVPPWAV---LLVSLVFFGLGLLGISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHHhccccccCchHH---HHHHHHHHHHHHHhhhhhhcccccCCCCCCCc
Confidence 4577888887777766654 44444555444433221 122222 22233344444445555555666678888999
Q ss_pred HHHHHHHHHHHHHH
Q 004754 655 IAICALVFWIGDII 668 (732)
Q Consensus 655 ~gi~~~~~~ig~~i 668 (732)
.|+-.+-.+++.+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99888877776544
No 302
>PHA03239 envelope glycoprotein M; Provisional
Probab=49.70 E-value=1.6e+02 Score=34.05 Aligned_cols=26 Identities=31% Similarity=0.332 Sum_probs=15.5
Q ss_pred CCCCcCCCCCCCCCcCCccccccccc
Q 004754 344 EYPSDAAGGDSDDNLQSPLISRQTTS 369 (732)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (732)
.+++++..-+.+||.+-+..+||.|.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (429)
T PHA03239 398 ARPLDAYADDPRDNIPFERRSREGDA 423 (429)
T ss_pred CCCcccccCCccccCchhhccccCcc
Confidence 34555556666777666666665543
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.08 E-value=6.8 Score=42.42 Aligned_cols=104 Identities=20% Similarity=0.193 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHH---HHHHH----------HhhhhHHHHHHHHHHHHHHHhh
Q 004754 47 LIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFI---GGLVM----------LWSPNVYVLLLARLLDGFGIGL 112 (732)
Q Consensus 47 ll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aI---gsll~----------a~a~s~~~LiI~R~L~G~g~G~ 112 (732)
.+..+|.++-.+|..+.++.-=+- .+|.++ +..++-.+ ..++| .+.++-+..++.-++.|+..|-
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678888888887776542110 233333 33222221 11222 1234557778889999999999
Q ss_pred HhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHH
Q 004754 113 AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (732)
Q Consensus 113 ~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~ 151 (732)
.......+..+..++++|..+..+..++..+|..+|...
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888444
No 304
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=46.74 E-value=1.8e+02 Score=32.39 Aligned_cols=14 Identities=29% Similarity=0.181 Sum_probs=7.5
Q ss_pred hhhHHHHHHHHHHH
Q 004754 507 VKRALMVGVGIQIL 520 (732)
Q Consensus 507 ~~~~~~~~~~~~~~ 520 (732)
+.+..++++++...
T Consensus 131 y~~~~~~gv~i~i~ 144 (334)
T PF06027_consen 131 YSWFHILGVLICIA 144 (334)
T ss_pred hhHHHHHHHHHHHh
Confidence 45555566655443
No 305
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=46.12 E-value=6.7 Score=42.27 Aligned_cols=12 Identities=17% Similarity=0.548 Sum_probs=0.0
Q ss_pred HHHHHhccCCCC
Q 004754 698 IFVFIKVPETKG 709 (732)
Q Consensus 698 i~~~~~~~et~~ 709 (732)
+++++++.+++.
T Consensus 179 iLIWlY~H~~~~ 190 (381)
T PF05297_consen 179 ILIWLYVHDQRH 190 (381)
T ss_dssp ------------
T ss_pred HHHHHHhcCCCC
Confidence 455666666664
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.78 E-value=41 Score=31.52 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=29.4
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHhHHHHHHHhhc
Q 004754 647 PTRVRGICIAICALVFWIGDIIVTYSLPVLLNSVG 681 (732)
Q Consensus 647 p~~~r~~~~gi~~~~~~ig~~i~~~~~~~l~~~~g 681 (732)
.++.++.+.++-...-.+++++.....||+++.+-
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567888888888889999999999999999863
No 307
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=41.63 E-value=82 Score=35.19 Aligned_cols=140 Identities=16% Similarity=0.258 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChH-HHHH-----H
Q 004754 7 VAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRP-MLIV-----S 79 (732)
Q Consensus 7 v~~~~~~~~~~~~~~~~~~~~~~~~-I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~-vLli-----g 79 (732)
..+=++..++..++-++.....+-. =...+.++ ..++.=|....+.+|..++ +-+-++=+-+ ...+ -
T Consensus 252 ~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls-~~sqYRwyqvlYQlGVFiS-----RSS~~~~~~p~l~~LailQ~v 325 (409)
T KOG3880|consen 252 YMVPLALVYFAEYFINQGLAELLLFPCSHGFSLS-KDSQYRWYQVLYQLGVFIS-----RSSINLFTMPYLWLLAILQFV 325 (409)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhEEeccccCCccc-hhhcchhhheeeeeeEEEE-----eccceEEechHHHHHHHHHHH
Confidence 4445566666666666655543211 12333331 2345667777777665332 1122221222 1111 1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHH
Q 004754 80 SVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (732)
Q Consensus 80 llL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~ 152 (732)
.+++.+.-.+..+.|+++..++.-+.-|+-.|..++-..--+.+-.++++|-.+++.....-++|..++.++.
T Consensus 326 Nl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 2223333444456789999999999999999999998888888888889999999999999999999885443
No 308
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=39.84 E-value=3e+02 Score=29.74 Aligned_cols=56 Identities=18% Similarity=0.220 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHh
Q 004754 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (732)
Q Consensus 99 LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l 157 (732)
.-..|.+.|+-.= .+...++++.-.||++ .....+-....++|..++..+..+..+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~--~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRK--HDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCc--CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567888887653 3466788888899844 334556666777777776555555544
No 309
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=38.73 E-value=6.6e+02 Score=31.02 Aligned_cols=25 Identities=28% Similarity=0.262 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcc
Q 004754 558 LLISGITTLLMLPSIAVAMRLMDIS 582 (732)
Q Consensus 558 ~~~~~i~~~~~l~~~~i~g~l~d~~ 582 (732)
.+.+.+..+.++.+.++...++|++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~V 184 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKV 184 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556777788888999999986
No 310
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.68 E-value=98 Score=29.11 Aligned_cols=40 Identities=18% Similarity=0.266 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhh-CChHHHHHHHHHHHHH
Q 004754 47 LIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIG 86 (732)
Q Consensus 47 ll~Sif~IG~~Ig~~~~g~LsDrf-GrR~vLligllL~aIg 86 (732)
.-.+.=+++..+.....|++.||| |.+|..++..++.+.+
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 344555666777777788888886 5666655555444443
No 311
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=37.50 E-value=4.5e+02 Score=26.59 Aligned_cols=63 Identities=17% Similarity=0.141 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhHHHhh---hhhCChHHHHHHHHHHHHHHHHHHh----hhh----HHHHHHHHHHHHHH
Q 004754 47 LIVAMSLIGATCITTCSGAIA---DWLGRRPMLIVSSVLYFIGGLVMLW----SPN----VYVLLLARLLDGFG 109 (732)
Q Consensus 47 ll~Sif~IG~~Ig~~~~g~Ls---DrfGrR~vLligllL~aIgsll~a~----a~s----~~~LiI~R~L~G~g 109 (732)
+......+++.+|..+++.+. .+..+|+.....+++.++..++..+ .++ +....+.-+.+|+=
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Q 123 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQ 123 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 334445556666677777762 3344444444444444333333322 233 44444445555553
No 312
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=34.12 E-value=3.6e+02 Score=28.75 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=36.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 004754 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (732)
Q Consensus 92 ~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg~l~~l~~~l~~~~~Wr~~~~i~~ 171 (732)
++.|...+..+-...|+.... ....-.+....| +|.....+...++++|..+.....-....+-..-|.++++...
T Consensus 30 LS~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~~~nl~~il~~~~~~v~~yv~ 105 (249)
T PF10225_consen 30 LSRSVLFYYSSGISLGVLASL--LILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQLWENLQSILEEYRIYVLGYVL 105 (249)
T ss_pred hccChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555543222 233345678888 3333333333334555443322221111111123555555555
Q ss_pred HHHHHHH
Q 004754 172 IPSLIYF 178 (732)
Q Consensus 172 ~l~~i~~ 178 (732)
+.+++..
T Consensus 106 ~~G~vsf 112 (249)
T PF10225_consen 106 VVGLVSF 112 (249)
T ss_pred HHHHHHH
Confidence 5555443
No 313
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=33.73 E-value=1.2e+02 Score=34.46 Aligned_cols=96 Identities=19% Similarity=0.192 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhhCChH--HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 004754 44 IEGLIVAMSLIGATCITTCSGAIADWLGRRP--MLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI 121 (732)
Q Consensus 44 ~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~--vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI 121 (732)
--|..-++..+..+++.+..|.+.-.+.|.. .+.++.+..+...+++..+.++|...++-.+.+.-.....++...-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 3456667777778899999999987777653 44455555666666777788888888888888777777778888888
Q ss_pred HhcCCcchhhhhhhHHHH
Q 004754 122 SETAPPEIRGLLNTLPQF 139 (732)
Q Consensus 122 ~E~fP~~~Rg~~~~l~~~ 139 (732)
++-...+.-|+..|+..+
T Consensus 352 A~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHhhhhhhheeeeehHHH
Confidence 888888888888887543
No 314
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=33.60 E-value=4.6e+02 Score=29.81 Aligned_cols=36 Identities=8% Similarity=0.167 Sum_probs=17.0
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP 126 (732)
++++|+.....--.+..+..=...+..+-++.|.+=
T Consensus 229 ~~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L 264 (374)
T PF01528_consen 229 AIGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVL 264 (374)
T ss_pred HHhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666544433333334333344555555555543
No 315
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=33.55 E-value=4.8e+02 Score=28.76 Aligned_cols=25 Identities=20% Similarity=0.127 Sum_probs=13.9
Q ss_pred ccchhHHHhhHHHHHHHHHHHHHHH
Q 004754 582 SGRRTLLLSTIPILITSLVVLVLSS 606 (732)
Q Consensus 582 ~grr~~~~~~~~~~~i~~~~~~~~~ 606 (732)
+|.++.=+.+..+..+.+++..++.
T Consensus 84 fGy~R~eiLaa~~nav~Li~~s~~I 108 (296)
T COG1230 84 FGYKRLEILAAFLNALLLIVVSLLI 108 (296)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4656665555555555555555443
No 316
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=33.45 E-value=2.7e+02 Score=32.62 Aligned_cols=21 Identities=10% Similarity=0.214 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHhCCCCchhHHH
Q 004754 24 TIAGAVLYIKREFHLETEPTIEG 46 (732)
Q Consensus 24 ~~~~~~~~I~~dlgl~~s~s~ig 46 (732)
.+.|.+.-|.+.+++ +..-.|
T Consensus 78 fFVPSL~vItEkL~i--SdDVAG 98 (588)
T KOG1307|consen 78 FFVPSLDVITEKLGI--SDDVAG 98 (588)
T ss_pred cccccHHHHHHHhcC--cccccc
Confidence 345667778899998 444443
No 317
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.08 E-value=7.5e+02 Score=27.21 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=7.4
Q ss_pred HHHHHhHHHhhhhhC
Q 004754 57 TCITTCSGAIADWLG 71 (732)
Q Consensus 57 ~Ig~~~~g~LsDrfG 71 (732)
++..+..|++..|+|
T Consensus 9 i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 9 IFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHhC
Confidence 334444555555554
No 318
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=30.52 E-value=2.4e+02 Score=31.06 Aligned_cols=12 Identities=17% Similarity=-0.050 Sum_probs=5.8
Q ss_pred HHHHHhhhhhcc
Q 004754 571 SIAVAMRLMDIS 582 (732)
Q Consensus 571 ~~~i~g~l~d~~ 582 (732)
..++.|++.-|.
T Consensus 11 ~ii~~G~~~~~~ 22 (385)
T PF03547_consen 11 LIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHh
Confidence 334445555544
No 319
>PF12670 DUF3792: Protein of unknown function (DUF3792); InterPro: IPR023804 Members of this family of strongly hydrophobic putative transmembrane protein average about 125 amino acids in length and occur mostly, but not exclusively, in the Firmicutes. Members are quite diverse in sequence. Their function is unknown.
Probab=28.38 E-value=4.9e+02 Score=24.24 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=14.7
Q ss_pred HHHHHHHHHHhhhhh-cccchhHHHhhHHH
Q 004754 566 LLMLPSIAVAMRLMD-ISGRRTLLLSTIPI 594 (732)
Q Consensus 566 ~~~l~~~~i~g~l~d-~~grr~~~~~~~~~ 594 (732)
+..+++.+++|+++- |.++|.++......
T Consensus 45 ~i~~ls~~~GG~~a~~~~~~kG~l~G~~~G 74 (116)
T PF12670_consen 45 IIYILSVFIGGFYAGRKAGSKGWLHGLLVG 74 (116)
T ss_pred HHHHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 333445555555554 45666665444433
No 320
>COG4769 Predicted membrane protein [Function unknown]
Probab=26.69 E-value=1.4e+02 Score=30.09 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=35.8
Q ss_pred HHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 004754 53 LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (732)
Q Consensus 53 ~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~a~s~~~LiI~R~L~G~g~ 110 (732)
.+..++.+...-++..++|+|.+-+++. +..-++.+|+.++++++++.|-..
T Consensus 83 sfaG~i~S~L~m~~l~~f~~k~~S~lgi------S~mGaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 83 SFAGAILSTLFMYFLYQFGPKYLSLLGI------SVMGAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHcCCceEeeeeh------hhHHHHHHhHHHHHHHHHHHhcch
Confidence 3444555566667788899887644443 233456889999999999987543
No 321
>PHA03242 envelope glycoprotein M; Provisional
Probab=25.04 E-value=7.5e+02 Score=28.68 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=14.7
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcC
Q 004754 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (732)
Q Consensus 91 a~a~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~f 125 (732)
++++|+.....--.+..+..=...++.+-++.|.+
T Consensus 243 ~~gNsF~v~~~~~v~~ai~~F~vL~ii~liv~E~v 277 (428)
T PHA03242 243 IAANNFHLSLPGTLVCLTAVFALLVVLLLVVVEGV 277 (428)
T ss_pred HHhcceeeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556543333333333333333344444455544
No 322
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=24.46 E-value=3.5e+02 Score=26.54 Aligned_cols=26 Identities=23% Similarity=0.240 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhhhCChH
Q 004754 49 VAMSLIGATCITTCSGAIADWLGRRP 74 (732)
Q Consensus 49 ~Sif~IG~~Ig~~~~g~LsDrfGrR~ 74 (732)
+.-|.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34567788888889999999988764
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=23.67 E-value=4.8e+02 Score=27.93 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHhhH
Q 004754 77 IVSSVLYFIGGLVML-WSPNVYVLLLARLLDGFGIGLA 113 (732)
Q Consensus 77 ligllL~aIgsll~a-~a~s~~~LiI~R~L~G~g~G~~ 113 (732)
+++++++++++++.. ..++.+.+.+.-++.+|+.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 344455544444444 3455566666666777666555
No 324
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=22.95 E-value=1.2e+03 Score=26.98 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=14.5
Q ss_pred HHhhHhHHHHHHHHhcCCcchhhhhh
Q 004754 109 GIGLAVTLVPIYISETAPPEIRGLLN 134 (732)
Q Consensus 109 g~G~~~~~~~alI~E~fP~~~Rg~~~ 134 (732)
+.+.+......|+.-....++||..+
T Consensus 358 Aa~a~i~Li~~Y~~~vl~~~k~~~~~ 383 (430)
T PF06123_consen 358 AALACIGLISLYLSSVLKSWKRGLIF 383 (430)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 33444445555666666666666444
No 325
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=22.76 E-value=1.2e+03 Score=26.62 Aligned_cols=120 Identities=15% Similarity=0.129 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHH
Q 004754 8 AIAAAIGNLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (732)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~I~-~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIg 86 (732)
.+.+.+-+++.-+.... +.|.+. ... + ++.+...+.+...+...+++++-+....+. -|-....+.....++
T Consensus 7 ~~~lglQh~l~~~~~~i---~~p~iv~~~~-l--~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 7 TLVLGLQHLLAMFGGTV---LVPLLVGLAP-L--SAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVS 79 (415)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHhccc-C--CHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHH
Confidence 34444444444333322 234333 344 6 788888999999999999999998877654 112222222211122
Q ss_pred HHH-HHhhhhHHHHHHHHHHHHHHHhhHhH----HHHHHHHhcCCcchhhhhh
Q 004754 87 GLV-MLWSPNVYVLLLARLLDGFGIGLAVT----LVPIYISETAPPEIRGLLN 134 (732)
Q Consensus 87 sll-~a~a~s~~~LiI~R~L~G~g~G~~~~----~~~alI~E~fP~~~Rg~~~ 134 (732)
... .....++.....+-++.|+....... ....++.+.+|+.-.+...
T Consensus 80 ~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 80 PMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 121 11222344444444455544433322 1234568889987766433
No 326
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=22.16 E-value=1.1e+03 Score=26.39 Aligned_cols=21 Identities=33% Similarity=0.254 Sum_probs=12.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHH
Q 004754 587 LLLSTIPILITSLVVLVLSSV 607 (732)
Q Consensus 587 ~~~~~~~~~~i~~~~~~~~~~ 607 (732)
.++.++..+++++++-.+...
T Consensus 80 ~ilf~tiGLiiGLlia~l~~~ 100 (356)
T COG4956 80 TILFGTIGLIIGLLIAVLLSS 100 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 466667777777666555433
No 327
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=22.12 E-value=3.1e+02 Score=27.36 Aligned_cols=52 Identities=25% Similarity=0.278 Sum_probs=34.8
Q ss_pred hhHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 94 ~s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
|++..++..-++.|+|.- .+.+-+++--+++++.|-..|+-.+-.+++.+.-
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 455566665666655532 3355556667777888999999888888877664
No 328
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=22.07 E-value=30 Score=37.55 Aligned_cols=18 Identities=11% Similarity=0.604 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 004754 685 VFGMYAVVCVISWIFVFI 702 (732)
Q Consensus 685 ~f~~~~~~~~i~~i~~~~ 702 (732)
.||++..+.++.|+++.=
T Consensus 170 L~WL~LFlaiLIWlY~H~ 187 (381)
T PF05297_consen 170 LYWLLLFLAILIWLYVHD 187 (381)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 566666677777887653
No 329
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=21.96 E-value=1.1e+03 Score=26.01 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=41.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhh---hCChHHHHH
Q 004754 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW---LGRRPMLIV 78 (732)
Q Consensus 2 r~~~~v~~~~~~~~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDr---fGrR~vLli 78 (732)
+|+.+..+++.+++++.-...+....-+.-+.+..++ .....+++.++..+. ++..-.++ ||.||.=++
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hm--l~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiL 92 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHM--LSDALALLLALIAIK------LARRPATKRFTFGYKRLEIL 92 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHH--HHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHH
Confidence 3455555566666666666556555556677777776 444444444433322 22333333 676666555
Q ss_pred HHHHHHHH
Q 004754 79 SSVLYFIG 86 (732)
Q Consensus 79 gllL~aIg 86 (732)
+.++.++.
T Consensus 93 aa~~nav~ 100 (296)
T COG1230 93 AAFLNALL 100 (296)
T ss_pred HHHHHHHH
Confidence 54444443
No 330
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.44 E-value=1.2e+03 Score=26.46 Aligned_cols=97 Identities=8% Similarity=0.021 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhh----hhhCChHHHHHHHHHHHHHHHHHHhhh--------
Q 004754 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIA----DWLGRRPMLIVSSVLYFIGGLVMLWSP-------- 94 (732)
Q Consensus 27 ~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~Ls----DrfGrR~vLligllL~aIgsll~a~a~-------- 94 (732)
..+|.+.+++.- .-+.-.++.....++.. +.++.-.+- -+...-+++++-+.+..+++++.++.-
T Consensus 32 v~lp~lv~elpe--~wslpsyl~vvVqla~l-gpLi~tllhk~~~~~i~~VPiif~ll~~a~v~~l~laflW~~ts~V~g 108 (439)
T KOG4255|consen 32 VELPLLVKELPE--GWSLPSYLSVVVQLANL-GPLIVTLLHKGAPGTIPTVPIIFVLLLLACVCQLGLAFLWHDTSPVFG 108 (439)
T ss_pred eehhHHHhhcCc--ccccchHHHHHHHHHcc-hhHHHHHHHhhCCCcCCCCCchhHHHHHHHHHHHHHHHHHhcchhhhc
Confidence 346788888764 33333444444433332 222221111 112233455555555566666665421
Q ss_pred --hHHHHHHHHHHHHHHHhhHhHHHHHHHHhcCC
Q 004754 95 --NVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (732)
Q Consensus 95 --s~~~LiI~R~L~G~g~G~~~~~~~alI~E~fP 126 (732)
.-+.++..-|...+......+...-++++.-|
T Consensus 109 ~~hS~afl~L~F~LAivdc~SnVtFLPFMs~lpp 142 (439)
T KOG4255|consen 109 ALHSWAFLSLLFGLAIVDCTSNVTFLPFMSQLPP 142 (439)
T ss_pred CcchHHHHHHHHHHHHHHhhccchhhhhhhhCCh
Confidence 12444444455555555555555556666555
No 331
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=21.08 E-value=1.3e+03 Score=26.69 Aligned_cols=21 Identities=19% Similarity=0.283 Sum_probs=10.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHh
Q 004754 72 RRPMLIVSSVLYFIGGLVMLW 92 (732)
Q Consensus 72 rR~vLligllL~aIgsll~a~ 92 (732)
+|+.+.++.++.++=.+++.+
T Consensus 377 ~k~~~~~~~~L~~LY~~Ly~l 397 (430)
T PF06123_consen 377 WKRGLIFAGLLAALYGFLYVL 397 (430)
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 445555555555444444443
No 332
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=20.82 E-value=1e+03 Score=25.95 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhh-hhCChHHHH----HHHHHHHHHHHHHH-hhh----hHHHHHHHHHHHHHHHhhHhH
Q 004754 46 GLIVAMSLIGATCITTCSGAIAD-WLGRRPMLI----VSSVLYFIGGLVML-WSP----NVYVLLLARLLDGFGIGLAVT 115 (732)
Q Consensus 46 gll~Sif~IG~~Ig~~~~g~LsD-rfGrR~vLl----igllL~aIgsll~a-~a~----s~~~LiI~R~L~G~g~G~~~~ 115 (732)
....-++..|+.+|....|.... .+-||+.+. ++.+++++..++.. ..+ ++..+.+.-|+.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34444555555566666666654 344665444 23344444433321 111 356677777888877645545
Q ss_pred HHHHHHHhcCCcchhhhhhhHHHHHHHHHHHHH
Q 004754 116 LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (732)
Q Consensus 116 ~~~alI~E~fP~~~Rg~~~~l~~~~~~~G~aIg 148 (732)
+....--|+ +...+-+..-+.+..+++|.++-
T Consensus 224 ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 224 VILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 444333333 22333444445555666666554
No 333
>PRK11715 inner membrane protein; Provisional
Probab=20.76 E-value=1.4e+03 Score=26.68 Aligned_cols=92 Identities=15% Similarity=0.029 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHHhHHHhhhhhCChHHHHHHHHHHHHHHHHHHh--
Q 004754 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-- 92 (732)
Q Consensus 15 ~~~~~~~~~~~~~~~~~I~~dlgl~~s~s~igll~Sif~IG~~Ig~~~~g~LsDrfGrR~vLligllL~aIgsll~a~-- 92 (732)
+++.|.....+-.++..+.++.+. ..+++.++......++......+- ++|+.+.++..+.++=.+++.+
T Consensus 334 YlLVGlAl~lFYLLLLSlSEHigF-----~~AYliAa~a~v~li~~Y~~~vl~---~~k~g~~~~~~L~~LYg~Ly~lLq 405 (436)
T PRK11715 334 YLLVGLALVLFYLLLLSLSEHIGF-----TLAYLIAALACVLLIGFYLSAVLR---SWKRGLLFAAALAALYGVLYGLLQ 405 (436)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhch-----HHHHHHHHHHHHHHHHHHHHHHHh---cchHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhHHHHHHHHHHHHHHHhhHh
Q 004754 93 SPNVYVLLLARLLDGFGIGLAV 114 (732)
Q Consensus 93 a~s~~~LiI~R~L~G~g~G~~~ 114 (732)
+.++..++-.-.+..+-....+
T Consensus 406 ~EDyALL~GSllLF~~La~vM~ 427 (436)
T PRK11715 406 SEDYALLLGSLLLFAVLALVMF 427 (436)
T ss_pred HhHHHHHHHHHHHHHHHHHHHh
No 334
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=20.07 E-value=1e+03 Score=25.52 Aligned_cols=33 Identities=12% Similarity=-0.003 Sum_probs=21.4
Q ss_pred hhHHHHHHHHHHHHHhhhhHHHHHhHHHHHHHh
Q 004754 508 KRALMVGVGIQILQQLSGINGVLYYTPQILEQA 540 (732)
Q Consensus 508 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 540 (732)
--.+++.+++.+.++|.|+.....+...+....
T Consensus 160 d~~F~~af~vAflFnwIGFlltycl~tT~agRY 192 (262)
T KOG4812|consen 160 DGIFMWAFIVAFLFNWIGFLLTYCLTTTHAGRY 192 (262)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhHhhhh
Confidence 345677788888888877665555555555443
Done!